Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/Ano/AalbS2 -p /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/Aalb_VARYA/AalbS2_V3.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/Aalb_VARYA/AalbS2_V3.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/Aalb_VARYA/AalbS2_V3.fa -o /mnt/storage/home/manuriddinov/scratch/Anopheles_out/AalbS2_V3 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  67,591,619
 Normal Paired: 30,787,793 (45.55%)
 Chimeric Paired: 30,295,709 (44.82%)
 Chimeric Ambiguous: 2,614,742 (3.87%)
 Unmapped: 3,893,375 (5.76%)
 Ligation Motif Present: 46,422,310 (68.68%)
Alignable (Normal+Chimeric Paired): 61,083,502 (90.37%)
Unique Reads: 56,129,336 (83.04%)
PCR Duplicates: 3,502,506 (5.18%)
Optical Duplicates: 1,451,660 (2.15%)
Library Complexity Estimate: 487,552,124
Intra-fragment Reads: 2,461,570 (3.64% / 4.39%)
Below MAPQ Threshold: 682,547 (1.01% / 1.22%)
Hi-C Contacts: 52,985,219 (78.39% / 94.40%)
 Ligation Motif Present: 23,987,831  (35.49% / 42.74%)
 3' Bias (Long Range): 50% - 50%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 6,862,999  (10.15% / 12.23%)
Intra-chromosomal: 46,122,220  (68.24% / 82.17%)
Short Range (<20Kb): 13,468,625  (19.93% / 24.00%)
Long Range (>20Kb): 32,653,284  (48.31% / 58.18%)