Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 6 threads; java version "1.8.0_45"; ./juicer.sh -t 6 -g hg38 -D /mnt/storage/home/aselsukova/distributives/juicer -d /mnt/storage/home/aselsukova/distributives/juicer/scratch/Rearr_data/DelB_Mut -s DpnII -p /mnt/storage/home/aselsukova/genomes/chrom.sizes/chrom.sizes_hg38 -y /mnt/storage/home/aselsukova/genomes/restriction_sites/hg38_DpnII.txt -z /mnt/storage/home/aselsukova/genomes/references/hg38/hg38.fa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
Sequenced Read Pairs:  100,336,065
 Normal Paired: 99,124,849 (98.79%)
 Chimeric Paired: 4,726 (0.00%)
 Chimeric Ambiguous: 1,375 (0.00%)
 Unmapped: 1,205,115 (1.20%)
 Ligation Motif Present: 7,745 (0.01%)
Alignable (Normal+Chimeric Paired): 99,129,575 (98.80%)
java -Djava.awt.headless=true -Xmx16000m -jar /mnt/storage/home/aselsukova/distributives/juicer/scripts/common/juicer_tools.jar LibraryComplexity /mnt/storage/home/aselsukova/distributives/juicer/scratch/Rearr_data/DelB_Mut/aligned inter.txt
Intra-fragment Reads: 17,133,898 (17.08% / 56.43%)
Below MAPQ Threshold: 4,007,250 (3.99% / 13.20%)
Hi-C Contacts: 9,220,119 (9.19% / 30.37%)
 Ligation Motif Present: 2,183  (0.00% / 0.01%)
 3' Bias (Long Range): 83% - 17%
 Pair Type %(L-I-O-R): 26% - 25% - 25% - 25%
Inter-chromosomal: 2,673,946  (2.66% / 8.81%)
Intra-chromosomal: 6,546,173  (6.52% / 21.56%)
Short Range (<20Kb): 4,696,609  (4.68% / 15.47%)
Long Range (>20Kb): 1,849,517  (1.84% / 6.09%)