Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -n Mela_d30 -d /mnt/storage/home/manuriddinov/scratch/fastq/cHi-C/CapM/CapM-6 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/Cap/CapM-6 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                            
Sequenced Read Pairs:  130,662,966
 Normal Paired: 52,168,334 (39.93%)
 Chimeric Paired: 58,425,778 (44.71%)
 Chimeric Ambiguous: 19,339,171 (14.80%)
 Unmapped: 729,683 (0.56%)
 Ligation Motif Present: 66,835,705 (51.15%)
Alignable (Normal+Chimeric Paired): 110,594,112 (84.64%)
Unique Reads: 92,696,814 (70.94%)
PCR Duplicates: 821,345 (0.63%)
Optical Duplicates: 17,075,953 (13.07%)
Library Complexity Estimate: 5,292,759,825
Intra-fragment Reads: 3,644,314 (2.79% / 3.93%)
Below MAPQ Threshold: 9,773,648 (7.48% / 10.54%)
Hi-C Contacts: 79,278,852 (60.67% / 85.52%)
 Ligation Motif Present: 29,285,462  (22.41% / 31.59%)
 3' Bias (Long Range): 81% - 19%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 20,200,473  (15.46% / 21.79%)
Intra-chromosomal: 59,078,379  (45.21% / 63.73%)
Short Range (<20Kb): 23,384,623  (17.90% / 25.23%)
Long Range (>20Kb): 35,693,712  (27.32% / 38.51%)