Experiment description: Juicer version 1.6; BWA 0.7.18-r1243-dirty; 24 threads; openjdk version "17.0.8-internal" 2023-07-18; /home/torgunakov/Tools/juicer1.6_compact/scripts/juicer.sh -g unc5b_loc -d /beegfs/scratch/ws/ws1/torgunakov-workapr/Juicer-Out/2025-04-24-BGI/unc5b_loc/d4_liv -s DpnII -y /beegfs/scratch/ws/ws1/torgunakov-workapr/Databases/unc5b_loc_short_chr_name/juicer.rs/unc5b_loc_DpnII.txt -p /beegfs/scratch/ws/ws1/torgunakov-workapr/Databases/unc5b_loc_short_chr_name/unc5b_loc.wraped.chromsizes -z /beegfs/scratch/ws/ws1/torgunakov-workapr/Databases/unc5b_loc_short_chr_name/unc5b_loc.wraped.fa -D /home/torgunakov/Tools/juicer1.6_compact -t 24                                                                                                                                                                                                                                                                                                                                                  
Sequenced Read Pairs:  48,985,795
 Normal Paired: 5,538,909 (11.31%)
 Chimeric Paired: 220,279 (0.45%)
 Chimeric Ambiguous: 105,671 (0.22%)
 Unmapped: 43,120,936 (88.03%)
 Ligation Motif Present: 27,250,840 (55.63%)
Alignable (Normal+Chimeric Paired): 5,759,188 (11.76%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2025-05-12T23:28:32,559]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 898,045 (1.83%)
PCR Duplicates: 4,861,143 (9.92%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 899,536
Intra-fragment Reads: 161,280 (0.33% / 17.96%)
Below MAPQ Threshold: 446,424 (0.91% / 49.71%)
Hi-C Contacts: 451,621 (0.92% / 50.29%)
 Ligation Motif Present: 278,786  (0.57% / 31.04%)
 3' Bias (Long Range): 53% - 47%
 Pair Type intra chrom %(L-I-O-R): 10% - 69% - 11% - 10%