Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/Ano/AatrE3 -p /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/Aatr_VARYA/Aatr_V3.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/Aatr_VARYA/Aatr_V3.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/Aatr_VARYA/Aatr_V3.fa -o /mnt/storage/home/manuriddinov/scratch/Anopheles_out/Aatr_V3 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  217,895,615
 Normal Paired: 103,420,169 (47.46%)
 Chimeric Paired: 72,384,597 (33.22%)
 Chimeric Ambiguous: 15,313,087 (7.03%)
 Unmapped: 26,777,762 (12.29%)
 Ligation Motif Present: 142,902,260 (65.58%)
Alignable (Normal+Chimeric Paired): 175,804,766 (80.68%)
Unique Reads: 150,572,935 (69.10%)
PCR Duplicates: 22,928,735 (10.52%)
Optical Duplicates: 2,303,096 (1.06%)
Library Complexity Estimate: 597,237,052
Intra-fragment Reads: 8,205,249 (3.77% / 5.45%)
Below MAPQ Threshold: 5,901,863 (2.71% / 3.92%)
Hi-C Contacts: 136,465,823 (62.63% / 90.63%)
 Ligation Motif Present: 60,551,709  (27.79% / 40.21%)
 3' Bias (Long Range): 50% - 50%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 24,255,276  (11.13% / 16.11%)
Intra-chromosomal: 112,210,547  (51.50% / 74.52%)
Short Range (<20Kb): 25,525,319  (11.71% / 16.95%)
Long Range (>20Kb): 86,684,768  (39.78% / 57.57%)