Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g mm10 -d /storage2/nyt/Projects/Juicer-Out/2023-01-08_BGI/Paul/OB2_unc -s DpnII -y /storage2/dreamworld/Databases/mm10_canonical/juicer.rs/mm10_canonical.rs.DpnII.txt -p /storage2/dreamworld/Databases/mm10_canonical/mm10_canonical.chrom.sizes -z /storage2/dreamworld/Databases/mm10_canonical/mm10_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
Sequenced Read Pairs:  793,656
 Normal Paired: 235,274 (29.64%)
 Chimeric Paired: 268,312 (33.81%)
 Chimeric Ambiguous: 222,110 (27.99%)
 Unmapped: 67,960 (8.56%)
 Ligation Motif Present: 623,754 (78.59%)
Alignable (Normal+Chimeric Paired): 503,586 (63.45%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-01-20T16:36:59,251]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 496,649 (62.58%)
PCR Duplicates: 6,937 (0.87%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 18,110,462
Intra-fragment Reads: 93,104 (11.73% / 18.75%)
Below MAPQ Threshold: 98,468 (12.41% / 19.83%)
Hi-C Contacts: 305,077 (38.44% / 61.43%)
 Ligation Motif Present: 251,755  (31.72% / 50.69%)
 3' Bias (Long Range): 67% - 33%
 Pair Type intra chrom %(L-I-O-R): 8% - 75% - 8% - 8%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 15%
 Cis/all (FF and RR orient): 8.5%
Inter-chromosomal: 236,823  (29.84% / 47.68%)
Intra-chromosomal: 68,254  (8.60% / 13.74%)
Short Range (<20,000bp): 46,656  (5.88% / 9.39%)
Long Range (>20,000bp): 21,598  (2.72% / 4.35%)