Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 20 threads; openjdk version "1.8.0_152-release"; /home/aapopov/tool/juicer1.6_compact-main/scripts/juicer.sh -g hg38 -d /data/aapopov/Projects/HumanDros/Zapusk_Sirius_Human_Dros/718_a/ -s none -p /data/aapopov/Projects/HumanDros/CTCF_Aux_data_for_juicer/genome/Homo_sapiens.GRCh38.dna.primary_assembly.chrom.sizes -z /data/aapopov/Projects/HumanDros/CTCF_Aux_data_for_juicer/genome/Homo_sapiens.GRCh38.dna.primary_assembly.fa -D /home/aapopov/tool/juicer1.6_compact-main -t 20                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
Sequenced Read Pairs:  10,803,240
 Normal Paired: 7,017,582 (64.96%)
 Chimeric Paired: 2,619,408 (24.25%)
 Chimeric Ambiguous: 925,838 (8.57%)
 Unmapped: 240,412 (2.23%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 9,636,990 (89.20%)
WARN [2023-12-10T14:30:01,682]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 7,370,355 (68.22%)
PCR Duplicates: 2,108,152 (19.51%)
Optical Duplicates: 158,483 (1.47%)
Library Complexity Estimate: 18,015,273
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 768,499 (7.11% / 10.43%)
Hi-C Contacts: 6,601,856 (61.11% / 89.57%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 12% - 64% - 12% - 12%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 40%
 Cis/all (FF and RR orient): 63.0%
Inter-chromosomal: 1,463,224  (13.54% / 19.85%)
Intra-chromosomal: 5,138,632  (47.57% / 69.72%)
Short Range (<20,000bp): 3,371,643  (31.21% / 45.75%)
Long Range (>20,000bp): 1,766,989  (16.36% / 23.97%)