Here is a repository of Anopheles genomic data.

"annotation" - V$ genome annotations. Please, note that the last genome assembly version is V4.
--> "genes" - .bed and .bedGraph tracks displaying gene coordinates and gene density;

--> "cons" - conserved elements called using PhastCons software;

--> "repeats" - genomic repeats annotated by RepeatMasker;

"chipseq" - processed chipseq data;

"domains" - TADs called by hicExplorer;
"eigs" - A/B-comparments tracks calculated using different algorithms;

"gc" - .bedGraph tracks with gc-content;

"genomes" - genome .fasta-files, scaffold order, and chromosome sizes;

"hic" - Hi-C heat maps built on V4 genomes;

"rnaseq" - processed rnaseq data.

"synblocks" - contain interspecies syntenic blocks and supported files.
--> "chains" - chain-files generated by kent-utils from full genome pairwise alignments;
--> "nets" - net-files generated from the chain-files;
--> "called_blocks" - called syntenic blocks.