Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -S final -d /mnt/storage/home/manuriddinov/scratch/fastq/Ano/MSQ -p /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V4/AsteI2_V4.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V4/AsteI2_V4.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V4/AsteI2_V4.fa -o /mnt/storage/home/manuriddinov/scratch/Invertebrates/MSQ -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU Unique Reads: 78,573,705 PCR Duplicates: -78,573,705 Optical Duplicates: 0 Library Complexity Estimate: 0 Intra-fragment Reads: 10,481,927(13.34%) Below MAPQ Threshold: 7,003,865(8.91%) Hi-C Contacts: 61,087,913(77.75%) Ligation Motif Present: 29,589,004 (37.66%) 3' Bias (Long Range): 50% - 50% Pair Type %(L-I-O-R): 25% - 25% - 25% - 25% Inter-chromosomal: 9,549,285 (12.15%) Intra-chromosomal: 51,538,628 (65.59%) Short Range (<20Kb): 21,381,109 (27.21%) Long Range (>20Kb): 30,157,448 (38.38%)