Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -n Fibs_dKO-1 -d /mnt/storage/home/manuriddinov/scratch/fastq/cHi-C/CapF/CapF-3 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/CapF-3 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                              
Sequenced Read Pairs:  55,960,720
 Normal Paired: 33,564,482 (59.98%)
 Chimeric Paired: 16,520,142 (29.52%)
 Chimeric Ambiguous: 5,211,026 (9.31%)
 Unmapped: 665,070 (1.19%)
 Ligation Motif Present: 46,826,145 (83.68%)
Alignable (Normal+Chimeric Paired): 50,084,624 (89.50%)
Unique Reads: 32,706,948 (58.45%)
PCR Duplicates: 3,491,167 (6.24%)
Optical Duplicates: 13,886,509 (24.81%)
Library Complexity Estimate: 175,389,158
Intra-fragment Reads: 1,755,926 (3.14% / 5.37%)
Below MAPQ Threshold: 3,354,730 (5.99% / 10.26%)
Hi-C Contacts: 27,596,292 (49.31% / 84.37%)
 Ligation Motif Present: 19,653,284  (35.12% / 60.09%)
 3' Bias (Long Range): 77% - 23%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 5,621,873  (10.05% / 17.19%)
Intra-chromosomal: 21,974,419  (39.27% / 67.19%)
Short Range (<20Kb): 14,590,985  (26.07% / 44.61%)
Long Range (>20Kb): 7,383,369  (13.19% / 22.57%)