Experiment description: Juicer version 1.5.6;4 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 4 -d /mnt/storage/home/manuriddinov/scratch/fastq/mm10/degron/dMR70-C -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/chr/mm10/mm10.chr.sizes -q 30 -s none -n dMR70-C -l 2500000,1000000,500000,250000,100000,50000,25000,10000,5000 -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/chr/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/mm10/degron/dMR70-C -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  110,520,211
 Normal Paired: 41,237,148 (37.31%)
 Chimeric Paired: 54,531,165 (49.34%)
 Chimeric Ambiguous: 14,358,726 (12.99%)
 Unmapped: 393,172 (0.36%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 95,768,313 (86.65%)
Unique Reads: 93,746,031 (84.82%)
PCR Duplicates: 545,563 (0.49%)
Optical Duplicates: 1,476,719 (1.34%)
Library Complexity Estimate: 8,116,914,871
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 10,571,053 (9.56% / 11.28%)
Hi-C Contacts: 83,174,978 (75.26% / 88.72%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 15% - 56% - 15% - 15%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 34%
 Cis/all (FF and RR orient): 72.2%
Inter-chromosomal: 15,328,080  (13.87% / 16.35%)
Intra-chromosomal: 67,846,898  (61.39% / 72.37%)
Short Range (<1bp): 73  (0.00% / 0.00%)
Long Range (>1bp): 67,846,825  (61.39% / 72.37%)