Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/Ano/MSQ3 -p /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V3/AsteI2_V3.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V3/AsteI2_V3.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V3/AsteI2_V3.fa -o /mnt/storage/home/manuriddinov/scratch/Invertebrates/MSQ3 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                 
Sequenced Read Pairs:  14,208,763
 Normal Paired: 6,414,772 (45.15%)
 Chimeric Paired: 4,505,688 (31.71%)
 Chimeric Ambiguous: 1,294,722 (9.11%)
 Unmapped: 1,993,581 (14.03%)
 Ligation Motif Present: 9,520,901 (67.01%)
Alignable (Normal+Chimeric Paired): 10,920,460 (76.86%)
Unique Reads: 9,010,150 (63.41%)
PCR Duplicates: 1,784,204 (12.56%)
Optical Duplicates: 126,106 (0.89%)
Library Complexity Estimate: 28,945,601
Intra-fragment Reads: 1,480,413 (10.42% / 16.43%)
Below MAPQ Threshold: 835,961 (5.88% / 9.28%)
Hi-C Contacts: 6,693,776 (47.11% / 74.29%)
 Ligation Motif Present: 3,314,859  (23.33% / 36.79%)
 3' Bias (Long Range): 51% - 49%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 899,588  (6.33% / 9.98%)
Intra-chromosomal: 5,794,188  (40.78% / 64.31%)
Short Range (<20Kb): 2,695,502  (18.97% / 29.92%)
Long Range (>20Kb): 3,098,677  (21.81% / 34.39%)