Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -S final -n Mela_d30-2 -d /mnt/storage/home/manuriddinov/scratch/fastq/cHi-C/CapM/CapM-6 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/Cap/CapM-6 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU Unique Reads: 92,696,814 PCR Duplicates: -92,696,814 Optical Duplicates: 0 Library Complexity Estimate: 0 Intra-fragment Reads: 3,644,314(3.93%) Below MAPQ Threshold: 14,155,013(15.27%) Hi-C Contacts: 74,897,487(80.80%) Ligation Motif Present: 27,916,566 (30.12%) 3' Bias (Long Range): 81% - 19% Pair Type %(L-I-O-R): 25% - 25% - 25% - 25% Inter-chromosomal: 18,647,018 (20.12%) Intra-chromosomal: 56,250,469 (60.68%) Short Range (<20Kb): 22,669,608 (24.46%) Long Range (>20Kb): 33,580,818 (36.23%)