Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/Ano/MSQ1 -p /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V3/AsteI2_V3.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V3/AsteI2_V3.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V3/AsteI2_V3.fa -o /mnt/storage/home/manuriddinov/scratch/Invertebrates/MSQ1 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                 
Sequenced Read Pairs:  271,787
 Normal Paired: 182,013 (66.97%)
 Chimeric Paired: 28,545 (10.50%)
 Chimeric Ambiguous: 19,658 (7.23%)
 Unmapped: 41,571 (15.30%)
 Ligation Motif Present: 2,972 (1.09%)
Alignable (Normal+Chimeric Paired): 210,558 (77.47%)
Unique Reads: 159,334 (58.62%)
PCR Duplicates: 49,125 (18.07%)
Optical Duplicates: 2,099 (0.77%)
Library Complexity Estimate: 369,667
Intra-fragment Reads: 57,686 (21.22% / 36.20%)
Below MAPQ Threshold: 7,385 (2.72% / 4.63%)
Hi-C Contacts: 94,263 (34.68% / 59.16%)
 Ligation Motif Present: 1,278  (0.47% / 0.80%)
 3' Bias (Long Range): 55% - 45%
 Pair Type %(L-I-O-R): 23% - 29% - 26% - 22%
Inter-chromosomal: 17,075  (6.28% / 10.72%)
Intra-chromosomal: 77,188  (28.40% / 48.44%)
Short Range (<20Kb): 71,923  (26.46% / 45.14%)
Long Range (>20Kb): 5,265  (1.94% / 3.30%)