FitHiChIP summary Report

Parameter list for the current execution of FitHiChIP: /sf/storage/gmo/hic/out/by_Project/HiChIP/data/NR27/FitHiChIP_2//Parameters.txt

List of CIS interactions within the specified distance thresholds (lower threshold: 1000000 upper threshold: 20000000 ): /sf/storage/gmo/hic/out/by_Project/HiChIP/data/NR27/FitHiChIP_2//HiCPro_Matrix_BinSize100000/L_1000000_U20000000/cross_test2.cis.interactions.DistThr.bed

Bin specific HiChIP coverage, coverage bias, and peak / non-peak boolean values: /sf/storage/gmo/hic/out/by_Project/HiChIP/data/NR27/FitHiChIP_2//NormFeatures/Coverage_Bias/cross_test2.coverage_Bias.bed

Statistics for peak to ALL (both peak and non-peak) loops

FitHiChIP background (0 means loose, 1 means stringent ) : 0

Statistics for peak to ALL (both peak and non-peak) loops

FitHiChIP background (0 means loose, 1 means stringent ) : 1