FastQCFastQC Report
Fri 22 Oct 2021
103_S103_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename103_S103_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127083
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG9112271.70274544982414No Hit
AACAGCTATGACCATACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA13911.0945602480268801No Hit
ACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA8990.70741169157165No Hit
AACAGCTATGACATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA8980.7066248042617818No Hit
AACAGCTATGACCATTCGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA6090.47921437170982745No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGGGG5790.4556077524137768No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACCCTAGAGG5520.4343617950473313No Hit
AACAGCTATGACCTTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA5450.42885358387825284No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCGGGTCGACTCTAGAGG5170.4068207392019389No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCCGCAGGTCGACTCTAGAGG5090.400525640722992No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCAAGAGG5060.398164978793387No Hit
AACAGCTATGACCATTACGCCAAGCTCGGCCTGCAGGTCGACTCTAGAGG4910.3863616691453617No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGCCGACTCTAGAGG4470.3517386275111541No Hit
AAAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA4240.333640219384182No Hit
AACAGTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA4220.3320664447644453No Hit
AACAGCTTGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA4160.32734512090523515No Hit
AATAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG4000.3147549239473415No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGGCTCTAGAGG3900.306886050848658No Hit
AACGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA3820.3005909523697112No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTGGAGG3780.2974434031302377No Hit
AACAGCTATGCCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA3690.2903614173414225No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCCAGAGG3610.2840663188624757No Hit
AACAGCTATGACCATTACGCCAAGCTAGGCCTGCAGGTCGACTCTAGAGG3590.282492544242739No Hit
AACAGCATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA3520.27698433307366055No Hit
AACAGCTATGACCATTACGCCAAGCCTGGCCTGCAGGTCGACTCTAGAGG3500.2754105584539238No Hit
AACAGTTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG3450.27147612190458204No Hit
AACAGCTATGACTATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG3330.2620334741861618No Hit
AACAGCTAGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA3300.25967281225655675No Hit
AACACTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA3160.24865638991839978No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGCCTCTAGAGG3160.24865638991839978No Hit
AACAGCTATGACCATTATGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2910.22898420717169096No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGACGACTCTAGAGG2850.22426288331248082No Hit
AACAGCTATGACCATTACGCCATGCTTGGCCTGCAGGTCGACTCTAGAGG2770.217967784833534No Hit
AACAGCTATGACCATTACGCTAAGCTTGGCCTGCAGGTCGACTCTAGAGG2670.21009891173485043No Hit
AACAGCTATGACCAATACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2610.20537758787564034No Hit
AACAGCTATGACCATTAGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA2600.204590700565772No Hit
AACAGCTATGACCATTACGTCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2590.2038038132559036No Hit
AACAGCTATACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA2540.19986937670656185No Hit
AACAGCAATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2520.19829560208682512No Hit
ACCAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2510.19750871477695678No Hit
AACAGCTATGATCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2440.19200050360787832No Hit
AACAGCTATGACCATTACGCCAAACTTGGCCTGCAGGTCGACTCTAGAGG2430.19121361629800995No Hit
AACAGCTAAGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG2130.16760699700195936No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACACTAGAGG2070.16288567314274924No Hit
AACAGCTATGACCATAACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1990.1565905746638024No Hit
AAACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAG1970.15501680004406568No Hit
AACAGCTATGACCATTACCCAAGCTTGGCCTGCAGGTCGACTCTAGAGGA1960.15422991273419734No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCAGCAGGTCGACTCTAGAGG1760.13849216653683027No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCTGGTCGACTCTAGAGG1660.13062329343814671No Hit
AACAGCTATGACCATTACGCAAAGCTTGGCCTGCAGGTCGACTCTAGAGG1600.1259019695789366No Hit
AACGGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1600.1259019695789366No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTACAGGTCGACTCTAGAGG1540.12118064571972648No Hit
AACAGCTATGACCACTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1530.12039375840985814No Hit
AACAGCTATGCCCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1510.11881998379012142No Hit
AACAGCTACGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1490.11724620917038472No Hit
AACAGCTATGACCATTACGCCAAGCATGGCCTGCAGGTCGACTCTAGAGG1470.115672434550648No Hit
AACAGCTATGACCATTACGCCAAGCTTGACCTGCAGGTCGACTCTAGAGG1460.11488554724077965No Hit
AACAGCTATGACCATTCCGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1440.11331177262104293No Hit
AGCAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1390.10937733607170118No Hit
AACACCTATGACCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1370.10780356145196446No Hit
AACAGCTATGGCCATTACGCCAAGCTTGGCCTGCAGGTCGACTCTAGAGG1360.1070166741420961No Hit
AACAGCTATGACCATTACGCCAAGCTTGGCCTGCAGGTTGACTCTAGAGG1290.10150846297301763No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)