Experiment description: Juicer version 1.5.6;22 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 22 -d /mnt/storage/home/manuriddinov/scratch/fastq/NB/MMC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/chr/hg38/hg38.chr.sizes -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/chr/hg38/hg38.fa -s none -q 30 -n MMC -l 1000000,500000,250000,100000,50000,25000,10000,5000,1000 -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/NB/MMC -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                                                  
Sequenced Read Pairs:  57,099
 Normal Paired: 43,386,724 (75985.09%)
 Chimeric Paired: 10,084,377 (17661.21%)
 Chimeric Ambiguous: 0 (0.00%)
 Unmapped: 48,664,312 (85227.96%)
 Ligation Motif Present: 102,192,512 (178974.26%)
Alignable (Normal+Chimeric Paired): 53,471,101 (93646.30%)
Unique Reads: 88,630,131 (155,221.86%)
PCR Duplicates: 910,356 (1,594.35%)
Optical Duplicates: 2,510,549 (4,396.84%)
Library Complexity Estimate: 4,373,598,760
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 7,760,377 (13591.09% / 8.76%)
Hi-C Contacts: 80,869,754 (141630.77% / 91.24%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 13% - 61% - 13% - 13%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 41%
 Cis/all (FF and RR orient): 75.0%
Inter-chromosomal: 12,002,701  (21020.86% / 13.54%)
Intra-chromosomal: 68,867,053  (120609.91% / 77.70%)
Short Range (<20,000bp): 40,212,518  (70425.96% / 45.37%)
Long Range (>20,000bp): 28,654,535  (50183.95% / 32.33%)