Experiment description: Juicer version 1.5.6;4 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 4 -d /mnt/storage/home/manuriddinov/scratch/fastq/mm10/degron/dMR231-A -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/chr/mm10/mm10.chr.sizes -q 30 -s none -n dMR231-A -l 2500000,1000000,500000,250000,100000,50000,25000,10000,5000 -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/chr/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/mm10/degron/dMR231-A -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                
Unique Reads: 85,716,367 
PCR Duplicates: 430,167 
Optical Duplicates: 1,221,905 
Library Complexity Estimate: 8,597,242,203
Intra-fragment Reads: 0(0.00%)
Below MAPQ Threshold: 15,378,906(17.94%)
Hi-C Contacts: 70,337,461(82.06%)
 Ligation Motif Present: 0 (0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 14% - 57% - 14% - 14%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 35%
 Cis/all (FF and RR orient): 70.6%
Inter-chromosomal: 13,446,686 (15.69%)
Intra-chromosomal: 56,890,775 (66.37%)
Short Range (<1bp): 47 (0.00%)
Long Range (>1bp): 56,890,728 (66.37%)