Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 6 threads; java version "1.8.0_45"; ./juicer.sh -t 6 -g hg38 -D /mnt/storage/home/aselsukova/distributives/juicer -d /mnt/storage/home/aselsukova/distributives/juicer/scratch/Rearr_data/DelB_WT -s DpnII -p /mnt/storage/home/aselsukova/genomes/chrom.sizes/chrom.sizes_hg38 -y /mnt/storage/home/aselsukova/genomes/restriction_sites/hg38_DpnII.txt -z /mnt/storage/home/aselsukova/genomes/references/hg38/hg38.fa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
Sequenced Read Pairs:  111,483,392
 Normal Paired: 110,094,807 (98.75%)
 Chimeric Paired: 5,009 (0.00%)
 Chimeric Ambiguous: 1,762 (0.00%)
 Unmapped: 1,381,814 (1.24%)
 Ligation Motif Present: 8,168 (0.01%)
Alignable (Normal+Chimeric Paired): 110,099,816 (98.76%)
java -Djava.awt.headless=true -Xmx16000m -jar /mnt/storage/home/aselsukova/distributives/juicer/scripts/common/juicer_tools.jar LibraryComplexity /mnt/storage/home/aselsukova/distributives/juicer/scratch/Rearr_data/DelB_WT/aligned inter.txt
Intra-fragment Reads: 19,355,071 (17.36% / 55.73%)
Below MAPQ Threshold: 4,784,085 (4.29% / 13.78%)
Hi-C Contacts: 10,590,373 (9.50% / 30.49%)
 Ligation Motif Present: 2,400  (0.00% / 0.01%)
 3' Bias (Long Range): 83% - 17%
 Pair Type %(L-I-O-R): 26% - 25% - 25% - 25%
Inter-chromosomal: 3,357,523  (3.01% / 9.67%)
Intra-chromosomal: 7,232,850  (6.49% / 20.83%)
Short Range (<20Kb): 5,119,734  (4.59% / 14.74%)
Long Range (>20Kb): 2,113,026  (1.90% / 6.08%)