inter.hic Hi-C map at 5Kb resolution for vizualisation in Juicebox
inter_5kb.cool Hi-C map at 5Kb resolution for vizualization in HiGlass normalized by C-TALE normalization
inter_10kb.cool Hi-C map at 10Kb resolution for vizualization in HiGlass by C-TALE normalization
inter_20kb.cool Hi-C map at 20Kb resolution for vizualization in HiGlass by C-TALE normalization
inter_25kb.cool Hi-C map at 25Kb resolution for vizualization in HiGlass by C-TALE normalization
inter_50kb.cool Hi-C map at 50Kb resolution for vizualization in HiGlass by C-TALE normalization
inter_no_balanced_5kb.cool Hi-C map at 5Kb resolution for vizualization in HiGlass without normalization
inter_no_balanced_10kb.cool Hi-C map at 10Kb resolution for vizualization in HiGlass without normalization
inter_no_balanced_20kb.cool Hi-C map at 20Kb resolution for vizualization in HiGlass without normalization
inter_no_balanced_25kb.cool Hi-C map at 25Kb resolution for vizualization in HiGlass without normalization
inter_no_balanced_50kb.cool Hi-C map at 50Kb resolution for vizualization in HiGlass without normalization
inter.pairs.txt.gz input for cooler in format chr1|pos1|chr2|pos2
merged_nodups.txt.gz input for Juicer in standard merged_nodups format
vector.txt C-TALE normalization vector for 5Kb resolution
inter_statistics.txt the main mapping statistics generated by Juicer