1403820 0 total (QC-passed reads + QC-failed reads) 0 0 secondary 9596 0 supplementary 0 0 duplicates 1394437 0 mapped 99.33% N/A mapped % 1394224 0 paired in sequencing 697112 0 read1 697112 0 read2 1205196 0 properly paired 86.44% N/A properly paired % 1382228 0 with itself and mate mapped 2613 0 singletons 0.19% N/A singletons % 24370 0 with mate mapped to a different chr 15917 0 with mate mapped to a different chr (mapQ>=5)