Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_hic/K562S1Hic -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
Sequenced Read Pairs:  36,997,662
 Normal Paired: 25,948,137 (70.13%)
 Chimeric Paired: 9,569,807 (25.87%)
 Chimeric Ambiguous: 1,204,608 (3.26%)
 Unmapped: 275,110 (0.74%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 35,517,944 (96.00%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-11-18T14:11:50,295]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 34,647,955 (93.65%)
PCR Duplicates: 869,989 (2.35%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 713,134,869
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 5,221,308 (14.11% / 15.07%)
Hi-C Contacts: 29,426,647 (79.54% / 84.93%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 12% - 63% - 12% - 12%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 48%
 Cis/all (FF and RR orient): 90.5%
Inter-chromosomal: 1,454,358  (3.93% / 4.20%)
Intra-chromosomal: 27,972,289  (75.61% / 80.73%)
Short Range (<20,000bp): 19,096,276  (51.61% / 55.12%)
Long Range (>20,000bp): 8,876,013  (23.99% / 25.62%)