Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/Ano/MSQ -p /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V4/AsteI2_V4.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V4/AsteI2_V4.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Anopheles/genome/chr/AsteI2_V4/AsteI2_V4.fa -o /mnt/storage/home/manuriddinov/scratch/Invertebrates/MSQ -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  190,318,305
 Normal Paired: 54,793,816 (28.79%)
 Chimeric Paired: 34,858,385 (18.32%)
 Chimeric Ambiguous: 11,589,208 (6.09%)
 Unmapped: 89,076,896 (46.80%)
 Ligation Motif Present: 127,867,997 (67.19%)
Alignable (Normal+Chimeric Paired): 89,652,201 (47.11%)
Unique Reads: 78,734,056 (41.37%)
PCR Duplicates: 10,611,933 (5.58%)
Optical Duplicates: 306,212 (0.16%)
Library Complexity Estimate: 345,707,169
Intra-fragment Reads: 10,500,929 (5.52% / 13.34%)
Below MAPQ Threshold: 4,041,146 (2.12% / 5.13%)
Hi-C Contacts: 64,191,981 (33.73% / 81.53%)
 Ligation Motif Present: 31,096,522  (16.34% / 39.50%)
 3' Bias (Long Range): 50% - 50%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 11,203,164  (5.89% / 14.23%)
Intra-chromosomal: 52,988,817  (27.84% / 67.30%)
Short Range (<20Kb): 21,761,298  (11.43% / 27.64%)
Long Range (>20Kb): 31,227,441  (16.41% / 39.66%)