Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -S merge -n Mela_WT -d /mnt/storage/home/manuriddinov/scratch/fastq/cHi-C/CapM/CapM-3 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/Cap/Mela_WT -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  80,801,300
 Normal Paired: 37,393,989 (46.28%)
 Chimeric Paired: 34,162,772 (42.28%)
 Chimeric Ambiguous: 8,362,835 (10.35%)
 Unmapped: 881,704 (1.09%)
 Ligation Motif Present: 33,938,114 (42.00%)
Alignable (Normal+Chimeric Paired): 71,556,761 (88.56%)
Unique Reads: 59,684,285 (73.87%)
PCR Duplicates: 1,325,184 (1.64%)
Optical Duplicates: 10,547,292 (13.05%)
Library Complexity Estimate: 1,383,980,907
Intra-fragment Reads: 4,402,760 (5.45% / 7.38%)
Below MAPQ Threshold: 5,777,190 (7.15% / 9.68%)
Hi-C Contacts: 49,504,335 (61.27% / 82.94%)
 Ligation Motif Present: 15,247,410  (18.87% / 25.55%)
 3' Bias (Long Range): 75% - 25%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 11,766,775  (14.56% / 19.72%)
Intra-chromosomal: 37,737,560  (46.70% / 63.23%)
Short Range (<20Kb): 12,382,913  (15.33% / 20.75%)
Long Range (>20Kb): 25,354,603  (31.38% / 42.48%)