Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_hic/K562S1Hic -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
Sequenced Read Pairs:  36,997,662
 Normal Paired: 25,948,137 (70.13%)
 Chimeric Paired: 9,569,807 (25.87%)
 Chimeric Ambiguous: 1,204,608 (3.26%)
 Unmapped: 275,110 (0.74%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 35,517,944 (96.00%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-11-18T14:11:50,295]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 34,647,955 (93.65%)
PCR Duplicates: 869,989 (2.35%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 713,134,869
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 3,238,399 (8.75% / 9.35%)
Hi-C Contacts: 31,409,556 (84.90% / 90.65%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 12% - 63% - 12% - 12%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 47%
 Cis/all (FF and RR orient): 89.3%
Inter-chromosomal: 1,775,937  (4.80% / 5.13%)
Intra-chromosomal: 29,633,619  (80.10% / 85.53%)
Short Range (<20,000bp): 20,126,356  (54.40% / 58.09%)
Long Range (>20,000bp): 9,507,263  (25.70% / 27.44%)