Experiment description: Juicer version 1.5.6;4 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -d /mnt/storage/home/asryzhkova/scratch/fastq/capture_fibr_kit30 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU -t 4 -o /mnt/storage/home/asryzhkova/scratch/hic/Vertebrates/mm10 -n mm10 -q 30                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  58,518,376
 Normal Paired: 22,594,714 (38.61%)
 Chimeric Paired: 28,895,879 (49.38%)
 Chimeric Ambiguous: 6,593,744 (11.27%)
 Unmapped: 434,039 (0.74%)
 Ligation Motif Present: 54,915,050 (93.84%)
Alignable (Normal+Chimeric Paired): 51,490,593 (87.99%)
Unique Reads: 45,445,985 (77.66%)
PCR Duplicates: 6,044,608 (10.33%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 201,787,433
Intra-fragment Reads: 635,836 (1.09% / 1.40%)
Below MAPQ Threshold: 7,231,016 (12.36% / 15.91%)
Hi-C Contacts: 37,579,133 (64.22% / 82.69%)
 Ligation Motif Present: 30,423,568  (51.99% / 66.94%)
 3' Bias (Long Range): 86% - 14%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 13,822,168  (23.62% / 30.41%)
Intra-chromosomal: 23,756,965  (40.60% / 52.28%)
Short Range (<20Kb): 15,534,752  (26.55% / 34.18%)
Long Range (>20Kb): 8,222,207  (14.05% / 18.09%)