987745 0 total (QC-passed reads + QC-failed reads) 0 0 secondary 6343 0 supplementary 0 0 duplicates 983701 0 mapped 99.59% N/A mapped % 981402 0 paired in sequencing 490701 0 read1 490701 0 read2 830254 0 properly paired 84.60% N/A properly paired % 975996 0 with itself and mate mapped 1362 0 singletons 0.14% N/A singletons % 14770 0 with mate mapped to a different chr 8793 0 with mate mapped to a different chr (mapQ>=5)