Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 4 threads; openjdk version "11.0.18" 2023-01-17; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g mm10 -d /storage/nyt/Projects/Juicer-Out/2023-05-18_BGI/Paul/CB2_unc -s DpnII -y /storage2/dreamworld/Databases/mm10_canonical/juicer.rs/mm10_canonical.rs.DpnII.txt -p /storage2/dreamworld/Databases/mm10_canonical/mm10_canonical.chrom.sizes -z /storage2/dreamworld/Databases/mm10_canonical/mm10_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 4                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  667
 Normal Paired: 380 (56.97%)
 Chimeric Paired: 235 (35.23%)
 Chimeric Ambiguous: 48 (7.20%)
 Unmapped: 4 (0.60%)
 Ligation Motif Present: 501 (75.11%)
Alignable (Normal+Chimeric Paired): 615 (92.20%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-05-24T02:15:07,611]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 345 (51.72%)
PCR Duplicates: 0 (0.00%)
Optical Duplicates: 270 (40.48%)
Library Complexity Estimate: 0
Intra-fragment Reads: 74 (11.09% / 21.45%)
Below MAPQ Threshold: 30 (4.50% / 8.70%)
Hi-C Contacts: 241 (36.13% / 69.86%)
 Ligation Motif Present: 206  (30.88% / 59.71%)
 3' Bias (Long Range): 70% - 30%
 Pair Type intra chrom %(L-I-O-R): 15% - 60% - 13% - 12%
 Pair Type inter chrom %(L-I-O-R): 25% - 31% - 19% - 25%
 DE: 34%
 Cis/all (FF and RR orient): 57.5%
Inter-chromosomal: 68  (10.19% / 19.71%)
Intra-chromosomal: 173  (25.94% / 50.14%)
Short Range (<20,000bp): 101  (15.14% / 29.28%)
Long Range (>20,000bp): 72  (10.79% / 20.87%)