Experiment description: NeuN_CK_KO_MboI
Sequenced Read Pairs:  562,031,769
 Normal Paired: 393,923,539 (70.09%)
 Chimeric Paired: 115,414,693 (20.54%)
 Chimeric Ambiguous: 33,076,502 (5.89%)
 Unmapped: 19,617,035 (3.49%)
 Ligation Motif Present: 205,111,438 (36.49%)
Alignable (Normal+Chimeric Paired): 509,338,232 (90.62%)
Unique Reads: 407,834,945 (72.56%)
PCR Duplicates: 101,508,745 (18.06%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,101,761,557
Intra-fragment Reads: 26,427,142 (4.70% / 6.48%)
Below MAPQ Threshold: 97,187,175 (17.29% / 23.83%)
Hi-C Contacts: 284,220,628 (50.57% / 69.69%)
 Ligation Motif Present: 79,778,632  (14.19% / 19.56%)
 3' Bias (Long Range): 70% - 30%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 46,703,991  (8.31% / 11.45%)
Intra-chromosomal: 237,516,637  (42.26% / 58.24%)
Short Range (<20Kb): 78,402,665  (13.95% / 19.22%)
Long Range (>20Kb): 159,113,837  (28.31% / 39.01%)