Experiment description: Juicer version 1.5.6;2 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 2 -d /mnt/storage/home/manuriddinov/scratch/fastq/mm10/NY/SCcomb -n SCcomb -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/mm10/NY/SCcomb -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                             
Unique Reads: 71,565,568 
PCR Duplicates: 12,235,295 
Optical Duplicates: 1,006,272 
Library Complexity Estimate: 258,308,532
Intra-fragment Reads: 1,637,465(2.29%)
Below MAPQ Threshold: 14,063,423(19.65%)
Hi-C Contacts: 55,864,680(78.06%)
 Ligation Motif Present: 34,561,887 (48.29%)
 3' Bias (Long Range): 76% - 24%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 5,311,160 (7.42%)
Intra-chromosomal: 50,553,520 (70.64%)
Short Range (<20Kb): 22,149,114 (30.95%)
Long Range (>20Kb): 28,404,355 (39.69%)