Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/AH/AH5 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/AH/AH5 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  24,072,031
 Normal Paired: 158,747 (0.66%)
 Chimeric Paired: 1,918 (0.01%)
 Chimeric Ambiguous: 28,180 (0.12%)
 Unmapped: 23,883,186 (99.22%)
 Ligation Motif Present: 237,068 (0.98%)
Alignable (Normal+Chimeric Paired): 160,665 (0.67%)
Unique Reads: 118,562 (0.49%)
PCR Duplicates: 41,456 (0.17%)
Optical Duplicates: 647 (0.00%)
Library Complexity Estimate: 252,801
Intra-fragment Reads: 36,235 (0.15% / 30.56%)
Below MAPQ Threshold: 73,438 (0.31% / 61.94%)
Hi-C Contacts: 8,889 (0.04% / 7.50%)
 Ligation Motif Present: 109  (0.00% / 0.09%)
 3' Bias (Long Range): 52% - 48%
 Pair Type %(L-I-O-R): 54% - 10% - 20% - 17%
Inter-chromosomal: 2,570  (0.01% / 2.17%)
Intra-chromosomal: 6,319  (0.03% / 5.33%)
Short Range (<20Kb): 6,121  (0.03% / 5.16%)
Long Range (>20Kb): 198  (0.00% / 0.17%)