cell_type	path_to_processed_hic_data_hic	path_to_processed_hic_data_cool	enzyme	number of replicates	assembly	cite
HFF	https://data.4dnucleome.org/files-processed/4DNFIPC7P27B/@@download/4DNFIPC7P27B.hic	https://data.4dnucleome.org/files-processed/4DNFI9FVHJZQ/@@download/4DNFI9FVHJZQ.mcool	MNase	3	GRCh38	"Krietenstein N, Abraham S, Venev SV, Abdennur N, Gibcus J, Hsieh TS, Parsi KM, Yang L, Maehr R, Mirny LA, Dekker J, Rando OJ. Ultrastructural Details of Mammalian Chromosome Architecture. Mol Cell. 2020 May 7;78(3):554-565.e7. doi: 10.1016/j.molcel.2020.03.003. Epub 2020 Mar 25. PMID: 32213324; PMCID: PMC7222625."
H1	https://data.4dnucleome.org/files-processed/4DNFI2TK7L2F/@@download/4DNFI2TK7L2F.hic	https://data.4dnucleome.org/files-processed/4DNFI9GMP2J8/@@download/4DNFI9GMP2J8.mcool	MNase	2	GRCh38	"Krietenstein N, Abraham S, Venev SV, Abdennur N, Gibcus J, Hsieh TS, Parsi KM, Yang L, Maehr R, Mirny LA, Dekker J, Rando OJ. Ultrastructural Details of Mammalian Chromosome Architecture. Mol Cell. 2020 May 7;78(3):554-565.e7. doi: 10.1016/j.molcel.2020.03.003. Epub 2020 Mar 25. PMID: 32213324; PMCID: PMC7222625."
GM12878	https://data.4dnucleome.org/files-processed/4DNFI1UEG1HD/@@download/4DNFI1UEG1HD.hic	https://data.4dnucleome.org/files-processed/4DNFIXP4QG5B/@@download/4DNFIXP4QG5B.mcool	MboI	16	GRCh38	"Rao SS, Huntley MH, Durand NC, Stamenova EK, Bochkov ID, Robinson JT, Sanborn AL, Machol I, Omer AD, Lander ES, Aiden EL. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell. 2014 Dec 18;159(7):1665-80. doi: 10.1016/j.cell.2014.11.021. Epub 2014 Dec 11. Erratum in: Cell. 2015 Jul 30;162(3):687-8. PMID: 25497547; PMCID: PMC5635824."
K562	https://data.4dnucleome.org/files-processed/4DNFITUOMFUQ/@@download/4DNFITUOMFUQ.hic	https://data.4dnucleome.org/files-processed/4DNFI18UHVRO/@@download/4DNFI18UHVRO.mcool	MboI	4	GRCh38	"Rao SS, Huntley MH, Durand NC, Stamenova EK, Bochkov ID, Robinson JT, Sanborn AL, Machol I, Omer AD, Lander ES, Aiden EL. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell. 2014 Dec 18;159(7):1665-80. doi: 10.1016/j.cell.2014.11.021. Epub 2014 Dec 11. Erratum in: Cell. 2015 Jul 30;162(3):687-8. PMID: 25497547; PMCID: PMC5635824."