Experiment description: Ch
Sequenced Read Pairs:  3,464,150
 Normal Paired: 3,257,832 (94.04%)
 Chimeric Paired: 23,749 (0.69%)
 Chimeric Ambiguous: 25,134 (0.73%)
 Unmapped: 157,435 (4.54%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 3,281,581 (94.73%)
Unique Reads: 3,159,252 (91.20%)
PCR Duplicates: 112,212 (3.24%)
Optical Duplicates: 10,117 (0.29%)
Library Complexity Estimate: 46,591,807
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 1,116,325 (32.23% / 35.34%)
Hi-C Contacts: 2,042,927 (58.97% / 64.66%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 15% - 56% - 14% - 15%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 35%
 Cis/all (FF and RR orient): 76.9%
Inter-chromosomal: 305,428  (8.82% / 9.67%)
Intra-chromosomal: 1,737,499  (50.16% / 55.00%)
Short Range (<20,000bp): 968,979  (27.97% / 30.67%)
Long Range (>20,000bp): 768,520  (22.18% / 24.33%)