585 chr1 3290 4190 CR1-C3 469 - 3290 4190 0 2 504,396, 0,504, -,-, 3 LINE CR1 585 chr1 6057 7202 GGLTR7-int 442 - 6057 7202 0 2 172,669, 0,476, -,-, 6 LTR ERV1 585 chr1 7315 9172 GGERV10_LTR 879 - 7315 9172 0 2 1637,219, 0,1638, -,-, 7 LTR ERVL 585 chr1 15452 16064 (ACCCATAGGG)n 591 + 15452 16064 0 3 214,20,238, 0,330,374, +,+,+, 16 Satellite Satellite 585 chr1 18785 20195 GGERV10_LTR 820 - 18785 20195 0 2 1193,216, 0,1194, -,-, 25 LTR ERVL 585 chr1 26511 27123 (ACCCATAGGG)n 591 + 26511 27123 0 3 214,20,238, 0,330,374, +,+,+, 34 Satellite Satellite 585 chr1 28270 28935 (CATCC)n 622 + 28270 28935 0 2 270,214, 0,451, +,+, 37 Simple_repeat Simple_repeat 585 chr1 29281 30643 (CTCTATGGGG)n 647 + 29281 30643 0 8 120,120,180,29,117,250,120,120, 0,150,290,591,635,802,1082,1242, +,+,+,+,+,+,+,+, 42 Satellite Satellite 585 chr1 32858 33261 CR1-F2 168 + 32858 33261 0 2 158,245, 0,158, +,+, 50 LINE CR1 585 chr1 59347 60022 CR1-X1 513 + 59347 60022 0 3 166,261,128, 0,286,547, +,+,+, 69 LINE CR1 585 chr1 72633 72735 CR1-X2 682 - 72633 72735 0 2 55,47, 0,55, -,-, 84 LINE CR1 585 chr1 72958 73161 CR1-E 661 - 72958 73161 0 5 39,49,44,44,27, 0,39,88,132,176, -,-,-,-,-, 87 LINE CR1 585 chr1 89768 91303 CR1-H2 99 - 89768 91303 0 3 17,14,294, 0,1030,1241, -,-,-, 104 LINE CR1 585 chr1 125927 127145 CR1-E 697 + 125927 127145 0 4 796,48,59,55, 0,950,1075,1163, +,+,+,+, 133 LINE CR1 585 chr1 128780 129207 CR1-E 689 - 128780 129207 0 3 123,119,182, 0,126,245, -,-,-, 142 LINE CR1 586 chr1 132935 133033 CR1-E 764 + 132935 133033 0 2 49,49, 0,49, +,+, 148 LINE CR1 586 chr1 147500 147861 CR1-C4 493 + 147500 147861 0 2 99,55, 0,306, +,+, 168 LINE CR1 586 chr1 173768 174770 CR1-Y2_Aves 171 + 173768 174770 0 2 386,426, 0,576, +,+, 191 LINE CR1 586 chr1 197009 200078 CR1-L3B_Croc 91 - 197009 200078 0 4 507,352,356,644, 0,1135,1616,2425, -,-,-,-, 213 LINE CR1 586 chr1 205089 207088 CR1-F2 399 + 205089 207088 0 2 258,148, 0,1851, +,+, 218 LINE CR1 586 chr1 211648 211938 CR1-C4 518 + 211648 211938 0 2 140,96, 0,194, +,+, 225 LINE CR1 586 chr1 216005 216274 CR1-Y2_Aves 285 - 216005 216274 0 2 72,98, 0,171, -,-, 229 LINE CR1 586 chr1 221480 221649 CR1-Y1_Aves 558 - 221480 221649 0 2 88,71, 0,98, -,-, 233 LINE CR1 586 chr1 248746 249276 CR1-D2 567 - 248746 249276 0 2 272,258, 0,272, -,-, 263 LINE CR1 587 chr1 265846 266450 CR1-Y1_Aves 406 + 265846 266450 0 2 88,511, 0,93, +,+, 286 LINE CR1 587 chr1 284103 284227 CR1-E 683 - 284103 284227 0 3 57,38,29, 0,57,95, -,-,-, 308 LINE CR1 587 chr1 309046 309133 CR1-C3 771 - 309046 309133 0 2 50,37, 0,50, -,-, 334 LINE CR1 587 chr1 309122 309210 CR1-E 733 - 309122 309210 0 2 50,38, 0,50, -,-, 335 LINE CR1 587 chr1 331167 331643 CR1-Y4 361 - 331167 331643 0 2 236,214, 0,262, -,-, 357 LINE CR1 587 chr1 335458 335915 GGLTR8B 412 + 335458 335915 0 2 56,216, 0,241, +,+, 359 LTR ERVL 587 chr1 338097 338227 CR1-C4 693 + 338097 338227 0 3 47,43,40, 0,47,90, +,+,+, 366 LINE CR1 587 chr1 356907 359113 CR1-Y2 514 - 356907 359113 0 2 265,310, 0,1896, -,-, 384 LINE CR1 587 chr1 362367 362638 CR1-B2 510 + 362367 362638 0 2 185,54, 0,217, +,+, 387 LINE CR1 587 chr1 366075 366635 (CATCC)n 687 + 366075 366635 0 2 225,324, 0,236, +,+, 397 Simple_repeat Simple_repeat 587 chr1 370237 370760 CR1-X1 446 + 370237 370760 0 2 98,425, 0,98, +,+, 403 LINE CR1 587 chr1 374680 375097 CR1-B2 571 + 374680 375097 0 3 203,54,46, 0,317,371, +,+,+, 408 LINE CR1 587 chr1 375083 375180 CR1-B 641 + 375083 375180 0 2 54,43, 0,54, +,+, 411 LINE CR1 587 chr1 375255 375352 CR1-B 641 + 375255 375352 0 2 54,43, 0,54, +,+, 414 LINE CR1 587 chr1 387938 391586 CR1-Y4 345 + 387938 391586 0 2 304,185, 0,3463, +,+, 429 LINE CR1 587 chr1 388839 390180 CR1-F2 479 - 388839 390180 0 2 415,139, 0,1202, -,-, 430 LINE CR1 588 chr1 404330 405013 (CTGTG)n 416 + 404330 405013 0 2 398,228, 0,455, +,+, 451 Simple_repeat Simple_repeat 588 chr1 414190 414660 (CATAG)n 496 + 414190 414660 0 3 77,18,20, 0,255,450, +,+,+, 465 Simple_repeat Simple_repeat 588 chr1 416670 416779 (CCAAC)n 887 + 416670 416779 0 2 46,31, 0,78, +,+, 471 Simple_repeat Simple_repeat 588 chr1 420052 420611 CR1-C 841 - 420052 420611 0 2 457,48, 0,511, -,-, 481 LINE CR1 588 chr1 434489 434949 CR1-Y4 390 - 434489 434949 0 2 157,196, 0,264, -,-, 496 LINE CR1 588 chr1 435554 436543 CR1-F 479 - 435554 436543 0 2 56,105, 0,884, -,-, 498 LINE CR1 588 chr1 436578 436649 (C)n 945 + 436578 436649 0 2 19,19, 0,52, +,+, 501 Simple_repeat Simple_repeat 588 chr1 439949 442228 (CATG)n 368 + 439949 442228 0 5 173,163,780,903,177, 0,184,365,1156,2102, +,+,+,+,+, 510 Simple_repeat Simple_repeat 588 chr1 450545 450954 (ACCCCATAGGG)n 385 + 450545 450954 0 3 113,127,113, 0,140,296, +,+,+, 521 Satellite Satellite 588 chr1 451992 452404 CR1-F2 432 - 451992 452404 0 2 77,71, 0,341, -,-, 529 LINE CR1 588 chr1 453924 454090 CR1-F2 501 - 453924 454090 0 2 71,85, 0,81, -,-, 549 LINE CR1 588 chr1 454089 454646 CR1-F2 511 - 454089 454646 0 3 54,69,71, 0,388,486, -,-,-, 550 LINE CR1 588 chr1 456113 456200 CR1-E 664 - 456113 456200 0 2 41,46, 0,41, -,-, 567 LINE CR1 588 chr1 457095 457720 CR1-E 706 - 457095 457720 0 12 50,50,38,49,39,28,48,39,49,39,49,39, 0,77,127,192,241,280,308,356,422,471,537,586, -,-,-,-,-,-,-,-,-,-,-,-, 573 LINE CR1 588 chr1 457785 458027 CR1-E 689 - 457785 458027 0 4 50,49,39,50, 0,77,126,192, -,-,-,-, 574 LINE CR1 588 chr1 458172 458289 CR1-E 676 - 458172 458289 0 3 49,30,38, 0,49,79, -,-,-, 577 LINE CR1 588 chr1 468875 473740 CR1-C2 517 + 468875 473740 0 2 135,130, 0,4735, +,+, 584 LINE CR1 588 chr1 480917 481133 CR1-H 508 - 480917 481133 0 2 52,53, 0,163, -,-, 590 LINE CR1 588 chr1 516695 519969 CR1-X2 231 - 516695 519969 0 3 11,24,1245, 0,190,2029, -,-,-, 623 LINE CR1 588 chr1 521337 521562 CR1-Y3 709 - 521337 521562 0 2 46,179, 0,46, -,-, 629 LINE CR1 588 chr1 522649 522785 CR1-C3 544 - 522649 522785 0 3 56,43,37, 0,56,99, -,-,-, 632 LINE CR1 588 chr1 523036 523135 CR1-C3 596 - 523036 523135 0 2 57,42, 0,57, -,-, 636 LINE CR1 589 chr1 554615 554749 CR1-C4 598 - 554615 554749 0 2 54,50, 0,84, -,-, 657 LINE CR1 589 chr1 554744 554845 CR1-C3 653 - 554744 554845 0 2 44,57, 0,44, -,-, 659 LINE CR1 589 chr1 554877 555017 CR1-C4 591 - 554877 555017 0 3 54,43,43, 0,54,97, -,-,-, 660 LINE CR1 589 chr1 566721 567122 (ACCCATTGGG)n 356 - 566721 567122 0 2 221,118, 0,283, -,-, 673 Satellite Satellite 589 chr1 567352 567691 (ACCCATTGGG)n 394 - 567352 567691 0 2 109,198, 0,141, -,-, 674 Satellite Satellite 589 chr1 578169 579594 CR1-B2 562 - 578169 579594 0 2 53,50, 0,1375, -,-, 688 LINE CR1 589 chr1 586296 587699 CR1-D2 509 - 586296 587699 0 2 56,106, 0,1297, -,-, 716 LINE CR1 589 chr1 604759 605125 CR1-D2 570 + 604759 605125 0 2 288,54, 0,312, +,+, 735 LINE CR1 589 chr1 607763 607842 CR1-E 762 + 607763 607842 0 2 38,41, 0,38, +,+, 745 LINE CR1 589 chr1 608166 608364 CR1-E 673 + 608166 608364 0 3 47,50,50, 0,73,148, +,+,+, 749 LINE CR1 589 chr1 608368 608440 CR1-E 776 + 608368 608440 0 2 34,38, 0,34, +,+, 750 LINE CR1 589 chr1 612462 613115 CR1-F2 84 - 612462 613115 0 2 271,48, 0,605, -,-, 756 LINE CR1 589 chr1 613441 613679 CR1-C4 507 + 613441 613679 0 2 124,47, 0,191, +,+, 758 LINE CR1 589 chr1 623180 625129 CR1-C4 609 + 623180 625129 0 3 79,52,38, 0,1859,1911, +,+,+, 776 LINE CR1 590 chr1 698483 698570 CR1-C4 676 - 698483 698570 0 2 48,39, 0,48, -,-, 859 LINE CR1 590 chr1 710422 711195 CR1-Y4 614 + 710422 711195 0 3 157,103,82, 0,588,691, +,+,+, 869 LINE CR1 590 chr1 716756 718816 CR1-B2 662 + 716756 718816 0 2 50,54, 0,2006, +,+, 883 LINE CR1 590 chr1 738513 738604 CR1-C4 710 - 738513 738604 0 2 48,43, 0,48, -,-, 922 LINE CR1 590 chr1 740475 740685 CR1-C4 676 - 740475 740685 0 3 43,58,37, 0,115,173, -,-,-, 924 LINE CR1 591 chr1 796708 796816 CR1-C4 746 + 796708 796816 0 2 43,65, 0,43, +,+, 969 LINE CR1 591 chr1 807581 807671 CR1-C4 668 + 807581 807671 0 2 48,42, 0,48, +,+, 976 LINE CR1 591 chr1 841941 842329 (TGGA)n 351 + 841941 842329 0 2 185,171, 0,217, +,+, 1011 Simple_repeat Simple_repeat 591 chr1 859087 859267 CR1-C4 638 + 859087 859267 0 3 48,55,44, 0,81,136, +,+,+, 1031 LINE CR1 591 chr1 863632 865393 CR1-F2 403 + 863632 865393 0 2 93,175, 0,1586, +,+, 1032 LINE CR1 591 chr1 897721 897835 G-rich 629 + 897721 897835 0 2 40,27, 0,87, +,+, 1066 Low_complexity Low_complexity 592 chr1 966742 966953 CR1-F2 538 - 966742 966953 0 2 119,92, 0,119, -,-, 1107 LINE CR1 592 chr1 981197 981430 CR1-H2 588 - 981197 981430 0 2 65,58, 0,175, -,-, 1113 LINE CR1 592 chr1 981456 981598 CR1-C4 616 - 981456 981598 0 2 58,58, 0,84, -,-, 1118 LINE CR1 592 chr1 1006463 1006863 (CATTC)n 633 + 1006463 1006863 0 2 190,192, 0,208, +,+, 1131 Satellite Satellite 592 chr1 1016402 1016606 CR1-F2 504 - 1016402 1016606 0 2 107,97, 0,107, -,-, 1143 LINE CR1 592 chr1 1024221 1025648 CR1-F 928 + 1024221 1025648 0 2 526,901, 0,526, +,+, 1150 LINE CR1 592 chr1 1030182 1030867 CR1-Y2 533 - 1030182 1030867 0 4 11,111,118,429, 0,20,138,256, -,-,-,-, 1157 LINE CR1 592 chr1 1045229 1046558 CR1-X2 672 + 1045229 1046558 0 4 57,62,60,51, 0,836,1117,1278, +,+,+,+, 1167 LINE CR1 593 chr1 1089601 1091423 CR1-D 713 + 1089601 1091423 0 3 726,805,289, 0,728,1533, +,+,+, 1188 LINE CR1 593 chr1 1118047 1120561 CR1-D2 528 + 1118047 1120561 0 3 339,125,179, 0,352,2335, +,+,+, 1204 LINE CR1 593 chr1 1118431 1118680 CR1-D2 518 + 1118431 1118680 0 2 96,117, 0,132, +,+, 1205 LINE CR1 594 chr1 1186791 1187162 CR1-Y2_Aves 183 + 1186791 1187162 0 2 55,201, 0,170, +,+, 1256 LINE CR1 594 chr1 1235292 1235750 CR1-X2 628 + 1235292 1235750 0 2 207,198, 0,260, +,+, 1295 LINE CR1 594 chr1 1265175 1265560 (GAAAA)n 912 + 1265175 1265560 0 2 179,183, 0,202, +,+, 1321 Simple_repeat Simple_repeat 594 chr1 1298848 1299734 CR1-F2 373 - 1298848 1299734 0 2 125,169, 0,717, -,-, 1352 LINE CR1 595 chr1 1333139 1333282 CR1-X2 547 - 1333139 1333282 0 2 70,71, 0,72, -,-, 1379 LINE CR1 595 chr1 1340777 1340947 A-rich 650 + 1340777 1340947 0 2 28,81, 0,89, +,+, 1390 Low_complexity Low_complexity 595 chr1 1428413 1430023 CR1-F2 420 - 1428413 1430023 0 2 201,342, 0,1268, -,-, 1454 LINE CR1 595 chr1 1439390 1440104 CR1-F2 542 - 1439390 1440104 0 2 377,337, 0,377, -,-, 1465 LINE CR1 596 chr1 1474738 1475350 CR1-F2 477 + 1474738 1475350 0 2 102,224, 0,388, +,+, 1493 LINE CR1 596 chr1 1493888 1494918 Char12Mar1_GG 492 - 1493888 1494918 0 2 945,74, 0,956, -,-, 1516 DNA hAT-Charlie 596 chr1 1496422 1497000 CR1-F2 513 + 1496422 1497000 0 2 439,134, 0,444, +,+, 1519 LINE CR1 596 chr1 1539016 1539427 CR1-F2 467 - 1539016 1539427 0 2 93,318, 0,93, -,-, 1549 LINE CR1 597 chr1 1597669 1598692 CR1-F2 313 - 1597669 1598692 0 2 510,510, 0,513, -,-, 1605 LINE CR1 598 chr1 1704527 1704764 CR1-F2 629 - 1704527 1704764 0 2 142,95, 0,142, -,-, 1705 LINE CR1 598 chr1 1727515 1727632 CR1-X1 687 - 1727515 1727632 0 2 90,27, 0,90, -,-, 1726 LINE CR1 598 chr1 1737343 1737878 CR1-F2 332 + 1737343 1737878 0 2 113,172, 0,363, +,+, 1732 LINE CR1 598 chr1 1741497 1742885 CR1-L3A_Croc 103 + 1741497 1742885 0 2 272,400, 0,988, +,+, 1740 LINE CR1 598 chr1 1759606 1760455 CR1-C3 588 + 1759606 1760455 0 2 146,150, 0,699, +,+, 1752 LINE CR1 598 chr1 1789279 1791964 CR1-C4 578 - 1789279 1791964 0 2 1016,1669, 0,1016, -,-, 1775 LINE CR1 599 chr1 1852961 1854573 CR1-C2 685 + 1852961 1854573 0 3 416,776,420, 0,416,1192, +,+,+, 1816 LINE CR1 599 chr1 1860019 1861631 CR1-C2 682 + 1860019 1861631 0 3 416,776,420, 0,416,1192, +,+,+, 1822 LINE CR1 599 chr1 1867084 1868696 CR1-C2 681 + 1867084 1868696 0 3 416,776,420, 0,416,1192, +,+,+, 1829 LINE CR1 599 chr1 1874116 1875713 CR1-C2 677 + 1874116 1875713 0 3 411,769,417, 0,411,1180, +,+,+, 1835 LINE CR1 599 chr1 1901117 1902716 CR1-C2 661 + 1901117 1902716 0 3 409,774,416, 0,409,1183, +,+,+, 1855 LINE CR1 599 chr1 1912260 1913855 CR1-C2 654 + 1912260 1913855 0 3 417,756,415, 0,424,1180, +,+,+, 1865 LINE CR1 599 chr1 1919266 1920868 CR1-C2 664 + 1919266 1920868 0 3 409,774,419, 0,409,1183, +,+,+, 1871 LINE CR1 599 chr1 1927378 1928676 CR1-C2 647 - 1927378 1928676 0 3 303,639,55, 0,587,1243, -,-,-, 1879 LINE CR1 599 chr1 1933869 1935468 CR1-C2 663 - 1933869 1935468 0 3 426,783,390, 0,426,1209, -,-,-, 1884 LINE CR1 599 chr1 1940881 1942482 CR1-C2 662 - 1940881 1942482 0 3 426,784,391, 0,426,1210, -,-,-, 1890 LINE CR1 599 chr1 1951049 1952073 CR1-C2 494 - 1951049 1952073 0 3 36,639,55, 0,313,969, -,-,-, 1898 LINE CR1 599 chr1 1957258 1958860 CR1-C2 665 - 1957258 1958860 0 3 426,784,392, 0,426,1210, -,-,-, 1903 LINE CR1 599 chr1 1964106 1964767 CR1-C 765 - 1964106 1964767 0 2 274,385, 0,276, -,-, 1908 LINE CR1 599 chr1 1964883 1965513 GGLTR7B 391 + 1964883 1965513 0 2 131,329, 0,301, +,+, 1909 LTR ERV1 600 chr1 1975704 1977488 CR1-L3A_Croc 331 + 1975704 1977488 0 2 508,59, 0,1725, +,+, 1917 LINE CR1 600 chr1 2073716 2074817 CR1-Y2_Aves 291 + 2073716 2074817 0 2 189,242, 0,859, +,+, 2020 LINE CR1 600 chr1 2091945 2092493 CR1-C4 604 + 2091945 2092493 0 2 428,120, 0,428, +,+, 2038 LINE CR1 601 chr1 2143183 2144526 CR1-F2 592 - 2143183 2144526 0 2 1030,301, 0,1042, -,-, 2083 LINE CR1 601 chr1 2146881 2147916 CR1-Y1_Aves 505 + 2146881 2147916 0 3 703,86,82, 0,704,953, +,+,+, 2088 LINE CR1 602 chr1 2290278 2290339 (A)n 816 + 2290278 2290339 0 2 7,7, 0,54, +,+, 2230 Simple_repeat Simple_repeat 602 chr1 2332795 2334553 CR1-H2 424 + 2332795 2334553 0 2 35,102, 0,1656, +,+, 2278 LINE CR1 603 chr1 2362230 2363053 Char12Mar1_GG 402 + 2362230 2363053 0 2 730,67, 0,756, +,+, 2305 DNA hAT-Charlie 603 chr1 2370816 2373444 CR1-F2 516 + 2370816 2373444 0 2 579,135, 0,2493, +,+, 2313 LINE CR1 603 chr1 2392935 2395740 CR1-F2 451 - 2392935 2395740 0 2 259,139, 0,2666, -,-, 2340 LINE CR1 603 chr1 2414753 2417138 CR1-F2 528 + 2414753 2417138 0 2 83,73, 0,2312, +,+, 2362 LINE CR1 603 chr1 2418330 2418418 CR1-C4 850 - 2418330 2418418 0 2 43,35, 0,53, -,-, 2365 LINE CR1 604 chr1 2528735 2530619 CR1-C3 503 - 2528735 2530619 0 2 154,227, 0,1657, -,-, 2462 LINE CR1 604 chr1 2546513 2547978 CR1-F2 359 - 2546513 2547978 0 2 133,151, 0,1314, -,-, 2477 LINE CR1 604 chr1 2578590 2579114 CR1-L3B_Croc 380 + 2578590 2579114 0 2 155,81, 0,443, +,+, 2512 LINE CR1 604 chr1 2619776 2620058 CR1-X1 559 - 2619776 2620058 0 2 133,149, 0,133, -,-, 2542 LINE CR1 605 chr1 2726310 2727303 CR1-D2 568 - 2726310 2727303 0 2 265,724, 0,269, -,-, 2617 LINE CR1 605 chr1 2732481 2733511 GGLTR8B 469 - 2732481 2733511 0 3 514,133,232, 0,665,798, -,-,-, 2622 LTR ERVL 606 chr1 2787626 2790235 CR1-D 761 - 2787626 2790235 0 2 1108,1501, 0,1108, -,-, 2686 LINE CR1 606 chr1 2821621 2823943 CR1-F2 431 - 2821621 2823943 0 2 1763,559, 0,1763, -,-, 2719 LINE CR1 606 chr1 2848447 2848607 CR1-C4 403 - 2848447 2848607 0 2 89,71, 0,89, -,-, 2754 LINE CR1 606 chr1 2864331 2865547 Char12Mar1_GG 530 - 2864331 2865547 0 2 356,824, 0,392, -,-, 2774 DNA hAT-Charlie 607 chr1 2903231 2903781 CR1-C4 570 - 2903231 2903781 0 2 201,348, 0,202, -,-, 2815 LINE CR1 607 chr1 2915020 2915544 CR1-C4 609 + 2915020 2915544 0 2 75,448, 0,76, +,+, 2823 LINE CR1 607 chr1 2925865 2926077 CR1-B2 375 - 2925865 2926077 0 2 27,124, 0,88, -,-, 2836 LINE CR1 607 chr1 3003034 3004001 CR1-D 784 - 3003034 3004001 0 2 329,638, 0,329, -,-, 2912 LINE CR1 608 chr1 3053987 3054534 CR1-D2 665 - 3053987 3054534 0 2 195,352, 0,195, -,-, 2956 LINE CR1 608 chr1 3118295 3118359 (CAT)n 342 + 3118295 3118359 0 2 12,18, 0,46, +,+, 3007 Simple_repeat Simple_repeat 609 chr1 3147622 3148114 REP131 214 - 3147622 3148114 0 2 157,156, 0,336, -,-, 3023 DNA? DNA? 609 chr1 3157057 3159288 CR1-E 318 - 3157057 3159288 0 2 464,783, 0,1448, -,-, 3026 LINE CR1 609 chr1 3219637 3219909 Char12Mar1_GG 580 - 3219637 3219909 0 2 181,44, 0,228, -,-, 3048 DNA hAT-Charlie 609 chr1 3223113 3223345 CR1-D2 618 + 3223113 3223345 0 2 52,180, 0,52, +,+, 3052 LINE CR1 609 chr1 3233678 3234047 GGLTR3A 752 - 3233678 3234047 0 2 59,299, 0,70, -,-, 3057 LTR ERVL 610 chr1 3290319 3290989 CR1-X1 667 + 3290319 3290989 0 2 191,124, 0,546, +,+, 3111 LINE CR1 610 chr1 3338828 3339544 CR1-Y4 513 - 3338828 3339544 0 2 363,343, 0,373, -,-, 3145 LINE CR1 611 chr1 3438132 3439786 CR1-Y4 520 - 3438132 3439786 0 3 582,916,155, 0,582,1499, -,-,-, 3188 LINE CR1 611 chr1 3467797 3467865 (ATTTT)n 284 + 3467797 3467865 0 2 34,10, 0,58, +,+, 3215 Simple_repeat Simple_repeat 611 chr1 3491475 3491917 CR1-D2 864 - 3491475 3491917 0 2 35,63, 0,379, -,-, 3239 LINE CR1 611 chr1 3533274 3534083 CR1-Y1_Aves 422 - 3533274 3534083 0 2 591,216, 0,593, -,-, 3264 LINE CR1 612 chr1 3546122 3547227 CR1-C4 725 + 3546122 3547227 0 2 131,181, 0,924, +,+, 3270 LINE CR1 612 chr1 3548667 3549771 CR1-H2 380 - 3548667 3549771 0 2 65,160, 0,944, -,-, 3274 LINE CR1 612 chr1 3618032 3618129 GA-rich 462 + 3618032 3618129 0 2 23,30, 0,67, +,+, 3336 Low_complexity Low_complexity 612 chr1 3653873 3654030 (CCCTT)n 732 + 3653873 3654030 0 2 72,57, 0,100, +,+, 3373 Simple_repeat Simple_repeat 612 chr1 3658571 3659734 CR1-E 468 - 3658571 3659734 0 2 436,612, 0,551, -,-, 3377 LINE CR1 613 chr1 3709761 3710727 CR1-X1 544 + 3709761 3710727 0 2 292,570, 0,396, +,+, 3412 LINE CR1 613 chr1 3732288 3733344 CR1-C2 793 + 3732288 3733344 0 2 609,447, 0,609, +,+, 3438 LINE CR1 613 chr1 3781299 3781586 Char12Mar1_GG 801 - 3781299 3781586 0 2 120,167, 0,120, -,-, 3474 DNA hAT-Charlie 614 chr1 3848727 3848910 CR1-G 393 + 3848727 3848910 0 2 29,88, 0,95, +,+, 3528 LINE CR1 614 chr1 3870307 3873635 CR1-Y 402 - 3870307 3873635 0 2 219,384, 0,2944, -,-, 3554 LINE CR1 614 chr1 3879741 3880649 CR1-Y4 369 - 3879741 3880649 0 2 89,818, 0,90, -,-, 3566 LINE CR1 614 chr1 3905600 3908746 CR1-D2 592 - 3905600 3908746 0 2 130,75, 0,3071, -,-, 3588 LINE CR1 615 chr1 3977287 3979625 CR1-F2 464 + 3977287 3979625 0 2 145,215, 0,2123, +,+, 3636 LINE CR1 76 chr1 4060031 4064567 CR1-C4 250 - 4060031 4064567 0 2 121,121, 0,4415, -,-, 3701 LINE CR1 616 chr1 4108883 4113248 CR1-C4 641 + 4108883 4113248 0 2 208,119, 0,4246, +,+, 3740 LINE CR1 616 chr1 4115563 4115656 CR1-D2 750 . 4115563 4115656 0 2 48,45, 0,48, +,-, 3749 LINE CR1 616 chr1 4177823 4178639 CR1-C 735 + 4177823 4178639 0 2 85,728, 0,88, +,+, 3781 LINE CR1 618 chr1 4420396 4420467 (TCATT)n 288 + 4420396 4420467 0 2 13,6, 0,65, +,+, 3961 Simple_repeat Simple_repeat 619 chr1 4488865 4491894 CR1-C4 582 - 4488865 4491894 0 2 102,41, 0,2988, -,-, 4015 LINE CR1 621 chr1 4730386 4730450 A-rich 334 + 4730386 4730450 0 2 13,28, 0,36, +,+, 4233 Low_complexity Low_complexity 621 chr1 4789437 4791339 CR1-C4 594 + 4789437 4791339 0 2 674,268, 0,1634, +,+, 4273 LINE CR1 621 chr1 4792506 4793190 CR1-X2 514 + 4792506 4793190 0 2 348,336, 0,348, +,+, 4280 LINE CR1 621 chr1 4823501 4825207 CR1-D2 549 + 4823501 4825207 0 2 872,818, 0,888, +,+, 4304 LINE CR1 621 chr1 4843526 4843570 (TTTC)n 492 + 4843526 4843570 0 2 12,13, 0,31, +,+, 4323 Simple_repeat Simple_repeat 622 chr1 4868202 4868650 CR1-C2 680 - 4868202 4868650 0 2 211,237, 0,211, -,-, 4354 LINE CR1 622 chr1 4958697 4958928 CR1-C3 636 + 4958697 4958928 0 2 11,34, 0,197, +,+, 4443 LINE CR1 622 chr1 4960342 4960831 CR1-Y1_Aves 414 + 4960342 4960831 0 2 131,130, 0,359, +,+, 4446 LINE CR1 623 chr1 4993014 4993403 CR1-Y 466 + 4993014 4993403 0 2 310,49, 0,340, +,+, 4481 LINE CR1 623 chr1 5012903 5012992 (T)n 826 + 5012903 5012992 0 2 34,23, 0,66, +,+, 4494 Simple_repeat Simple_repeat 623 chr1 5037690 5037769 (AAGAAT)n 374 + 5037690 5037769 0 2 15,24, 0,55, +,+, 4523 Simple_repeat Simple_repeat 623 chr1 5046891 5047834 CR1-L3B_Croc 347 - 5046891 5047834 0 3 70,387,149, 0,305,794, -,-,-, 4535 LINE CR1 623 chr1 5052506 5052552 (TTTTTC)n 528 + 5052506 5052552 0 2 9,16, 0,30, +,+, 4543 Simple_repeat Simple_repeat 623 chr1 5076061 5076291 CR1-F2 566 - 5076061 5076291 0 2 75,155, 0,75, -,-, 4570 LINE CR1 623 chr1 5091515 5091745 CR1-F2 566 - 5091515 5091745 0 2 75,155, 0,75, -,-, 4582 LINE CR1 623 chr1 5101531 5106850 CR1-Y3 670 + 5101531 5106850 0 2 612,184, 0,5135, +,+, 4589 LINE CR1 624 chr1 5112799 5112906 (A)n 950 + 5112799 5112906 0 2 55,18, 0,89, +,+, 4600 Simple_repeat Simple_repeat 624 chr1 5127240 5130051 Charlie12_GGa 432 - 5127240 5130051 0 2 83,403, 0,2408, -,-, 4613 DNA hAT-Charlie 624 chr1 5127320 5129651 CR1-E 710 + 5127320 5129651 0 3 275,1009,403, 0,618,1928, +,+,+, 4614 LINE CR1 624 chr1 5165490 5165789 GGERV10_LTR 620 - 5165490 5165789 0 2 97,52, 0,247, -,-, 4646 LTR ERVL 624 chr1 5184219 5185321 CR1-E 239 - 5184219 5185321 0 2 745,357, 0,745, -,-, 4665 LINE CR1 624 chr1 5213081 5214599 CR1-D 656 + 5213081 5214599 0 2 279,1238, 0,280, +,+, 4684 LINE CR1 625 chr1 5302935 5304082 CR1-F2 598 - 5302935 5304082 0 2 544,353, 0,794, -,-, 4767 LINE CR1 625 chr1 5311470 5312207 CR1-L3B_Croc 175 + 5311470 5312207 0 2 158,142, 0,595, +,+, 4781 LINE CR1 625 chr1 5353112 5354372 CR1-D 469 + 5353112 5354372 0 2 127,989, 0,271, +,+, 4816 LINE CR1 625 chr1 5357765 5358448 CR1-G 873 + 5357765 5358448 0 2 561,122, 0,561, +,+, 4823 LINE CR1 626 chr1 5495728 5497074 CR1-D2 404 - 5495728 5497074 0 2 996,350, 0,996, -,-, 4945 LINE CR1 627 chr1 5596092 5597410 CR1-D2 645 - 5596092 5597410 0 2 226,1092, 0,226, -,-, 5033 LINE CR1 630 chr1 5932952 5933088 hAT6-N1_Croc 272 - 5932952 5933088 0 2 86,23, 0,113, -,-, 5243 DNA hAT-hAT6 631 chr1 6093033 6093215 CR1-X1 450 + 6093033 6093215 0 2 125,54, 0,128, +,+, 5336 LINE CR1 633 chr1 6323680 6324153 CR1-C4 640 - 6323680 6324153 0 2 158,315, 0,158, -,-, 5444 LINE CR1 633 chr1 6352061 6353556 CR1-C4 517 + 6352061 6353556 0 2 143,300, 0,1195, +,+, 5460 LINE CR1 633 chr1 6384072 6387323 CR1-3_Croc 490 + 6384072 6387323 0 2 86,48, 0,3203, +,+, 5482 LINE CR1 633 chr1 6406463 6406713 CR1-F2 558 - 6406463 6406713 0 2 155,95, 0,155, -,-, 5516 LINE CR1 634 chr1 6427680 6428521 CR1-F2 527 + 6427680 6428521 0 3 453,285,92, 0,453,749, +,+,+, 5532 LINE CR1 635 chr1 6562079 6562568 CR1-X1 586 + 6562079 6562568 0 2 291,198, 0,291, +,+, 5645 LINE CR1 635 chr1 6565323 6567244 CR1-E 728 + 6565323 6567244 0 2 736,1184, 0,737, +,+, 5647 LINE CR1 635 chr1 6570278 6571711 CR1-D2 646 - 6570278 6571711 0 2 355,67, 0,1366, -,-, 5650 LINE CR1 635 chr1 6676601 6677590 CR1-Y1_Aves 500 + 6676601 6677590 0 2 321,668, 0,321, +,+, 5719 LINE CR1 636 chr1 6691041 6691581 CR1-C4 524 + 6691041 6691581 0 2 105,431, 0,109, +,+, 5731 LINE CR1 636 chr1 6749155 6750535 CR1-Y2_Aves 65 + 6749155 6750535 0 2 464,493, 0,887, +,+, 5758 LINE CR1 636 chr1 6749491 6749897 CR1-Y2_Aves 342 + 6749491 6749897 0 2 311,60, 0,346, +,+, 5759 LINE CR1 637 chr1 6818329 6818409 A-rich 206 + 6818329 6818409 0 2 40,16, 0,64, +,+, 5811 Low_complexity Low_complexity 637 chr1 6838715 6838815 (CCGCCGG)n 386 + 6838715 6838815 0 2 7,41, 0,59, +,+, 5827 Simple_repeat Simple_repeat 638 chr1 7004138 7007364 CR1-F2 474 - 7004138 7007364 0 2 236,98, 0,3128, -,-, 5906 LINE CR1 639 chr1 7101581 7101791 CR1-X1 573 - 7101581 7101791 0 2 121,89, 0,121, -,-, 5974 LINE CR1 639 chr1 7197024 7197907 CR1-Y2_Aves 311 - 7197024 7197907 0 2 608,166, 0,717, -,-, 6047 LINE CR1 640 chr1 7258060 7258856 CR1-X1 653 - 7258060 7258856 0 2 506,290, 0,506, -,-, 6098 LINE CR1 641 chr1 7376201 7377406 CR1-D 805 + 7376201 7377406 0 2 543,662, 0,543, +,+, 6158 LINE CR1 642 chr1 7542066 7543039 CR1-H 860 + 7542066 7543039 0 2 47,926, 0,47, +,+, 6267 LINE CR1 643 chr1 7612855 7614015 CR1-L3B_Croc 115 - 7612855 7614015 0 2 603,390, 0,770, -,-, 6317 LINE CR1 643 chr1 7636420 7638618 CR1-L3B_Croc 130 - 7636420 7638618 0 2 322,1086, 0,1112, -,-, 6330 LINE CR1 643 chr1 7636818 7637459 CR1-L3A_Croc 105 - 7636818 7637459 0 2 150,347, 0,294, -,-, 6331 LINE CR1 643 chr1 7660385 7660977 CR1-C3 698 - 7660385 7660977 0 2 123,469, 0,123, -,-, 6344 LINE CR1 643 chr1 7662219 7663285 CR1-Y2_Aves 332 + 7662219 7663285 0 2 171,390, 0,676, +,+, 6345 LINE CR1 643 chr1 7680535 7680605 (GTTT)n 562 + 7680535 7680605 0 2 16,13, 0,57, +,+, 6360 Simple_repeat Simple_repeat 644 chr1 7815787 7816292 CR1-L3B_Croc 543 + 7815787 7816292 0 2 107,63, 0,442, +,+, 6451 LINE CR1 644 chr1 7854602 7854652 (TTTAACT)n 488 + 7854602 7854652 0 2 7,15, 0,35, +,+, 6482 Simple_repeat Simple_repeat 644 chr1 7857181 7857575 CR1-Y2_Aves 516 - 7857181 7857575 0 3 148,40,204, 0,149,190, -,-,-, 6486 LINE CR1 80 chr1 7863529 7864423 CR1-F 870 + 7863529 7864423 0 2 396,498, 0,396, +,+, 6490 LINE CR1 645 chr1 7979622 7979940 GGLTR5A 539 - 7979622 7979940 0 2 144,69, 0,249, -,-, 6574 LTR ERVL 646 chr1 8000000 8001361 CR1-X 541 - 8000000 8001361 0 2 435,543, 0,818, -,-, 6589 LINE CR1 646 chr1 8026268 8026747 CR1-Y1_Aves 424 + 8026268 8026747 0 2 139,337, 0,142, +,+, 6604 LINE CR1 646 chr1 8058622 8058982 CR1-D2 508 - 8058622 8058982 0 2 121,97, 0,263, -,-, 6631 LINE CR1 647 chr1 8139660 8140036 GGERVL18-LTR 761 - 8139660 8140036 0 2 139,211, 0,165, -,-, 6706 LTR ERVL 647 chr1 8150617 8150707 (T)n 804 + 8150617 8150707 0 2 35,25, 0,65, +,+, 6717 Simple_repeat Simple_repeat 80 chr1 8257131 8258062 GGLTR8B 341 - 8257131 8258062 0 2 186,565, 0,366, -,-, 6813 LTR ERVL 648 chr1 8260666 8262117 CR1-B2 833 - 8260666 8262117 0 2 517,804, 0,647, -,-, 6818 LINE CR1 648 chr1 8321400 8321476 (ATAA)n 320 + 8321400 8321476 0 2 14,31, 0,45, +,+, 6864 Simple_repeat Simple_repeat 649 chr1 8415322 8416755 CR1-F2 497 + 8415322 8416755 0 2 452,977, 0,456, +,+, 6934 LINE CR1 649 chr1 8486427 8486714 CR1-Y1_Aves 488 - 8486427 8486714 0 2 87,196, 0,91, -,-, 7003 LINE CR1 650 chr1 8539157 8539313 U1 224 + 8539157 8539313 0 2 108,13, 0,143, +,+, 7054 snRNA snRNA 650 chr1 8544440 8546109 CR1-L3A_Croc 117 - 8544440 8546109 0 3 490,570,110, 0,934,1559, -,-,-, 7059 LINE CR1 650 chr1 8547753 8548183 CR1-C4 481 + 8547753 8548183 0 2 169,200, 0,230, +,+, 7062 LINE CR1 650 chr1 8641971 8642686 ENS1B-LTR 628 + 8641971 8642686 0 2 132,456, 0,259, +,+, 7157 LTR ERVL 651 chr1 8687405 8688553 CR1-F2 573 - 8687405 8688553 0 2 217,931, 0,217, -,-, 7203 LINE CR1 651 chr1 8703788 8705524 CR1-Y2_Aves 311 + 8703788 8705524 0 3 442,677,598, 0,445,1138, +,+,+, 7218 LINE CR1 651 chr1 8739850 8740259 CR1-Y1_Aves 363 + 8739850 8740259 0 2 141,268, 0,141, +,+, 7251 LINE CR1 652 chr1 8797305 8797542 Chompy-6_Croc 362 - 8797305 8797542 0 2 105,132, 0,105, -,-, 7308 DNA PIF-Harbinger 652 chr1 8804582 8804685 (T)n 880 + 8804582 8804685 0 2 27,25, 0,78, +,+, 7315 Simple_repeat Simple_repeat 652 chr1 8861653 8862785 Mariner1_GG 595 - 8861653 8862785 0 2 957,169, 0,963, -,-, 7370 DNA TcMar-Mariner 652 chr1 8876107 8876829 CR1-E 366 - 8876107 8876829 0 2 360,361, 0,361, -,-, 7388 LINE CR1 652 chr1 8886455 8886558 (TCTC)n 490 + 8886455 8886558 0 2 11,53, 0,50, +,+, 7394 Simple_repeat Simple_repeat 653 chr1 9003135 9003898 CR1-D 639 + 9003135 9003898 0 2 362,401, 0,362, +,+, 7499 LINE CR1 654 chr1 9057095 9058855 CR1-C4 496 - 9057095 9058855 0 2 239,538, 0,1222, -,-, 7542 LINE CR1 654 chr1 9071370 9073860 CR1-C4 573 + 9071370 9073860 0 3 287,273,1884, 0,333,606, +,+,+, 7548 LINE CR1 655 chr1 9185691 9186342 Mariner1b_GG 571 - 9185691 9186342 0 2 220,252, 0,399, -,-, 7618 DNA TcMar-Mariner 655 chr1 9243791 9244804 CR1-Y3 575 + 9243791 9244804 0 2 283,730, 0,283, +,+, 7663 LINE CR1 655 chr1 9262653 9263528 CR1-F2 585 + 9262653 9263528 0 2 195,680, 0,195, +,+, 7674 LINE CR1 655 chr1 9283585 9284071 CR1-F 452 - 9283585 9284071 0 2 233,253, 0,233, -,-, 7693 LINE CR1 655 chr1 9303383 9304033 CR1-D2 711 - 9303383 9304033 0 2 62,588, 0,62, -,-, 7703 LINE CR1 656 chr1 9316330 9317891 GGERVL-A-int 207 + 9316330 9317891 0 3 236,279,232, 0,781,1329, +,+,+, 7712 LTR ERVL 656 chr1 9344382 9344914 GGERV30_LTR 610 - 9344382 9344914 0 2 270,262, 0,270, -,-, 7731 LTR ERVL 656 chr1 9362321 9363734 Char12Mar1_GG 599 - 9362321 9363734 0 2 113,463, 0,950, -,-, 7747 DNA hAT-Charlie 656 chr1 9421553 9423035 CR1-H 830 + 9421553 9423035 0 2 1111,371, 0,1111, +,+, 7797 LINE CR1 657 chr1 9444860 9446334 CR1-H 822 + 9444860 9446334 0 2 1102,372, 0,1102, +,+, 7819 LINE CR1 657 chr1 9479619 9480808 CR1-C4 498 - 9479619 9480808 0 2 629,418, 0,771, -,-, 7849 LINE CR1 657 chr1 9530943 9531085 CR1-B2 730 + 9530943 9531085 0 2 106,36, 0,106, +,+, 7883 LINE CR1 657 chr1 9531850 9532290 CR1-E 437 + 9531850 9532290 0 2 188,238, 0,202, +,+, 7884 LINE CR1 657 chr1 9543896 9543995 (T)n 684 + 9543896 9543995 0 2 35,28, 0,71, +,+, 7893 Simple_repeat Simple_repeat 658 chr1 9589083 9591589 CR1-L3A_Croc 206 - 9589083 9591589 0 2 369,60, 0,2446, -,-, 7933 LINE CR1 658 chr1 9606103 9606280 CR1-D 580 - 9606103 9606280 0 2 67,110, 0,67, -,-, 7948 LINE CR1 658 chr1 9678104 9680998 CR1-Y4 528 - 9678104 9680998 0 2 222,128, 0,2766, -,-, 8012 LINE CR1 659 chr1 9706962 9711502 CR1-11_Crp 201 - 9706962 9711502 0 2 194,692, 0,3848, -,-, 8040 LINE CR1 659 chr1 9707170 9710824 CR1-H2 859 + 9707170 9710824 0 2 1881,1240, 0,2414, +,+, 8041 LINE CR1 659 chr1 9762669 9764126 GGLTR8B 407 - 9762669 9764126 0 2 198,708, 0,749, -,-, 8087 LTR ERVL 659 chr1 9771233 9772361 CR1-Y2_Aves 183 - 9771233 9772361 0 2 672,345, 0,783, -,-, 8094 LINE CR1 659 chr1 9782832 9783370 GGLTR5A 334 - 9782832 9783370 0 2 320,181, 0,357, -,-, 8104 LTR ERVL 660 chr1 9898421 9898726 CR1-E 496 - 9898421 9898726 0 2 116,189, 0,116, -,-, 8191 LINE CR1 661 chr1 9988869 9991100 CR1-X2 482 - 9988869 9991100 0 2 69,261, 0,1970, -,-, 8267 LINE CR1 661 chr1 10051079 10052067 CR1-Y4 542 - 10051079 10052067 0 2 119,679, 0,309, -,-, 8317 LINE CR1 661 chr1 10065569 10066018 CR1-Y2_Aves 246 + 10065569 10066018 0 2 144,267, 0,182, +,+, 8334 LINE CR1 662 chr1 10117442 10118181 CR1-X1 362 + 10117442 10118181 0 2 526,128, 0,611, +,+, 8373 LINE CR1 662 chr1 10139013 10139327 CR1-C4 656 - 10139013 10139327 0 2 231,44, 0,270, -,-, 8393 LINE CR1 662 chr1 10146273 10146758 Char12Mar1_GG 604 - 10146273 10146758 0 2 63,382, 0,103, -,-, 8397 DNA hAT-Charlie 662 chr1 10181596 10182917 CR1-D2 556 + 10181596 10182917 0 2 133,1187, 0,134, +,+, 8425 LINE CR1 662 chr1 10185107 10185332 CR1-X2 472 - 10185107 10185332 0 2 146,73, 0,152, -,-, 8426 LINE CR1 662 chr1 10190230 10190552 Char12Mar1_GG 726 - 10190230 10190552 0 2 174,145, 0,177, -,-, 8434 DNA hAT-Charlie 664 chr1 10380935 10381111 Mariner1b_GG 696 - 10380935 10381111 0 2 94,82, 0,94, -,-, 8623 DNA TcMar-Mariner 665 chr1 10490629 10491713 Char12Mar1_GG 601 - 10490629 10491713 0 2 65,283, 0,801, -,-, 8723 DNA hAT-Charlie 665 chr1 10498010 10499132 CR1-F2 555 + 10498010 10499132 0 2 760,239, 0,883, +,+, 8732 LINE CR1 665 chr1 10505303 10506476 CR1-F2 501 - 10505303 10506476 0 2 305,125, 0,1048, -,-, 8737 LINE CR1 665 chr1 10528949 10529044 (T)n 741 + 10528949 10529044 0 2 24,36, 0,59, +,+, 8760 Simple_repeat Simple_repeat 665 chr1 10597768 10599918 CR1-C 728 + 10597768 10599918 0 2 1925,224, 0,1926, +,+, 8819 LINE CR1 665 chr1 10609601 10610196 CR1-F2 447 - 10609601 10610196 0 3 298,106,190, 0,298,405, -,-,-, 8829 LINE CR1 666 chr1 10629380 10639378 Char12Mar1_GG 613 - 10629380 10639378 0 2 39,109, 0,9889, -,-, 8848 DNA hAT-Charlie 666 chr1 10633362 10634808 CR1-Y2_Aves 385 + 10633362 10634808 0 2 452,172, 0,1274, +,+, 8852 LINE CR1 666 chr1 10650242 10650385 G-rich 520 + 10650242 10650385 0 2 53,48, 0,95, +,+, 8879 Low_complexity Low_complexity 666 chr1 10737991 10738949 TguLTR5d 259 - 10737991 10738949 0 2 478,103, 0,855, -,-, 8951 LTR ERVL 667 chr1 10748050 10748739 CR1-E 421 + 10748050 10748739 0 3 119,297,214, 0,178,475, +,+,+, 8963 LINE CR1 667 chr1 10792519 10793401 CR1-L3B_Croc 280 + 10792519 10793401 0 2 177,171, 0,711, +,+, 9004 LINE CR1 667 chr1 10818814 10820014 CR1-C3 646 + 10818814 10820014 0 2 203,997, 0,203, +,+, 9025 LINE CR1 667 chr1 10865469 10866012 CR1-H2 225 + 10865469 10866012 0 2 341,180, 0,363, +,+, 9060 LINE CR1 668 chr1 10888928 10889523 CR1-Y2_Aves 320 - 10888928 10889523 0 2 298,210, 0,385, -,-, 9078 LINE CR1 669 chr1 11017454 11018841 CR1-C4 487 + 11017454 11018841 0 2 752,224, 0,1163, +,+, 9204 LINE CR1 669 chr1 11059908 11060468 CR1-X2 739 + 11059908 11060468 0 2 374,49, 0,511, +,+, 9239 LINE CR1 669 chr1 11115130 11116759 CR1-C4 639 - 11115130 11116759 0 3 65,485,1079, 0,65,550, -,-,-, 9282 LINE CR1 669 chr1 11120059 11120102 (TTTT)n 508 + 11120059 11120102 0 2 11,6, 0,37, +,+, 9285 Simple_repeat Simple_repeat 669 chr1 11139084 11139644 CR1-Y2_Aves 230 + 11139084 11139644 0 2 72,472, 0,88, +,+, 9296 LINE CR1 670 chr1 11226933 11227931 CR1-E 454 - 11226933 11227931 0 2 102,450, 0,548, -,-, 9351 LINE CR1 671 chr1 11352734 11354682 CR1-B 755 + 11352734 11354682 0 2 159,1570, 0,378, +,+, 9432 LINE CR1 671 chr1 11386265 11387003 CR1-Y3 529 - 11386265 11387003 0 2 503,235, 0,503, -,-, 9447 LINE CR1 672 chr1 11418134 11418836 CR1-E 690 - 11418134 11418836 0 2 313,376, 0,326, -,-, 9467 LINE CR1 672 chr1 11429327 11430538 CR1-Y2_Aves 142 - 11429327 11430538 0 3 157,345,508, 0,200,703, -,-,-, 9471 LINE CR1 672 chr1 11442247 11443458 CR1-Y2_Aves 133 - 11442247 11443458 0 3 157,345,483, 0,200,728, -,-,-, 9476 LINE CR1 672 chr1 11460903 11461917 CR1-F2 548 - 11460903 11461917 0 2 138,100, 0,914, -,-, 9488 LINE CR1 672 chr1 11489901 11490350 (GGAA)n 822 + 11489901 11490350 0 2 283,107, 0,342, +,+, 9507 Simple_repeat Simple_repeat 672 chr1 11523955 11524169 CR1-H2 395 - 11523955 11524169 0 2 21,168, 0,46, -,-, 9532 LINE CR1 673 chr1 11540402 11541180 CR1-L3A_Croc 71 - 11540402 11541180 0 2 321,457, 0,321, -,-, 9542 LINE CR1 675 chr1 11797534 11798114 CR1-H 807 - 11797534 11798114 0 2 317,263, 0,317, -,-, 9716 LINE CR1 675 chr1 11805500 11805935 CR1-C4 618 - 11805500 11805935 0 2 379,56, 0,379, -,-, 9723 LINE CR1 675 chr1 11844204 11846115 Mariner1_GG 673 - 11844204 11846115 0 4 65,805,25,93, 0,988,1793,1818, -,-,-,-, 9746 DNA TcMar-Mariner 676 chr1 11931515 11931957 CR1-Y1_Aves 515 - 11931515 11931957 0 2 112,329, 0,113, -,-, 9813 LINE CR1 676 chr1 11976779 11977413 GGLTR5B 358 + 11976779 11977413 0 2 95,451, 0,183, +,+, 9851 LTR ERVL 676 chr1 11995766 11996576 Char12Mar1_GG 692 - 11995766 11996576 0 2 159,381, 0,429, -,-, 9866 DNA hAT-Charlie 677 chr1 12068576 12069785 CR1-F2 286 - 12068576 12069785 0 2 176,1033, 0,176, -,-, 9923 LINE CR1 677 chr1 12075360 12075424 (TTTGTT)n 504 + 12075360 12075424 0 2 23,18, 0,46, +,+, 9933 Simple_repeat Simple_repeat 678 chr1 12246113 12247248 CR1-D2 593 + 12246113 12247248 0 2 882,242, 0,893, +,+, 10057 LINE CR1 678 chr1 12256162 12259034 CR1-G 870 + 12256162 12259034 0 2 114,2758, 0,114, +,+, 10065 LINE CR1 678 chr1 12269031 12269541 CR1-11_Crp 328 - 12269031 12269541 0 2 79,334, 0,176, -,-, 10076 LINE CR1 678 chr1 12278697 12279008 CR1-Y1_Aves 432 + 12278697 12279008 0 2 178,110, 0,201, +,+, 10079 LINE CR1 678 chr1 12316728 12316936 GGLTR5B 469 - 12316728 12316936 0 2 127,81, 0,127, -,-, 10109 LTR ERVL 679 chr1 12373305 12373368 (CAG)n 952 + 12373305 12373368 0 2 30,21, 0,42, +,+, 10143 Simple_repeat Simple_repeat 679 chr1 12382168 12383171 CR1-C4 625 - 12382168 12383171 0 2 71,932, 0,71, -,-, 10151 LINE CR1 680 chr1 12522910 12524969 CR1-Y2 184 - 12522910 12524969 0 2 1046,730, 0,1329, -,-, 10224 LINE CR1 681 chr1 12598607 12599159 GGLTR5B 516 + 12598607 12599159 0 2 284,187, 0,365, +,+, 10263 LTR ERVL 682 chr1 12809961 12810688 GGLTR5B 435 + 12809961 12810688 0 2 389,168, 0,559, +,+, 10368 LTR ERVL 684 chr1 13027911 13029208 CR1-Y2_Aves 340 + 13027911 13029208 0 3 195,676,224, 0,397,1073, +,+,+, 10481 LINE CR1 686 chr1 13260595 13261179 CR1-11_Crp 213 + 13260595 13261179 0 2 367,180, 0,404, +,+, 10583 LINE CR1 686 chr1 13266004 13266745 GGLTR12C 523 + 13266004 13266745 0 2 104,254, 0,487, +,+, 10587 LTR ERVL 686 chr1 13319620 13319707 (CTCTGC)n 290 + 13319620 13319707 0 2 16,31, 0,56, +,+, 10619 Simple_repeat Simple_repeat 687 chr1 13388041 13388482 CR1-Y2_Aves 211 - 13388041 13388482 0 2 192,183, 0,258, -,-, 10651 LINE CR1 687 chr1 13402188 13402633 CR1-Y1_Aves 459 - 13402188 13402633 0 2 76,307, 0,138, -,-, 10657 LINE CR1 687 chr1 13462596 13463799 CR1-L3B_Croc 209 + 13462596 13463799 0 3 150,130,250, 0,206,953, +,+,+, 10690 LINE CR1 688 chr1 13511978 13512960 MER134 285 - 13511978 13512960 0 2 144,139, 0,843, -,-, 10716 DNA? DNA? 689 chr1 13663198 13663933 CR1-L3B_Croc 105 - 13663198 13663933 0 2 453,228, 0,507, -,-, 10790 LINE CR1 690 chr1 13849009 13849739 CR1-Y2_Aves 193 - 13849009 13849739 0 3 29,44,474, 0,108,256, -,-,-, 10883 LINE CR1 690 chr1 13861661 13861817 (TA)n 733 + 13861661 13861817 0 2 21,76, 0,80, +,+, 10886 Simple_repeat Simple_repeat 691 chr1 13895311 13895858 CR1-Y2_Aves 370 - 13895311 13895858 0 2 367,180, 0,367, -,-, 10906 LINE CR1 691 chr1 13924698 13925456 CR1-X1 555 + 13924698 13925456 0 2 379,377, 0,381, +,+, 10923 LINE CR1 691 chr1 13931564 13932428 Char12Mar1_GG 471 - 13931564 13932428 0 3 303,60,78, 0,624,786, -,-,-, 10931 DNA hAT-Charlie 691 chr1 14002451 14003250 CR1-F2 632 + 14002451 14003250 0 2 180,208, 0,591, +,+, 10969 LINE CR1 691 chr1 14005352 14006826 CR1-Y1_Aves 402 + 14005352 14006826 0 2 610,313, 0,1161, +,+, 10973 LINE CR1 692 chr1 14044462 14046223 CR1-L3B_Croc 187 + 14044462 14046223 0 3 381,139,198, 0,1267,1563, +,+,+, 10997 LINE CR1 692 chr1 14135079 14136052 CR1-E 521 - 14135079 14136052 0 2 794,150, 0,823, -,-, 11050 LINE CR1 693 chr1 14155910 14156027 CR1-C4 399 + 14155910 14156027 0 2 60,57, 0,60, +,+, 11063 LINE CR1 693 chr1 14184625 14186500 CR1-F2 569 - 14184625 14186500 0 2 314,188, 0,1687, -,-, 11075 LINE CR1 693 chr1 14229136 14230796 CR1-X2 717 - 14229136 14230796 0 2 73,84, 0,1576, -,-, 11102 LINE CR1 693 chr1 14265182 14265790 CR1-Y2_Aves 112 - 14265182 14265790 0 2 220,127, 0,481, -,-, 11121 LINE CR1 693 chr1 14278835 14282743 CR1-Y2_Aves 412 - 14278835 14282743 0 2 22,621, 0,3287, -,-, 11129 LINE CR1 694 chr1 14380821 14380878 G-rich 316 + 14380821 14380878 0 2 15,23, 0,34, +,+, 11187 Low_complexity Low_complexity 695 chr1 14433413 14434109 CR1-C4 653 + 14433413 14434109 0 2 132,564, 0,132, +,+, 11226 LINE CR1 696 chr1 14610393 14611498 CR1-E 715 + 14610393 14611498 0 2 939,166, 0,939, +,+, 11323 LINE CR1 697 chr1 14702120 14703217 CR1-Y1_Aves 481 + 14702120 14703217 0 3 70,142,127, 0,828,970, +,+,+, 11377 LINE CR1 697 chr1 14702171 14702949 CR1-C4 687 + 14702171 14702949 0 2 718,60, 0,718, +,+, 11378 LINE CR1 697 chr1 14776289 14778548 CR1-Y2_Aves 155 + 14776289 14778548 0 3 913,453,386, 0,1252,1873, +,+,+, 11414 LINE CR1 698 chr1 14814860 14815697 REP131 182 - 14814860 14815697 0 2 383,156, 0,681, -,-, 11434 DNA? DNA? 698 chr1 14847843 14848105 CR1-F0 576 - 14847843 14848105 0 2 83,179, 0,83, -,-, 11453 LINE CR1 698 chr1 14861355 14861841 CR1-Y2_Aves 256 - 14861355 14861841 0 2 244,242, 0,244, -,-, 11457 LINE CR1 698 chr1 14918200 14918600 CR1-Y4 626 + 14918200 14918600 0 2 250,150, 0,250, +,+, 11476 LINE CR1 699 chr1 15004546 15007508 CR1-C4 623 - 15004546 15007508 0 2 576,333, 0,2629, -,-, 11513 LINE CR1 699 chr1 15065708 15066030 TguLTR5e 480 + 15065708 15066030 0 2 107,124, 0,198, +,+, 11530 LTR ERVL 700 chr1 15092645 15093167 CR1-Y2_Aves 424 - 15092645 15093167 0 2 258,264, 0,258, -,-, 11546 LINE CR1 700 chr1 15180146 15181006 CR1-F 948 - 15180146 15181006 0 2 359,333, 0,527, -,-, 11597 LINE CR1 701 chr1 15213857 15214422 CR1-F2 643 - 15213857 15214422 0 2 281,284, 0,281, -,-, 11617 LINE CR1 703 chr1 15517384 15517779 GGLTR5A 593 - 15517384 15517779 0 2 257,138, 0,257, -,-, 11747 LTR ERVL 703 chr1 15517927 15518848 GGLTR5A 515 - 15517927 15518848 0 2 246,192, 0,729, -,-, 11748 LTR ERVL 703 chr1 15558117 15558379 CR1-Y2_Aves 390 - 15558117 15558379 0 2 75,176, 0,86, -,-, 11772 LINE CR1 703 chr1 15582126 15582563 CR1-D2 780 - 15582126 15582563 0 2 184,38, 0,399, -,-, 11791 LINE CR1 705 chr1 15851265 15855989 CR1-C4 638 - 15851265 15855989 0 2 87,664, 0,4060, -,-, 11924 LINE CR1 706 chr1 15890180 15893774 CR1-F2 408 - 15890180 15893774 0 2 104,390, 0,3204, -,-, 11943 LINE CR1 706 chr1 15901375 15902305 CR1-D2 661 - 15901375 15902305 0 2 139,791, 0,139, -,-, 11951 LINE CR1 706 chr1 15961035 15962950 CR1-F 514 + 15961035 15962950 0 3 140,117,1658, 0,140,257, +,+,+, 11985 LINE CR1 707 chr1 15992445 15997008 CR1-D2 731 + 15992445 15997008 0 2 79,146, 0,4417, +,+, 12003 LINE CR1 707 chr1 16106059 16110248 GGLTR10A 956 + 16106059 16110248 0 3 274,3598,313, 0,276,3876, +,+,+, 12060 LTR ERVK 710 chr1 16390738 16390801 (T)n 958 + 16390738 16390801 0 2 18,25, 0,38, +,+, 12228 Simple_repeat Simple_repeat 710 chr1 16391518 16393743 CR1-Y2 184 - 16391518 16393743 0 2 321,197, 0,2028, -,-, 12229 LINE CR1 710 chr1 16437150 16437242 (T)n 847 + 16437150 16437242 0 2 30,26, 0,66, +,+, 12264 Simple_repeat Simple_repeat 710 chr1 16448256 16449539 CR1-C3 566 - 16448256 16449539 0 2 447,836, 0,447, -,-, 12272 LINE CR1 710 chr1 16481149 16482845 CR1-Y2_Aves 310 + 16481149 16482845 0 3 350,118,242, 0,1135,1454, +,+,+, 12287 LINE CR1 711 chr1 16516529 16517261 CR1-C4 592 + 16516529 16517261 0 2 419,229, 0,503, +,+, 12318 LINE CR1 711 chr1 16520168 16520774 REP131 338 - 16520168 16520774 0 2 97,213, 0,393, -,-, 12322 DNA? DNA? 711 chr1 16536957 16537579 CR1-C4 460 - 16536957 16537579 0 2 513,109, 0,513, -,-, 12336 LINE CR1 711 chr1 16618548 16620437 CR1-G 689 - 16618548 16620437 0 3 583,67,217, 0,1446,1672, -,-,-, 12398 LINE CR1 711 chr1 16623643 16623953 CR1-X1 646 - 16623643 16623953 0 2 256,54, 0,256, -,-, 12404 LINE CR1 711 chr1 16629604 16630152 GGLTR8B 308 - 16629604 16630152 0 2 469,79, 0,469, -,-, 12410 LTR ERVL 88 chr1 16645321 16646873 CR1-C3 705 + 16645321 16646873 0 2 514,1031, 0,521, +,+, 12426 LINE CR1 712 chr1 16667490 16669421 CR1-Y2_Aves 282 - 16667490 16669421 0 3 1305,133,435, 0,1333,1496, -,-,-, 12449 LINE CR1 712 chr1 16703712 16704249 CR1-F2 510 - 16703712 16704249 0 2 386,151, 0,386, -,-, 12484 LINE CR1 712 chr1 16714138 16715605 CR1-C4 619 - 16714138 16715605 0 2 417,825, 0,642, -,-, 12496 LINE CR1 712 chr1 16737447 16737820 CR1-E 338 - 16737447 16737820 0 2 44,106, 0,267, -,-, 12517 LINE CR1 712 chr1 16744093 16744828 CR1-Y2_Aves 130 - 16744093 16744828 0 2 169,345, 0,390, -,-, 12526 LINE CR1 712 chr1 16750963 16751544 CR1-F2 407 + 16750963 16751544 0 2 346,235, 0,346, +,+, 12535 LINE CR1 713 chr1 16788326 16789539 GGLTR8B 508 - 16788326 16789539 0 2 135,815, 0,398, -,-, 12555 LTR ERVL 713 chr1 16788454 16788726 CR1-F2 709 + 16788454 16788726 0 2 206,54, 0,218, +,+, 12556 LINE CR1 713 chr1 16803018 16807364 GGLTR5A 294 - 16803018 16807364 0 2 106,358, 0,3988, -,-, 12564 LTR ERVL 713 chr1 16806508 16807000 GGLTR8A 543 - 16806508 16807000 0 2 50,429, 0,63, -,-, 12568 LTR ERVL 713 chr1 16819766 16820348 Mariner1b_GG 584 + 16819766 16820348 0 2 191,350, 0,232, +,+, 12579 DNA TcMar-Mariner 713 chr1 16822479 16824859 CR1-C3 564 - 16822479 16824859 0 3 931,611,823, 0,931,1557, -,-,-, 12583 LINE CR1 713 chr1 16849993 16850403 Char12Mar1_GG 724 - 16849993 16850403 0 2 92,318, 0,92, -,-, 12605 DNA hAT-Charlie 713 chr1 16852275 16853401 CR1-C3 625 + 16852275 16853401 0 3 333,300,492, 0,333,634, +,+,+, 12611 LINE CR1 713 chr1 16870197 16873299 CR1-Y2_Aves 153 - 16870197 16873299 0 3 1507,594,91, 0,1630,3011, -,-,-, 12621 LINE CR1 713 chr1 16878948 16879133 GA-rich 226 + 16878948 16879133 0 2 146,14, 0,171, +,+, 12629 Low_complexity Low_complexity 714 chr1 16913533 16917794 CR1-F 753 + 16913533 16917794 0 2 2306,1955, 0,2306, +,+, 12655 LINE CR1 715 chr1 17040303 17043085 GGLTR5A 310 + 17040303 17043085 0 3 140,156,265, 0,2355,2517, +,+,+, 12750 LTR ERVL 715 chr1 17042260 17042690 CR1-X2 523 - 17042260 17042690 0 2 120,310, 0,120, -,-, 12753 LINE CR1 715 chr1 17052378 17053094 REP131 155 - 17052378 17053094 0 2 456,104, 0,612, -,-, 12764 DNA? DNA? 715 chr1 17069264 17073775 Char12Mar1_GG 612 - 17069264 17073775 0 2 538,53, 0,4458, -,-, 12789 DNA hAT-Charlie 715 chr1 17124608 17139456 Char12Mar1_GG 633 - 17124608 17139456 0 2 44,302, 0,14546, -,-, 12832 DNA hAT-Charlie 715 chr1 17138112 17138645 CR1-Y3 696 - 17138112 17138645 0 2 246,287, 0,246, -,-, 12846 LINE CR1 716 chr1 17228263 17230146 CR1-F2 500 - 17228263 17230146 0 2 503,54, 0,1829, -,-, 12932 LINE CR1 716 chr1 17257233 17257862 CR1-C4 781 - 17257233 17257862 0 2 33,86, 0,543, -,-, 12956 LINE CR1 717 chr1 17313137 17315155 CR1-E 731 - 17313137 17315155 0 2 710,1308, 0,710, -,-, 13017 LINE CR1 717 chr1 17344704 17345106 CR1-E 409 - 17344704 17345106 0 2 173,214, 0,188, -,-, 13052 LINE CR1 717 chr1 17359955 17361680 Charlie12_GG 625 - 17359955 17361680 0 3 697,226,712, 0,748,1013, -,-,-, 13066 DNA hAT-Charlie 717 chr1 17369891 17370574 CR1-F2 216 + 17369891 17370574 0 2 543,140, 0,543, +,+, 13075 LINE CR1 717 chr1 17424294 17426987 CR1-C4 439 + 17424294 17426987 0 2 884,1809, 0,884, +,+, 13118 LINE CR1 718 chr1 17468414 17468692 CR1-F2 512 + 17468414 17468692 0 2 63,74, 0,204, +,+, 13158 LINE CR1 718 chr1 17514087 17515003 GGLTR5B 391 + 17514087 17515003 0 2 256,328, 0,588, +,+, 13197 LTR ERVL 718 chr1 17530887 17531540 CR1-E 441 - 17530887 17531540 0 2 312,341, 0,312, -,-, 13213 LINE CR1 718 chr1 17561198 17562535 GGERVL-A-int 167 - 17561198 17562535 0 3 236,285,240, 0,513,1097, -,-,-, 13237 LTR ERVL 719 chr1 17572014 17572076 (CTTCC)n 746 + 17572014 17572076 0 2 13,30, 0,32, +,+, 13247 Simple_repeat Simple_repeat 719 chr1 17589771 17590769 CR1-L3A_Croc 205 - 17589771 17590769 0 3 27,116,444, 0,109,554, -,-,-, 13261 LINE CR1 719 chr1 17603282 17604269 GGLTR8B 225 + 17603282 17604269 0 2 173,152, 0,835, +,+, 13278 LTR ERVL 719 chr1 17603411 17604115 CR1-D 719 + 17603411 17604115 0 2 645,57, 0,647, +,+, 13279 LINE CR1 719 chr1 17623684 17624441 GGERVL-A-int 565 + 17623684 17624441 0 2 446,311, 0,446, +,+, 13300 LTR ERVL 719 chr1 17633198 17633274 (AATATA)n 418 + 17633198 17633274 0 2 13,23, 0,53, +,+, 13306 Simple_repeat Simple_repeat 720 chr1 17707735 17709669 CR1-C4 490 + 17707735 17709669 0 2 282,1639, 0,295, +,+, 13387 LINE CR1 720 chr1 17727637 17730986 GGLTR8B 167 + 17727637 17730986 0 2 343,371, 0,2978, +,+, 13406 LTR ERVL 720 chr1 17745962 17746599 TguLTR5d 149 + 17745962 17746599 0 2 377,146, 0,491, +,+, 13421 LTR ERVL 720 chr1 17781362 17783468 CR1-D 499 - 17781362 17783468 0 3 1021,74,152, 0,1880,1954, -,-,-, 13454 LINE CR1 720 chr1 17806239 17806659 CR1-F2 833 + 17806239 17806659 0 2 137,283, 0,137, +,+, 13486 LINE CR1 720 chr1 17810646 17810806 (TTCT)n 474 + 17810646 17810806 0 2 8,87, 0,73, +,+, 13489 Simple_repeat Simple_repeat 720 chr1 17818027 17818597 CR1-C3 715 - 17818027 17818597 0 2 91,479, 0,91, -,-, 13498 LINE CR1 720 chr1 17819063 17819176 GGLTR5B 478 + 17819063 17819176 0 2 15,98, 0,15, +,+, 13500 LTR ERVL 721 chr1 17858937 17863697 GGERVL18-int 693 + 17858937 17863697 0 3 3018,1441,288, 0,3031,4472, +,+,+, 13550 LTR ERVL 721 chr1 17903905 17904068 Sat-CR1_GG 510 + 17903905 17904068 0 2 94,18, 0,145, +,+, 13598 Satellite Satellite 721 chr1 17913111 17914106 CR1-Y2_Aves 260 - 17913111 17914106 0 2 404,520, 0,475, -,-, 13612 LINE CR1 721 chr1 17918908 17919477 GGLTR5B 156 + 17918908 17919477 0 2 256,276, 0,293, +,+, 13619 LTR ERVL 721 chr1 17928530 17928581 (TCTATA)n 528 + 17928530 17928581 0 2 7,10, 0,41, +,+, 13628 Simple_repeat Simple_repeat 721 chr1 17951036 17951631 Char12Mar1_GG 525 - 17951036 17951631 0 3 129,83,92, 0,417,503, -,-,-, 13655 DNA hAT-Charlie 722 chr1 18013788 18015780 CR1-F2 607 - 18013788 18015780 0 2 342,761, 0,1231, -,-, 13727 LINE CR1 722 chr1 18014130 18015019 GGLTR12B 636 - 18014130 18015019 0 2 214,658, 0,231, -,-, 13728 LTR ERVL 722 chr1 18052833 18056208 GGLTR10D 947 - 18052833 18056208 0 3 346,2683,346, 0,346,3029, -,-,-, 13784 LTR ERVK 722 chr1 18086114 18086374 GGLTR12A 857 - 18086114 18086374 0 3 59,47,154, 0,59,106, -,-,-, 13817 LTR ERVL 723 chr1 18117081 18117560 CR1-C4 650 - 18117081 18117560 0 2 224,255, 0,224, -,-, 13853 LINE CR1 723 chr1 18117701 18118383 GGLTR8B 207 - 18117701 18118383 0 2 187,296, 0,386, -,-, 13854 LTR ERVL 723 chr1 18118796 18119964 (TTAGGG)n 600 + 18118796 18119964 0 2 172,641, 0,527, +,+, 13855 Simple_repeat Simple_repeat 723 chr1 18126792 18127711 CR1-X2 439 + 18126792 18127711 0 2 87,827, 0,92, +,+, 13868 LINE CR1 723 chr1 18129590 18130549 CR1-C4 614 + 18129590 18130549 0 2 398,561, 0,398, +,+, 13872 LINE CR1 723 chr1 18141756 18142334 CR1-Y2_Aves 150 + 18141756 18142334 0 2 134,303, 0,275, +,+, 13883 LINE CR1 723 chr1 18146994 18147057 (TTGT)n 438 + 18146994 18147057 0 2 7,20, 0,43, +,+, 13890 Simple_repeat Simple_repeat 723 chr1 18166272 18166835 Char12Mar1_GG 599 - 18166272 18166835 0 2 34,241, 0,322, -,-, 13916 DNA hAT-Charlie 723 chr1 18176055 18176445 CR1-E 764 + 18176055 18176445 0 2 43,345, 0,45, +,+, 13932 LINE CR1 723 chr1 18194923 18197058 CR1-X2 143 + 18194923 18197058 0 2 1518,617, 0,1518, +,+, 13955 LINE CR1 723 chr1 18214239 18215682 GGLTR8B 272 - 18214239 18215682 0 2 459,202, 0,1241, -,-, 13981 LTR ERVL 723 chr1 18214718 18215477 GGLTR12C 512 + 18214718 18215477 0 2 111,258, 0,501, +,+, 13982 LTR ERVL 724 chr1 18227534 18229081 CR1-F 482 + 18227534 18229081 0 2 96,539, 0,1008, +,+, 13995 LINE CR1 724 chr1 18231299 18231498 CR1-X 374 - 18231299 18231498 0 2 79,120, 0,79, -,-, 14001 LINE CR1 724 chr1 18252243 18252856 GGERV20_I-int 575 + 18252243 18252856 0 3 313,36,260, 0,313,353, +,+,+, 14032 LTR ERVL 724 chr1 18255403 18257644 CR1-H2 335 + 18255403 18257644 0 2 947,530, 0,1711, +,+, 14038 LINE CR1 724 chr1 18268247 18270476 CR1-X 186 + 18268247 18270476 0 2 259,1408, 0,821, +,+, 14051 LINE CR1 724 chr1 18282913 18283790 ENS1B-LTR 578 - 18282913 18283790 0 2 449,46, 0,831, -,-, 14075 LTR ERVL 724 chr1 18283262 18283747 ENS3-int 502 - 18283262 18283747 0 2 140,345, 0,140, -,-, 14076 LTR ERVL 724 chr1 18283790 18284933 CR1-E 575 - 18283790 18284933 0 2 894,129, 0,1014, -,-, 14077 LINE CR1 724 chr1 18293152 18296132 GGLTR5B 371 + 18293152 18296132 0 3 61,263,85, 0,61,2895, +,+,+, 14091 LTR ERVL 724 chr1 18304213 18304395 (AT)n 494 + 18304213 18304395 0 2 9,120, 0,62, +,+, 14107 Simple_repeat Simple_repeat 724 chr1 18330098 18330400 CR1-D2 422 - 18330098 18330400 0 2 238,64, 0,238, -,-, 14141 LINE CR1 725 chr1 18352039 18352623 GGLTR11 591 - 18352039 18352623 0 2 484,62, 0,522, -,-, 14166 LTR ERV1 725 chr1 18364259 18365459 Mariner1_GG 333 - 18364259 18365459 0 2 274,232, 0,968, -,-, 14178 DNA TcMar-Mariner 725 chr1 18385551 18386880 CR1-B2 798 + 18385551 18386880 0 2 441,112, 0,1217, +,+, 14191 LINE CR1 725 chr1 18412536 18413700 CR1-C4 541 + 18412536 18413700 0 4 200,504,112,252, 0,200,704,912, +,+,+,+, 14215 LINE CR1 725 chr1 18413241 18413451 CR1-C2 631 + 18413241 18413451 0 2 112,98, 0,112, +,+, 14216 LINE CR1 725 chr1 18419293 18420356 CR1-Y2 521 - 18419293 18420356 0 2 949,111, 0,952, -,-, 14222 LINE CR1 725 chr1 18427300 18428035 GGLTR8B 388 + 18427300 18428035 0 2 653,82, 0,653, +,+, 14229 LTR ERVL 725 chr1 18438059 18438121 (AATAA)n 516 + 18438059 18438121 0 2 9,18, 0,44, +,+, 14241 Simple_repeat Simple_repeat 725 chr1 18444994 18445243 CR1-F2 326 - 18444994 18445243 0 2 123,97, 0,152, -,-, 14251 LINE CR1 725 chr1 18463059 18463651 CR1-C4 416 + 18463059 18463651 0 2 277,315, 0,277, +,+, 14272 LINE CR1 725 chr1 18465253 18465759 GGLTR3F2 822 - 18465253 18465759 0 2 75,400, 0,106, -,-, 14273 LTR ERVL 726 chr1 18542338 18543368 GGLTR6 489 + 18542338 18543368 0 3 358,86,62, 0,358,968, +,+,+, 14360 LTR ERVL 726 chr1 18563306 18564651 CR1-C4 552 + 18563306 18564651 0 2 114,168, 0,1177, +,+, 14380 LINE CR1 727 chr1 18627557 18627600 (TATTT)n 562 + 18627557 18627600 0 2 17,6, 0,37, +,+, 14426 Simple_repeat Simple_repeat 727 chr1 18674751 18675330 CR1-F2 611 + 18674751 18675330 0 2 211,265, 0,314, +,+, 14472 LINE CR1 727 chr1 18711453 18712794 CR1-L3A_Croc 156 + 18711453 18712794 0 2 184,645, 0,696, +,+, 14496 LINE CR1 727 chr1 18713406 18714212 GGLTR12C 516 + 18713406 18714212 0 2 107,242, 0,564, +,+, 14498 LTR ERVL 728 chr1 18751420 18752126 CR1-F2 650 + 18751420 18752126 0 2 312,394, 0,312, +,+, 14525 LINE CR1 728 chr1 18754137 18754686 CR1-H 750 + 18754137 18754686 0 2 422,127, 0,422, +,+, 14526 LINE CR1 728 chr1 18811491 18811588 (ACAA)n 282 + 18811491 18811588 0 2 48,10, 0,87, +,+, 14567 Simple_repeat Simple_repeat 728 chr1 18838967 18839032 (A)n 1000 + 18838967 18839032 0 2 21,20, 0,45, +,+, 14588 Simple_repeat Simple_repeat 729 chr1 18881305 18885176 CR1-Y2_Aves 359 - 18881305 18885176 0 2 119,190, 0,3681, -,-, 14612 LINE CR1 729 chr1 18942562 18942960 GGLTR8B 343 - 18942562 18942960 0 2 302,96, 0,302, -,-, 14667 LTR ERVL 729 chr1 18966361 18967021 (TTCC)n 412 + 18966361 18967021 0 2 52,563, 0,97, +,+, 14700 Simple_repeat Simple_repeat 730 chr1 19052532 19053877 CR1-C4 504 + 19052532 19053877 0 2 600,743, 0,602, +,+, 14777 LINE CR1 730 chr1 19087355 19089016 CR1-D2 577 - 19087355 19089016 0 2 920,442, 0,1219, -,-, 14800 LINE CR1 730 chr1 19119467 19123092 CR1-E 799 - 19119467 19123092 0 2 698,63, 0,3562, -,-, 14822 LINE CR1 731 chr1 19171436 19172340 CR1-Y2_Aves 209 - 19171436 19172340 0 2 317,442, 0,462, -,-, 14863 LINE CR1 731 chr1 19180080 19183047 CR1-E 714 + 19180080 19183047 0 2 358,2365, 0,602, +,+, 14873 LINE CR1 731 chr1 19180436 19180686 GGERV10_LTR 842 + 19180436 19180686 0 2 64,81, 0,169, +,+, 14874 LTR ERVL 731 chr1 19186777 19186820 (GTTTT)n 644 + 19186777 19186820 0 2 10,9, 0,34, +,+, 14880 Simple_repeat Simple_repeat 731 chr1 19244014 19245192 CR1-Y2_Aves 192 - 19244014 19245192 0 2 600,540, 0,638, -,-, 14924 LINE CR1 731 chr1 19253132 19255280 CR1-C 232 + 19253132 19255280 0 2 670,526, 0,1622, +,+, 14930 LINE CR1 732 chr1 19314500 19315046 GGLTR5A 361 + 19314500 19315046 0 2 259,107, 0,439, +,+, 14996 LTR ERVL 732 chr1 19318080 19319499 CR1-D2 619 - 19318080 19319499 0 2 178,581, 0,838, -,-, 15000 LINE CR1 732 chr1 19339182 19340823 CR1-F 312 + 19339182 19340823 0 2 257,1213, 0,428, +,+, 15023 LINE CR1 732 chr1 19373202 19373809 CR1-Y1_Aves 232 + 19373202 19373809 0 2 406,201, 0,406, +,+, 15053 LINE CR1 733 chr1 19435141 19436091 CR1-H 852 - 19435141 19436091 0 2 802,148, 0,802, -,-, 15100 LINE CR1 733 chr1 19450142 19450483 CR1-Y1_Aves 400 + 19450142 19450483 0 2 84,247, 0,94, +,+, 15110 LINE CR1 733 chr1 19454565 19455590 CR1-X2 489 + 19454565 19455590 0 3 51,202,771, 0,51,254, +,+,+, 15113 LINE CR1 733 chr1 19506750 19507658 CR1-C2 507 - 19506750 19507658 0 3 31,701,176, 0,31,732, -,-,-, 15165 LINE CR1 733 chr1 19512589 19514714 CR1-C 826 + 19512589 19514714 0 2 1584,541, 0,1584, +,+, 15177 LINE CR1 734 chr1 19532020 19532618 CR1-D2 599 - 19532020 19532618 0 2 313,285, 0,313, -,-, 15201 LINE CR1 734 chr1 19553546 19554052 CR1-Y1_Aves 522 + 19553546 19554052 0 2 260,125, 0,381, +,+, 15225 LINE CR1 734 chr1 19553806 19556071 CR1-Y4 305 + 19553806 19556071 0 3 31,227,349, 0,267,1916, +,+,+, 15227 LINE CR1 734 chr1 19556416 19560595 CR1-D 653 - 19556416 19560595 0 2 2858,1321, 0,2858, -,-, 15230 LINE CR1 734 chr1 19563783 19566171 CR1-C4 403 - 19563783 19566171 0 3 418,929,224, 0,1235,2164, -,-,-, 15234 LINE CR1 734 chr1 19609811 19612200 CR1-Y4 473 - 19609811 19612200 0 2 654,932, 0,1457, -,-, 15269 LINE CR1 91 chr1 19659828 19661255 CR1-C4 523 - 19659828 19661255 0 2 102,351, 0,1076, -,-, 15306 LINE CR1 735 chr1 19681171 19681738 GGLTR8B 314 + 19681171 19681738 0 2 79,110, 0,457, +,+, 15326 LTR ERVL 735 chr1 19692671 19692922 Char12Mar1_GG 617 - 19692671 19692922 0 2 74,177, 0,74, -,-, 15336 DNA hAT-Charlie 735 chr1 19707043 19707578 CR1-L3A_Croc 264 + 19707043 19707578 0 2 157,74, 0,461, +,+, 15349 LINE CR1 735 chr1 19709778 19711011 CR1-F2 306 - 19709778 19711011 0 2 264,969, 0,264, -,-, 15351 LINE CR1 735 chr1 19716836 19718161 CR1-B2 780 - 19716836 19718161 0 2 231,584, 0,741, -,-, 15359 LINE CR1 735 chr1 19722243 19723451 CR1-11_Crp 311 - 19722243 19723451 0 3 369,189,72, 0,374,1136, -,-,-, 15365 LINE CR1 735 chr1 19742964 19744576 CR1-X2 516 - 19742964 19744576 0 2 838,761, 0,851, -,-, 15385 LINE CR1 735 chr1 19753727 19756412 CR1-F2 365 + 19753727 19756412 0 3 399,473,173, 0,1821,2512, +,+,+, 15397 LINE CR1 735 chr1 19760689 19761260 CR1-X2 548 - 19760689 19761260 0 2 201,370, 0,201, -,-, 15405 LINE CR1 735 chr1 19791340 19791801 Mariner1_GG 580 - 19791340 19791801 0 2 56,405, 0,56, -,-, 15432 DNA TcMar-Mariner 736 chr1 19826804 19828668 GGERVL-B-int 329 - 19826804 19828668 0 4 579,421,230,182, 0,579,1013,1682, -,-,-,-, 15457 LTR ERVL 736 chr1 19829275 19834151 GGLTR5A 598 - 19829275 19834151 0 3 100,49,167, 0,116,4709, -,-,-, 15458 LTR ERVL 736 chr1 19854039 19854368 CR1-Y1_Aves 319 - 19854039 19854368 0 2 192,115, 0,214, -,-, 15478 LINE CR1 736 chr1 19873030 19875017 CR1-F2 424 - 19873030 19875017 0 2 232,979, 0,1008, -,-, 15484 LINE CR1 736 chr1 19873259 19874017 CR1-C3 636 + 19873259 19874017 0 2 709,14, 0,744, +,+, 15485 LINE CR1 736 chr1 19892394 19892521 A-rich 606 + 19892394 19892521 0 2 53,34, 0,93, +,+, 15495 Low_complexity Low_complexity 736 chr1 19917341 19917678 Mariner1b_GG 541 - 19917341 19917678 0 2 235,102, 0,235, -,-, 15507 DNA TcMar-Mariner 737 chr1 19954720 19954976 CR1-Y2_Aves 271 + 19954720 19954976 0 2 165,91, 0,165, +,+, 15527 LINE CR1 737 chr1 19992569 19993595 CR1-C4 609 - 19992569 19993595 0 2 316,709, 0,317, -,-, 15549 LINE CR1 737 chr1 20000679 20000905 CR1-Y2_Aves 186 - 20000679 20000905 0 2 103,110, 0,116, -,-, 15553 LINE CR1 738 chr1 20054242 20054637 CR1-F 596 + 20054242 20054637 0 2 339,56, 0,339, +,+, 15587 LINE CR1 738 chr1 20182150 20182567 CR1-Y1_Aves 476 + 20182150 20182567 0 2 265,147, 0,270, +,+, 15663 LINE CR1 739 chr1 20268265 20269194 GGERVL18-int 517 + 20268265 20269194 0 2 250,679, 0,250, +,+, 15705 LTR ERVL 739 chr1 20271483 20282303 GGERVL-B-int 679 + 20271483 20282303 0 3 1302,560,380, 0,7320,10440, +,+,+, 15708 LTR ERVL 739 chr1 20272785 20278815 GGERVL18-int 724 + 20272785 20278815 0 3 293,3794,1024, 0,324,5006, +,+,+, 15709 LTR ERVL 739 chr1 20283082 20285780 ENS3-int 557 + 20283082 20285780 0 2 741,1947, 0,751, +,+, 15719 LTR ERVL 739 chr1 20286663 20287195 CR1-E 724 + 20286663 20287195 0 2 193,334, 0,198, +,+, 15722 LINE CR1 740 chr1 20356441 20357204 CR1-Y4 530 + 20356441 20357204 0 2 210,553, 0,210, +,+, 15749 LINE CR1 741 chr1 20450611 20450813 Char12Mar1_GG 697 - 20450611 20450813 0 2 161,41, 0,161, -,-, 15795 DNA hAT-Charlie 741 chr1 20474935 20475672 GGLTR8A 210 - 20474935 20475672 0 2 181,314, 0,423, -,-, 15810 LTR ERVL 741 chr1 20504636 20506070 CR1-C3 713 + 20504636 20506070 0 2 985,449, 0,985, +,+, 15818 LINE CR1 741 chr1 20525330 20525492 CR1-Y1_Aves 496 + 20525330 20525492 0 2 57,101, 0,61, +,+, 15828 LINE CR1 742 chr1 20613757 20613940 CR1-C2 628 + 20613757 20613940 0 2 166,17, 0,166, +,+, 15864 LINE CR1 742 chr1 20622275 20623230 CR1-L3A_Croc 168 + 20622275 20623230 0 2 148,402, 0,553, +,+, 15870 LINE CR1 743 chr1 20836766 20838329 CR1-D 744 - 20836766 20838329 0 2 634,929, 0,634, -,-, 15970 LINE CR1 744 chr1 20900627 20901669 CR1-Y1_Aves 359 - 20900627 20901669 0 2 169,313, 0,729, -,-, 16005 LINE CR1 745 chr1 20975767 20976707 CR1-D2 625 - 20975767 20976707 0 2 255,211, 0,729, -,-, 16053 LINE CR1 745 chr1 21038082 21041257 CR1-C2 722 - 21038082 21041257 0 2 31,222, 0,2953, -,-, 16097 LINE CR1 746 chr1 21115592 21116241 CR1-X2 496 + 21115592 21116241 0 2 294,352, 0,297, +,+, 16144 LINE CR1 746 chr1 21129453 21130595 CR1-L3A_Croc 270 + 21129453 21130595 0 2 80,332, 0,810, +,+, 16159 LINE CR1 746 chr1 21156024 21158874 CR1-F2 483 + 21156024 21158874 0 3 521,1133,1179, 0,521,1671, +,+,+, 16177 LINE CR1 747 chr1 21267875 21268146 CR1-L3A_Croc 136 - 21267875 21268146 0 2 218,27, 0,244, -,-, 16274 LINE CR1 747 chr1 21298743 21298990 CR1-H 403 + 21298743 21298990 0 2 104,129, 0,118, +,+, 16303 LINE CR1 747 chr1 21322667 21323199 CR1-X2 515 + 21322667 21323199 0 2 78,452, 0,80, +,+, 16321 LINE CR1 747 chr1 21342766 21343900 CR1-11_Crp 169 + 21342766 21343900 0 2 369,190, 0,944, +,+, 16347 LINE CR1 747 chr1 21355943 21356436 GGLTR8B 504 + 21355943 21356436 0 2 270,223, 0,270, +,+, 16365 LTR ERVL 748 chr1 21410621 21411061 CR1-D2 513 - 21410621 21411061 0 2 177,139, 0,301, -,-, 16420 LINE CR1 748 chr1 21426107 21427052 CR1-D2 383 + 21426107 21427052 0 2 223,112, 0,833, +,+, 16436 LINE CR1 748 chr1 21447247 21447861 GGLTR5B 140 + 21447247 21447861 0 2 204,202, 0,412, +,+, 16460 LTR ERVL 748 chr1 21448147 21450314 CR1-Y1_Aves 482 + 21448147 21450314 0 2 626,267, 0,1900, +,+, 16463 LINE CR1 748 chr1 21456431 21457204 GGERVL-A-int 378 + 21456431 21457204 0 2 21,155, 0,618, +,+, 16470 LTR ERVL 749 chr1 21577913 21579007 CR1-F2 835 - 21577913 21579007 0 2 78,1016, 0,78, -,-, 16578 LINE CR1 749 chr1 21581709 21582030 Char12Mar1_GG 649 - 21581709 21582030 0 2 157,150, 0,171, -,-, 16581 DNA hAT-Charlie 749 chr1 21590007 21593158 CR1-X2 571 - 21590007 21593158 0 2 103,486, 0,2665, -,-, 16587 LINE CR1 750 chr1 21684066 21684459 CR1-X2 689 + 21684066 21684459 0 2 57,333, 0,60, +,+, 16643 LINE CR1 750 chr1 21728456 21729303 CR1-Y2_Aves 205 - 21728456 21729303 0 2 493,309, 0,538, -,-, 16683 LINE CR1 750 chr1 21738876 21740477 CR1-D2 653 - 21738876 21740477 0 3 490,406,219, 0,852,1382, -,-,-, 16695 LINE CR1 751 chr1 21779798 21782337 CR1-C4 545 + 21779798 21782337 0 2 1406,100, 0,2439, +,+, 16721 LINE CR1 751 chr1 21790369 21790851 CR1-L3B_Croc 272 - 21790369 21790851 0 2 282,68, 0,414, -,-, 16725 LINE CR1 751 chr1 21853516 21853581 (TTTG)n 678 + 21853516 21853581 0 2 25,6, 0,59, +,+, 16769 Simple_repeat Simple_repeat 751 chr1 21873516 21873607 (ATGATAAT)n 326 + 21873516 21873607 0 2 10,7, 0,84, +,+, 16788 Simple_repeat Simple_repeat 752 chr1 21979525 21981057 CR1-F 492 + 21979525 21981057 0 2 687,820, 0,712, +,+, 16864 LINE CR1 752 chr1 22012989 22013683 CR1-Y1_Aves 451 - 22012989 22013683 0 3 109,341,183, 0,127,511, -,-,-, 16887 LINE CR1 753 chr1 22116279 22116561 CR1-C4 550 - 22116279 22116561 0 2 200,82, 0,200, -,-, 16951 LINE CR1 754 chr1 22195162 22195269 (TTTCC)n 484 + 22195162 22195269 0 2 6,6, 0,101, +,+, 16997 Simple_repeat Simple_repeat 754 chr1 22200066 22200830 CR1-11_Crp 281 - 22200066 22200830 0 3 241,142,88, 0,467,676, -,-,-, 16999 LINE CR1 754 chr1 22207717 22208168 CR1-Y4 662 - 22207717 22208168 0 2 74,377, 0,74, -,-, 17006 LINE CR1 754 chr1 22220400 22222384 CR1-C4 569 + 22220400 22222384 0 3 780,466,730, 0,781,1254, +,+,+, 17015 LINE CR1 754 chr1 22268903 22269223 CR1-X2 403 + 22268903 22269223 0 2 33,60, 0,260, +,+, 17040 LINE CR1 755 chr1 22331773 22331812 (TTTATT)n 428 + 22331773 22331812 0 2 12,10, 0,29, +,+, 17076 Simple_repeat Simple_repeat 755 chr1 22344025 22344103 (TTTTTC)n 498 + 22344025 22344103 0 2 21,8, 0,70, +,+, 17090 Simple_repeat Simple_repeat 755 chr1 22355108 22357536 CR1-X2 239 - 22355108 22357536 0 3 667,996,226, 0,690,2202, -,-,-, 17098 LINE CR1 755 chr1 22394729 22395932 CR1-D2 557 - 22394729 22395932 0 2 202,1001, 0,202, -,-, 17114 LINE CR1 756 chr1 22419625 22420130 TguLTR5e 231 - 22419625 22420130 0 2 139,254, 0,251, -,-, 17131 LTR ERVL 756 chr1 22429991 22430225 Char12Mar1_GG 659 - 22429991 22430225 0 2 158,76, 0,158, -,-, 17138 DNA hAT-Charlie 756 chr1 22441559 22442381 CR1-Y1_Aves 425 + 22441559 22442381 0 2 411,300, 0,522, +,+, 17146 LINE CR1 756 chr1 22443744 22444268 GGLTR8B 220 - 22443744 22444268 0 2 387,137, 0,387, -,-, 17149 LTR ERVL 756 chr1 22480618 22481063 GGLTR8A 398 - 22480618 22481063 0 2 150,294, 0,151, -,-, 17180 LTR ERVL 756 chr1 22524523 22526339 CR1-Y2_Aves 357 + 22524523 22526339 0 2 307,984, 0,832, +,+, 17199 LINE CR1 757 chr1 22569561 22570447 CR1-C4 582 - 22569561 22570447 0 2 511,375, 0,511, -,-, 17226 LINE CR1 757 chr1 22573524 22573632 (A)n 863 + 22573524 22573632 0 2 24,36, 0,72, +,+, 17228 Simple_repeat Simple_repeat 757 chr1 22585305 22585378 (TTGT)n 322 + 22585305 22585378 0 2 11,32, 0,41, +,+, 17235 Simple_repeat Simple_repeat 757 chr1 22608227 22609548 CR1-F 671 - 22608227 22609548 0 2 201,1120, 0,201, -,-, 17248 LINE CR1 758 chr1 22681796 22682597 CR1-D2 571 - 22681796 22682597 0 2 65,393, 0,408, -,-, 17282 LINE CR1 758 chr1 22748064 22748114 (TGCTTTT)n 554 + 22748064 22748114 0 2 12,10, 0,40, +,+, 17317 Simple_repeat Simple_repeat 758 chr1 22759553 22760532 CR1-L3B_Croc 124 + 22759553 22760532 0 2 435,283, 0,696, +,+, 17326 LINE CR1 760 chr1 22952611 22953349 CR1-F 880 + 22952611 22953349 0 2 248,490, 0,248, +,+, 17413 LINE CR1 760 chr1 23005775 23008516 Char12Mar1_GG 717 - 23005775 23008516 0 2 556,229, 0,2512, -,-, 17444 DNA hAT-Charlie 760 chr1 23034732 23034914 (GTGC)n 282 + 23034732 23034914 0 2 112,21, 0,161, +,+, 17466 Simple_repeat Simple_repeat 761 chr1 23078071 23081419 CR1-C3 603 - 23078071 23081419 0 2 1766,959, 0,2389, -,-, 17491 LINE CR1 761 chr1 23110430 23111022 CR1-Y1_Aves 421 + 23110430 23111022 0 2 411,171, 0,421, +,+, 17514 LINE CR1 761 chr1 23121945 23123540 CR1-D2 693 + 23121945 23123540 0 2 70,299, 0,1296, +,+, 17517 LINE CR1 761 chr1 23178700 23181020 CR1-F2 597 + 23178700 23181020 0 2 1756,557, 0,1763, +,+, 17548 LINE CR1 762 chr1 23204174 23205529 CR1-Y2_Aves 303 + 23204174 23205529 0 2 413,927, 0,428, +,+, 17569 LINE CR1 763 chr1 23418464 23419090 TguLTR5d 323 + 23418464 23419090 0 2 328,135, 0,491, +,+, 17672 LTR ERVL 763 chr1 23457892 23459117 CR1-X2 639 - 23457892 23459117 0 2 662,66, 0,1159, -,-, 17693 LINE CR1 764 chr1 23491859 23492969 CR1-E 742 - 23491859 23492969 0 2 719,362, 0,748, -,-, 17713 LINE CR1 765 chr1 23662130 23663662 GGLTR8B 482 - 23662130 23663662 0 2 151,226, 0,1306, -,-, 17825 LTR ERVL 766 chr1 23724257 23724845 GGLTR5A 372 - 23724257 23724845 0 2 139,375, 0,213, -,-, 17873 LTR ERVL 766 chr1 23724857 23726179 CR1-Y2_Aves 285 + 23724857 23726179 0 3 591,171,539, 0,591,783, +,+,+, 17875 LINE CR1 766 chr1 23786374 23786534 G-rich 447 + 23786374 23786534 0 2 51,77, 0,83, +,+, 17914 Low_complexity Low_complexity 767 chr1 23875791 23876633 CR1-Y1_Aves 352 + 23875791 23876633 0 2 591,128, 0,714, +,+, 17998 LINE CR1 767 chr1 23918472 23919151 X13_LINE 193 + 23918472 23919151 0 2 235,120, 0,559, +,+, 18034 LINE L2 767 chr1 23926348 23929076 CR1-Y3 549 - 23926348 23929076 0 2 557,1257, 0,1471, -,-, 18040 LINE CR1 767 chr1 23934371 23934709 TguLTR5e 379 + 23934371 23934709 0 2 256,80, 0,258, +,+, 18049 LTR ERVL 767 chr1 23953169 23954206 CR1-C4 594 - 23953169 23954206 0 2 549,484, 0,553, -,-, 18069 LINE CR1 768 chr1 24000131 24000469 CR1-Y1_Aves 373 + 24000131 24000469 0 2 182,117, 0,221, +,+, 18105 LINE CR1 768 chr1 24014544 24014970 GGLTR5A 378 + 24014544 24014970 0 2 235,174, 0,252, +,+, 18112 LTR ERVL 768 chr1 24036859 24037628 CR1-X2 219 - 24036859 24037628 0 2 236,495, 0,274, -,-, 18126 LINE CR1 768 chr1 24041021 24041260 GGLTR8A 607 - 24041021 24041260 0 2 58,147, 0,92, -,-, 18130 LTR ERVL 768 chr1 24047213 24049358 CR1-C4 471 - 24047213 24049358 0 3 381,431,857, 0,857,1288, -,-,-, 18137 LINE CR1 768 chr1 24097305 24111144 Char12Mar1_GG 707 - 24097305 24111144 0 2 210,45, 0,13794, -,-, 18185 DNA hAT-Charlie 769 chr1 24131378 24132688 CR1-H2 247 - 24131378 24132688 0 2 506,787, 0,523, -,-, 18214 LINE CR1 769 chr1 24183316 24183880 CR1-C4 626 + 24183316 24183880 0 2 458,106, 0,458, +,+, 18255 LINE CR1 769 chr1 24192931 24193438 CR1-C2 846 + 24192931 24193438 0 2 195,248, 0,259, +,+, 18265 LINE CR1 769 chr1 24215835 24220592 CR1-X1 563 + 24215835 24220592 0 3 1591,216,425, 0,4116,4332, +,+,+, 18274 LINE CR1 769 chr1 24238060 24238380 Char12Mar1_GG 720 - 24238060 24238380 0 2 120,200, 0,120, -,-, 18292 DNA hAT-Charlie 769 chr1 24246092 24246712 CR1-Y1_Aves 354 - 24246092 24246712 0 2 139,451, 0,169, -,-, 18295 LINE CR1 770 chr1 24258488 24267124 Char12Mar1_GG 636 - 24258488 24267124 0 2 159,52, 0,8584, -,-, 18305 DNA hAT-Charlie 770 chr1 24285881 24292416 Char12Mar1_GG 692 - 24285881 24292416 0 3 182,252,654, 0,1563,5881, -,-,-, 18324 DNA hAT-Charlie 770 chr1 24286099 24287394 CR1-F 554 - 24286099 24287394 0 2 979,316, 0,979, -,-, 18325 LINE CR1 770 chr1 24302384 24302994 CR1-B2 269 + 24302384 24302994 0 2 411,69, 0,541, +,+, 18333 LINE CR1 770 chr1 24323943 24324309 (AT)n 605 + 24323943 24324309 0 2 239,69, 0,297, +,+, 18349 Simple_repeat Simple_repeat 770 chr1 24325184 24325237 (TGTA)n 412 + 24325184 24325237 0 2 8,15, 0,38, +,+, 18350 Simple_repeat Simple_repeat 771 chr1 24387072 24388044 Char12Mar1_GG 532 - 24387072 24388044 0 2 655,316, 0,656, -,-, 18382 DNA hAT-Charlie 771 chr1 24470715 24471287 CR1-L3A_Croc 281 - 24470715 24471287 0 2 116,382, 0,190, -,-, 18413 LINE CR1 772 chr1 24553975 24554266 CR1-F0 581 - 24553975 24554266 0 2 47,244, 0,47, -,-, 18451 LINE CR1 773 chr1 24733791 24739060 CR1-11_Crp 187 + 24733791 24739060 0 2 219,309, 0,4960, +,+, 18557 LINE CR1 775 chr1 24922946 24923381 CR1-Y2_Aves 432 - 24922946 24923381 0 2 344,91, 0,344, -,-, 18643 LINE CR1 775 chr1 24938565 24938914 CR1-Y2_Aves 249 + 24938565 24938914 0 2 230,85, 0,264, +,+, 18653 LINE CR1 776 chr1 25044461 25044991 GGLTR3F1 938 - 25044461 25044991 0 2 494,36, 0,494, -,-, 18699 LTR ERVL 776 chr1 25044991 25050808 GGLTR3F1 901 - 25044991 25050808 0 2 5322,494, 0,5323, -,-, 18700 LTR ERVL 777 chr1 25186044 25186543 TguLTR5e 180 + 25186044 25186543 0 2 225,198, 0,301, +,+, 18763 LTR ERVL 777 chr1 25190768 25191232 CR1-C4 544 + 25190768 25191232 0 2 87,371, 0,93, +,+, 18767 LINE CR1 777 chr1 25206417 25207405 CR1-D2 440 + 25206417 25207405 0 2 552,135, 0,853, +,+, 18777 LINE CR1 777 chr1 25261127 25261602 CR1-E 334 - 25261127 25261602 0 2 121,293, 0,182, -,-, 18811 LINE CR1 777 chr1 25261763 25262554 CR1-Y2_Aves 316 + 25261763 25262554 0 2 243,536, 0,255, +,+, 18813 LINE CR1 778 chr1 25327073 25327498 CR1-E 748 - 25327073 25327498 0 2 222,151, 0,274, -,-, 18849 LINE CR1 778 chr1 25331094 25331893 CR1-11_Crp 229 + 25331094 25331893 0 2 562,128, 0,671, +,+, 18853 LINE CR1 778 chr1 25333995 25334628 GGLTR5B 376 - 25333995 25334628 0 2 201,406, 0,227, -,-, 18855 LTR ERVL 778 chr1 25347525 25347933 GGLTR5B 310 - 25347525 25347933 0 2 186,145, 0,263, -,-, 18865 LTR ERVL 778 chr1 25404832 25405306 GGLTR5A 359 - 25404832 25405306 0 2 192,264, 0,210, -,-, 18904 LTR ERVL 778 chr1 25421824 25422701 CR1-H2 682 + 25421824 25422701 0 2 131,261, 0,616, +,+, 18914 LINE CR1 779 chr1 25478790 25480443 CR1-E 337 - 25478790 25480443 0 2 552,1086, 0,567, -,-, 18953 LINE CR1 779 chr1 25508122 25508380 CR1-C4 733 - 25508122 25508380 0 2 165,93, 0,165, -,-, 18982 LINE CR1 780 chr1 25615893 25618001 Charlie12_GG 509 - 25615893 25618001 0 2 1475,303, 0,1805, -,-, 19057 DNA hAT-Charlie 780 chr1 25631719 25632214 GGLTR3F1 930 + 25631719 25632214 0 2 231,211, 0,284, +,+, 19067 LTR ERVL 780 chr1 25656024 25656797 CR1-H 113 - 25656024 25656797 0 3 13,125,96, 0,463,677, -,-,-, 19083 LINE CR1 780 chr1 25668454 25669051 CR1-F2 410 + 25668454 25669051 0 2 308,289, 0,308, +,+, 19097 LINE CR1 781 chr1 25713768 25714249 GGLTR5A 254 + 25713768 25714249 0 2 245,219, 0,262, +,+, 19130 LTR ERVL 781 chr1 25742237 25742374 Char12Mar1_GG 720 - 25742237 25742374 0 2 65,57, 0,80, -,-, 19146 DNA hAT-Charlie 781 chr1 25758653 25759699 CR1-L3B_Croc 185 - 25758653 25759699 0 2 337,404, 0,642, -,-, 19158 LINE CR1 782 chr1 25880708 25881225 Char12Mar1_GG 566 - 25880708 25881225 0 2 266,66, 0,451, -,-, 19218 DNA hAT-Charlie 782 chr1 25911688 25911760 (TGTTT)n 658 + 25911688 25911760 0 2 7,29, 0,43, +,+, 19243 Simple_repeat Simple_repeat 783 chr1 25952335 25952781 Char12Mar1_GG 665 - 25952335 25952781 0 2 224,215, 0,231, -,-, 19274 DNA hAT-Charlie 783 chr1 25964052 25964456 Char12Mar1_GG 707 - 25964052 25964456 0 2 227,177, 0,227, -,-, 19279 DNA hAT-Charlie 783 chr1 26023629 26024010 Char12Mar1_GG 735 - 26023629 26024010 0 2 74,307, 0,74, -,-, 19312 DNA hAT-Charlie 783 chr1 26052120 26053284 CR1-Y4 350 - 26052120 26053284 0 2 339,663, 0,501, -,-, 19325 LINE CR1 784 chr1 26148915 26149030 Char12Mar1_GG 758 - 26148915 26149030 0 2 60,55, 0,60, -,-, 19384 DNA hAT-Charlie 785 chr1 26237276 26237733 CR1-L3B_Croc 337 - 26237276 26237733 0 2 140,301, 0,156, -,-, 19443 LINE CR1 785 chr1 26268839 26269328 CR1-X2 304 - 26268839 26269328 0 2 124,245, 0,244, -,-, 19460 LINE CR1 785 chr1 26292760 26292836 A-rich 398 + 26292760 26292836 0 2 14,24, 0,52, +,+, 19474 Low_complexity Low_complexity 785 chr1 26298609 26301081 CR1-Y1_Aves 429 - 26298609 26301081 0 2 885,1291, 0,1181, -,-, 19478 LINE CR1 785 chr1 26327508 26328312 CR1-L3A_Croc 191 + 26327508 26328312 0 2 259,234, 0,570, +,+, 19497 LINE CR1 786 chr1 26377455 26378342 CR1-11_Crp 207 - 26377455 26378342 0 2 142,532, 0,355, -,-, 19530 LINE CR1 786 chr1 26416050 26417867 Char12Mar1_GG 564 - 26416050 26417867 0 3 99,900,145, 0,769,1672, -,-,-, 19547 DNA hAT-Charlie 786 chr1 26439533 26440186 CR1-D 689 - 26439533 26440186 0 2 244,395, 0,258, -,-, 19566 LINE CR1 786 chr1 26451435 26452910 CR1-C4 450 - 26451435 26452910 0 2 878,597, 0,878, -,-, 19575 LINE CR1 787 chr1 26559148 26559695 CR1-E 467 - 26559148 26559695 0 2 384,163, 0,384, -,-, 19636 LINE CR1 787 chr1 26583863 26584233 GGLTR5A 379 - 26583863 26584233 0 2 99,253, 0,117, -,-, 19651 LTR ERVL 788 chr1 26613115 26613646 CR1-Y1_Aves 504 - 26613115 26613646 0 2 384,145, 0,386, -,-, 19670 LINE CR1 789 chr1 26781622 26782362 CR1-F2 471 - 26781622 26782362 0 2 562,178, 0,562, -,-, 19744 LINE CR1 790 chr1 26885343 26887243 CR1-C4 674 + 26885343 26887243 0 2 99,1801, 0,99, +,+, 19802 LINE CR1 790 chr1 26993415 26995603 CR1-Y4 616 - 26993415 26995603 0 3 1192,458,165, 0,1192,2023, -,-,-, 19855 LINE CR1 791 chr1 27059267 27059630 GGLTR8B 281 - 27059267 27059630 0 2 238,91, 0,272, -,-, 19877 LTR ERVL 792 chr1 27151742 27152590 CR1-Y3 671 + 27151742 27152590 0 2 142,198, 0,650, +,+, 19921 LINE CR1 792 chr1 27163774 27164591 CR1-X1 508 + 27163774 27164591 0 2 69,548, 0,269, +,+, 19927 LINE CR1 792 chr1 27177997 27178041 (TGTATA)n 488 + 27177997 27178041 0 2 8,9, 0,35, +,+, 19934 Simple_repeat Simple_repeat 792 chr1 27193202 27196105 CR1-D2 685 + 27193202 27196105 0 4 502,1109,100,215, 0,942,2051,2688, +,+,+,+, 19942 LINE CR1 792 chr1 27193712 27194127 GGLTR10C-int 906 - 27193712 27194127 0 2 347,68, 0,347, -,-, 19943 LTR ERVK 792 chr1 27205129 27206123 CR1-C4 506 - 27205129 27206123 0 2 80,236, 0,758, -,-, 19951 LINE CR1 792 chr1 27257922 27259429 Char12Mar1_GG 572 - 27257922 27259429 0 2 337,268, 0,1239, -,-, 19974 DNA hAT-Charlie 793 chr1 27291803 27293202 Char12Mar1_GG 625 - 27291803 27293202 0 2 34,483, 0,916, -,-, 19994 DNA hAT-Charlie 794 chr1 27487544 27489224 CR1-Y 863 - 27487544 27489224 0 2 364,115, 0,1565, -,-, 20118 LINE CR1 795 chr1 27546893 27547436 Char12Mar1_GG 689 - 27546893 27547436 0 4 94,52,44,51, 0,345,448,492, -,-,-,-, 20157 DNA hAT-Charlie 795 chr1 27634587 27635895 Char12Mar1_GG 642 - 27634587 27635895 0 2 195,194, 0,1114, -,-, 20228 DNA hAT-Charlie 795 chr1 27653022 27654309 CR1-E 685 + 27653022 27654309 0 2 255,369, 0,918, +,+, 20249 LINE CR1 796 chr1 27674016 27675274 Char12Mar1_GG 658 - 27674016 27675274 0 2 195,189, 0,1069, -,-, 20263 DNA hAT-Charlie 796 chr1 27709473 27710773 GGLTR8A 588 - 27709473 27710773 0 2 179,535, 0,765, -,-, 20291 LTR ERVL 796 chr1 27766843 27767681 Mariner1_GG 575 - 27766843 27767681 0 2 488,348, 0,490, -,-, 20333 DNA TcMar-Mariner 796 chr1 27774410 27774665 UCON8 315 - 27774410 27774665 0 2 80,173, 0,82, -,-, 20337 DNA DNA 797 chr1 27814012 27815068 CR1-Y2 86 + 27814012 27815068 0 2 477,311, 0,745, +,+, 20371 LINE CR1 797 chr1 27824490 27825926 CR1-Y3 567 - 27824490 27825926 0 2 275,588, 0,848, -,-, 20382 LINE CR1 797 chr1 27830638 27832052 CR1-F 358 + 27830638 27832052 0 2 635,188, 0,1226, +,+, 20386 LINE CR1 797 chr1 27831252 27831700 CR1-F2 580 + 27831252 27831700 0 2 285,163, 0,285, +,+, 20387 LINE CR1 797 chr1 27844392 27845779 REP131 267 - 27844392 27845779 0 3 242,75,105, 0,261,1282, -,-,-, 20397 DNA? DNA? 797 chr1 27890888 27892842 CR1-H2 475 + 27890888 27892842 0 2 905,1044, 0,910, +,+, 20430 LINE CR1 798 chr1 27940781 27941375 CR1-Y3 683 - 27940781 27941375 0 2 312,282, 0,312, -,-, 20473 LINE CR1 798 chr1 27947041 27947420 GGLTR5A 601 + 27947041 27947420 0 2 102,277, 0,102, +,+, 20477 LTR ERVL 798 chr1 27968466 27968831 (GGGAA)n 791 + 27968466 27968831 0 2 172,181, 0,184, +,+, 20493 Simple_repeat Simple_repeat 798 chr1 27976988 27977642 CR1-Y2 790 + 27976988 27977642 0 2 55,595, 0,59, +,+, 20501 LINE CR1 798 chr1 27994356 27995805 CR1-X2 508 - 27994356 27995805 0 2 876,562, 0,887, -,-, 20514 LINE CR1 798 chr1 28014477 28015985 CR1-X2 138 + 28014477 28015985 0 2 118,1254, 0,254, +,+, 20529 LINE CR1 799 chr1 28059241 28060358 CR1-F2 558 + 28059241 28060358 0 2 380,731, 0,386, +,+, 20560 LINE CR1 799 chr1 28062599 28063334 CR1-H 658 + 28062599 28063334 0 2 219,335, 0,400, +,+, 20563 LINE CR1 799 chr1 28072464 28074369 CR1-X1 504 + 28072464 28074369 0 4 1035,291,436,143, 0,1035,1326,1762, +,+,+,+, 20571 LINE CR1 799 chr1 28106681 28107118 GGLTR5B 457 + 28106681 28107118 0 2 300,87, 0,350, +,+, 20596 LTR ERVL 799 chr1 28141612 28143779 CR1-Y 776 + 28141612 28143779 0 2 1554,613, 0,1554, +,+, 20627 LINE CR1 799 chr1 28143919 28144974 CR1-Y2_Aves 319 + 28143919 28144974 0 2 319,288, 0,767, +,+, 20628 LINE CR1 799 chr1 28144187 28144682 CR1-Y1_Aves 380 - 28144187 28144682 0 2 368,101, 0,394, -,-, 20629 LINE CR1 799 chr1 28162950 28165814 CR1-H 541 + 28162950 28165814 0 2 788,2076, 0,788, +,+, 20642 LINE CR1 800 chr1 28208773 28211173 GGERVL-A-int 561 - 28208773 28211173 0 4 553,73,1077,364, 0,560,959,2036, -,-,-,-, 20674 LTR ERVL 800 chr1 28211897 28213530 CR1-X2 432 + 28211897 28213530 0 3 445,159,983, 0,491,650, +,+,+, 20676 LINE CR1 800 chr1 28215808 28216666 CR1-X2 547 - 28215808 28216666 0 2 779,61, 0,797, -,-, 20678 LINE CR1 800 chr1 28217363 28218355 CR1-H2 429 - 28217363 28218355 0 2 59,317, 0,675, -,-, 20679 LINE CR1 800 chr1 28220850 28221850 GGERVL-B-int 369 + 28220850 28221850 0 3 248,152,172, 0,255,828, +,+,+, 20683 LTR ERVL 800 chr1 28224108 28224840 CR1-C3 689 + 28224108 28224840 0 2 107,625, 0,107, +,+, 20686 LINE CR1 800 chr1 28270226 28285246 Char12Mar1_GG 533 - 28270226 28285246 0 2 520,95, 0,14925, -,-, 20720 DNA hAT-Charlie 800 chr1 28274345 28277790 CR1-D2 476 + 28274345 28277790 0 3 1422,192,193, 0,2542,3252, +,+,+, 20725 LINE CR1 800 chr1 28305990 28306903 CR1-X2 459 + 28305990 28306903 0 2 248,663, 0,250, +,+, 20753 LINE CR1 801 chr1 28342100 28342620 CR1-D2 632 - 28342100 28342620 0 2 317,201, 0,319, -,-, 20781 LINE CR1 802 chr1 28496133 28496691 CR1-D2 717 - 28496133 28496691 0 2 249,233, 0,325, -,-, 20878 LINE CR1 802 chr1 28537823 28539692 CR1-C3 558 - 28537823 28539692 0 2 928,941, 0,928, -,-, 20909 LINE CR1 802 chr1 28554093 28554612 CR1-Y2_Aves 113 - 28554093 28554612 0 2 142,308, 0,211, -,-, 20917 LINE CR1 804 chr1 28726750 28726809 (GGTTT)n 418 + 28726750 28726809 0 2 14,11, 0,48, +,+, 21006 Simple_repeat Simple_repeat 804 chr1 28759030 28761295 Charlie12_GG 764 - 28759030 28761295 0 2 1737,109, 0,2156, -,-, 21029 DNA hAT-Charlie 804 chr1 28767430 28768971 CR1-D2 567 - 28767430 28768971 0 3 58,167,1161, 0,78,380, -,-,-, 21039 LINE CR1 805 chr1 28844925 28847448 CR1-C4 528 - 28844925 28847448 0 2 225,2294, 0,229, -,-, 21073 LINE CR1 805 chr1 28854014 28854564 L2-1_AMi 298 - 28854014 28854564 0 2 211,168, 0,382, -,-, 21078 LINE L2 806 chr1 28980157 28981331 CR1-L3B_Croc 206 - 28980157 28981331 0 2 200,252, 0,922, -,-, 21149 LINE CR1 807 chr1 29105038 29105609 CR1-C4 531 + 29105038 29105609 0 2 91,264, 0,307, +,+, 21217 LINE CR1 808 chr1 29230019 29230472 CR1-8_Crp 268 + 29230019 29230472 0 2 131,298, 0,155, +,+, 21296 LINE CR1 808 chr1 29242304 29242687 Char12Mar1_GG 770 - 29242304 29242687 0 2 95,281, 0,102, -,-, 21302 DNA hAT-Charlie 808 chr1 29351306 29352461 CR1-L3B_Croc 213 - 29351306 29352461 0 3 148,300,214, 0,311,941, -,-,-, 21366 LINE CR1 809 chr1 29383844 29384364 CR1-Y1_Aves 510 - 29383844 29384364 0 2 78,442, 0,78, -,-, 21386 LINE CR1 809 chr1 29404471 29405417 CR1-F 900 + 29404471 29405417 0 2 388,558, 0,388, +,+, 21393 LINE CR1 809 chr1 29441054 29442272 Mariner1_GG 652 - 29441054 29442272 0 2 743,474, 0,744, -,-, 21422 DNA TcMar-Mariner 809 chr1 29457455 29458866 CR1-L3B_Croc 212 + 29457455 29458866 0 2 270,550, 0,861, +,+, 21429 LINE CR1 809 chr1 29475254 29475372 tRNA-Leu-TTG 723 + 29475254 29475372 0 2 38,49, 0,69, +,+, 21439 tRNA tRNA 810 chr1 29532396 29532811 AmnSINE1 354 - 29532396 29532811 0 2 164,122, 0,293, -,-, 21470 SINE 5S-Deu-L2 810 chr1 29585201 29585514 GGLTR5B 481 + 29585201 29585514 0 2 140,88, 0,225, +,+, 21507 LTR ERVL 811 chr1 29665978 29666452 CR1-X2 665 - 29665978 29666452 0 2 52,310, 0,164, -,-, 21538 LINE CR1 811 chr1 29691253 29691836 CR1-C4 640 - 29691253 29691836 0 2 125,241, 0,342, -,-, 21548 LINE CR1 813 chr1 29911840 29912627 CR1-Y2_Aves 231 + 29911840 29912627 0 2 529,175, 0,612, +,+, 21646 LINE CR1 813 chr1 29912715 29913188 CR1-L3A_Croc 216 - 29912715 29913188 0 2 81,329, 0,144, -,-, 21647 LINE CR1 814 chr1 30057852 30058670 CR1-Y4 208 - 30057852 30058670 0 2 296,323, 0,495, -,-, 21703 LINE CR1 814 chr1 30110385 30110817 TguLTR5e 466 + 30110385 30110817 0 2 251,71, 0,361, +,+, 21732 LTR ERVL 816 chr1 30285591 30286934 CR1-F2 455 + 30285591 30286934 0 2 658,629, 0,714, +,+, 21832 LINE CR1 816 chr1 30327216 30328099 CR1-C4 662 + 30327216 30328099 0 3 49,185,121, 0,66,762, +,+,+, 21853 LINE CR1 816 chr1 30375573 30375845 CR1-Y2_Aves 500 + 30375573 30375845 0 2 57,157, 0,115, +,+, 21870 LINE CR1 817 chr1 30411399 30411878 TguLTR5e 251 - 30411399 30411878 0 2 92,360, 0,119, -,-, 21884 LTR ERVL 817 chr1 30477087 30477419 CR1-F2 518 - 30477087 30477419 0 2 177,98, 0,234, -,-, 21933 LINE CR1 817 chr1 30511529 30512955 GGERVL-B-int 332 - 30511529 30512955 0 2 1234,102, 0,1324, -,-, 21953 LTR ERVL 818 chr1 30570321 30571031 CR1-Y2_Aves 300 + 30570321 30571031 0 2 103,279, 0,431, +,+, 21990 LINE CR1 818 chr1 30602527 30603151 CR1-D2 650 - 30602527 30603151 0 2 124,500, 0,124, -,-, 22008 LINE CR1 822 chr1 31149800 31151642 Char12Mar1_GG 706 - 31149800 31151642 0 3 221,230,56, 0,885,1786, -,-,-, 22287 DNA hAT-Charlie 822 chr1 31193373 31193644 CR1-D2 689 + 31193373 31193644 0 2 97,115, 0,156, +,+, 22307 LINE CR1 823 chr1 31251239 31251736 GGLTR8A 529 + 31251239 31251736 0 2 86,411, 0,86, +,+, 22356 LTR ERVL 824 chr1 31329414 31329464 (TGTTT)n 392 + 31329414 31329464 0 2 14,15, 0,35, +,+, 22419 Simple_repeat Simple_repeat 824 chr1 31334724 31335270 GGLTR5B 536 - 31334724 31335270 0 2 169,348, 0,198, -,-, 22424 LTR ERVL 824 chr1 31378714 31379704 CR1-D2 629 + 31378714 31379704 0 2 852,123, 0,867, +,+, 22455 LINE CR1 824 chr1 31396138 31396660 GGLTR5B 263 + 31396138 31396660 0 2 182,170, 0,352, +,+, 22475 LTR ERVL 824 chr1 31449876 31450760 CR1-Y2_Aves 233 - 31449876 31450760 0 2 283,551, 0,333, -,-, 22494 LINE CR1 825 chr1 31476017 31476064 (TTTCT)n 536 + 31476017 31476064 0 2 14,6, 0,41, +,+, 22509 Simple_repeat Simple_repeat 825 chr1 31485602 31486450 CR1-Y2_Aves 231 - 31485602 31486450 0 2 591,257, 0,591, -,-, 22516 LINE CR1 825 chr1 31500890 31501407 GGLTR5A 538 - 31500890 31501407 0 2 158,294, 0,223, -,-, 22526 LTR ERVL 825 chr1 31519227 31519740 CR1-X2 575 - 31519227 31519740 0 2 465,48, 0,465, -,-, 22540 LINE CR1 825 chr1 31579783 31580657 Mariner1_GG 606 - 31579783 31580657 0 2 288,586, 0,288, -,-, 22588 DNA TcMar-Mariner 826 chr1 31599352 31599747 GGLTR8B 379 + 31599352 31599747 0 2 232,149, 0,246, +,+, 22605 LTR ERVL 827 chr1 31789908 31790717 CR1-Y1_Aves 445 + 31789908 31790717 0 2 99,710, 0,99, +,+, 22758 LINE CR1 827 chr1 31802631 31803166 Char12Mar1_GG 305 - 31802631 31803166 0 2 336,166, 0,369, -,-, 22770 DNA hAT-Charlie 828 chr1 31874111 31874202 (CCTT)n 456 + 31874111 31874202 0 2 7,49, 0,42, +,+, 22820 Simple_repeat Simple_repeat 828 chr1 31891999 31893220 CR1-L3B_Croc 117 - 31891999 31893220 0 2 287,502, 0,719, -,-, 22841 LINE CR1 828 chr1 31920730 31921041 CR1-Y2_Aves 208 + 31920730 31921041 0 2 189,122, 0,189, +,+, 22874 LINE CR1 828 chr1 31934799 31940625 GGERV10_LTR 971 - 31934799 31940625 0 3 220,5374,231, 0,220,5595, -,-,-, 22886 LTR ERVL 828 chr1 31946715 31948394 GGLTR3F2 706 + 31946715 31948394 0 2 75,417, 0,1262, +,+, 22894 LTR ERVL 828 chr1 31957050 31959121 CR1-F2 641 + 31957050 31959121 0 2 1490,577, 0,1494, +,+, 22903 LINE CR1 829 chr1 32019773 32022261 Char12Mar1_GG 692 - 32019773 32022261 0 2 38,315, 0,2173, -,-, 22959 DNA hAT-Charlie 829 chr1 32035288 32035348 (TCTT)n 340 + 32035288 32035348 0 2 31,6, 0,54, +,+, 22974 Simple_repeat Simple_repeat 829 chr1 32051794 32051880 (T)n 1000 + 32051794 32051880 0 2 28,25, 0,61, +,+, 22993 Simple_repeat Simple_repeat 830 chr1 32168948 32170387 CR1-F2 397 - 32168948 32170387 0 2 171,1236, 0,203, -,-, 23097 LINE CR1 830 chr1 32177029 32177853 CR1-Y4 473 + 32177029 32177853 0 3 141,567,106, 0,141,718, +,+,+, 23101 LINE CR1 830 chr1 32195369 32198463 CR1-Y1_Aves 418 - 32195369 32198463 0 2 71,520, 0,2574, -,-, 23114 LINE CR1 830 chr1 32196402 32197924 CR1-G 280 - 32196402 32197924 0 2 341,1181, 0,341, -,-, 23116 LINE CR1 830 chr1 32200336 32201205 GGLTR12C 581 - 32200336 32201205 0 2 212,657, 0,212, -,-, 23120 LTR ERVL 830 chr1 32201205 32202991 CR1-D 651 + 32201205 32202991 0 2 539,858, 0,928, +,+, 23122 LINE CR1 830 chr1 32212288 32212988 CR1-L3B_Croc 138 - 32212288 32212988 0 2 258,167, 0,533, -,-, 23132 LINE CR1 831 chr1 32266369 32267603 CR1-D2 550 + 32266369 32267603 0 3 594,87,204, 0,595,1030, +,+,+, 23195 LINE CR1 831 chr1 32268809 32269800 CR1-Y4 481 + 32268809 32269800 0 2 837,154, 0,837, +,+, 23198 LINE CR1 831 chr1 32288333 32288427 A-rich 334 + 32288333 32288427 0 2 32,21, 0,73, +,+, 23215 Low_complexity Low_complexity 831 chr1 32299348 32300983 Char12Mar1_GG 556 - 32299348 32300983 0 3 920,152,314, 0,1104,1321, -,-,-, 23231 DNA hAT-Charlie 831 chr1 32344763 32349602 CR1-C4 373 + 32344763 32349602 0 3 286,1112,116, 0,3611,4723, +,+,+, 23274 LINE CR1 831 chr1 32361434 32364720 CR1-D 664 + 32361434 32364720 0 2 2700,580, 0,2706, +,+, 23285 LINE CR1 831 chr1 32370887 32371926 CR1-C4 477 - 32370887 32371926 0 2 200,202, 0,837, -,-, 23292 LINE CR1 831 chr1 32372993 32374496 CR1-D2 584 + 32372993 32374496 0 2 325,688, 0,815, +,+, 23294 LINE CR1 832 chr1 32390077 32393433 GGLTR10D 939 + 32390077 32393433 0 3 343,2667,346, 0,343,3010, +,+,+, 23311 LTR ERVK 832 chr1 32411402 32412023 GGLTR11-int 420 + 32411402 32412023 0 2 120,189, 0,432, +,+, 23328 LTR ERV1 832 chr1 32451733 32452787 CR1-Y3 634 - 32451733 32452787 0 2 415,435, 0,619, -,-, 23367 LINE CR1 833 chr1 32520032 32522347 CR1-D 702 + 32520032 32522347 0 2 1419,896, 0,1419, +,+, 23439 LINE CR1 833 chr1 32589321 32590063 GGERVL-A-int 247 + 32589321 32590063 0 2 311,131, 0,611, +,+, 23477 LTR ERVL 833 chr1 32602283 32603306 GGERV10_LTR 987 - 32602283 32603306 0 2 220,803, 0,220, -,-, 23484 LTR ERVL 833 chr1 32603422 32610553 RSV-int 777 + 32603422 32610553 0 2 155,6976, 0,155, +,+, 23485 LTR ERVK 833 chr1 32610827 32615631 GGERV10_LTR 983 - 32610827 32615631 0 2 4583,220, 0,4584, -,-, 23487 LTR ERVL 834 chr1 32664563 32664967 TguLTR5e 458 - 32664563 32664967 0 2 54,263, 0,141, -,-, 23523 LTR ERVL 834 chr1 32682968 32684102 GGLTR5B 296 + 32682968 32684102 0 2 398,180, 0,954, +,+, 23536 LTR ERVL 834 chr1 32686747 32690433 CR1-Y2_Aves 167 + 32686747 32690433 0 2 368,178, 0,3508, +,+, 23540 LINE CR1 834 chr1 32740748 32740864 GGLTR5A 413 - 32740748 32740864 0 2 16,100, 0,16, -,-, 23579 LTR ERVL 835 chr1 32817026 32817553 CR1-Y1_Aves 242 + 32817026 32817553 0 2 477,50, 0,477, +,+, 23626 LINE CR1 835 chr1 32827393 32827845 CR1-E 96 + 32827393 32827845 0 2 105,37, 0,415, +,+, 23628 LINE CR1 835 chr1 32859486 32859862 Char12Mar1_GG 606 - 32859486 32859862 0 2 164,211, 0,165, -,-, 23647 DNA hAT-Charlie 836 chr1 32935986 32936685 CR1-Y2_Aves 346 - 32935986 32936685 0 2 88,589, 0,110, -,-, 23686 LINE CR1 836 chr1 32939017 32940394 CR1-Y1_Aves 375 - 32939017 32940394 0 3 56,490,673, 0,96,704, -,-,-, 23688 LINE CR1 836 chr1 32950424 32951251 CR1-Y1_Aves 419 + 32950424 32951251 0 2 683,144, 0,683, +,+, 23701 LINE CR1 836 chr1 32970542 32970899 CR1-C4 611 - 32970542 32970899 0 2 165,192, 0,165, -,-, 23712 LINE CR1 836 chr1 32992034 32992948 CR1-Y2_Aves 198 - 32992034 32992948 0 2 189,666, 0,248, -,-, 23720 LINE CR1 837 chr1 33153849 33155133 GGLTR8A 545 - 33153849 33155133 0 2 725,326, 0,958, -,-, 23790 LTR ERVL 839 chr1 33326987 33328219 CR1-D2 666 - 33326987 33328219 0 2 972,260, 0,972, -,-, 23883 LINE CR1 839 chr1 33333394 33333927 GGLTR5B 582 + 33333394 33333927 0 2 350,145, 0,388, +,+, 23885 LTR ERVL 839 chr1 33345975 33346255 GGLTR3G1 740 - 33345975 33346255 0 2 75,205, 0,75, -,-, 23893 LTR ERVL 839 chr1 33380555 33381481 CR1-L3A_Croc 169 + 33380555 33381481 0 2 205,437, 0,489, +,+, 23911 LINE CR1 839 chr1 33395495 33395554 (CCCCCGC)n 354 + 33395495 33395554 0 2 8,23, 0,36, +,+, 23925 Simple_repeat Simple_repeat 839 chr1 33408256 33408774 CR1-C3 563 + 33408256 33408774 0 3 141,54,279, 0,141,239, +,+,+, 23935 LINE CR1 840 chr1 33469081 33469437 CR1-X2 486 - 33469081 33469437 0 2 260,96, 0,260, -,-, 23965 LINE CR1 841 chr1 33615747 33615858 (ATATATA)n 504 + 33615747 33615858 0 2 11,22, 0,89, +,+, 24024 Simple_repeat Simple_repeat 841 chr1 33625864 33626725 Mariner1b_GG 615 - 33625864 33626725 0 2 262,307, 0,554, -,-, 24030 DNA TcMar-Mariner 841 chr1 33670627 33671018 CR1-C4 605 - 33670627 33671018 0 2 239,146, 0,245, -,-, 24054 LINE CR1 842 chr1 33762258 33762901 CR1-F 915 - 33762258 33762901 0 2 417,226, 0,417, -,-, 24093 LINE CR1 843 chr1 33837130 33838233 CR1-C3 663 - 33837130 33838233 0 2 334,769, 0,334, -,-, 24134 LINE CR1 843 chr1 33924424 33925149 Mariner1_GG 459 - 33924424 33925149 0 3 137,205,176, 0,137,549, -,-,-, 24183 DNA TcMar-Mariner 844 chr1 34041669 34042314 CR1-F2 557 - 34041669 34042314 0 2 128,511, 0,134, -,-, 24227 LINE CR1 844 chr1 34062234 34062509 CR1-C4 698 + 34062234 34062509 0 2 240,35, 0,240, +,+, 24242 LINE CR1 845 chr1 34203242 34203362 (T)n 792 + 34203242 34203362 0 2 25,53, 0,67, +,+, 24312 Simple_repeat Simple_repeat 848 chr1 34485523 34485970 REP131 351 - 34485523 34485970 0 2 139,95, 0,352, -,-, 24454 DNA? DNA? 848 chr1 34512297 34512799 CR1-F2 398 - 34512297 34512799 0 2 216,271, 0,231, -,-, 24466 LINE CR1 849 chr1 34616483 34617737 CR1-Y2_Aves 389 - 34616483 34617737 0 4 368,274,128,468, 0,377,654,786, -,-,-,-, 24512 LINE CR1 849 chr1 34647706 34648127 CR1-B2 697 + 34647706 34648127 0 2 102,319, 0,102, +,+, 24531 LINE CR1 849 chr1 34656683 34657102 CR1-Y2_Aves 265 + 34656683 34657102 0 2 144,218, 0,201, +,+, 24541 LINE CR1 850 chr1 34774083 34774758 GGERVL-B-int 392 + 34774083 34774758 0 2 155,327, 0,348, +,+, 24619 LTR ERVL 850 chr1 34775335 34776439 CR1-Y3 760 - 34775335 34776439 0 2 674,430, 0,674, -,-, 24623 LINE CR1 852 chr1 35011064 35012079 CR1-L3B_Croc 328 + 35011064 35012079 0 3 94,149,72, 0,260,943, +,+,+, 24726 LINE CR1 852 chr1 35028352 35029230 CR1-Y4 649 + 35028352 35029230 0 2 176,700, 0,178, +,+, 24738 LINE CR1 853 chr1 35145541 35146111 CR1-F2 695 + 35145541 35146111 0 2 108,310, 0,260, +,+, 24802 LINE CR1 853 chr1 35254384 35254701 CR1-C4 526 + 35254384 35254701 0 2 72,245, 0,72, +,+, 24853 LINE CR1 854 chr1 35338137 35344239 CR1-D2 496 + 35338137 35344239 0 2 274,114, 0,5988, +,+, 24880 LINE CR1 854 chr1 35356195 35357308 REP131 212 - 35356195 35357308 0 2 272,136, 0,977, -,-, 24886 DNA? DNA? 856 chr1 35595137 35595555 GGLTR8B 424 - 35595137 35595555 0 2 303,109, 0,309, -,-, 25007 LTR ERVL 858 chr1 35851748 35852737 CR1-F2 298 - 35851748 35852737 0 2 251,693, 0,296, -,-, 25111 LINE CR1 858 chr1 35882301 35885802 CR1-Y1_Aves 437 + 35882301 35885802 0 3 1079,1397,122, 0,1982,3379, +,+,+, 25120 LINE CR1 859 chr1 35973628 35974013 CR1-X2 586 + 35973628 35974013 0 2 88,233, 0,152, +,+, 25146 LINE CR1 862 chr1 36410821 36411407 GGLTR5B 501 + 36410821 36411407 0 2 324,175, 0,411, +,+, 25371 LTR ERVL 107 chr1 36437941 36440137 CR1-L3B_Croc 111 - 36437941 36440137 0 2 226,344, 0,1852, -,-, 25383 LINE CR1 863 chr1 36487672 36488061 CR1-X2 552 + 36487672 36488061 0 2 284,79, 0,310, +,+, 25404 LINE CR1 864 chr1 36610872 36611618 CR1-Y2_Aves 171 - 36610872 36611618 0 2 309,437, 0,309, -,-, 25460 LINE CR1 864 chr1 36611181 36615141 CR1-Y1_Aves 78 - 36611181 36615141 0 2 65,298, 0,3662, -,-, 25461 LINE CR1 864 chr1 36625602 36625868 GGLTR8A 555 - 36625602 36625868 0 2 186,79, 0,187, -,-, 25469 LTR ERVL 865 chr1 36708728 36710556 CR1-X1 581 - 36708728 36710556 0 3 367,404,245, 0,367,1583, -,-,-, 25528 LINE CR1 865 chr1 36714680 36715178 CR1-Y1_Aves 483 + 36714680 36715178 0 2 411,53, 0,445, +,+, 25531 LINE CR1 865 chr1 36759043 36759128 (CTTTT)n 274 + 36759043 36759128 0 2 18,12, 0,73, +,+, 25550 Simple_repeat Simple_repeat 865 chr1 36784019 36787815 CR1-Y 400 - 36784019 36787815 0 2 2657,785, 0,3011, -,-, 25563 LINE CR1 865 chr1 36786676 36787035 CR1-F2 667 - 36786676 36787035 0 2 161,198, 0,161, -,-, 25564 LINE CR1 866 chr1 36877171 36879341 CR1-C3 623 + 36877171 36879341 0 2 1021,379, 0,1791, +,+, 25613 LINE CR1 866 chr1 36885484 36886029 GGLTR8B 380 + 36885484 36886029 0 2 308,228, 0,317, +,+, 25617 LTR ERVL 866 chr1 36912044 36914175 CR1-C4 559 + 36912044 36914175 0 2 849,761, 0,1370, +,+, 25638 LINE CR1 867 chr1 37007624 37007664 (ATATAC)n 422 + 37007624 37007664 0 2 10,9, 0,31, +,+, 25704 Simple_repeat Simple_repeat 867 chr1 37019940 37020814 CR1-Y2_Aves 443 - 37019940 37020814 0 3 132,159,67, 0,648,807, -,-,-, 25713 LINE CR1 867 chr1 37028660 37029046 CR1-Y2_Aves 192 - 37028660 37029046 0 2 210,170, 0,216, -,-, 25719 LINE CR1 867 chr1 37036978 37037612 CR1-X2 376 - 37036978 37037612 0 2 448,186, 0,448, -,-, 25726 LINE CR1 867 chr1 37051302 37051720 GGLTR5B 276 + 37051302 37051720 0 2 165,221, 0,197, +,+, 25739 LTR ERVL 867 chr1 37060791 37061875 Char12Mar1_GG 634 - 37060791 37061875 0 3 99,527,143, 0,380,941, -,-,-, 25746 DNA hAT-Charlie 867 chr1 37076786 37080306 CR1-F2 571 - 37076786 37080306 0 3 292,753,329, 0,627,3191, -,-,-, 25758 LINE CR1 868 chr1 37113532 37113816 GGLTR3E3 341 - 37113532 37113816 0 2 86,197, 0,87, -,-, 25786 LTR ERVL 868 chr1 37160525 37160775 CR1-Y3 400 + 37160525 37160775 0 2 35,67, 0,183, +,+, 25816 LINE CR1 868 chr1 37219504 37220223 CR1-D2 536 - 37219504 37220223 0 3 176,423,120, 0,176,599, -,-,-, 25865 LINE CR1 869 chr1 37243351 37243962 CR1-C2 830 + 37243351 37243962 0 2 406,205, 0,406, +,+, 25885 LINE CR1 869 chr1 37287504 37291089 GGLTR3E1 791 + 37287504 37291089 0 3 3184,168,111, 0,3184,3474, +,+,+, 25914 LTR ERVL 869 chr1 37291496 37292016 GGLTR11 608 + 37291496 37292016 0 2 59,409, 0,111, +,+, 25915 LTR ERV1 869 chr1 37321076 37321668 UCON28a 276 + 37321076 37321668 0 2 201,313, 0,279, +,+, 25935 Unknown Unknown 870 chr1 37369956 37370201 Char12Mar1_GG 694 - 37369956 37370201 0 2 111,134, 0,111, -,-, 25979 DNA hAT-Charlie 870 chr1 37384277 37384901 CR1-F2 416 + 37384277 37384901 0 2 274,222, 0,402, +,+, 25989 LINE CR1 870 chr1 37391046 37391979 CR1-X2 527 + 37391046 37391979 0 2 787,128, 0,805, +,+, 25997 LINE CR1 870 chr1 37467512 37467699 GGLTR8B 406 - 37467512 37467699 0 2 98,88, 0,99, -,-, 26049 LTR ERVL 871 chr1 37512199 37512272 (T)n 947 + 37512199 37512272 0 2 20,36, 0,37, +,+, 26083 Simple_repeat Simple_repeat 871 chr1 37574519 37575220 CR1-X2 582 + 37574519 37575220 0 3 264,169,268, 0,264,433, +,+,+, 26120 LINE CR1 871 chr1 37607965 37608137 GGLTR8A 575 - 37607965 37608137 0 2 139,33, 0,139, -,-, 26133 LTR ERVL 872 chr1 37623640 37624506 CR1-X1 636 + 37623640 37624506 0 2 278,583, 0,283, +,+, 26138 LINE CR1 872 chr1 37688287 37688964 CR1-F2 549 - 37688287 37688964 0 3 382,129,166, 0,382,511, -,-,-, 26175 LINE CR1 872 chr1 37711379 37715619 CR1-E 331 + 37711379 37715619 0 3 425,298,847, 0,430,3393, +,+,+, 26185 LINE CR1 872 chr1 37739439 37740529 CR1-F 938 + 37739439 37740529 0 2 178,911, 0,179, +,+, 26202 LINE CR1 873 chr1 37773490 37773906 CR1-X2 558 + 37773490 37773906 0 2 155,261, 0,155, +,+, 26223 LINE CR1 873 chr1 37825318 37826160 CR1-L3B_Croc 137 + 37825318 37826160 0 2 211,222, 0,620, +,+, 26258 LINE CR1 874 chr1 38002197 38002267 (AAC)n 386 + 38002197 38002267 0 2 9,26, 0,44, +,+, 26346 Simple_repeat Simple_repeat 109 chr1 38008841 38011680 CR1-C4 474 - 38008841 38011680 0 2 32,172, 0,2667, -,-, 26353 LINE CR1 875 chr1 38092912 38094010 CR1-Y1_Aves 412 - 38092912 38094010 0 2 480,84, 0,1014, -,-, 26394 LINE CR1 876 chr1 38163965 38164490 CR1-Y4 601 + 38163965 38164490 0 3 129,281,107, 0,137,418, +,+,+, 26426 LINE CR1 876 chr1 38266526 38267095 CR1-Y2_Aves 117 + 38266526 38267095 0 2 70,332, 0,237, +,+, 26468 LINE CR1 877 chr1 38311955 38313058 CR1-L3B_Croc 151 - 38311955 38313058 0 2 568,300, 0,803, -,-, 26488 LINE CR1 877 chr1 38319905 38320761 CR1-C4 617 + 38319905 38320761 0 2 153,703, 0,153, +,+, 26490 LINE CR1 877 chr1 38338396 38338977 GGLTR5B 138 - 38338396 38338977 0 2 147,403, 0,178, -,-, 26494 LTR ERVL 877 chr1 38402487 38403269 CR1-F2 411 + 38402487 38403269 0 2 406,376, 0,406, +,+, 26526 LINE CR1 878 chr1 38405796 38406543 CR1-Y4 512 + 38405796 38406543 0 2 512,235, 0,512, +,+, 26529 LINE CR1 878 chr1 38456603 38456752 CR1-F2 662 - 38456603 38456752 0 2 90,59, 0,90, -,-, 26544 LINE CR1 878 chr1 38506386 38507147 CR1-F2 533 + 38506386 38507147 0 2 452,309, 0,452, +,+, 26578 LINE CR1 879 chr1 38571248 38578866 REP131 314 - 38571248 38578866 0 2 89,368, 0,7250, -,-, 26615 DNA? DNA? 879 chr1 38596458 38597888 Char12Mar1_GG 731 - 38596458 38597888 0 2 105,461, 0,969, -,-, 26632 DNA hAT-Charlie 880 chr1 38785071 38785552 CR1-C4 615 - 38785071 38785552 0 2 118,355, 0,126, -,-, 26745 LINE CR1 882 chr1 38990381 38991107 CR1-Y1_Aves 201 - 38990381 38991107 0 2 131,141, 0,585, -,-, 26865 LINE CR1 882 chr1 39058946 39059264 GGERV10_LTR 720 - 39058946 39059264 0 2 160,60, 0,258, -,-, 26919 LTR ERVL 883 chr1 39080815 39080896 (TA)n 778 + 39080815 39080896 0 2 33,35, 0,46, +,+, 26936 Simple_repeat Simple_repeat 883 chr1 39085234 39085357 (T)n 917 + 39085234 39085357 0 2 26,40, 0,83, +,+, 26940 Simple_repeat Simple_repeat 883 chr1 39178454 39178957 TguLTR5e 231 + 39178454 39178957 0 2 259,214, 0,289, +,+, 26995 LTR ERVL 884 chr1 39201166 39202391 Mariner1b_GG 685 - 39201166 39202391 0 2 509,56, 0,1169, -,-, 27007 DNA TcMar-Mariner 884 chr1 39243104 39245757 CR1-F2 670 + 39243104 39245757 0 2 83,207, 0,2446, +,+, 27030 LINE CR1 884 chr1 39295386 39296910 CR1-Y2_Aves 483 - 39295386 39296910 0 2 67,164, 0,1360, -,-, 27068 LINE CR1 884 chr1 39315587 39316841 CR1-B2 842 + 39315587 39316841 0 2 336,288, 0,966, +,+, 27083 LINE CR1 885 chr1 39393934 39395125 CR1-L3B_Croc 245 - 39393934 39395125 0 2 361,324, 0,867, -,-, 27121 LINE CR1 886 chr1 39542206 39542668 CR1-Y2_Aves 243 + 39542206 39542668 0 2 335,127, 0,335, +,+, 27191 LINE CR1 888 chr1 39843465 39845647 CR1-D2 597 - 39843465 39845647 0 2 830,489, 0,1693, -,-, 27312 LINE CR1 889 chr1 39860696 39860780 (T)n 900 + 39860696 39860780 0 2 20,32, 0,52, +,+, 27321 Simple_repeat Simple_repeat 889 chr1 39864623 39865143 CR1-D2 678 - 39864623 39865143 0 2 272,183, 0,337, -,-, 27326 LINE CR1 890 chr1 40078362 40078721 CR1-C3 522 + 40078362 40078721 0 2 75,245, 0,114, +,+, 27442 LINE CR1 892 chr1 40318225 40318755 CR1-C4 512 + 40318225 40318755 0 2 43,348, 0,182, +,+, 27559 LINE CR1 892 chr1 40333025 40333241 GGLTR3E1 897 - 40333025 40333241 0 2 145,71, 0,145, -,-, 27568 LTR ERVL 893 chr1 40390311 40391526 CR1-C3 710 + 40390311 40391526 0 2 616,599, 0,616, +,+, 27604 LINE CR1 894 chr1 40501876 40502150 CR1-C2 516 + 40501876 40502150 0 2 88,186, 0,88, +,+, 27672 LINE CR1 894 chr1 40531832 40532733 CR1-C4 527 + 40531832 40532733 0 2 485,398, 0,503, +,+, 27691 LINE CR1 894 chr1 40554317 40554608 REP131 106 - 40554317 40554608 0 2 240,24, 0,267, -,-, 27709 DNA? DNA? 894 chr1 40624078 40625566 CR1-C4 238 + 40624078 40625566 0 2 929,137, 0,1351, +,+, 27766 LINE CR1 895 chr1 40648274 40649143 GGLTR5A 582 + 40648274 40649143 0 2 88,219, 0,650, +,+, 27782 LTR ERVL 895 chr1 40712290 40713113 CR1-X2 450 + 40712290 40713113 0 2 138,685, 0,138, +,+, 27824 LINE CR1 895 chr1 40746608 40746668 (TTGTT)n 516 + 40746608 40746668 0 2 11,20, 0,40, +,+, 27845 Simple_repeat Simple_repeat 895 chr1 40750431 40750482 GA-rich 516 + 40750431 40750482 0 2 11,12, 0,39, +,+, 27848 Low_complexity Low_complexity 896 chr1 40766019 40769190 CR1-Y4 555 + 40766019 40769190 0 2 1016,705, 0,2466, +,+, 27857 LINE CR1 896 chr1 40829332 40829494 G-rich 449 + 40829332 40829494 0 2 76,38, 0,124, +,+, 27883 Low_complexity Low_complexity 897 chr1 40912425 40913045 CR1-D2 676 - 40912425 40913045 0 2 259,361, 0,259, -,-, 27918 LINE CR1 897 chr1 40942832 40942887 (TTTTGA)n 410 + 40942832 40942887 0 2 26,9, 0,46, +,+, 27940 Simple_repeat Simple_repeat 898 chr1 41070189 41071069 CR1-E 527 - 41070189 41071069 0 2 183,341, 0,539, -,-, 28025 LINE CR1 898 chr1 41137822 41139348 CR1-H 760 + 41137822 41139348 0 2 52,424, 0,1102, +,+, 28071 LINE CR1 899 chr1 41164465 41165954 CR1-F 384 - 41164465 41165954 0 2 264,1223, 0,266, -,-, 28090 LINE CR1 899 chr1 41227958 41228760 CR1-Y2_Aves 137 + 41227958 41228760 0 2 443,230, 0,572, +,+, 28159 LINE CR1 899 chr1 41254274 41255109 CR1-Y4 438 - 41254274 41255109 0 2 336,220, 0,615, -,-, 28189 LINE CR1 899 chr1 41286037 41286508 CR1-Y4 252 + 41286037 41286508 0 2 315,155, 0,316, +,+, 28205 LINE CR1 900 chr1 41288207 41289474 CR1-C4 468 - 41288207 41289474 0 2 141,1097, 0,170, -,-, 28209 LINE CR1 900 chr1 41344897 41345443 CR1-F 157 + 41344897 41345443 0 2 136,382, 0,164, +,+, 28254 LINE CR1 900 chr1 41370415 41370911 GGLTR5B 509 + 41370415 41370911 0 2 103,325, 0,171, +,+, 28282 LTR ERVL 900 chr1 41381954 41381998 (AACA)n 386 + 41381954 41381998 0 2 11,6, 0,38, +,+, 28295 Simple_repeat Simple_repeat 900 chr1 41395103 41395177 (TCTCTT)n 468 + 41395103 41395177 0 2 14,6, 0,68, +,+, 28305 Simple_repeat Simple_repeat 900 chr1 41401443 41402447 CR1-X2 487 + 41401443 41402447 0 3 80,129,735, 0,123,269, +,+,+, 28319 LINE CR1 901 chr1 41439470 41441397 CR1-Y 551 + 41439470 41441397 0 2 296,1631, 0,296, +,+, 28356 LINE CR1 901 chr1 41448722 41451260 CR1-X2 455 + 41448722 41451260 0 3 321,792,436, 0,534,2102, +,+,+, 28367 LINE CR1 901 chr1 41477109 41478006 CR1-C4 415 + 41477109 41478006 0 3 513,210,157, 0,530,740, +,+,+, 28403 LINE CR1 901 chr1 41501556 41502781 CR1-X 546 + 41501556 41502781 0 2 757,468, 0,757, +,+, 28437 LINE CR1 901 chr1 41511224 41512295 CR1-X2 491 - 41511224 41512295 0 2 711,360, 0,711, -,-, 28445 LINE CR1 901 chr1 41512323 41512666 CR1-C4 600 + 41512323 41512666 0 2 279,64, 0,279, +,+, 28446 LINE CR1 901 chr1 41535559 41536042 CR1-Y4 531 - 41535559 41536042 0 2 158,311, 0,172, -,-, 28471 LINE CR1 902 chr1 41557856 41558140 Char12Mar1_GG 697 - 41557856 41558140 0 2 115,168, 0,116, -,-, 28492 DNA hAT-Charlie 902 chr1 41624543 41624683 A-rich 246 + 41624543 41624683 0 2 12,11, 0,129, +,+, 28564 Low_complexity Low_complexity 902 chr1 41661167 41661288 (TA)n 726 + 41661167 41661288 0 2 29,49, 0,72, +,+, 28592 Simple_repeat Simple_repeat 903 chr1 41768927 41771196 CR1-Y2_Aves 255 + 41768927 41771196 0 2 470,228, 0,2041, +,+, 28680 LINE CR1 906 chr1 42082433 42082537 GGLTR10C2 848 - 42082433 42082537 0 2 61,39, 0,65, -,-, 28950 LTR ERVK 906 chr1 42116184 42116239 (ATTT)n 338 + 42116184 42116239 0 2 10,24, 0,31, +,+, 28982 Simple_repeat Simple_repeat 906 chr1 42121718 42122321 CR1-C4 564 - 42121718 42122321 0 2 19,531, 0,72, -,-, 28986 LINE CR1 906 chr1 42191669 42192256 GGLTR8A 453 - 42191669 42192256 0 3 76,68,442, 0,77,145, -,-,-, 29051 LTR ERVL 907 chr1 42275580 42276353 CR1-H 775 + 42275580 42276353 0 2 421,351, 0,422, +,+, 29119 LINE CR1 907 chr1 42292470 42292773 CR1-D2 621 - 42292470 42292773 0 2 70,233, 0,70, -,-, 29137 LINE CR1 907 chr1 42295891 42295961 (T)n 945 + 42295891 42295961 0 2 19,32, 0,38, +,+, 29141 Simple_repeat Simple_repeat 907 chr1 42309097 42310296 CR1-Y4 464 - 42309097 42310296 0 2 729,470, 0,729, -,-, 29152 LINE CR1 908 chr1 42344299 42346340 CR1-C4 503 + 42344299 42346340 0 3 247,269,195, 0,1577,1846, +,+,+, 29185 LINE CR1 908 chr1 42353439 42356517 GGLTR3F2 874 + 42353439 42356517 0 2 2601,477, 0,2601, +,+, 29196 LTR ERVL 908 chr1 42368100 42369101 CR1-F2 844 - 42368100 42369101 0 2 715,286, 0,715, -,-, 29212 LINE CR1 908 chr1 42394764 42395601 CR1-Y4 511 + 42394764 42395601 0 2 772,64, 0,773, +,+, 29236 LINE CR1 908 chr1 42395740 42396316 CR1-Y2_Aves 109 - 42395740 42396316 0 2 19,545, 0,31, -,-, 29238 LINE CR1 908 chr1 42400676 42401096 CR1-X2 460 - 42400676 42401096 0 2 214,206, 0,214, -,-, 29243 LINE CR1 908 chr1 42444952 42448296 CR1-Y2_Aves 417 + 42444952 42448296 0 3 52,134,88, 0,2470,3256, +,+,+, 29290 LINE CR1 908 chr1 42445021 42445715 CR1-C2 429 - 42445021 42445715 0 3 113,172,347, 0,113,347, -,-,-, 29291 LINE CR1 908 chr1 42466180 42466361 GGLTR3C1 542 + 42466180 42466361 0 2 73,108, 0,73, +,+, 29313 LTR ERVL 909 chr1 42467405 42469908 CR1-C4 528 + 42467405 42469908 0 2 274,1127, 0,1376, +,+, 29317 LINE CR1 909 chr1 42505288 42506750 CR1-D2 568 + 42505288 42506750 0 3 215,205,442, 0,815,1020, +,+,+, 29347 LINE CR1 909 chr1 42557627 42558368 GGLTR12C 568 + 42557627 42558368 0 2 107,239, 0,502, +,+, 29390 LTR ERVL 909 chr1 42588664 42588949 CR1-E 566 - 42588664 42588949 0 2 63,222, 0,63, -,-, 29419 LINE CR1 909 chr1 42591651 42594031 CR1-X 423 - 42591651 42594031 0 4 1921,200,24,208, 0,1921,2121,2172, -,-,-,-, 29427 LINE CR1 910 chr1 42634859 42635740 CR1-Y2_Aves 420 - 42634859 42635740 0 2 96,187, 0,694, -,-, 29463 LINE CR1 910 chr1 42638741 42640971 CR1-X 547 + 42638741 42640971 0 3 610,339,40, 0,1474,2190, +,+,+, 29470 LINE CR1 910 chr1 42677622 42678030 CR1-Y2_Aves 166 + 42677622 42678030 0 2 16,365, 0,43, +,+, 29508 LINE CR1 910 chr1 42702489 42703388 GGLTR12C 575 - 42702489 42703388 0 2 244,655, 0,244, -,-, 29529 LTR ERVL 910 chr1 42720140 42720717 CR1-D2 573 - 42720140 42720717 0 3 66,248,163, 0,66,414, -,-,-, 29541 LINE CR1 911 chr1 42731223 42732407 CR1-Y2_Aves 144 + 42731223 42732407 0 2 220,740, 0,444, +,+, 29552 LINE CR1 911 chr1 42769062 42769859 GGLTR9 444 - 42769062 42769859 0 2 146,111, 0,686, -,-, 29589 LTR ERVL 911 chr1 42774322 42775156 CR1-F2 504 - 42774322 42775156 0 2 363,471, 0,363, -,-, 29595 LINE CR1 912 chr1 42914646 42916479 CR1-Y4 298 - 42914646 42916479 0 2 525,1226, 0,607, -,-, 29700 LINE CR1 912 chr1 42970822 42971945 CR1-C4 506 - 42970822 42971945 0 2 479,644, 0,479, -,-, 29747 LINE CR1 912 chr1 42976236 42976542 CR1-Y1_Aves 486 - 42976236 42976542 0 2 228,78, 0,228, -,-, 29749 LINE CR1 913 chr1 43082753 43083802 CR1-G 792 - 43082753 43083802 0 2 809,240, 0,809, -,-, 29831 LINE CR1 913 chr1 43102799 43103542 CR1-C2 302 - 43102799 43103542 0 2 41,649, 0,94, -,-, 29845 LINE CR1 915 chr1 43356232 43357452 CR1-H 863 - 43356232 43357452 0 2 860,353, 0,867, -,-, 30012 LINE CR1 915 chr1 43363626 43363853 (TA)n 631 + 43363626 43363853 0 2 100,116, 0,111, +,+, 30014 Simple_repeat Simple_repeat 915 chr1 43381843 43382459 CR1-Y2_Aves 182 + 43381843 43382459 0 2 334,189, 0,427, +,+, 30027 LINE CR1 916 chr1 43467819 43469072 CR1-E 646 - 43467819 43469072 0 3 245,499,508, 0,246,745, -,-,-, 30079 LINE CR1 916 chr1 43476506 43476965 CR1-D2 727 + 43476506 43476965 0 2 371,88, 0,371, +,+, 30083 LINE CR1 917 chr1 43532841 43533644 CR1-E 757 - 43532841 43533644 0 2 282,518, 0,285, -,-, 30112 LINE CR1 917 chr1 43610025 43610071 (TTCTT)n 674 + 43610025 43610071 0 2 6,6, 0,40, +,+, 30175 Simple_repeat Simple_repeat 918 chr1 43663270 43666356 CR1-H 834 - 43663270 43666356 0 2 991,2092, 0,994, -,-, 30215 LINE CR1 918 chr1 43761107 43761944 CR1-B2 788 + 43761107 43761944 0 2 349,159, 0,678, +,+, 30292 LINE CR1 918 chr1 43774145 43775491 GGLTR5A 423 + 43774145 43775491 0 3 81,66,137, 0,1097,1209, +,+,+, 30300 LTR ERVL 919 chr1 43810181 43810302 (T)n 769 + 43810181 43810302 0 2 40,20, 0,101, +,+, 30337 Simple_repeat Simple_repeat 919 chr1 43841910 43841969 (ACAA)n 556 + 43841910 43841969 0 2 6,18, 0,41, +,+, 30367 Simple_repeat Simple_repeat 919 chr1 43863737 43863912 CR1-H2 58 - 43863737 43863912 0 2 55,87, 0,88, -,-, 30392 LINE CR1 919 chr1 43872258 43872882 Char12Mar1_GG 612 - 43872258 43872882 0 2 172,363, 0,261, -,-, 30402 DNA hAT-Charlie 919 chr1 43874203 43874403 CR1-D2 669 + 43874203 43874403 0 2 118,82, 0,118, +,+, 30404 LINE CR1 114 chr1 43908782 43909449 GGLTR5B 567 + 43908782 43909449 0 2 372,156, 0,511, +,+, 30424 LTR ERVL 920 chr1 43989565 43990906 Char12Mar1_GG 634 - 43989565 43990906 0 2 41,40, 0,1301, -,-, 30489 DNA hAT-Charlie 920 chr1 44008533 44008817 CR1-L3B_Croc 446 - 44008533 44008817 0 2 83,155, 0,129, -,-, 30506 LINE CR1 921 chr1 44131370 44133793 CR1-C2 839 - 44131370 44133793 0 2 194,432, 0,1991, -,-, 30605 LINE CR1 921 chr1 44154939 44155287 Char12Mar1_GG 573 - 44154939 44155287 0 2 123,220, 0,128, -,-, 30621 DNA hAT-Charlie 922 chr1 44272444 44272535 (CTTT)n 236 + 44272444 44272535 0 2 26,9, 0,82, +,+, 30697 Simple_repeat Simple_repeat 923 chr1 44430330 44431229 Mariner1_GG 685 - 44430330 44431229 0 2 269,630, 0,269, -,-, 30803 DNA TcMar-Mariner 924 chr1 44562718 44563298 CR1-C 859 - 44562718 44563298 0 2 90,490, 0,90, -,-, 30876 LINE CR1 926 chr1 44695965 44697446 CR1-H 880 + 44695965 44697446 0 2 223,76, 0,1405, +,+, 30917 LINE CR1 926 chr1 44761394 44761455 (CAAAA)n 716 + 44761394 44761455 0 2 11,18, 0,43, +,+, 30943 Simple_repeat Simple_repeat 926 chr1 44795703 44796570 CR1-Y2_Aves 354 + 44795703 44796570 0 2 723,127, 0,740, +,+, 30961 LINE CR1 926 chr1 44816781 44816933 G-rich 510 + 44816781 44816933 0 2 59,35, 0,117, +,+, 30979 Low_complexity Low_complexity 927 chr1 44872572 44873132 CR1-Y2_Aves 150 - 44872572 44873132 0 2 254,221, 0,339, -,-, 31004 LINE CR1 927 chr1 44922300 44923486 Mariner1_GG 644 - 44922300 44923486 0 2 607,579, 0,607, -,-, 31036 DNA TcMar-Mariner 927 chr1 44945571 44945791 CR1-Y2_Aves 543 - 44945571 44945791 0 2 121,69, 0,151, -,-, 31044 LINE CR1 928 chr1 45009709 45011829 CR1-X2 549 + 45009709 45011829 0 3 862,619,413, 0,1065,1707, +,+,+, 31075 LINE CR1 928 chr1 45017357 45019221 CR1-Y2_Aves 197 - 45017357 45019221 0 2 790,95, 0,1769, -,-, 31078 LINE CR1 928 chr1 45026199 45026236 (CTTTT)n 566 + 45026199 45026236 0 2 13,6, 0,31, +,+, 31083 Simple_repeat Simple_repeat 928 chr1 45070242 45070583 CR1-Y2_Aves 285 - 45070242 45070583 0 2 85,162, 0,179, -,-, 31118 LINE CR1 929 chr1 45101070 45102102 CR1-8_Crp 198 + 45101070 45102102 0 4 163,27,87,127, 0,540,620,905, +,+,+,+, 31130 LINE CR1 929 chr1 45148237 45149481 CR1-Y2_Aves 94 + 45148237 45149481 0 2 364,680, 0,564, +,+, 31153 LINE CR1 930 chr1 45299605 45300989 CR1-L3B_Croc 263 + 45299605 45300989 0 2 175,214, 0,1170, +,+, 31207 LINE CR1 931 chr1 45362328 45362643 CR1-X2 514 + 45362328 45362643 0 2 12,228, 0,87, +,+, 31243 LINE CR1 931 chr1 45399206 45399316 (AAAC)n 967 + 45399206 45399316 0 2 23,31, 0,79, +,+, 31261 Simple_repeat Simple_repeat 931 chr1 45439005 45439103 (CGCC)n 318 + 45439005 45439103 0 2 21,23, 0,75, +,+, 31278 Simple_repeat Simple_repeat 931 chr1 45451169 45451801 CR1-F2 359 - 45451169 45451801 0 2 247,385, 0,247, -,-, 31287 LINE CR1 932 chr1 45550333 45551089 GGLTR8B 310 + 45550333 45551089 0 2 67,634, 0,122, +,+, 31329 LTR ERVL 932 chr1 45580270 45581058 CR1-E 682 - 45580270 45581058 0 2 184,603, 0,185, -,-, 31342 LINE CR1 933 chr1 45693803 45694889 CR1-X2 612 - 45693803 45694889 0 2 97,986, 0,100, -,-, 31392 LINE CR1 933 chr1 45702558 45703644 CR1-X2 612 - 45702558 45703644 0 2 97,986, 0,100, -,-, 31397 LINE CR1 934 chr1 45832818 45833396 CR1-X1 490 + 45832818 45833396 0 3 192,167,215, 0,196,363, +,+,+, 31469 LINE CR1 935 chr1 45881097 45881628 CR1-L3A_Croc 164 - 45881097 45881628 0 2 150,201, 0,330, -,-, 31488 LINE CR1 935 chr1 45929052 45930002 CR1-C4 689 + 45929052 45930002 0 2 443,491, 0,459, +,+, 31503 LINE CR1 936 chr1 46028781 46029548 CR1-D2 695 + 46028781 46029548 0 2 50,716, 0,51, +,+, 31556 LINE CR1 936 chr1 46039645 46040121 GGLTR6 492 - 46039645 46040121 0 2 179,297, 0,179, -,-, 31565 LTR ERVL 936 chr1 46083186 46083960 CR1-Y2_Aves 341 + 46083186 46083960 0 2 546,216, 0,558, +,+, 31597 LINE CR1 936 chr1 46085687 46086484 CR1-Y1_Aves 552 - 46085687 46086484 0 2 318,239, 0,558, -,-, 31599 LINE CR1 938 chr1 46345933 46349277 CR1-C2 509 + 46345933 46349277 0 3 14,119,713, 0,2397,2631, +,+,+, 31746 LINE CR1 938 chr1 46349866 46350832 CR1-F2 458 + 46349866 46350832 0 2 93,96, 0,870, +,+, 31749 LINE CR1 940 chr1 46544728 46545120 GGLTR8B 605 - 46544728 46545120 0 2 77,315, 0,77, -,-, 31866 LTR ERVL 940 chr1 46545317 46546134 CR1-Y 831 + 46545317 46546134 0 2 645,158, 0,659, +,+, 31867 LINE CR1 940 chr1 46569137 46569912 CR1-Y1_Aves 240 - 46569137 46569912 0 2 145,625, 0,150, -,-, 31885 LINE CR1 940 chr1 46650021 46650130 (ATT)n 264 + 46650021 46650130 0 2 18,43, 0,66, +,+, 31923 Simple_repeat Simple_repeat 941 chr1 46707073 46707363 CR1-X2 596 + 46707073 46707363 0 2 164,122, 0,168, +,+, 31946 LINE CR1 942 chr1 46886164 46887735 Mariner1_GG 474 - 46886164 46887735 0 2 116,1161, 0,410, -,-, 32044 DNA TcMar-Mariner 943 chr1 46936480 46940064 REP131 188 - 46936480 46940064 0 2 308,105, 0,3479, -,-, 32065 DNA? DNA? 943 chr1 46975079 46975663 REP131 195 - 46975079 46975663 0 2 377,103, 0,481, -,-, 32096 DNA? DNA? 943 chr1 47017168 47017788 CR1-C4 542 - 47017168 47017788 0 2 127,493, 0,127, -,-, 32129 LINE CR1 945 chr1 47239503 47240863 CR1-H 854 + 47239503 47240863 0 2 469,45, 0,1315, +,+, 32248 LINE CR1 946 chr1 47341306 47343953 CR1-Y2_Aves 391 - 47341306 47343953 0 3 133,619,1367, 0,463,1280, -,-,-, 32299 LINE CR1 946 chr1 47341561 47341767 GGLTR5B 536 + 47341561 47341767 0 2 108,98, 0,108, +,+, 32300 LTR ERVL 946 chr1 47361076 47361205 A-rich 580 + 47361076 47361205 0 2 35,31, 0,98, +,+, 32310 Low_complexity Low_complexity 946 chr1 47446130 47446997 GGERVL-C-int 195 + 47446130 47446997 0 2 272,278, 0,589, +,+, 32356 LTR ERVL 947 chr1 47550903 47555279 ENS1-LTR 895 + 47550903 47555279 0 3 873,2630,873, 0,873,3503, +,+,+, 32404 LTR ERVL 948 chr1 47709023 47709666 GGLTR8B 584 + 47709023 47709666 0 2 128,515, 0,128, +,+, 32473 LTR ERVL 949 chr1 47747661 47748323 CR1-E 538 - 47747661 47748323 0 2 427,235, 0,427, -,-, 32487 LINE CR1 950 chr1 47894754 47895104 CR1-Y4 650 - 47894754 47895104 0 2 66,259, 0,91, -,-, 32549 LINE CR1 950 chr1 47945116 47945235 (GGC)n 378 + 47945116 47945235 0 2 61,21, 0,98, +,+, 32573 Simple_repeat Simple_repeat 951 chr1 48023841 48024218 CR1-F0 504 - 48023841 48024218 0 2 20,320, 0,57, -,-, 32618 LINE CR1 951 chr1 48052158 48054513 CR1-D2 680 + 48052158 48054513 0 2 167,165, 0,2190, +,+, 32635 LINE CR1 952 chr1 48156241 48157147 Char12Mar1_GG 569 - 48156241 48157147 0 3 90,107,158, 0,641,748, -,-,-, 32688 DNA hAT-Charlie 952 chr1 48222118 48224440 CR1-D2 612 + 48222118 48224440 0 2 221,629, 0,1693, +,+, 32730 LINE CR1 953 chr1 48332609 48332925 CR1-F2 530 - 48332609 48332925 0 2 149,167, 0,149, -,-, 32798 LINE CR1 956 chr1 48634108 48634168 (TTTC)n 610 + 48634108 48634168 0 2 6,20, 0,40, +,+, 33003 Simple_repeat Simple_repeat 956 chr1 48710474 48711290 CR1-X2 598 + 48710474 48711290 0 2 390,423, 0,393, +,+, 33048 LINE CR1 956 chr1 48711662 48711716 (AAGAACA)n 410 + 48711662 48711716 0 2 7,6, 0,48, +,+, 33049 Simple_repeat Simple_repeat 956 chr1 48748138 48750510 GGERV20_I-int 520 + 48748138 48750510 0 3 303,753,1306, 0,313,1066, +,+,+, 33068 LTR ERVL 956 chr1 48755857 48756182 GGERV10_LTR 659 + 48755857 48756182 0 2 82,159, 0,166, +,+, 33076 LTR ERVL 957 chr1 48761066 48761752 GGLTR5B 190 + 48761066 48761752 0 3 30,36,184, 0,236,502, +,+,+, 33086 LTR ERVL 957 chr1 48766555 48767762 CR1-Y 426 - 48766555 48767762 0 2 183,137, 0,1070, -,-, 33095 LINE CR1 957 chr1 48767905 48769195 CR1-Y2_Aves 174 + 48767905 48769195 0 2 474,279, 0,1011, +,+, 33097 LINE CR1 957 chr1 48807471 48809150 CR1-X 501 - 48807471 48809150 0 2 11,1402, 0,277, -,-, 33136 LINE CR1 957 chr1 48829455 48830998 CR1-F 564 - 48829455 48830998 0 2 1191,352, 0,1191, -,-, 33149 LINE CR1 957 chr1 48879286 48882378 CR1-Y2_Aves 220 - 48879286 48882378 0 2 387,270, 0,2822, -,-, 33183 LINE CR1 958 chr1 48902310 48902908 GGERVL-A-int 254 - 48902310 48902908 0 2 153,166, 0,432, -,-, 33200 LTR ERVL 958 chr1 48914939 48917660 CR1-Y4 475 - 48914939 48917660 0 3 1057,181,464, 0,1350,2257, -,-,-, 33208 LINE CR1 958 chr1 48960044 48961423 CR1-Y1_Aves 385 - 48960044 48961423 0 3 130,467,295, 0,617,1084, -,-,-, 33231 LINE CR1 959 chr1 49024478 49025792 Char12Mar1_GG 656 - 49024478 49025792 0 2 137,414, 0,900, -,-, 33267 DNA hAT-Charlie 959 chr1 49143653 49144428 CR1-D2 324 - 49143653 49144428 0 2 81,577, 0,198, -,-, 33342 LINE CR1 960 chr1 49183755 49184184 CR1-Y1_Aves 500 - 49183755 49184184 0 2 160,188, 0,241, -,-, 33363 LINE CR1 960 chr1 49187700 49188413 GGLTR12C 534 + 49187700 49188413 0 2 104,240, 0,473, +,+, 33368 LTR ERVL 960 chr1 49238654 49242791 GGLTR5B 167 - 49238654 49242791 0 2 220,287, 0,3850, -,-, 33388 LTR ERVL 960 chr1 49239133 49240450 GGERVL-C-int 379 - 49239133 49240450 0 2 335,982, 0,335, -,-, 33389 LTR ERVL 960 chr1 49240453 49241779 GGERVL-A-int 126 - 49240453 49241779 0 2 658,515, 0,811, -,-, 33390 LTR ERVL 962 chr1 49438946 49441114 CR1-Y2_Aves 237 - 49438946 49441114 0 2 259,329, 0,1839, -,-, 33528 LINE CR1 962 chr1 49520462 49520562 (CGGCG)n 456 + 49520462 49520562 0 2 47,8, 0,92, +,+, 33577 Simple_repeat Simple_repeat 965 chr1 49807752 49807792 (CCTGCT)n 588 + 49807752 49807792 0 2 7,10, 0,30, +,+, 33715 Simple_repeat Simple_repeat 965 chr1 49871815 49871916 (G)n 873 + 49871815 49871916 0 2 18,26, 0,75, +,+, 33759 Simple_repeat Simple_repeat 965 chr1 49882966 49884027 CR1-Y4 608 - 49882966 49884027 0 2 417,182, 0,879, -,-, 33772 LINE CR1 965 chr1 49887073 49888826 CR1-D2 546 - 49887073 49888826 0 2 11,1002, 0,751, -,-, 33776 LINE CR1 966 chr1 49949943 49950709 GGLTR8B 190 + 49949943 49950709 0 2 529,209, 0,557, +,+, 33806 LTR ERVL 966 chr1 49986703 49986949 CR1-C4 733 + 49986703 49986949 0 2 48,198, 0,48, +,+, 33824 LINE CR1 966 chr1 50038521 50038913 CR1-Y1_Aves 396 - 50038521 50038913 0 2 150,242, 0,150, -,-, 33852 LINE CR1 968 chr1 50229074 50229977 Mariner1_GG 532 - 50229074 50229977 0 2 430,472, 0,431, -,-, 33948 DNA TcMar-Mariner 968 chr1 50329920 50330850 CR1-D2 772 + 50329920 50330850 0 2 81,250, 0,680, +,+, 33997 LINE CR1 969 chr1 50400723 50401200 CR1-D2 598 - 50400723 50401200 0 2 205,238, 0,239, -,-, 34044 LINE CR1 969 chr1 50433734 50434682 CR1-D2 495 + 50433734 50434682 0 2 73,85, 0,863, +,+, 34070 LINE CR1 970 chr1 50520916 50523811 CR1-L3A_Croc 148 + 50520916 50523811 0 3 424,326,1033, 0,1452,1862, +,+,+, 34135 LINE CR1 970 chr1 50564763 50565022 CR1-D2 633 + 50564763 50565022 0 2 77,69, 0,190, +,+, 34170 LINE CR1 971 chr1 50705186 50706380 CR1-C 902 - 50705186 50706380 0 2 528,666, 0,528, -,-, 34283 LINE CR1 973 chr1 50883124 50884310 CR1-F2 573 - 50883124 50884310 0 2 250,201, 0,985, -,-, 34413 LINE CR1 973 chr1 50912129 50912229 G-rich 576 + 50912129 50912229 0 2 31,45, 0,55, +,+, 34432 Low_complexity Low_complexity 973 chr1 50934355 50937596 CR1-D2 583 - 50934355 50937596 0 2 73,121, 0,3120, -,-, 34445 LINE CR1 975 chr1 51214230 51214956 CR1-Y2 544 + 51214230 51214956 0 2 564,162, 0,564, +,+, 34614 LINE CR1 975 chr1 51219420 51219535 (CCG)n 418 + 51219420 51219535 0 2 23,10, 0,105, +,+, 34619 Simple_repeat Simple_repeat 977 chr1 51399321 51400393 CR1-X 299 - 51399321 51400393 0 3 267,199,405, 0,280,667, -,-,-, 34747 LINE CR1 977 chr1 51470275 51470689 CR1-Y4 691 - 51470275 51470689 0 2 92,322, 0,92, -,-, 34790 LINE CR1 978 chr1 51566351 51566723 Char12Mar1_GG 629 - 51566351 51566723 0 2 119,220, 0,152, -,-, 34854 DNA hAT-Charlie 978 chr1 51590869 51593129 CR1-C3 545 - 51590869 51593129 0 2 1773,274, 0,1986, -,-, 34873 LINE CR1 978 chr1 51593111 51594055 CR1-C4 420 - 51593111 51594055 0 2 470,474, 0,470, -,-, 34875 LINE CR1 979 chr1 51662398 51663002 CR1-Y4 538 - 51662398 51663002 0 2 403,126, 0,478, -,-, 34920 LINE CR1 980 chr1 51874652 51877295 CR1-D2 447 - 51874652 51877295 0 2 137,221, 0,2422, -,-, 35022 LINE CR1 981 chr1 51932549 51933499 CR1-L3A_Croc 316 - 51932549 51933499 0 2 257,557, 0,393, -,-, 35056 LINE CR1 981 chr1 51956074 51956968 CR1-11_Crp 62 + 51956074 51956968 0 2 293,427, 0,467, +,+, 35070 LINE CR1 981 chr1 51961607 51962804 CR1-F2 442 + 51961607 51962804 0 2 253,172, 0,1025, +,+, 35073 LINE CR1 981 chr1 51999173 51999403 CR1-Y2_Aves 297 + 51999173 51999403 0 2 82,137, 0,93, +,+, 35094 LINE CR1 982 chr1 52050853 52052041 CR1-F2 494 - 52050853 52052041 0 2 136,424, 0,764, -,-, 35137 LINE CR1 982 chr1 52070481 52071256 CR1-F2 608 - 52070481 52071256 0 2 666,109, 0,666, -,-, 35151 LINE CR1 983 chr1 52225806 52228468 CR1-C4 380 - 52225806 52228468 0 2 29,255, 0,2407, -,-, 35245 LINE CR1 983 chr1 52293829 52295243 CR1-L3A_Croc 136 - 52293829 52295243 0 2 750,369, 0,1045, -,-, 35299 LINE CR1 984 chr1 52318749 52320831 CR1-C4 641 - 52318749 52320831 0 2 74,327, 0,1755, -,-, 35307 LINE CR1 984 chr1 52330382 52330687 CR1-C2 781 - 52330382 52330687 0 2 271,34, 0,271, -,-, 35315 LINE CR1 984 chr1 52361077 52361719 CR1-16_AMi 321 - 52361077 52361719 0 2 324,172, 0,470, -,-, 35343 LINE CR1 984 chr1 52392223 52393490 CR1-H 856 - 52392223 52393490 0 2 1236,31, 0,1236, -,-, 35362 LINE CR1 984 chr1 52403863 52403960 (T)n 878 + 52403863 52403960 0 2 21,27, 0,70, +,+, 35369 Simple_repeat Simple_repeat 984 chr1 52421569 52424568 CR1-Y2_Aves 171 + 52421569 52424568 0 3 159,342,1032, 0,673,1967, +,+,+, 35381 LINE CR1 985 chr1 52552521 52553129 CR1-Y4 542 - 52552521 52553129 0 2 226,373, 0,235, -,-, 35466 LINE CR1 985 chr1 52558381 52559031 CR1-D2 661 + 52558381 52559031 0 2 459,54, 0,596, +,+, 35471 LINE CR1 986 chr1 52618987 52619046 A-rich 536 + 52618987 52619046 0 2 12,18, 0,41, +,+, 35515 Low_complexity Low_complexity 987 chr1 52696669 52699214 CR1-F2 147 + 52696669 52699214 0 3 845,567,1035, 0,845,1510, +,+,+, 35571 LINE CR1 987 chr1 52795938 52797885 CR1-H 423 + 52795938 52797885 0 2 399,553, 0,1394, +,+, 35632 LINE CR1 987 chr1 52799968 52800311 CR1-Y2_Aves 436 - 52799968 52800311 0 3 157,84,99, 0,159,244, -,-,-, 35636 LINE CR1 988 chr1 52865263 52865498 CR1-F0 494 + 52865263 52865498 0 2 179,56, 0,179, +,+, 35683 LINE CR1 988 chr1 52902295 52902751 CR1-F2 594 - 52902295 52902751 0 2 383,73, 0,383, -,-, 35710 LINE CR1 988 chr1 52949475 52950947 CR1-L3A_Croc 301 + 52949475 52950947 0 2 98,319, 0,1153, +,+, 35734 LINE CR1 989 chr1 53028438 53029457 CR1-Y2_Aves 397 + 53028438 53029457 0 2 149,863, 0,156, +,+, 35784 LINE CR1 990 chr1 53122655 53122953 GGLTR3C1 551 - 53122655 53122953 0 2 94,204, 0,94, -,-, 35846 LTR ERVL 990 chr1 53124319 53124782 CR1-Y2_Aves 261 + 53124319 53124782 0 3 91,131,165, 0,167,298, +,+,+, 35848 LINE CR1 990 chr1 53200169 53200674 REP131 200 - 53200169 53200674 0 2 122,220, 0,285, -,-, 35882 DNA? DNA? 990 chr1 53211727 53213375 REP131 189 - 53211727 53213375 0 3 81,329,531, 0,219,1117, -,-,-, 35887 DNA? DNA? 990 chr1 53211809 53211856 (GTTTTT)n 508 + 53211809 53211856 0 2 7,17, 0,30, +,+, 35888 Simple_repeat Simple_repeat 123 chr1 53213960 53216407 CR1-C4 482 - 53213960 53216407 0 2 1439,1008, 0,1439, -,-, 35891 LINE CR1 991 chr1 53269089 53269561 CR1-13_AMi 321 + 53269089 53269561 0 2 138,64, 0,408, +,+, 35924 LINE CR1 991 chr1 53316986 53318693 CR1-Y2_Aves 140 - 53316986 53318693 0 2 1188,519, 0,1188, -,-, 35957 LINE CR1 992 chr1 53355569 53357914 CR1-F2 461 + 53355569 53357914 0 2 141,402, 0,1943, +,+, 35980 LINE CR1 992 chr1 53467730 53469145 CR1-11_Crp 187 - 53467730 53469145 0 2 152,855, 0,560, -,-, 36042 LINE CR1 993 chr1 53524944 53526279 CR1-H2 642 + 53524944 53526279 0 2 228,71, 0,1264, +,+, 36077 LINE CR1 995 chr1 53778049 53778414 CR1-Y2_Aves 443 - 53778049 53778414 0 2 245,70, 0,295, -,-, 36205 LINE CR1 996 chr1 53929756 53929993 CR1-C4 551 + 53929756 53929993 0 2 157,80, 0,157, +,+, 36268 LINE CR1 996 chr1 53969380 53971261 CR1-Y4 496 + 53969380 53971261 0 2 81,348, 0,1533, +,+, 36287 LINE CR1 996 chr1 53970362 53970599 CR1-C4 561 - 53970362 53970599 0 2 93,144, 0,93, -,-, 36289 LINE CR1 997 chr1 54081881 54082210 GGLTR5A 519 + 54081881 54082210 0 2 257,72, 0,257, +,+, 36342 LTR ERVL 997 chr1 54097223 54097336 MER133B 269 . 54097223 54097336 0 2 96,17, 0,96, +,-, 36351 DNA? DNA? 998 chr1 54144160 54145345 CR1-L3B_Croc 90 + 54144160 54145345 0 3 215,151,685, 0,320,500, +,+,+, 36367 LINE CR1 999 chr1 54286235 54286826 CR1-Y2_Aves 364 - 54286235 54286826 0 2 67,299, 0,292, -,-, 36444 LINE CR1 999 chr1 54335074 54335715 CR1-F2 538 + 54335074 54335715 0 2 226,415, 0,226, +,+, 36460 LINE CR1 999 chr1 54382457 54383414 CR1-F2 414 + 54382457 54383414 0 3 499,206,250, 0,501,707, +,+,+, 36483 LINE CR1 1000 chr1 54500467 54500638 CR1-C4 621 - 54500467 54500638 0 2 62,109, 0,62, -,-, 36536 LINE CR1 1001 chr1 54641012 54642901 CR1-Y2_Aves 353 - 54641012 54642901 0 2 310,816, 0,1073, -,-, 36616 LINE CR1 1002 chr1 54735492 54738453 CR1-Y4 387 + 54735492 54738453 0 2 538,185, 0,2776, +,+, 36674 LINE CR1 1002 chr1 54777033 54779254 CR1-C 809 + 54777033 54779254 0 3 374,51,1796, 0,374,425, +,+,+, 36693 LINE CR1 1002 chr1 54779536 54781609 CR1-F 935 - 54779536 54781609 0 2 1334,733, 0,1340, -,-, 36694 LINE CR1 1003 chr1 54872012 54875453 CR1-F2 554 + 54872012 54875453 0 2 657,64, 0,3377, +,+, 36738 LINE CR1 1004 chr1 54997686 54998378 CR1-E 635 + 54997686 54998378 0 2 601,91, 0,601, +,+, 36799 LINE CR1 1005 chr1 55054468 55055260 CR1-B2 765 - 55054468 55055260 0 2 309,433, 0,359, -,-, 36827 LINE CR1 1005 chr1 55086356 55088315 CR1-B 917 - 55086356 55088315 0 2 789,1170, 0,789, -,-, 36851 LINE CR1 1005 chr1 55114524 55114623 A-rich 626 + 55114524 55114623 0 2 29,33, 0,66, +,+, 36870 Low_complexity Low_complexity 1005 chr1 55121415 55122117 (CCTTTT)n 528 + 55121415 55122117 0 2 20,78, 0,624, +,+, 36885 Simple_repeat Simple_repeat 1006 chr1 55209517 55210365 CR1-Y2_Aves 257 - 55209517 55210365 0 3 114,331,139, 0,327,709, -,-,-, 36951 LINE CR1 1006 chr1 55269695 55270689 CR1-L3A_Croc 292 + 55269695 55270689 0 2 117,83, 0,911, +,+, 36995 LINE CR1 1006 chr1 55279138 55279910 CR1-F2 468 + 55279138 55279910 0 2 522,237, 0,535, +,+, 37004 LINE CR1 1007 chr1 55325649 55329754 Char12Mar1_GG 486 - 55325649 55329754 0 2 208,130, 0,3975, -,-, 37037 DNA hAT-Charlie 1007 chr1 55339096 55339442 CR1-11_Crp 46 - 55339096 55339442 0 2 232,79, 0,267, -,-, 37046 LINE CR1 1007 chr1 55403959 55404599 Mariner1_GG 532 - 55403959 55404599 0 2 459,181, 0,459, -,-, 37088 DNA TcMar-Mariner 1007 chr1 55411836 55412326 CR1-X1 554 - 55411836 55412326 0 2 159,331, 0,159, -,-, 37095 LINE CR1 1007 chr1 55435079 55436270 L2-3_Crp 244 - 55435079 55436270 0 2 123,143, 0,1048, -,-, 37118 LINE L2 1008 chr1 55504600 55505086 Char12Mar1_GG 627 - 55504600 55505086 0 2 336,132, 0,354, -,-, 37182 DNA hAT-Charlie 1008 chr1 55561848 55561907 (CACACG)n 358 + 55561848 55561907 0 2 10,24, 0,35, +,+, 37213 Simple_repeat Simple_repeat 1009 chr1 55587025 55587477 CR1-11_Crp 286 - 55587025 55587477 0 2 100,155, 0,297, -,-, 37234 LINE CR1 1009 chr1 55595133 55595211 (TTGTT)n 368 + 55595133 55595211 0 2 13,14, 0,64, +,+, 37237 Simple_repeat Simple_repeat 1009 chr1 55611118 55611178 (A)n 1000 + 55611118 55611178 0 2 17,17, 0,43, +,+, 37244 Simple_repeat Simple_repeat 1010 chr1 55712203 55713280 CR1-C4 614 - 55712203 55713280 0 2 427,548, 0,529, -,-, 37294 LINE CR1 1010 chr1 55788195 55788652 TguLTR5e 429 - 55788195 55788652 0 2 122,93, 0,364, -,-, 37345 LTR ERVL 1010 chr1 55788199 55788512 GGLTR5B 352 - 55788199 55788512 0 2 134,52, 0,261, -,-, 37346 LTR ERVL 1010 chr1 55794041 55794911 CR1-D 673 + 55794041 55794911 0 2 266,604, 0,266, +,+, 37352 LINE CR1 1010 chr1 55795891 55796602 GGLTR5A 414 + 55795891 55796602 0 2 167,154, 0,557, +,+, 37353 LTR ERVL 1010 chr1 55796221 55796373 GGERVL-C-int 745 + 55796221 55796373 0 2 70,82, 0,70, +,+, 37355 LTR ERVL 1012 chr1 55970341 55970985 CR1-11_Crp 240 + 55970341 55970985 0 2 218,390, 0,254, +,+, 37442 LINE CR1 1012 chr1 56065178 56065733 CR1-D2 598 - 56065178 56065733 0 2 337,217, 0,338, -,-, 37498 LINE CR1 1013 chr1 56212800 56213240 CR1-L3B_Croc 429 + 56212800 56213240 0 2 257,47, 0,393, +,+, 37596 LINE CR1 1014 chr1 56274230 56274875 Char12Mar1_GG 521 - 56274230 56274875 0 2 41,64, 0,581, -,-, 37641 DNA hAT-Charlie 1015 chr1 56369866 56371757 CR1-D 810 + 56369866 56371757 0 2 1357,523, 0,1368, +,+, 37681 LINE CR1 1015 chr1 56409935 56411897 CR1-F2 594 + 56409935 56411897 0 2 74,123, 0,1839, +,+, 37703 LINE CR1 1015 chr1 56414643 56415044 CR1-F0 200 + 56414643 56415044 0 2 14,327, 0,74, +,+, 37704 LINE CR1 1015 chr1 56444221 56444655 Char12Mar1_GG 764 - 56444221 56444655 0 2 107,318, 0,116, -,-, 37720 DNA hAT-Charlie 1015 chr1 56450343 56451991 GGLTR8B 455 + 56450343 56451991 0 2 409,92, 0,1556, +,+, 37724 LTR ERVL 1015 chr1 56451050 56451904 CR1-X 665 - 56451050 56451904 0 2 238,609, 0,245, -,-, 37727 LINE CR1 1015 chr1 56485897 56486230 Char12Mar1_GG 647 - 56485897 56486230 0 2 96,235, 0,98, -,-, 37752 DNA hAT-Charlie 1016 chr1 56535656 56536491 CR1-X2 382 - 56535656 56536491 0 2 132,161, 0,674, -,-, 37781 LINE CR1 1016 chr1 56538758 56539038 CR1-C4 561 - 56538758 56539038 0 2 59,213, 0,67, -,-, 37782 LINE CR1 1016 chr1 56544508 56545205 ENS1B-LTR 152 + 56544508 56545205 0 2 297,400, 0,297, +,+, 37785 LTR ERVL 1016 chr1 56561424 56562236 CR1-Y4 653 - 56561424 56562236 0 2 767,45, 0,767, -,-, 37793 LINE CR1 1016 chr1 56577696 56579672 CR1-D2 660 - 56577696 56579672 0 3 182,137,1042, 0,182,934, -,-,-, 37804 LINE CR1 1018 chr1 56768302 56769016 GGLTR8A 451 + 56768302 56769016 0 2 371,339, 0,375, +,+, 37900 LTR ERVL 1018 chr1 56798916 56799802 CR1-F2 339 - 56798916 56799802 0 2 728,77, 0,809, -,-, 37918 LINE CR1 1019 chr1 56939471 56939808 CR1-E 779 + 56939471 56939808 0 2 89,246, 0,91, +,+, 37988 LINE CR1 1019 chr1 56945848 56945975 (CCCCG)n 420 + 56945848 56945975 0 2 17,76, 0,51, +,+, 37990 Simple_repeat Simple_repeat 1019 chr1 56953967 56955288 CR1-D 433 - 56953967 56955288 0 2 375,946, 0,375, -,-, 37997 LINE CR1 1020 chr1 57078213 57078829 CR1-Y4 533 + 57078213 57078829 0 2 241,368, 0,248, +,+, 38056 LINE CR1 1021 chr1 57187505 57187852 CR1-C4 601 + 57187505 57187852 0 2 127,220, 0,127, +,+, 38113 LINE CR1 1021 chr1 57247272 57248979 CR1-L3B_Croc 284 - 57247272 57248979 0 3 125,187,1331, 0,160,376, -,-,-, 38136 LINE CR1 1021 chr1 57266789 57267120 CR1-F0 566 + 57266789 57267120 0 2 283,48, 0,283, +,+, 38148 LINE CR1 1024 chr1 57541512 57542713 CR1-F2 668 + 57541512 57542713 0 2 1105,96, 0,1105, +,+, 38303 LINE CR1 1024 chr1 57626044 57626472 CR1-Y1_Aves 447 + 57626044 57626472 0 2 311,82, 0,346, +,+, 38358 LINE CR1 1024 chr1 57635204 57635550 CR1-X2 472 + 57635204 57635550 0 2 258,86, 0,260, +,+, 38363 LINE CR1 1026 chr1 57808601 57810483 CR1-D2 596 - 57808601 57810483 0 2 71,330, 0,1552, -,-, 38488 LINE CR1 1026 chr1 57841013 57844001 CR1-L3B_Croc 220 + 57841013 57844001 0 2 186,230, 0,2758, +,+, 38512 LINE CR1 1026 chr1 57885994 57887373 Char12Mar1_GG 625 - 57885994 57887373 0 2 353,197, 0,1182, -,-, 38559 DNA hAT-Charlie 1028 chr1 58083598 58086852 CR1-C3 612 + 58083598 58086852 0 2 402,1229, 0,2025, +,+, 38733 LINE CR1 1028 chr1 58084011 58085607 CR1-H 750 + 58084011 58085607 0 2 1030,556, 0,1040, +,+, 38734 LINE CR1 1028 chr1 58109784 58110488 CR1-E 556 + 58109784 58110488 0 2 280,424, 0,280, +,+, 38754 LINE CR1 1028 chr1 58153250 58153447 hAT6-N1_Croc 184 + 58153250 58153447 0 2 116,49, 0,148, +,+, 38807 DNA hAT-hAT6 1028 chr1 58184977 58185519 GGLTR5A 343 - 58184977 58185519 0 2 113,353, 0,189, -,-, 38832 LTR ERVL 1029 chr1 58257325 58257767 CR1-Y2_Aves 267 + 58257325 58257767 0 2 51,171, 0,271, +,+, 38891 LINE CR1 1029 chr1 58276511 58277847 CR1-Y2_Aves 266 + 58276511 58277847 0 4 602,76,84,196, 0,667,860,1140, +,+,+,+, 38900 LINE CR1 1029 chr1 58280362 58281786 CR1-Y1_Aves 32 + 58280362 58281786 0 2 620,351, 0,1073, +,+, 38901 LINE CR1 1029 chr1 58302125 58305288 GGERVL18-int 617 - 58302125 58305288 0 3 114,920,2128, 0,115,1035, -,-,-, 38915 LTR ERVL 1030 chr1 58333574 58335030 CR1-D2 489 - 58333574 58335030 0 2 128,122, 0,1334, -,-, 38941 LINE CR1 1030 chr1 58333665 58334909 CR1-C4 606 + 58333665 58334909 0 2 928,158, 0,1086, +,+, 38942 LINE CR1 1030 chr1 58356246 58357778 CR1-X 647 + 58356246 58357778 0 2 166,1359, 0,173, +,+, 38959 LINE CR1 1030 chr1 58362254 58362748 GGLTR5A 549 - 58362254 58362748 0 2 212,257, 0,237, -,-, 38967 LTR ERVL 1030 chr1 58406332 58406428 (CTTT)n 316 + 58406332 58406428 0 2 15,41, 0,55, +,+, 39005 Simple_repeat Simple_repeat 1030 chr1 58444634 58445802 CR1-F2 505 + 58444634 58445802 0 2 489,655, 0,513, +,+, 39037 LINE CR1 1031 chr1 58479159 58479759 CR1-F2 549 + 58479159 58479759 0 2 302,298, 0,302, +,+, 39066 LINE CR1 1031 chr1 58533284 58534906 CR1-Y1_Aves 324 - 58533284 58534906 0 2 580,1042, 0,580, -,-, 39101 LINE CR1 1031 chr1 58562572 58564745 CR1-G 834 - 58562572 58564745 0 2 1032,1141, 0,1032, -,-, 39130 LINE CR1 1032 chr1 58606149 58607759 GGERVL18-int 767 - 58606149 58607759 0 2 169,1441, 0,169, -,-, 39163 LTR ERVL 1032 chr1 58626808 58626923 (A)n 916 + 58626808 58626923 0 2 21,38, 0,77, +,+, 39176 Simple_repeat Simple_repeat 1032 chr1 58706752 58707638 CR1-L3B_Croc 375 + 58706752 58707638 0 2 86,87, 0,799, +,+, 39241 LINE CR1 1033 chr1 58784668 58785322 CR1-F2 524 - 58784668 58785322 0 2 389,232, 0,422, -,-, 39292 LINE CR1 1033 chr1 58815979 58816914 CR1-Y4 550 - 58815979 58816914 0 2 405,304, 0,631, -,-, 39309 LINE CR1 1034 chr1 58859547 58860644 CR1-Y2_Aves 336 - 58859547 58860644 0 2 172,897, 0,200, -,-, 39335 LINE CR1 1035 chr1 59010027 59012185 Mariner1_GG 598 - 59010027 59012185 0 2 1102,142, 0,2016, -,-, 39408 DNA TcMar-Mariner 1036 chr1 59186678 59186754 (ATGCAT)n 408 + 59186678 59186754 0 2 15,27, 0,49, +,+, 39484 Simple_repeat Simple_repeat 1036 chr1 59210040 59210529 CR1-C4 350 - 59210040 59210529 0 2 245,229, 0,260, -,-, 39502 LINE CR1 1036 chr1 59219297 59219423 CR1-D2 631 - 59219297 59219423 0 2 76,42, 0,84, -,-, 39507 LINE CR1 1036 chr1 59233672 59233991 Char12Mar1_GG 422 - 59233672 59233991 0 2 104,215, 0,104, -,-, 39516 DNA hAT-Charlie 1037 chr1 59264042 59265146 CR1-C4 534 + 59264042 59265146 0 2 213,242, 0,862, +,+, 39539 LINE CR1 1037 chr1 59300370 59301716 CR1-F2 491 + 59300370 59301716 0 2 187,838, 0,508, +,+, 39564 LINE CR1 1037 chr1 59373965 59374143 TguLTR5e 524 + 59373965 59374143 0 2 78,93, 0,85, +,+, 39600 LTR ERVL 1037 chr1 59374693 59375157 GGERVL18-int 710 + 59374693 59375157 0 2 133,331, 0,133, +,+, 39604 LTR ERVL 1038 chr1 59444876 59447220 CR1-Y2_Aves 113 + 59444876 59447220 0 2 724,1030, 0,1314, +,+, 39641 LINE CR1 1038 chr1 59466368 59466983 GGLTR11 452 - 59466368 59466983 0 3 298,187,58, 0,320,557, -,-,-, 39650 LTR ERV1 1038 chr1 59491739 59492136 CR1-D2 618 - 59491739 59492136 0 2 42,355, 0,42, -,-, 39661 LINE CR1 1039 chr1 59521579 59522733 CR1-Y 448 - 59521579 59522733 0 2 757,370, 0,784, -,-, 39682 LINE CR1 1039 chr1 59635473 59635720 CR1-X 683 + 59635473 59635720 0 2 142,103, 0,144, +,+, 39734 LINE CR1 1040 chr1 59689234 59689941 CR1-11_Crp 229 - 59689234 59689941 0 2 172,131, 0,576, -,-, 39754 LINE CR1 1041 chr1 59898790 59898927 GGLTR6 721 - 59898790 59898927 0 2 79,58, 0,79, -,-, 39870 LTR ERVL 1042 chr1 59901081 59901621 CR1-Y2_Aves 232 - 59901081 59901621 0 2 162,378, 0,162, -,-, 39873 LINE CR1 1042 chr1 59964955 59965509 CR1-Y1_Aves 347 - 59964955 59965509 0 2 136,243, 0,311, -,-, 39904 LINE CR1 1043 chr1 60047361 60049336 CR1-C4 595 - 60047361 60049336 0 2 257,1718, 0,257, -,-, 39932 LINE CR1 1043 chr1 60066206 60066772 CR1-Y4 648 - 60066206 60066772 0 2 459,107, 0,459, -,-, 39946 LINE CR1 1043 chr1 60090847 60091594 Char12Mar1_GG 651 - 60090847 60091594 0 2 626,115, 0,632, -,-, 39963 DNA hAT-Charlie 1043 chr1 60140359 60140736 CR1-C4 738 + 60140359 60140736 0 2 223,154, 0,223, +,+, 39986 LINE CR1 1044 chr1 60219459 60219726 CR1-X1 644 - 60219459 60219726 0 2 146,121, 0,146, -,-, 40013 LINE CR1 1044 chr1 60246401 60246536 GA-rich 182 + 60246401 60246536 0 2 47,36, 0,99, +,+, 40024 Low_complexity Low_complexity 1045 chr1 60296161 60297259 CR1-Y2_Aves 235 + 60296161 60297259 0 3 120,75,516, 0,141,582, +,+,+, 40044 LINE CR1 1045 chr1 60305144 60305673 CR1-X2 546 - 60305144 60305673 0 2 198,286, 0,243, -,-, 40050 LINE CR1 1045 chr1 60315582 60316552 CR1-L3B_Croc 181 + 60315582 60316552 0 3 68,240,210, 0,212,760, +,+,+, 40053 LINE CR1 1045 chr1 60392348 60393754 CR1-Y2_Aves 334 + 60392348 60393754 0 3 698,378,316, 0,710,1090, +,+,+, 40094 LINE CR1 1046 chr1 60450680 60452836 CR1-L3B_Croc 85 + 60450680 60452836 0 2 579,435, 0,1721, +,+, 40118 LINE CR1 1047 chr1 60651718 60652969 CR1-Y2 218 + 60651718 60652969 0 2 1039,138, 0,1113, +,+, 40197 LINE CR1 1048 chr1 60693589 60694538 CR1-Y2_Aves 188 - 60693589 60694538 0 2 478,373, 0,576, -,-, 40211 LINE CR1 1048 chr1 60815643 60816294 CR1-Y3 691 - 60815643 60816294 0 2 303,345, 0,306, -,-, 40275 LINE CR1 1049 chr1 60834798 60836047 CR1-L3B_Croc 151 + 60834798 60836047 0 3 217,235,279, 0,509,970, +,+,+, 40280 LINE CR1 1050 chr1 60984357 60985605 CR1-11_Crp 219 + 60984357 60985605 0 3 122,375,525, 0,185,723, +,+,+, 40370 LINE CR1 1050 chr1 61049281 61049927 CR1-X1 550 - 61049281 61049927 0 2 95,551, 0,95, -,-, 40395 LINE CR1 1051 chr1 61079782 61080472 CR1-C4 615 + 61079782 61080472 0 2 103,587, 0,103, +,+, 40406 LINE CR1 1051 chr1 61092104 61092621 CR1-Y2 422 - 61092104 61092621 0 2 87,321, 0,196, -,-, 40417 LINE CR1 1051 chr1 61125072 61125510 CR1-L3B_Croc 276 + 61125072 61125510 0 2 206,160, 0,278, +,+, 40433 LINE CR1 1052 chr1 61224739 61225134 CR1-Y2_Aves 250 - 61224739 61225134 0 2 255,140, 0,255, -,-, 40488 LINE CR1 1052 chr1 61289015 61290302 CR1-Y4 641 + 61289015 61290302 0 2 547,68, 0,1219, +,+, 40531 LINE CR1 1052 chr1 61319483 61319844 CR1-D2 605 - 61319483 61319844 0 2 161,200, 0,161, -,-, 40551 LINE CR1 1053 chr1 61393183 61394268 CR1-C4 629 - 61393183 61394268 0 3 264,599,222, 0,264,863, -,-,-, 40580 LINE CR1 1054 chr1 61569934 61571632 CR1-C4 662 + 61569934 61571632 0 2 647,1051, 0,647, +,+, 40675 LINE CR1 1055 chr1 61657890 61658332 CR1-X1 680 + 61657890 61658332 0 2 117,317, 0,125, +,+, 40727 LINE CR1 1055 chr1 61699351 61701150 CR1-Y1_Aves 445 - 61699351 61701150 0 2 318,1211, 0,588, -,-, 40751 LINE CR1 1055 chr1 61707337 61707449 (CCCCGG)n 428 + 61707337 61707449 0 2 9,6, 0,106, +,+, 40763 Simple_repeat Simple_repeat 1056 chr1 61850399 61850670 Char12Mar1_GG 768 - 61850399 61850670 0 2 40,227, 0,44, -,-, 40838 DNA hAT-Charlie 1056 chr1 61852884 61852985 (TTTTGTAT)n 612 + 61852884 61852985 0 2 20,29, 0,72, +,+, 40840 Simple_repeat Simple_repeat 1057 chr1 61922547 61924421 CR1-D2 405 - 61922547 61924421 0 3 120,1236,376, 0,153,1498, -,-,-, 40873 LINE CR1 1059 chr1 62137815 62138449 CR1-Y1_Aves 563 + 62137815 62138449 0 2 524,82, 0,552, +,+, 40956 LINE CR1 1059 chr1 62217543 62218465 ENS1B-LTR 473 - 62217543 62218465 0 2 418,380, 0,542, -,-, 40984 LTR ERVL 1059 chr1 62241511 62244591 CR1-H 206 + 62241511 62244591 0 3 267,124,2617, 0,313,463, +,+,+, 40992 LINE CR1 1060 chr1 62267330 62268390 CR1-X2 318 - 62267330 62268390 0 2 422,416, 0,644, -,-, 40999 LINE CR1 1060 chr1 62326316 62327480 CR1-B2 559 - 62326316 62327480 0 2 936,50, 0,1114, -,-, 41033 LINE CR1 1061 chr1 62469334 62469864 GGLTR3F1 940 - 62469334 62469864 0 2 494,36, 0,494, -,-, 41104 LTR ERVL 1061 chr1 62485591 62486167 CR1-D2 694 + 62485591 62486167 0 2 346,230, 0,346, +,+, 41112 LINE CR1 1062 chr1 62565875 62566992 CR1-C4 572 - 62565875 62566992 0 2 390,484, 0,633, -,-, 41155 LINE CR1 1062 chr1 62604973 62606833 CR1-C2 519 - 62604973 62606833 0 2 415,383, 0,1477, -,-, 41181 LINE CR1 1062 chr1 62606911 62609451 CR1-D 501 + 62606911 62609451 0 2 739,1438, 0,1102, +,+, 41183 LINE CR1 1062 chr1 62630033 62631580 CR1-F2 386 + 62630033 62631580 0 2 241,1306, 0,241, +,+, 41196 LINE CR1 1064 chr1 62894019 62894464 CR1-C4 591 + 62894019 62894464 0 2 245,199, 0,246, +,+, 41346 LINE CR1 1064 chr1 62894598 62896079 CR1-F2 524 - 62894598 62896079 0 2 751,264, 0,1217, -,-, 41347 LINE CR1 1065 chr1 62920447 62920852 CR1-F2 682 - 62920447 62920852 0 2 79,39, 0,366, -,-, 41364 LINE CR1 1065 chr1 62953794 62953861 (ATAA)n 288 + 62953794 62953861 0 2 8,35, 0,32, +,+, 41392 Simple_repeat Simple_repeat 1065 chr1 63041424 63044128 CR1-D 522 - 63041424 63044128 0 3 1121,200,326, 0,1121,2378, -,-,-, 41445 LINE CR1 1066 chr1 63123513 63124239 CR1-Y2_Aves 190 - 63123513 63124239 0 2 341,339, 0,387, -,-, 41497 LINE CR1 1066 chr1 63128147 63129706 CR1-F0 339 + 63128147 63129706 0 2 204,190, 0,1369, +,+, 41501 LINE CR1 1066 chr1 63156628 63157750 Char12Mar1_GG 491 - 63156628 63157750 0 2 856,261, 0,861, -,-, 41521 DNA hAT-Charlie 1067 chr1 63207551 63207867 Penelope1_Vert 462 - 63207551 63207867 0 2 53,123, 0,193, -,-, 41549 LINE Penelope 1067 chr1 63262277 63262329 (TTGTATA)n 518 + 63262277 63262329 0 2 12,9, 0,43, +,+, 41585 Simple_repeat Simple_repeat 1069 chr1 63462022 63463702 CR1-C4 601 - 63462022 63463702 0 2 383,952, 0,728, -,-, 41733 LINE CR1 1069 chr1 63517374 63518981 CR1-Y2_Aves 297 - 63517374 63518981 0 3 153,812,616, 0,179,991, -,-,-, 41763 LINE CR1 1069 chr1 63541821 63542360 GGLTR5B 638 + 63541821 63542360 0 2 20,473, 0,66, +,+, 41786 LTR ERVL 1070 chr1 63613595 63614871 CR1-C4 603 + 63613595 63614871 0 2 1219,57, 0,1219, +,+, 41838 LINE CR1 1070 chr1 63692312 63694067 CR1-C4 664 - 63692312 63694067 0 2 824,83, 0,1672, -,-, 41894 LINE CR1 1071 chr1 63724461 63727459 Mariner1_GG 622 - 63724461 63727459 0 2 375,953, 0,2045, -,-, 41916 DNA TcMar-Mariner 1071 chr1 63734070 63734564 CR1-X1 418 + 63734070 63734564 0 2 166,328, 0,166, +,+, 41924 LINE CR1 1071 chr1 63770693 63771537 Char12Mar1_GG 552 - 63770693 63771537 0 2 49,67, 0,777, -,-, 41964 DNA hAT-Charlie 1071 chr1 63774546 63775044 CR1-X 571 - 63774546 63775044 0 2 293,205, 0,293, -,-, 41969 LINE CR1 1071 chr1 63798022 63798366 CR1-X1 478 + 63798022 63798366 0 2 69,186, 0,158, +,+, 41992 LINE CR1 1072 chr1 63839294 63840143 CR1-D2 690 + 63839294 63840143 0 2 332,517, 0,332, +,+, 42021 LINE CR1 1072 chr1 63843119 63844483 Mariner1_GG 591 - 63843119 63844483 0 2 460,822, 0,542, -,-, 42025 DNA TcMar-Mariner 1072 chr1 63890231 63892123 CR1-C3 677 - 63890231 63892123 0 2 1407,201, 0,1691, -,-, 42048 LINE CR1 1072 chr1 63925543 63926152 CR1-D 744 - 63925543 63926152 0 2 419,190, 0,419, -,-, 42076 LINE CR1 1072 chr1 63933804 63936065 CR1-D2 576 + 63933804 63936065 0 3 55,525,1070, 0,666,1191, +,+,+, 42081 LINE CR1 1073 chr1 64004268 64004528 Char12Mar1_GG 739 - 64004268 64004528 0 2 74,186, 0,74, -,-, 42124 DNA hAT-Charlie 1074 chr1 64147869 64147948 (A)n 1000 + 64147869 64147948 0 2 23,22, 0,57, +,+, 42225 Simple_repeat Simple_repeat 1074 chr1 64214492 64215345 Mariner1_GG 391 - 64214492 64215345 0 2 293,550, 0,303, -,-, 42271 DNA TcMar-Mariner 1075 chr1 64243832 64243932 A-rich 601 + 64243832 64243932 0 2 39,35, 0,65, +,+, 42286 Low_complexity Low_complexity 1077 chr1 64487604 64488670 Mariner1_GG 595 - 64487604 64488670 0 3 51,253,579, 0,231,487, -,-,-, 42429 DNA TcMar-Mariner 1077 chr1 64508859 64509259 CR1-X1 329 + 64508859 64509259 0 2 256,143, 0,257, +,+, 42439 LINE CR1 1077 chr1 64607417 64608010 CR1-Y2_Aves 197 + 64607417 64608010 0 2 291,110, 0,483, +,+, 42495 LINE CR1 1078 chr1 64708665 64709149 CR1-F2 531 + 64708665 64709149 0 2 231,253, 0,231, +,+, 42546 LINE CR1 1079 chr1 64752503 64753020 CR1-X2 545 + 64752503 64753020 0 3 79,87,338, 0,92,179, +,+,+, 42579 LINE CR1 1079 chr1 64849089 64850303 CR1-C4 473 + 64849089 64850303 0 2 735,479, 0,735, +,+, 42647 LINE CR1 1080 chr1 64959384 64959872 CR1-Y4 713 + 64959384 64959872 0 2 303,167, 0,321, +,+, 42717 LINE CR1 1081 chr1 65014338 65014564 CR1-H2 818 + 65014338 65014564 0 2 117,109, 0,117, +,+, 42749 LINE CR1 1081 chr1 65014561 65016396 CR1-C3 569 - 65014561 65016396 0 2 888,947, 0,888, -,-, 42750 LINE CR1 1081 chr1 65090169 65090997 Mariner1_GG 630 - 65090169 65090997 0 2 596,232, 0,596, -,-, 42800 DNA TcMar-Mariner 1081 chr1 65101540 65102150 CR1-Y2_Aves 419 + 65101540 65102150 0 2 288,322, 0,288, +,+, 42806 LINE CR1 1081 chr1 65107638 65108066 CR1-11_Crp 247 - 65107638 65108066 0 2 234,78, 0,350, -,-, 42814 LINE CR1 1082 chr1 65166176 65166674 CR1-Y2_Aves 348 + 65166176 65166674 0 2 196,302, 0,196, +,+, 42846 LINE CR1 1082 chr1 65257338 65257822 CR1-D2 468 - 65257338 65257822 0 2 315,169, 0,315, -,-, 42897 LINE CR1 1082 chr1 65270888 65272221 CR1-Y4 564 + 65270888 65272221 0 2 61,229, 0,1104, +,+, 42906 LINE CR1 1082 chr1 65270949 65271261 CR1-X2 639 - 65270949 65271261 0 2 260,52, 0,260, -,-, 42907 LINE CR1 1083 chr1 65294058 65294994 CR1-F2 556 - 65294058 65294994 0 2 289,570, 0,366, -,-, 42928 LINE CR1 1083 chr1 65302695 65303701 CR1-F2 473 + 65302695 65303701 0 2 715,291, 0,715, +,+, 42937 LINE CR1 1083 chr1 65338819 65339255 CR1-C4 616 - 65338819 65339255 0 2 11,342, 0,94, -,-, 42957 LINE CR1 1085 chr1 65637593 65638681 CR1-F2 463 - 65637593 65638681 0 2 201,887, 0,201, -,-, 43125 LINE CR1 1086 chr1 65724283 65724588 REP131 458 - 65724283 65724588 0 2 59,70, 0,235, -,-, 43178 DNA? DNA? 1086 chr1 65765230 65766166 CR1-D2 463 - 65765230 65766166 0 2 286,650, 0,286, -,-, 43206 LINE CR1 1086 chr1 65769855 65769931 (GTTT)n 412 + 65769855 65769931 0 2 9,27, 0,49, +,+, 43211 Simple_repeat Simple_repeat 1087 chr1 65899864 65901275 CR1-C4 311 + 65899864 65901275 0 2 1061,337, 0,1074, +,+, 43299 LINE CR1 1088 chr1 65943414 65943451 (AATAGT)n 510 + 65943414 65943451 0 2 6,6, 0,31, +,+, 43336 Simple_repeat Simple_repeat 1089 chr1 66063570 66063626 (TGTT)n 456 + 66063570 66063626 0 2 10,8, 0,48, +,+, 43414 Simple_repeat Simple_repeat 1089 chr1 66078446 66078507 (TTTCTT)n 566 + 66078446 66078507 0 2 10,18, 0,43, +,+, 43423 Simple_repeat Simple_repeat 1089 chr1 66085851 66085911 (GCAACA)n 370 + 66085851 66085911 0 2 6,25, 0,35, +,+, 43428 Simple_repeat Simple_repeat 1089 chr1 66157779 66158038 Char12Mar1_GG 617 - 66157779 66158038 0 2 185,74, 0,185, -,-, 43468 DNA hAT-Charlie 1090 chr1 66295432 66296622 Char12Mar1_GG 701 - 66295432 66296622 0 3 100,64,435, 0,614,755, -,-,-, 43549 DNA hAT-Charlie 1091 chr1 66337818 66338367 CR1-11_Crp 319 - 66337818 66338367 0 2 186,177, 0,372, -,-, 43585 LINE CR1 1091 chr1 66396362 66398456 CR1-L3A_Croc 195 - 66396362 66398456 0 3 182,451,261, 0,1353,1833, -,-,-, 43619 LINE CR1 1092 chr1 66472715 66473641 CR1-Y2_Aves 313 + 66472715 66473641 0 2 463,456, 0,470, +,+, 43671 LINE CR1 1092 chr1 66533276 66533341 (CCCCAG)n 382 + 66533276 66533341 0 2 24,19, 0,46, +,+, 43702 Simple_repeat Simple_repeat 1092 chr1 66547304 66548293 CR1-C4 653 + 66547304 66548293 0 2 886,103, 0,886, +,+, 43717 LINE CR1 1093 chr1 66606575 66606760 Char12Mar1_GG 614 - 66606575 66606760 0 2 72,113, 0,72, -,-, 43739 DNA hAT-Charlie 1093 chr1 66653266 66653319 (TCTTT)n 492 + 66653266 66653319 0 2 9,11, 0,42, +,+, 43768 Simple_repeat Simple_repeat 1093 chr1 66657221 66657597 CR1-Y2_Aves 234 - 66657221 66657597 0 2 142,184, 0,192, -,-, 43772 LINE CR1 1093 chr1 66666235 66666987 GGLTR3C1 561 + 66666235 66666987 0 3 135,149,82, 0,521,670, +,+,+, 43777 LTR ERVL 1093 chr1 66680229 66681395 CR1-D 740 + 66680229 66681395 0 2 396,766, 0,400, +,+, 43786 LINE CR1 1094 chr1 66720458 66721404 CR1-C4 591 - 66720458 66721404 0 2 126,531, 0,415, -,-, 43799 LINE CR1 1094 chr1 66805595 66808301 CR1-D 498 - 66805595 66808301 0 2 1999,692, 0,2014, -,-, 43856 LINE CR1 1094 chr1 66838611 66839422 CR1-C4 593 + 66838611 66839422 0 2 317,290, 0,521, +,+, 43876 LINE CR1 1095 chr1 66910047 66911679 Char12Mar1_GG 593 - 66910047 66911679 0 2 644,790, 0,842, -,-, 43917 DNA hAT-Charlie 1095 chr1 66922557 66925281 Char12Mar1_GG 674 - 66922557 66925281 0 3 312,60,57, 0,312,2667, -,-,-, 43923 DNA hAT-Charlie 1096 chr1 67033752 67033797 (CAATAA)n 458 + 67033752 67033797 0 2 7,7, 0,38, +,+, 43985 Simple_repeat Simple_repeat 1097 chr1 67142459 67145470 GGERVL-C-int 651 - 67142459 67145470 0 3 567,35,258, 0,567,2753, -,-,-, 44050 LTR ERVL 1097 chr1 67162876 67163579 CR1-Y1_Aves 348 + 67162876 67163579 0 2 204,101, 0,602, +,+, 44065 LINE CR1 1097 chr1 67163882 67164142 GGERVL-A-int 380 - 67163882 67164142 0 2 116,108, 0,152, -,-, 44067 LTR ERVL 1097 chr1 67164133 67164540 GGLTR3C2 626 - 67164133 67164540 0 2 70,243, 0,164, -,-, 44068 LTR ERVL 1098 chr1 67284106 67285172 CR1-Y2_Aves 327 - 67284106 67285172 0 3 54,243,382, 0,244,684, -,-,-, 44116 LINE CR1 1098 chr1 67356890 67357491 CR1-C3 589 - 67356890 67357491 0 2 491,109, 0,492, -,-, 44161 LINE CR1 1098 chr1 67357851 67358910 GGERV20_I-int 390 - 67357851 67358910 0 2 669,359, 0,700, -,-, 44162 LTR ERVL 1098 chr1 67359554 67360438 GGERV20_I-int 386 + 67359554 67360438 0 2 126,143, 0,741, +,+, 44164 LTR ERVL 1098 chr1 67359664 67360293 CR1-F2 595 - 67359664 67360293 0 2 158,471, 0,158, -,-, 44165 LINE CR1 1099 chr1 67398960 67399038 (CATACA)n 398 + 67398960 67399038 0 2 13,23, 0,55, +,+, 44179 Simple_repeat Simple_repeat 1099 chr1 67421201 67421295 (A)n 806 + 67421201 67421295 0 2 32,26, 0,68, +,+, 44192 Simple_repeat Simple_repeat 1102 chr1 67789333 67789966 CR1-Y2_Aves 333 - 67789333 67789966 0 2 160,401, 0,232, -,-, 44383 LINE CR1 1102 chr1 67792136 67792567 CR1-Y2_Aves 364 + 67792136 67792567 0 2 206,84, 0,347, +,+, 44386 LINE CR1 1102 chr1 67804851 67806078 CR1-L3A_Croc 238 + 67804851 67806078 0 2 252,276, 0,951, +,+, 44393 LINE CR1 1102 chr1 67816774 67818467 Charlie12_GG 626 - 67816774 67818467 0 2 1585,104, 0,1589, -,-, 44400 DNA hAT-Charlie 1103 chr1 67904176 67904591 CR1-D2 630 - 67904176 67904591 0 2 122,293, 0,122, -,-, 44443 LINE CR1 1103 chr1 67927533 67929398 CR1-F 618 - 67927533 67929398 0 2 1502,331, 0,1534, -,-, 44461 LINE CR1 1103 chr1 68001244 68001715 CR1-F2 598 + 68001244 68001715 0 2 305,162, 0,309, +,+, 44502 LINE CR1 1103 chr1 68019165 68021579 CR1-E 606 - 68019165 68021579 0 2 1561,613, 0,1801, -,-, 44515 LINE CR1 1104 chr1 68041191 68042250 CR1-C4 477 - 68041191 68042250 0 3 106,351,582, 0,106,477, -,-,-, 44522 LINE CR1 1105 chr1 68204537 68205571 CR1-H 310 - 68204537 68205571 0 2 272,762, 0,272, -,-, 44598 LINE CR1 1105 chr1 68236718 68237262 Charlie12_GG 518 - 68236718 68237262 0 2 51,487, 0,57, -,-, 44616 DNA hAT-Charlie 1105 chr1 68259025 68259402 CR1-C2 570 - 68259025 68259402 0 2 291,67, 0,310, -,-, 44625 LINE CR1 1106 chr1 68354127 68355621 CR1-Y3 509 - 68354127 68355621 0 3 85,13,235, 0,143,1259, -,-,-, 44656 LINE CR1 1106 chr1 68354212 68355389 CR1-F2 579 + 68354212 68355389 0 2 58,1078, 0,99, +,+, 44657 LINE CR1 1106 chr1 68381764 68382089 CR1-Y2_Aves 140 + 68381764 68382089 0 2 151,147, 0,178, +,+, 44671 LINE CR1 1106 chr1 68392813 68396734 CR1-Y2_Aves 323 - 68392813 68396734 0 2 264,108, 0,3813, -,-, 44676 LINE CR1 1106 chr1 68394720 68395062 GGLTR5B 629 - 68394720 68395062 0 2 181,144, 0,198, -,-, 44677 LTR ERVL 1107 chr1 68421639 68422975 Charlie12_GG 621 - 68421639 68422975 0 2 407,185, 0,1151, -,-, 44692 DNA hAT-Charlie 1107 chr1 68438073 68439935 CR1-C4 514 + 68438073 68439935 0 2 1056,57, 0,1805, +,+, 44699 LINE CR1 1107 chr1 68484868 68485303 Char12Mar1_GG 648 - 68484868 68485303 0 2 260,175, 0,260, -,-, 44726 DNA hAT-Charlie 1107 chr1 68514530 68514961 CR1-X1 364 - 68514530 68514961 0 2 149,92, 0,339, -,-, 44738 LINE CR1 1108 chr1 68552832 68555263 CR1-D 762 - 68552832 68555263 0 2 1600,828, 0,1603, -,-, 44764 LINE CR1 1108 chr1 68577706 68577752 (TACA)n 516 + 68577706 68577752 0 2 9,6, 0,40, +,+, 44780 Simple_repeat Simple_repeat 1109 chr1 68697620 68698188 CR1-Y2_Aves 201 + 68697620 68698188 0 2 268,247, 0,321, +,+, 44821 LINE CR1 1109 chr1 68763532 68764465 CR1-D 782 - 68763532 68764465 0 2 420,513, 0,420, -,-, 44850 LINE CR1 1111 chr1 68944264 68944714 CR1-13_AMi 323 - 68944264 68944714 0 2 84,203, 0,247, -,-, 44931 LINE CR1 1111 chr1 69000003 69003346 Char12Mar1_GG 526 - 69000003 69003346 0 2 178,610, 0,2733, -,-, 44958 DNA hAT-Charlie 1111 chr1 69005381 69005974 CR1-L3A_Croc 247 + 69005381 69005974 0 2 254,336, 0,257, +,+, 44964 LINE CR1 1111 chr1 69030480 69031285 CR1-L3A_Croc 152 + 69030480 69031285 0 2 152,393, 0,412, +,+, 44977 LINE CR1 1111 chr1 69043982 69044423 Mariner1b_GG 696 - 69043982 69044423 0 2 348,90, 0,351, -,-, 44984 DNA TcMar-Mariner 1111 chr1 69066085 69066817 CR1-Y1_Aves 373 + 69066085 69066817 0 2 94,180, 0,552, +,+, 45001 LINE CR1 1111 chr1 69066165 69066645 CR1-X2 320 + 69066165 69066645 0 2 114,323, 0,157, +,+, 45002 LINE CR1 1112 chr1 69157494 69157879 CR1-E 775 + 69157494 69157879 0 2 173,212, 0,173, +,+, 45053 LINE CR1 1113 chr1 69271450 69272426 CR1-F2 422 + 69271450 69272426 0 2 212,764, 0,212, +,+, 45094 LINE CR1 1113 chr1 69274689 69275463 CR1-C4 363 + 69274689 69275463 0 2 448,64, 0,710, +,+, 45095 LINE CR1 1113 chr1 69275144 69275400 GGLTR5B 284 - 69275144 69275400 0 2 176,55, 0,201, -,-, 45096 LTR ERVL 1113 chr1 69291309 69293081 CR1-D2 614 + 69291309 69293081 0 2 762,1010, 0,762, +,+, 45111 LINE CR1 1114 chr1 69374855 69375359 TguLTR5e 426 - 69374855 69375359 0 2 143,225, 0,279, -,-, 45158 LTR ERVL 1114 chr1 69449176 69452895 CR1-Y 314 - 69449176 69452895 0 2 1367,2123, 0,1596, -,-, 45195 LINE CR1 1115 chr1 69490726 69490779 (CTATA)n 442 + 69490726 69490779 0 2 10,9, 0,44, +,+, 45223 Simple_repeat Simple_repeat 1115 chr1 69501339 69502464 CR1-D2 484 + 69501339 69502464 0 2 657,460, 0,665, +,+, 45229 LINE CR1 1115 chr1 69519813 69521194 CR1-Y4 636 - 69519813 69521194 0 2 314,628, 0,753, -,-, 45234 LINE CR1 1115 chr1 69537274 69537840 CR1-F2 359 - 69537274 69537840 0 2 213,353, 0,213, -,-, 45252 LINE CR1 1115 chr1 69594572 69596030 CR1-F2 411 - 69594572 69596030 0 2 381,456, 0,1002, -,-, 45283 LINE CR1 1116 chr1 69616875 69617483 CR1-C4 477 - 69616875 69617483 0 2 406,157, 0,451, -,-, 45303 LINE CR1 1116 chr1 69629320 69629970 CR1-X2 269 + 69629320 69629970 0 3 289,140,221, 0,289,429, +,+,+, 45311 LINE CR1 1116 chr1 69658976 69659299 Char12Mar1_GG 630 - 69658976 69659299 0 2 212,108, 0,215, -,-, 45335 DNA hAT-Charlie 1116 chr1 69722663 69723334 CR1-Y4 548 + 69722663 69723334 0 2 568,103, 0,568, +,+, 45375 LINE CR1 1117 chr1 69828116 69828809 GGLTR5B 677 + 69828116 69828809 0 2 234,217, 0,476, +,+, 45426 LTR ERVL 1118 chr1 69863942 69864899 CR1-X2 389 - 69863942 69864899 0 2 246,277, 0,680, -,-, 45443 LINE CR1 1118 chr1 69976305 69977404 CR1-X2 577 + 69976305 69977404 0 2 414,276, 0,823, +,+, 45510 LINE CR1 1119 chr1 70028749 70028809 (TCTAT)n 398 + 70028749 70028809 0 2 9,17, 0,43, +,+, 45531 Simple_repeat Simple_repeat 1119 chr1 70043835 70043891 (TATA)n 354 + 70043835 70043891 0 2 15,10, 0,46, +,+, 45540 Simple_repeat Simple_repeat 1119 chr1 70050604 70052212 CR1-X2 421 + 70050604 70052212 0 2 128,529, 0,1079, +,+, 45544 LINE CR1 1119 chr1 70091820 70092013 Char12Mar1_GG 630 - 70091820 70092013 0 2 125,68, 0,125, -,-, 45573 DNA hAT-Charlie 1120 chr1 70204759 70205063 CR1-H 504 - 70204759 70205063 0 2 22,224, 0,80, -,-, 45652 LINE CR1 1120 chr1 70208730 70209709 CR1-E 721 - 70208730 70209709 0 2 292,136, 0,843, -,-, 45656 LINE CR1 17 chr1 70251820 70257246 CR1-Y4 577 + 70251820 70257246 0 2 1170,56, 0,5370, +,+, 45684 LINE CR1 1121 chr1 70369863 70371368 CR1-F2 561 + 70369863 70371368 0 3 246,966,293, 0,246,1212, +,+,+, 45749 LINE CR1 1122 chr1 70392805 70393784 GGLTR5B 666 + 70392805 70393784 0 2 370,155, 0,824, +,+, 45774 LTR ERVL 1122 chr1 70506057 70506784 Mariner1_GG 659 - 70506057 70506784 0 2 656,36, 0,691, -,-, 45859 DNA TcMar-Mariner 1122 chr1 70509795 70510524 CR1-F 294 + 70509795 70510524 0 2 149,580, 0,149, +,+, 45866 LINE CR1 1123 chr1 70577908 70580894 CR1-Y4 358 + 70577908 70580894 0 2 674,1333, 0,1653, +,+, 45912 LINE CR1 1123 chr1 70578582 70579588 CR1-Y 411 + 70578582 70579588 0 2 760,246, 0,760, +,+, 45913 LINE CR1 1124 chr1 70658421 70659726 CR1-F2 552 - 70658421 70659726 0 2 737,233, 0,1072, -,-, 45948 LINE CR1 1124 chr1 70661898 70662153 CR1-C 769 - 70661898 70662153 0 2 130,61, 0,194, -,-, 45951 LINE CR1 1124 chr1 70665481 70668473 CR1-C4 457 + 70665481 70668473 0 3 1705,422,862, 0,1708,2130, +,+,+, 45953 LINE CR1 1124 chr1 70689769 70690676 CR1-C 785 + 70689769 70690676 0 2 619,174, 0,733, +,+, 45964 LINE CR1 1124 chr1 70733428 70734108 CR1-Y2_Aves 66 - 70733428 70734108 0 2 304,351, 0,329, -,-, 45988 LINE CR1 1124 chr1 70751579 70751984 CR1-Y3 685 - 70751579 70751984 0 2 286,119, 0,286, -,-, 45998 LINE CR1 1125 chr1 70908147 70908700 REP131 364 - 70908147 70908700 0 2 75,76, 0,477, -,-, 46087 DNA? DNA? 1126 chr1 70947679 70952220 CR1-F 928 + 70947679 70952220 0 2 831,3677, 0,864, +,+, 46118 LINE CR1 1127 chr1 71046024 71046582 Char12Mar1_GG 556 - 71046024 71046582 0 2 468,61, 0,497, -,-, 46189 DNA hAT-Charlie 1127 chr1 71060421 71062185 CR1-Y2_Aves 375 + 71060421 71062185 0 2 1115,113, 0,1651, +,+, 46195 LINE CR1 1127 chr1 71078162 71085276 Charlie12_GG 371 - 71078162 71085276 0 2 1227,152, 0,6962, -,-, 46209 DNA hAT-Charlie 1127 chr1 71103161 71103556 CR1-D2 599 - 71103161 71103556 0 2 187,155, 0,240, -,-, 46220 LINE CR1 1127 chr1 71105235 71106171 CR1-C4 591 - 71105235 71106171 0 2 833,101, 0,835, -,-, 46223 LINE CR1 1127 chr1 71128292 71129037 CR1-C2 185 + 71128292 71129037 0 2 195,550, 0,195, +,+, 46234 LINE CR1 1127 chr1 71139539 71139994 UCON64 302 + 71139539 71139994 0 2 310,73, 0,382, +,+, 46241 Unknown Unknown 1127 chr1 71140986 71141653 Char12Mar1_GG 714 - 71140986 71141653 0 2 172,300, 0,367, -,-, 46243 DNA hAT-Charlie 1129 chr1 71341649 71342690 Char12Mar1_GG 642 - 71341649 71342690 0 2 440,140, 0,901, -,-, 46360 DNA hAT-Charlie 1129 chr1 71402836 71404256 Char12Mar1_GG 585 - 71402836 71404256 0 2 125,413, 0,1007, -,-, 46397 DNA hAT-Charlie 1129 chr1 71418872 71419438 GGLTR11-int 435 + 71418872 71419438 0 2 124,153, 0,413, +,+, 46407 LTR ERV1 1129 chr1 71432832 71433477 GGLTR12C 362 - 71432832 71433477 0 2 201,96, 0,549, -,-, 46414 LTR ERVL 1130 chr1 71437054 71437558 CR1-F2 185 - 71437054 71437558 0 2 187,317, 0,187, -,-, 46421 LINE CR1 1130 chr1 71453588 71458846 GGERVL18-int 525 + 71453588 71458846 0 2 1874,1516, 0,3742, +,+, 46424 LTR ERVL 1130 chr1 71459586 71465511 GGERVL18-int 450 + 71459586 71465511 0 3 432,1596,188, 0,4137,5737, +,+,+, 46429 LTR ERVL 1130 chr1 71460016 71463725 CR1-F 910 + 71460016 71463725 0 2 1610,2099, 0,1610, +,+, 46430 LINE CR1 1130 chr1 71496249 71497168 CR1-Y2_Aves 229 + 71496249 71497168 0 2 781,116, 0,803, +,+, 46448 LINE CR1 1130 chr1 71500000 71501313 Char12Mar1_GG 365 - 71500000 71501313 0 4 392,157,92,356, 0,430,839,957, -,-,-,-, 46452 DNA hAT-Charlie 1130 chr1 71500582 71500843 CR1-E 763 + 71500582 71500843 0 2 62,199, 0,62, +,+, 46454 LINE CR1 1130 chr1 71529876 71532618 Char12Mar1_GG 698 - 71529876 71532618 0 2 238,450, 0,2292, -,-, 46478 DNA hAT-Charlie 1130 chr1 71530111 71532170 CR1-D 680 + 71530111 71532170 0 3 343,875,145, 0,1038,1914, +,+,+, 46479 LINE CR1 1131 chr1 71579387 71579897 CR1-D2 612 + 71579387 71579897 0 2 189,321, 0,189, +,+, 46508 LINE CR1 1131 chr1 71630859 71631079 CR1-X2 626 + 71630859 71631079 0 2 156,64, 0,156, +,+, 46538 LINE CR1 1131 chr1 71664092 71664807 CR1-Y2_Aves 295 + 71664092 71664807 0 2 503,201, 0,514, +,+, 46551 LINE CR1 1131 chr1 71680864 71681194 CR1-D2 639 + 71680864 71681194 0 2 124,121, 0,209, +,+, 46562 LINE CR1 1132 chr1 71699386 71700002 CR1-X2 277 - 71699386 71700002 0 2 363,253, 0,363, -,-, 46583 LINE CR1 1132 chr1 71704902 71706919 GGLTR7-int 338 - 71704902 71706919 0 3 166,742,194, 0,647,1823, -,-,-, 46588 LTR ERV1 1132 chr1 71708508 71709841 GGLTR5B 776 - 71708508 71709841 0 2 52,304, 0,1029, -,-, 46589 LTR ERVL 1132 chr1 71719201 71720113 CR1-Y1_Aves 569 - 71719201 71720113 0 2 125,44, 0,868, -,-, 46598 LINE CR1 1132 chr1 71736108 71737425 CR1-F2 633 + 71736108 71737425 0 3 196,528,100, 0,261,1217, +,+,+, 46605 LINE CR1 1132 chr1 71815329 71818422 CR1-C3 647 - 71815329 71818422 0 2 226,2867, 0,226, -,-, 46655 LINE CR1 141 chr1 71826282 71827827 GGERVL-A-int 189 - 71826282 71827827 0 3 238,277,236, 0,504,1309, -,-,-, 46661 LTR ERVL 1133 chr1 71841371 71841774 CR1-D2 642 + 71841371 71841774 0 2 84,316, 0,87, +,+, 46670 LINE CR1 1134 chr1 72079266 72080216 CR1-Y 726 + 72079266 72080216 0 2 203,537, 0,413, +,+, 46788 LINE CR1 1134 chr1 72086041 72089546 CR1-C4 545 + 72086041 72089546 0 2 510,335, 0,3170, +,+, 46795 LINE CR1 1135 chr1 72134154 72136148 CR1-C4 574 + 72134154 72136148 0 3 234,409,1329, 0,234,665, +,+,+, 46831 LINE CR1 1135 chr1 72169794 72171434 Char12Mar1_GG 509 - 72169794 72171434 0 2 972,306, 0,1334, -,-, 46853 DNA hAT-Charlie 1135 chr1 72173638 72179446 GGLTR3F1 902 + 72173638 72179446 0 2 494,5313, 0,495, +,+, 46858 LTR ERVL 1135 chr1 72179446 72179974 GGLTR3F1 934 + 72179446 72179974 0 2 36,492, 0,36, +,+, 46859 LTR ERVL 1135 chr1 72203032 72203224 UCON78 206 + 72203032 72203224 0 2 108,47, 0,145, +,+, 46888 DNA DNA 1136 chr1 72235085 72235408 CR1-Y4 599 - 72235085 72235408 0 2 192,131, 0,192, -,-, 46910 LINE CR1 1136 chr1 72240255 72240606 (CTTCC)n 620 + 72240255 72240606 0 2 92,23, 0,328, +,+, 46914 Simple_repeat Simple_repeat 1136 chr1 72288414 72288833 GGLTR8B 557 + 72288414 72288833 0 2 182,229, 0,190, +,+, 46946 LTR ERVL 1136 chr1 72289028 72293552 CR1-H2 411 - 72289028 72293552 0 3 71,1639,283, 0,2579,4241, -,-,-, 46947 LINE CR1 1136 chr1 72324897 72328583 CR1-F2 378 + 72324897 72328583 0 2 132,414, 0,3272, +,+, 46975 LINE CR1 1136 chr1 72333366 72334626 (CCCTAA)n 739 + 72333366 72334626 0 2 180,1067, 0,193, +,+, 46981 Simple_repeat Simple_repeat 1136 chr1 72339818 72340760 ENS1B-LTR 490 + 72339818 72340760 0 2 125,452, 0,490, +,+, 46988 LTR ERVL 1137 chr1 72374386 72375805 CR1-Y2_Aves 175 + 72374386 72375805 0 3 350,119,485, 0,799,934, +,+,+, 47019 LINE CR1 1137 chr1 72437928 72438649 CR1-C3 698 - 72437928 72438649 0 2 229,492, 0,229, -,-, 47058 LINE CR1 1137 chr1 72441496 72441892 Mariner1b_GG 519 - 72441496 72441892 0 2 272,106, 0,290, -,-, 47061 DNA TcMar-Mariner 1137 chr1 72456339 72457061 CR1-C3 693 - 72456339 72457061 0 2 229,493, 0,229, -,-, 47071 LINE CR1 1137 chr1 72459909 72460306 Mariner1b_GG 515 - 72459909 72460306 0 2 273,106, 0,291, -,-, 47073 DNA TcMar-Mariner 1137 chr1 72474029 72475149 CR1-F2 486 - 72474029 72475149 0 2 572,543, 0,577, -,-, 47080 LINE CR1 1138 chr1 72573957 72586843 Char12Mar1_GG 755 - 72573957 72586843 0 3 28,31,164, 0,12272,12722, -,-,-, 47149 DNA hAT-Charlie 1139 chr1 72632151 72632565 CR1-Y4 712 + 72632151 72632565 0 2 289,84, 0,330, +,+, 47196 LINE CR1 1139 chr1 72668933 72670722 CR1-X2 516 + 72668933 72670722 0 2 1434,355, 0,1434, +,+, 47229 LINE CR1 1139 chr1 72671223 72673577 Char12Mar1_GG 443 - 72671223 72673577 0 2 587,949, 0,1405, -,-, 47230 DNA hAT-Charlie 1139 chr1 72683947 72684556 CR1-Y2_Aves 147 - 72683947 72684556 0 2 230,147, 0,462, -,-, 47240 LINE CR1 1139 chr1 72690051 72694820 GGERVL-A-int 306 + 72690051 72694820 0 4 161,160,322,95, 0,1523,1951,4674, +,+,+,+, 47245 LTR ERVL 1139 chr1 72714370 72719397 GGERVL18-int 729 - 72714370 72719397 0 4 266,2640,1778,343, 0,266,2906,4684, -,-,-,-, 47267 LTR ERVL 1139 chr1 72736428 72737099 GGLTR8B 626 - 72736428 72737099 0 2 147,523, 0,148, -,-, 47278 LTR ERVL 1140 chr1 72756305 72756823 GGERVL-C-int 661 - 72756305 72756823 0 2 467,51, 0,467, -,-, 47286 LTR ERVL 1140 chr1 72784389 72787860 Char12Mar1_GG 706 - 72784389 72787860 0 2 46,520, 0,2951, -,-, 47302 DNA hAT-Charlie 1140 chr1 72802215 72802244 A-rich 607 + 72802215 72802244 0 2 28,1, 0,28, +,+, 47313 Low_complexity Low_complexity 1140 chr1 72804492 72806881 GGLTR5B 638 - 72804492 72806881 0 2 110,443, 0,1946, -,-, 47318 LTR ERVL 1140 chr1 72804590 72806436 CR1-C3 612 - 72804590 72806436 0 2 415,706, 0,1140, -,-, 47319 LINE CR1 1140 chr1 72817916 72818224 CR1-Y 506 + 72817916 72818224 0 2 179,129, 0,179, +,+, 47331 LINE CR1 1140 chr1 72825730 72826202 TguLTR5e 332 - 72825730 72826202 0 2 138,221, 0,251, -,-, 47337 LTR ERVL 1141 chr1 72895677 72895754 (TTTTTG)n 344 + 72895677 72895754 0 2 30,15, 0,62, +,+, 47385 Simple_repeat Simple_repeat 1141 chr1 72913516 72914419 GGLTR5A 335 + 72913516 72914419 0 3 370,88,86, 0,695,817, +,+,+, 47398 LTR ERVL 1141 chr1 72930093 72931862 CR1-Y2_Aves 353 - 72930093 72931862 0 2 211,1224, 0,545, -,-, 47411 LINE CR1 1141 chr1 72937083 72940305 CR1-D 656 + 72937083 72940305 0 3 942,1660,125, 0,995,3097, +,+,+, 47415 LINE CR1 1141 chr1 72940443 72947456 CR1-C4 518 - 72940443 72947456 0 2 168,1086, 0,5927, -,-, 47419 LINE CR1 1141 chr1 72943007 72945550 GGERVL-B-int 389 - 72943007 72945550 0 3 20,410,1446, 0,656,1097, -,-,-, 47424 LTR ERVL 1141 chr1 72943201 72943661 GGLTR3C1 441 + 72943201 72943661 0 3 176,124,111, 0,197,349, +,+,+, 47426 LTR ERVL 1141 chr1 72967779 72968463 CR1-C4 542 + 72967779 72968463 0 2 426,207, 0,477, +,+, 47440 LINE CR1 1142 chr1 73031357 73031926 GGLTR7-int 339 - 73031357 73031926 0 2 60,242, 0,327, -,-, 47482 LTR ERV1 1142 chr1 73096706 73097542 CR1-E 653 - 73096706 73097542 0 2 281,540, 0,296, -,-, 47526 LINE CR1 1142 chr1 73097675 73099243 GGERVL-B-int 652 - 73097675 73099243 0 2 140,1081, 0,487, -,-, 47528 LTR ERVL 1142 chr1 73099239 73104248 CR1-X2 438 - 73099239 73104248 0 3 522,254,2233, 0,1210,2776, -,-,-, 47530 LINE CR1 1143 chr1 73143805 73143908 (T)n 868 + 73143805 73143908 0 2 17,25, 0,78, +,+, 47564 Simple_repeat Simple_repeat 1143 chr1 73163561 73164311 Char12Mar1_GG 658 - 73163561 73164311 0 2 380,182, 0,568, -,-, 47577 DNA hAT-Charlie 1143 chr1 73179058 73183110 CR1-C2 732 - 73179058 73183110 0 2 1050,1230, 0,2822, -,-, 47587 LINE CR1 1143 chr1 73183750 73183832 (TTATCT)n 354 + 73183750 73183832 0 2 27,25, 0,57, +,+, 47591 Simple_repeat Simple_repeat 1143 chr1 73215156 73216048 CR1-F2 490 - 73215156 73216048 0 2 148,87, 0,805, -,-, 47616 LINE CR1 1143 chr1 73215304 73215961 ENS1B-LTR 844 + 73215304 73215961 0 2 371,284, 0,373, +,+, 47617 LTR ERVL 1143 chr1 73223689 73226285 CR1-X 439 - 73223689 73226285 0 2 1789,791, 0,1805, -,-, 47623 LINE CR1 1143 chr1 73226314 73227598 CR1-B 349 - 73226314 73227598 0 3 105,95,225, 0,624,1059, -,-,-, 47624 LINE CR1 1143 chr1 73233120 73243468 Char12Mar1_GG 663 - 73233120 73243468 0 2 535,195, 0,10153, -,-, 47630 DNA hAT-Charlie 1143 chr1 73246947 73258576 REP131 118 - 73246947 73258576 0 2 124,211, 0,11418, -,-, 47641 DNA? DNA? 1144 chr1 73284126 73284218 A-rich 572 + 73284126 73284218 0 2 41,40, 0,52, +,+, 47659 Low_complexity Low_complexity 1144 chr1 73296790 73302882 Charlie12_GG 507 - 73296790 73302882 0 3 237,158,368, 0,5541,5724, -,-,-, 47671 DNA hAT-Charlie 1144 chr1 73297060 73302332 CR1-X 497 - 73297060 73302332 0 2 1027,800, 0,4472, -,-, 47672 LINE CR1 1144 chr1 73298094 73301538 CR1-G 807 + 73298094 73301538 0 2 197,3247, 0,197, +,+, 47673 LINE CR1 1144 chr1 73307360 73309221 CR1-F 670 + 73307360 73309221 0 2 1833,28, 0,1833, +,+, 47681 LINE CR1 1144 chr1 73332757 73335668 CR1-F2 422 + 73332757 73335668 0 3 1647,388,876, 0,1647,2035, +,+,+, 47700 LINE CR1 1144 chr1 73340807 73341857 CR1-H 702 + 73340807 73341857 0 2 591,180, 0,870, +,+, 47706 LINE CR1 1144 chr1 73354082 73354413 CR1-Y4 365 + 73354082 73354413 0 2 136,158, 0,173, +,+, 47714 LINE CR1 1144 chr1 73354218 73354770 CR1-Y1_Aves 341 + 73354218 73354770 0 2 42,361, 0,191, +,+, 47715 LINE CR1 1144 chr1 73375308 73377426 CR1-G 783 - 73375308 73377426 0 2 1281,253, 0,1865, -,-, 47731 LINE CR1 1145 chr1 73402417 73402781 Char12Mar1_GG 484 - 73402417 73402781 0 2 83,242, 0,122, -,-, 47751 DNA hAT-Charlie 1145 chr1 73410567 73411955 CR1-C4 583 - 73410567 73411955 0 2 968,420, 0,968, -,-, 47756 LINE CR1 1145 chr1 73419669 73423634 GGERVL18-int 536 + 73419669 73423634 0 2 831,3134, 0,831, +,+, 47760 LTR ERVL 1145 chr1 73445591 73446411 CR1-C4 542 - 73445591 73446411 0 3 86,342,201, 0,277,619, -,-,-, 47769 LINE CR1 1145 chr1 73450278 73451379 CR1-F 532 - 73450278 73451379 0 2 59,255, 0,846, -,-, 47776 LINE CR1 1145 chr1 73464359 73464891 CR1-F2 313 + 73464359 73464891 0 2 371,161, 0,371, +,+, 47788 LINE CR1 1145 chr1 73477374 73479444 CR1-D2 517 + 73477374 73479444 0 3 276,950,195, 0,830,1875, +,+,+, 47798 LINE CR1 1145 chr1 73482478 73483185 CR1-C4 601 - 73482478 73483185 0 2 57,213, 0,494, -,-, 47805 LINE CR1 1145 chr1 73483398 73483713 CR1-E 681 + 73483398 73483713 0 2 208,107, 0,208, +,+, 47808 LINE CR1 1145 chr1 73488175 73491019 CR1-F 417 - 73488175 73491019 0 3 1290,1243,275, 0,1316,2569, -,-,-, 47812 LINE CR1 1145 chr1 73498682 73499201 CR1-Y2_Aves 243 - 73498682 73499201 0 2 373,106, 0,413, -,-, 47823 LINE CR1 1145 chr1 73500534 73500861 GGERV10_LTR 768 - 73500534 73500861 0 2 158,63, 0,264, -,-, 47825 LTR ERVL 1145 chr1 73520197 73522952 GGLTR11-int 381 + 73520197 73522952 0 3 108,1585,201, 0,649,2554, +,+,+, 47841 LTR ERV1 1145 chr1 73528383 73530790 GGERV20_I-int 294 - 73528383 73530790 0 2 388,1965, 0,442, -,-, 47849 LTR ERVL 143 chr1 73530776 73534261 CR1-Y4 467 + 73530776 73534261 0 2 105,444, 0,3041, +,+, 47850 LINE CR1 1146 chr1 73534215 73537996 GGERVL18-int 390 - 73534215 73537996 0 3 268,1692,1816, 0,271,1965, -,-,-, 47852 LTR ERVL 1146 chr1 73545969 73546508 CR1-Y2_Aves 239 - 73545969 73546508 0 2 373,126, 0,413, -,-, 47859 LINE CR1 1146 chr1 73547818 73553872 GGERV10_LTR 776 - 73547818 73553872 0 5 158,62,5399,158,63, 0,264,326,5726,5991, -,-,-,-,-, 47861 LTR ERVL 1146 chr1 73564395 73566037 CR1-X2 502 - 73564395 73566037 0 2 859,783, 0,859, -,-, 47874 LINE CR1 1146 chr1 73573969 73583517 GGERV20_I-int 309 - 73573969 73583517 0 2 2108,1475, 0,8073, -,-, 47883 LTR ERVL 1146 chr1 73576069 73582045 CR1-H 691 + 73576069 73582045 0 3 174,1943,1088, 0,189,4888, +,+,+, 47884 LINE CR1 1146 chr1 73599828 73609448 GGERVL18-int 286 - 73599828 73609448 0 4 298,1173,164,148, 0,5330,9306,9472, -,-,-,-, 47897 LTR ERVL 1146 chr1 73600136 73605110 GGLTR7A 802 + 73600136 73605110 0 2 589,4385, 0,589, +,+, 47898 LTR ERV1 1146 chr1 73615179 73615846 GGLTR5B 635 - 73615179 73615846 0 2 84,329, 0,338, -,-, 47907 LTR ERVL 1146 chr1 73628238 73629028 GGERVL-B-int 371 - 73628238 73629028 0 2 71,715, 0,75, -,-, 47917 LTR ERVL 1147 chr1 73666389 73667683 CR1-F0 502 - 73666389 73667683 0 2 235,1055, 0,239, -,-, 47949 LINE CR1 1147 chr1 73671243 73671840 CR1-X2 673 - 73671243 73671840 0 2 241,335, 0,262, -,-, 47955 LINE CR1 1147 chr1 73679263 73679728 Char12Mar1_GG 479 - 73679263 73679728 0 2 321,128, 0,337, -,-, 47966 DNA hAT-Charlie 1147 chr1 73691075 73695264 GGERV28_I-int 187 + 73691075 73695264 0 3 64,1444,1995, 0,435,2194, +,+,+, 47973 LTR ERVK 1147 chr1 73695502 73696346 GGLTR7-int 792 + 73695502 73696346 0 3 212,260,350, 0,234,494, +,+,+, 47974 LTR ERV1 1147 chr1 73700853 73704473 CR1-Y4 588 + 73700853 73704473 0 2 557,2576, 0,1044, +,+, 47977 LINE CR1 1147 chr1 73706049 73707663 GGERV20_I-int 606 + 73706049 73707663 0 5 554,254,101,376,316, 0,557,811,922,1298, +,+,+,+,+, 47979 LTR ERVL 1147 chr1 73709359 73710980 CR1-E 672 + 73709359 73710980 0 2 908,713, 0,908, +,+, 47982 LINE CR1 1147 chr1 73715669 73717692 CR1-F2 824 - 73715669 73717692 0 2 659,175, 0,1848, -,-, 47987 LINE CR1 1147 chr1 73742071 73744317 GGLTR7-int 302 - 73742071 73744317 0 3 526,948,599, 0,624,1647, -,-,-, 48015 LTR ERV1 1147 chr1 73747591 73748034 GGLTR5B 536 - 73747591 73748034 0 2 142,255, 0,188, -,-, 48018 LTR ERVL 1147 chr1 73751328 73752867 CR1-C4 611 + 73751328 73752867 0 2 119,626, 0,913, +,+, 48024 LINE CR1 1147 chr1 73765926 73771457 GGERVL18-int 658 + 73765926 73771457 0 2 93,925, 0,4606, +,+, 48032 LTR ERVL 1147 chr1 73767406 73770530 GGERVL18-int 623 - 73767406 73770530 0 3 339,1377,1390, 0,357,1734, -,-,-, 48035 LTR ERVL 1147 chr1 73771782 73772102 GGERV10_LTR 772 - 73771782 73772102 0 2 147,62, 0,258, -,-, 48037 LTR ERVL 1147 chr1 73772103 73774114 GGERVL18-LTR 568 - 73772103 73774114 0 2 171,326, 0,1685, -,-, 48038 LTR ERVL 1147 chr1 73772424 73772632 GGLTR4B 613 - 73772424 73772632 0 2 114,87, 0,121, -,-, 48039 LTR ERVL 1147 chr1 73777343 73783145 GGERV10_LTR 654 - 73777343 73783145 0 4 88,5369,159,93, 0,88,5458,5709, -,-,-,-, 48044 LTR ERVL 1147 chr1 73784515 73791132 GGERVL18-int 650 - 73784515 73791132 0 4 187,182,1622,2961, 0,1846,2028,3656, -,-,-,-, 48045 LTR ERVL 1148 chr1 73798099 73803094 GGERVL-B-int 606 - 73798099 73803094 0 5 570,193,3246,358,596, 0,570,763,4041,4399, -,-,-,-,-, 48052 LTR ERVL 1148 chr1 73815617 73818153 CR1-X2 435 + 73815617 73818153 0 3 375,626,544, 0,668,1992, +,+,+, 48069 LINE CR1 1148 chr1 73822062 73826198 CR1-Y4 526 + 73822062 73826198 0 2 585,1188, 0,2948, +,+, 48075 LINE CR1 1148 chr1 73828278 73830718 GGLTR7-int 389 + 73828278 73830718 0 3 440,1523,105, 0,535,2335, +,+,+, 48078 LTR ERV1 1148 chr1 73855868 73858631 GGERVL-A-int 273 + 73855868 73858631 0 3 243,118,70, 0,2321,2693, +,+,+, 48101 LTR ERVL 1148 chr1 73868550 73869180 CR1-C4 614 + 73868550 73869180 0 2 276,353, 0,277, +,+, 48108 LINE CR1 1148 chr1 73884305 73892291 GGERVL18-int 359 - 73884305 73892291 0 3 1130,958,36, 0,6951,7950, -,-,-, 48119 LTR ERVL 1148 chr1 73885435 73891256 GGERV10_LTR 963 + 73885435 73891256 0 3 220,5380,220, 0,221,5601, +,+,+, 48120 LTR ERVL 1148 chr1 73897120 73911938 GGERVL-C-int 336 - 73897120 73911938 0 2 359,2704, 0,12114, -,-, 48129 LTR ERVL 1148 chr1 73899657 73900756 GGLTR7B 394 + 73899657 73900756 0 2 189,125, 0,974, +,+, 48132 LTR ERV1 1148 chr1 73900756 73903233 CR1-C 859 + 73900756 73903233 0 2 1466,1010, 0,1467, +,+, 48134 LINE CR1 1148 chr1 73903227 73909232 GGERVL18-int 589 - 73903227 73909232 0 4 83,2660,2538,336, 0,85,3103,5669, -,-,-,-, 48135 LTR ERVL 1148 chr1 73912030 73913205 GGERVL-C-int 189 - 73912030 73913205 0 2 133,243, 0,932, -,-, 48137 LTR ERVL 1148 chr1 73921829 73923596 GGERVL18-int 605 - 73921829 73923596 0 2 83,1682, 0,85, -,-, 48149 LTR ERVL 1149 chr1 73938047 73939793 CR1-D 527 + 73938047 73939793 0 2 210,1345, 0,401, +,+, 48165 LINE CR1 1149 chr1 73951800 73954204 CR1-E 307 + 73951800 73954204 0 2 646,170, 0,2234, +,+, 48182 LINE CR1 1149 chr1 73953035 73954034 ENS1B-LTR 518 + 73953035 73954034 0 2 128,456, 0,543, +,+, 48184 LTR ERVL 1149 chr1 73954445 73956265 GGERVL-A-int 261 + 73954445 73956265 0 3 204,183,952, 0,564,868, +,+,+, 48186 LTR ERVL 1149 chr1 73969391 73971137 GGLTR3C2 634 - 73969391 73971137 0 2 438,115, 0,1631, -,-, 48206 LTR ERVL 1149 chr1 73986744 73987030 Mariner1b_GG 620 - 73986744 73987030 0 2 218,68, 0,218, -,-, 48224 DNA TcMar-Mariner 1149 chr1 73988270 73990393 CR1-Y4 473 - 73988270 73990393 0 3 318,692,1111, 0,320,1012, -,-,-, 48225 LINE CR1 1149 chr1 73990752 73991445 CR1-E 102 - 73990752 73991445 0 2 290,214, 0,479, -,-, 48227 LINE CR1 1149 chr1 73993207 73994040 CR1-C3 420 + 73993207 73994040 0 2 247,359, 0,474, +,+, 48230 LINE CR1 1149 chr1 73996953 73999170 GGERVL-B-int 328 - 73996953 73999170 0 2 352,1865, 0,352, -,-, 48238 LTR ERVL 1149 chr1 73999299 73999916 GGERVL-A-int 377 - 73999299 73999916 0 2 183,74, 0,543, -,-, 48239 LTR ERVL 1149 chr1 74035967 74037493 GGERVL-A-int 173 + 74035967 74037493 0 3 223,369,208, 0,676,1318, +,+,+, 48263 LTR ERVL 1149 chr1 74037622 74039838 GGERVL-B-int 334 + 74037622 74039838 0 2 1867,349, 0,1867, +,+, 48264 LTR ERVL 1149 chr1 74041162 74043442 CR1-C4 403 - 74041162 74043442 0 3 146,359,252, 0,1587,2028, -,-,-, 48268 LINE CR1 1150 chr1 74067106 74067885 Mariner1b_GG 378 - 74067106 74067885 0 2 420,63, 0,716, -,-, 48284 DNA TcMar-Mariner 1150 chr1 74069365 74071956 CR1-C4 592 + 74069365 74071956 0 2 1852,148, 0,2443, +,+, 48286 LINE CR1 1150 chr1 74085794 74086172 GGLTR4A 400 + 74085794 74086172 0 2 240,103, 0,275, +,+, 48300 LTR ERVL 1150 chr1 74088918 74092754 CR1-F 398 - 74088918 74092754 0 2 3111,671, 0,3165, -,-, 48303 LINE CR1 1150 chr1 74097515 74099306 CR1-D 668 - 74097515 74099306 0 2 95,291, 0,1500, -,-, 48309 LINE CR1 1150 chr1 74124668 74127522 CR1-F2 369 + 74124668 74127522 0 2 1823,1031, 0,1823, +,+, 48335 LINE CR1 1150 chr1 74137508 74139388 CR1-E 566 + 74137508 74139388 0 2 203,1665, 0,215, +,+, 48344 LINE CR1 1150 chr1 74141140 74143402 GGLTR7-int 194 + 74141140 74143402 0 2 218,381, 0,1881, +,+, 48347 LTR ERV1 1150 chr1 74165047 74165464 GGLTR3C1 177 - 74165047 74165464 0 2 120,212, 0,205, -,-, 48370 LTR ERVL 1150 chr1 74165515 74174954 GGERVL18-int 539 - 74165515 74174954 0 4 311,683,396,1869, 0,311,995,7570, -,-,-,-, 48372 LTR ERVL 1150 chr1 74166906 74173085 GGERVK1-int 981 + 74166906 74173085 0 4 241,5258,439,241, 0,241,5499,5938, +,+,+,+, 48373 LTR ERVK 1150 chr1 74179778 74180913 CR1-H 708 + 74179778 74180913 0 2 279,379, 0,756, +,+, 48379 LINE CR1 1151 chr1 74186910 74189856 CR1-X2 453 - 74186910 74189856 0 3 214,127,108, 0,231,2838, -,-,-, 48385 LINE CR1 1151 chr1 74187570 74189751 CR1-F 393 - 74187570 74189751 0 2 324,246, 0,1935, -,-, 48387 LINE CR1 1151 chr1 74208069 74208517 CR1-Y4 560 + 74208069 74208517 0 2 354,94, 0,354, +,+, 48406 LINE CR1 1151 chr1 74210052 74211656 CR1-H 769 + 74210052 74211656 0 2 793,811, 0,793, +,+, 48410 LINE CR1 1151 chr1 74234345 74234676 GGERV10_LTR 581 + 74234345 74234676 0 2 82,161, 0,170, +,+, 48428 LTR ERVL 1151 chr1 74234812 74240329 GGERV10_LTR 583 + 74234812 74240329 0 3 5184,88,160, 0,5184,5357, +,+,+, 48429 LTR ERVL 1151 chr1 74241909 74242810 CR1-Y 386 - 74241909 74242810 0 2 498,126, 0,775, -,-, 48433 LINE CR1 1151 chr1 74242849 74243890 CR1-X2 611 + 74242849 74243890 0 2 53,988, 0,53, +,+, 48435 LINE CR1 1151 chr1 74261963 74264681 CR1-C 567 + 74261963 74264681 0 2 485,1752, 0,966, +,+, 48444 LINE CR1 1151 chr1 74266957 74270368 GGERV20_I-int 293 + 74266957 74270368 0 2 387,2883, 0,528, +,+, 48450 LTR ERVL 1151 chr1 74301617 74302173 GGLTR5A 342 + 74301617 74302173 0 2 272,203, 0,353, +,+, 48469 LTR ERVL 1151 chr1 74303895 74305745 GGLTR7-int 309 + 74303895 74305745 0 4 100,271,271,157, 0,125,1114,1693, +,+,+,+, 48472 LTR ERV1 1151 chr1 74305929 74309397 GGLTR7-int 438 + 74305929 74309397 0 4 190,1005,1510,95, 0,491,1591,3373, +,+,+,+, 48474 LTR ERV1 1151 chr1 74315714 74316093 CR1-F2 491 - 74315714 74316093 0 2 164,215, 0,164, -,-, 48484 LINE CR1 1152 chr1 74349623 74351037 CR1-C3 504 - 74349623 74351037 0 2 968,328, 0,1086, -,-, 48504 LINE CR1 1152 chr1 74361739 74362940 GGERVL-C-int 682 + 74361739 74362940 0 2 769,429, 0,772, +,+, 48513 LTR ERVL 1152 chr1 74370640 74371211 CR1-Y2 743 - 74370640 74371211 0 2 485,51, 0,520, -,-, 48520 LINE CR1 1152 chr1 74377749 74379218 Char12Mar1_GG 540 + 74377749 74379218 0 2 383,1057, 0,412, +,+, 48526 DNA hAT-Charlie 1152 chr1 74396672 74399246 GGERV20_I-int 257 + 74396672 74399246 0 3 84,755,1496, 0,258,1078, +,+,+, 48537 LTR ERVL 1152 chr1 74400233 74401304 GGERVL18-int 469 + 74400233 74401304 0 2 329,741, 0,330, +,+, 48539 LTR ERVL 1152 chr1 74418310 74423715 GGERVL-C-int 307 - 74418310 74423715 0 3 278,181,4946, 0,278,459, -,-,-, 48555 LTR ERVL 1152 chr1 74426318 74426571 GGLTR5B 581 + 74426318 74426571 0 2 40,197, 0,56, +,+, 48557 LTR ERVL 1153 chr1 74473374 74476271 GGERVL-A-int 476 - 74473374 74476271 0 2 860,2020, 0,877, -,-, 48602 LTR ERVL 1153 chr1 74477630 74482629 GGERV10_LTR 581 + 74477630 74482629 0 3 4658,88,162, 0,4658,4837, +,+,+, 48604 LTR ERVL 1153 chr1 74482695 74485925 GGERVL18-LTR 576 - 74482695 74485925 0 3 123,2761,341, 0,127,2889, -,-,-, 48605 LTR ERVL 1153 chr1 74487302 74488910 GGLTR6 663 + 74487302 74488910 0 3 64,84,282, 0,697,1326, +,+,+, 48607 LTR ERVL 1153 chr1 74489395 74490097 CR1-F2 648 - 74489395 74490097 0 2 641,61, 0,641, -,-, 48611 LINE CR1 1153 chr1 74493781 74496202 CR1-B2 841 + 74493781 74496202 0 2 502,314, 0,2107, +,+, 48617 LINE CR1 1153 chr1 74498011 74498726 GGLTR3G1 743 - 74498011 74498726 0 2 280,250, 0,465, -,-, 48621 LTR ERVL 1153 chr1 74506471 74506780 CR1-C4 310 + 74506471 74506780 0 2 58,187, 0,122, +,+, 48627 LINE CR1 1153 chr1 74507044 74507593 CR1-H2 785 + 74507044 74507593 0 2 519,30, 0,519, +,+, 48628 LINE CR1 1154 chr1 74581035 74582990 CR1-D 561 + 74581035 74582990 0 2 450,1505, 0,450, +,+, 48662 LINE CR1 1154 chr1 74598900 74599791 GGERVL-B-int 736 - 74598900 74599791 0 2 560,331, 0,560, -,-, 48679 LTR ERVL 1154 chr1 74600151 74603473 GGERVL-A-int 431 - 74600151 74603473 0 3 1593,1508,132, 0,1593,3190, -,-,-, 48682 LTR ERVL 1154 chr1 74603523 74603765 GGLTR3C2 650 - 74603523 74603765 0 2 156,86, 0,156, -,-, 48684 LTR ERVL 1154 chr1 74603915 74604483 GGLTR11 613 - 74603915 74604483 0 2 467,62, 0,506, -,-, 48686 LTR ERV1 1154 chr1 74626455 74626884 Sat-CR1_GG 58 + 74626455 74626884 0 2 41,256, 0,173, +,+, 48703 Satellite Satellite 1158 chr1 75137262 75137757 GGXHOI 347 + 75137262 75137757 0 2 193,247, 0,248, +,+, 48715 Satellite W-chromosome 1158 chr1 75138975 75139592 Sat-CR1_GG 152 + 75138975 75139592 0 2 50,382, 0,235, +,+, 48718 Satellite Satellite 1158 chr1 75151527 75153830 GGERV28_I-int 154 - 75151527 75153830 0 2 347,434, 0,1869, -,-, 48730 LTR ERVK 1158 chr1 75162022 75163052 CR1-Y1_Aves 462 - 75162022 75163052 0 2 737,77, 0,953, -,-, 48743 LINE CR1 1158 chr1 75188863 75191964 CR1-Y1_Aves 408 - 75188863 75191964 0 2 793,219, 0,2882, -,-, 48776 LINE CR1 1158 chr1 75229587 75232198 GGLTR3C2 410 - 75229587 75232198 0 2 2071,540, 0,2071, -,-, 48811 LTR ERVL 144 chr1 75232713 75236051 CR1-E 95 + 75232713 75236051 0 4 261,217,2298,316, 0,273,510,3022, +,+,+,+, 48813 LINE CR1 1159 chr1 75243752 75244293 GGLTR5B 190 + 75243752 75244293 0 2 299,211, 0,330, +,+, 48821 LTR ERVL 1159 chr1 75257360 75258121 CR1-Y3 653 - 75257360 75258121 0 2 481,212, 0,549, -,-, 48835 LINE CR1 1159 chr1 75258951 75259774 GGLTR10C1 646 + 75258951 75259774 0 2 364,459, 0,364, +,+, 48836 LTR ERVK 1159 chr1 75284919 75285680 CR1-Y3 653 - 75284919 75285680 0 2 481,212, 0,549, -,-, 48854 LINE CR1 1159 chr1 75286510 75287334 GGERVK10-int 661 + 75286510 75287334 0 2 364,460, 0,364, +,+, 48856 LTR ERVK 1159 chr1 75296678 75296903 GGLTR4A 643 - 75296678 75296903 0 2 92,57, 0,168, -,-, 48866 LTR ERVL 1159 chr1 75298419 75305057 GGLTR7-int 460 - 75298419 75305057 0 7 326,272,1261,1219,859,463,303, 0,495,896,3332,4559,5870,6335, -,-,-,-,-,-,-, 48868 LTR ERV1 1159 chr1 75308327 75308519 (TA)n 479 + 75308327 75308519 0 2 103,56, 0,136, +,+, 48874 Simple_repeat Simple_repeat 1159 chr1 75310962 75314925 CR1-C 687 - 75310962 75314925 0 2 85,392, 0,3571, -,-, 48878 LINE CR1 1159 chr1 75311050 75314533 GGLTR10C1 921 + 75311050 75314533 0 3 364,2755,364, 0,364,3119, +,+,+, 48879 LTR ERVK 1159 chr1 75315105 75319467 CR1-Y3 365 + 75315105 75319467 0 3 188,2391,69, 0,1902,4293, +,+,+, 48880 LINE CR1 1159 chr1 75319467 75321035 GGERV10_LTR 516 + 75319467 75321035 0 3 75,158,1238, 0,171,330, +,+,+, 48882 LTR ERVL 1159 chr1 75321035 75327044 GGLTR3B4 760 + 75321035 75327044 0 2 144,125, 0,5884, +,+, 48883 LTR ERVL 1159 chr1 75322485 75326919 GGLTR3F1 793 - 75322485 75326919 0 2 3906,526, 0,3908, -,-, 48885 LTR ERVL 1159 chr1 75327044 75329535 GGERVL18-int 414 - 75327044 75329535 0 2 1781,96, 0,2395, -,-, 48886 LTR ERVL 1159 chr1 75340937 75341497 CR1-Y2_Aves 308 + 75340937 75341497 0 2 384,130, 0,430, +,+, 48896 LINE CR1 1159 chr1 75344587 75345146 CR1-Y2_Aves 300 - 75344587 75345146 0 2 120,384, 0,175, -,-, 48898 LINE CR1 1160 chr1 75366622 75367408 CR1-Y2_Aves 353 + 75366622 75367408 0 3 290,53,408, 0,325,378, +,+,+, 48918 LINE CR1 1160 chr1 75389484 75389856 CR1-C4 504 + 75389484 75389856 0 2 150,222, 0,150, +,+, 48931 LINE CR1 1160 chr1 75401879 75404308 CR1-X2 465 + 75401879 75404308 0 2 1481,948, 0,1481, +,+, 48947 LINE CR1 1160 chr1 75423095 75425696 CR1-F2 585 - 75423095 75425696 0 3 738,673,81, 0,1301,2520, -,-,-, 48969 LINE CR1 1160 chr1 75451405 75454263 CR1-F2 451 + 75451405 75454263 0 2 1904,950, 0,1908, +,+, 48996 LINE CR1 1160 chr1 75462364 75463024 CR1-C4 611 - 75462364 75463024 0 2 506,150, 0,510, -,-, 49007 LINE CR1 1160 chr1 75475268 75476350 CR1-F0 490 + 75475268 75476350 0 2 259,255, 0,827, +,+, 49014 LINE CR1 1160 chr1 75485621 75491165 GGERV30_LTR 634 + 75485621 75491165 0 2 5264,280, 0,5264, +,+, 49027 LTR ERVL 1161 chr1 75503318 75503796 CR1-Y2_Aves 383 - 75503318 75503796 0 2 124,354, 0,124, -,-, 49036 LINE CR1 1161 chr1 75516857 75518225 CR1-F 394 - 75516857 75518225 0 2 762,592, 0,776, -,-, 49047 LINE CR1 1161 chr1 75526751 75534254 GGERVL18-int 540 - 75526751 75534254 0 4 262,2070,243,2743, 0,270,2959,4760, -,-,-,-, 49060 LTR ERVL 1161 chr1 75536816 75537674 CR1-D2 544 + 75536816 75537674 0 2 522,336, 0,522, +,+, 49065 LINE CR1 1161 chr1 75546278 75547242 CR1-B2 667 - 75546278 75547242 0 2 799,165, 0,799, -,-, 49073 LINE CR1 1161 chr1 75551226 75552671 CR1-H 784 + 75551226 75552671 0 2 857,588, 0,857, +,+, 49076 LINE CR1 1161 chr1 75577040 75577371 GGERV10_LTR 805 + 75577040 75577371 0 2 68,158, 0,173, +,+, 49089 LTR ERVL 1161 chr1 75590300 75591654 CR1-H 796 + 75590300 75591654 0 2 54,1255, 0,99, +,+, 49097 LINE CR1 1161 chr1 75591655 75591987 GGERV10_LTR 615 + 75591655 75591987 0 2 63,160, 0,172, +,+, 49098 LTR ERVL 1161 chr1 75604953 75605558 CR1-16_AMi 96 + 75604953 75605558 0 2 542,28, 0,577, +,+, 49110 LINE CR1 1161 chr1 75611060 75612634 GGERVL-C-int 445 + 75611060 75612634 0 3 56,602,290, 0,63,1284, +,+,+, 49117 LTR ERVL 1162 chr1 75639082 75640629 CR1-F2 410 - 75639082 75640629 0 2 264,780, 0,767, -,-, 49134 LINE CR1 1162 chr1 75641012 75642443 CR1-Y2_Aves 379 + 75641012 75642443 0 2 65,520, 0,911, +,+, 49136 LINE CR1 1162 chr1 75642622 75644511 Charlie12_GG 379 - 75642622 75644511 0 2 1724,130, 0,1759, -,-, 49138 DNA hAT-Charlie 1162 chr1 75645991 75647669 CR1-D2 482 + 75645991 75647669 0 3 158,220,720, 0,730,958, +,+,+, 49140 LINE CR1 1162 chr1 75666419 75672174 GGERVL-B-int 413 - 75666419 75672174 0 5 290,602,56,569,353, 0,909,1518,4809,5402, -,-,-,-,-, 49152 LTR ERVL 1162 chr1 75672337 75674448 CR1-X 457 - 75672337 75674448 0 2 1291,78, 0,2033, -,-, 49156 LINE CR1 1162 chr1 75695775 75697391 GGLTR7-int 355 + 75695775 75697391 0 3 310,328,831, 0,351,785, +,+,+, 49186 LTR ERV1 1162 chr1 75712190 75712526 GGLTR3G1 557 - 75712190 75712526 0 2 43,293, 0,43, -,-, 49195 LTR ERVL 1162 chr1 75740550 75745057 GGLTR7-int 693 + 75740550 75745057 0 5 550,494,655,324,403, 0,551,2524,3780,4104, +,+,+,+,+, 49223 LTR ERV1 1162 chr1 75749083 75750852 Charlie12_GG 418 - 75749083 75750852 0 4 91,1425,38,174, 0,91,1532,1595, -,-,-,-, 49232 DNA hAT-Charlie 1162 chr1 75752504 75754120 GGLTR7-int 355 - 75752504 75754120 0 3 831,328,310, 0,937,1306, -,-,-, 49236 LTR ERV1 1163 chr1 75761871 75764783 CR1-Y 373 + 75761871 75764783 0 2 1587,1319, 0,1593, +,+, 49251 LINE CR1 1163 chr1 75768122 75769457 GGERV22_LTR 669 - 75768122 75769457 0 2 54,260, 0,1075, -,-, 49255 LTR ERVL 1163 chr1 75779001 75783926 GGERVL18-int 586 - 75779001 75783926 0 2 251,4672, 0,253, -,-, 49262 LTR ERVL 1163 chr1 75810578 75812271 CR1-Y1_Aves 428 - 75810578 75812271 0 2 500,199, 0,1494, -,-, 49276 LINE CR1 1163 chr1 75840628 75841766 CR1-F2 685 + 75840628 75841766 0 2 245,378, 0,760, +,+, 49294 LINE CR1 1163 chr1 75881564 75882294 Char12Mar1_GG 348 - 75881564 75882294 0 2 345,385, 0,345, -,-, 49325 DNA hAT-Charlie 1164 chr1 75933706 75934348 GGLTR3G2 387 - 75933706 75934348 0 2 138,487, 0,155, -,-, 49358 LTR ERVL 1164 chr1 75935056 75935140 (CTTT)n 332 + 75935056 75935140 0 2 7,53, 0,31, +,+, 49360 Simple_repeat Simple_repeat 1164 chr1 75942127 75944459 CR1-C3 643 - 75942127 75944459 0 2 1760,528, 0,1804, -,-, 49366 LINE CR1 1164 chr1 75952573 75952752 GGLTR3G1 614 - 75952573 75952752 0 2 87,64, 0,115, -,-, 49380 LTR ERVL 1164 chr1 75976051 75977382 Char12Mar1_GG 592 - 75976051 75977382 0 2 375,911, 0,420, -,-, 49395 DNA hAT-Charlie 1164 chr1 75989512 75989623 (TTTC)n 208 + 75989512 75989623 0 2 62,17, 0,94, +,+, 49410 Simple_repeat Simple_repeat 1165 chr1 76037408 76037450 (TTTTTA)n 480 + 76037408 76037450 0 2 8,7, 0,35, +,+, 49439 Simple_repeat Simple_repeat 1165 chr1 76046451 76047400 Mariner1_GG 605 - 76046451 76047400 0 2 146,803, 0,146, -,-, 49447 DNA TcMar-Mariner 1165 chr1 76057895 76058842 ENS3-int 155 - 76057895 76058842 0 2 525,322, 0,625, -,-, 49452 LTR ERVL 1165 chr1 76062145 76065371 GGLTR7-int 177 + 76062145 76065371 0 3 222,371,139, 0,2421,3087, +,+,+, 49453 LTR ERV1 1165 chr1 76073285 76076402 CR1-C4 538 - 76073285 76076402 0 2 732,177, 0,2940, -,-, 49461 LINE CR1 1165 chr1 76076900 76078266 CR1-Y4 445 - 76076900 76078266 0 2 229,1137, 0,229, -,-, 49468 LINE CR1 1165 chr1 76078696 76079137 GGLTR8B 538 + 76078696 76079137 0 2 110,324, 0,117, +,+, 49469 LTR ERVL 1165 chr1 76092063 76092870 CR1-Y1_Aves 491 + 76092063 76092870 0 3 515,53,232, 0,522,575, +,+,+, 49479 LINE CR1 1165 chr1 76144237 76145103 CR1-F2 647 + 76144237 76145103 0 2 258,608, 0,258, +,+, 49501 LINE CR1 1166 chr1 76156596 76157729 CR1-C2 720 + 76156596 76157729 0 2 118,727, 0,406, +,+, 49505 LINE CR1 1166 chr1 76168602 76170011 CR1-Y4 550 - 76168602 76170011 0 3 362,909,134, 0,362,1275, -,-,-, 49510 LINE CR1 1166 chr1 76217895 76218649 GGERV28_LTR 839 - 76217895 76218649 0 2 472,282, 0,472, -,-, 49538 LTR ERVK 1166 chr1 76219104 76219949 GGLTR7-int 787 - 76219104 76219949 0 3 350,262,217, 0,350,628, -,-,-, 49539 LTR ERV1 1166 chr1 76226635 76227958 GGLTR5A 355 - 76226635 76227958 0 2 194,194, 0,1129, -,-, 49548 LTR ERVL 1166 chr1 76247813 76248267 Char12Mar1_GG 671 - 76247813 76248267 0 2 149,283, 0,171, -,-, 49560 DNA hAT-Charlie 1166 chr1 76260015 76261808 CR1-Y4 510 + 76260015 76261808 0 2 50,104, 0,1689, +,+, 49565 LINE CR1 1166 chr1 76275677 76276097 Char12Mar1_GG 520 - 76275677 76276097 0 2 138,264, 0,156, -,-, 49578 DNA hAT-Charlie 1167 chr1 76287173 76288451 CR1-Y4 530 + 76287173 76288451 0 2 50,104, 0,1174, +,+, 49583 LINE CR1 1167 chr1 76313066 76313159 (TTTTTG)n 450 + 76313066 76313159 0 2 13,16, 0,77, +,+, 49596 Simple_repeat Simple_repeat 1167 chr1 76319757 76322561 CR1-E 460 + 76319757 76322561 0 2 433,62, 0,2742, +,+, 49600 LINE CR1 1167 chr1 76330305 76335752 GGERVL18-int 576 - 76330305 76335752 0 5 351,61,1269,3170,135, 0,351,746,2015,5312, -,-,-,-,-, 49605 LTR ERVL 1167 chr1 76338304 76338627 GGERV10_LTR 581 + 76338304 76338627 0 2 62,160, 0,163, +,+, 49609 LTR ERVL 1167 chr1 76345806 76345878 A-rich 372 + 76345806 76345878 0 2 28,22, 0,50, +,+, 49611 Low_complexity Low_complexity 1167 chr1 76352262 76355596 CR1-B2 385 - 76352262 76355596 0 2 436,393, 0,2941, -,-, 49618 LINE CR1 1167 chr1 76358590 76359641 Char12Mar1_GG 638 - 76358590 76359641 0 2 225,341, 0,710, -,-, 49622 DNA hAT-Charlie 1167 chr1 76381453 76381827 TguLTR5e 244 + 76381453 76381827 0 2 168,182, 0,192, +,+, 49641 LTR ERVL 1167 chr1 76386742 76388470 CR1-Y 698 - 76386742 76388470 0 2 189,1539, 0,189, -,-, 49646 LINE CR1 1167 chr1 76403874 76407013 CR1-D2 483 - 76403874 76407013 0 4 336,1110,106,1575, 0,336,1446,1564, -,-,-,-, 49660 LINE CR1 1168 chr1 76466465 76470399 CR1-B2 542 - 76466465 76470399 0 2 678,1239, 0,2695, -,-, 49726 LINE CR1 1168 chr1 76475663 76475994 GGERV10_LTR 709 - 76475663 76475994 0 2 160,65, 0,266, -,-, 49732 LTR ERVL 1168 chr1 76484881 76487289 GGERVL18-int 328 - 76484881 76487289 0 3 1288,369,751, 0,1288,1657, -,-,-, 49737 LTR ERVL 1168 chr1 76496480 76497316 CR1-11_Crp 141 - 76496480 76497316 0 2 428,276, 0,560, -,-, 49745 LINE CR1 1168 chr1 76502200 76502859 CR1-L3B_Croc 143 + 76502200 76502859 0 2 217,335, 0,324, +,+, 49746 LINE CR1 1169 chr1 76559115 76559624 GGLTR5B 426 - 76559115 76559624 0 2 194,57, 0,452, -,-, 49772 LTR ERVL 1169 chr1 76570212 76571653 CR1-Y1_Aves 323 - 76570212 76571653 0 3 456,226,759, 0,456,682, -,-,-, 49780 LINE CR1 1169 chr1 76579144 76581091 CR1-G 804 + 76579144 76581091 0 2 429,1214, 0,733, +,+, 49787 LINE CR1 1169 chr1 76589229 76592692 GGLTR10C2 909 + 76589229 76592692 0 3 364,2734,365, 0,364,3098, +,+,+, 49798 LTR ERVK 1169 chr1 76625622 76626979 CR1-L3B_Croc 117 - 76625622 76626979 0 2 668,222, 0,1135, -,-, 49819 LINE CR1 1169 chr1 76656061 76656443 CR1-D2 347 + 76656061 76656443 0 2 100,282, 0,100, +,+, 49842 LINE CR1 1169 chr1 76660158 76661909 CR1-B2 625 + 76660158 76661909 0 3 812,77,630, 0,1044,1121, +,+,+, 49849 LINE CR1 1169 chr1 76666521 76667004 CR1-Y1_Aves 209 - 76666521 76667004 0 2 327,137, 0,346, -,-, 49855 LINE CR1 1170 chr1 76680191 76680416 Char12Mar1_GG 494 - 76680191 76680416 0 2 142,83, 0,142, -,-, 49868 DNA hAT-Charlie 1170 chr1 76741522 76742454 CR1-L3B_Croc 252 - 76741522 76742454 0 2 82,174, 0,758, -,-, 49901 LINE CR1 1170 chr1 76747287 76751165 CR1-F 385 - 76747287 76751165 0 2 3677,201, 0,3677, -,-, 49906 LINE CR1 1170 chr1 76783893 76785639 CR1-D2 677 + 76783893 76785639 0 3 201,448,140, 0,467,1606, +,+,+, 49927 LINE CR1 1171 chr1 76823675 76824576 CR1-C4 554 - 76823675 76824576 0 2 210,193, 0,708, -,-, 49941 LINE CR1 1171 chr1 76839344 76840083 CR1-L3B_Croc 289 + 76839344 76840083 0 2 476,104, 0,635, +,+, 49950 LINE CR1 1171 chr1 76881571 76883021 CR1-X2 617 + 76881571 76883021 0 2 153,653, 0,797, +,+, 49970 LINE CR1 1171 chr1 76886815 76888021 CR1-L3B_Croc 171 + 76886815 76888021 0 2 283,196, 0,1010, +,+, 49976 LINE CR1 1171 chr1 76888810 76890077 CR1-H 766 - 76888810 76890077 0 2 268,999, 0,268, -,-, 49978 LINE CR1 1172 chr1 76961833 76963162 CR1-L3B_Croc 172 - 76961833 76963162 0 2 297,251, 0,1078, -,-, 50007 LINE CR1 1172 chr1 77014178 77025812 REP131 217 - 77014178 77025812 0 2 74,195, 0,11439, -,-, 50029 DNA? DNA? 1172 chr1 77057457 77058810 CR1-Y1_Aves 424 + 77057457 77058810 0 2 923,430, 0,923, +,+, 50071 LINE CR1 1173 chr1 77089498 77091439 CR1-L3B_Croc 178 + 77089498 77091439 0 3 1372,146,163, 0,1555,1778, +,+,+, 50087 LINE CR1 1173 chr1 77159411 77159909 CR1-11_Crp 140 - 77159411 77159909 0 2 185,177, 0,321, -,-, 50129 LINE CR1 1173 chr1 77163265 77163855 GGLTR5A 240 + 77163265 77163855 0 2 386,168, 0,422, +,+, 50132 LTR ERVL 1173 chr1 77170802 77171685 CR1-11_Crp 155 - 77170802 77171685 0 2 139,196, 0,687, -,-, 50136 LINE CR1 1174 chr1 77327275 77327807 CR1-X2 517 - 77327275 77327807 0 2 340,192, 0,340, -,-, 50209 LINE CR1 1175 chr1 77333429 77334314 GGERVL-A-int 184 + 77333429 77334314 0 2 264,202, 0,683, +,+, 50213 LTR ERVL 1175 chr1 77334852 77337477 GGERVL-A-int 249 + 77334852 77337477 0 3 262,524,635, 0,378,1990, +,+,+, 50215 LTR ERVL 1176 chr1 77465162 77466063 CR1-F2 512 + 77465162 77466063 0 2 140,301, 0,600, +,+, 50281 LINE CR1 1176 chr1 77466770 77469362 CR1-E 460 - 77466770 77469362 0 2 152,1923, 0,669, -,-, 50283 LINE CR1 1176 chr1 77466921 77467451 CR1-C3 601 + 77466921 77467451 0 3 55,429,13, 0,55,517, +,+,+, 50284 LINE CR1 1176 chr1 77474918 77475448 GGERVK10-int 586 + 77474918 77475448 0 2 154,376, 0,154, +,+, 50296 LTR ERVK 1176 chr1 77530740 77533281 CR1-Y2_Aves 369 + 77530740 77533281 0 4 343,124,227,54, 0,1220,2225,2487, +,+,+,+, 50322 LINE CR1 1177 chr1 77618954 77620700 CR1-D 162 - 77618954 77620700 0 2 445,137, 0,1609, -,-, 50374 LINE CR1 1177 chr1 77627382 77627443 CR1-B2 514 + 77627382 77627443 0 2 17,44, 0,17, +,+, 50382 LINE CR1 1177 chr1 77630300 77631550 Charlie7_Aves 340 - 77630300 77631550 0 2 380,843, 0,407, -,-, 50384 DNA hAT-Charlie 1177 chr1 77685649 77686567 CR1-Y1_Aves 410 + 77685649 77686567 0 2 408,261, 0,657, +,+, 50413 LINE CR1 1177 chr1 77686057 77686306 GGLTR3C2 667 + 77686057 77686306 0 2 180,63, 0,186, +,+, 50414 LTR ERVL 1178 chr1 77726851 77729737 CR1-C4 505 - 77726851 77729737 0 2 2762,124, 0,2762, -,-, 50435 LINE CR1 1178 chr1 77753660 77754356 GGERV20_I-int 484 - 77753660 77754356 0 2 128,568, 0,128, -,-, 50448 LTR ERVL 1178 chr1 77783173 77785172 CR1-C4 590 - 77783173 77785172 0 2 1486,513, 0,1486, -,-, 50462 LINE CR1 1178 chr1 77786391 77786597 GGLTR8B 523 + 77786391 77786597 0 2 45,161, 0,45, +,+, 50464 LTR ERVL 1178 chr1 77794857 77795577 CR1-Y2_Aves 128 + 77794857 77795577 0 2 151,569, 0,151, +,+, 50470 LINE CR1 1178 chr1 77818609 77820355 Charlie7_Aves 249 - 77818609 77820355 0 2 554,262, 0,1484, -,-, 50487 DNA hAT-Charlie 1178 chr1 77829407 77830783 CR1-B2 715 - 77829407 77830783 0 2 315,1060, 0,316, -,-, 50504 LINE CR1 1178 chr1 77835807 77837184 CR1-B2 655 - 77835807 77837184 0 2 315,1061, 0,316, -,-, 50512 LINE CR1 1178 chr1 77848949 77849584 CR1-H 100 - 77848949 77849584 0 2 549,45, 0,590, -,-, 50532 LINE CR1 1179 chr1 77871468 77871726 CR1-Y2_Aves 315 - 77871468 77871726 0 2 86,172, 0,86, -,-, 50554 LINE CR1 1179 chr1 77889557 77892520 CR1-Y 441 + 77889557 77892520 0 3 90,188,1467, 0,94,1496, +,+,+, 50574 LINE CR1 1179 chr1 77889832 77891052 CR1-C4 638 - 77889832 77891052 0 2 803,415, 0,805, -,-, 50575 LINE CR1 1179 chr1 77897508 77897739 Char12Mar1_GG 482 - 77897508 77897739 0 2 104,124, 0,107, -,-, 50578 DNA hAT-Charlie 1179 chr1 77922644 77923983 GGERVL-A-int 181 + 77922644 77923983 0 2 200,1050, 0,289, +,+, 50599 LTR ERVL 1179 chr1 77923968 77924834 GGERVL-A-int 483 + 77923968 77924834 0 2 368,498, 0,368, +,+, 50600 LTR ERVL 1179 chr1 77928420 77928733 Charlie12_GG 406 - 77928420 77928733 0 2 174,60, 0,253, -,-, 50605 DNA hAT-Charlie 1179 chr1 77946808 77947063 CR1-C4 490 + 77946808 77947063 0 2 165,89, 0,166, +,+, 50622 LINE CR1 1179 chr1 77951089 77952199 CR1-C4 535 + 77951089 77952199 0 2 373,737, 0,373, +,+, 50626 LINE CR1 1179 chr1 77970072 77970620 CR1-X 252 + 77970072 77970620 0 2 395,136, 0,412, +,+, 50638 LINE CR1 1179 chr1 77979086 77982894 CR1-C4 363 - 77979086 77982894 0 2 2198,1610, 0,2198, -,-, 50646 LINE CR1 1179 chr1 77985654 77987529 CR1-X2 259 - 77985654 77987529 0 3 490,943,337, 0,490,1538, -,-,-, 50650 LINE CR1 1180 chr1 78019361 78020277 CR1-E 510 - 78019361 78020277 0 2 173,735, 0,181, -,-, 50674 LINE CR1 1180 chr1 78028208 78029949 CR1-D 621 - 78028208 78029949 0 2 216,1176, 0,565, -,-, 50678 LINE CR1 1180 chr1 78060447 78063747 CR1-H 756 + 78060447 78063747 0 2 375,2353, 0,947, +,+, 50699 LINE CR1 1180 chr1 78089321 78089820 CR1-F2 485 + 78089321 78089820 0 2 130,369, 0,130, +,+, 50727 LINE CR1 1180 chr1 78099273 78100648 CR1-H2 377 - 78099273 78100648 0 2 1062,307, 0,1068, -,-, 50736 LINE CR1 1180 chr1 78105231 78115904 Charlie7a_Aves 544 - 78105231 78115904 0 2 58,58, 0,10615, -,-, 50741 DNA hAT-Charlie 1180 chr1 78108823 78109507 CR1-H 725 - 78108823 78109507 0 2 114,570, 0,114, -,-, 50744 LINE CR1 1180 chr1 78109507 78110056 GGLTR3B4 366 - 78109507 78110056 0 2 424,94, 0,455, -,-, 50745 LTR ERVL 1181 chr1 78125133 78127145 CR1-H 752 - 78125133 78127145 0 3 107,108,492, 0,107,1520, -,-,-, 50757 LINE CR1 1181 chr1 78125348 78126669 GGERVL-A-int 798 - 78125348 78126669 0 2 472,849, 0,472, -,-, 50758 LTR ERVL 1181 chr1 78127146 78129535 GGLTR3C2 425 - 78127146 78129535 0 2 217,349, 0,2040, -,-, 50759 LTR ERVL 1181 chr1 78130292 78131841 CR1-F2 467 - 78130292 78131841 0 3 574,817,158, 0,574,1391, -,-,-, 50762 LINE CR1 1181 chr1 78141226 78142667 CR1-H 749 - 78141226 78142667 0 3 107,577,178, 0,107,1263, -,-,-, 50771 LINE CR1 1181 chr1 78141910 78142489 GGLTR3C2 378 - 78141910 78142489 0 2 426,115, 0,464, -,-, 50772 LTR ERVL 1181 chr1 78151356 78151692 GGERV10_LTR 568 - 78151356 78151692 0 2 159,85, 0,251, -,-, 50777 LTR ERVL 1181 chr1 78151774 78153853 CR1-D 616 + 78151774 78153853 0 2 840,961, 0,1118, +,+, 50779 LINE CR1 1181 chr1 78156819 78157494 GGLTR7-int 778 - 78156819 78157494 0 3 161,262,213, 0,178,462, -,-,-, 50781 LTR ERV1 1181 chr1 78161245 78161573 GGERV10_LTR 591 - 78161245 78161573 0 2 159,72, 0,256, -,-, 50783 LTR ERVL 1181 chr1 78162523 78163449 TguLTR5e 313 + 78162523 78163449 0 2 94,166, 0,760, +,+, 50785 LTR ERVL 1181 chr1 78163468 78165865 CR1-D 535 + 78163468 78165865 0 2 1123,996, 0,1401, +,+, 50786 LINE CR1 1181 chr1 78173683 78174020 GGERV10_LTR 412 - 78173683 78174020 0 2 159,83, 0,254, -,-, 50790 LTR ERVL 1181 chr1 78174102 78176211 CR1-D 554 + 78174102 78176211 0 2 826,998, 0,1111, +,+, 50792 LINE CR1 1181 chr1 78177390 78178315 TguLTR5e 343 + 78177390 78178315 0 2 98,166, 0,759, +,+, 50795 LTR ERVL 1181 chr1 78178329 78180701 CR1-D 565 + 78178329 78180701 0 2 1120,975, 0,1397, +,+, 50797 LINE CR1 1181 chr1 78187999 78188315 GGERV10_LTR 564 - 78187999 78188315 0 2 159,66, 0,250, -,-, 50801 LTR ERVL 1181 chr1 78191142 78191987 GGLTR7-int 788 + 78191142 78191987 0 3 213,260,350, 0,235,495, +,+,+, 50804 LTR ERV1 1181 chr1 78192898 78194924 CR1-D 619 + 78192898 78194924 0 2 772,977, 0,1049, +,+, 50805 LINE CR1 1181 chr1 78198986 78199909 TguLTR5e 336 + 78198986 78199909 0 2 98,166, 0,757, +,+, 50811 LTR ERVL 1181 chr1 78199923 78202294 CR1-D 533 + 78199923 78202294 0 2 1122,978, 0,1393, +,+, 50813 LINE CR1 1181 chr1 78210481 78211407 TguLTR5e 291 + 78210481 78211407 0 2 98,166, 0,760, +,+, 50820 LTR ERVL 1181 chr1 78211421 78213800 CR1-D 536 + 78211421 78213800 0 2 1122,979, 0,1400, +,+, 50822 LINE CR1 1181 chr1 78222414 78224797 CR1-D 551 + 78222414 78224797 0 2 1124,982, 0,1401, +,+, 50830 LINE CR1 1181 chr1 78227374 78228124 GGLTR3C1 651 + 78227374 78228124 0 3 36,209,106, 0,435,644, +,+,+, 50832 LTR ERVL 1181 chr1 78234916 78236217 CR1-Y1_Aves 530 - 78234916 78236217 0 3 140,294,316, 0,145,985, -,-,-, 50835 LINE CR1 1181 chr1 78236570 78237464 CR1-Y2_Aves 493 - 78236570 78237464 0 2 176,434, 0,460, -,-, 50836 LINE CR1 1182 chr1 78378453 78379462 CR1-B2 736 - 78378453 78379462 0 2 201,808, 0,201, -,-, 50919 LINE CR1 1183 chr1 78381412 78382374 CR1-C3 725 + 78381412 78382374 0 2 508,454, 0,508, +,+, 50921 LINE CR1 1183 chr1 78389425 78389764 GGLTR5B 293 + 78389425 78389764 0 2 92,153, 0,186, +,+, 50932 LTR ERVL 1183 chr1 78420388 78420723 GGLTR11-int 346 + 78420388 78420723 0 2 138,54, 0,281, +,+, 50956 LTR ERV1 1183 chr1 78420786 78421644 GGLTR11 292 + 78420786 78421644 0 2 331,261, 0,597, +,+, 50957 LTR ERV1 1183 chr1 78443694 78444580 CR1-F2 602 + 78443694 78444580 0 3 167,126,471, 0,289,415, +,+,+, 50973 LINE CR1 1183 chr1 78460320 78461696 CR1-B2 673 + 78460320 78461696 0 2 1060,315, 0,1061, +,+, 50992 LINE CR1 1183 chr1 78486847 78488008 CR1-Y1_Aves 448 + 78486847 78488008 0 2 239,133, 0,1028, +,+, 51014 LINE CR1 1184 chr1 78613238 78623553 Char12Mar1_GG 633 - 78613238 78623553 0 4 125,110,63,64, 0,142,252,10251, -,-,-,-, 51089 DNA hAT-Charlie 1184 chr1 78623238 78623489 Char12Mar1_GG 689 - 78623238 78623489 0 2 123,111, 0,140, -,-, 51097 DNA hAT-Charlie 1184 chr1 78625722 78626356 CR1-Y4 253 + 78625722 78626356 0 2 94,232, 0,402, +,+, 51099 LINE CR1 1185 chr1 78661731 78661811 A-rich 544 + 78661731 78661811 0 2 12,13, 0,67, +,+, 51125 Low_complexity Low_complexity 1185 chr1 78685300 78686030 CR1-L3B_Croc 275 - 78685300 78686030 0 2 174,233, 0,497, -,-, 51136 LINE CR1 1185 chr1 78732092 78732164 (TTTC)n 256 + 78732092 78732164 0 2 38,15, 0,57, +,+, 51161 Simple_repeat Simple_repeat 1185 chr1 78759499 78759870 (GGAA)n 893 + 78759499 78759870 0 2 180,180, 0,191, +,+, 51178 Simple_repeat Simple_repeat 1185 chr1 78761858 78762637 CR1-C4 646 + 78761858 78762637 0 2 79,700, 0,79, +,+, 51180 LINE CR1 1186 chr1 78834685 78835953 CR1-X2 539 + 78834685 78835953 0 3 315,359,472, 0,402,796, +,+,+, 51224 LINE CR1 1186 chr1 78839657 78840019 CR1-E 576 - 78839657 78840019 0 2 175,187, 0,175, -,-, 51227 LINE CR1 1186 chr1 78846031 78848468 CR1-C4 453 - 78846031 78848468 0 2 1395,1027, 0,1410, -,-, 51231 LINE CR1 1186 chr1 78870973 78872401 CR1-L3B_Croc 156 - 78870973 78872401 0 2 496,119, 0,1309, -,-, 51251 LINE CR1 1186 chr1 78873375 78874447 CR1-Y 252 - 78873375 78874447 0 2 272,756, 0,316, -,-, 51254 LINE CR1 1186 chr1 78881680 78882593 CR1-L3A_Croc 121 - 78881680 78882593 0 2 309,345, 0,568, -,-, 51258 LINE CR1 1187 chr1 79027557 79028496 Mariner1_GG 631 - 79027557 79028496 0 2 513,426, 0,513, -,-, 51349 DNA TcMar-Mariner 1189 chr1 79268576 79269648 CR1-F2 577 + 79268576 79269648 0 2 220,852, 0,220, +,+, 51438 LINE CR1 1190 chr1 79307772 79308267 CR1-F0 645 + 79307772 79308267 0 2 180,41, 0,454, +,+, 51458 LINE CR1 1190 chr1 79318888 79321261 CR1-C4 515 + 79318888 79321261 0 3 371,1163,88, 0,914,2285, +,+,+, 51470 LINE CR1 1190 chr1 79324313 79327297 CR1-C4 475 - 79324313 79327297 0 3 88,410,543, 0,296,2441, -,-,-, 51476 LINE CR1 1190 chr1 79336235 79336784 Char12Mar1_GG 524 - 79336235 79336784 0 2 301,221, 0,328, -,-, 51489 DNA hAT-Charlie 1190 chr1 79344276 79345458 CR1-X 213 - 79344276 79345458 0 2 346,469, 0,713, -,-, 51495 LINE CR1 1190 chr1 79351628 79354320 CR1-C2 544 - 79351628 79354320 0 2 1076,863, 0,1829, -,-, 51502 LINE CR1 1191 chr1 79439667 79440267 Char12Mar1_GG 474 - 79439667 79440267 0 2 416,96, 0,504, -,-, 51543 DNA hAT-Charlie 1191 chr1 79486814 79486951 (T)n 863 + 79486814 79486951 0 2 28,66, 0,71, +,+, 51565 Simple_repeat Simple_repeat 1192 chr1 79570049 79570821 GGLTR8B 175 + 79570049 79570821 0 2 310,398, 0,374, +,+, 51602 LTR ERVL 1192 chr1 79590348 79591404 CR1-H 773 + 79590348 79591404 0 3 189,169,667, 0,189,389, +,+,+, 51613 LINE CR1 1192 chr1 79616825 79617860 CR1-X2 502 - 79616825 79617860 0 2 534,494, 0,541, -,-, 51631 LINE CR1 1193 chr1 79696441 79697749 CR1-L3B_Croc 233 - 79696441 79697749 0 2 388,111, 0,1197, -,-, 51684 LINE CR1 1193 chr1 79747768 79748559 Charlie7a_Aves 255 - 79747768 79748559 0 2 105,123, 0,668, -,-, 51714 DNA hAT-Charlie 1194 chr1 79864524 79864591 (TTCC)n 378 + 79864524 79864591 0 2 16,10, 0,57, +,+, 51771 Simple_repeat Simple_repeat 1195 chr1 79963736 79963890 GA-rich 222 + 79963736 79963890 0 2 53,64, 0,90, +,+, 51826 Low_complexity Low_complexity 1195 chr1 79979142 79979671 CR1-X1 183 - 79979142 79979671 0 2 68,155, 0,374, -,-, 51832 LINE CR1 1195 chr1 80015891 80017104 CR1-F2 612 - 80015891 80017104 0 2 784,247, 0,966, -,-, 51844 LINE CR1 1195 chr1 80071573 80071633 (TTTG)n 498 + 80071573 80071633 0 2 24,6, 0,54, +,+, 51863 Simple_repeat Simple_repeat 1196 chr1 80182266 80184257 CR1-C2 506 + 80182266 80184257 0 2 512,1479, 0,512, +,+, 51931 LINE CR1 1196 chr1 80201050 80204803 CR1-H 683 + 80201050 80204803 0 2 2512,270, 0,3483, +,+, 51951 LINE CR1 1196 chr1 80203564 80204556 CR1-G 614 + 80203564 80204556 0 2 123,869, 0,123, +,+, 51952 LINE CR1 1197 chr1 80307759 80311777 CR1-C4 676 + 80307759 80311777 0 2 84,60, 0,3958, +,+, 52007 LINE CR1 1197 chr1 80338019 80338471 CR1-Y1_Aves 513 - 80338019 80338471 0 2 118,79, 0,373, -,-, 52019 LINE CR1 149 chr1 80346197 80348079 CR1-Y1_Aves 434 + 80346197 80348079 0 2 251,328, 0,1554, +,+, 52023 LINE CR1 1198 chr1 80348159 80348570 GGLTR5A 621 - 80348159 80348570 0 2 57,344, 0,67, -,-, 52025 LTR ERVL 1198 chr1 80357816 80358382 GGLTR5B 528 + 80357816 80358382 0 2 341,167, 0,399, +,+, 52034 LTR ERVL 1198 chr1 80464960 80465893 CR1-X2 563 + 80464960 80465893 0 2 465,106, 0,827, +,+, 52093 LINE CR1 1198 chr1 80465425 80465780 CR1-F2 644 + 80465425 80465780 0 2 188,77, 0,278, +,+, 52094 LINE CR1 1199 chr1 80599926 80600582 GGLTR8A 140 + 80599926 80600582 0 2 325,312, 0,344, +,+, 52142 LTR ERVL 1200 chr1 80677416 80679522 CR1-L3B_Croc 234 - 80677416 80679522 0 4 1231,116,122,416, 0,1376,1523,1690, -,-,-,-, 52179 LINE CR1 1200 chr1 80721886 80722253 AmnSINE1 382 + 80721886 80722253 0 2 89,108, 0,259, +,+, 52209 SINE 5S-Deu-L2 1201 chr1 80744121 80744882 Z-REP 475 + 80744121 80744882 0 2 111,110, 0,651, +,+, 52225 Satellite macro 1201 chr1 80793025 80795400 CR1-D 729 - 80793025 80795400 0 2 2241,133, 0,2242, -,-, 52250 LINE CR1 1201 chr1 80804435 80804790 CR1-F2 620 + 80804435 80804790 0 2 293,62, 0,293, +,+, 52258 LINE CR1 1202 chr1 80896171 80896833 CR1-12_AMi 263 - 80896171 80896833 0 2 129,262, 0,400, -,-, 52300 LINE CR1 1202 chr1 80939449 80939716 CR1-H2 434 - 80939449 80939716 0 2 46,210, 0,57, -,-, 52321 LINE CR1 1202 chr1 80941074 80941755 CR1-X2 113 + 80941074 80941755 0 2 180,266, 0,415, +,+, 52323 LINE CR1 1202 chr1 80963010 80963709 CR1-C4 296 - 80963010 80963709 0 2 437,219, 0,480, -,-, 52331 LINE CR1 1202 chr1 80968598 80971118 CR1-Y4 525 - 80968598 80971118 0 2 1152,1367, 0,1153, -,-, 52337 LINE CR1 1203 chr1 81041918 81047746 GGERV10_LTR 979 - 81041918 81047746 0 3 220,5385,222, 0,220,5606, -,-,-, 52375 LTR ERVL 1203 chr1 81114315 81115188 CR1-Y2_Aves 115 + 81114315 81115188 0 2 320,321, 0,552, +,+, 52416 LINE CR1 1204 chr1 81171423 81173109 CR1-Y 629 - 81171423 81173109 0 2 1563,123, 0,1563, -,-, 52449 LINE CR1 1204 chr1 81196595 81198122 CR1-L3B_Croc 430 - 81196595 81198122 0 2 47,452, 0,1075, -,-, 52474 LINE CR1 1204 chr1 81261143 81261940 CR1-Y4 648 + 81261143 81261940 0 2 616,181, 0,616, +,+, 52512 LINE CR1 1206 chr1 81427178 81427969 AmnSINE1 244 - 81427178 81427969 0 2 140,102, 0,689, -,-, 52612 SINE 5S-Deu-L2 1207 chr1 81552189 81554460 CR1-F2 495 - 81552189 81554460 0 3 1168,560,89, 0,1614,2182, -,-,-, 52671 LINE CR1 1207 chr1 81553373 81553807 CR1-Y2 638 + 81553373 81553807 0 2 44,100, 0,334, +,+, 52672 LINE CR1 1207 chr1 81573694 81574287 CR1-C4 611 + 81573694 81574287 0 3 45,90,415, 0,88,178, +,+,+, 52690 LINE CR1 1208 chr1 81735867 81736030 GGLTR8B 456 - 81735867 81736030 0 2 106,57, 0,106, -,-, 52777 LTR ERVL 1208 chr1 81751443 81752308 CR1-Y2_Aves 341 + 81751443 81752308 0 2 455,212, 0,653, +,+, 52789 LINE CR1 1209 chr1 81873359 81874042 CR1-X1 386 + 81873359 81874042 0 2 138,544, 0,139, +,+, 52856 LINE CR1 1210 chr1 82033105 82033206 (TTC)n 414 + 82033105 82033206 0 2 16,6, 0,95, +,+, 52954 Simple_repeat Simple_repeat 1211 chr1 82120073 82120162 (GTAT)n 340 + 82120073 82120162 0 2 19,20, 0,69, +,+, 53005 Simple_repeat Simple_repeat 1211 chr1 82132674 82133769 CR1-Y2_Aves 208 - 82132674 82133769 0 2 753,147, 0,948, -,-, 53014 LINE CR1 1212 chr1 82245269 82245702 Char12Mar1_GG 664 - 82245269 82245702 0 2 316,117, 0,316, -,-, 53084 DNA hAT-Charlie 1212 chr1 82303378 82304271 CR1-3_Croc 52 - 82303378 82304271 0 2 148,421, 0,472, -,-, 53124 LINE CR1 1213 chr1 82376539 82380317 CR1-C4 538 - 82376539 82380317 0 2 844,2369, 0,1409, -,-, 53167 LINE CR1 1214 chr1 82500810 82501546 CR1-Y2_Aves 105 - 82500810 82501546 0 2 94,164, 0,572, -,-, 53247 LINE CR1 1214 chr1 82518452 82519100 CR1-F2 628 + 82518452 82519100 0 2 122,526, 0,122, +,+, 53253 LINE CR1 1215 chr1 82592511 82593365 CR1-L3B_Croc 180 - 82592511 82593365 0 2 313,537, 0,317, -,-, 53294 LINE CR1 1215 chr1 82601379 82601428 (TTTC)n 384 + 82601379 82601428 0 2 12,6, 0,43, +,+, 53300 Simple_repeat Simple_repeat 1216 chr1 82805887 82806278 Char12Mar1_GG 615 - 82805887 82806278 0 2 60,325, 0,66, -,-, 53423 DNA hAT-Charlie 1217 chr1 82857226 82857620 Char12Mar1_GG 739 - 82857226 82857620 0 2 93,298, 0,96, -,-, 53472 DNA hAT-Charlie 1217 chr1 82931359 82931413 (TTCTTT)n 554 + 82931359 82931413 0 2 10,10, 0,44, +,+, 53508 Simple_repeat Simple_repeat 1217 chr1 82966876 82967000 GA-rich 460 + 82966876 82967000 0 2 13,11, 0,113, +,+, 53546 Low_complexity Low_complexity 1218 chr1 82993624 82994369 CR1-D 696 + 82993624 82994369 0 2 303,442, 0,303, +,+, 53565 LINE CR1 1218 chr1 82994360 82998979 CR1-H 443 + 82994360 82998979 0 2 279,4262, 0,357, +,+, 53566 LINE CR1 1219 chr1 83103651 83107155 CR1-F2 502 - 83103651 83107155 0 2 292,1288, 0,2216, -,-, 53596 LINE CR1 1219 chr1 83151652 83151805 (AATAACGGA)n 878 + 83151652 83151805 0 2 51,51, 0,102, +,+, 53638 Simple_repeat Simple_repeat 1219 chr1 83151864 83152018 (AAATAACGG)n 892 + 83151864 83152018 0 2 43,52, 0,102, +,+, 53639 Simple_repeat Simple_repeat 1219 chr1 83161605 83161782 (AACGGAAAT)n 859 + 83161605 83161782 0 2 84,39, 0,138, +,+, 53667 Simple_repeat Simple_repeat 1219 chr1 83163461 83163621 (GGAAATAAC)n 947 + 83163461 83163621 0 2 45,58, 0,102, +,+, 53673 Simple_repeat Simple_repeat 1219 chr1 83167956 83171206 (AACAACGCA)n 784 + 83167956 83171206 0 2 3134,60, 0,3190, +,+, 53677 Simple_repeat Simple_repeat 1220 chr1 83260893 83261154 CR1-Y1_Aves 476 - 83260893 83261154 0 2 158,103, 0,158, -,-, 53731 LINE CR1 1220 chr1 83316957 83317031 GA-rich 450 + 83316957 83317031 0 2 16,21, 0,53, +,+, 53746 Low_complexity Low_complexity 1220 chr1 83342254 83342359 CR1-C3 824 - 83342254 83342359 0 2 12,34, 0,71, -,-, 53764 LINE CR1 1221 chr1 83413176 83415046 CR1-D 602 - 83413176 83415046 0 2 1151,718, 0,1152, -,-, 53803 LINE CR1 1221 chr1 83449683 83450090 Charlie12_GG 790 - 83449683 83450090 0 2 90,79, 0,328, -,-, 53818 DNA hAT-Charlie 1221 chr1 83456158 83456823 CR1-C3 688 + 83456158 83456823 0 2 189,357, 0,308, +,+, 53822 LINE CR1 1221 chr1 83457266 83457336 (GTTT)n 410 + 83457266 83457336 0 2 16,26, 0,44, +,+, 53825 Simple_repeat Simple_repeat 1221 chr1 83492000 83492045 (TGTTTT)n 586 + 83492000 83492045 0 2 8,12, 0,33, +,+, 53845 Simple_repeat Simple_repeat 1222 chr1 83517522 83518417 CR1-F2 584 + 83517522 83518417 0 2 434,461, 0,434, +,+, 53853 LINE CR1 1222 chr1 83554885 83556379 CR1-F2 586 - 83554885 83556379 0 2 1154,317, 0,1177, -,-, 53871 LINE CR1 1223 chr1 83638843 83639283 Char12Mar1_GG 571 - 83638843 83639283 0 2 204,236, 0,204, -,-, 53922 DNA hAT-Charlie 1223 chr1 83689784 83690139 CR1-F2 570 - 83689784 83690139 0 2 57,139, 0,216, -,-, 53942 LINE CR1 1223 chr1 83748557 83749064 CR1-X 243 + 83748557 83749064 0 2 136,348, 0,159, +,+, 53972 LINE CR1 1225 chr1 83903217 83904743 CR1-Y3 564 + 83903217 83904743 0 2 538,575, 0,951, +,+, 54043 LINE CR1 1225 chr1 83935832 83937419 CR1-X1 595 - 83935832 83937419 0 3 246,255,974, 0,246,613, -,-,-, 54064 LINE CR1 1225 chr1 83958888 83959412 GGLTR8B 348 - 83958888 83959412 0 2 82,313, 0,211, -,-, 54072 LTR ERVL 1225 chr1 83961865 83962832 CR1-C4 433 + 83961865 83962832 0 2 153,612, 0,355, +,+, 54073 LINE CR1 1225 chr1 83964567 83966941 CR1-C3 345 - 83964567 83966941 0 2 893,427, 0,1947, -,-, 54076 LINE CR1 1225 chr1 83978833 83979218 Mariner1b_GG 516 - 83978833 83979218 0 2 315,70, 0,315, -,-, 54086 DNA TcMar-Mariner 1226 chr1 84069734 84071213 CR1-C3 578 + 84069734 84071213 0 2 307,293, 0,1186, +,+, 54118 LINE CR1 1226 chr1 84084504 84084911 CR1-H 678 + 84084504 84084911 0 2 90,317, 0,90, +,+, 54128 LINE CR1 1227 chr1 84187177 84188389 CR1-X2 642 + 84187177 84188389 0 2 997,215, 0,997, +,+, 54196 LINE CR1 1227 chr1 84207258 84208014 GGLTR12C 436 - 84207258 84208014 0 2 269,97, 0,659, -,-, 54210 LTR ERVL 1227 chr1 84236556 84238101 CR1-C4 621 - 84236556 84238101 0 2 881,659, 0,886, -,-, 54223 LINE CR1 1228 chr1 84348827 84353658 CR1-Y2_Aves 176 + 84348827 84353658 0 2 474,148, 0,4683, +,+, 54273 LINE CR1 1228 chr1 84357410 84357929 GGERVL18-int 383 + 84357410 84357929 0 2 190,329, 0,190, +,+, 54277 LTR ERVL 1228 chr1 84365289 84365623 CR1-11_Crp 379 + 84365289 84365623 0 2 156,120, 0,214, +,+, 54279 LINE CR1 1229 chr1 84415929 84417368 CR1-D2 639 + 84415929 84417368 0 2 574,865, 0,574, +,+, 54307 LINE CR1 1230 chr1 84552412 84552457 (ACAA)n 490 + 84552412 84552457 0 2 14,9, 0,36, +,+, 54385 Simple_repeat Simple_repeat 1230 chr1 84662661 84662697 (CATA)n 674 + 84662661 84662697 0 2 7,6, 0,30, +,+, 54433 Simple_repeat Simple_repeat 1233 chr1 84965931 84966941 GGERVL-B-int 319 - 84965931 84966941 0 2 591,414, 0,596, -,-, 54594 LTR ERVL 1233 chr1 84969466 84970372 Char12Mar1_GG 744 - 84969466 84970372 0 2 114,101, 0,805, -,-, 54596 DNA hAT-Charlie 1233 chr1 84996719 84997137 CR1-E 436 + 84996719 84997137 0 2 54,344, 0,74, +,+, 54603 LINE CR1 1233 chr1 85019554 85019963 CR1-C4 684 + 85019554 85019963 0 2 19,111, 0,298, +,+, 54621 LINE CR1 1234 chr1 85132306 85132366 (ACA)n 464 + 85132306 85132366 0 2 8,22, 0,38, +,+, 54687 Simple_repeat Simple_repeat 1234 chr1 85134248 85134746 GGLTR3F2 746 + 85134248 85134746 0 2 238,203, 0,295, +,+, 54690 LTR ERVL 1234 chr1 85182864 85184055 GGLTR8B 589 + 85182864 85184055 0 3 188,144,579, 0,189,612, +,+,+, 54714 LTR ERVL 1235 chr1 85290627 85291826 CR1-F2 446 + 85290627 85291826 0 3 185,275,398, 0,189,801, +,+,+, 54774 LINE CR1 1236 chr1 85331879 85333502 CR1-H2 747 + 85331879 85333502 0 3 79,197,1347, 0,79,276, +,+,+, 54794 LINE CR1 1236 chr1 85368431 85369166 CR1-Y4 701 - 85368431 85369166 0 2 165,570, 0,165, -,-, 54817 LINE CR1 1236 chr1 85369999 85370744 CR1-Y4 535 + 85369999 85370744 0 2 197,208, 0,537, +,+, 54818 LINE CR1 1236 chr1 85384617 85385139 CR1-C4 561 + 85384617 85385139 0 2 292,183, 0,339, +,+, 54830 LINE CR1 1237 chr1 85503681 85510910 CR1-X2 499 + 85503681 85510910 0 3 1103,2154,99, 0,4220,7130, +,+,+, 54871 LINE CR1 1237 chr1 85529220 85532240 CR1-G 840 + 85529220 85532240 0 2 2902,92, 0,2928, +,+, 54898 LINE CR1 1238 chr1 85631912 85632466 CR1-H 849 + 85631912 85632466 0 2 513,29, 0,525, +,+, 54954 LINE CR1 1238 chr1 85689002 85689174 CR1-C 780 + 85689002 85689174 0 2 111,18, 0,154, +,+, 54985 LINE CR1 1239 chr1 85721792 85722252 Char12Mar1_GG 678 - 85721792 85722252 0 2 130,260, 0,200, -,-, 55009 DNA hAT-Charlie 1239 chr1 85772018 85773508 CR1-Y2_Aves 345 + 85772018 85773508 0 2 1366,124, 0,1366, +,+, 55042 LINE CR1 1239 chr1 85803649 85804522 CR1-B2 558 + 85803649 85804522 0 2 97,82, 0,791, +,+, 55060 LINE CR1 1240 chr1 85909526 85910612 CR1-C4 632 - 85909526 85910612 0 2 773,313, 0,773, -,-, 55121 LINE CR1 1240 chr1 85953208 85954154 CR1-D2 638 + 85953208 85954154 0 2 357,589, 0,357, +,+, 55152 LINE CR1 1241 chr1 85995201 85996149 CR1-X2 338 + 85995201 85996149 0 2 477,280, 0,668, +,+, 55178 LINE CR1 1241 chr1 86017156 86017887 UCON84 381 + 86017156 86017887 0 2 230,110, 0,621, +,+, 55192 Unknown Unknown 1241 chr1 86025325 86027147 CR1-C4 595 + 86025325 86027147 0 2 337,1485, 0,337, +,+, 55196 LINE CR1 1241 chr1 86057535 86058469 CR1-X2 217 + 86057535 86058469 0 2 836,98, 0,836, +,+, 55221 LINE CR1 1242 chr1 86160858 86161904 CR1-C4 586 + 86160858 86161904 0 2 850,196, 0,850, +,+, 55282 LINE CR1 1242 chr1 86195254 86195635 GGLTR5A 382 - 86195254 86195635 0 2 219,138, 0,243, -,-, 55312 LTR ERVL 1243 chr1 86302090 86302889 CR1-D2 676 - 86302090 86302889 0 2 671,128, 0,671, -,-, 55379 LINE CR1 1243 chr1 86324366 86326924 CR1-C4 666 + 86324366 86326924 0 2 464,276, 0,2282, +,+, 55389 LINE CR1 1243 chr1 86324839 86326634 CR1-C3 563 - 86324839 86326634 0 2 1444,351, 0,1444, -,-, 55390 LINE CR1 1243 chr1 86352005 86352476 Char12Mar1_GG 695 - 86352005 86352476 0 2 90,41, 0,430, -,-, 55405 DNA hAT-Charlie 1243 chr1 86354520 86355422 CR1-D2 760 - 86354520 86355422 0 2 53,174, 0,728, -,-, 55408 LINE CR1 1244 chr1 86402861 86403636 CR1-Y2_Aves 234 - 86402861 86403636 0 2 315,309, 0,466, -,-, 55435 LINE CR1 1244 chr1 86488779 86490412 CR1-X1 564 - 86488779 86490412 0 2 669,554, 0,1079, -,-, 55486 LINE CR1 1245 chr1 86535441 86535509 (TTCTCT)n 384 + 86535441 86535509 0 2 22,21, 0,47, +,+, 55519 Simple_repeat Simple_repeat 1247 chr1 86811170 86811683 CR1-Y2_Aves 429 + 86811170 86811683 0 2 342,162, 0,351, +,+, 55653 LINE CR1 1248 chr1 86933187 86934668 CR1-Y2_Aves 403 + 86933187 86934668 0 2 175,1281, 0,200, +,+, 55713 LINE CR1 1248 chr1 86962192 86964174 CR1-D2 548 - 86962192 86964174 0 2 122,276, 0,1706, -,-, 55731 LINE CR1 1248 chr1 87005001 87006662 CR1-Y4 641 - 87005001 87006662 0 3 286,344,666, 0,300,995, -,-,-, 55751 LINE CR1 156 chr1 87162595 87163111 GGLTR5A 356 - 87162595 87163111 0 2 83,305, 0,211, -,-, 55830 LTR ERVL 1250 chr1 87181713 87182452 GGLTR8A 360 - 87181713 87182452 0 2 608,129, 0,610, -,-, 55844 LTR ERVL 1251 chr1 87365851 87368702 CR1-X1 571 - 87365851 87368702 0 3 411,178,201, 0,2472,2650, -,-,-, 55941 LINE CR1 1251 chr1 87371691 87372070 CR1-X 564 - 87371691 87372070 0 2 178,201, 0,178, -,-, 55947 LINE CR1 1251 chr1 87375059 87375438 CR1-X 564 - 87375059 87375438 0 2 178,201, 0,178, -,-, 55951 LINE CR1 1251 chr1 87378427 87378806 CR1-X 564 - 87378427 87378806 0 2 178,201, 0,178, -,-, 55955 LINE CR1 1251 chr1 87417412 87417696 CR1-X 390 - 87417412 87417696 0 2 80,192, 0,92, -,-, 55959 LINE CR1 1251 chr1 87420681 87421060 CR1-X 564 - 87420681 87421060 0 2 178,201, 0,178, -,-, 55964 LINE CR1 1251 chr1 87424036 87424415 CR1-X 564 - 87424036 87424415 0 2 178,201, 0,178, -,-, 55968 LINE CR1 1252 chr1 87427404 87427783 CR1-X 564 - 87427404 87427783 0 2 178,201, 0,178, -,-, 55972 LINE CR1 1252 chr1 87430771 87431150 CR1-X 564 - 87430771 87431150 0 2 178,201, 0,178, -,-, 55976 LINE CR1 1252 chr1 87499789 87499989 CR1-E 443 - 87499789 87499989 0 2 95,81, 0,119, -,-, 56010 LINE CR1 1253 chr1 87566802 87567251 CR1-C3 739 - 87566802 87567251 0 2 212,237, 0,212, -,-, 56041 LINE CR1 1253 chr1 87594546 87594925 CR1-X 536 + 87594546 87594925 0 2 207,172, 0,207, +,+, 56058 LINE CR1 1253 chr1 87597914 87598293 CR1-X 536 + 87597914 87598293 0 2 207,172, 0,207, +,+, 56062 LINE CR1 1253 chr1 87672625 87673469 Char12Mar1_GG 646 - 87672625 87673469 0 2 63,496, 0,348, -,-, 56114 DNA hAT-Charlie 1254 chr1 87689960 87691137 CR1-X1 735 - 87689960 87691137 0 2 52,282, 0,895, -,-, 56126 LINE CR1 1254 chr1 87697909 87698205 CR1-X2 660 - 87697909 87698205 0 2 142,154, 0,142, -,-, 56131 LINE CR1 1254 chr1 87698248 87698525 CR1-X 780 - 87698248 87698525 0 2 220,45, 0,232, -,-, 56132 LINE CR1 1254 chr1 87698524 87699955 GGERVL18-int 698 + 87698524 87699955 0 2 1182,245, 0,1186, +,+, 56133 LTR ERVL 1254 chr1 87716675 87718131 CR1-C3 671 - 87716675 87718131 0 2 490,966, 0,490, -,-, 56145 LINE CR1 1254 chr1 87733213 87733400 CR1-X2 566 + 87733213 87733400 0 2 106,81, 0,106, +,+, 56151 LINE CR1 1254 chr1 87745762 87746476 CR1-X2 249 + 87745762 87746476 0 2 562,137, 0,577, +,+, 56157 LINE CR1 1254 chr1 87749344 87750312 GGLTR8B 278 - 87749344 87750312 0 2 245,325, 0,643, -,-, 56158 LTR ERVL 1254 chr1 87759135 87759762 CR1-X1 686 - 87759135 87759762 0 2 134,493, 0,134, -,-, 56166 LINE CR1 1255 chr1 87865467 87867516 CR1-L3B_Croc 125 - 87865467 87867516 0 3 347,334,375, 0,1329,1674, -,-,-, 56223 LINE CR1 1255 chr1 87905634 87905740 (T)n 872 + 87905634 87905740 0 2 20,43, 0,63, +,+, 56247 Simple_repeat Simple_repeat 1256 chr1 88036874 88037795 CR1-F2 390 + 88036874 88037795 0 2 712,209, 0,712, +,+, 56324 LINE CR1 1256 chr1 88055777 88056689 CR1-X2 279 - 88055777 88056689 0 2 102,679, 0,233, -,-, 56337 LINE CR1 1256 chr1 88058115 88059156 Mariner1_GG 550 - 88058115 88059156 0 2 301,737, 0,304, -,-, 56338 DNA TcMar-Mariner 1257 chr1 88108236 88109222 CR1-C2 767 - 88108236 88109222 0 2 768,213, 0,773, -,-, 56361 LINE CR1 1257 chr1 88117680 88118572 CR1-D2 434 - 88117680 88118572 0 2 100,792, 0,100, -,-, 56364 LINE CR1 1257 chr1 88154625 88156070 CR1-D2 525 - 88154625 88156070 0 2 270,884, 0,561, -,-, 56377 LINE CR1 1257 chr1 88176930 88176996 A-rich 430 + 88176930 88176996 0 2 20,26, 0,40, +,+, 56384 Low_complexity Low_complexity 1257 chr1 88203781 88204660 Char12Mar1_GG 343 - 88203781 88204660 0 2 716,163, 0,716, -,-, 56399 DNA hAT-Charlie 1258 chr1 88233570 88233705 G-rich 594 + 88233570 88233705 0 2 41,74, 0,61, +,+, 56414 Low_complexity Low_complexity 1258 chr1 88242254 88242634 CR1-F0 308 + 88242254 88242634 0 2 239,99, 0,281, +,+, 56419 LINE CR1 1258 chr1 88298471 88299069 CR1-Y2_Aves 200 - 88298471 88299069 0 2 195,294, 0,304, -,-, 56433 LINE CR1 1258 chr1 88314908 88315393 CR1-Y4 520 - 88314908 88315393 0 2 263,222, 0,263, -,-, 56439 LINE CR1 1259 chr1 88407282 88407788 CR1-X2 446 + 88407282 88407788 0 2 148,60, 0,446, +,+, 56488 LINE CR1 1260 chr1 88554898 88558998 CR1-X1 563 + 88554898 88558998 0 2 55,74, 0,4026, +,+, 56544 LINE CR1 1260 chr1 88555354 88555935 GGERVL-A-int 397 - 88555354 88555935 0 2 317,264, 0,317, -,-, 56545 LTR ERVL 1260 chr1 88559279 88559335 (GGCGGT)n 370 + 88559279 88559335 0 2 12,13, 0,43, +,+, 56547 Simple_repeat Simple_repeat 1260 chr1 88571111 88571783 CR1-L3A_Croc 201 - 88571111 88571783 0 2 110,170, 0,502, -,-, 56553 LINE CR1 1261 chr1 88726054 88726168 (TTTCTT)n 314 + 88726054 88726168 0 2 45,7, 0,107, +,+, 56653 Simple_repeat Simple_repeat 1262 chr1 88771780 88772251 CR1-F2 446 + 88771780 88772251 0 2 270,66, 0,405, +,+, 56674 LINE CR1 1263 chr1 88882596 88882998 GGLTR5B 754 + 88882596 88882998 0 2 359,43, 0,359, +,+, 56718 LTR ERVL 1264 chr1 89029236 89030187 CR1-C4 606 + 89029236 89030187 0 2 505,446, 0,505, +,+, 56803 LINE CR1 1264 chr1 89098872 89099412 CR1-11_Crp 285 - 89098872 89099412 0 2 96,187, 0,353, -,-, 56844 LINE CR1 1264 chr1 89111446 89111821 CR1-X2 564 + 89111446 89111821 0 2 58,255, 0,120, +,+, 56851 LINE CR1 1264 chr1 89114151 89114184 (TTATAA)n 570 + 89114151 89114184 0 2 7,7, 0,26, +,+, 56853 Simple_repeat Simple_repeat 1265 chr1 89226054 89226350 Mariner1b_GG 658 - 89226054 89226350 0 2 179,114, 0,182, -,-, 56924 DNA TcMar-Mariner 1266 chr1 89293754 89294270 CR1-Y2 672 - 89293754 89294270 0 2 51,48, 0,468, -,-, 56949 LINE CR1 1267 chr1 89428360 89429353 CR1-F2 494 + 89428360 89429353 0 2 582,411, 0,582, +,+, 57016 LINE CR1 1268 chr1 89535899 89536273 CR1-X 542 + 89535899 89536273 0 2 207,167, 0,207, +,+, 57044 LINE CR1 1268 chr1 89539269 89539648 CR1-X 559 + 89539269 89539648 0 2 207,172, 0,207, +,+, 57048 LINE CR1 1268 chr1 89542655 89543034 CR1-X 559 + 89542655 89543034 0 2 207,172, 0,207, +,+, 57052 LINE CR1 1268 chr1 89545850 89547116 CR1-L3B_Croc 178 - 89545850 89547116 0 2 206,605, 0,661, -,-, 57056 LINE CR1 1270 chr1 89811489 89813689 CR1-L3B_Croc 357 + 89811489 89813689 0 3 69,188,433, 0,543,1767, +,+,+, 57217 LINE CR1 1270 chr1 89821278 89825169 CR1-X2 482 - 89821278 89825169 0 2 152,812, 0,3079, -,-, 57219 LINE CR1 1270 chr1 89840896 89841738 CR1-Y2_Aves 241 + 89840896 89841738 0 3 309,268,141, 0,374,701, +,+,+, 57233 LINE CR1 1270 chr1 89847629 89848196 CR1-X2 683 - 89847629 89848196 0 2 502,65, 0,502, -,-, 57240 LINE CR1 1270 chr1 89848197 89849441 CR1-X 574 + 89848197 89849441 0 2 397,845, 0,399, +,+, 57241 LINE CR1 1270 chr1 89850485 89851328 CR1-D2 632 - 89850485 89851328 0 2 678,165, 0,678, -,-, 57244 LINE CR1 1270 chr1 89866029 89866496 GGLTR5A 259 + 89866029 89866496 0 2 311,118, 0,349, +,+, 57253 LTR ERVL 1270 chr1 89901372 89902737 CR1-C4 603 - 89901372 89902737 0 2 918,447, 0,918, -,-, 57280 LINE CR1 1270 chr1 89909083 89909916 CR1-Y4 570 - 89909083 89909916 0 2 694,139, 0,694, -,-, 57286 LINE CR1 1271 chr1 89928667 89929742 CR1-C4 565 + 89928667 89929742 0 2 458,615, 0,460, +,+, 57301 LINE CR1 1272 chr1 90061678 90062836 Mariner1_GG 590 - 90061678 90062836 0 2 1022,136, 0,1022, -,-, 57382 DNA TcMar-Mariner 1272 chr1 90089757 90091863 CR1-C4 591 + 90089757 90091863 0 2 81,96, 0,2010, +,+, 57410 LINE CR1 1272 chr1 90155605 90156809 Char12Mar1_GG 620 - 90155605 90156809 0 2 74,473, 0,731, -,-, 57470 DNA hAT-Charlie 1272 chr1 90155683 90156335 CR1-Y 722 - 90155683 90156335 0 2 296,314, 0,338, -,-, 57471 LINE CR1 1272 chr1 90165181 90165268 (T)n 955 + 90165181 90165268 0 2 19,23, 0,64, +,+, 57481 Simple_repeat Simple_repeat 1272 chr1 90166636 90167528 CR1-C2 771 + 90166636 90167528 0 2 775,117, 0,775, +,+, 57482 LINE CR1 1273 chr1 90202994 90205321 GGERVL18-int 511 - 90202994 90205321 0 2 276,402, 0,1925, -,-, 57507 LTR ERVL 1274 chr1 90361491 90362705 GGLTR11-int 374 + 90361491 90362705 0 2 128,513, 0,701, +,+, 57629 LTR ERV1 1274 chr1 90363681 90363993 CR1-C4 579 + 90363681 90363993 0 2 160,152, 0,160, +,+, 57631 LINE CR1 1275 chr1 90468984 90469048 (TTTAT)n 380 + 90468984 90469048 0 2 17,7, 0,57, +,+, 57695 Simple_repeat Simple_repeat 1275 chr1 90475481 90477488 CR1-Y2_Aves 313 + 90475481 90477488 0 2 175,1832, 0,175, +,+, 57702 LINE CR1 1275 chr1 90493788 90493859 (TGTTTAC)n 338 + 90493788 90493859 0 2 18,17, 0,54, +,+, 57715 Simple_repeat Simple_repeat 1276 chr1 90573302 90574191 GGLTR12C 650 - 90573302 90574191 0 2 215,657, 0,232, -,-, 57770 LTR ERVL 1276 chr1 90600289 90600587 AmnSINE1 214 + 90600289 90600587 0 2 148,138, 0,160, +,+, 57786 SINE 5S-Deu-L2 1276 chr1 90625156 90627030 CR1-H 721 - 90625156 90627030 0 2 1436,438, 0,1436, -,-, 57805 LINE CR1 1276 chr1 90627070 90627141 (TATACA)n 460 + 90627070 90627141 0 2 22,18, 0,53, +,+, 57806 Simple_repeat Simple_repeat 1276 chr1 90670771 90671154 CR1-Y4 645 + 90670771 90671154 0 2 120,263, 0,120, +,+, 57837 LINE CR1 1276 chr1 90689838 90691199 CR1-C4 556 - 90689838 90691199 0 2 680,681, 0,680, -,-, 57845 LINE CR1 1277 chr1 90757897 90760616 CR1-X 167 + 90757897 90760616 0 2 224,1802, 0,917, +,+, 57899 LINE CR1 1277 chr1 90765748 90766215 TguLTR5e 265 - 90765748 90766215 0 2 118,333, 0,134, -,-, 57905 LTR ERVL 1277 chr1 90781379 90782340 CR1-Y2_Aves 127 - 90781379 90782340 0 3 433,210,278, 0,469,683, -,-,-, 57911 LINE CR1 1277 chr1 90822590 90824276 CR1-D2 473 + 90822590 90824276 0 2 289,1397, 0,289, +,+, 57936 LINE CR1 1277 chr1 90830610 90832621 CR1-E 591 + 90830610 90832621 0 2 540,1468, 0,543, +,+, 57939 LINE CR1 1278 chr1 90839999 90840646 CR1-X 461 + 90839999 90840646 0 2 92,551, 0,96, +,+, 57950 LINE CR1 1278 chr1 90897767 90897822 (TATTTT)n 404 + 90897767 90897822 0 2 11,11, 0,44, +,+, 57986 Simple_repeat Simple_repeat 1279 chr1 91016499 91017227 CR1-Y2_Aves 186 - 91016499 91017227 0 2 271,381, 0,347, -,-, 58051 LINE CR1 1279 chr1 91041153 91041554 CR1-X1 588 + 91041153 91041554 0 2 154,247, 0,154, +,+, 58064 LINE CR1 1280 chr1 91110388 91111984 CR1-D 657 - 91110388 91111984 0 2 1133,460, 0,1136, -,-, 58094 LINE CR1 1280 chr1 91216604 91218334 CR1-F2 438 + 91216604 91218334 0 2 910,804, 0,926, +,+, 58153 LINE CR1 1282 chr1 91372881 91373387 CR1-L3A_Croc 273 + 91372881 91373387 0 2 83,288, 0,218, +,+, 58207 LINE CR1 1282 chr1 91398099 91399125 CR1-X2 267 - 91398099 91399125 0 2 877,138, 0,888, -,-, 58216 LINE CR1 1282 chr1 91472554 91474967 CR1-C4 438 - 91472554 91474967 0 2 1637,776, 0,1637, -,-, 58241 LINE CR1 1284 chr1 91732400 91733030 CR1-C4 621 + 91732400 91733030 0 2 456,174, 0,456, +,+, 58380 LINE CR1 1285 chr1 91782149 91782419 X1_LINE 500 + 91782149 91782419 0 2 120,99, 0,171, +,+, 58401 LINE CR1 1285 chr1 91802947 91804244 CR1-F2 612 + 91802947 91804244 0 2 811,136, 0,1161, +,+, 58418 LINE CR1 1285 chr1 91820511 91821046 CR1-Y2_Aves 161 - 91820511 91821046 0 2 219,170, 0,365, -,-, 58426 LINE CR1 1285 chr1 91835744 91837621 CR1-L3A_Croc 264 + 91835744 91837621 0 2 104,231, 0,1646, +,+, 58430 LINE CR1 1285 chr1 91876699 91877530 CR1-C4 646 - 91876699 91877530 0 2 622,204, 0,627, -,-, 58453 LINE CR1 1286 chr1 91881509 91881619 CR1-X1 617 - 91881509 91881619 0 2 45,60, 0,50, -,-, 58456 LINE CR1 1286 chr1 91903933 91905380 GGERVL-A-int 292 - 91903933 91905380 0 3 139,896,179, 0,139,1268, -,-,-, 58473 LTR ERVL 1286 chr1 91910221 91912140 CR1-D2 633 - 91910221 91912140 0 2 225,1115, 0,804, -,-, 58476 LINE CR1 1286 chr1 91915609 91919658 CR1-X1 500 + 91915609 91919658 0 2 22,350, 0,3699, +,+, 58481 LINE CR1 1286 chr1 91993922 91994015 (GCGG)n 666 + 91993922 91994015 0 2 27,35, 0,58, +,+, 58527 Simple_repeat Simple_repeat 1287 chr1 92092502 92094679 CR1-F2 545 + 92092502 92094679 0 3 84,448,463, 0,84,1714, +,+,+, 58580 LINE CR1 1287 chr1 92096698 92099251 CR1-B2 614 - 92096698 92099251 0 2 242,711, 0,1842, -,-, 58583 LINE CR1 1288 chr1 92191124 92191506 CR1-C4 674 - 92191124 92191506 0 2 78,304, 0,78, -,-, 58625 LINE CR1 1289 chr1 92315384 92315914 CR1-Y2_Aves 367 + 92315384 92315914 0 2 217,308, 0,222, +,+, 58682 LINE CR1 1289 chr1 92339188 92339667 AmnSINE1 277 + 92339188 92339667 0 2 194,210, 0,269, +,+, 58696 SINE 5S-Deu-L2 1290 chr1 92442211 92443461 CR1-11_Crp 217 + 92442211 92443461 0 2 715,345, 0,905, +,+, 58741 LINE CR1 1290 chr1 92444350 92445067 GGLTR8A 645 + 92444350 92445067 0 2 342,354, 0,363, +,+, 58742 LTR ERVL 1290 chr1 92475727 92477013 CR1-3_Croc 154 - 92475727 92477013 0 2 500,286, 0,1000, -,-, 58767 LINE CR1 1290 chr1 92478036 92479244 CR1-E 487 - 92478036 92479244 0 2 1082,126, 0,1082, -,-, 58769 LINE CR1 1290 chr1 92522984 92523785 CR1-Y2_Aves 214 + 92522984 92523785 0 2 466,335, 0,466, +,+, 58801 LINE CR1 1290 chr1 92525350 92525630 GGERVL-B-int 318 + 92525350 92525630 0 2 91,172, 0,108, +,+, 58803 LTR ERVL 1290 chr1 92532194 92532671 CR1-F2 621 + 92532194 92532671 0 2 149,328, 0,149, +,+, 58809 LINE CR1 1291 chr1 92549915 92550705 CR1-B2 743 + 92549915 92550705 0 2 592,118, 0,672, +,+, 58820 LINE CR1 1291 chr1 92611551 92612427 GGLTR5A 427 + 92611551 92612427 0 2 306,159, 0,717, +,+, 58861 LTR ERVL 1291 chr1 92631632 92631853 CR1-F2 622 - 92631632 92631853 0 2 110,48, 0,173, -,-, 58874 LINE CR1 1291 chr1 92634072 92635251 CR1-C4 613 + 92634072 92635251 0 2 580,598, 0,581, +,+, 58876 LINE CR1 1292 chr1 92726059 92726242 CR1-C3 612 - 92726059 92726242 0 2 60,77, 0,106, -,-, 58934 LINE CR1 1292 chr1 92765641 92768179 CR1-F 826 - 92765641 92768179 0 2 1359,1179, 0,1359, -,-, 58960 LINE CR1 1292 chr1 92768252 92768561 CR1-X 523 - 92768252 92768561 0 2 91,214, 0,95, -,-, 58961 LINE CR1 1292 chr1 92771364 92772958 CR1-F2 508 + 92771364 92772958 0 2 1501,93, 0,1501, +,+, 58965 LINE CR1 1292 chr1 92783067 92788121 GGLTR7-int 205 + 92783067 92788121 0 4 231,251,677,287, 0,3007,3822,4767, +,+,+,+, 58968 LTR ERV1 1292 chr1 92793531 92793943 CR1-C3 708 - 92793531 92793943 0 2 333,79, 0,333, -,-, 58981 LINE CR1 1293 chr1 92862414 92864035 CR1-B2 668 - 92862414 92864035 0 2 1043,578, 0,1043, -,-, 59048 LINE CR1 1293 chr1 92883332 92883956 CR1-X 578 - 92883332 92883956 0 2 410,203, 0,421, -,-, 59061 LINE CR1 1293 chr1 92927217 92928479 GGERVL-B-int 819 - 92927217 92928479 0 2 586,676, 0,586, -,-, 59090 LTR ERVL 1294 chr1 93027385 93030426 CR1-G 829 - 93027385 93030426 0 2 1814,735, 0,2306, -,-, 59160 LINE CR1 1295 chr1 93127017 93129280 CR1-F 414 - 93127017 93129280 0 2 1844,387, 0,1876, -,-, 59241 LINE CR1 1295 chr1 93175757 93176130 GGERVL18-LTR 500 + 93175757 93176130 0 2 206,136, 0,237, +,+, 59272 LTR ERVL 1296 chr1 93214527 93214889 GGERV21_LTR 763 - 93214527 93214889 0 2 116,159, 0,203, -,-, 59306 LTR ERVL 1296 chr1 93264791 93271155 GGERVL18-int 661 + 93264791 93271155 0 4 241,566,4816,312, 0,321,1236,6052, +,+,+,+, 59352 LTR ERVL 1296 chr1 93285049 93286584 CR1-Y2_Aves 194 + 93285049 93286584 0 2 206,93, 0,1442, +,+, 59369 LINE CR1 1297 chr1 93370946 93372605 CR1-F 924 - 93370946 93372605 0 2 546,504, 0,1155, -,-, 59436 LINE CR1 1298 chr1 93471159 93472142 CR1-C4 611 + 93471159 93472142 0 3 520,259,193, 0,531,790, +,+,+, 59508 LINE CR1 1298 chr1 93473160 93474017 CR1-Y2_Aves 499 + 93473160 93474017 0 3 102,87,67, 0,102,790, +,+,+, 59511 LINE CR1 1298 chr1 93493075 93495342 CR1-E 697 + 93493075 93495342 0 2 809,862, 0,1405, +,+, 59525 LINE CR1 1298 chr1 93493897 93494480 GGLTR11 595 - 93493897 93494480 0 2 483,62, 0,521, -,-, 59526 LTR ERV1 1298 chr1 93526120 93527076 CR1-L3A_Croc 371 - 93526120 93527076 0 2 351,172, 0,784, -,-, 59557 LINE CR1 1299 chr1 93592915 93593597 Char12Mar1_GG 678 - 93592915 93593597 0 2 102,274, 0,408, -,-, 59610 DNA hAT-Charlie 1299 chr1 93647503 93648626 CR1-G 795 + 93647503 93648626 0 2 74,1049, 0,74, +,+, 59661 LINE CR1 1300 chr1 93734277 93734347 (TCCTTTT)n 354 + 93734277 93734347 0 2 40,6, 0,64, +,+, 59733 Simple_repeat Simple_repeat 1300 chr1 93757784 93758088 Char12Mar1_GG 589 - 93757784 93758088 0 2 215,89, 0,215, -,-, 59751 DNA hAT-Charlie 1300 chr1 93791083 93791918 UCON1 277 + 93791083 93791918 0 2 101,111, 0,724, +,+, 59777 Unknown Unknown 1300 chr1 93835653 93836164 CR1-C4 450 + 93835653 93836164 0 2 205,306, 0,205, +,+, 59804 LINE CR1 1301 chr1 93853545 93854135 GGLTR3C2 433 - 93853545 93854135 0 2 120,469, 0,121, -,-, 59821 LTR ERVL 1301 chr1 93876746 93877858 CR1-Y 448 - 93876746 93877858 0 2 168,154, 0,958, -,-, 59840 LINE CR1 1301 chr1 93901604 93903378 CR1-G 812 - 93901604 93903378 0 2 1527,247, 0,1527, -,-, 59863 LINE CR1 1301 chr1 93903435 93905457 CR1-D2 567 - 93903435 93905457 0 2 363,401, 0,1621, -,-, 59864 LINE CR1 1301 chr1 93920859 93921273 REP131 292 - 93920859 93921273 0 2 221,117, 0,297, -,-, 59872 DNA? DNA? 1301 chr1 93922588 93924642 CR1-C4 512 - 93922588 93924642 0 2 18,1908, 0,146, -,-, 59873 LINE CR1 1301 chr1 93938165 93938914 CR1-D 143 + 93938165 93938914 0 2 244,244, 0,505, +,+, 59882 LINE CR1 1302 chr1 94039565 94041577 CR1-F 519 - 94039565 94041577 0 2 1272,330, 0,1682, -,-, 59970 LINE CR1 1302 chr1 94055388 94055996 CR1-C3 595 - 94055388 94055996 0 2 396,212, 0,396, -,-, 59982 LINE CR1 1302 chr1 94103083 94105626 CR1-F2 425 + 94103083 94105626 0 2 2015,527, 0,2016, +,+, 60023 LINE CR1 1303 chr1 94113927 94114300 CR1-E 462 + 94113927 94114300 0 2 226,109, 0,264, +,+, 60033 LINE CR1 1303 chr1 94177330 94178693 CR1-H 752 + 94177330 94178693 0 2 341,1022, 0,341, +,+, 60091 LINE CR1 1303 chr1 94178716 94181542 GGERVL18-int 434 - 94178716 94181542 0 5 333,427,88,509,1266, 0,333,760,848,1560, -,-,-,-,-, 60092 LTR ERVL 1303 chr1 94193043 94193945 CR1-D2 592 + 94193043 94193945 0 4 260,196,196,159, 0,260,547,743, +,+,+,+, 60104 LINE CR1 1303 chr1 94214225 94214761 GGLTR8B 287 - 94214225 94214761 0 2 145,321, 0,215, -,-, 60125 LTR ERVL 1303 chr1 94238771 94238823 (TTTTTTC)n 644 + 94238771 94238823 0 2 9,17, 0,35, +,+, 60146 Simple_repeat Simple_repeat 1304 chr1 94247689 94248335 GGLTR8A 134 + 94247689 94248335 0 2 306,267, 0,379, +,+, 60155 LTR ERVL 1304 chr1 94272254 94273009 CR1-Y4 445 + 94272254 94273009 0 2 163,343, 0,412, +,+, 60175 LINE CR1 1304 chr1 94285518 94287429 CR1-Y2_Aves 100 - 94285518 94287429 0 2 867,277, 0,1634, -,-, 60189 LINE CR1 1304 chr1 94358322 94360840 CR1-F2 571 - 94358322 94360840 0 2 632,1883, 0,635, -,-, 60255 LINE CR1 1305 chr1 94373022 94373345 GGERV10_LTR 661 + 94373022 94373345 0 2 62,158, 0,165, +,+, 60262 LTR ERVL 1305 chr1 94375739 94377660 GGERVL18-int 669 + 94375739 94377660 0 2 280,1591, 0,330, +,+, 60264 LTR ERVL 1305 chr1 94400036 94401102 Char12Mar1_GG 516 - 94400036 94401102 0 2 34,166, 0,900, -,-, 60282 DNA hAT-Charlie 1305 chr1 94403974 94405489 CR1-H2 861 - 94403974 94405489 0 2 538,977, 0,538, -,-, 60291 LINE CR1 1305 chr1 94428863 94428931 (TTTG)n 446 + 94428863 94428931 0 2 17,23, 0,45, +,+, 60306 Simple_repeat Simple_repeat 1306 chr1 94509946 94510238 CR1-Y1_Aves 544 - 94509946 94510238 0 2 240,52, 0,240, -,-, 60365 LINE CR1 1306 chr1 94515062 94523694 Char12Mar1_GG 678 - 94515062 94523694 0 2 136,423, 0,8209, -,-, 60367 DNA hAT-Charlie 1306 chr1 94518830 94520079 CR1-G 230 + 94518830 94520079 0 2 244,990, 0,259, +,+, 60372 LINE CR1 1306 chr1 94549199 94549982 GGLTR12C 473 + 94549199 94549982 0 2 112,334, 0,449, +,+, 60402 LTR ERVL 1306 chr1 94559184 94559591 GGLTR5B 260 - 94559184 94559591 0 2 174,158, 0,249, -,-, 60412 LTR ERVL 1306 chr1 94569714 94569827 (TTTT)n 344 + 94569714 94569827 0 2 58,38, 0,75, +,+, 60423 Simple_repeat Simple_repeat 1306 chr1 94583758 94587734 ENS3-int 435 + 94583758 94587734 0 3 759,145,368, 0,767,3608, +,+,+, 60429 LTR ERVL 1306 chr1 94584576 94587360 ENS1-int 362 + 94584576 94587360 0 2 1323,980, 0,1804, +,+, 60430 LTR ERVL 1306 chr1 94589031 94590730 CR1-E 655 - 94589031 94590730 0 2 818,301, 0,1398, -,-, 60433 LINE CR1 1306 chr1 94599484 94600195 CR1-Y1_Aves 330 - 94599484 94600195 0 2 633,64, 0,647, -,-, 60439 LINE CR1 1306 chr1 94625720 94626331 GGLTR3G1 602 - 94625720 94626331 0 2 49,199, 0,412, -,-, 60465 LTR ERVL 1306 chr1 94626822 94631455 GGLTR3G1 760 - 94626822 94631455 0 2 321,4312, 0,321, -,-, 60469 LTR ERVL 1307 chr1 94689856 94689935 (TTGTT)n 416 + 94689856 94689935 0 2 21,7, 0,72, +,+, 60521 Simple_repeat Simple_repeat 1307 chr1 94702434 94702513 (TTGTT)n 416 + 94702434 94702513 0 2 21,7, 0,72, +,+, 60532 Simple_repeat Simple_repeat 1307 chr1 94737800 94738801 CR1-Y4 535 + 94737800 94738801 0 2 529,284, 0,717, +,+, 60569 LINE CR1 1307 chr1 94752725 94753066 GGERV10_LTR 512 + 94752725 94753066 0 2 79,171, 0,170, +,+, 60582 LTR ERVL 1308 chr1 94798450 94798702 CR1-E 723 + 94798450 94798702 0 2 161,91, 0,161, +,+, 60618 LINE CR1 1308 chr1 94820003 94820663 CR1-C4 611 - 94820003 94820663 0 2 377,111, 0,549, -,-, 60631 LINE CR1 1308 chr1 94820740 94824239 CR1-G 775 - 94820740 94824239 0 2 1926,1046, 0,2453, -,-, 60633 LINE CR1 1308 chr1 94849812 94851191 CR1-F 922 - 94849812 94851191 0 2 542,229, 0,1150, -,-, 60656 LINE CR1 1308 chr1 94859713 94860341 CR1-Y2_Aves 201 + 94859713 94860341 0 2 407,219, 0,409, +,+, 60667 LINE CR1 1309 chr1 94919261 94920328 CR1-X1 223 + 94919261 94920328 0 2 602,441, 0,626, +,+, 60723 LINE CR1 1309 chr1 94921453 94923592 Charlie7_Aves 443 - 94921453 94923592 0 3 449,362,540, 0,683,1599, -,-,-, 60726 DNA hAT-Charlie 1309 chr1 94924963 94925387 CR1-Y2_Aves 202 + 94924963 94925387 0 2 266,130, 0,294, +,+, 60732 LINE CR1 1309 chr1 94931746 94932700 CR1-F2 593 + 94931746 94932700 0 2 455,493, 0,461, +,+, 60743 LINE CR1 1309 chr1 94961327 94961568 CR1-C4 519 + 94961327 94961568 0 2 189,52, 0,189, +,+, 60773 LINE CR1 1310 chr1 95039502 95039995 AmnSINE1 178 - 95039502 95039995 0 2 229,93, 0,400, -,-, 60822 SINE 5S-Deu-L2 1310 chr1 95046390 95047555 CR1-Y2_Aves 140 + 95046390 95047555 0 2 913,238, 0,927, +,+, 60829 LINE CR1 1310 chr1 95156146 95157766 CR1-D 703 - 95156146 95157766 0 2 161,1459, 0,161, -,-, 60909 LINE CR1 1311 chr1 95160198 95161417 CR1-H 820 - 95160198 95161417 0 2 547,672, 0,547, -,-, 60915 LINE CR1 1311 chr1 95175521 95175854 GGERV10_LTR 716 + 95175521 95175854 0 2 85,159, 0,174, +,+, 60929 LTR ERVL 1311 chr1 95186100 95186721 CR1-Y2_Aves 225 + 95186100 95186721 0 2 317,302, 0,319, +,+, 60938 LINE CR1 1311 chr1 95211617 95220407 Char12Mar1_GG 554 - 95211617 95220407 0 2 558,834, 0,7956, -,-, 60952 DNA hAT-Charlie 1311 chr1 95244890 95245216 Char12Mar1_GG 520 - 95244890 95245216 0 2 144,162, 0,164, -,-, 60979 DNA hAT-Charlie 1311 chr1 95258479 95260937 CR1-C3 629 + 95258479 95260937 0 3 124,194,2140, 0,124,318, +,+,+, 60990 LINE CR1 1312 chr1 95295197 95295521 TguLTR5e 484 + 95295197 95295521 0 2 200,101, 0,223, +,+, 61014 LTR ERVL 1312 chr1 95315546 95317225 GGLTR8A 413 - 95315546 95317225 0 4 105,319,79,74, 0,105,1192,1605, -,-,-,-, 61025 LTR ERVL 1312 chr1 95353085 95353185 (T)n 639 + 95353085 95353185 0 2 38,31, 0,69, +,+, 61055 Simple_repeat Simple_repeat 1313 chr1 95439128 95439560 CR1-D2 450 + 95439128 95439560 0 2 128,304, 0,128, +,+, 61140 LINE CR1 1313 chr1 95479508 95481882 Char12Mar1_GG 451 - 95479508 95481882 0 3 693,380,293, 0,825,2081, -,-,-, 61174 DNA hAT-Charlie 1313 chr1 95483002 95483614 CR1-L3B_Croc 169 - 95483002 95483614 0 2 198,221, 0,391, -,-, 61177 LINE CR1 1313 chr1 95484883 95486416 GGERV20_I-int 369 + 95484883 95486416 0 2 266,1243, 0,290, +,+, 61181 LTR ERVL 1313 chr1 95507217 95507424 CR1-Y2_Aves 196 . 95507217 95507424 0 2 127,80, 0,127, -,+, 61202 LINE CR1 1314 chr1 95589256 95589936 CR1-C4 485 + 95589256 95589936 0 2 245,435, 0,245, +,+, 61272 LINE CR1 1314 chr1 95612735 95614125 CR1-F2 620 - 95612735 95614125 0 2 307,1083, 0,307, -,-, 61290 LINE CR1 1314 chr1 95615296 95615691 Char12Mar1_GG 630 - 95615296 95615691 0 2 142,246, 0,149, -,-, 61291 DNA hAT-Charlie 1314 chr1 95621682 95622102 GGLTR5A 394 + 95621682 95622102 0 2 272,110, 0,310, +,+, 61296 LTR ERVL 1314 chr1 95627260 95629525 TguLTR5e 412 + 95627260 95629525 0 2 99,402, 0,1863, +,+, 61301 LTR ERVL 1314 chr1 95636390 95637986 CR1-X 363 - 95636390 95637986 0 3 336,409,129, 0,1058,1467, -,-,-, 61305 LINE CR1 1314 chr1 95680186 95680386 (TATGCA)n 192 + 95680186 95680386 0 2 20,152, 0,48, +,+, 61342 Simple_repeat Simple_repeat 1314 chr1 95680466 95680818 CR1-D2 526 - 95680466 95680818 0 2 73,266, 0,86, -,-, 61344 LINE CR1 1315 chr1 95683671 95685003 CR1-D2 662 + 95683671 95685003 0 2 825,507, 0,825, +,+, 61349 LINE CR1 1315 chr1 95697785 95698692 GGLTR5B 427 + 95697785 95698692 0 2 189,251, 0,656, +,+, 61359 LTR ERVL 1315 chr1 95748149 95749279 Mariner1_GG 479 - 95748149 95749279 0 2 935,195, 0,935, -,-, 61401 DNA TcMar-Mariner 1315 chr1 95754525 95755083 CR1-F2 281 + 95754525 95755083 0 2 359,199, 0,359, +,+, 61407 LINE CR1 1315 chr1 95756202 95757146 CR1-F2 622 + 95756202 95757146 0 2 306,636, 0,308, +,+, 61409 LINE CR1 1316 chr1 95825720 95825935 Eulor9C 566 . 95825720 95825935 0 2 96,108, 0,107, -,+, 61470 DNA DNA 1317 chr1 95980603 95981767 CR1-Y2_Aves 319 - 95980603 95981767 0 2 609,540, 0,624, -,-, 61594 LINE CR1 1318 chr1 96090447 96091882 CR1-F0 391 + 96090447 96091882 0 3 156,769,510, 0,156,925, +,+,+, 61674 LINE CR1 1318 chr1 96092766 96093991 CR1-Y1_Aves 523 + 96092766 96093991 0 2 142,176, 0,1049, +,+, 61675 LINE CR1 1318 chr1 96092904 96093817 CR1-C4 640 - 96092904 96093817 0 2 638,275, 0,638, -,-, 61676 LINE CR1 164 chr1 96331936 96339453 Char12Mar1_GG 548 - 96331936 96339453 0 2 562,59, 0,7458, -,-, 61816 DNA hAT-Charlie 1320 chr1 96444967 96445452 CR1-C4 651 - 96444967 96445452 0 2 154,331, 0,154, -,-, 61919 LINE CR1 1322 chr1 96604867 96604971 (T)n 729 + 96604867 96604971 0 2 24,31, 0,73, +,+, 62045 Simple_repeat Simple_repeat 1322 chr1 96642802 96643305 CR1-H2 211 + 96642802 96643305 0 2 244,248, 0,255, +,+, 62077 LINE CR1 1322 chr1 96661074 96671190 Charlie12_GGa 591 - 96661074 96671190 0 3 50,333,195, 0,8923,9921, -,-,-, 62091 DNA hAT-Charlie 1322 chr1 96662488 96664472 Charlie12_GG 486 - 96662488 96664472 0 2 1667,292, 0,1692, -,-, 62093 DNA hAT-Charlie 1322 chr1 96670330 96670994 GGLTR3B3 686 + 96670330 96670994 0 2 454,45, 0,619, +,+, 62099 LTR ERVL 1322 chr1 96714816 96715366 CR1-Y2_Aves 324 + 96714816 96715366 0 2 372,163, 0,387, +,+, 62129 LINE CR1 1323 chr1 96771190 96772826 CR1-E 729 - 96771190 96772826 0 2 894,742, 0,894, -,-, 62177 LINE CR1 1323 chr1 96799518 96799558 (TGTATGTG)n 586 + 96799518 96799558 0 2 11,8, 0,32, +,+, 62204 Simple_repeat Simple_repeat 1323 chr1 96809407 96812406 EAVHP_I-int 748 + 96809407 96812406 0 3 1010,1653,313, 0,1031,2686, +,+,+, 62216 LTR ERVK 1323 chr1 96815746 96816026 CR1-Y2_Aves 484 - 96815746 96816026 0 2 236,44, 0,236, -,-, 62218 LINE CR1 1324 chr1 96900618 96902330 CR1-C4 586 + 96900618 96902330 0 4 493,1117,64,36, 0,495,1612,1676, +,+,+,+, 62286 LINE CR1 1325 chr1 97012073 97013476 CR1-Y4 329 + 97012073 97013476 0 3 114,114,1155, 0,134,248, +,+,+, 62344 LINE CR1 1325 chr1 97039149 97039827 REP131 58 - 97039149 97039827 0 2 355,298, 0,380, -,-, 62363 DNA? DNA? 1325 chr1 97060445 97062443 Mariner1_GG 622 - 97060445 97062443 0 2 414,872, 0,1126, -,-, 62376 DNA TcMar-Mariner 1326 chr1 97130136 97130377 CR1-D 459 + 97130136 97130377 0 2 159,82, 0,159, +,+, 62429 LINE CR1 1326 chr1 97153132 97153535 CR1-C4 569 - 97153132 97153535 0 2 109,294, 0,109, -,-, 62451 LINE CR1 1326 chr1 97229982 97230336 AmnSINE1 499 + 97229982 97230336 0 2 75,61, 0,293, +,+, 62500 SINE 5S-Deu-L2 1326 chr1 97233688 97234074 GGLTR5B 443 + 97233688 97234074 0 2 101,266, 0,120, +,+, 62506 LTR ERVL 1326 chr1 97240181 97241073 Char12Mar1_GG 565 - 97240181 97241073 0 3 250,111,192, 0,589,700, -,-,-, 62510 DNA hAT-Charlie 1327 chr1 97351612 97351708 (CCG)n 376 + 97351612 97351708 0 2 44,10, 0,86, +,+, 62618 Simple_repeat Simple_repeat 1327 chr1 97370675 97370971 CR1-11_Crp 232 - 97370675 97370971 0 2 155,118, 0,178, -,-, 62635 LINE CR1 1328 chr1 97421645 97422061 Char12Mar1_GG 595 - 97421645 97422061 0 2 72,332, 0,84, -,-, 62678 DNA hAT-Charlie 1328 chr1 97458903 97460407 CR1-F2 448 + 97458903 97460407 0 2 586,847, 0,657, +,+, 62712 LINE CR1 1328 chr1 97482140 97482709 CR1-F2 564 + 97482140 97482709 0 2 164,405, 0,164, +,+, 62735 LINE CR1 1329 chr1 97520558 97521098 CR1-D2 655 - 97520558 97521098 0 2 101,439, 0,101, -,-, 62759 LINE CR1 1329 chr1 97556692 97557919 CR1-C 406 - 97556692 97557919 0 2 363,796, 0,431, -,-, 62787 LINE CR1 1329 chr1 97629100 97630157 CR1-Y4 581 + 97629100 97630157 0 2 188,215, 0,842, +,+, 62841 LINE CR1 1329 chr1 97632110 97632683 CR1-11_Crp 116 - 97632110 97632683 0 2 383,156, 0,417, -,-, 62843 LINE CR1 1330 chr1 97745491 97746356 CR1-E 474 + 97745491 97746356 0 2 412,419, 0,446, +,+, 62922 LINE CR1 1331 chr1 97859947 97860313 CR1-F2 358 - 97859947 97860313 0 2 175,191, 0,175, -,-, 63008 LINE CR1 1332 chr1 97949964 97950034 (TACA)n 286 + 97949964 97950034 0 2 35,7, 0,63, +,+, 63060 Simple_repeat Simple_repeat 1332 chr1 97989879 97990702 TguLTR5e 216 + 97989879 97990702 0 2 453,130, 0,693, +,+, 63096 LTR ERVL 1332 chr1 98041232 98041536 Char12Mar1_GG 621 - 98041232 98041536 0 2 144,160, 0,144, -,-, 63135 DNA hAT-Charlie 1333 chr1 98124820 98126112 ENS3-int 862 + 98124820 98126112 0 2 911,374, 0,918, +,+, 63184 LTR ERVL 1333 chr1 98170848 98172849 CR1-F2 459 - 98170848 98172849 0 2 910,66, 0,1935, -,-, 63212 LINE CR1 1334 chr1 98194445 98195652 CR1-Y 687 - 98194445 98195652 0 2 477,59, 0,1148, -,-, 63226 LINE CR1 1334 chr1 98206830 98206888 (TTTG)n 604 + 98206830 98206888 0 2 8,18, 0,40, +,+, 63235 Simple_repeat Simple_repeat 1334 chr1 98260144 98261992 CR1-F2 595 - 98260144 98261992 0 3 344,455,1024, 0,369,824, -,-,-, 63272 LINE CR1 1334 chr1 98261979 98262198 CR1-C3 402 - 98261979 98262198 0 2 80,139, 0,80, -,-, 63273 LINE CR1 1335 chr1 98312165 98313558 CR1-D 634 + 98312165 98313558 0 2 118,1273, 0,120, +,+, 63298 LINE CR1 1336 chr1 98447080 98448989 Char12Mar1_GG 657 - 98447080 98448989 0 2 278,207, 0,1702, -,-, 63364 DNA hAT-Charlie 1336 chr1 98458109 98462055 L2-3_Crp 428 + 98458109 98462055 0 2 91,56, 0,3890, +,+, 63373 LINE L2 1336 chr1 98460026 98460999 CR1-X2 587 - 98460026 98460999 0 2 255,718, 0,255, -,-, 63375 LINE CR1 1336 chr1 98462829 98463457 CR1-11_Crp 157 - 98462829 98463457 0 2 129,472, 0,156, -,-, 63377 LINE CR1 1336 chr1 98543060 98544976 CR1-F2 373 - 98543060 98544976 0 2 255,153, 0,1763, -,-, 63419 LINE CR1 1337 chr1 98644291 98644677 CR1-Y2_Aves 125 + 98644291 98644677 0 2 248,130, 0,256, +,+, 63485 LINE CR1 1338 chr1 98736089 98737468 CR1-Y4 578 + 98736089 98737468 0 2 665,713, 0,666, +,+, 63535 LINE CR1 1339 chr1 98847696 98848840 CR1-Y2_Aves 324 - 98847696 98848840 0 3 444,390,289, 0,465,855, -,-,-, 63599 LINE CR1 1339 chr1 98907636 98907689 (TTGT)n 532 + 98907636 98907689 0 2 11,7, 0,46, +,+, 63638 Simple_repeat Simple_repeat 1339 chr1 98958883 98958952 (TTTGT)n 560 + 98958883 98958952 0 2 13,7, 0,62, +,+, 63682 Simple_repeat Simple_repeat 1341 chr1 99192000 99193445 CR1-C4 593 - 99192000 99193445 0 3 882,162,364, 0,887,1081, -,-,-, 63849 LINE CR1 1341 chr1 99207366 99208227 CR1-X1 598 + 99207366 99208227 0 2 220,599, 0,262, +,+, 63859 LINE CR1 1341 chr1 99213974 99215491 CR1-Y2_Aves 386 - 99213974 99215491 0 2 469,946, 0,571, -,-, 63867 LINE CR1 1342 chr1 99223975 99226861 CR1-G 839 - 99223975 99226861 0 2 1464,1422, 0,1464, -,-, 63877 LINE CR1 1342 chr1 99253585 99254332 CR1-Y1_Aves 148 + 99253585 99254332 0 2 383,210, 0,537, +,+, 63896 LINE CR1 1343 chr1 99362371 99362813 CR1-X2 641 - 99362371 99362813 0 2 288,150, 0,292, -,-, 63963 LINE CR1 1343 chr1 99406624 99407639 CR1-Y2_Aves 392 - 99406624 99407639 0 2 211,577, 0,438, -,-, 63993 LINE CR1 1343 chr1 99415598 99416782 CR1-Y 742 + 99415598 99416782 0 2 195,989, 0,195, +,+, 64000 LINE CR1 1343 chr1 99441192 99441234 (TTTT)n 416 + 99441192 99441234 0 2 6,12, 0,30, +,+, 64026 Simple_repeat Simple_repeat 1343 chr1 99448555 99449387 Char12Mar1_GG 524 - 99448555 99449387 0 2 501,52, 0,780, -,-, 64032 DNA hAT-Charlie 1343 chr1 99458332 99460054 GGLTR8B 122 + 99458332 99460054 0 2 296,332, 0,1390, +,+, 64038 LTR ERVL 1343 chr1 99458678 99459728 CR1-X2 322 - 99458678 99459728 0 2 421,74, 0,976, -,-, 64039 LINE CR1 1344 chr1 99493762 99495236 CR1-X2 225 + 99493762 99495236 0 2 531,784, 0,690, +,+, 64062 LINE CR1 1344 chr1 99518539 99520183 CR1-Y2_Aves 109 - 99518539 99520183 0 2 1293,191, 0,1453, -,-, 64077 LINE CR1 1345 chr1 99632615 99633223 GGLTR8B 204 + 99632615 99633223 0 2 424,173, 0,435, +,+, 64149 LTR ERVL 1345 chr1 99633992 99634442 CR1-Y2_Aves 261 - 99633992 99634442 0 2 346,103, 0,347, -,-, 64151 LINE CR1 1345 chr1 99636902 99638651 Mariner1_GG 550 - 99636902 99638651 0 2 371,923, 0,826, -,-, 64155 DNA TcMar-Mariner 1345 chr1 99637271 99637730 CR1-H 784 - 99637271 99637730 0 2 254,205, 0,254, -,-, 64156 LINE CR1 1345 chr1 99651496 99652821 GGLTR11 661 - 99651496 99652821 0 2 520,805, 0,520, -,-, 64164 LTR ERV1 1345 chr1 99653156 99657487 GGERVK10-int 412 + 99653156 99657487 0 5 308,1829,71,71,168, 0,623,2452,4092,4163, +,+,+,+,+, 64166 LTR ERVK 1345 chr1 99657550 99662160 GGLTR11-int 748 - 99657550 99662160 0 3 1996,432,2128, 0,1996,2482, -,-,-, 64169 LTR ERV1 1345 chr1 99698474 99701127 CR1-X 216 - 99698474 99701127 0 2 1805,331, 0,2322, -,-, 64195 LINE CR1 1345 chr1 99728893 99729836 CR1-D2 693 - 99728893 99729836 0 2 849,94, 0,849, -,-, 64223 LINE CR1 1346 chr1 99773742 99774677 CR1-D 534 - 99773742 99774677 0 2 201,620, 0,315, -,-, 64259 LINE CR1 1346 chr1 99819740 99820420 GGLTR3A 907 + 99819740 99820420 0 2 527,153, 0,527, +,+, 64302 LTR ERVL 1346 chr1 99833120 99834155 Char12Mar1_GG 717 - 99833120 99834155 0 3 135,31,198, 0,190,837, -,-,-, 64316 DNA hAT-Charlie 1346 chr1 99840624 99841198 GGLTR5B 626 - 99840624 99841198 0 2 180,367, 0,207, -,-, 64324 LTR ERVL 1346 chr1 99861835 99864296 Charlie12_GG 638 - 99861835 99864296 0 2 1690,162, 0,2299, -,-, 64347 DNA hAT-Charlie 1347 chr1 99885523 99886162 GGLTR3A 892 + 99885523 99886162 0 2 527,112, 0,527, +,+, 64365 LTR ERVL 1347 chr1 99899510 99899863 CR1-E 526 + 99899510 99899863 0 2 50,264, 0,89, +,+, 64383 LINE CR1 1347 chr1 99905714 99912904 CR1-Y 413 + 99905714 99912904 0 2 696,519, 0,6671, +,+, 64392 LINE CR1 1347 chr1 99906473 99912375 GGERVL-A-int 702 - 99906473 99912375 0 4 510,45,3482,1817, 0,515,602,4085, -,-,-,-, 64394 LTR ERVL 1347 chr1 99928232 99929304 GGLTR8B 257 + 99928232 99929304 0 3 113,147,114, 0,254,958, +,+,+, 64416 LTR ERVL 1347 chr1 99934735 99934836 GA-rich 408 + 99934735 99934836 0 2 25,57, 0,44, +,+, 64424 Low_complexity Low_complexity 1347 chr1 99951065 99951999 CR1-C4 498 - 99951065 99951999 0 2 706,228, 0,706, -,-, 64436 LINE CR1 1347 chr1 99961611 99962003 CR1-E 374 - 99961611 99962003 0 2 170,78, 0,314, -,-, 64449 LINE CR1 1347 chr1 99980295 99981149 CR1-D2 552 - 99980295 99981149 0 2 594,260, 0,594, -,-, 64465 LINE CR1 1348 chr1 100075380 100076124 CR1-Y2_Aves 177 - 100075380 100076124 0 2 380,360, 0,384, -,-, 64546 LINE CR1 1348 chr1 100088319 100090099 CR1-Y3 646 - 100088319 100090099 0 2 377,842, 0,938, -,-, 64559 LINE CR1 1348 chr1 100100362 100102261 CR1-C4 561 + 100100362 100102261 0 3 229,99,778, 0,1019,1121, +,+,+, 64573 LINE CR1 1349 chr1 100146118 100147584 GGLTR8B 387 - 100146118 100147584 0 2 207,787, 0,679, -,-, 64615 LTR ERVL 1349 chr1 100147697 100147829 (T)n 744 + 100147697 100147829 0 2 21,50, 0,82, +,+, 64616 Simple_repeat Simple_repeat 1349 chr1 100172589 100173426 CR1-D 527 + 100172589 100173426 0 2 159,165, 0,672, +,+, 64641 LINE CR1 1349 chr1 100198209 100199655 CR1-F2 516 + 100198209 100199655 0 2 516,916, 0,530, +,+, 64667 LINE CR1 1349 chr1 100239480 100241811 Mariner1_GG 555 - 100239480 100241811 0 2 347,289, 0,2042, -,-, 64724 DNA TcMar-Mariner 1349 chr1 100239802 100241540 CR1-D 491 - 100239802 100241540 0 2 68,1665, 0,73, -,-, 64725 LINE CR1 1350 chr1 100279138 100279195 (T)n 1000 + 100279138 100279195 0 2 26,17, 0,40, +,+, 64769 Simple_repeat Simple_repeat 1350 chr1 100315964 100325933 Char12Mar1_GG 560 - 100315964 100325933 0 2 528,80, 0,9889, -,-, 64818 DNA hAT-Charlie 1350 chr1 100346256 100346676 GGLTR8B 301 - 100346256 100346676 0 2 242,157, 0,263, -,-, 64856 LTR ERVL 1350 chr1 100389396 100391863 CR1-Y4 471 - 100389396 100391863 0 2 594,1392, 0,1075, -,-, 64882 LINE CR1 1350 chr1 100392882 100393018 (TCCCT)n 338 + 100392882 100393018 0 2 7,52, 0,84, +,+, 64884 Simple_repeat Simple_repeat 1351 chr1 100407432 100407924 CR1-C4 524 + 100407432 100407924 0 2 188,279, 0,213, +,+, 64901 LINE CR1 1351 chr1 100409525 100410533 CR1-Y2_Aves 243 - 100409525 100410533 0 3 79,316,276, 0,199,732, -,-,-, 64903 LINE CR1 1351 chr1 100417013 100417080 (TATTTT)n 436 + 100417013 100417080 0 2 23,9, 0,58, +,+, 64914 Simple_repeat Simple_repeat 1351 chr1 100431067 100431388 Charlie12_GG 290 - 100431067 100431388 0 2 94,197, 0,124, -,-, 64926 DNA hAT-Charlie 1351 chr1 100431475 100434984 GGLTR3B1 745 - 100431475 100434984 0 2 3014,495, 0,3014, -,-, 64928 LTR ERVL 1351 chr1 100435636 100436854 Char12Mar1_GG 426 - 100435636 100436854 0 2 637,578, 0,640, -,-, 64931 DNA hAT-Charlie 1351 chr1 100445837 100445903 (TTAA)n 440 + 100445837 100445903 0 2 7,18, 0,48, +,+, 64938 Simple_repeat Simple_repeat 1351 chr1 100447854 100448561 CR1-L3A_Croc 120 - 100447854 100448561 0 2 125,246, 0,461, -,-, 64943 LINE CR1 1351 chr1 100477295 100477668 CR1-Y2_Aves 202 + 100477295 100477668 0 2 29,286, 0,87, +,+, 64969 LINE CR1 1351 chr1 100479499 100479568 (A)n 862 + 100479499 100479568 0 2 19,26, 0,43, +,+, 64972 Simple_repeat Simple_repeat 1351 chr1 100484355 100485665 CR1-X2 467 - 100484355 100485665 0 2 643,667, 0,643, -,-, 64976 LINE CR1 1351 chr1 100488040 100488980 GGLTR3A 868 + 100488040 100488980 0 2 518,422, 0,518, +,+, 64981 LTR ERVL 1351 chr1 100490206 100492209 CR1-F2 536 + 100490206 100492209 0 3 125,511,111, 0,1013,1892, +,+,+, 64984 LINE CR1 1351 chr1 100497797 100499261 CR1-X2 507 - 100497797 100499261 0 3 229,324,223, 0,229,1241, -,-,-, 64993 LINE CR1 1351 chr1 100498350 100499038 ENS1-LTR 876 + 100498350 100499038 0 2 485,203, 0,485, +,+, 64994 LTR ERVL 1351 chr1 100499278 100500000 GGLTR3F1 981 - 100499278 100500000 0 2 494,228, 0,494, -,-, 64995 LTR ERVL 1351 chr1 100501479 100502284 GGERVL-B-int 741 - 100501479 100502284 0 3 39,271,494, 0,39,311, -,-,-, 64997 LTR ERVL 1351 chr1 100502284 100503574 CR1-X 574 - 100502284 100503574 0 2 438,217, 0,1073, -,-, 64998 LINE CR1 1352 chr1 100549637 100549704 A-rich 404 + 100549637 100549704 0 2 23,17, 0,50, +,+, 65044 Low_complexity Low_complexity 1352 chr1 100569986 100571402 CR1-H 343 + 100569986 100571402 0 2 878,275, 0,1141, +,+, 65069 LINE CR1 1352 chr1 100574394 100574950 CR1-D2 616 - 100574394 100574950 0 2 84,472, 0,84, -,-, 65078 LINE CR1 1352 chr1 100633323 100635388 CR1-E 665 + 100633323 100635388 0 2 924,945, 0,1120, +,+, 65133 LINE CR1 1352 chr1 100644770 100645544 CR1-D2 648 + 100644770 100645544 0 2 512,202, 0,572, +,+, 65144 LINE CR1 1352 chr1 100651853 100653206 CR1-Y2_Aves 343 + 100651853 100653206 0 4 348,281,74,94, 0,901,1185,1259, +,+,+,+, 65149 LINE CR1 1353 chr1 100688028 100688646 Char12Mar1_GG 525 - 100688028 100688646 0 2 301,200, 0,418, -,-, 65175 DNA hAT-Charlie 1353 chr1 100702969 100709152 GGERVK1-int 978 + 100702969 100709152 0 4 241,5262,439,241, 0,241,5503,5942, +,+,+,+, 65187 LTR ERVK 1353 chr1 100756590 100756947 Char12Mar1_GG 644 - 100756590 100756947 0 2 153,203, 0,154, -,-, 65212 DNA hAT-Charlie 1353 chr1 100761168 100761520 GGLTR5A 440 - 100761168 100761520 0 2 57,250, 0,102, -,-, 65216 LTR ERVL 1353 chr1 100765394 100766606 CR1-X2 491 - 100765394 100766606 0 3 703,270,221, 0,711,991, -,-,-, 65222 LINE CR1 1353 chr1 100784416 100785519 CR1-Y2_Aves 249 - 100784416 100785519 0 3 363,397,134, 0,402,969, -,-,-, 65235 LINE CR1 1354 chr1 100830110 100837261 CR1-X2 308 + 100830110 100837261 0 3 432,292,324, 0,453,6827, +,+,+, 65279 LINE CR1 1354 chr1 100834204 100836562 GGERVK1-int 981 + 100834204 100836562 0 2 241,2117, 0,241, +,+, 65280 LTR ERVK 1354 chr1 100859807 100860428 CR1-F2 801 - 100859807 100860428 0 2 488,133, 0,488, -,-, 65302 LINE CR1 1355 chr1 100947309 100948611 CR1-Y1_Aves 255 - 100947309 100948611 0 2 582,203, 0,1099, -,-, 65368 LINE CR1 1355 chr1 100995445 100999911 CR1-F 942 - 100995445 100999911 0 2 780,3159, 0,1307, -,-, 65397 LINE CR1 1355 chr1 101007374 101007506 (A)n 914 + 101007374 101007506 0 2 18,53, 0,79, +,+, 65408 Simple_repeat Simple_repeat 1355 chr1 101025226 101026143 CR1-Y1_Aves 312 - 101025226 101026143 0 2 286,631, 0,286, -,-, 65419 LINE CR1 1355 chr1 101028426 101030694 CR1-F 941 + 101028426 101030694 0 2 956,785, 0,1483, +,+, 65423 LINE CR1 1355 chr1 101034200 101036729 LSU-rRNA_Hsa 688 - 101034200 101036729 0 4 105,265,778,685, 0,127,590,1844, -,-,-,-, 65429 rRNA rRNA 1356 chr1 101070433 101074628 LSU-rRNA_Hsa 713 - 101070433 101074628 0 3 1548,1141,696, 0,1674,3499, -,-,-, 65470 rRNA rRNA 1356 chr1 101098641 101099262 CR1-Y2_Aves 208 + 101098641 101099262 0 2 317,302, 0,319, +,+, 65478 LINE CR1 1356 chr1 101108867 101109759 CR1-E 478 + 101108867 101109759 0 2 430,459, 0,433, +,+, 65481 LINE CR1 1356 chr1 101167340 101168878 CR1-X2 423 - 101167340 101168878 0 2 383,1155, 0,383, -,-, 65523 LINE CR1 1357 chr1 101213697 101214135 GGLTR5A 353 + 101213697 101214135 0 2 294,96, 0,342, +,+, 65569 LTR ERVL 1357 chr1 101228177 101234625 CR1-Y3 593 + 101228177 101234625 0 3 1280,65,277, 0,5019,6171, +,+,+, 65585 LINE CR1 1357 chr1 101287249 101288181 CR1-F2 654 + 101287249 101288181 0 2 508,410, 0,522, +,+, 65636 LINE CR1 1357 chr1 101290493 101291068 GGLTR5B 712 - 101290493 101291068 0 2 170,357, 0,218, -,-, 65638 LTR ERVL 1357 chr1 101302257 101303408 CR1-X2 540 + 101302257 101303408 0 2 1035,64, 0,1087, +,+, 65644 LINE CR1 1358 chr1 101343688 101344182 GGLTR3F2 606 + 101343688 101344182 0 2 232,216, 0,278, +,+, 65680 LTR ERVL 1358 chr1 101348556 101349168 CR1-E 565 - 101348556 101349168 0 2 426,184, 0,428, -,-, 65688 LINE CR1 1358 chr1 101361409 101363699 CR1-D2 631 + 101361409 101363699 0 2 327,189, 0,2101, +,+, 65705 LINE CR1 1358 chr1 101385341 101385887 CR1-Y1_Aves 282 + 101385341 101385887 0 2 337,181, 0,365, +,+, 65729 LINE CR1 1358 chr1 101422765 101424898 CR1-C4 571 - 101422765 101424898 0 2 1074,257, 0,1876, -,-, 65764 LINE CR1 1358 chr1 101428780 101429145 GGLTR5B 587 - 101428780 101429145 0 2 257,108, 0,257, -,-, 65770 LTR ERVL 1358 chr1 101447707 101448364 CR1-X2 441 - 101447707 101448364 0 4 279,23,22,89, 0,279,542,568, -,-,-,-, 65790 LINE CR1 1359 chr1 101472225 101474273 GGLTR3F1 735 - 101472225 101474273 0 2 1551,495, 0,1553, -,-, 65821 LTR ERVL 1359 chr1 101516820 101517795 CR1-Y1_Aves 310 - 101516820 101517795 0 2 340,555, 0,420, -,-, 65874 LINE CR1 1359 chr1 101562350 101564660 GGLTR7B 806 - 101562350 101564660 0 2 479,111, 0,2199, -,-, 65923 LTR ERV1 1359 chr1 101565660 101566500 Char12Mar1_GG 494 + 101565660 101566500 0 2 726,72, 0,768, +,+, 65925 DNA hAT-Charlie 1360 chr1 101600808 101603247 CR1-F 692 + 101600808 101603247 0 2 860,1579, 0,860, +,+, 65968 LINE CR1 1360 chr1 101603831 101604883 GGLTR12C 535 + 101603831 101604883 0 2 123,254, 0,798, +,+, 65971 LTR ERVL 1360 chr1 101642515 101643457 CR1-C4 544 + 101642515 101643457 0 2 886,56, 0,886, +,+, 66017 LINE CR1 1360 chr1 101674955 101679623 ENS1-LTR 979 + 101674955 101679623 0 3 913,2841,913, 0,914,3755, +,+,+, 66050 LTR ERVL 1360 chr1 101693918 101694519 GGLTR3A 540 + 101693918 101694519 0 2 448,126, 0,475, +,+, 66066 LTR ERVL 1360 chr1 101709612 101711630 CR1-Y2_Aves 373 + 101709612 101711630 0 2 227,191, 0,1827, +,+, 66081 LINE CR1 1361 chr1 101734791 101748309 Char12Mar1_GG 618 - 101734791 101748309 0 4 52,257,105,59, 0,55,12826,13459, -,-,-,-, 66094 DNA hAT-Charlie 1361 chr1 101738316 101739043 CR1-Y4 515 + 101738316 101739043 0 2 77,208, 0,519, +,+, 66095 LINE CR1 1361 chr1 101744203 101744298 (ATGAAT)n 306 + 101744203 101744298 0 2 12,7, 0,88, +,+, 66101 Simple_repeat Simple_repeat 1361 chr1 101751503 101752982 CR1-H2 872 - 101751503 101752982 0 2 224,736, 0,743, -,-, 66109 LINE CR1 1361 chr1 101785297 101788603 GGERVL-A-int 748 - 101785297 101788603 0 3 1823,949,534, 0,1823,2772, -,-,-, 66151 LTR ERVL 1361 chr1 101819559 101820149 GGLTR3A 648 + 101819559 101820149 0 2 505,85, 0,505, +,+, 66178 LTR ERVL 1361 chr1 101840405 101841269 GGLTR8B 223 - 101840405 101841269 0 3 97,166,493, 0,149,371, -,-,-, 66196 LTR ERVL 1362 chr1 101855055 101855340 GGERV10_LTR 605 - 101855055 101855340 0 2 108,88, 0,197, -,-, 66207 LTR ERVL 1362 chr1 101878320 101878957 CR1-C4 504 + 101878320 101878957 0 2 528,109, 0,528, +,+, 66234 LINE CR1 1362 chr1 101889140 101889866 GGERVL18-int 560 + 101889140 101889866 0 2 376,346, 0,380, +,+, 66245 LTR ERVL 1362 chr1 101894574 101894901 GGERV10_LTR 848 + 101894574 101894901 0 2 63,158, 0,169, +,+, 66251 LTR ERVL 1362 chr1 101896334 101896852 CR1-Y4 682 + 101896334 101896852 0 2 92,426, 0,92, +,+, 66256 LINE CR1 1362 chr1 101898637 101899665 GGLTR5B 649 - 101898637 101899665 0 3 178,292,68, 0,321,960, -,-,-, 66258 LTR ERVL 1362 chr1 101911121 101912634 CR1-Y4 445 - 101911121 101912634 0 2 1103,406, 0,1107, -,-, 66274 LINE CR1 1362 chr1 101925507 101926303 CR1-Y2_Aves 247 - 101925507 101926303 0 2 84,705, 0,91, -,-, 66291 LINE CR1 1362 chr1 101947179 101947975 CR1-F 467 - 101947179 101947975 0 2 617,179, 0,617, -,-, 66323 LINE CR1 1362 chr1 101960446 101961397 CR1-C3 569 + 101960446 101961397 0 2 108,840, 0,111, +,+, 66339 LINE CR1 1362 chr1 101972661 101973719 CR1-D2 632 - 101972661 101973719 0 2 63,152, 0,906, -,-, 66349 LINE CR1 1362 chr1 101972723 101973578 CR1-C3 664 - 101972723 101973578 0 2 275,580, 0,275, -,-, 66350 LINE CR1 1363 chr1 101988903 101992421 GGERVL-A-int 747 - 101988903 101992421 0 3 563,43,2863, 0,568,655, -,-,-, 66365 LTR ERVL 1363 chr1 101998442 101999564 CR1-C3 627 - 101998442 101999564 0 2 854,167, 0,955, -,-, 66371 LINE CR1 1363 chr1 101999296 101999397 GGLTR10C1 863 + 101999296 101999397 0 2 44,57, 0,44, +,+, 66372 LTR ERVK 1363 chr1 102012076 102013331 CR1-E 676 + 102012076 102013331 0 2 178,88, 0,1167, +,+, 66388 LINE CR1 1363 chr1 102033980 102035022 Char12Mar1_GG 582 + 102033980 102035022 0 2 159,851, 0,191, +,+, 66411 DNA hAT-Charlie 1363 chr1 102035562 102036922 CR1-D2 649 + 102035562 102036922 0 3 541,474,29, 0,857,1331, +,+,+, 66413 LINE CR1 1363 chr1 102091347 102092006 ENS1-LTR 936 + 102091347 102092006 0 2 381,278, 0,381, +,+, 66466 LTR ERVL 1363 chr1 102102916 102103635 GGLTR8B 318 + 102102916 102103635 0 2 397,191, 0,528, +,+, 66473 LTR ERVL 1364 chr1 102129664 102130574 GGLTR8B 239 + 102129664 102130574 0 2 212,122, 0,788, +,+, 66496 LTR ERVL 1364 chr1 102129881 102130447 CR1-X 481 - 102129881 102130447 0 2 76,342, 0,224, -,-, 66497 LINE CR1 1364 chr1 102153467 102155152 CR1-Y4 549 - 102153467 102155152 0 2 400,337, 0,1348, -,-, 66521 LINE CR1 1364 chr1 102159265 102161121 CR1-C4 523 + 102159265 102161121 0 2 848,1008, 0,848, +,+, 66528 LINE CR1 1365 chr1 102245148 102250089 GGERVL18-int 589 + 102245148 102250089 0 4 290,3113,1193,259, 0,376,3489,4682, +,+,+,+, 66595 LTR ERVL 1365 chr1 102260696 102262052 GGERVL18-LTR 633 + 102260696 102262052 0 2 1025,331, 0,1025, +,+, 66602 LTR ERVL 1365 chr1 102277005 102277258 (GGAAA)n 843 + 102277005 102277258 0 2 30,205, 0,48, +,+, 66616 Simple_repeat Simple_repeat 170 chr1 102367217 102367554 GGERV10_LTR 658 + 102367217 102367554 0 2 87,160, 0,177, +,+, 66677 LTR ERVL 1366 chr1 102368108 102369222 CR1-F 943 - 102368108 102369222 0 2 858,256, 0,858, -,-, 66680 LINE CR1 1366 chr1 102450647 102451448 CR1-Y2 270 - 102450647 102451448 0 2 545,90, 0,711, -,-, 66726 LINE CR1 1366 chr1 102468531 102470418 CR1-Y4 544 - 102468531 102470418 0 2 1151,617, 0,1270, -,-, 66738 LINE CR1 1367 chr1 102545820 102546359 GGLTR8B 180 - 102545820 102546359 0 2 233,251, 0,288, -,-, 66798 LTR ERVL 1367 chr1 102562627 102563317 GGERVL-A-int 327 + 102562627 102563317 0 3 100,375,118, 0,197,572, +,+,+, 66812 LTR ERVL 1368 chr1 102640773 102641219 Char12Mar1_GG 430 - 102640773 102641219 0 2 219,26, 0,420, -,-, 66853 DNA hAT-Charlie 1368 chr1 102721709 102722380 CR1-D2 674 - 102721709 102722380 0 2 466,205, 0,466, -,-, 66886 LINE CR1 1368 chr1 102725151 102726528 CR1-B2 191 + 102725151 102726528 0 2 1007,148, 0,1229, +,+, 66889 LINE CR1 1368 chr1 102755093 102755456 CR1-C4 635 - 102755093 102755456 0 2 182,181, 0,182, -,-, 66908 LINE CR1 1369 chr1 102782901 102782963 (CTTTTT)n 716 + 102782901 102782963 0 2 12,21, 0,41, +,+, 66924 Simple_repeat Simple_repeat 1369 chr1 102827403 102827681 CR1-Y2_Aves 359 - 102827403 102827681 0 2 191,75, 0,203, -,-, 66962 LINE CR1 1369 chr1 102857952 102861718 GGLTR7-int 345 - 102857952 102861718 0 3 1483,1126,226, 0,1556,3540, -,-,-, 66975 LTR ERV1 1369 chr1 102876203 102876486 GGLTR8A 596 + 102876203 102876486 0 2 165,118, 0,165, +,+, 66985 LTR ERVL 1370 chr1 102894214 102896922 CR1-C4 636 + 102894214 102896922 0 2 107,240, 0,2468, +,+, 66991 LINE CR1 1370 chr1 102899623 102901609 CR1-Y3 643 - 102899623 102901609 0 2 1016,970, 0,1016, -,-, 66995 LINE CR1 1370 chr1 102907287 102907596 GGLTR8B 249 + 102907287 102907596 0 2 138,171, 0,138, +,+, 67000 LTR ERVL 1370 chr1 102915013 102915567 GGLTR8B 262 + 102915013 102915567 0 2 192,135, 0,419, +,+, 67003 LTR ERVL 1370 chr1 102922271 102922815 CR1-D2 574 + 102922271 102922815 0 2 245,297, 0,247, +,+, 67010 LINE CR1 1370 chr1 102952086 102952794 GGERVL18-LTR 741 + 102952086 102952794 0 2 365,314, 0,394, +,+, 67029 LTR ERVL 1370 chr1 102955691 102956770 CR1-X2 538 - 102955691 102956770 0 2 127,252, 0,827, -,-, 67033 LINE CR1 1370 chr1 103003600 103004402 CR1-Y3 789 - 103003600 103004402 0 2 265,378, 0,424, -,-, 67059 LINE CR1 1371 chr1 103117482 103117873 CR1-L3A_Croc 256 - 103117482 103117873 0 2 163,136, 0,255, -,-, 67124 LINE CR1 1372 chr1 103185736 103187758 CR1-Y3 688 + 103185736 103187758 0 2 406,387, 0,1635, +,+, 67163 LINE CR1 1373 chr1 103321687 103325471 CR1-Y1_Aves 331 + 103321687 103325471 0 3 137,331,152, 0,172,3632, +,+,+, 67290 LINE CR1 1373 chr1 103340054 103342006 CR1-F 903 + 103340054 103342006 0 2 1359,583, 0,1369, +,+, 67304 LINE CR1 1373 chr1 103345781 103348069 Mariner1_GG 583 - 103345781 103348069 0 2 376,936, 0,1352, -,-, 67307 DNA TcMar-Mariner 1373 chr1 103365612 103366787 CR1-X2 242 - 103365612 103366787 0 2 900,252, 0,923, -,-, 67327 LINE CR1 1373 chr1 103371433 103372044 GGLTR3A 608 - 103371433 103372044 0 2 110,440, 0,171, -,-, 67330 LTR ERVL 1373 chr1 103378285 103378348 (T)n 1000 + 103378285 103378348 0 2 22,29, 0,34, +,+, 67333 Simple_repeat Simple_repeat 1373 chr1 103388862 103390825 CR1-Y2_Aves 271 - 103388862 103390825 0 3 866,550,151, 0,1222,1812, -,-,-, 67347 LINE CR1 1374 chr1 103418457 103418950 GGLTR3D 544 - 103418457 103418950 0 2 108,276, 0,217, -,-, 67367 LTR ERVL 1374 chr1 103466150 103468039 CR1-Y4 457 + 103466150 103468039 0 2 472,1417, 0,472, +,+, 67403 LINE CR1 1375 chr1 103617305 103619842 CR1-Y1_Aves 202 + 103617305 103619842 0 2 292,260, 0,2277, +,+, 67531 LINE CR1 1376 chr1 103680103 103682079 CR1-D 714 - 103680103 103682079 0 2 1785,191, 0,1785, -,-, 67578 LINE CR1 1376 chr1 103774828 103775608 GGLTR11 487 + 103774828 103775608 0 2 42,378, 0,402, +,+, 67647 LTR ERV1 1377 chr1 103858369 103862430 Char12Mar1_GG 514 - 103858369 103862430 0 3 563,201,68, 0,3781,3993, -,-,-, 67689 DNA hAT-Charlie 1377 chr1 103880206 103880302 (AT)n 428 + 103880206 103880302 0 2 7,21, 0,75, +,+, 67703 Simple_repeat Simple_repeat 1377 chr1 103881079 103882553 CR1-D2 676 - 103881079 103882553 0 2 899,113, 0,1361, -,-, 67706 LINE CR1 1377 chr1 103915468 103916810 CR1-D 592 + 103915468 103916810 0 2 318,1022, 0,320, +,+, 67726 LINE CR1 1377 chr1 103917942 103918767 Char12Mar1_GG 602 - 103917942 103918767 0 2 387,390, 0,435, -,-, 67727 DNA hAT-Charlie 1378 chr1 103941311 103942306 Mariner1_GG 610 - 103941311 103942306 0 2 873,122, 0,873, -,-, 67750 DNA TcMar-Mariner 1378 chr1 104060910 104060970 (TGCTTAT)n 380 + 104060910 104060970 0 2 6,18, 0,42, +,+, 67809 Simple_repeat Simple_repeat 1380 chr1 104244810 104246282 CR1-F2 425 + 104244810 104246282 0 2 85,271, 0,1201, +,+, 67926 LINE CR1 1380 chr1 104328152 104328769 CR1-X1 497 + 104328152 104328769 0 2 319,291, 0,326, +,+, 67982 LINE CR1 1383 chr1 104632652 104633519 X13_LINE 146 - 104632652 104633519 0 2 212,457, 0,410, -,-, 68140 LINE L2 1383 chr1 104711531 104712686 CR1-X 592 + 104711531 104712686 0 2 848,307, 0,848, +,+, 68181 LINE CR1 1383 chr1 104718271 104718521 CR1-F2 582 - 104718271 104718521 0 2 137,112, 0,138, -,-, 68186 LINE CR1 1384 chr1 104759330 104759436 MER133B 172 . 104759330 104759436 0 2 100,6, 0,100, -,+, 68214 DNA? DNA? 1384 chr1 104807969 104808048 (ATAT)n 322 + 104807969 104808048 0 2 29,11, 0,68, +,+, 68242 Simple_repeat Simple_repeat 1384 chr1 104844777 104845775 GGLTR5B 551 + 104844777 104845775 0 3 68,281,181, 0,421,817, +,+,+, 68272 LTR ERVL 1384 chr1 104847844 104848353 GGERVL18-int 566 - 104847844 104848353 0 2 343,162, 0,347, -,-, 68277 LTR ERVL 1384 chr1 104848832 104849727 CR1-F2 584 - 104848832 104849727 0 2 69,185, 0,710, -,-, 68280 LINE CR1 1385 chr1 104893968 104895758 CR1-L3B_Croc 253 - 104893968 104895758 0 2 487,93, 0,1697, -,-, 68314 LINE CR1 1385 chr1 104933176 104933556 CR1-C 862 - 104933176 104933556 0 2 320,60, 0,320, -,-, 68329 LINE CR1 1385 chr1 104986951 104987225 CR1-X1 647 + 104986951 104987225 0 2 100,174, 0,100, +,+, 68359 LINE CR1 1386 chr1 105114479 105115051 CR1-C4 622 + 105114479 105115051 0 2 347,225, 0,347, +,+, 68431 LINE CR1 1387 chr1 105125792 105129766 CR1-F2 565 - 105125792 105129766 0 2 85,366, 0,3608, -,-, 68437 LINE CR1 1388 chr1 105314932 105315570 CR1-C4 597 + 105314932 105315570 0 2 61,577, 0,61, +,+, 68590 LINE CR1 1388 chr1 105349736 105350591 CR1-C4 680 - 105349736 105350591 0 2 137,194, 0,661, -,-, 68611 LINE CR1 1389 chr1 105383769 105387771 CR1-D 722 - 105383769 105387771 0 2 174,993, 0,3009, -,-, 68631 LINE CR1 1389 chr1 105461872 105461925 (GGCGG)n 446 + 105461872 105461925 0 2 10,14, 0,39, +,+, 68673 Simple_repeat Simple_repeat 1389 chr1 105482240 105483328 CR1-X2 270 - 105482240 105483328 0 4 126,228,128,537, 0,187,420,551, -,-,-,-, 68688 LINE CR1 1390 chr1 105630876 105631428 GGLTR5B 686 + 105630876 105631428 0 2 434,87, 0,465, +,+, 68759 LTR ERVL 1390 chr1 105642675 105643561 REP131 185 - 105642675 105643561 0 2 504,344, 0,542, -,-, 68768 DNA? DNA? 1391 chr1 105699567 105700994 CR1-C4 491 - 105699567 105700994 0 2 125,669, 0,758, -,-, 68807 LINE CR1 1391 chr1 105713497 105713552 (CCTC)n 554 + 105713497 105713552 0 2 6,6, 0,49, +,+, 68816 Simple_repeat Simple_repeat 1391 chr1 105725054 105725852 CR1-E 563 - 105725054 105725852 0 2 728,70, 0,728, -,-, 68826 LINE CR1 1392 chr1 105867583 105867932 CR1-X1 568 - 105867583 105867932 0 2 90,239, 0,110, -,-, 68914 LINE CR1 1396 chr1 106307166 106307801 CR1-F2 364 + 106307166 106307801 0 2 201,434, 0,201, +,+, 69198 LINE CR1 1397 chr1 106490125 106490451 CR1-C3 529 - 106490125 106490451 0 2 100,226, 0,100, -,-, 69317 LINE CR1 1397 chr1 106515442 106515521 (ACAA)n 470 + 106515442 106515521 0 2 8,17, 0,62, +,+, 69329 Simple_repeat Simple_repeat 1397 chr1 106533769 106534956 CR1-G 809 - 106533769 106534956 0 2 263,924, 0,263, -,-, 69345 LINE CR1 1398 chr1 106655319 106656751 CR1-Y2_Aves 44 + 106655319 106656751 0 2 779,632, 0,800, +,+, 69406 LINE CR1 1399 chr1 106724423 106724821 CR1-C4 589 - 106724423 106724821 0 2 328,70, 0,328, -,-, 69433 LINE CR1 1399 chr1 106799590 106799716 (TA)n 364 + 106799590 106799716 0 2 32,11, 0,115, +,+, 69489 Simple_repeat Simple_repeat 1400 chr1 106877148 106878894 CR1-Y2_Aves 166 + 106877148 106878894 0 3 253,290,189, 0,390,1557, +,+,+, 69542 LINE CR1 1400 chr1 106883094 106884384 CR1-C4 538 - 106883094 106884384 0 2 473,667, 0,623, -,-, 69549 LINE CR1 1400 chr1 106920981 106922235 CR1-F2 556 + 106920981 106922235 0 2 45,1163, 0,91, +,+, 69568 LINE CR1 1402 chr1 107126840 107127000 CR1-C3 625 + 107126840 107127000 0 2 64,96, 0,64, +,+, 69694 LINE CR1 1402 chr1 107127532 107128709 Char12Mar1_GG 539 - 107127532 107128709 0 2 178,987, 0,190, -,-, 69696 DNA hAT-Charlie 1402 chr1 107185288 107186026 CR1-L3B_Croc 221 - 107185288 107186026 0 2 136,311, 0,427, -,-, 69735 LINE CR1 1404 chr1 107373224 107374009 CR1-Y2_Aves 83 + 107373224 107374009 0 2 264,402, 0,383, +,+, 69850 LINE CR1 1404 chr1 107415971 107416465 GGLTR3F2 666 + 107415971 107416465 0 2 238,221, 0,273, +,+, 69877 LTR ERVL 1404 chr1 107420172 107420557 GGLTR5A 464 - 107420172 107420557 0 2 64,285, 0,100, -,-, 69881 LTR ERVL 1405 chr1 107495969 107497497 CR1-X2 262 - 107495969 107497497 0 2 276,1233, 0,295, -,-, 69924 LINE CR1 1405 chr1 107555960 107556268 hAT6-N1_Croc 350 - 107555960 107556268 0 2 128,110, 0,198, -,-, 69960 DNA hAT-hAT6 1405 chr1 107584341 107587056 CR1-C 804 + 107584341 107587056 0 2 304,2411, 0,304, +,+, 69975 LINE CR1 1406 chr1 107657236 107658837 CR1-X1 598 - 107657236 107658837 0 2 508,1033, 0,568, -,-, 70040 LINE CR1 1406 chr1 107663571 107667142 GGERVL18-int 662 + 107663571 107667142 0 3 234,2715,275, 0,581,3296, +,+,+, 70044 LTR ERVL 1406 chr1 107682111 107683549 Char12Mar1_GG 601 - 107682111 107683549 0 2 171,1233, 0,205, -,-, 70056 DNA hAT-Charlie 1407 chr1 107754637 107755278 CR1-Y2_Aves 406 - 107754637 107755278 0 2 88,350, 0,291, -,-, 70114 LINE CR1 1407 chr1 107819240 107821043 CR1-E 691 + 107819240 107821043 0 3 150,363,1290, 0,150,513, +,+,+, 70158 LINE CR1 1407 chr1 107823383 107823609 UCON8 204 - 107823383 107823609 0 2 141,46, 0,180, -,-, 70162 DNA DNA 1408 chr1 107887057 107887908 CR1-11_Crp 226 + 107887057 107887908 0 2 606,158, 0,693, +,+, 70203 LINE CR1 1408 chr1 107923048 107926137 CR1-G 705 + 107923048 107926137 0 2 69,74, 0,3015, +,+, 70219 LINE CR1 1408 chr1 107936104 107937613 GGLTR5A 270 + 107936104 107937613 0 2 551,267, 0,1242, +,+, 70231 LTR ERVL 1409 chr1 108043519 108044147 CR1-11_Crp 246 - 108043519 108044147 0 2 138,432, 0,196, -,-, 70271 LINE CR1 1409 chr1 108075264 108075801 GGLTR5A 288 - 108075264 108075801 0 2 138,366, 0,171, -,-, 70293 LTR ERVL 1409 chr1 108093669 108096556 CR1-F2 509 + 108093669 108096556 0 2 87,330, 0,2557, +,+, 70311 LINE CR1 1410 chr1 108150090 108150975 GGLTR5B 425 + 108150090 108150975 0 2 221,260, 0,625, +,+, 70343 LTR ERVL 1410 chr1 108193588 108194694 CR1-X2 670 + 108193588 108194694 0 2 1023,83, 0,1023, +,+, 70365 LINE CR1 1410 chr1 108213012 108213348 CR1-X1 637 + 108213012 108213348 0 2 182,154, 0,182, +,+, 70372 LINE CR1 1410 chr1 108221643 108223965 CR1-H 773 - 108221643 108223965 0 2 1617,692, 0,1630, -,-, 70379 LINE CR1 1410 chr1 108228939 108232651 CR1-H2 517 - 108228939 108232651 0 3 82,127,148, 0,3437,3564, -,-,-, 70381 LINE CR1 1411 chr1 108284767 108285939 CR1-C4 615 - 108284767 108285939 0 3 250,175,300, 0,250,872, -,-,-, 70415 LINE CR1 1411 chr1 108338217 108339184 REP131 396 - 108338217 108339184 0 3 300,241,177, 0,549,790, -,-,-, 70453 DNA? DNA? 1411 chr1 108359235 108360710 CR1-D2 616 - 108359235 108360710 0 2 632,842, 0,633, -,-, 70470 LINE CR1 1412 chr1 108451924 108452037 A-rich 288 + 108451924 108452037 0 2 23,58, 0,55, +,+, 70526 Low_complexity Low_complexity 1412 chr1 108462471 108462916 L2-3_Crp 305 + 108462471 108462916 0 2 100,197, 0,248, +,+, 70536 LINE L2 1413 chr1 108594094 108594186 (A)n 1000 + 108594094 108594186 0 2 17,18, 0,74, +,+, 70619 Simple_repeat Simple_repeat 1414 chr1 108695218 108697215 CR1-D2 701 + 108695218 108697215 0 3 624,88,436, 0,932,1561, +,+,+, 70707 LINE CR1 1414 chr1 108705958 108707947 CR1-D2 693 + 108705958 108707947 0 3 619,88,436, 0,926,1553, +,+,+, 70720 LINE CR1 1415 chr1 108861503 108863865 CR1-E 787 + 108861503 108863865 0 3 781,536,998, 0,781,1364, +,+,+, 70817 LINE CR1 1415 chr1 108880934 108882149 CR1-Y2_Aves 219 - 108880934 108882149 0 2 116,1099, 0,116, -,-, 70833 LINE CR1 1416 chr1 108924682 108925167 GGLTR3F2 704 + 108924682 108925167 0 2 232,200, 0,285, +,+, 70861 LTR ERVL 1416 chr1 108979168 108980483 CR1-Y2_Aves 273 + 108979168 108980483 0 2 1095,220, 0,1095, +,+, 70906 LINE CR1 1418 chr1 109296661 109297308 CR1-11_Crp 258 - 109296661 109297308 0 2 402,113, 0,534, -,-, 71073 LINE CR1 1419 chr1 109318842 109319711 CR1-D2 662 - 109318842 109319711 0 2 631,111, 0,758, -,-, 71087 LINE CR1 1419 chr1 109402523 109403794 CR1-H2 623 + 109402523 109403794 0 2 1196,75, 0,1196, +,+, 71130 LINE CR1 1420 chr1 109514152 109515237 CR1-X 666 - 109514152 109515237 0 2 301,784, 0,301, -,-, 71191 LINE CR1 1420 chr1 109567285 109570176 CR1-F2 420 + 109567285 109570176 0 2 99,207, 0,2684, +,+, 71221 LINE CR1 1421 chr1 109609801 109610394 CR1-Y2_Aves 152 - 109609801 109610394 0 2 179,351, 0,242, -,-, 71252 LINE CR1 1421 chr1 109674439 109674911 CR1-X 528 + 109674439 109674911 0 2 187,285, 0,187, +,+, 71297 LINE CR1 1422 chr1 109777734 109781075 CR1-F 539 + 109777734 109781075 0 3 1127,781,1431, 0,1129,1910, +,+,+, 71348 LINE CR1 1422 chr1 109793962 109794956 Mariner1_GG 653 - 109793962 109794956 0 2 414,314, 0,680, -,-, 71361 DNA TcMar-Mariner 1422 chr1 109805622 109806583 CR1-8_Crp 216 - 109805622 109806583 0 2 280,479, 0,482, -,-, 71370 LINE CR1 1422 chr1 109836533 109836909 CR1-F2 613 + 109836533 109836909 0 2 74,302, 0,74, +,+, 71398 LINE CR1 1424 chr1 110031090 110032396 CR1-F2 583 - 110031090 110032396 0 2 490,517, 0,789, -,-, 71520 LINE CR1 1424 chr1 110062700 110063564 CR1-F2 554 - 110062700 110063564 0 2 69,142, 0,722, -,-, 71540 LINE CR1 1424 chr1 110062769 110063402 GGLTR11 870 + 110062769 110063402 0 2 305,248, 0,385, +,+, 71541 LTR ERV1 1425 chr1 110109489 110109743 CR1-Y2_Aves 666 + 110109489 110109743 0 2 141,45, 0,209, +,+, 71574 LINE CR1 1426 chr1 110268374 110268930 TguLTR5e 381 + 110268374 110268930 0 2 299,224, 0,332, +,+, 71681 LTR ERVL 1426 chr1 110277002 110277049 (CTTTT)n 414 + 110277002 110277049 0 2 11,7, 0,40, +,+, 71690 Simple_repeat Simple_repeat 1427 chr1 110386779 110387712 CR1-G 829 - 110386779 110387712 0 2 602,330, 0,603, -,-, 71753 LINE CR1 1427 chr1 110390215 110394206 CR1-F2 451 + 110390215 110394206 0 2 264,77, 0,3914, +,+, 71755 LINE CR1 1427 chr1 110404386 110409487 CR1-Y4 581 + 110404386 110409487 0 2 179,743, 0,4358, +,+, 71763 LINE CR1 1427 chr1 110406613 110407461 Mariner1b_GG 516 - 110406613 110407461 0 2 274,73, 0,775, -,-, 71765 DNA TcMar-Mariner 1428 chr1 110526553 110527333 CR1-F0 393 - 110526553 110527333 0 2 427,353, 0,427, -,-, 71830 LINE CR1 1428 chr1 110582458 110582992 CR1-H2 329 - 110582458 110582992 0 2 188,112, 0,422, -,-, 71868 LINE CR1 1428 chr1 110621798 110621948 CR1-F2 728 - 110621798 110621948 0 2 66,84, 0,66, -,-, 71894 LINE CR1 1429 chr1 110630751 110631873 CR1-C4 667 + 110630751 110631873 0 2 71,54, 0,1068, +,+, 71897 LINE CR1 1429 chr1 110707680 110707757 (A)n 826 + 110707680 110707757 0 2 26,21, 0,56, +,+, 71939 Simple_repeat Simple_repeat 1430 chr1 110774884 110775607 CR1-Y1_Aves 385 + 110774884 110775607 0 2 417,289, 0,434, +,+, 71979 LINE CR1 1430 chr1 110867318 110867615 CR1-Y2_Aves 484 + 110867318 110867615 0 2 152,120, 0,177, +,+, 72040 LINE CR1 178 chr1 110886516 110887028 CR1-L3A_Croc 172 + 110886516 110887028 0 2 200,247, 0,265, +,+, 72049 LINE CR1 1431 chr1 110980949 110981044 G-rich 461 + 110980949 110981044 0 2 64,31, 0,64, +,+, 72092 Low_complexity Low_complexity 1432 chr1 111043917 111044845 CR1-D2 717 + 111043917 111044845 0 2 201,257, 0,671, +,+, 72126 LINE CR1 1432 chr1 111050115 111050267 (T)n 818 + 111050115 111050267 0 2 75,22, 0,130, +,+, 72130 Simple_repeat Simple_repeat 1432 chr1 111069918 111070277 GGLTR4A 660 + 111069918 111070277 0 2 226,102, 0,257, +,+, 72143 LTR ERVL 1432 chr1 111082763 111084390 CR1-F2 615 + 111082763 111084390 0 2 1271,355, 0,1272, +,+, 72150 LINE CR1 1432 chr1 111112702 111113156 CR1-E 795 - 111112702 111113156 0 2 249,200, 0,254, -,-, 72161 LINE CR1 1432 chr1 111135024 111137048 Charlie12_GG 490 - 111135024 111137048 0 2 544,928, 0,1096, -,-, 72173 DNA hAT-Charlie 1432 chr1 111141643 111144738 CR1-L3A_Croc 109 - 111141643 111144738 0 3 364,228,420, 0,1873,2675, -,-,-, 72178 LINE CR1 1433 chr1 111181924 111182447 CR1-C4 374 + 111181924 111182447 0 2 405,118, 0,405, +,+, 72206 LINE CR1 1433 chr1 111227622 111228241 CR1-C4 541 - 111227622 111228241 0 2 242,377, 0,242, -,-, 72244 LINE CR1 1433 chr1 111252524 111253673 GGLTR5A 438 + 111252524 111253673 0 2 286,168, 0,981, +,+, 72267 LTR ERVL 1433 chr1 111252810 111253505 Mariner1_GG 533 - 111252810 111253505 0 2 200,492, 0,203, -,-, 72268 DNA TcMar-Mariner 1434 chr1 111316868 111318585 CR1-Y1_Aves 384 - 111316868 111318585 0 2 394,923, 0,794, -,-, 72308 LINE CR1 1434 chr1 111322203 111322608 CR1-D 838 + 111322203 111322608 0 2 291,58, 0,347, +,+, 72312 LINE CR1 1434 chr1 111327384 111328814 CR1-C3 717 - 111327384 111328814 0 2 423,372, 0,1058, -,-, 72315 LINE CR1 1434 chr1 111365960 111367731 CR1-Y 532 - 111365960 111367731 0 2 1077,220, 0,1551, -,-, 72345 LINE CR1 1434 chr1 111377728 111378058 GGCAN 873 - 111377728 111378058 0 2 82,213, 0,117, -,-, 72352 Unknown Unknown 1434 chr1 111385861 111387305 CR1-D2 672 + 111385861 111387305 0 2 635,808, 0,636, +,+, 72364 LINE CR1 1435 chr1 111412306 111412647 GGERV10_LTR 637 + 111412306 111412647 0 2 64,169, 0,172, +,+, 72377 LTR ERVL 1435 chr1 111425954 111426620 CR1-Y4 539 - 111425954 111426620 0 2 472,111, 0,555, -,-, 72387 LINE CR1 1435 chr1 111438550 111439368 CR1-D2 711 + 111438550 111439368 0 2 455,266, 0,552, +,+, 72398 LINE CR1 1435 chr1 111464285 111464878 GGLTR5B 638 - 111464285 111464878 0 2 58,497, 0,96, -,-, 72412 LTR ERVL 1435 chr1 111524871 111525598 CR1-H 434 - 111524871 111525598 0 2 234,493, 0,234, -,-, 72451 LINE CR1 1435 chr1 111535486 111536550 REP131 175 - 111535486 111536550 0 2 299,98, 0,966, -,-, 72457 DNA? DNA? 1436 chr1 111552966 111553285 CR1-Y4 615 - 111552966 111553285 0 2 197,120, 0,199, -,-, 72466 LINE CR1 1436 chr1 111649134 111649786 CR1-Y4 372 + 111649134 111649786 0 3 91,368,173, 0,91,479, +,+,+, 72529 LINE CR1 1436 chr1 111654082 111654879 CR1-Y1_Aves 570 + 111654082 111654879 0 2 757,40, 0,757, +,+, 72534 LINE CR1 1436 chr1 111669887 111669934 (TTTTCC)n 816 + 111669887 111669934 0 2 8,9, 0,38, +,+, 72543 Simple_repeat Simple_repeat 1437 chr1 111701474 111701863 CR1-C4 615 + 111701474 111701863 0 2 126,263, 0,126, +,+, 72566 LINE CR1 1437 chr1 111752120 111752185 (TATTTTC)n 348 + 111752120 111752185 0 2 15,6, 0,59, +,+, 72599 Simple_repeat Simple_repeat 1437 chr1 111787014 111787574 CR1-Y4 593 + 111787014 111787574 0 2 162,388, 0,172, +,+, 72617 LINE CR1 1437 chr1 111791075 111792049 CR1-C4 530 + 111791075 111792049 0 2 444,509, 0,465, +,+, 72620 LINE CR1 1437 chr1 111800879 111802097 CR1-Y1_Aves 492 + 111800879 111802097 0 2 730,361, 0,857, +,+, 72630 LINE CR1 1438 chr1 111812486 111813408 CR1-Y1_Aves 429 + 111812486 111813408 0 3 121,279,512, 0,130,410, +,+,+, 72638 LINE CR1 1438 chr1 111872217 111872775 CR1-H 756 + 111872217 111872775 0 2 212,295, 0,263, +,+, 72676 LINE CR1 1438 chr1 111880793 111880963 GGLTR5A 412 - 111880793 111880963 0 2 89,62, 0,108, -,-, 72685 LTR ERVL 1438 chr1 111886617 111887849 CR1-C4 511 + 111886617 111887849 0 2 128,1104, 0,128, +,+, 72691 LINE CR1 1438 chr1 111892523 111893190 GGLTR5A 436 - 111892523 111893190 0 2 275,292, 0,375, -,-, 72698 LTR ERVL 1439 chr1 111972822 111973561 CR1-H2 467 - 111972822 111973561 0 2 577,162, 0,577, -,-, 72739 LINE CR1 1439 chr1 112056888 112057576 GGLTR5A 663 - 112056888 112057576 0 2 440,82, 0,606, -,-, 72774 LTR ERVL 1441 chr1 112229766 112229955 CR1-C4 582 - 112229766 112229955 0 2 122,67, 0,122, -,-, 72861 LINE CR1 1441 chr1 112232709 112234261 CR1-Y4 62 - 112232709 112234261 0 2 448,1102, 0,450, -,-, 72864 LINE CR1 1441 chr1 112233157 112234533 CR1-Y1_Aves 56 - 112233157 112234533 0 2 96,254, 0,1122, -,-, 72865 LINE CR1 1442 chr1 112363258 112363336 (GCTGC)n 356 + 112363258 112363336 0 2 6,43, 0,35, +,+, 72944 Simple_repeat Simple_repeat 1442 chr1 112458945 112459353 CR1-Y2_Aves 179 - 112458945 112459353 0 2 243,150, 0,258, -,-, 73035 LINE CR1 1443 chr1 112526547 112527800 CR1-Y4 662 - 112526547 112527800 0 4 74,57,471,42, 0,74,132,1211, -,-,-,-, 73074 LINE CR1 1444 chr1 112610119 112610233 CR1-C3 590 + 112610119 112610233 0 2 52,14, 0,100, +,+, 73135 LINE CR1 1444 chr1 112649708 112654112 CR1-H2 625 - 112649708 112654112 0 2 77,622, 0,3782, -,-, 73160 LINE CR1 1446 chr1 112889913 112891511 CR1-Y1_Aves 498 + 112889913 112891511 0 2 130,463, 0,1135, +,+, 73306 LINE CR1 1446 chr1 112954909 112956408 CR1-E 695 - 112954909 112956408 0 3 765,170,549, 0,780,950, -,-,-, 73332 LINE CR1 1447 chr1 112986225 112987909 CR1-F0 696 + 112986225 112987909 0 2 991,46, 0,1638, +,+, 73344 LINE CR1 1448 chr1 113158846 113160632 CR1-F0 562 + 113158846 113160632 0 2 1451,335, 0,1451, +,+, 73448 LINE CR1 1448 chr1 113171390 113173160 CR1-F0 558 + 113171390 113173160 0 2 1435,335, 0,1435, +,+, 73452 LINE CR1 1448 chr1 113189815 113191711 GGLTR7-int 218 + 113189815 113191711 0 2 475,300, 0,1596, +,+, 73459 LTR ERV1 1448 chr1 113210927 113211998 CR1-F2 526 + 113210927 113211998 0 2 77,992, 0,79, +,+, 73467 LINE CR1 1449 chr1 113258941 113259453 GGLTR8B 575 + 113258941 113259453 0 2 75,433, 0,79, +,+, 73497 LTR ERVL 1449 chr1 113335910 113336273 GGCAN 887 - 113335910 113336273 0 2 88,213, 0,150, -,-, 73531 Unknown Unknown 1449 chr1 113340124 113342822 CR1-C4 268 - 113340124 113342822 0 2 902,220, 0,2478, -,-, 73538 LINE CR1 1449 chr1 113352821 113353197 GGCAN 882 - 113352821 113353197 0 2 88,213, 0,163, -,-, 73549 Unknown Unknown 1449 chr1 113354973 113356091 CR1-Y4 473 - 113354973 113356091 0 2 922,138, 0,980, -,-, 73556 LINE CR1 1449 chr1 113355895 113358468 CR1-D 410 - 113355895 113358468 0 3 179,140,220, 0,1737,2353, -,-,-, 73557 LINE CR1 1449 chr1 113368511 113368894 GGCAN 876 - 113368511 113368894 0 2 88,213, 0,170, -,-, 73568 Unknown Unknown 1449 chr1 113369850 113370275 (GGAGA)n 742 + 113369850 113370275 0 2 177,189, 0,236, +,+, 73572 Simple_repeat Simple_repeat 1449 chr1 113372476 113372727 CR1-Y4 420 + 113372476 113372727 0 2 165,86, 0,165, +,+, 73577 LINE CR1 1450 chr1 113386935 113388918 CR1-L3B_Croc 57 + 113386935 113388918 0 2 1124,375, 0,1608, +,+, 73585 LINE CR1 1450 chr1 113410470 113411010 GGLTR8B 470 + 113410470 113411010 0 2 96,444, 0,96, +,+, 73602 LTR ERVL 1450 chr1 113418434 113421085 CR1-C4 548 - 113418434 113421085 0 2 2409,242, 0,2409, -,-, 73608 LINE CR1 1450 chr1 113422312 113425634 CR1-E 344 - 113422312 113425634 0 3 89,266,422, 0,2634,2900, -,-,-, 73609 LINE CR1 1450 chr1 113457183 113457469 GGLTR8A 688 - 113457183 113457469 0 2 243,41, 0,245, -,-, 73630 LTR ERVL 1451 chr1 113565861 113566192 Char12Mar1_GG 558 - 113565861 113566192 0 2 257,74, 0,257, -,-, 73687 DNA hAT-Charlie 1451 chr1 113571385 113571771 CR1-C4 652 + 113571385 113571771 0 2 119,251, 0,135, +,+, 73691 LINE CR1 1452 chr1 113658923 113659556 CR1-Y1_Aves 504 - 113658923 113659556 0 2 47,168, 0,465, -,-, 73755 LINE CR1 1452 chr1 113659552 113660129 CR1-Y2_Aves 521 - 113659552 113660129 0 2 544,33, 0,544, -,-, 73759 LINE CR1 1452 chr1 113695756 113696467 CR1-X 598 - 113695756 113696467 0 2 454,257, 0,454, -,-, 73786 LINE CR1 1452 chr1 113718375 113719219 CR1-Y2_Aves 285 - 113718375 113719219 0 3 292,186,331, 0,304,513, -,-,-, 73803 LINE CR1 1453 chr1 113804391 113805354 CR1-H 872 - 113804391 113805354 0 2 676,180, 0,783, -,-, 73859 LINE CR1 1453 chr1 113809299 113809467 CR1-Y4 497 - 113809299 113809467 0 2 106,62, 0,106, -,-, 73866 LINE CR1 1453 chr1 113811734 113812060 GGCAN 876 + 113811734 113812060 0 2 212,83, 0,243, +,+, 73872 Unknown Unknown 1453 chr1 113822074 113824771 CR1-Y 450 + 113822074 113824771 0 2 220,2002, 0,695, +,+, 73881 LINE CR1 1454 chr1 113909065 113912520 Char12Mar1_GG 564 - 113909065 113912520 0 2 267,236, 0,3219, -,-, 73945 DNA hAT-Charlie 1454 chr1 113920841 113922012 GGLTR5A 474 - 113920841 113922012 0 2 204,263, 0,908, -,-, 73950 LTR ERVL 1454 chr1 113941936 113945135 CR1-D 486 + 113941936 113945135 0 2 47,163, 0,3036, +,+, 73969 LINE CR1 1454 chr1 113981609 113981885 CR1-Y4 621 - 113981609 113981885 0 2 111,165, 0,111, -,-, 73998 LINE CR1 1454 chr1 113982833 113984457 CR1-Y 413 + 113982833 113984457 0 2 263,1346, 0,278, +,+, 74002 LINE CR1 1454 chr1 113995868 113998711 CR1-Y 543 + 113995868 113998711 0 2 1518,227, 0,2616, +,+, 74017 LINE CR1 1454 chr1 113998710 113998958 CR1-Y4 629 - 113998710 113998958 0 2 83,165, 0,83, -,-, 74020 LINE CR1 1455 chr1 114056942 114057625 CR1-Y1_Aves 409 + 114056942 114057625 0 2 295,152, 0,531, +,+, 74066 LINE CR1 1455 chr1 114059180 114065015 GGERV10_LTR 965 + 114059180 114065015 0 3 229,5385,220, 0,230,5615, +,+,+, 74068 LTR ERVL 1455 chr1 114117832 114118739 CR1-X2 329 + 114117832 114118739 0 2 87,474, 0,433, +,+, 74091 LINE CR1 1455 chr1 114120793 114122259 GGLTR8A 579 + 114120793 114122259 0 2 229,832, 0,634, +,+, 74096 LTR ERVL 1455 chr1 114152782 114153538 CR1-X2 507 - 114152782 114153538 0 2 528,220, 0,536, -,-, 74123 LINE CR1 1456 chr1 114237577 114241791 CR1-Y3 618 + 114237577 114241791 0 3 1531,680,308, 0,2638,3906, +,+,+, 74190 LINE CR1 1456 chr1 114257360 114264474 CR1-Y 446 + 114257360 114264474 0 3 114,263,974, 0,5862,6140, +,+,+, 74215 LINE CR1 1456 chr1 114283611 114284093 Char12Mar1_GG 671 - 114283611 114284093 0 2 40,221, 0,261, -,-, 74240 DNA hAT-Charlie 1457 chr1 114358996 114359713 CR1-H2 307 + 114358996 114359713 0 2 128,180, 0,537, +,+, 74288 LINE CR1 1457 chr1 114361369 114362991 CR1-Y2_Aves 300 - 114361369 114362991 0 4 133,649,193,411, 0,337,1006,1211, -,-,-,-, 74290 LINE CR1 1458 chr1 114431894 114432694 GGLTR8B 282 + 114431894 114432694 0 2 502,241, 0,559, +,+, 74321 LTR ERVL 1458 chr1 114452453 114453410 CR1-Y1_Aves 114 + 114452453 114453410 0 2 386,323, 0,634, +,+, 74334 LINE CR1 1460 chr1 114724404 114725579 CR1-Y2_Aves 100 + 114724404 114725579 0 2 603,555, 0,620, +,+, 74496 LINE CR1 1460 chr1 114730157 114730914 Char12Mar1_GG 572 - 114730157 114730914 0 2 386,138, 0,619, -,-, 74503 DNA hAT-Charlie 1460 chr1 114773242 114774327 CR1-C4 505 - 114773242 114774327 0 2 339,746, 0,339, -,-, 74549 LINE CR1 1461 chr1 114831907 114832535 CR1-D2 463 - 114831907 114832535 0 2 477,151, 0,477, -,-, 74596 LINE CR1 1461 chr1 114836234 114836776 GGLTR5A 283 - 114836234 114836776 0 2 97,361, 0,181, -,-, 74600 LTR ERVL 1461 chr1 114873528 114873969 TguLTR5e 261 - 114873528 114873969 0 2 210,88, 0,353, -,-, 74631 LTR ERVL 1462 chr1 114990285 114990320 (ATTT)n 564 + 114990285 114990320 0 2 6,10, 0,25, +,+, 74712 Simple_repeat Simple_repeat 1463 chr1 115131315 115131608 REP131 391 - 115131315 115131608 0 2 64,207, 0,86, -,-, 74810 DNA? DNA? 1463 chr1 115170236 115171051 GGLTR8A 697 - 115170236 115171051 0 2 768,47, 0,768, -,-, 74830 LTR ERVL 1464 chr1 115257062 115258107 CR1-F2 228 + 115257062 115258107 0 2 484,437, 0,608, +,+, 74901 LINE CR1 1464 chr1 115276551 115276673 (T)n 629 + 115276551 115276673 0 2 39,36, 0,86, +,+, 74915 Simple_repeat Simple_repeat 1465 chr1 115351972 115353560 CR1-Y2_Aves 353 + 115351972 115353560 0 2 1078,127, 0,1461, +,+, 74980 LINE CR1 1466 chr1 115498718 115498994 CR1-Y4 620 - 115498718 115498994 0 2 111,165, 0,111, -,-, 75041 LINE CR1 1466 chr1 115500041 115501588 CR1-Y 474 + 115500041 115501588 0 2 199,1348, 0,199, +,+, 75046 LINE CR1 1466 chr1 115513556 115515249 CR1-Y 550 + 115513556 115515249 0 2 937,262, 0,1431, +,+, 75056 LINE CR1 1467 chr1 115610572 115612261 CR1-Y 546 + 115610572 115612261 0 2 936,261, 0,1428, +,+, 75075 LINE CR1 1467 chr1 115613051 115615081 CR1-Y3 539 + 115613051 115615081 0 2 1106,405, 0,1625, +,+, 75081 LINE CR1 1467 chr1 115644394 115646875 CR1-Y2_Aves 209 - 115644394 115646875 0 5 449,976,200,118,166, 0,581,1570,2076,2315, -,-,-,-,-, 75103 LINE CR1 1468 chr1 115782468 115782900 CR1-Y2_Aves 287 - 115782468 115782900 0 2 120,312, 0,120, -,-, 75185 LINE CR1 1468 chr1 115848045 115852758 CR1-Y4 521 + 115848045 115852758 0 3 1511,227,523, 0,2607,4190, +,+,+, 75232 LINE CR1 1468 chr1 115850870 115851126 CR1-Y4 595 - 115850870 115851126 0 2 91,165, 0,91, -,-, 75235 LINE CR1 1468 chr1 115860053 115860873 CR1-Y2_Aves 197 + 115860053 115860873 0 2 276,255, 0,565, +,+, 75245 LINE CR1 1470 chr1 116020799 116021499 Charlie12_GG 511 - 116020799 116021499 0 2 495,203, 0,497, -,-, 75365 DNA hAT-Charlie 1470 chr1 116021499 116021775 CR1-Y4 660 + 116021499 116021775 0 2 187,89, 0,187, +,+, 75366 LINE CR1 1470 chr1 116090316 116090402 (T)n 719 + 116090316 116090402 0 2 31,24, 0,62, +,+, 75421 Simple_repeat Simple_repeat 1471 chr1 116166164 116167285 GGLTR8A 550 + 116166164 116167285 0 2 914,83, 0,1038, +,+, 75483 LTR ERVL 1471 chr1 116180317 116180696 CR1-Y4 490 + 116180317 116180696 0 2 142,237, 0,142, +,+, 75492 LINE CR1 1471 chr1 116188821 116189550 GGLTR11-int 428 + 116188821 116189550 0 3 141,105,225, 0,317,504, +,+,+, 75501 LTR ERV1 1471 chr1 116219957 116221036 CR1-D 778 - 116219957 116221036 0 2 583,496, 0,583, -,-, 75528 LINE CR1 1471 chr1 116255319 116255734 GGLTR3C1 272 - 116255319 116255734 0 2 144,96, 0,319, -,-, 75556 LTR ERVL 1472 chr1 116271350 116271604 CR1-H 474 - 116271350 116271604 0 2 106,148, 0,106, -,-, 75570 LINE CR1 1472 chr1 116296176 116300882 Char12Mar1_GG 610 - 116296176 116300882 0 2 86,73, 0,4633, -,-, 75595 DNA hAT-Charlie 1472 chr1 116303235 116303663 CR1-Y2_Aves 312 - 116303235 116303663 0 2 171,221, 0,207, -,-, 75602 LINE CR1 1472 chr1 116327193 116328015 CR1-Y1_Aves 525 + 116327193 116328015 0 2 650,172, 0,650, +,+, 75628 LINE CR1 1472 chr1 116345166 116346541 CR1-Y4 501 - 116345166 116346541 0 2 831,544, 0,831, -,-, 75649 LINE CR1 1472 chr1 116350839 116352291 CR1-Y3 628 - 116350839 116352291 0 2 338,571, 0,881, -,-, 75655 LINE CR1 1472 chr1 116358359 116359069 CR1-F 515 - 116358359 116359069 0 2 78,632, 0,78, -,-, 75658 LINE CR1 1472 chr1 116365463 116365844 GGLTR8A 602 + 116365463 116365844 0 2 143,238, 0,143, +,+, 75664 LTR ERVL 1472 chr1 116384543 116385122 CR1-C4 634 - 116384543 116385122 0 2 269,310, 0,269, -,-, 75680 LINE CR1 22 chr1 116391594 116392035 TguLTR5e 467 - 116391594 116392035 0 2 62,282, 0,159, -,-, 75685 LTR ERVL 1473 chr1 116420463 116421157 CR1-X2 448 - 116420463 116421157 0 2 112,573, 0,121, -,-, 75718 LINE CR1 1473 chr1 116430095 116431500 CR1-C4 399 + 116430095 116431500 0 3 139,542,724, 0,139,681, +,+,+, 75725 LINE CR1 1473 chr1 116434341 116434481 GGLTR4B 683 - 116434341 116434481 0 2 46,94, 0,46, -,-, 75729 LTR ERVL 1473 chr1 116460235 116461132 CR1-D2 650 + 116460235 116461132 0 3 255,73,566, 0,258,331, +,+,+, 75754 LINE CR1 1473 chr1 116468352 116468433 (TCTT)n 334 + 116468352 116468433 0 2 18,32, 0,49, +,+, 75760 Simple_repeat Simple_repeat 1473 chr1 116482726 116482837 (A)n 783 + 116482726 116482837 0 2 24,35, 0,76, +,+, 75774 Simple_repeat Simple_repeat 1474 chr1 116564126 116564644 REP131 340 - 116564126 116564644 0 3 126,149,59, 0,168,459, -,-,-, 75846 DNA? DNA? 1474 chr1 116585854 116585980 GGLTR3A 948 + 116585854 116585980 0 2 70,56, 0,70, +,+, 75870 LTR ERVL 1474 chr1 116606873 116607094 CR1-C4 710 - 116606873 116607094 0 2 128,93, 0,128, -,-, 75893 LINE CR1 1474 chr1 116636056 116636816 CR1-C3 645 - 116636056 116636816 0 2 705,37, 0,723, -,-, 75915 LINE CR1 1474 chr1 116638653 116639002 CR1-X 598 + 116638653 116639002 0 2 66,283, 0,66, +,+, 75917 LINE CR1 1474 chr1 116642207 116642773 CR1-Y2_Aves 248 + 116642207 116642773 0 2 368,122, 0,444, +,+, 75922 LINE CR1 1475 chr1 116706506 116709415 CR1-D 282 - 116706506 116709415 0 2 2466,289, 0,2620, -,-, 75960 LINE CR1 1475 chr1 116777533 116777940 GGLTR12C 604 + 116777533 116777940 0 2 105,293, 0,114, +,+, 76010 LTR ERVL 1476 chr1 116869058 116871069 CR1-Y1_Aves 496 - 116869058 116871069 0 3 1076,91,153, 0,1076,1858, -,-,-, 76077 LINE CR1 1476 chr1 116881621 116882509 CR1-Y4 536 - 116881621 116882509 0 2 207,156, 0,732, -,-, 76094 LINE CR1 1476 chr1 116882884 116884892 GGLTR8B 443 + 116882884 116884892 0 2 705,132, 0,1876, +,+, 76096 LTR ERVL 1476 chr1 116891530 116891597 (TTATTTG)n 340 + 116891530 116891597 0 2 14,21, 0,46, +,+, 76104 Simple_repeat Simple_repeat 1476 chr1 116896517 116898293 CR1-F 572 + 116896517 116898293 0 2 410,1363, 0,413, +,+, 76111 LINE CR1 1476 chr1 116900085 116900215 A-rich 348 + 116900085 116900215 0 2 70,11, 0,119, +,+, 76115 Low_complexity Low_complexity 1477 chr1 116920875 116921600 Mariner1_GG 504 + 116920875 116921600 0 2 106,535, 0,190, +,+, 76136 DNA TcMar-Mariner 1477 chr1 116954773 116955174 CR1-G 412 - 116954773 116955174 0 2 210,180, 0,221, -,-, 76167 LINE CR1 1477 chr1 116973774 116977359 CR1-Y4 519 - 116973774 116977359 0 2 287,342, 0,3243, -,-, 76185 LINE CR1 1477 chr1 116984342 116985266 CR1-F2 585 + 116984342 116985266 0 2 99,133, 0,791, +,+, 76199 LINE CR1 1477 chr1 116999215 117000000 CR1-C4 511 + 116999215 117000000 0 2 382,403, 0,382, +,+, 76213 LINE CR1 1477 chr1 117021221 117021727 Char12Mar1_GG 609 - 117021221 117021727 0 2 199,284, 0,222, -,-, 76239 DNA hAT-Charlie 1477 chr1 117044653 117045667 CR1-E 236 - 117044653 117045667 0 3 88,326,219, 0,266,795, -,-,-, 76256 LINE CR1 1478 chr1 117057137 117070595 Charlie12_GG 652 - 117057137 117070595 0 2 46,46, 0,13412, -,-, 76269 DNA hAT-Charlie 1478 chr1 117061377 117062783 CR1-C4 484 - 117061377 117062783 0 2 510,364, 0,1042, -,-, 76274 LINE CR1 1478 chr1 117071125 117071521 TguLTR5d 320 + 117071125 117071521 0 2 93,86, 0,310, +,+, 76285 LTR ERVL 1478 chr1 117074795 117076562 CR1-C4 532 - 117074795 117076562 0 2 519,708, 0,1059, -,-, 76287 LINE CR1 1478 chr1 117081369 117083334 CR1-H 228 + 117081369 117083334 0 2 601,484, 0,1481, +,+, 76295 LINE CR1 1478 chr1 117085458 117086960 CR1-H 827 - 117085458 117086960 0 2 138,58, 0,1444, -,-, 76300 LINE CR1 1478 chr1 117092465 117096322 Mariner1_GG 646 - 117092465 117096322 0 2 933,86, 0,3771, -,-, 76310 DNA TcMar-Mariner 1478 chr1 117104450 117105748 CR1-C4 527 - 117104450 117105748 0 2 911,382, 0,916, -,-, 76318 LINE CR1 1478 chr1 117109182 117109467 GGLTR8B 344 + 117109182 117109467 0 2 186,90, 0,195, +,+, 76323 LTR ERVL 1478 chr1 117118803 117119174 GGLTR3C1 361 - 117118803 117119174 0 2 140,199, 0,172, -,-, 76335 LTR ERVL 1478 chr1 117124691 117125517 CR1-Y1_Aves 375 - 117124691 117125517 0 2 318,336, 0,490, -,-, 76341 LINE CR1 1478 chr1 117133829 117134330 GGLTR3F2 754 + 117133829 117134330 0 2 232,230, 0,271, +,+, 76350 LTR ERVL 1478 chr1 117147602 117148077 GGLTR3F2 672 + 117147602 117148077 0 2 229,200, 0,275, +,+, 76367 LTR ERVL 1478 chr1 117149837 117151782 CR1-F2 544 + 117149837 117151782 0 2 627,200, 0,1745, +,+, 76370 LINE CR1 1479 chr1 117249564 117249630 (TGT)n 364 + 117249564 117249630 0 2 10,16, 0,50, +,+, 76459 Simple_repeat Simple_repeat 1480 chr1 117313118 117314358 Char12Mar1_GG 506 - 117313118 117314358 0 2 393,339, 0,901, -,-, 76510 DNA hAT-Charlie 1480 chr1 117385784 117386542 CR1-Y4 584 + 117385784 117386542 0 2 287,386, 0,372, +,+, 76567 LINE CR1 1480 chr1 117407120 117407813 CR1-C4 514 - 117407120 117407813 0 3 329,71,293, 0,329,400, -,-,-, 76587 LINE CR1 1480 chr1 117429622 117430559 CR1-Y3 704 + 117429622 117430559 0 2 78,309, 0,628, +,+, 76608 LINE CR1 1480 chr1 117429702 117430252 CR1-C2 781 + 117429702 117430252 0 2 435,115, 0,435, +,+, 76609 LINE CR1 1480 chr1 117431147 117431423 CR1-Y4 616 - 117431147 117431423 0 2 111,165, 0,111, -,-, 76610 LINE CR1 1480 chr1 117436387 117436708 GGCAN 644 + 117436387 117436708 0 2 184,87, 0,234, +,+, 76621 Unknown Unknown 1481 chr1 117499605 117500000 Mariner1_GG 494 - 117499605 117500000 0 2 161,234, 0,161, -,-, 76625 DNA TcMar-Mariner 1481 chr1 117534696 117535374 CR1-X2 475 + 117534696 117535374 0 2 170,191, 0,487, +,+, 76657 LINE CR1 1482 chr1 117603406 117605893 CR1-Y1_Aves 525 + 117603406 117605893 0 2 1551,101, 0,2386, +,+, 76700 LINE CR1 1482 chr1 117625196 117626080 Char12Mar1_GG 714 - 117625196 117626080 0 2 480,79, 0,805, -,-, 76715 DNA hAT-Charlie 1482 chr1 117660410 117663068 CR1-X 573 + 117660410 117663068 0 3 115,565,445, 0,1648,2213, +,+,+, 76739 LINE CR1 1482 chr1 117660522 117662061 CR1-D 697 - 117660522 117662061 0 2 1428,111, 0,1428, -,-, 76740 LINE CR1 1483 chr1 117743228 117744504 CR1-C4 508 + 117743228 117744504 0 2 1157,107, 0,1169, +,+, 76782 LINE CR1 1484 chr1 117839746 117839786 (CTCCC)n 476 + 117839746 117839786 0 2 7,10, 0,30, +,+, 76839 Simple_repeat Simple_repeat 1484 chr1 117923170 117927932 Char12Mar1_GG 572 - 117923170 117927932 0 2 480,34, 0,4728, -,-, 76896 DNA hAT-Charlie 1484 chr1 117926719 117926903 CR1-Y1_Aves 342 + 117926719 117926903 0 2 48,136, 0,48, +,+, 76900 LINE CR1 1485 chr1 117965801 117967335 CR1-X2 443 + 117965801 117967335 0 3 428,260,473, 0,713,1061, +,+,+, 76929 LINE CR1 1485 chr1 118017584 118019015 CR1-Y2_Aves 342 - 118017584 118019015 0 2 1038,325, 0,1106, -,-, 76961 LINE CR1 1485 chr1 118048679 118050372 CR1-F2 496 - 118048679 118050372 0 2 121,207, 0,1486, -,-, 76983 LINE CR1 1486 chr1 118112529 118116189 CR1-Y2_Aves 385 - 118112529 118116189 0 2 100,422, 0,3238, -,-, 77013 LINE CR1 1486 chr1 118131807 118132322 TguLTR5e 361 + 118131807 118132322 0 2 268,176, 0,339, +,+, 77023 LTR ERVL 1486 chr1 118147918 118150186 CR1-F2 695 + 118147918 118150186 0 2 419,77, 0,2191, +,+, 77031 LINE CR1 1486 chr1 118152340 118155448 CR1-F2 511 + 118152340 118155448 0 2 379,97, 0,3011, +,+, 77034 LINE CR1 1487 chr1 118259251 118260516 Mariner1_GG 574 - 118259251 118260516 0 2 443,716, 0,549, -,-, 77107 DNA TcMar-Mariner 1487 chr1 118279762 118280303 CR1-C4 590 + 118279762 118280303 0 2 196,160, 0,381, +,+, 77122 LINE CR1 1487 chr1 118302483 118303483 CR1-H 880 + 118302483 118303483 0 2 492,508, 0,492, +,+, 77133 LINE CR1 1487 chr1 118351002 118352270 CR1-E 517 - 118351002 118352270 0 2 439,829, 0,439, -,-, 77164 LINE CR1 1489 chr1 118516915 118517541 GGLTR11 504 + 118516915 118517541 0 2 43,344, 0,282, +,+, 77261 LTR ERV1 1489 chr1 118521240 118523722 CR1-D2 779 + 118521240 118523722 0 2 370,65, 0,2417, +,+, 77265 LINE CR1 1489 chr1 118534782 118535311 CR1-L3B_Croc 298 - 118534782 118535311 0 2 188,155, 0,374, -,-, 77275 LINE CR1 1489 chr1 118548175 118548845 CR1-D2 401 + 118548175 118548845 0 2 140,530, 0,140, +,+, 77283 LINE CR1 1490 chr1 118626219 118627004 CR1-Y2_Aves 425 + 118626219 118627004 0 3 188,61,333, 0,391,452, +,+,+, 77329 LINE CR1 1490 chr1 118640126 118641373 CR1-X 556 - 118640126 118641373 0 2 193,1054, 0,193, -,-, 77338 LINE CR1 1490 chr1 118646723 118647386 CR1-L3A_Croc 217 + 118646723 118647386 0 2 210,107, 0,556, +,+, 77342 LINE CR1 1490 chr1 118686829 118687619 Char12Mar1_GG 717 - 118686829 118687619 0 2 540,250, 0,540, -,-, 77365 DNA hAT-Charlie 1490 chr1 118748925 118749887 CR1-C4 650 - 118748925 118749887 0 2 491,379, 0,583, -,-, 77399 LINE CR1 1491 chr1 118775843 118776494 GGLTR3E1 594 - 118775843 118776494 0 2 268,343, 0,308, -,-, 77416 LTR ERVL 1491 chr1 118806610 118807677 CR1-L3B_Croc 115 - 118806610 118807677 0 2 214,552, 0,515, -,-, 77442 LINE CR1 1491 chr1 118855527 118859139 CR1-H2 485 + 118855527 118859139 0 2 45,67, 0,3545, +,+, 77480 LINE CR1 1491 chr1 118878480 118879290 CR1-Y2_Aves 303 - 118878480 118879290 0 2 268,159, 0,651, -,-, 77496 LINE CR1 1493 chr1 119131037 119133352 CR1-D 471 - 119131037 119133352 0 2 1811,504, 0,1811, -,-, 77619 LINE CR1 1494 chr1 119145813 119145943 CR1-C4 664 - 119145813 119145943 0 2 17,31, 0,99, -,-, 77625 LINE CR1 1494 chr1 119171527 119171595 (ATAA)n 358 + 119171527 119171595 0 2 29,14, 0,54, +,+, 77635 Simple_repeat Simple_repeat 1495 chr1 119305764 119306729 CR1-C4 624 + 119305764 119306729 0 2 592,373, 0,592, +,+, 77720 LINE CR1 1495 chr1 119379653 119380390 CR1-C4 628 - 119379653 119380390 0 2 242,199, 0,538, -,-, 77769 LINE CR1 1495 chr1 119405360 119405966 CR1-F2 496 - 119405360 119405966 0 2 223,383, 0,223, -,-, 77784 LINE CR1 1497 chr1 119543448 119543562 (TA)n 450 + 119543448 119543562 0 2 7,55, 0,59, +,+, 77863 Simple_repeat Simple_repeat 1497 chr1 119547524 119549187 CR1-Y4 601 - 119547524 119549187 0 2 345,508, 0,1155, -,-, 77870 LINE CR1 1497 chr1 119547828 119548683 CR1-H 842 + 119547828 119548683 0 2 461,394, 0,461, +,+, 77871 LINE CR1 1497 chr1 119562925 119563762 GGLTR5A 438 + 119562925 119563762 0 2 235,153, 0,684, +,+, 77879 LTR ERVL 1497 chr1 119571136 119572836 CR1-H 898 + 119571136 119572836 0 2 248,537, 0,1163, +,+, 77883 LINE CR1 1497 chr1 119589424 119590808 CR1-C4 517 - 119589424 119590808 0 3 214,627,350, 0,404,1034, -,-,-, 77894 LINE CR1 1497 chr1 119598686 119600700 CR1-B 904 + 119598686 119600700 0 2 809,1205, 0,809, +,+, 77903 LINE CR1 1498 chr1 119669144 119669261 (AT)n 180 + 119669144 119669261 0 2 9,55, 0,62, +,+, 77946 Simple_repeat Simple_repeat 1498 chr1 119674031 119675399 CR1-F 521 + 119674031 119675399 0 2 155,1213, 0,155, +,+, 77950 LINE CR1 1498 chr1 119746783 119747648 GGLTR8B 240 + 119746783 119747648 0 3 340,146,255, 0,401,610, +,+,+, 77992 LTR ERVL 1498 chr1 119763291 119764777 CR1-Y1_Aves 382 + 119763291 119764777 0 2 540,206, 0,1280, +,+, 78000 LINE CR1 1499 chr1 119844243 119845727 CR1-Y2_Aves 393 - 119844243 119845727 0 2 97,1338, 0,146, -,-, 78047 LINE CR1 1499 chr1 119848081 119848697 CR1-Y2_Aves 200 - 119848081 119848697 0 2 29,281, 0,335, -,-, 78050 LINE CR1 1499 chr1 119861709 119867538 CR1-Y4 529 - 119861709 119867538 0 2 455,125, 0,5704, -,-, 78064 LINE CR1 1500 chr1 119968458 119969364 CR1-C2 748 - 119968458 119969364 0 2 86,95, 0,811, -,-, 78124 LINE CR1 1500 chr1 119980857 119980931 (GCAGCG)n 496 + 119980857 119980931 0 2 38,7, 0,67, +,+, 78131 Simple_repeat Simple_repeat 1500 chr1 120005030 120005443 GGLTR5B 690 - 120005030 120005443 0 2 206,196, 0,217, -,-, 78144 LTR ERVL 1500 chr1 120020002 120022721 CR1-E 718 - 120020002 120022721 0 4 888,1153,127,551, 0,888,2041,2168, -,-,-,-, 78152 LINE CR1 1500 chr1 120056443 120057096 CR1-Y2_Aves 139 + 120056443 120057096 0 2 410,233, 0,420, +,+, 78169 LINE CR1 1501 chr1 120138740 120139449 CR1-Y4 627 + 120138740 120139449 0 2 141,314, 0,395, +,+, 78216 LINE CR1 1502 chr1 120249245 120249686 CR1-L3B_Croc 171 + 120249245 120249686 0 2 210,137, 0,304, +,+, 78267 LINE CR1 1502 chr1 120316540 120316837 Char12Mar1_GG 675 - 120316540 120316837 0 2 141,156, 0,141, -,-, 78305 DNA hAT-Charlie 1503 chr1 120387581 120388202 CR1-E 459 - 120387581 120388202 0 2 162,436, 0,185, -,-, 78346 LINE CR1 1504 chr1 120512371 120512788 (GAAA)n 854 + 120512371 120512788 0 2 183,214, 0,203, +,+, 78420 Simple_repeat Simple_repeat 1504 chr1 120556488 120557521 CR1-F2 638 + 120556488 120557521 0 2 74,959, 0,74, +,+, 78441 LINE CR1 23 chr1 120584837 120586304 CR1-Y2_Aves 166 + 120584837 120586304 0 3 232,176,119, 0,947,1348, +,+,+, 78452 LINE CR1 1505 chr1 120587346 120588803 CR1-F2 913 - 120587346 120588803 0 2 546,651, 0,806, -,-, 78453 LINE CR1 1506 chr1 120791075 120791253 GGLTR5B 454 - 120791075 120791253 0 2 83,95, 0,83, -,-, 78563 LTR ERVL 1506 chr1 120803186 120803579 CR1-L3B_Croc 235 + 120803186 120803579 0 2 111,236, 0,157, +,+, 78569 LINE CR1 1506 chr1 120830592 120833142 CR1-D2 634 - 120830592 120833142 0 2 1031,602, 0,1948, -,-, 78585 LINE CR1 1507 chr1 120899191 120901396 GGERVL-C-int 463 - 120899191 120901396 0 3 521,1561,123, 0,521,2082, -,-,-, 78635 LTR ERVL 1507 chr1 120901389 120902412 GGERVL-B-int 241 - 120901389 120902412 0 2 719,192, 0,831, -,-, 78636 LTR ERVL 1507 chr1 120912354 120913105 GGLTR8B 237 + 120912354 120913105 0 2 284,467, 0,284, +,+, 78647 LTR ERVL 1507 chr1 120915117 120915852 CR1-Y2_Aves 140 - 120915117 120915852 0 2 243,311, 0,424, -,-, 78649 LINE CR1 1508 chr1 120980979 120981298 CR1-X2 553 + 120980979 120981298 0 2 84,235, 0,84, +,+, 78693 LINE CR1 1509 chr1 121113083 121114558 X2_LINE 186 + 121113083 121114558 0 2 411,789, 0,686, +,+, 78780 LINE CR1 1509 chr1 121181699 121181982 CR1-X1 645 + 121181699 121181982 0 2 115,168, 0,115, +,+, 78820 LINE CR1 1510 chr1 121274300 121275374 CR1-Y 596 + 121274300 121275374 0 2 572,501, 0,573, +,+, 78874 LINE CR1 1510 chr1 121342000 121342607 CR1-Y4 579 - 121342000 121342607 0 2 331,276, 0,331, -,-, 78908 LINE CR1 1511 chr1 121486179 121487184 CR1-Y2_Aves 270 + 121486179 121487184 0 2 149,740, 0,265, +,+, 78984 LINE CR1 1512 chr1 121513863 121516196 CR1-Y2_Aves 240 - 121513863 121516196 0 2 460,253, 0,2080, -,-, 79001 LINE CR1 1512 chr1 121526938 121528737 CR1-Y2_Aves 309 + 121526938 121528737 0 2 728,402, 0,1397, +,+, 79011 LINE CR1 1512 chr1 121527666 121528315 CR1-Y4 392 + 121527666 121528315 0 2 438,211, 0,438, +,+, 79012 LINE CR1 1512 chr1 121548498 121549233 CR1-11_Crp 208 + 121548498 121549233 0 2 185,308, 0,427, +,+, 79025 LINE CR1 1512 chr1 121578783 121579214 CR1-F2 543 + 121578783 121579214 0 2 72,359, 0,72, +,+, 79055 LINE CR1 1512 chr1 121588205 121589109 CR1-F2 556 + 121588205 121589109 0 2 516,369, 0,535, +,+, 79058 LINE CR1 1512 chr1 121633663 121633834 CR1-Y4 570 - 121633663 121633834 0 2 111,60, 0,111, -,-, 79087 LINE CR1 1513 chr1 121636224 121636576 GGCAN 834 + 121636224 121636576 0 2 212,88, 0,264, +,+, 79095 Unknown Unknown 1513 chr1 121646541 121649302 CR1-Y 456 + 121646541 121649302 0 2 220,2066, 0,695, +,+, 79104 LINE CR1 1513 chr1 121675254 121675360 GGLTR5B 712 + 121675254 121675360 0 2 53,27, 0,79, +,+, 79131 LTR ERVL 1513 chr1 121727387 121728546 CR1-L3A_Croc 314 + 121727387 121728546 0 2 167,73, 0,1086, +,+, 79177 LINE CR1 1514 chr1 121811077 121811256 CR1-F2 410 + 121811077 121811256 0 2 109,70, 0,109, +,+, 79229 LINE CR1 1514 chr1 121817192 121818525 CR1-F2 521 - 121817192 121818525 0 2 121,516, 0,817, -,-, 79234 LINE CR1 189 chr1 121894200 121897917 CR1-C3 590 - 121894200 121897917 0 2 3538,179, 0,3538, -,-, 79272 LINE CR1 1515 chr1 121981917 121982169 Char12Mar1_GG 643 - 121981917 121982169 0 2 86,154, 0,98, -,-, 79315 DNA hAT-Charlie 1515 chr1 121995316 121995799 CR1-Y1_Aves 428 - 121995316 121995799 0 2 251,221, 0,262, -,-, 79324 LINE CR1 1515 chr1 122010737 122011006 GGLTR5B 748 - 122010737 122011006 0 2 167,102, 0,167, -,-, 79339 LTR ERVL 1515 chr1 122011670 122012051 CR1-Y2_Aves 267 - 122011670 122012051 0 2 115,261, 0,120, -,-, 79342 LINE CR1 1516 chr1 122067100 122068191 CR1-C4 536 - 122067100 122068191 0 2 293,677, 0,414, -,-, 79380 LINE CR1 1516 chr1 122099226 122099348 (TTTCTTC)n 302 + 122099226 122099348 0 2 75,6, 0,116, +,+, 79397 Simple_repeat Simple_repeat 1516 chr1 122107438 122109099 CR1-F2 555 + 122107438 122109099 0 2 75,152, 0,1509, +,+, 79402 LINE CR1 1517 chr1 122164224 122164614 (GAAAA)n 875 + 122164224 122164614 0 2 189,184, 0,206, +,+, 79438 Simple_repeat Simple_repeat 1517 chr1 122209845 122210569 CR1-C4 535 - 122209845 122210569 0 2 433,291, 0,433, -,-, 79475 LINE CR1 1517 chr1 122213335 122214050 CR1-D2 584 + 122213335 122214050 0 2 295,420, 0,295, +,+, 79476 LINE CR1 1518 chr1 122404821 122405412 UCON84 234 - 122404821 122405412 0 2 200,181, 0,410, -,-, 79573 Unknown Unknown 1520 chr1 122585687 122586291 TguLTR5e 236 + 122585687 122586291 0 2 192,130, 0,474, +,+, 79700 LTR ERVL 1520 chr1 122615904 122616424 CR1-Y2_Aves 397 + 122615904 122616424 0 2 193,310, 0,210, +,+, 79720 LINE CR1 1520 chr1 122616097 122618666 CR1-D2 189 + 122616097 122618666 0 2 23,259, 0,2310, +,+, 79721 LINE CR1 1520 chr1 122625378 122626112 CR1-Y2_Aves 308 + 122625378 122626112 0 3 178,87,377, 0,190,357, +,+,+, 79732 LINE CR1 1520 chr1 122657948 122658799 CR1-F2 559 + 122657948 122658799 0 2 511,339, 0,512, +,+, 79756 LINE CR1 1521 chr1 122708797 122709336 Z-REP 260 + 122708797 122709336 0 2 214,19, 0,520, +,+, 79781 Satellite macro 1521 chr1 122712196 122713308 CR1-B2 795 - 122712196 122713308 0 2 113,985, 0,127, -,-, 79784 LINE CR1 1521 chr1 122716596 122716942 CR1-Y3 581 - 122716596 122716942 0 2 40,306, 0,40, -,-, 79787 LINE CR1 1521 chr1 122716927 122719236 CR1-Y4 545 + 122716927 122719236 0 2 427,153, 0,2156, +,+, 79788 LINE CR1 1521 chr1 122728766 122733375 CR1-Y4 488 + 122728766 122733375 0 3 515,1154,1229, 0,1023,3380, +,+,+, 79796 LINE CR1 1521 chr1 122729285 122729789 GGLTR12C 741 + 122729285 122729789 0 2 381,123, 0,381, +,+, 79797 LTR ERVL 1521 chr1 122731118 122731923 CR1-Y4 591 - 122731118 122731923 0 3 111,51,117, 0,111,688, -,-,-, 79798 LINE CR1 1521 chr1 122741201 122743939 CR1-Y 469 + 122741201 122743939 0 2 177,2068, 0,670, +,+, 79809 LINE CR1 1521 chr1 122759401 122760050 GGLTR8A 243 + 122759401 122760050 0 2 419,230, 0,419, +,+, 79824 LTR ERVL 1521 chr1 122782195 122783016 CR1-Y1_Aves 453 + 122782195 122783016 0 2 90,572, 0,249, +,+, 79834 LINE CR1 1522 chr1 122819866 122821007 CR1-D2 813 + 122819866 122821007 0 2 245,37, 0,1104, +,+, 79855 LINE CR1 1522 chr1 122872857 122873599 CR1-Y1_Aves 453 - 122872857 122873599 0 2 520,222, 0,520, -,-, 79893 LINE CR1 1523 chr1 123012599 123012935 GGCAN 843 - 123012599 123012935 0 2 83,213, 0,123, -,-, 79979 Unknown Unknown 1524 chr1 123080881 123081330 CR1-Y2_Aves 288 - 123080881 123081330 0 2 310,77, 0,372, -,-, 80039 LINE CR1 1524 chr1 123103644 123105699 CR1-Y2_Aves 101 + 123103644 123105699 0 2 566,761, 0,1294, +,+, 80054 LINE CR1 1524 chr1 123124429 123124883 CR1-L3B_Croc 156 - 123124429 123124883 0 2 125,270, 0,184, -,-, 80071 LINE CR1 1524 chr1 123156729 123156793 (AAC)n 600 + 123156729 123156793 0 2 9,10, 0,54, +,+, 80088 Simple_repeat Simple_repeat 1524 chr1 123166237 123170069 CR1-D2 567 + 123166237 123170069 0 4 617,501,492,210, 0,676,1504,3622, +,+,+,+, 80095 LINE CR1 1525 chr1 123235805 123236950 CR1-C4 599 + 123235805 123236950 0 2 635,371, 0,774, +,+, 80134 LINE CR1 1525 chr1 123334290 123335045 CR1-11_Crp 233 - 123334290 123335045 0 2 211,254, 0,501, -,-, 80183 LINE CR1 1526 chr1 123342530 123342927 CR1-D2 334 - 123342530 123342927 0 2 193,130, 0,267, -,-, 80187 LINE CR1 1526 chr1 123383351 123383667 CR1-Y2_Aves 315 - 123383351 123383667 0 2 136,155, 0,161, -,-, 80221 LINE CR1 1526 chr1 123383663 123384737 CR1-Y2_Aves 206 - 123383663 123384737 0 2 431,117, 0,957, -,-, 80222 LINE CR1 1526 chr1 123417433 123417935 TguLTR5e 262 + 123417433 123417935 0 2 253,145, 0,357, +,+, 80243 LTR ERVL 1526 chr1 123443857 123446345 CR1-Y1_Aves 429 - 123443857 123446345 0 3 162,300,154, 0,185,2334, -,-,-, 80256 LINE CR1 1527 chr1 123497493 123498176 Char12Mar1_GG 550 - 123497493 123498176 0 2 493,167, 0,516, -,-, 80282 DNA hAT-Charlie 1527 chr1 123515904 123516695 CR1-Y4 624 - 123515904 123516695 0 2 677,89, 0,702, -,-, 80300 LINE CR1 1527 chr1 123570941 123571310 CR1-E 745 + 123570941 123571310 0 2 269,100, 0,269, +,+, 80329 LINE CR1 1527 chr1 123596824 123597652 GGLTR5A 209 + 123596824 123597652 0 2 277,222, 0,606, +,+, 80347 LTR ERVL 1528 chr1 123624913 123627462 CR1-Y2_Aves 188 - 123624913 123627462 0 2 571,1978, 0,571, -,-, 80363 LINE CR1 1528 chr1 123677536 123680551 CR1-F2 448 + 123677536 123680551 0 2 477,103, 0,2912, +,+, 80394 LINE CR1 1528 chr1 123678013 123680448 Charlie12_GG 514 - 123678013 123680448 0 2 1153,1085, 0,1350, -,-, 80395 DNA hAT-Charlie 1529 chr1 123746997 123747086 (T)n 724 + 123746997 123747086 0 2 24,25, 0,64, +,+, 80435 Simple_repeat Simple_repeat 1529 chr1 123813397 123814851 CR1-C4 587 - 123813397 123814851 0 2 895,559, 0,895, -,-, 80475 LINE CR1 1531 chr1 124019857 124020309 Char12Mar1_GG 566 - 124019857 124020309 0 2 165,183, 0,269, -,-, 80592 DNA hAT-Charlie 1531 chr1 124022801 124024622 CR1-H 871 + 124022801 124024622 0 2 832,982, 0,839, +,+, 80600 LINE CR1 1532 chr1 124126264 124126761 CR1-Y 798 - 124126264 124126761 0 2 289,208, 0,289, -,-, 80649 LINE CR1 1532 chr1 124138792 124139163 CR1-11_Crp 124 + 124138792 124139163 0 2 32,174, 0,197, +,+, 80662 LINE CR1 1532 chr1 124192544 124193137 CR1-11_Crp 210 + 124192544 124193137 0 2 197,178, 0,415, +,+, 80699 LINE CR1 1532 chr1 124253653 124255048 CR1-C 704 + 124253653 124255048 0 2 111,1284, 0,111, +,+, 80723 LINE CR1 1533 chr1 124331689 124333583 CR1-C 793 + 124331689 124333583 0 2 1227,88, 0,1806, +,+, 80766 LINE CR1 1533 chr1 124356695 124357572 CR1-C4 465 + 124356695 124357572 0 2 100,693, 0,184, +,+, 80775 LINE CR1 1533 chr1 124383901 124384230 GGCAN 942 + 124383901 124384230 0 2 204,84, 0,245, +,+, 80803 Unknown Unknown 1534 chr1 124394146 124397598 CR1-Y 433 + 124394146 124397598 0 2 331,1352, 0,2100, +,+, 80811 LINE CR1 1534 chr1 124394752 124395027 CR1-Y4 669 - 124394752 124395027 0 2 107,168, 0,107, -,-, 80812 LINE CR1 1534 chr1 124399226 124399555 GGCAN 942 + 124399226 124399555 0 2 204,84, 0,245, +,+, 80821 Unknown Unknown 1534 chr1 124409458 124412302 CR1-Y 397 + 124409458 124412302 0 2 331,762, 0,2082, +,+, 80828 LINE CR1 1534 chr1 124410065 124410340 CR1-Y4 669 - 124410065 124410340 0 2 107,168, 0,107, -,-, 80829 LINE CR1 1534 chr1 124467062 124467257 GGERVL-C-int 820 + 124467062 124467257 0 2 56,139, 0,56, +,+, 80858 LTR ERVL 1534 chr1 124517230 124517281 (TTCTCT)n 620 + 124517230 124517281 0 2 14,10, 0,41, +,+, 80891 Simple_repeat Simple_repeat 1535 chr1 124551996 124553182 Char12Mar1_GG 544 - 124551996 124553182 0 2 976,203, 0,983, -,-, 80912 DNA hAT-Charlie 1535 chr1 124575799 124577234 Char12Mar1_GG 562 + 124575799 124577234 0 2 1233,174, 0,1261, +,+, 80923 DNA hAT-Charlie 1537 chr1 124852338 124853198 CR1-F2 459 + 124852338 124853198 0 2 369,491, 0,369, +,+, 81074 LINE CR1 1538 chr1 124985117 124985939 CR1-Y2 294 - 124985117 124985939 0 2 109,201, 0,621, -,-, 81136 LINE CR1 1539 chr1 125136656 125136721 (TTTTGTTT)n 588 + 125136656 125136721 0 2 14,6, 0,59, +,+, 81206 Simple_repeat Simple_repeat 1540 chr1 125262219 125266819 CR1-L3B_Croc 147 + 125262219 125266819 0 4 379,247,86,434, 0,706,1106,4166, +,+,+,+, 81269 LINE CR1 1541 chr1 125315693 125316613 CR1-F2 605 - 125315693 125316613 0 3 315,68,537, 0,315,383, -,-,-, 81292 LINE CR1 1541 chr1 125348705 125349218 CR1-L3A_Croc 210 - 125348705 125349218 0 3 143,122,105, 0,267,408, -,-,-, 81313 LINE CR1 1541 chr1 125384179 125384726 CR1-C4 405 - 125384179 125384726 0 2 82,465, 0,82, -,-, 81341 LINE CR1 1542 chr1 125444183 125445767 CR1-Y2_Aves 227 + 125444183 125445767 0 2 760,272, 0,1312, +,+, 81369 LINE CR1 1542 chr1 125444973 125445498 CR1-E 526 + 125444973 125445498 0 2 123,396, 0,129, +,+, 81371 LINE CR1 1542 chr1 125564210 125565039 CR1-D2 603 - 125564210 125565039 0 2 426,84, 0,745, -,-, 81438 LINE CR1 1543 chr1 125576111 125577557 CR1-Y2_Aves 234 + 125576111 125577557 0 2 86,185, 0,1261, +,+, 81443 LINE CR1 1543 chr1 125682060 125682507 GGLTR5B 366 - 125682060 125682507 0 2 368,74, 0,373, -,-, 81506 LTR ERVL 1543 chr1 125689425 125690309 CR1-L3B_Croc 188 + 125689425 125690309 0 2 288,225, 0,659, +,+, 81514 LINE CR1 1544 chr1 125700878 125703086 Mariner1_GG 587 - 125700878 125703086 0 2 704,482, 0,1726, -,-, 81521 DNA TcMar-Mariner 1544 chr1 125723669 125724404 CR1-C3 667 - 125723669 125724404 0 2 543,192, 0,543, -,-, 81539 LINE CR1 1545 chr1 125863610 125864373 CR1-H 745 + 125863610 125864373 0 2 557,204, 0,559, +,+, 81635 LINE CR1 1545 chr1 125874176 125874831 GGLTR8A 580 + 125874176 125874831 0 3 187,110,120, 0,187,535, +,+,+, 81642 LTR ERVL 1545 chr1 125883332 125883614 Char12Mar1_GG 654 - 125883332 125883614 0 2 201,81, 0,201, -,-, 81649 DNA hAT-Charlie 1545 chr1 125916462 125916854 CR1-X2 433 - 125916462 125916854 0 2 59,333, 0,59, -,-, 81677 LINE CR1 1545 chr1 125928935 125931334 Charlie12_GG 520 - 125928935 125931334 0 3 171,489,1358, 0,363,1041, -,-,-, 81685 DNA hAT-Charlie 1545 chr1 125937123 125938786 CR1-Y4 515 - 125937123 125938786 0 2 557,1106, 0,557, -,-, 81690 LINE CR1 1545 chr1 125948757 125948884 A-rich 654 + 125948757 125948884 0 2 52,27, 0,100, +,+, 81702 Low_complexity Low_complexity 1546 chr1 125964345 125967918 CR1-F2 475 - 125964345 125967918 0 2 953,267, 0,3306, -,-, 81713 LINE CR1 1546 chr1 125965860 125967649 CR1-Y 765 + 125965860 125967649 0 2 363,578, 0,1211, +,+, 81715 LINE CR1 1546 chr1 126001660 126007409 GGERVL-B-int 832 + 126001660 126007409 0 2 476,5271, 0,478, +,+, 81751 LTR ERVL 1546 chr1 126007409 126007922 GGERVL-C-int 894 + 126007409 126007922 0 2 36,477, 0,36, +,+, 81752 LTR ERVL 1546 chr1 126016173 126016249 (CTTTT)n 288 + 126016173 126016249 0 2 34,7, 0,69, +,+, 81761 Simple_repeat Simple_repeat 1546 chr1 126037062 126039360 CR1-G 843 + 126037062 126039360 0 2 1206,1092, 0,1206, +,+, 81782 LINE CR1 1546 chr1 126044769 126045266 CR1-Y1_Aves 407 + 126044769 126045266 0 2 248,249, 0,248, +,+, 81787 LINE CR1 1546 chr1 126055494 126055560 (TTTCTC)n 436 + 126055494 126055560 0 2 27,18, 0,48, +,+, 81801 Simple_repeat Simple_repeat 1547 chr1 126110658 126111061 CR1-C3 690 - 126110658 126111061 0 2 133,187, 0,216, -,-, 81824 LINE CR1 1547 chr1 126118859 126121418 CR1-Y 502 - 126118859 126121418 0 2 2302,257, 0,2302, -,-, 81833 LINE CR1 1547 chr1 126135521 126136986 CR1-C3 560 - 126135521 126136986 0 2 573,874, 0,591, -,-, 81842 LINE CR1 1547 chr1 126140365 126140750 GGLTR5B 591 - 126140365 126140750 0 2 86,87, 0,298, -,-, 81847 LTR ERVL 1547 chr1 126166365 126166881 CR1-X2 587 + 126166365 126166881 0 2 372,134, 0,382, +,+, 81877 LINE CR1 1548 chr1 126259972 126260052 (T)n 837 + 126259972 126260052 0 2 29,21, 0,59, +,+, 81950 Simple_repeat Simple_repeat 1548 chr1 126337827 126340899 CR1-F 921 - 126337827 126340899 0 2 1883,309, 0,2763, -,-, 82026 LINE CR1 1549 chr1 126377986 126380545 CR1-C4 470 + 126377986 126380545 0 3 317,791,460, 0,317,2099, +,+,+, 82059 LINE CR1 1549 chr1 126379088 126380093 CR1-E 659 + 126379088 126380093 0 2 903,102, 0,903, +,+, 82060 LINE CR1 1549 chr1 126384714 126387085 CR1-C4 569 + 126384714 126387085 0 2 1040,797, 0,1574, +,+, 82063 LINE CR1 1549 chr1 126421787 126421948 (AACA)n 278 + 126421787 126421948 0 2 81,35, 0,126, +,+, 82095 Simple_repeat Simple_repeat 1549 chr1 126446324 126447357 CR1-Y2_Aves 324 + 126446324 126447357 0 2 416,418, 0,615, +,+, 82116 LINE CR1 1549 chr1 126454101 126454226 GGLTR3B3 711 - 126454101 126454226 0 2 43,82, 0,43, -,-, 82122 LTR ERVL 1549 chr1 126458110 126458173 (TTTTTT)n 258 + 126458110 126458173 0 2 27,19, 0,44, +,+, 82128 Simple_repeat Simple_repeat 1549 chr1 126461915 126462314 CR1-B2 696 - 126461915 126462314 0 2 334,65, 0,334, -,-, 82132 LINE CR1 1550 chr1 126490073 126490438 GGLTR8A 503 + 126490073 126490438 0 2 251,113, 0,252, +,+, 82156 LTR ERVL 1550 chr1 126518457 126519310 CR1-L3A_Croc 220 + 126518457 126519310 0 2 143,204, 0,649, +,+, 82185 LINE CR1 1550 chr1 126547847 126554079 Char12Mar1_GG 647 - 126547847 126554079 0 2 57,487, 0,5745, -,-, 82203 DNA hAT-Charlie 1550 chr1 126558472 126558922 CR1-Y1_Aves 201 - 126558472 126558922 0 2 169,174, 0,276, -,-, 82208 LINE CR1 1550 chr1 126562618 126565100 CR1-Y1_Aves 440 + 126562618 126565100 0 2 253,193, 0,2289, +,+, 82213 LINE CR1 1550 chr1 126574245 126574309 (TTTG)n 642 + 126574245 126574309 0 2 8,21, 0,43, +,+, 82226 Simple_repeat Simple_repeat 1550 chr1 126585142 126586035 CR1-L3A_Croc 78 + 126585142 126586035 0 2 334,471, 0,422, +,+, 82243 LINE CR1 1550 chr1 126601157 126603518 GGLTR5A 370 - 126601157 126603518 0 2 144,339, 0,2022, -,-, 82265 LTR ERVL 1550 chr1 126601311 126603129 CR1-C 858 + 126601311 126603129 0 2 501,1317, 0,501, +,+, 82266 LINE CR1 1551 chr1 126625156 126626920 CR1-F 616 - 126625156 126626920 0 2 1598,161, 0,1603, -,-, 82284 LINE CR1 1551 chr1 126657471 126662128 CR1-Y4 165 + 126657471 126662128 0 2 630,788, 0,3869, +,+, 82324 LINE CR1 1551 chr1 126660367 126661359 CR1-X 208 + 126660367 126661359 0 2 830,142, 0,850, +,+, 82326 LINE CR1 1551 chr1 126669282 126670765 CR1-D 384 - 126669282 126670765 0 2 1032,435, 0,1048, -,-, 82341 LINE CR1 1551 chr1 126682858 126683672 CR1-E 448 + 126682858 126683672 0 2 146,150, 0,664, +,+, 82354 LINE CR1 1551 chr1 126685443 126686202 CR1-Y3 682 + 126685443 126686202 0 2 209,550, 0,209, +,+, 82359 LINE CR1 1551 chr1 126690116 126691780 CR1-F 401 + 126690116 126691780 0 3 236,190,1199, 0,274,465, +,+,+, 82364 LINE CR1 1551 chr1 126702327 126702398 (T)n 944 + 126702327 126702398 0 2 28,19, 0,52, +,+, 82376 Simple_repeat Simple_repeat 1551 chr1 126709592 126709652 (ATTT)n 550 + 126709592 126709652 0 2 11,8, 0,52, +,+, 82384 Simple_repeat Simple_repeat 1551 chr1 126717011 126717637 CR1-H2 318 - 126717011 126717637 0 2 123,64, 0,562, -,-, 82394 LINE CR1 1551 chr1 126719874 126720400 GGLTR5A 201 - 126719874 126720400 0 2 142,354, 0,172, -,-, 82400 LTR ERVL 1552 chr1 126749690 126750884 CR1-E 677 - 126749690 126750884 0 2 1139,55, 0,1139, -,-, 82430 LINE CR1 1552 chr1 126785926 126787345 CR1-Y2_Aves 157 - 126785926 126787345 0 4 318,23,347,186, 0,440,651,1233, -,-,-,-, 82468 LINE CR1 1552 chr1 126803404 126805983 CR1-X 499 + 126803404 126805983 0 3 609,49,1285, 0,610,1294, +,+,+, 82492 LINE CR1 1552 chr1 126829885 126829968 (TTTGTT)n 374 + 126829885 126829968 0 2 15,7, 0,76, +,+, 82515 Simple_repeat Simple_repeat 1552 chr1 126838074 126844480 Char12Mar1_GG 449 - 126838074 126844480 0 4 40,27,66,451, 0,5798,5864,5955, -,-,-,-, 82522 DNA hAT-Charlie 1552 chr1 126849464 126850114 GGLTR8A 447 - 126849464 126850114 0 2 601,49, 0,601, -,-, 82539 LTR ERVL 1552 chr1 126863130 126863675 Char12Mar1_GG 488 + 126863130 126863675 0 2 119,401, 0,144, +,+, 82548 DNA hAT-Charlie 1552 chr1 126867226 126867932 GGLTR12C 428 + 126867226 126867932 0 2 103,315, 0,391, +,+, 82554 LTR ERVL 1552 chr1 126869310 126871177 CR1-F 347 - 126869310 126871177 0 2 1003,864, 0,1003, -,-, 82557 LINE CR1 1552 chr1 126874727 126875349 TguLTR5e 216 - 126874727 126875349 0 2 93,495, 0,127, -,-, 82563 LTR ERVL 1553 chr1 126947523 126947862 Z-REP 238 + 126947523 126947862 0 2 81,232, 0,107, +,+, 82643 Satellite macro 1553 chr1 126958587 126959939 CR1-E 401 - 126958587 126959939 0 2 889,434, 0,918, -,-, 82663 LINE CR1 1553 chr1 126962101 126964314 CR1-E 306 + 126962101 126964314 0 2 2026,181, 0,2032, +,+, 82666 LINE CR1 1553 chr1 126969681 126973123 CR1-F2 552 - 126969681 126973123 0 2 131,590, 0,2852, -,-, 82674 LINE CR1 1554 chr1 127028105 127029703 CR1-C4 513 - 127028105 127029703 0 3 460,793,73, 0,490,1525, -,-,-, 82721 LINE CR1 1554 chr1 127081493 127084409 GGLTR10D-int 803 - 127081493 127084409 0 2 2552,364, 0,2552, -,-, 82773 LTR ERVK 1554 chr1 127084617 127085167 Char12Mar1_GG 396 - 127084617 127085167 0 2 19,39, 0,511, -,-, 82774 DNA hAT-Charlie 1554 chr1 127091142 127093041 CR1-F2 548 - 127091142 127093041 0 2 584,301, 0,1598, -,-, 82785 LINE CR1 1554 chr1 127133783 127134754 ENS1B-LTR 452 - 127133783 127134754 0 2 446,418, 0,553, -,-, 82826 LTR ERVL 1555 chr1 127164279 127165133 GGLTR8B 524 + 127164279 127165133 0 2 360,262, 0,592, +,+, 82854 LTR ERVL 1555 chr1 127167146 127167777 CR1-D2 619 + 127167146 127167777 0 2 140,491, 0,140, +,+, 82856 LINE CR1 1555 chr1 127173400 127174367 CR1-X2 499 + 127173400 127174367 0 3 120,293,417, 0,171,550, +,+,+, 82868 LINE CR1 1555 chr1 127190628 127191217 CR1-D2 588 + 127190628 127191217 0 2 162,423, 0,166, +,+, 82890 LINE CR1 1555 chr1 127224456 127227565 CR1-B 860 + 127224456 127227565 0 2 2207,902, 0,2207, +,+, 82927 LINE CR1 1555 chr1 127251289 127253006 CR1-D 470 + 127251289 127253006 0 3 61,241,1406, 0,61,311, +,+,+, 82956 LINE CR1 1556 chr1 127273501 127275220 CR1-D 467 + 127273501 127275220 0 3 61,243,1406, 0,61,313, +,+,+, 82974 LINE CR1 1556 chr1 127300665 127302914 CR1-X2 391 + 127300665 127302914 0 3 181,362,651, 0,734,1598, +,+,+, 83000 LINE CR1 1556 chr1 127309589 127312616 CR1-F2 518 - 127309589 127312616 0 2 112,254, 0,2773, -,-, 83011 LINE CR1 1556 chr1 127313331 127313550 Char12Mar1_GG 722 - 127313331 127313550 0 2 102,70, 0,149, -,-, 83017 DNA hAT-Charlie 1556 chr1 127317150 127317680 TguLTR5d 208 + 127317150 127317680 0 2 275,42, 0,488, +,+, 83027 LTR ERVL 1556 chr1 127322231 127325646 CR1-X2 484 + 127322231 127325646 0 3 316,216,877, 0,2126,2538, +,+,+, 83037 LINE CR1 1556 chr1 127322546 127324198 CR1-F2 352 - 127322546 127324198 0 2 75,1577, 0,75, -,-, 83038 LINE CR1 1556 chr1 127329510 127330484 CR1-D 659 - 127329510 127330484 0 2 278,696, 0,278, -,-, 83042 LINE CR1 1556 chr1 127332602 127334239 GGLTR5B 264 + 127332602 127334239 0 2 120,452, 0,1185, +,+, 83045 LTR ERVL 1556 chr1 127340305 127341257 CR1-E 357 - 127340305 127341257 0 3 186,253,340, 0,186,612, -,-,-, 83052 LINE CR1 1556 chr1 127344189 127345083 TguLTR5e 206 + 127344189 127345083 0 2 236,156, 0,738, +,+, 83058 LTR ERVL 1556 chr1 127357640 127358416 GGLTR12C 571 + 127357640 127358416 0 2 108,252, 0,524, +,+, 83073 LTR ERVL 1556 chr1 127391826 127392483 GGLTR5A 338 - 127391826 127392483 0 2 227,332, 0,325, -,-, 83107 LTR ERVL 1557 chr1 127404370 127404641 CR1-B2 401 + 127404370 127404641 0 2 117,66, 0,205, +,+, 83129 LINE CR1 1557 chr1 127408291 127411259 GGERVL-A-int 823 - 127408291 127411259 0 4 1312,963,159,534, 0,1312,2275,2434, -,-,-,-, 83134 LTR ERVL 1557 chr1 127439866 127440637 CR1-D 667 + 127439866 127440637 0 2 142,629, 0,142, +,+, 83176 LINE CR1 1557 chr1 127461355 127463838 CR1-C4 585 - 127461355 127463838 0 2 139,413, 0,2070, -,-, 83198 LINE CR1 1557 chr1 127461489 127463426 CR1-C 824 + 127461489 127463426 0 2 101,1368, 0,569, +,+, 83199 LINE CR1 1557 chr1 127476344 127476444 A-rich 304 + 127476344 127476444 0 2 41,18, 0,82, +,+, 83223 Low_complexity Low_complexity 1557 chr1 127486337 127486965 REP131 196 + 127486337 127486965 0 2 147,251, 0,377, +,+, 83236 DNA? DNA? 1557 chr1 127493689 127495079 CR1-C2 719 + 127493689 127495079 0 3 407,57,171, 0,1025,1219, +,+,+, 83247 LINE CR1 1557 chr1 127500693 127501503 CR1-Y1_Aves 405 - 127500693 127501503 0 2 57,185, 0,625, -,-, 83262 LINE CR1 1557 chr1 127517114 127517536 GGERVL18-LTR 534 - 127517114 127517536 0 2 145,232, 0,190, -,-, 83283 LTR ERVL 1557 chr1 127521127 127521681 GGLTR3G1 431 - 127521127 127521681 0 2 42,512, 0,42, -,-, 83289 LTR ERVL 1558 chr1 127572099 127572318 GGLTR5B 602 + 127572099 127572318 0 2 114,101, 0,118, +,+, 83346 LTR ERVL 1558 chr1 127579094 127581037 CR1-E 717 + 127579094 127581037 0 2 1179,764, 0,1179, +,+, 83362 LINE CR1 1558 chr1 127584760 127585706 CR1-E 464 - 127584760 127585706 0 2 97,244, 0,702, -,-, 83365 LINE CR1 1558 chr1 127584857 127586738 CR1-D2 285 - 127584857 127586738 0 2 60,1039, 0,842, -,-, 83366 LINE CR1 1558 chr1 127602276 127603978 CR1-Y1_Aves 185 - 127602276 127603978 0 3 363,192,552, 0,943,1150, -,-,-, 83391 LINE CR1 1558 chr1 127610248 127610303 A-rich 526 + 127610248 127610303 0 2 14,15, 0,40, +,+, 83399 Low_complexity Low_complexity 1558 chr1 127630345 127630935 TguLTR5e 193 - 127630345 127630935 0 3 154,97,165, 0,231,425, -,-,-, 83419 LTR ERVL 1558 chr1 127657650 127660591 CR1-F2 481 - 127657650 127660591 0 3 439,579,1923, 0,439,1018, -,-,-, 83446 LINE CR1 1559 chr1 127667673 127668533 GGLTR8A 496 + 127667673 127668533 0 2 203,657, 0,203, +,+, 83453 LTR ERVL 1559 chr1 127669232 127682610 Char12Mar1_GG 607 - 127669232 127682610 0 2 38,534, 0,12844, -,-, 83454 DNA hAT-Charlie 1559 chr1 127676878 127677426 CR1-E 229 + 127676878 127677426 0 2 141,115, 0,433, +,+, 83464 LINE CR1 1559 chr1 127706184 127707044 GGLTR8B 255 - 127706184 127707044 0 2 261,454, 0,406, -,-, 83487 LTR ERVL 1559 chr1 127715998 127716520 CR1-F2 300 - 127715998 127716520 0 2 324,198, 0,324, -,-, 83496 LINE CR1 1559 chr1 127757413 127759073 CR1-E 706 - 127757413 127759073 0 2 1108,312, 0,1348, -,-, 83546 LINE CR1 1559 chr1 127780107 127780830 CR1-X2 474 - 127780107 127780830 0 3 161,196,354, 0,173,369, -,-,-, 83571 LINE CR1 1559 chr1 127782502 127782757 CR1-Y2_Aves 335 + 127782502 127782757 0 2 175,77, 0,178, +,+, 83572 LINE CR1 1559 chr1 127792183 127793784 CR1-X2 527 - 127792183 127793784 0 2 1498,103, 0,1498, -,-, 83587 LINE CR1 1560 chr1 127805293 127806789 CR1-Y2_Aves 225 - 127805293 127806789 0 2 138,1353, 0,143, -,-, 83603 LINE CR1 1560 chr1 127852548 127853750 CR1-C4 329 + 127852548 127853750 0 2 215,882, 0,320, +,+, 83658 LINE CR1 1560 chr1 127864671 127867196 CR1-Y2 145 - 127864671 127867196 0 3 196,540,353, 0,453,2172, -,-,-, 83675 LINE CR1 1560 chr1 127894279 127895024 GGLTR8A 395 + 127894279 127895024 0 3 135,273,71, 0,191,674, +,+,+, 83712 LTR ERVL 1561 chr1 127930929 127931524 CR1-B2 520 + 127930929 127931524 0 2 430,135, 0,460, +,+, 83750 LINE CR1 1561 chr1 127939414 127940977 CR1-B2 621 + 127939414 127940977 0 2 276,861, 0,702, +,+, 83761 LINE CR1 1561 chr1 127951896 127954454 CR1-D2 517 + 127951896 127954454 0 3 280,230,134, 0,280,2424, +,+,+, 83776 LINE CR1 1561 chr1 127991072 127991561 GGLTR3F1 901 + 127991072 127991561 0 2 231,209, 0,280, +,+, 83810 LTR ERVL 1561 chr1 128004689 128010013 CR1-X2 504 + 128004689 128010013 0 4 668,230,100,357, 0,668,4300,4967, +,+,+,+, 83828 LINE CR1 1561 chr1 128052630 128053923 CR1-C4 530 - 128052630 128053923 0 2 520,265, 0,1028, -,-, 83864 LINE CR1 1562 chr1 128069042 128069707 GGLTR8A 340 + 128069042 128069707 0 2 231,424, 0,241, +,+, 83877 LTR ERVL 1562 chr1 128091865 128092397 GGLTR8A 478 + 128091865 128092397 0 2 292,240, 0,292, +,+, 83893 LTR ERVL 1562 chr1 128093721 128095721 CR1-Y 491 - 128093721 128095721 0 2 968,508, 0,1492, -,-, 83896 LINE CR1 1562 chr1 128094702 128095210 GGLTR12C 729 - 128094702 128095210 0 2 125,383, 0,125, -,-, 83897 LTR ERVL 1562 chr1 128099249 128101153 CR1-Y2 517 - 128099249 128101153 0 2 273,51, 0,1853, -,-, 83901 LINE CR1 1562 chr1 128105171 128105661 REP131 294 - 128105171 128105661 0 2 243,247, 0,243, -,-, 83911 DNA? DNA? 1562 chr1 128121145 128121566 CR1-D 713 - 128121145 128121566 0 2 95,326, 0,95, -,-, 83928 LINE CR1 1562 chr1 128172898 128173215 CR1-E 497 - 128172898 128173215 0 2 90,227, 0,90, -,-, 83960 LINE CR1 195 chr1 128186989 128191450 Char12Mar1_GG 680 - 128186989 128191450 0 2 560,41, 0,4420, -,-, 83973 DNA hAT-Charlie 1563 chr1 128274653 128274711 A-rich 500 + 128274653 128274711 0 2 24,15, 0,43, +,+, 84032 Low_complexity Low_complexity 1563 chr1 128302486 128303311 CR1-D2 583 + 128302486 128303311 0 2 330,495, 0,330, +,+, 84057 LINE CR1 1563 chr1 128305894 128306378 CR1-F2 641 + 128305894 128306378 0 2 389,95, 0,389, +,+, 84058 LINE CR1 1564 chr1 128321603 128321973 CR1-C4 406 - 128321603 128321973 0 2 260,110, 0,260, -,-, 84072 LINE CR1 1564 chr1 128422465 128424039 CR1-X2 182 + 128422465 128424039 0 2 404,1000, 0,574, +,+, 84145 LINE CR1 1565 chr1 128462963 128463436 GGLTR5B 798 + 128462963 128463436 0 2 375,41, 0,432, +,+, 84170 LTR ERVL 1565 chr1 128465085 128465656 CR1-D 638 + 128465085 128465656 0 2 406,165, 0,406, +,+, 84172 LINE CR1 1565 chr1 128479624 128480361 CR1-L3B_Croc 381 - 128479624 128480361 0 2 155,88, 0,649, -,-, 84181 LINE CR1 1565 chr1 128573983 128574343 CR1-Y3 763 + 128573983 128574343 0 2 41,318, 0,42, +,+, 84232 LINE CR1 1567 chr1 128765089 128765893 CR1-Y2_Aves 464 + 128765089 128765893 0 2 84,340, 0,464, +,+, 84345 LINE CR1 1568 chr1 128930866 128931748 CR1-Y2_Aves 302 - 128930866 128931748 0 2 249,605, 0,277, -,-, 84448 LINE CR1 1568 chr1 128950708 128950893 GGLTR8A 487 - 128950708 128950893 0 2 51,134, 0,51, -,-, 84463 LTR ERVL 1568 chr1 128967627 128969078 CR1-F2 330 + 128967627 128969078 0 2 171,94, 0,1357, +,+, 84473 LINE CR1 1569 chr1 129057956 129058288 TguLTR5d 447 + 129057956 129058288 0 2 69,142, 0,190, +,+, 84532 LTR ERVL 1570 chr1 129113868 129114101 Char12Mar1_GG 708 - 129113868 129114101 0 2 95,138, 0,95, -,-, 84566 DNA hAT-Charlie 1570 chr1 129122698 129123807 CR1-D2 593 - 129122698 129123807 0 4 392,153,400,96, 0,460,613,1013, -,-,-,-, 84571 LINE CR1 1570 chr1 129154993 129155947 CR1-F2 598 + 129154993 129155947 0 2 544,410, 0,544, +,+, 84605 LINE CR1 1571 chr1 129333083 129333182 (TGTA)n 296 + 129333083 129333182 0 2 11,18, 0,81, +,+, 84735 Simple_repeat Simple_repeat 1571 chr1 129339627 129339966 CR1-D2 666 + 129339627 129339966 0 2 106,232, 0,107, +,+, 84740 LINE CR1 1572 chr1 129388264 129388505 GGLTR8A 553 + 129388264 129388505 0 2 88,153, 0,88, +,+, 84786 LTR ERVL 1572 chr1 129421509 129421860 GGLTR3A 634 + 129421509 129421860 0 2 278,73, 0,278, +,+, 84819 LTR ERVL 1572 chr1 129441442 129441938 CR1-Y2_Aves 314 - 129441442 129441938 0 2 257,239, 0,257, -,-, 84839 LINE CR1 1573 chr1 129517597 129517796 GGLTR5B 398 - 129517597 129517796 0 2 141,23, 0,176, -,-, 84900 LTR ERVL 1574 chr1 129643968 129644065 (TTTGTT)n 520 + 129643968 129644065 0 2 23,11, 0,86, +,+, 84997 Simple_repeat Simple_repeat 1574 chr1 129661641 129662131 GGLTR3F2 907 + 129661641 129662131 0 2 229,202, 0,288, +,+, 85020 LTR ERVL 1575 chr1 129809424 129812202 CR1-L3A_Croc 268 - 129809424 129812202 0 3 470,76,274, 0,1272,2504, -,-,-, 85156 LINE CR1 1577 chr1 130087312 130087825 GGLTR5A 328 - 130087312 130087825 0 2 122,347, 0,166, -,-, 85293 LTR ERVL 1577 chr1 130089203 130090000 CR1-Y2_Aves 410 - 130089203 130090000 0 3 517,97,139, 0,561,658, -,-,-, 85297 LINE CR1 1577 chr1 130117321 130117905 CR1-Y2_Aves 372 + 130117321 130117905 0 2 88,481, 0,103, +,+, 85319 LINE CR1 1578 chr1 130162830 130164529 CR1-X2 224 + 130162830 130164529 0 4 480,733,87,336, 0,498,1276,1363, +,+,+,+, 85343 LINE CR1 1578 chr1 130166979 130167538 CR1-Y2_Aves 233 - 130166979 130167538 0 2 44,256, 0,303, -,-, 85346 LINE CR1 1578 chr1 130253252 130254107 GGLTR5A 443 + 130253252 130254107 0 2 416,152, 0,703, +,+, 85383 LTR ERVL 1579 chr1 130298313 130298917 CR1-F2 576 + 130298313 130298917 0 2 260,337, 0,267, +,+, 85408 LINE CR1 1580 chr1 130477084 130477822 CR1-E 695 - 130477084 130477822 0 2 185,553, 0,185, -,-, 85514 LINE CR1 1580 chr1 130532443 130533131 CR1-L3B_Croc 294 + 130532443 130533131 0 2 294,78, 0,610, +,+, 85537 LINE CR1 1580 chr1 130545234 130546152 CR1-C4 703 - 130545234 130546152 0 2 148,147, 0,771, -,-, 85539 LINE CR1 1581 chr1 130554973 130555569 CR1-Y1_Aves 400 - 130554973 130555569 0 2 224,312, 0,284, -,-, 85545 LINE CR1 1581 chr1 130669403 130669473 A-rich 498 + 130669403 130669473 0 2 18,17, 0,53, +,+, 85600 Low_complexity Low_complexity 1581 chr1 130669713 130671426 CR1-F2 581 + 130669713 130671426 0 2 68,312, 0,1401, +,+, 85602 LINE CR1 1581 chr1 130671780 130672213 CR1-H2 861 + 130671780 130672213 0 2 381,52, 0,381, +,+, 85605 LINE CR1 197 chr1 130675483 130679757 ENS1-LTR 799 - 130675483 130679757 0 3 831,2610,831, 0,831,3443, -,-,-, 85607 LTR ERVL 1582 chr1 130708967 130709035 (ATGT)n 502 + 130708967 130709035 0 2 11,23, 0,45, +,+, 85618 Simple_repeat Simple_repeat 1583 chr1 130823345 130824481 CR1-Y4 427 + 130823345 130824481 0 3 441,370,103, 0,442,1033, +,+,+, 85684 LINE CR1 1583 chr1 130925510 130926180 CR1-C 832 + 130925510 130926180 0 2 284,386, 0,284, +,+, 85747 LINE CR1 1584 chr1 130945791 130947248 CR1-Y4 489 - 130945791 130947248 0 2 285,392, 0,1065, -,-, 85763 LINE CR1 1584 chr1 131021784 131023835 CR1-L3A_Croc 81 - 131021784 131023835 0 3 315,649,542, 0,540,1509, -,-,-, 85811 LINE CR1 1585 chr1 131078225 131078637 GGLTR5A 422 - 131078225 131078637 0 2 219,133, 0,279, -,-, 85847 LTR ERVL 1585 chr1 131117597 131118317 GGLTR11-int 458 + 131117597 131118317 0 3 115,105,233, 0,304,487, +,+,+, 85873 LTR ERV1 1585 chr1 131119091 131121760 CR1-Y2_Aves 173 - 131119091 131121760 0 3 832,409,398, 0,1256,2271, -,-,-, 85874 LINE CR1 1585 chr1 131154884 131155777 CR1-D2 671 + 131154884 131155777 0 2 61,832, 0,61, +,+, 85889 LINE CR1 1585 chr1 131181259 131182522 CR1-C4 569 - 131181259 131182522 0 2 856,407, 0,856, -,-, 85910 LINE CR1 1585 chr1 131198341 131199566 CR1-D2 596 - 131198341 131199566 0 2 701,524, 0,701, -,-, 85924 LINE CR1 1586 chr1 131237440 131241150 CR1-C4 452 - 131237440 131241150 0 4 498,1650,127,192, 0,1189,3391,3518, -,-,-,-, 85952 LINE CR1 1586 chr1 131243662 131244043 Char12Mar1_GG 488 - 131243662 131244043 0 2 81,297, 0,84, -,-, 85958 DNA hAT-Charlie 1586 chr1 131255751 131256634 CR1-C4 462 + 131255751 131256634 0 2 180,703, 0,180, +,+, 85967 LINE CR1 1586 chr1 131266401 131267128 CR1-Y2_Aves 251 + 131266401 131267128 0 2 587,133, 0,594, +,+, 85974 LINE CR1 1586 chr1 131277714 131278407 CR1-Y1_Aves 457 - 131277714 131278407 0 2 488,60, 0,633, -,-, 85981 LINE CR1 1587 chr1 131351142 131354669 CR1-F2 323 + 131351142 131354669 0 2 343,162, 0,3365, +,+, 86025 LINE CR1 1587 chr1 131369918 131371642 CR1-D2 685 + 131369918 131371642 0 3 173,493,531, 0,190,1193, +,+,+, 86037 LINE CR1 1587 chr1 131438221 131438817 GGLTR11-int 372 - 131438221 131438817 0 2 358,59, 0,537, -,-, 86088 LTR ERV1 1587 chr1 131455405 131456603 CR1-F2 549 + 131455405 131456603 0 2 81,744, 0,454, +,+, 86099 LINE CR1 1587 chr1 131464285 131465172 CR1-Y2_Aves 422 + 131464285 131465172 0 2 777,108, 0,779, +,+, 86105 LINE CR1 1588 chr1 131536696 131537162 CR1-C4 729 - 131536696 131537162 0 2 399,67, 0,399, -,-, 86145 LINE CR1 1588 chr1 131545487 131545735 CR1-D2 781 + 131545487 131545735 0 2 212,36, 0,212, +,+, 86152 LINE CR1 1588 chr1 131557584 131559600 CR1-L3B_Croc 224 + 131557584 131559600 0 2 210,117, 0,1899, +,+, 86162 LINE CR1 1588 chr1 131569298 131569830 CR1-F2 410 - 131569298 131569830 0 2 240,259, 0,273, -,-, 86171 LINE CR1 1588 chr1 131580042 131580342 CR1-C4 487 - 131580042 131580342 0 2 84,76, 0,224, -,-, 86176 LINE CR1 1588 chr1 131587936 131588347 Char12Mar1_GG 560 - 131587936 131588347 0 2 339,72, 0,339, -,-, 86186 DNA hAT-Charlie 1589 chr1 131596559 131597282 Char12Mar1_GG 738 - 131596559 131597282 0 2 70,475, 0,248, -,-, 86194 DNA hAT-Charlie 1589 chr1 131661223 131661951 (GGAGA)n 922 + 131661223 131661951 0 2 513,179, 0,549, +,+, 86233 Simple_repeat Simple_repeat 1590 chr1 131772635 131773475 CR1-Y1_Aves 493 + 131772635 131773475 0 2 378,409, 0,431, +,+, 86296 LINE CR1 1590 chr1 131843195 131846463 CR1-C 651 + 131843195 131846463 0 2 358,278, 0,2990, +,+, 86330 LINE CR1 1591 chr1 131880506 131880833 Charlie12_GG 464 - 131880506 131880833 0 2 157,61, 0,266, -,-, 86354 DNA hAT-Charlie 1592 chr1 132000931 132002742 CR1-C4 567 + 132000931 132002742 0 2 575,333, 0,1478, +,+, 86418 LINE CR1 1592 chr1 132004501 132005165 GGLTR8B 224 - 132004501 132005165 0 2 213,437, 0,227, -,-, 86421 LTR ERVL 1592 chr1 132044606 132044881 CR1-E 613 + 132044606 132044881 0 2 47,228, 0,47, +,+, 86449 LINE CR1 1592 chr1 132093438 132094184 CR1-F2 576 + 132093438 132094184 0 2 116,97, 0,649, +,+, 86482 LINE CR1 1593 chr1 132137119 132140665 CR1-F2 317 + 132137119 132140665 0 3 16,77,196, 0,204,3350, +,+,+, 86509 LINE CR1 1595 chr1 132446981 132447158 GGLTR8A 669 + 132446981 132447158 0 2 127,41, 0,136, +,+, 86661 LTR ERVL 1595 chr1 132508262 132508800 GGLTR8A 662 + 132508262 132508800 0 2 264,274, 0,264, +,+, 86686 LTR ERVL 1596 chr1 132575381 132581314 CR1-D2 500 + 132575381 132581314 0 2 330,114, 0,5819, +,+, 86737 LINE CR1 1596 chr1 132615430 132615511 GA-rich 312 + 132615430 132615511 0 2 15,33, 0,48, +,+, 86757 Low_complexity Low_complexity 1598 chr1 132792472 132794233 GGLTR8A 491 + 132792472 132794233 0 2 148,386, 0,1375, +,+, 86854 LTR ERVL 1598 chr1 132810751 132811839 CR1-L3B_Croc 285 - 132810751 132811839 0 2 93,488, 0,600, -,-, 86864 LINE CR1 1599 chr1 132948095 132949018 CR1-C4 548 - 132948095 132949018 0 2 253,575, 0,348, -,-, 86951 LINE CR1 1599 chr1 132976860 132979163 CR1-Y2_Aves 332 + 132976860 132979163 0 2 687,287, 0,2016, +,+, 86970 LINE CR1 1600 chr1 133047599 133047802 CR1-C4 572 - 133047599 133047802 0 2 15,159, 0,44, -,-, 87026 LINE CR1 1600 chr1 133141175 133150948 REP131 147 - 133141175 133150948 0 2 153,296, 0,9477, -,-, 87087 DNA? DNA? 1601 chr1 133240977 133241576 CR1-X 625 + 133240977 133241576 0 2 48,81, 0,518, +,+, 87148 LINE CR1 1601 chr1 133248924 133249710 CR1-D2 537 + 133248924 133249710 0 2 451,335, 0,451, +,+, 87155 LINE CR1 200 chr1 133299506 133300335 CR1-X2 689 + 133299506 133300335 0 3 337,59,433, 0,337,396, +,+,+, 87198 LINE CR1 1602 chr1 133363940 133364694 CR1-Y1_Aves 149 - 133363940 133364694 0 2 497,253, 0,501, -,-, 87240 LINE CR1 1603 chr1 133461006 133462088 CR1-X1 727 - 133461006 133462088 0 2 54,103, 0,979, -,-, 87292 LINE CR1 1604 chr1 133585957 133587186 CR1-C3 658 - 133585957 133587186 0 2 1001,227, 0,1002, -,-, 87367 LINE CR1 1604 chr1 133596943 133597461 CR1-E 324 + 133596943 133597461 0 2 80,369, 0,149, +,+, 87372 LINE CR1 1604 chr1 133619431 133619705 Char12Mar1_GG 652 - 133619431 133619705 0 2 83,191, 0,83, -,-, 87390 DNA hAT-Charlie 1605 chr1 133709613 133709667 (CTTTCCC)n 402 + 133709613 133709667 0 2 21,6, 0,48, +,+, 87444 Simple_repeat Simple_repeat 1606 chr1 133865110 133865602 CR1-X2 136 + 133865110 133865602 0 2 34,429, 0,63, +,+, 87519 LINE CR1 1606 chr1 133868946 133870042 CR1-F2 512 - 133868946 133870042 0 2 98,323, 0,773, -,-, 87523 LINE CR1 1606 chr1 133869044 133869710 GGLTR3C2 675 + 133869044 133869710 0 2 335,244, 0,422, +,+, 87524 LTR ERVL 1606 chr1 133876566 133877418 CR1-E 506 + 133876566 133877418 0 2 259,422, 0,430, +,+, 87532 LINE CR1 1606 chr1 133925040 133926773 GGERVL18-int 284 + 133925040 133926773 0 2 924,809, 0,924, +,+, 87565 LTR ERVL 1606 chr1 133935926 133936030 CR1-E 499 - 133935926 133936030 0 2 41,60, 0,44, -,-, 87572 LINE CR1 1606 chr1 133944353 133945203 GGLTR5B 497 - 133944353 133945203 0 3 127,66,47, 0,275,803, -,-,-, 87579 LTR ERVL 1607 chr1 134009686 134010236 CR1-Y1_Aves 468 + 134009686 134010236 0 2 438,112, 0,438, +,+, 87631 LINE CR1 1607 chr1 134072043 134074201 CR1-X2 743 + 134072043 134074201 0 2 117,142, 0,2016, +,+, 87680 LINE CR1 1608 chr1 134138794 134139807 CR1-Y2_Aves 169 - 134138794 134139807 0 3 201,431,239, 0,231,774, -,-,-, 87716 LINE CR1 1608 chr1 134159617 134160820 CR1-D 635 - 134159617 134160820 0 2 1161,42, 0,1161, -,-, 87725 LINE CR1 1608 chr1 134164660 134165624 GGLTR8A 513 - 134164660 134165624 0 2 130,819, 0,145, -,-, 87729 LTR ERVL 1608 chr1 134214808 134215195 CR1-C2 585 + 134214808 134215195 0 2 143,244, 0,143, +,+, 87760 LINE CR1 1609 chr1 134219653 134220563 CR1-F2 412 + 134219653 134220563 0 2 679,231, 0,679, +,+, 87765 LINE CR1 1609 chr1 134331853 134335978 CR1-Y4 474 - 134331853 134335978 0 2 412,451, 0,3674, -,-, 87839 LINE CR1 1609 chr1 134332265 134335527 GGERVL-A-int 817 - 134332265 134335527 0 3 395,577,2290, 0,395,972, -,-,-, 87840 LTR ERVL 1610 chr1 134357115 134357160 (TCTTTT)n 588 + 134357115 134357160 0 2 9,11, 0,34, +,+, 87855 Simple_repeat Simple_repeat 1610 chr1 134365870 134365950 (GTAT)n 370 + 134365870 134365950 0 2 22,12, 0,68, +,+, 87866 Simple_repeat Simple_repeat 1610 chr1 134376862 134377189 GGLTR8A 560 - 134376862 134377189 0 2 129,198, 0,129, -,-, 87877 LTR ERVL 1611 chr1 134490260 134490856 TguLTR5e 410 - 134490260 134490856 0 2 123,291, 0,305, -,-, 87960 LTR ERVL 1611 chr1 134509761 134511080 CR1-Y 567 + 134509761 134511080 0 2 1259,60, 0,1259, +,+, 87987 LINE CR1 1611 chr1 134547158 134549876 CR1-Y1_Aves 454 - 134547158 134549876 0 2 350,215, 0,2503, -,-, 88019 LINE CR1 1611 chr1 134553425 134553545 CR1-C3 816 + 134553425 134553545 0 2 76,38, 0,82, +,+, 88023 LINE CR1 1611 chr1 134564789 134567284 CR1-F0 501 - 134564789 134567284 0 3 1025,162,411, 0,1922,2084, -,-,-, 88033 LINE CR1 1612 chr1 134630981 134631688 GGLTR8B 185 - 134630981 134631688 0 2 234,312, 0,395, -,-, 88095 LTR ERVL 1612 chr1 134692415 134692475 (TTTCCT)n 436 + 134692415 134692475 0 2 7,30, 0,30, +,+, 88154 Simple_repeat Simple_repeat 1612 chr1 134717789 134717835 (AACAAT)n 484 + 134717789 134717835 0 2 6,6, 0,40, +,+, 88181 Simple_repeat Simple_repeat 1612 chr1 134718587 134720305 CR1-F2 531 - 134718587 134720305 0 2 370,758, 0,960, -,-, 88183 LINE CR1 1613 chr1 134836061 134836836 GGLTR5A 387 + 134836061 134836836 0 2 397,220, 0,555, +,+, 88282 LTR ERVL 1613 chr1 134849879 134852262 CR1-L3B_Croc 402 - 134849879 134852262 0 2 480,95, 0,2288, -,-, 88294 LINE CR1 1615 chr1 135055172 135055259 GA-rich 232 + 135055172 135055259 0 2 20,14, 0,73, +,+, 88454 Low_complexity Low_complexity 1615 chr1 135107237 135107313 (TTTTCT)n 544 + 135107237 135107313 0 2 28,14, 0,62, +,+, 88491 Simple_repeat Simple_repeat 201 chr1 135134660 135135287 CR1-D2 727 - 135134660 135135287 0 2 200,286, 0,341, -,-, 88511 LINE CR1 1616 chr1 135177047 135179526 CR1-F2 643 + 135177047 135179526 0 2 68,267, 0,2212, +,+, 88538 LINE CR1 1616 chr1 135206849 135207455 CR1-Y2_Aves 332 - 135206849 135207455 0 2 298,253, 0,353, -,-, 88557 LINE CR1 1617 chr1 135302191 135303098 CR1-L3B_Croc 253 - 135302191 135303098 0 2 441,103, 0,804, -,-, 88612 LINE CR1 1617 chr1 135348624 135349143 CR1-F2 694 + 135348624 135349143 0 2 180,339, 0,180, +,+, 88636 LINE CR1 1617 chr1 135365771 135366516 CR1-C4 546 + 135365771 135366516 0 2 420,164, 0,581, +,+, 88651 LINE CR1 1618 chr1 135423501 135424738 CR1-L3B_Croc 169 - 135423501 135424738 0 2 522,249, 0,988, -,-, 88686 LINE CR1 1618 chr1 135471014 135471432 CR1-F2 689 + 135471014 135471432 0 2 308,110, 0,308, +,+, 88711 LINE CR1 1618 chr1 135505142 135506123 CR1-F2 514 - 135505142 135506123 0 2 381,23, 0,958, -,-, 88748 LINE CR1 1619 chr1 135641054 135641119 GA-rich 530 + 135641054 135641119 0 2 16,13, 0,52, +,+, 88819 Low_complexity Low_complexity 1619 chr1 135651271 135652092 Char12Mar1_GG 756 - 135651271 135652092 0 2 160,396, 0,425, -,-, 88827 DNA hAT-Charlie 1620 chr1 135667019 135667382 CR1-C4 611 - 135667019 135667382 0 2 66,201, 0,162, -,-, 88836 LINE CR1 1620 chr1 135675297 135675675 CR1-Y4 767 + 135675297 135675675 0 2 176,202, 0,176, +,+, 88843 LINE CR1 1620 chr1 135727069 135727664 GGLTR5A 525 + 135727069 135727664 0 2 284,67, 0,528, +,+, 88871 LTR ERVL 1621 chr1 135795315 135795711 UCON2 289 - 135795315 135795711 0 2 81,102, 0,294, -,-, 88919 DNA? DNA? 1621 chr1 135867605 135868112 CR1-L3A_Croc 197 + 135867605 135868112 0 2 267,123, 0,384, +,+, 88958 LINE CR1 1621 chr1 135874095 135875015 CR1-Y4 650 + 135874095 135875015 0 2 530,162, 0,758, +,+, 88963 LINE CR1 1621 chr1 135883800 135886350 CR1-F2 454 - 135883800 135886350 0 2 329,747, 0,1803, -,-, 88973 LINE CR1 1621 chr1 135884123 135885605 CR1-C 677 + 135884123 135885605 0 2 123,812, 0,670, +,+, 88974 LINE CR1 1622 chr1 135937425 135937719 CR1-C2 841 + 135937425 135937719 0 2 155,139, 0,155, +,+, 89021 LINE CR1 1622 chr1 135950935 135951542 CR1-Y2_Aves 178 - 135950935 135951542 0 2 359,230, 0,377, -,-, 89035 LINE CR1 1622 chr1 135993355 135994261 CR1-Y1_Aves 456 - 135993355 135994261 0 2 262,517, 0,389, -,-, 89060 LINE CR1 1622 chr1 136018669 136021037 CR1-G 845 + 136018669 136021037 0 2 1762,606, 0,1762, +,+, 89075 LINE CR1 1622 chr1 136038539 136039213 CR1-E 656 + 136038539 136039213 0 2 598,76, 0,598, +,+, 89084 LINE CR1 1622 chr1 136044515 136045009 CR1-D2 728 - 136044515 136045009 0 2 310,184, 0,310, -,-, 89086 LINE CR1 1623 chr1 136054439 136062684 Mariner1b_GG 700 - 136054439 136062684 0 2 215,308, 0,7937, -,-, 89091 DNA TcMar-Mariner 1623 chr1 136119194 136119920 GGLTR5B 519 - 136119194 136119920 0 2 61,490, 0,236, -,-, 89138 LTR ERVL 1623 chr1 136126945 136127988 CR1-C3 729 - 136126945 136127988 0 2 389,615, 0,428, -,-, 89144 LINE CR1 1623 chr1 136143484 136144333 CR1-Y2_Aves 330 + 136143484 136144333 0 2 617,228, 0,621, +,+, 89157 LINE CR1 1623 chr1 136180034 136181330 CR1-F2 504 - 136180034 136181330 0 2 771,525, 0,771, -,-, 89177 LINE CR1 1624 chr1 136251376 136253533 CR1-E 441 + 136251376 136253533 0 3 279,238,932, 0,288,1225, +,+,+, 89225 LINE CR1 1625 chr1 136354387 136354801 CR1-X1 680 + 136354387 136354801 0 2 234,180, 0,234, +,+, 89283 LINE CR1 1625 chr1 136402217 136407994 GGERV10_LTR 565 - 136402217 136407994 0 8 159,61,462,183,1689,1755,130,61, 0,264,325,1383,2069,3761,5525,5716, -,-,-,-,-,-,-,-, 89300 LTR ERVL 1626 chr1 136570003 136570080 G-rich 360 + 136570003 136570080 0 2 31,17, 0,60, +,+, 89396 Low_complexity Low_complexity 1627 chr1 136661667 136662839 CR1-L3B_Croc 216 + 136661667 136662839 0 2 642,236, 0,936, +,+, 89443 LINE CR1 1628 chr1 136756154 136757212 CR1-C4 650 - 136756154 136757212 0 2 50,417, 0,641, -,-, 89473 LINE CR1 1628 chr1 136798312 136798411 A-rich 633 + 136798312 136798411 0 2 37,33, 0,66, +,+, 89490 Low_complexity Low_complexity 203 chr1 136838975 136840178 Mariner1_GG 643 - 136838975 136840178 0 2 333,856, 0,347, -,-, 89511 DNA TcMar-Mariner 1629 chr1 136872234 136873363 Mariner1_GG 663 - 136872234 136873363 0 2 459,643, 0,486, -,-, 89529 DNA TcMar-Mariner 1629 chr1 136961638 136962897 CR1-Y1_Aves 483 + 136961638 136962897 0 2 59,172, 0,1087, +,+, 89586 LINE CR1 1630 chr1 136979821 136980845 CR1-E 745 - 136979821 136980845 0 2 398,626, 0,398, -,-, 89593 LINE CR1 1630 chr1 136982610 136983382 CR1-H2 496 - 136982610 136983382 0 2 303,469, 0,303, -,-, 89597 LINE CR1 1630 chr1 136988430 136988833 CR1-Y4 662 - 136988430 136988833 0 2 129,274, 0,129, -,-, 89604 LINE CR1 1631 chr1 137111346 137113269 CR1-F 622 + 137111346 137113269 0 2 281,1642, 0,281, +,+, 89667 LINE CR1 1632 chr1 137350594 137351147 CR1-C4 617 + 137350594 137351147 0 2 502,51, 0,502, +,+, 89801 LINE CR1 1633 chr1 137383693 137383823 (CGG)n 344 + 137383693 137383823 0 2 8,43, 0,87, +,+, 89814 Simple_repeat Simple_repeat 1633 chr1 137478002 137478680 CR1-B2 772 + 137478002 137478680 0 2 517,161, 0,517, +,+, 89868 LINE CR1 1634 chr1 137514559 137515068 CR1-X1 575 + 137514559 137515068 0 2 336,171, 0,338, +,+, 89883 LINE CR1 1636 chr1 137777158 137778318 CR1-Y2_Aves 229 + 137777158 137778318 0 3 380,516,199, 0,408,961, +,+,+, 90010 LINE CR1 1636 chr1 137793608 137794091 CR1-F2 479 - 137793608 137794091 0 2 398,85, 0,398, -,-, 90018 LINE CR1 1636 chr1 137834151 137834734 CR1-E 828 - 137834151 137834734 0 2 493,90, 0,493, -,-, 90046 LINE CR1 1636 chr1 137876222 137876281 (CATATA)n 424 + 137876222 137876281 0 2 6,10, 0,49, +,+, 90059 Simple_repeat Simple_repeat 1637 chr1 137917831 137918800 CR1-C4 503 - 137917831 137918800 0 2 74,894, 0,75, -,-, 90085 LINE CR1 1637 chr1 137923844 137927416 CR1-H 731 - 137923844 137927416 0 2 2061,982, 0,2590, -,-, 90092 LINE CR1 1637 chr1 137940168 137942430 CR1-Y2_Aves 234 + 137940168 137942430 0 2 826,953, 0,1309, +,+, 90103 LINE CR1 1637 chr1 137947045 137947133 (TAATTA)n 340 + 137947045 137947133 0 2 19,13, 0,75, +,+, 90108 Simple_repeat Simple_repeat 1637 chr1 137970431 137970885 Char12Mar1_GG 625 - 137970431 137970885 0 2 20,35, 0,419, -,-, 90116 DNA hAT-Charlie 1638 chr1 138040222 138040674 GGLTR8B 302 + 138040222 138040674 0 2 100,200, 0,252, +,+, 90165 LTR ERVL 1638 chr1 138087661 138089003 CR1-Y4 505 + 138087661 138089003 0 3 181,306,416, 0,181,926, +,+,+, 90196 LINE CR1 1638 chr1 138117169 138117973 GGLTR8A 594 - 138117169 138117973 0 2 722,82, 0,722, -,-, 90214 LTR ERVL 1639 chr1 138152956 138153201 GGLTR8B 757 + 138152956 138153201 0 3 92,70,41, 0,134,204, +,+,+, 90226 LTR ERVL 1639 chr1 138163683 138164917 GGLTR5B 540 + 138163683 138164917 0 2 235,310, 0,924, +,+, 90236 LTR ERVL 1639 chr1 138200922 138201891 CR1-Y1_Aves 550 - 138200922 138201891 0 2 220,51, 0,918, -,-, 90265 LINE CR1 1639 chr1 138215911 138217305 CR1-C4 606 - 138215911 138217305 0 2 373,995, 0,399, -,-, 90283 LINE CR1 1639 chr1 138218791 138219817 CR1-D 436 - 138218791 138219817 0 2 391,370, 0,656, -,-, 90287 LINE CR1 1640 chr1 138291591 138293789 CR1-H 784 + 138291591 138293789 0 2 1149,747, 0,1451, +,+, 90328 LINE CR1 1640 chr1 138307894 138310826 GGLTR3F1 896 - 138307894 138310826 0 2 491,2441, 0,491, -,-, 90339 LTR ERVL 1640 chr1 138385727 138388106 CR1-E 704 + 138385727 138388106 0 2 723,1656, 0,723, +,+, 90395 LINE CR1 1641 chr1 138434506 138435439 CR1-Y2_Aves 282 - 138434506 138435439 0 2 753,180, 0,753, -,-, 90425 LINE CR1 1641 chr1 138478046 138479341 CR1-Y1_Aves 483 - 138478046 138479341 0 2 417,523, 0,772, -,-, 90450 LINE CR1 1643 chr1 138771454 138771943 GGLTR5B 795 - 138771454 138771943 0 2 78,122, 0,367, -,-, 90639 LTR ERVL 1644 chr1 138887049 138888423 Mariner1_GG 622 - 138887049 138888423 0 2 63,1281, 0,93, -,-, 90697 DNA TcMar-Mariner 1644 chr1 138908454 138909207 Char12Mar1_GG 408 - 138908454 138909207 0 2 625,103, 0,650, -,-, 90706 DNA hAT-Charlie 1645 chr1 138969471 138970229 CR1-B2 807 + 138969471 138970229 0 2 532,226, 0,532, +,+, 90738 LINE CR1 1645 chr1 138979689 138981198 CR1-X2 624 - 138979689 138981198 0 3 877,180,98, 0,1200,1411, -,-,-, 90742 LINE CR1 1645 chr1 139051562 139052000 CR1-H 793 - 139051562 139052000 0 2 262,176, 0,262, -,-, 90774 LINE CR1 1646 chr1 139103019 139104854 CR1-Y3 578 + 139103019 139104854 0 2 497,1338, 0,497, +,+, 90809 LINE CR1 1646 chr1 139142001 139143042 CR1-C4 632 - 139142001 139143042 0 2 43,447, 0,594, -,-, 90831 LINE CR1 1647 chr1 139201358 139201767 CR1-C2 679 - 139201358 139201767 0 2 145,264, 0,145, -,-, 90870 LINE CR1 1647 chr1 139236179 139236818 CR1-Y2_Aves 358 + 139236179 139236818 0 2 251,388, 0,251, +,+, 90903 LINE CR1 1648 chr1 139416857 139417593 GGLTR8B 356 - 139416857 139417593 0 3 131,71,369, 0,143,367, -,-,-, 91004 LTR ERVL 1649 chr1 139483984 139486017 CR1-F2 564 - 139483984 139486017 0 3 391,812,94, 0,1127,1939, -,-,-, 91051 LINE CR1 1649 chr1 139503843 139508162 CR1-D2 497 - 139503843 139508162 0 2 1128,204, 0,4115, -,-, 91061 LINE CR1 1651 chr1 139732018 139732189 A-rich 495 + 139732018 139732189 0 2 34,49, 0,122, +,+, 91198 Low_complexity Low_complexity 1651 chr1 139780413 139780722 CR1-Y1_Aves 414 + 139780413 139780722 0 2 132,148, 0,161, +,+, 91231 LINE CR1 1651 chr1 139815402 139815498 (T)n 846 + 139815402 139815498 0 2 33,45, 0,51, +,+, 91269 Simple_repeat Simple_repeat 1651 chr1 139819984 139820040 (CTT)n 360 + 139819984 139820040 0 2 6,22, 0,34, +,+, 91287 Simple_repeat Simple_repeat 206 chr1 139852973 139854198 CR1-Y1_Aves 395 + 139852973 139854198 0 2 391,833, 0,392, +,+, 91317 LINE CR1 1652 chr1 139913826 139914151 ENS1-LTR 536 - 139913826 139914151 0 2 119,163, 0,162, -,-, 91364 LTR ERVL 1652 chr1 139959694 139960263 GGERVL-C-int 264 + 139959694 139960263 0 2 166,403, 0,166, +,+, 91396 LTR ERVL 1652 chr1 139965165 139966094 CR1-C 576 - 139965165 139966094 0 2 831,31, 0,898, -,-, 91398 LINE CR1 1652 chr1 139973578 139974148 GGERVL-C-int 272 + 139973578 139974148 0 2 167,403, 0,167, +,+, 91406 LTR ERVL 1653 chr1 139985776 139986439 CR1-C 476 + 139985776 139986439 0 2 193,438, 0,225, +,+, 91414 LINE CR1 1653 chr1 139989159 139989808 CR1-C 502 + 139989159 139989808 0 2 193,430, 0,219, +,+, 91418 LINE CR1 1653 chr1 139992533 139993182 CR1-C 502 + 139992533 139993182 0 2 193,430, 0,219, +,+, 91422 LINE CR1 1653 chr1 139995903 139996551 CR1-C 504 + 139995903 139996551 0 2 193,429, 0,219, +,+, 91426 LINE CR1 1653 chr1 139999273 139999921 CR1-C 504 + 139999273 139999921 0 2 193,429, 0,219, +,+, 91430 LINE CR1 1653 chr1 140002652 140003300 CR1-C 504 + 140002652 140003300 0 2 193,429, 0,219, +,+, 91434 LINE CR1 1653 chr1 140006023 140006678 CR1-C 502 + 140006023 140006678 0 2 193,430, 0,225, +,+, 91438 LINE CR1 1653 chr1 140018753 140024917 GGLTR7-int 428 - 140018753 140024917 0 5 175,251,167,2765,401, 0,431,1792,1959,5763, -,-,-,-,-, 91447 LTR ERV1 1653 chr1 140060410 140061049 CR1-G 325 + 140060410 140061049 0 2 563,66, 0,573, +,+, 91471 LINE CR1 1654 chr1 140132921 140133165 Charlie12_GG 544 - 140132921 140133165 0 2 90,128, 0,116, -,-, 91513 DNA hAT-Charlie 1654 chr1 140133615 140134806 CR1-X 320 - 140133615 140134806 0 2 404,503, 0,688, -,-, 91515 LINE CR1 1654 chr1 140163130 140163206 (AACA)n 392 + 140163130 140163206 0 2 12,10, 0,66, +,+, 91541 Simple_repeat Simple_repeat 1655 chr1 140262260 140262778 ENS1B-LTR 413 - 140262260 140262778 0 2 336,136, 0,382, -,-, 91595 LTR ERVL 1655 chr1 140277848 140278909 CR1-E 337 - 140277848 140278909 0 2 345,133, 0,928, -,-, 91615 LINE CR1 1655 chr1 140299487 140300539 Char12Mar1_GG 614 - 140299487 140300539 0 2 428,133, 0,919, -,-, 91632 DNA hAT-Charlie 1655 chr1 140299915 140300406 GGLTR3F1 855 + 140299915 140300406 0 2 231,207, 0,284, +,+, 91633 LTR ERVL 1655 chr1 140367165 140367256 (AAAAGAA)n 712 + 140367165 140367256 0 2 13,34, 0,57, +,+, 91692 Simple_repeat Simple_repeat 1656 chr1 140421369 140421420 (CTTT)n 492 + 140421369 140421420 0 2 15,14, 0,37, +,+, 91729 Simple_repeat Simple_repeat 1656 chr1 140466418 140467121 CR1-F2 623 + 140466418 140467121 0 2 413,283, 0,420, +,+, 91761 LINE CR1 1657 chr1 140512444 140512570 (ACAA)n 536 + 140512444 140512570 0 2 50,13, 0,113, +,+, 91792 Simple_repeat Simple_repeat 1657 chr1 140560001 140560088 (T)n 784 + 140560001 140560088 0 2 32,29, 0,58, +,+, 91830 Simple_repeat Simple_repeat 1657 chr1 140574766 140577213 CR1-C 833 - 140574766 140577213 0 3 923,207,214, 0,963,2233, -,-,-, 91844 LINE CR1 1657 chr1 140594260 140595969 CR1-X2 255 - 140594260 140595969 0 2 813,646, 0,1063, -,-, 91867 LINE CR1 1657 chr1 140608980 140609846 CR1-C4 517 + 140608980 140609846 0 2 332,534, 0,332, +,+, 91878 LINE CR1 1657 chr1 140631112 140636941 GGERV10_LTR 984 + 140631112 140636941 0 3 223,5385,220, 0,224,5609, +,+,+, 91898 LTR ERVL 1658 chr1 140657021 140658733 CR1-D2 455 - 140657021 140658733 0 2 615,1097, 0,615, -,-, 91921 LINE CR1 1658 chr1 140673513 140673877 TguLTR5e 351 + 140673513 140673877 0 2 207,104, 0,260, +,+, 91942 LTR ERVL 1658 chr1 140676060 140677040 CR1-11_Crp 139 + 140676060 140677040 0 2 48,277, 0,703, +,+, 91948 LINE CR1 1659 chr1 140786609 140787273 CR1-F2 608 + 140786609 140787273 0 2 228,436, 0,228, +,+, 92063 LINE CR1 1659 chr1 140789371 140790253 CR1-D 487 + 140789371 140790253 0 2 826,45, 0,837, +,+, 92064 LINE CR1 1659 chr1 140801809 140802594 CR1-Y4 620 - 140801809 140802594 0 2 626,159, 0,626, -,-, 92079 LINE CR1 1659 chr1 140811066 140811696 CR1-E 694 - 140811066 140811696 0 2 59,571, 0,59, -,-, 92085 LINE CR1 1659 chr1 140818527 140818833 CR1-H 779 + 140818527 140818833 0 2 201,105, 0,201, +,+, 92094 LINE CR1 1659 chr1 140843213 140844373 CR1-C4 585 + 140843213 140844373 0 2 183,308, 0,852, +,+, 92118 LINE CR1 1659 chr1 140855008 140856257 CR1-D2 526 + 140855008 140856257 0 2 353,896, 0,353, +,+, 92131 LINE CR1 1660 chr1 140914693 140914807 (A)n 964 + 140914693 140914807 0 2 29,29, 0,85, +,+, 92175 Simple_repeat Simple_repeat 1660 chr1 141010675 141013416 CR1-B 918 - 141010675 141013416 0 2 423,1070, 0,1671, -,-, 92233 LINE CR1 1661 chr1 141128930 141129681 CR1-C4 537 - 141128930 141129681 0 2 267,484, 0,267, -,-, 92319 LINE CR1 1661 chr1 141151431 141151773 CR1-Y4 316 - 141151431 141151773 0 2 228,114, 0,228, -,-, 92333 LINE CR1 1662 chr1 141192196 141194310 CR1-D 383 + 141192196 141194310 0 2 507,1605, 0,509, +,+, 92363 LINE CR1 1662 chr1 141201990 141202814 CR1-Y4 592 + 141201990 141202814 0 2 649,175, 0,649, +,+, 92371 LINE CR1 1662 chr1 141212255 141212538 GGLTR5B 370 + 141212255 141212538 0 2 66,142, 0,141, +,+, 92381 LTR ERVL 1662 chr1 141218124 141218280 (TATATG)n 581 + 141218124 141218280 0 2 43,96, 0,60, +,+, 92389 Simple_repeat Simple_repeat 1662 chr1 141238204 141241183 CR1-F2 840 - 141238204 141241183 0 2 2009,970, 0,2009, -,-, 92403 LINE CR1 1663 chr1 141336003 141336677 GGLTR10C-int 719 + 141336003 141336677 0 2 359,315, 0,359, +,+, 92470 LTR ERVK 1663 chr1 141343611 141346137 CR1-Y4 532 + 141343611 141346137 0 2 1354,217, 0,2309, +,+, 92485 LINE CR1 1663 chr1 141372046 141372798 CR1-C4 644 - 141372046 141372798 0 2 249,503, 0,249, -,-, 92515 LINE CR1 1663 chr1 141391539 141392377 GGLTR5B 357 + 141391539 141392377 0 2 110,471, 0,367, +,+, 92539 LTR ERVL 1663 chr1 141392824 141393078 (GGGAA)n 789 + 141392824 141393078 0 2 174,80, 0,174, +,+, 92542 Simple_repeat Simple_repeat 1663 chr1 141398861 141402216 CR1-F 601 + 141398861 141402216 0 2 1333,1471, 0,1884, +,+, 92549 LINE CR1 1664 chr1 141441764 141445909 GGLTR10A 975 - 141441764 141445909 0 3 313,3515,313, 0,315,3832, -,-,-, 92595 LTR ERVK 1664 chr1 141451295 141453263 CR1-D2 641 + 141451295 141453263 0 2 226,209, 0,1759, +,+, 92606 LINE CR1 1664 chr1 141451517 141453057 CR1-E 537 + 141451517 141453057 0 2 339,880, 0,660, +,+, 92607 LINE CR1 1664 chr1 141453474 141455290 GGERVK1-int 969 + 141453474 141455290 0 3 241,206,1369, 0,241,447, +,+,+, 92610 LTR ERVK 1664 chr1 141460910 141464016 CR1-G 830 + 141460910 141464016 0 2 1899,1207, 0,1899, +,+, 92618 LINE CR1 1664 chr1 141478919 141481843 Charlie12_GG 520 - 141478919 141481843 0 4 295,936,328,131, 0,1503,2439,2793, -,-,-,-, 92637 DNA hAT-Charlie 1664 chr1 141479210 141480428 CR1-H 767 - 141479210 141480428 0 2 143,741, 0,477, -,-, 92638 LINE CR1 1664 chr1 141479353 141479684 GGLTR3E2 553 - 141479353 141479684 0 2 229,102, 0,229, -,-, 92639 LTR ERVL 1664 chr1 141481973 141488302 GGERVK1-int 922 + 141481973 141488302 0 4 240,5312,539,238, 0,240,5552,6091, +,+,+,+, 92640 LTR ERVK 1664 chr1 141490555 141491083 GGLTR3F1 910 - 141490555 141491083 0 2 492,36, 0,492, -,-, 92643 LTR ERVL 1664 chr1 141491083 141496890 GGLTR3F1 873 - 141491083 141496890 0 2 5314,492, 0,5315, -,-, 92644 LTR ERVL 1664 chr1 141503253 141504328 GGLTR8B 452 - 141503253 141504328 0 2 435,168, 0,907, -,-, 92656 LTR ERVL 1664 chr1 141507886 141510194 CR1-F2 328 + 141507886 141510194 0 3 1340,89,823, 0,1392,1485, +,+,+, 92667 LINE CR1 1664 chr1 141510922 141511002 (TAATAT)n 402 + 141510922 141511002 0 2 49,9, 0,71, +,+, 92669 Simple_repeat Simple_repeat 1664 chr1 141520746 141521735 GGLTR5A 447 + 141520746 141521735 0 2 209,126, 0,863, +,+, 92683 LTR ERVL 1664 chr1 141527805 141528341 GGLTR5B 224 - 141527805 141528341 0 2 126,369, 0,167, -,-, 92689 LTR ERVL 1664 chr1 141545753 141547659 CR1-D2 546 - 141545753 141547659 0 2 799,1107, 0,799, -,-, 92709 LINE CR1 1664 chr1 141553989 141557719 CR1-F 420 + 141553989 141557719 0 3 510,563,1735, 0,512,1995, +,+,+, 92718 LINE CR1 1665 chr1 141563609 141564602 CR1-E 627 + 141563609 141564602 0 2 317,187, 0,806, +,+, 92725 LINE CR1 1665 chr1 141563930 141564095 GGLTR12C 702 + 141563930 141564095 0 2 49,115, 0,50, +,+, 92726 LTR ERVL 1665 chr1 141565495 141570222 CR1-D2 424 + 141565495 141570222 0 3 2750,551,842, 0,3334,3885, +,+,+, 92729 LINE CR1 1665 chr1 141584005 141584444 CR1-Y1_Aves 236 + 141584005 141584444 0 2 162,266, 0,173, +,+, 92745 LINE CR1 1665 chr1 141616317 141619636 CR1-C3 324 - 141616317 141619636 0 2 275,3044, 0,275, -,-, 92786 LINE CR1 1665 chr1 141666050 141668659 CR1-G 863 + 141666050 141668659 0 2 1958,642, 0,1967, +,+, 92843 LINE CR1 1665 chr1 141669142 141675325 GGERVK1-int 980 + 141669142 141675325 0 4 241,5262,439,241, 0,241,5503,5942, +,+,+,+, 92844 LTR ERVK 1665 chr1 141683327 141684210 Char12Mar1_GG 462 + 141683327 141684210 0 2 424,421, 0,462, +,+, 92852 DNA hAT-Charlie 1666 chr1 141697565 141697663 (AACA)n 338 + 141697565 141697663 0 2 50,29, 0,69, +,+, 92875 Simple_repeat Simple_repeat 1666 chr1 141702108 141703168 CR1-X 512 - 141702108 141703168 0 2 435,523, 0,537, -,-, 92881 LINE CR1 1666 chr1 141727675 141729238 CR1-F2 279 - 141727675 141729238 0 2 598,729, 0,834, -,-, 92912 LINE CR1 1666 chr1 141729262 141731025 ENS3-int 370 - 141729262 141731025 0 3 896,278,334, 0,896,1429, -,-,-, 92914 LTR ERVL 1666 chr1 141741266 141742986 Char12Mar1_GG 601 - 141741266 141742986 0 3 54,47,445, 0,1193,1275, -,-,-, 92925 DNA hAT-Charlie 1666 chr1 141741320 141742459 GGLTR3C2 597 + 141741320 141742459 0 2 118,445, 0,694, +,+, 92926 LTR ERVL 1666 chr1 141750411 141751264 CR1-C4 496 + 141750411 141751264 0 2 389,464, 0,389, +,+, 92937 LINE CR1 1666 chr1 141755899 141756535 Charlie12_GG 534 + 141755899 141756535 0 2 287,322, 0,314, +,+, 92944 DNA hAT-Charlie 1666 chr1 141795033 141798464 CR1-F0 844 + 141795033 141798464 0 2 2015,891, 0,2540, +,+, 92988 LINE CR1 1666 chr1 141806264 141806929 GGLTR5A 276 + 141806264 141806929 0 2 458,136, 0,529, +,+, 93000 LTR ERVL 1666 chr1 141809070 141811009 CR1-G 325 + 141809070 141811009 0 2 603,878, 0,1061, +,+, 93006 LINE CR1 1666 chr1 141813513 141813900 GGLTR3C1 534 + 141813513 141813900 0 2 271,85, 0,302, +,+, 93011 LTR ERVL 1666 chr1 141813902 141815346 CR1-E 593 + 141813902 141815346 0 2 472,808, 0,636, +,+, 93013 LINE CR1 1667 chr1 141826636 141828356 CR1-C 823 + 141826636 141828356 0 3 936,69,226, 0,1425,1494, +,+,+, 93031 LINE CR1 1667 chr1 141835586 141837584 CR1-H 688 - 141835586 141837584 0 2 691,746, 0,1252, -,-, 93046 LINE CR1 1667 chr1 141845227 141847489 CR1-D2 450 - 141845227 141847489 0 2 657,1261, 0,1001, -,-, 93051 LINE CR1 1667 chr1 141866563 141866672 A-rich 617 + 141866563 141866672 0 2 36,39, 0,70, +,+, 93078 Low_complexity Low_complexity 1667 chr1 141879348 141880263 GGLTR8A 28 - 141879348 141880263 0 2 327,288, 0,627, -,-, 93098 LTR ERVL 1667 chr1 141880549 141880638 (A)n 904 + 141880549 141880638 0 2 23,17, 0,72, +,+, 93100 Simple_repeat Simple_repeat 1667 chr1 141886446 141887909 CR1-C4 412 + 141886446 141887909 0 2 356,1098, 0,365, +,+, 93106 LINE CR1 1667 chr1 141903565 141905207 CR1-C4 423 + 141903565 141905207 0 2 68,422, 0,1220, +,+, 93128 LINE CR1 1667 chr1 141905219 141905810 GGLTR3A 862 + 141905219 141905810 0 2 528,63, 0,528, +,+, 93131 LTR ERVL 1667 chr1 141907425 141908941 CR1-C4 564 - 141907425 141908941 0 2 474,1042, 0,474, -,-, 93137 LINE CR1 1667 chr1 141910490 141910555 GA-rich 298 + 141910490 141910555 0 2 11,12, 0,53, +,+, 93140 Low_complexity Low_complexity 1667 chr1 141913341 141913783 GGLTR3C1 252 + 141913341 141913783 0 2 308,102, 0,340, +,+, 93146 LTR ERVL 1667 chr1 141918457 141919137 GGLTR3E3 679 + 141918457 141919137 0 2 230,427, 0,253, +,+, 93156 LTR ERVL 1667 chr1 141924121 141924722 CR1-C 766 - 141924121 141924722 0 2 474,127, 0,474, -,-, 93160 LINE CR1 208 chr1 141950716 141951234 GGLTR5A 345 + 141950716 141951234 0 2 353,150, 0,368, +,+, 93192 LTR ERVL 1668 chr1 141953886 141954252 GGLTR8B 470 + 141953886 141954252 0 2 96,113, 0,253, +,+, 93197 LTR ERVL 1668 chr1 141960397 141961012 GGLTR8A 399 - 141960397 141961012 0 2 384,230, 0,385, -,-, 93201 LTR ERVL 1668 chr1 141965517 141966387 CR1-F 290 + 141965517 141966387 0 2 457,377, 0,493, +,+, 93210 LINE CR1 1668 chr1 141972478 141974105 TguLTR5d 328 - 141972478 141974105 0 2 92,337, 0,1290, -,-, 93218 LTR ERVL 1668 chr1 141975173 141975727 ENS1B-LTR 885 + 141975173 141975727 0 2 79,475, 0,79, +,+, 93221 LTR ERVL 1668 chr1 141975983 141976629 CR1-Y1_Aves 396 - 141975983 141976629 0 2 190,327, 0,319, -,-, 93222 LINE CR1 1668 chr1 141998386 141998919 CR1-Y2_Aves 241 + 141998386 141998919 0 2 270,191, 0,342, +,+, 93248 LINE CR1 1668 chr1 142038393 142039018 CR1-F2 344 - 142038393 142039018 0 2 165,455, 0,170, -,-, 93291 LINE CR1 1668 chr1 142041062 142041884 CR1-Y4 493 + 142041062 142041884 0 2 336,277, 0,545, +,+, 93295 LINE CR1 1668 chr1 142079309 142080543 CR1-E 624 - 142079309 142080543 0 2 562,153, 0,1081, -,-, 93347 LINE CR1 1669 chr1 142101832 142102981 Char12Mar1_GG 611 - 142101832 142102981 0 2 718,419, 0,730, -,-, 93373 DNA hAT-Charlie 1669 chr1 142128225 142130111 CR1-F2 273 - 142128225 142130111 0 2 625,390, 0,1496, -,-, 93413 LINE CR1 1669 chr1 142142726 142146540 CR1-C 806 + 142142726 142146540 0 2 888,2407, 0,1407, +,+, 93431 LINE CR1 1669 chr1 142150058 142152065 CR1-E 321 - 142150058 142152065 0 2 998,236, 0,1771, -,-, 93435 LINE CR1 1669 chr1 142162614 142165104 CR1-G 829 + 142162614 142165104 0 2 1198,404, 0,2086, +,+, 93455 LINE CR1 1669 chr1 142167850 142170443 CR1-D 686 - 142167850 142170443 0 3 1241,248,554, 0,1241,2039, -,-,-, 93463 LINE CR1 1669 chr1 142172277 142174081 Mariner1_GG 595 - 142172277 142174081 0 2 303,990, 0,814, -,-, 93469 DNA TcMar-Mariner 1669 chr1 142174305 142176505 CR1-C2 630 + 142174305 142176505 0 2 1992,208, 0,1992, +,+, 93470 LINE CR1 1669 chr1 142188242 142189121 GGLTR3B4 517 + 142188242 142189121 0 2 267,233, 0,646, +,+, 93490 LTR ERVL 1669 chr1 142189217 142191284 CR1-F2 451 - 142189217 142191284 0 2 337,521, 0,1546, -,-, 93492 LINE CR1 1670 chr1 142225413 142227496 CR1-E 693 - 142225413 142227496 0 2 282,1008, 0,1075, -,-, 93528 LINE CR1 1670 chr1 142267211 142269600 CR1-F2 351 + 142267211 142269600 0 2 2243,146, 0,2243, +,+, 93575 LINE CR1 1670 chr1 142299859 142300221 CR1-Y2_Aves 264 + 142299859 142300221 0 2 109,185, 0,177, +,+, 93599 LINE CR1 1670 chr1 142318692 142322843 GGLTR5B 368 + 142318692 142322843 0 2 114,437, 0,3714, +,+, 93622 LTR ERVL 1670 chr1 142318806 142322389 GGERVL18-LTR 623 + 142318806 142322389 0 3 290,2979,156, 0,443,3427, +,+,+, 93623 LTR ERVL 1670 chr1 142335495 142336938 CR1-D2 659 + 142335495 142336938 0 2 170,396, 0,1047, +,+, 93632 LINE CR1 1671 chr1 142356070 142356988 GGLTR3C1 472 - 142356070 142356988 0 2 388,161, 0,757, -,-, 93651 LTR ERVL 1671 chr1 142374429 142375007 CR1-C3 516 + 142374429 142375007 0 2 357,221, 0,357, +,+, 93673 LINE CR1 1671 chr1 142398800 142399385 TguLTR5d 110 - 142398800 142399385 0 2 162,361, 0,224, -,-, 93690 LTR ERVL 1671 chr1 142405972 142406989 CR1-C4 584 + 142405972 142406989 0 2 635,368, 0,649, +,+, 93699 LINE CR1 1671 chr1 142445008 142445774 CR1-F0 230 - 142445008 142445774 0 2 481,251, 0,515, -,-, 93743 LINE CR1 1671 chr1 142455680 142457015 GGLTR5A 465 + 142455680 142457015 0 3 74,245,170, 0,895,1165, +,+,+, 93756 LTR ERVL 1671 chr1 142455754 142456575 GGLTR12B 778 + 142455754 142456575 0 2 663,121, 0,700, +,+, 93757 LTR ERVL 1671 chr1 142462156 142462481 CR1-F2 412 - 142462156 142462481 0 2 164,161, 0,164, -,-, 93764 LINE CR1 1672 chr1 142494121 142495655 CR1-Y2_Aves 288 - 142494121 142495655 0 2 1423,75, 0,1459, -,-, 93781 LINE CR1 1672 chr1 142508174 142509175 CR1-C4 591 + 142508174 142509175 0 2 526,475, 0,526, +,+, 93798 LINE CR1 1672 chr1 142522638 142524579 CR1-F2 561 - 142522638 142524579 0 2 292,1639, 0,302, -,-, 93811 LINE CR1 1672 chr1 142539032 142539310 CR1-D 462 - 142539032 142539310 0 2 178,55, 0,223, -,-, 93826 LINE CR1 1672 chr1 142550914 142552563 CR1-D 631 - 142550914 142552563 0 2 1160,232, 0,1417, -,-, 93834 LINE CR1 1672 chr1 142573580 142574957 CR1-F2 835 + 142573580 142574957 0 2 690,687, 0,690, +,+, 93847 LINE CR1 1672 chr1 142600945 142601412 CR1-D2 253 + 142600945 142601412 0 2 120,332, 0,135, +,+, 93876 LINE CR1 1673 chr1 142652433 142652743 CR1-B2 428 + 142652433 142652743 0 2 141,169, 0,141, +,+, 93918 LINE CR1 1673 chr1 142660391 142660468 (T)n 716 + 142660391 142660468 0 2 9,36, 0,41, +,+, 93925 Simple_repeat Simple_repeat 1673 chr1 142678756 142680223 CR1-C4 595 - 142678756 142680223 0 2 582,618, 0,849, -,-, 93934 LINE CR1 1673 chr1 142689074 142693746 ENS1-LTR 971 - 142689074 142693746 0 3 915,2840,915, 0,915,3757, -,-,-, 93940 LTR ERVL 1673 chr1 142698100 142699026 CR1-Y2_Aves 226 + 142698100 142699026 0 2 174,559, 0,367, +,+, 93942 LINE CR1 1673 chr1 142719334 142727437 CR1-C4 523 - 142719334 142727437 0 2 236,290, 0,7813, -,-, 93953 LINE CR1 1674 chr1 142748801 142749422 CR1-Y4 535 - 142748801 142749422 0 2 279,342, 0,279, -,-, 93969 LINE CR1 1674 chr1 142772371 142774513 CR1-F2 419 + 142772371 142774513 0 2 199,151, 0,1991, +,+, 93989 LINE CR1 1674 chr1 142778832 142779870 CR1-F2 468 + 142778832 142779870 0 2 707,209, 0,829, +,+, 93993 LINE CR1 1674 chr1 142792413 142795656 CR1-F0 518 - 142792413 142795656 0 2 26,164, 0,3079, -,-, 94004 LINE CR1 1674 chr1 142862616 142862979 Char12Mar1_GG 689 - 142862616 142862979 0 2 302,58, 0,305, -,-, 94051 DNA hAT-Charlie 1675 chr1 142875717 142875756 (TTTATT)n 532 + 142875717 142875756 0 2 12,7, 0,32, +,+, 94059 Simple_repeat Simple_repeat 1675 chr1 142903255 142904519 Char12Mar1_GG 566 - 142903255 142904519 0 2 883,359, 0,905, -,-, 94079 DNA hAT-Charlie 1675 chr1 142927352 142928111 CR1-D 695 + 142927352 142928111 0 2 471,288, 0,471, +,+, 94099 LINE CR1 1675 chr1 142932607 142934859 Char12Mar1_GG 572 - 142932607 142934859 0 2 46,894, 0,1358, -,-, 94102 DNA hAT-Charlie 1675 chr1 142948063 142948560 CR1-Y4 477 + 142948063 142948560 0 2 183,192, 0,305, +,+, 94109 LINE CR1 1676 chr1 143023715 143025594 CR1-L3B_Croc 191 + 143023715 143025594 0 4 358,103,186,163, 0,1161,1327,1716, +,+,+,+, 94156 LINE CR1 1676 chr1 143099319 143100213 CR1-Y1_Aves 169 + 143099319 143100213 0 2 706,137, 0,757, +,+, 94210 LINE CR1 1677 chr1 143229109 143229214 (TTG)n 782 + 143229109 143229214 0 2 37,33, 0,72, +,+, 94299 Simple_repeat Simple_repeat 1677 chr1 143260507 143260598 (T)n 851 + 143260507 143260598 0 2 32,20, 0,71, +,+, 94325 Simple_repeat Simple_repeat 1678 chr1 143272597 143273371 CR1-C2 500 - 143272597 143273371 0 2 74,135, 0,639, -,-, 94332 LINE CR1 1678 chr1 143325137 143328448 CR1-H 846 + 143325137 143328448 0 2 1286,1796, 0,1515, +,+, 94361 LINE CR1 1678 chr1 143345700 143346677 CR1-F2 503 - 143345700 143346677 0 2 604,45, 0,932, -,-, 94378 LINE CR1 1678 chr1 143373211 143374193 CR1-L3B_Croc 228 + 143373211 143374193 0 3 246,85,239, 0,386,743, +,+,+, 94405 LINE CR1 1679 chr1 143415768 143416921 CR1-D 168 - 143415768 143416921 0 2 327,115, 0,1038, -,-, 94425 LINE CR1 1679 chr1 143437212 143437853 GGLTR8A 514 - 143437212 143437853 0 2 200,427, 0,214, -,-, 94443 LTR ERVL 1679 chr1 143445812 143446585 Mariner1_GG 549 - 143445812 143446585 0 2 433,224, 0,549, -,-, 94449 DNA TcMar-Mariner 209 chr1 143517795 143525050 CR1-Y2 166 - 143517795 143525050 0 2 538,182, 0,7073, -,-, 94506 LINE CR1 1680 chr1 143546748 143547953 CR1-L3B_Croc 207 - 143546748 143547953 0 4 261,128,121,179, 0,552,725,1026, -,-,-,-, 94522 LINE CR1 1680 chr1 143563023 143564162 GGLTR4A 773 + 143563023 143564162 0 2 257,58, 0,1081, +,+, 94531 LTR ERVL 1680 chr1 143615252 143615920 CR1-Y2_Aves 306 + 143615252 143615920 0 2 504,117, 0,551, +,+, 94561 LINE CR1 1680 chr1 143640678 143641741 CR1-Y4 363 - 143640678 143641741 0 2 201,531, 0,532, -,-, 94576 LINE CR1 1681 chr1 143708088 143710031 CR1-Y1_Aves 279 + 143708088 143710031 0 2 301,660, 0,1283, +,+, 94608 LINE CR1 1681 chr1 143754993 143755675 GGLTR5A 506 - 143754993 143755675 0 2 140,350, 0,332, -,-, 94635 LTR ERVL 1681 chr1 143781871 143783491 Mariner1_GG 630 - 143781871 143783491 0 2 1031,279, 0,1341, -,-, 94655 DNA TcMar-Mariner 1682 chr1 143794535 143794945 CR1-C4 542 - 143794535 143794945 0 2 253,157, 0,253, -,-, 94667 LINE CR1 1682 chr1 143815920 143817216 GGLTR5A 533 + 143815920 143817216 0 2 57,549, 0,747, +,+, 94684 LTR ERVL 1682 chr1 143831458 143832598 CR1-C4 551 - 143831458 143832598 0 2 177,589, 0,551, -,-, 94693 LINE CR1 1683 chr1 143942314 143943570 CR1-Y2_Aves 86 - 143942314 143943570 0 2 324,166, 0,1090, -,-, 94763 LINE CR1 1683 chr1 144015442 144016071 CR1-D2 793 - 144015442 144016071 0 2 209,413, 0,216, -,-, 94813 LINE CR1 1684 chr1 144144880 144145173 Charlie12_GG 302 - 144144880 144145173 0 2 121,62, 0,231, -,-, 94875 DNA hAT-Charlie 1684 chr1 144158059 144159553 CR1-X 190 + 144158059 144159553 0 2 182,1312, 0,182, +,+, 94886 LINE CR1 1685 chr1 144191690 144193693 CR1-E 601 + 144191690 144193693 0 2 240,1430, 0,573, +,+, 94901 LINE CR1 1685 chr1 144196963 144197727 Char12Mar1_GG 662 - 144196963 144197727 0 2 454,61, 0,703, -,-, 94904 DNA hAT-Charlie 1685 chr1 144227964 144230027 Charlie12_GG 515 - 144227964 144230027 0 4 293,1107,184,116, 0,642,1749,1947, -,-,-,-, 94915 DNA hAT-Charlie 1685 chr1 144230280 144231327 CR1-Y2_Aves 92 - 144230280 144231327 0 2 647,279, 0,768, -,-, 94917 LINE CR1 1685 chr1 144232206 144232779 CR1-Y4 542 - 144232206 144232779 0 2 123,446, 0,127, -,-, 94918 LINE CR1 1685 chr1 144250884 144251596 GGLTR8A 509 - 144250884 144251596 0 2 237,475, 0,237, -,-, 94926 LTR ERVL 1685 chr1 144274892 144274964 (TA)n 820 + 144274892 144274964 0 2 26,30, 0,42, +,+, 94941 Simple_repeat Simple_repeat 1685 chr1 144307748 144307788 (ACATAT)n 522 + 144307748 144307788 0 2 8,9, 0,31, +,+, 95022 Simple_repeat Simple_repeat 1686 chr1 144376615 144377397 CR1-Y2_Aves 125 - 144376615 144377397 0 2 413,211, 0,571, -,-, 95057 LINE CR1 1686 chr1 144388987 144389612 CR1-Y1_Aves 246 - 144388987 144389612 0 2 22,452, 0,173, -,-, 95067 LINE CR1 1686 chr1 144430650 144430806 CR1-F2 751 - 144430650 144430806 0 2 42,114, 0,42, -,-, 95089 LINE CR1 1687 chr1 144512429 144514762 CR1-F 573 + 144512429 144514762 0 2 766,1531, 0,802, +,+, 95134 LINE CR1 1687 chr1 144534585 144534994 CR1-C3 732 + 144534585 144534994 0 2 330,39, 0,370, +,+, 95144 LINE CR1 1688 chr1 144580204 144581047 CR1-Y4 309 + 144580204 144581047 0 3 310,130,143, 0,319,700, +,+,+, 95167 LINE CR1 1688 chr1 144590828 144591838 CR1-L3B_Croc 305 + 144590828 144591838 0 2 122,235, 0,775, +,+, 95175 LINE CR1 1688 chr1 144604685 144605225 CR1-Y2_Aves 161 + 144604685 144605225 0 2 291,179, 0,361, +,+, 95184 LINE CR1 1688 chr1 144611789 144611935 CR1-Y1_Aves 441 + 144611789 144611935 0 2 104,42, 0,104, +,+, 95191 LINE CR1 1688 chr1 144633114 144634564 CR1-Y2_Aves 280 - 144633114 144634564 0 2 302,606, 0,844, -,-, 95207 LINE CR1 1688 chr1 144696603 144696931 Charlie12_GG 465 - 144696603 144696931 0 2 82,129, 0,199, -,-, 95250 DNA hAT-Charlie 1689 chr1 144749739 144751346 CR1-X2 488 - 144749739 144751346 0 2 1403,204, 0,1403, -,-, 95283 LINE CR1 1689 chr1 144806685 144807039 CR1-D 670 + 144806685 144807039 0 2 255,99, 0,255, +,+, 95317 LINE CR1 1690 chr1 144883037 144883242 CR1-C4 640 - 144883037 144883242 0 2 160,45, 0,160, -,-, 95353 LINE CR1 1691 chr1 145033545 145035111 CR1-B2 245 - 145033545 145035111 0 2 196,1370, 0,196, -,-, 95420 LINE CR1 1691 chr1 145068362 145068478 CR1-C3 666 + 145068362 145068478 0 2 55,61, 0,55, +,+, 95434 LINE CR1 1692 chr1 145098479 145098740 CR1-F2 772 + 145098479 145098740 0 2 149,72, 0,189, +,+, 95451 LINE CR1 1692 chr1 145162379 145167379 CR1-C 733 + 145162379 145167379 0 2 85,130, 0,4870, +,+, 95492 LINE CR1 1692 chr1 145187488 145189622 CR1-11_Crp 52 + 145187488 145189622 0 2 409,170, 0,1964, +,+, 95514 LINE CR1 1693 chr1 145232297 145232728 Char12Mar1_GG 635 - 145232297 145232728 0 2 111,320, 0,111, -,-, 95539 DNA hAT-Charlie 1693 chr1 145236985 145237740 CR1-8_Crp 162 - 145236985 145237740 0 2 482,253, 0,502, -,-, 95542 LINE CR1 1693 chr1 145241688 145243092 CR1-D2 687 + 145241688 145243092 0 2 705,699, 0,705, +,+, 95544 LINE CR1 1693 chr1 145246969 145248082 CR1-L3A_Croc 181 - 145246969 145248082 0 2 321,167, 0,946, -,-, 95547 LINE CR1 1693 chr1 145292044 145294131 CR1-Y4 607 - 145292044 145294131 0 3 251,60,359, 0,263,1728, -,-,-, 95582 LINE CR1 1694 chr1 145486981 145488337 CR1-C4 579 + 145486981 145488337 0 2 554,162, 0,1194, +,+, 95682 LINE CR1 1696 chr1 145697649 145698655 CR1-F2 478 + 145697649 145698655 0 2 292,53, 0,953, +,+, 95832 LINE CR1 1696 chr1 145697940 145698616 CR1-E 640 + 145697940 145698616 0 2 290,365, 0,311, +,+, 95833 LINE CR1 1697 chr1 145762106 145762825 CR1-D 706 - 145762106 145762825 0 2 262,457, 0,262, -,-, 95876 LINE CR1 1697 chr1 145764062 145764352 Char12Mar1_GG 665 - 145764062 145764352 0 2 204,84, 0,206, -,-, 95878 DNA hAT-Charlie 1697 chr1 145817289 145818041 CR1-Y4 660 + 145817289 145818041 0 2 713,39, 0,713, +,+, 95911 LINE CR1 1697 chr1 145841259 145842004 CR1-H 794 + 145841259 145842004 0 2 463,282, 0,463, +,+, 95933 LINE CR1 1697 chr1 145843059 145843519 CR1-Y2_Aves 308 - 145843059 145843519 0 2 144,220, 0,240, -,-, 95934 LINE CR1 1697 chr1 145848001 145848664 CR1-C3 528 + 145848001 145848664 0 2 289,374, 0,289, +,+, 95939 LINE CR1 1697 chr1 145868127 145868430 CR1-D2 741 + 145868127 145868430 0 2 47,256, 0,47, +,+, 95954 LINE CR1 1698 chr1 145913516 145914512 CR1-C4 444 - 145913516 145914512 0 2 555,441, 0,555, -,-, 95983 LINE CR1 1699 chr1 146025368 146027065 CR1-G 783 + 146025368 146027065 0 2 952,743, 0,954, +,+, 96044 LINE CR1 1699 chr1 146065007 146065288 CR1-C2 781 + 146065007 146065288 0 2 147,134, 0,147, +,+, 96067 LINE CR1 1699 chr1 146084965 146090108 CR1-F2 423 + 146084965 146090108 0 2 1019,267, 0,4876, +,+, 96077 LINE CR1 1699 chr1 146086220 146086677 GGLTR11-int 378 + 146086220 146086677 0 2 317,137, 0,320, +,+, 96079 LTR ERV1 1699 chr1 146110285 146112960 CR1-F2 497 - 146110285 146112960 0 2 243,224, 0,2451, -,-, 96094 LINE CR1 1699 chr1 146124163 146125600 CR1-Y4 463 + 146124163 146125600 0 3 82,351,176, 0,907,1261, +,+,+, 96103 LINE CR1 1700 chr1 146229640 146230163 CR1-D2 283 + 146229640 146230163 0 2 149,203, 0,320, +,+, 96164 LINE CR1 1700 chr1 146248397 146251094 CR1-E 773 - 146248397 146251094 0 2 1627,1070, 0,1627, -,-, 96176 LINE CR1 1701 chr1 146362896 146363019 (TTCTC)n 290 + 146362896 146363019 0 2 7,37, 0,86, +,+, 96239 Simple_repeat Simple_repeat 1701 chr1 146383941 146384911 CR1-F2 695 - 146383941 146384911 0 2 312,56, 0,914, -,-, 96249 LINE CR1 1702 chr1 146435873 146435997 (T)n 771 + 146435873 146435997 0 2 30,31, 0,93, +,+, 96303 Simple_repeat Simple_repeat 1703 chr1 146613639 146615956 CR1-D2 665 + 146613639 146615956 0 2 2225,92, 0,2225, +,+, 96398 LINE CR1 1704 chr1 146692044 146692611 GGLTR8B 294 + 146692044 146692611 0 2 260,130, 0,437, +,+, 96452 LTR ERVL 1704 chr1 146757865 146757922 (AGTAT)n 424 + 146757865 146757922 0 2 7,15, 0,42, +,+, 96492 Simple_repeat Simple_repeat 1704 chr1 146774287 146774743 TguLTR5e 416 + 146774287 146774743 0 2 239,147, 0,309, +,+, 96505 LTR ERVL 1704 chr1 146782336 146783776 CR1-Y2_Aves 385 + 146782336 146783776 0 3 489,741,101, 0,498,1339, +,+,+, 96514 LINE CR1 1705 chr1 146809620 146810432 GGLTR8A 402 - 146809620 146810432 0 2 162,118, 0,694, -,-, 96539 LTR ERVL 1705 chr1 146820100 146820423 LFSINE_Vert 455 + 146820100 146820423 0 2 51,75, 0,248, +,+, 96548 SINE tRNA 1706 chr1 146952782 146953222 GGERVL-A-int 328 + 146952782 146953222 0 2 187,244, 0,196, +,+, 96668 LTR ERVL 1706 chr1 147014938 147015334 GGERVL18-LTR 642 + 147014938 147015334 0 2 198,169, 0,227, +,+, 96723 LTR ERVL 1706 chr1 147019883 147020864 ENS1B-LTR 461 + 147019883 147020864 0 2 131,442, 0,539, +,+, 96726 LTR ERVL 213 chr1 147061926 147063730 CR1-C4 569 + 147061926 147063730 0 2 1315,489, 0,1315, +,+, 96763 LINE CR1 1707 chr1 147070657 147070849 REP131 487 - 147070657 147070849 0 2 148,44, 0,148, -,-, 96772 DNA? DNA? 1707 chr1 147086580 147087396 CR1-Y2_Aves 358 + 147086580 147087396 0 2 301,466, 0,350, +,+, 96789 LINE CR1 1707 chr1 147091348 147092461 CR1-C2 720 + 147091348 147092461 0 3 481,274,14, 0,782,1099, +,+,+, 96793 LINE CR1 1707 chr1 147096434 147098214 CR1-D2 638 + 147096434 147098214 0 2 289,922, 0,858, +,+, 96797 LINE CR1 1707 chr1 147124413 147125468 CR1-Y3 558 + 147124413 147125468 0 2 585,470, 0,585, +,+, 96826 LINE CR1 1707 chr1 147187491 147188508 CR1-Y3 592 - 147187491 147188508 0 2 874,142, 0,875, -,-, 96881 LINE CR1 1708 chr1 147195143 147195979 CR1-Y2_Aves 64 - 147195143 147195979 0 2 620,161, 0,675, -,-, 96885 LINE CR1 1708 chr1 147203683 147204568 CR1-E 377 + 147203683 147204568 0 2 215,310, 0,575, +,+, 96890 LINE CR1 1708 chr1 147205821 147206979 CR1-X2 530 + 147205821 147206979 0 2 143,693, 0,465, +,+, 96893 LINE CR1 1708 chr1 147307551 147308800 CR1-F2 422 + 147307551 147308800 0 2 259,990, 0,259, +,+, 96983 LINE CR1 1709 chr1 147343983 147344616 CR1-Y1_Aves 403 + 147343983 147344616 0 2 527,106, 0,527, +,+, 97015 LINE CR1 1709 chr1 147377626 147377840 Char12Mar1_GG 507 - 147377626 147377840 0 2 142,72, 0,142, -,-, 97055 DNA hAT-Charlie 1709 chr1 147397195 147400399 GGLTR5B 466 + 147397195 147400399 0 2 72,58, 0,3146, +,+, 97072 LTR ERVL 1709 chr1 147398426 147398981 CR1-F0 306 - 147398426 147398981 0 2 400,155, 0,400, -,-, 97074 LINE CR1 1709 chr1 147402297 147405844 Char12Mar1_GG 657 - 147402297 147405844 0 3 57,161,94, 0,82,3453, -,-,-, 97077 DNA hAT-Charlie 1710 chr1 147474697 147476807 CR1-Y 392 - 147474697 147476807 0 2 1821,280, 0,1830, -,-, 97142 LINE CR1 1710 chr1 147481746 147483446 CR1-C4 513 - 147481746 147483446 0 2 1251,449, 0,1251, -,-, 97146 LINE CR1 1710 chr1 147500523 147502658 CR1-F2 625 + 147500523 147502658 0 3 337,546,79, 0,346,2056, +,+,+, 97163 LINE CR1 1710 chr1 147501414 147502594 CR1-G 805 - 147501414 147502594 0 2 92,593, 0,587, -,-, 97164 LINE CR1 1710 chr1 147518569 147519377 CR1-Y4 516 - 147518569 147519377 0 2 715,93, 0,715, -,-, 97183 LINE CR1 1710 chr1 147520210 147520522 GGERV10_LTR 470 - 147520210 147520522 0 2 155,65, 0,247, -,-, 97185 LTR ERVL 1710 chr1 147525542 147526196 GGLTR8B 226 - 147525542 147526196 0 2 176,259, 0,395, -,-, 97190 LTR ERVL 1710 chr1 147530904 147531678 GGLTR8B 316 + 147530904 147531678 0 2 470,173, 0,601, +,+, 97195 LTR ERVL 1710 chr1 147574873 147574949 (TCTT)n 488 + 147574873 147574949 0 2 8,12, 0,64, +,+, 97250 Simple_repeat Simple_repeat 1711 chr1 147605115 147606474 CR1-C4 297 + 147605115 147606474 0 2 117,693, 0,666, +,+, 97286 LINE CR1 1711 chr1 147655461 147655738 CR1-B 510 - 147655461 147655738 0 2 163,114, 0,163, -,-, 97334 LINE CR1 1711 chr1 147683729 147683851 (T)n 701 + 147683729 147683851 0 2 45,39, 0,83, +,+, 97351 Simple_repeat Simple_repeat 1711 chr1 147683918 147687746 ENS1-int 429 + 147683918 147687746 0 3 2600,504,724, 0,2600,3104, +,+,+, 97352 LTR ERVL 1711 chr1 147688898 147689777 CR1-X2 120 + 147688898 147689777 0 2 371,464, 0,415, +,+, 97354 LINE CR1 1711 chr1 147690068 147690732 CR1-F2 612 + 147690068 147690732 0 2 459,204, 0,460, +,+, 97357 LINE CR1 1711 chr1 147690908 147691267 CR1-E 470 - 147690908 147691267 0 2 158,201, 0,158, -,-, 97358 LINE CR1 1712 chr1 147742280 147743144 CR1-Y1_Aves 410 - 147742280 147743144 0 2 94,258, 0,606, -,-, 97399 LINE CR1 1712 chr1 147743127 147746314 CR1-E 666 + 147743127 147746314 0 3 1280,765,779, 0,1280,2408, +,+,+, 97401 LINE CR1 1712 chr1 147767807 147767868 (TTTTGT)n 626 + 147767807 147767868 0 2 7,22, 0,39, +,+, 97420 Simple_repeat Simple_repeat 1712 chr1 147769520 147769714 GGLTR3A 905 - 147769520 147769714 0 2 113,81, 0,113, -,-, 97422 LTR ERVL 1712 chr1 147777132 147778887 CR1-F 491 - 147777132 147778887 0 2 1083,216, 0,1539, -,-, 97433 LINE CR1 1712 chr1 147778228 147778511 CR1-Y4 643 + 147778228 147778511 0 2 152,126, 0,157, +,+, 97434 LINE CR1 1712 chr1 147785036 147787364 CR1-C4 572 - 147785036 147787364 0 2 1490,479, 0,1849, -,-, 97446 LINE CR1 1712 chr1 147790136 147790600 GGLTR8A 611 - 147790136 147790600 0 3 35,199,228, 0,37,236, -,-,-, 97451 LTR ERVL 1712 chr1 147798478 147798862 GGLTR5A 549 + 147798478 147798862 0 2 194,142, 0,242, +,+, 97457 LTR ERVL 1712 chr1 147816417 147816713 GGLTR5B 370 - 147816417 147816713 0 2 135,144, 0,152, -,-, 97476 LTR ERVL 1712 chr1 147820984 147821034 (TTAT)n 408 + 147820984 147821034 0 2 14,15, 0,35, +,+, 97478 Simple_repeat Simple_repeat 1712 chr1 147826616 147827054 CR1-D 656 - 147826616 147827054 0 2 218,220, 0,218, -,-, 97484 LINE CR1 1712 chr1 147839908 147843178 GGLTR5A 568 + 147839908 147843178 0 2 368,69, 0,3201, +,+, 97499 LTR ERVL 1713 chr1 147856356 147857540 CR1-F2 537 + 147856356 147857540 0 2 429,330, 0,854, +,+, 97512 LINE CR1 1713 chr1 147897527 147898076 CR1-G 199 - 147897527 147898076 0 2 350,184, 0,365, -,-, 97548 LINE CR1 1713 chr1 147937396 147937629 CR1-D2 746 + 147937396 147937629 0 2 66,158, 0,75, +,+, 97588 LINE CR1 1713 chr1 147942249 147944080 CR1-E 592 + 147942249 147944080 0 2 1747,84, 0,1747, +,+, 97594 LINE CR1 1713 chr1 147944113 147944561 GGLTR12C 264 + 147944113 147944561 0 2 47,375, 0,73, +,+, 97595 LTR ERVL 1714 chr1 147982722 147983121 CR1-C4 481 + 147982722 147983121 0 2 348,51, 0,348, +,+, 97627 LINE CR1 1714 chr1 148027314 148027514 (CGCGG)n 274 + 148027314 148027514 0 2 149,26, 0,174, +,+, 97661 Simple_repeat Simple_repeat 1714 chr1 148096771 148097524 GGERVL-A-int 100 - 148096771 148097524 0 2 240,272, 0,481, -,-, 97723 LTR ERVL 1715 chr1 148120466 148121664 GGLTR5A 494 + 148120466 148121664 0 2 352,236, 0,962, +,+, 97740 LTR ERVL 1715 chr1 148127171 148128480 GGERVL-C-int 233 + 148127171 148128480 0 3 221,382,132, 0,794,1177, +,+,+, 97744 LTR ERVL 1715 chr1 148202985 148208975 CR1-C2 710 + 148202985 148208975 0 3 1343,233,435, 0,4522,5555, +,+,+, 97809 LINE CR1 1715 chr1 148220482 148221913 CR1-Y1_Aves 435 + 148220482 148221913 0 3 711,164,289, 0,813,1142, +,+,+, 97828 LINE CR1 1715 chr1 148237180 148238116 CR1-Y4 491 - 148237180 148238116 0 2 77,151, 0,785, -,-, 97845 LINE CR1 1716 chr1 148246832 148248073 CR1-C3 680 - 148246832 148248073 0 2 133,1108, 0,133, -,-, 97858 LINE CR1 1716 chr1 148257888 148257951 (ATTTAA)n 622 + 148257888 148257951 0 2 13,17, 0,46, +,+, 97870 Simple_repeat Simple_repeat 1716 chr1 148269326 148269557 CR1-Y1_Aves 482 + 148269326 148269557 0 2 106,122, 0,109, +,+, 97878 LINE CR1 1716 chr1 148269545 148269857 CR1-Y2_Aves 231 - 148269545 148269857 0 2 228,84, 0,228, -,-, 97879 LINE CR1 1716 chr1 148273631 148275018 GGERVL-B-int 775 + 148273631 148275018 0 2 562,825, 0,562, +,+, 97887 LTR ERVL 1716 chr1 148283016 148283443 Mariner1b_GG 646 - 148283016 148283443 0 2 358,69, 0,358, -,-, 97897 DNA TcMar-Mariner 1716 chr1 148292217 148294026 CR1-F2 633 + 148292217 148294026 0 2 659,261, 0,1548, +,+, 97907 LINE CR1 1716 chr1 148337337 148338037 CR1-F0 174 + 148337337 148338037 0 2 323,355, 0,345, +,+, 97960 LINE CR1 1716 chr1 148352346 148353434 CR1-C 770 + 148352346 148353434 0 2 159,929, 0,159, +,+, 97977 LINE CR1 1717 chr1 148376013 148379042 GGERVL-C-int 737 + 148376013 148379042 0 2 2510,519, 0,2510, +,+, 97999 LTR ERVL 1717 chr1 148399613 148399677 A-rich 504 + 148399613 148399677 0 2 20,13, 0,51, +,+, 98023 Low_complexity Low_complexity 1717 chr1 148401039 148404041 CR1-X 142 + 148401039 148404041 0 2 951,2051, 0,951, +,+, 98025 LINE CR1 1717 chr1 148409567 148410091 GGLTR8B 294 - 148409567 148410091 0 2 267,107, 0,417, -,-, 98029 LTR ERVL 1717 chr1 148417149 148417251 (A)n 876 + 148417149 148417251 0 2 19,35, 0,67, +,+, 98041 Simple_repeat Simple_repeat 1717 chr1 148437874 148437976 G-rich 400 + 148437874 148437976 0 2 24,12, 0,90, +,+, 98065 Low_complexity Low_complexity 1717 chr1 148440652 148441356 CR1-F2 561 + 148440652 148441356 0 2 156,548, 0,156, +,+, 98073 LINE CR1 1717 chr1 148448592 148451351 GGERVL18-int 778 + 148448592 148451351 0 3 892,1237,250, 0,1272,2509, +,+,+, 98082 LTR ERVL 1717 chr1 148451417 148452073 GGLTR5A 405 - 148451417 148452073 0 2 329,263, 0,393, -,-, 98085 LTR ERVL 1717 chr1 148455543 148457114 CR1-C4 652 - 148455543 148457114 0 2 780,36, 0,1535, -,-, 98091 LINE CR1 1717 chr1 148456323 148457059 GGLTR12C 521 - 148456323 148457059 0 2 250,109, 0,627, -,-, 98092 LTR ERVL 1717 chr1 148459239 148460049 CR1-C4 270 - 148459239 148460049 0 2 714,84, 0,726, -,-, 98095 LINE CR1 1717 chr1 148479001 148483274 CR1-X 202 + 148479001 148483274 0 3 636,943,693, 0,929,3580, +,+,+, 98129 LINE CR1 1717 chr1 148480876 148482603 CR1-D2 551 - 148480876 148482603 0 2 198,914, 0,813, -,-, 98131 LINE CR1 1717 chr1 148497809 148498936 CR1-F2 595 - 148497809 148498936 0 2 949,148, 0,979, -,-, 98156 LINE CR1 1718 chr1 148504596 148508241 CR1-X2 213 - 148504596 148508241 0 2 736,709, 0,2936, -,-, 98164 LINE CR1 1718 chr1 148524193 148525162 GGLTR3C2 488 - 148524193 148525162 0 2 188,455, 0,514, -,-, 98194 LTR ERVL 1718 chr1 148524380 148524707 GGERV10_LTR 653 + 148524380 148524707 0 2 79,160, 0,167, +,+, 98195 LTR ERVL 1718 chr1 148534399 148538525 CR1-C 825 - 148534399 148538525 0 2 712,3414, 0,712, -,-, 98207 LINE CR1 1718 chr1 148540919 148541157 GGLTR12C 402 + 148540919 148541157 0 2 135,66, 0,172, +,+, 98210 LTR ERVL 1718 chr1 148553779 148555393 GGERVK1-int 939 - 148553779 148555393 0 3 241,567,806, 0,241,808, -,-,-, 98224 LTR ERVK 1718 chr1 148564591 148566408 CR1-Y3 833 - 148564591 148566408 0 3 172,171,1453, 0,172,364, -,-,-, 98237 LINE CR1 1718 chr1 148594810 148596054 GGERVL-C-int 715 + 148594810 148596054 0 2 755,489, 0,755, +,+, 98275 LTR ERVL 1718 chr1 148611804 148613481 CR1-C3 671 + 148611804 148613481 0 2 280,548, 0,1129, +,+, 98296 LINE CR1 1718 chr1 148614121 148617736 CR1-C 814 - 148614121 148617736 0 2 32,3583, 0,32, -,-, 98301 LINE CR1 1719 chr1 148642856 148642954 (T)n 948 + 148642856 148642954 0 2 20,22, 0,76, +,+, 98334 Simple_repeat Simple_repeat 1719 chr1 148646814 148648248 GGERVL-A-int 240 + 148646814 148648248 0 2 144,380, 0,1054, +,+, 98342 LTR ERVL 1719 chr1 148648348 148649566 GGERVL-A-int 355 + 148648348 148649566 0 2 130,192, 0,1026, +,+, 98345 LTR ERVL 1719 chr1 148649618 148650898 Char12Mar1_GG 590 - 148649618 148650898 0 2 460,56, 0,1224, -,-, 98347 DNA hAT-Charlie 1719 chr1 148668715 148668866 GA-rich 540 + 148668715 148668866 0 2 20,17, 0,134, +,+, 98371 Low_complexity Low_complexity 1719 chr1 148679157 148679954 CR1-X2 377 + 148679157 148679954 0 2 220,156, 0,641, +,+, 98392 LINE CR1 1719 chr1 148683156 148684307 GGLTR5B 613 + 148683156 148684307 0 2 375,161, 0,990, +,+, 98399 LTR ERVL 1719 chr1 148700705 148700999 GGLTR5B 376 - 148700705 148700999 0 2 98,147, 0,147, -,-, 98422 LTR ERVL 1719 chr1 148739267 148740994 CR1-C4 491 + 148739267 148740994 0 2 1097,630, 0,1097, +,+, 98467 LINE CR1 1719 chr1 148744334 148746791 GGERVL-C-int 757 - 148744334 148746791 0 2 508,1949, 0,508, -,-, 98474 LTR ERVL 1719 chr1 148746789 148748646 GGERVL-A-int 707 - 148746789 148748646 0 3 329,714,804, 0,329,1053, -,-,-, 98475 LTR ERVL 1719 chr1 148751570 148751611 (GTTTTA)n 468 + 148751570 148751611 0 2 7,6, 0,35, +,+, 98480 Simple_repeat Simple_repeat 1719 chr1 148760297 148760717 GGLTR3F2 736 + 148760297 148760717 0 2 228,145, 0,275, +,+, 98489 LTR ERVL 1720 chr1 148777891 148778242 CR1-Y2_Aves 312 + 148777891 148778242 0 2 237,103, 0,248, +,+, 98517 LINE CR1 1720 chr1 148787703 148788427 CR1-C4 622 - 148787703 148788427 0 2 30,204, 0,520, -,-, 98529 LINE CR1 1720 chr1 148794032 148796051 CR1-G 813 - 148794032 148796051 0 2 672,1347, 0,672, -,-, 98543 LINE CR1 1720 chr1 148833655 148834044 GGLTR5A 436 + 148833655 148834044 0 2 263,126, 0,263, +,+, 98593 LTR ERVL 1720 chr1 148834166 148835044 GGLTR8B 360 + 148834166 148835044 0 2 205,663, 0,215, +,+, 98594 LTR ERVL 1720 chr1 148836667 148842280 CR1-C4 428 + 148836667 148842280 0 2 286,240, 0,5373, +,+, 98600 LINE CR1 1720 chr1 148836998 148841643 ENS1-LTR 974 - 148836998 148841643 0 3 913,2819,913, 0,913,3732, -,-,-, 98601 LTR ERVL 1720 chr1 148875941 148879037 CR1-Y2_Aves 299 + 148875941 148879037 0 2 63,172, 0,2924, +,+, 98634 LINE CR1 1720 chr1 148882796 148888432 GGERVL18-int 635 + 148882796 148888432 0 2 322,5291, 0,345, +,+, 98644 LTR ERVL 1721 chr1 148901334 148901820 ENS1B-LTR 884 - 148901334 148901820 0 2 278,208, 0,278, -,-, 98669 LTR ERVL 1721 chr1 148907838 148910227 CR1-C 810 + 148907838 148910227 0 2 1071,845, 0,1544, +,+, 98677 LINE CR1 1721 chr1 148917992 148919415 GGLTR5A 442 + 148917992 148919415 0 2 317,68, 0,1355, +,+, 98689 LTR ERVL 1721 chr1 148921132 148921660 GGLTR5A 208 - 148921132 148921660 0 2 412,91, 0,437, -,-, 98693 LTR ERVL 1721 chr1 148946590 148947024 Char12Mar1_GG 579 - 148946590 148947024 0 2 49,301, 0,133, -,-, 98729 DNA hAT-Charlie 1721 chr1 148954695 148954798 (T)n 726 + 148954695 148954798 0 2 32,29, 0,74, +,+, 98735 Simple_repeat Simple_repeat 1721 chr1 148964520 148966488 CR1-D2 542 + 148964520 148966488 0 4 528,647,157,83, 0,800,1447,1885, +,+,+,+, 98747 LINE CR1 1721 chr1 148966478 148969544 CR1-X 190 - 148966478 148969544 0 2 377,143, 0,2923, -,-, 98749 LINE CR1 1721 chr1 148971397 148973798 CR1-Y2_Aves 286 - 148971397 148973798 0 2 506,318, 0,2083, -,-, 98757 LINE CR1 1721 chr1 148981418 148982054 CR1-E 564 + 148981418 148982054 0 2 396,66, 0,570, +,+, 98775 LINE CR1 1721 chr1 148990430 148990696 CR1-C 241 - 148990430 148990696 0 2 93,173, 0,93, -,-, 98786 LINE CR1 1721 chr1 148991724 148992171 CR1-F2 384 - 148991724 148992171 0 2 314,130, 0,317, -,-, 98790 LINE CR1 1721 chr1 148995193 148996740 CR1-Y4 425 + 148995193 148996740 0 2 756,403, 0,1144, +,+, 98795 LINE CR1 1721 chr1 149022254 149022704 CR1-F 197 + 149022254 149022704 0 2 78,358, 0,92, +,+, 98827 LINE CR1 1722 chr1 149033758 149037167 CR1-C 665 - 149033758 149037167 0 3 1519,142,1219, 0,1519,2190, -,-,-, 98844 LINE CR1 1722 chr1 149056799 149056902 (A)n 1000 + 149056799 149056902 0 2 18,26, 0,77, +,+, 98872 Simple_repeat Simple_repeat 1722 chr1 149057140 149064054 CR1-D 241 + 149057140 149064054 0 2 278,130, 0,6784, +,+, 98873 LINE CR1 1722 chr1 149057417 149060231 GGERVL-A-int 811 - 149057417 149060231 0 3 239,699,836, 0,1279,1978, -,-,-, 98874 LTR ERVL 1722 chr1 149062775 149063924 GGERVL-C-int 698 + 149062775 149063924 0 4 513,33,89,488, 0,513,572,661, +,+,+,+, 98879 LTR ERVL 1722 chr1 149065488 149066390 ENS1-LTR 479 + 149065488 149066390 0 3 95,49,229, 0,252,673, +,+,+, 98885 LTR ERVL 1722 chr1 149077225 149078112 CR1-C4 573 + 149077225 149078112 0 2 342,541, 0,346, +,+, 98899 LINE CR1 1722 chr1 149086097 149086956 CR1-Y1_Aves 385 - 149086097 149086956 0 2 542,317, 0,542, -,-, 98917 LINE CR1 1722 chr1 149089744 149092254 CR1-D2 591 - 149089744 149092254 0 2 844,280, 0,2230, -,-, 98919 LINE CR1 1722 chr1 149095071 149096698 Mariner1_GG 502 - 149095071 149096698 0 2 333,961, 0,666, -,-, 98925 DNA TcMar-Mariner 1722 chr1 149099341 149101952 CR1-Y3 593 - 149099341 149101952 0 2 753,1361, 0,1250, -,-, 98932 LINE CR1 1722 chr1 149106694 149111498 CR1-F2 883 + 149106694 149111498 0 2 578,393, 0,4411, +,+, 98943 LINE CR1 1722 chr1 149107271 149107750 GGLTR3F2 834 + 149107271 149107750 0 2 224,210, 0,269, +,+, 98944 LTR ERVL 1722 chr1 149122307 149123259 ENS1B-LTR 486 + 149122307 149123259 0 2 361,452, 0,500, +,+, 98966 LTR ERVL 1722 chr1 149124852 149126135 CR1-Y4 410 - 149124852 149126135 0 2 210,275, 0,1008, -,-, 98968 LINE CR1 1722 chr1 149126307 149126631 Mariner1_GG 439 - 149126307 149126631 0 2 223,101, 0,223, -,-, 98970 DNA TcMar-Mariner 1722 chr1 149126629 149127566 CR1-C2 816 - 149126629 149127566 0 2 371,128, 0,809, -,-, 98971 LINE CR1 1722 chr1 149127108 149127461 (TCTCC)n 872 + 149127108 149127461 0 2 179,163, 0,190, +,+, 98973 Simple_repeat Simple_repeat 1722 chr1 149129906 149131652 CR1-C4 483 - 149129906 149131652 0 3 430,469,320, 0,957,1426, -,-,-, 98978 LINE CR1 1722 chr1 149132511 149135961 CR1-D 611 - 149132511 149135961 0 2 179,533, 0,2917, -,-, 98980 LINE CR1 1722 chr1 149152223 149153201 CR1-Y2_Aves 232 - 149152223 149153201 0 2 256,690, 0,288, -,-, 99013 LINE CR1 1723 chr1 149171265 149172347 ENS1B-LTR 447 - 149171265 149172347 0 3 444,154,109, 0,467,973, -,-,-, 99037 LTR ERVL 1723 chr1 149186975 149187838 GGLTR8B 204 + 149186975 149187838 0 2 579,239, 0,624, +,+, 99055 LTR ERVL 1723 chr1 149192250 149192916 GGLTR3C2 576 - 149192250 149192916 0 3 123,294,121, 0,164,545, -,-,-, 99060 LTR ERVL 1723 chr1 149194083 149195652 CR1-X2 320 - 149194083 149195652 0 2 295,140, 0,1429, -,-, 99066 LINE CR1 1723 chr1 149202666 149203178 CR1-D2 541 + 149202666 149203178 0 3 46,95,268, 0,46,244, +,+,+, 99077 LINE CR1 1723 chr1 149217772 149221700 GGLTR7A 842 - 149217772 149221700 0 2 3318,610, 0,3318, -,-, 99097 LTR ERV1 1723 chr1 149231687 149233542 GGLTR7B 510 + 149231687 149233542 0 2 63,101, 0,1754, +,+, 99108 LTR ERV1 1723 chr1 149232142 149233327 GGLTR12C 395 - 149232142 149233327 0 2 550,269, 0,916, -,-, 99109 LTR ERVL 1723 chr1 149252929 149253829 GGLTR3B2 563 - 149252929 149253829 0 2 268,265, 0,635, -,-, 99139 LTR ERVL 1723 chr1 149262227 149264871 CR1-G 762 + 149262227 149264871 0 2 2183,461, 0,2183, +,+, 99149 LINE CR1 1723 chr1 149270371 149271122 GGLTR12C 414 + 149270371 149271122 0 2 115,313, 0,438, +,+, 99155 LTR ERVL 1723 chr1 149284433 149285214 CR1-X 260 + 149284433 149285214 0 3 256,310,204, 0,258,577, +,+,+, 99178 LINE CR1 1723 chr1 149285619 149286544 CR1-Y1_Aves 403 + 149285619 149286544 0 2 135,720, 0,205, +,+, 99180 LINE CR1 215 chr1 149290065 149291134 CR1-C4 569 - 149290065 149291134 0 3 234,171,79, 0,255,990, -,-,-, 99188 LINE CR1 1724 chr1 149291150 149293931 ENS1-int 525 + 149291150 149293931 0 4 345,415,131,451, 0,849,1264,2330, +,+,+,+, 99191 LTR ERVL 1724 chr1 149291502 149291877 ENS3-int 256 + 149291502 149291877 0 2 229,112, 0,263, +,+, 99192 LTR ERVL 1724 chr1 149299644 149299829 GGERV21_LTR 541 + 149299644 149299829 0 2 131,54, 0,131, +,+, 99202 LTR ERVL 1724 chr1 149321056 149324432 GGLTR10B 929 + 149321056 149324432 0 3 382,2584,382, 0,407,2994, +,+,+, 99235 LTR ERVK 1724 chr1 149335863 149336841 CR1-Y3 389 + 149335863 149336841 0 3 212,110,401, 0,447,577, +,+,+, 99246 LINE CR1 1724 chr1 149340469 149340739 CR1-Y2_Aves 404 + 149340469 149340739 0 2 105,86, 0,184, +,+, 99252 LINE CR1 1724 chr1 149341106 149341463 CR1-D 801 - 149341106 149341463 0 2 35,322, 0,35, -,-, 99254 LINE CR1 1724 chr1 149347066 149347984 CR1-D 704 + 149347066 149347984 0 2 165,615, 0,303, +,+, 99258 LINE CR1 1724 chr1 149350203 149351135 CR1-Y2_Aves 179 - 149350203 149351135 0 2 686,149, 0,783, -,-, 99263 LINE CR1 1724 chr1 149358151 149360086 CR1-C4 392 - 149358151 149360086 0 3 320,105,1505, 0,325,430, -,-,-, 99272 LINE CR1 1724 chr1 149360084 149362084 CR1-D2 616 - 149360084 149362084 0 2 236,1753, 0,247, -,-, 99273 LINE CR1 1724 chr1 149362081 149363904 CR1-F2 480 - 149362081 149363904 0 2 239,1584, 0,239, -,-, 99274 LINE CR1 1724 chr1 149369195 149369344 GGLTR10C1 922 + 149369195 149369344 0 2 69,80, 0,69, +,+, 99283 LTR ERVK 1724 chr1 149392119 149392813 UCON8 259 - 149392119 149392813 0 2 101,181, 0,513, -,-, 99313 DNA DNA 1724 chr1 149417151 149417226 (TTTTA)n 318 + 149417151 149417226 0 2 51,6, 0,69, +,+, 99363 Simple_repeat Simple_repeat 1724 chr1 149417486 149418076 CR1-C4 463 + 149417486 149418076 0 2 402,158, 0,432, +,+, 99365 LINE CR1 1725 chr1 149444575 149445968 CR1-X2 342 + 149444575 149445968 0 2 101,417, 0,976, +,+, 99397 LINE CR1 1725 chr1 149461730 149463936 CR1-E 647 - 149461730 149463936 0 2 255,1066, 0,1140, -,-, 99412 LINE CR1 1725 chr1 149466092 149467165 GGLTR8A 518 - 149466092 149467165 0 2 382,662, 0,411, -,-, 99418 LTR ERVL 1725 chr1 149474973 149476483 GGERVL18-int 568 - 149474973 149476483 0 2 125,1385, 0,125, -,-, 99429 LTR ERVL 1725 chr1 149488817 149489948 CR1-F2 478 - 149488817 149489948 0 2 466,665, 0,466, -,-, 99452 LINE CR1 1725 chr1 149491644 149493041 CR1-Y2_Aves 319 + 149491644 149493041 0 2 149,432, 0,965, +,+, 99456 LINE CR1 1725 chr1 149498854 149499881 GGLTR5A 517 - 149498854 149499881 0 3 126,391,118, 0,183,909, -,-,-, 99467 LTR ERVL 1725 chr1 149512052 149512797 GGLTR8B 382 + 149512052 149512797 0 2 46,156, 0,589, +,+, 99480 LTR ERVL 1725 chr1 149524278 149526393 CR1-Y 402 - 149524278 149526393 0 2 947,355, 0,1760, -,-, 99495 LINE CR1 1725 chr1 149530167 149533180 GGERVL-B-int 790 - 149530167 149533180 0 3 574,370,1706, 0,574,1307, -,-,-, 99500 LTR ERVL 1725 chr1 149546853 149548865 CR1-Y2_Aves 343 + 149546853 149548865 0 3 60,324,149, 0,1237,1863, +,+,+, 99518 LINE CR1 1726 chr1 149562431 149563810 CR1-D 602 - 149562431 149563810 0 2 251,1128, 0,251, -,-, 99542 LINE CR1 1726 chr1 149571039 149573342 CR1-C4 575 - 149571039 149573342 0 3 575,386,319, 0,1456,1984, -,-,-, 99547 LINE CR1 1726 chr1 149600911 149603922 CR1-F 478 + 149600911 149603922 0 3 1917,225,251, 0,2429,2760, +,+,+, 99594 LINE CR1 1726 chr1 149605777 149607286 CR1-Y1_Aves 435 - 149605777 149607286 0 2 577,132, 0,1377, -,-, 99598 LINE CR1 1726 chr1 149610903 149611390 CR1-C4 316 + 149610903 149611390 0 2 303,143, 0,344, +,+, 99606 LINE CR1 1726 chr1 149632746 149633602 CR1-H 844 + 149632746 149633602 0 2 230,135, 0,721, +,+, 99643 LINE CR1 1726 chr1 149634306 149636635 CR1-C 706 - 149634306 149636635 0 2 1866,463, 0,1866, -,-, 99646 LINE CR1 1726 chr1 149644620 149645376 CR1-C 789 - 149644620 149645376 0 2 459,297, 0,459, -,-, 99657 LINE CR1 1726 chr1 149655265 149656448 CR1-Y2_Aves 201 + 149655265 149656448 0 2 400,336, 0,847, +,+, 99674 LINE CR1 1726 chr1 149680687 149680862 CR1-Y1_Aves 492 + 149680687 149680862 0 2 73,77, 0,98, +,+, 99704 LINE CR1 1726 chr1 149682127 149683090 CR1-E 799 - 149682127 149683090 0 2 66,117, 0,846, -,-, 99708 LINE CR1 1727 chr1 149690385 149691536 Char12Mar1_GG 507 - 149690385 149691536 0 3 37,131,429, 0,85,722, -,-,-, 99717 DNA hAT-Charlie 1727 chr1 149693270 149694970 CR1-Y1_Aves 377 - 149693270 149694970 0 2 830,325, 0,1375, -,-, 99721 LINE CR1 1727 chr1 149696902 149696973 (AATAA)n 326 + 149696902 149696973 0 2 19,33, 0,38, +,+, 99727 Simple_repeat Simple_repeat 1727 chr1 149715030 149716312 CR1-C4 553 + 149715030 149716312 0 2 320,962, 0,320, +,+, 99756 LINE CR1 1727 chr1 149717258 149719137 GGLTR9 595 - 149717258 149719137 0 2 232,152, 0,1727, -,-, 99757 LTR ERVL 1727 chr1 149720887 149721315 CR1-C 714 - 149720887 149721315 0 2 261,167, 0,261, -,-, 99761 LINE CR1 1727 chr1 149722985 149724352 GGLTR3E1 729 - 149722985 149724352 0 2 304,242, 0,1125, -,-, 99766 LTR ERVL 1727 chr1 149732160 149734430 CR1-D2 491 - 149732160 149734430 0 2 384,195, 0,2075, -,-, 99775 LINE CR1 1727 chr1 149739690 149740161 CR1-Y2_Aves 298 - 149739690 149740161 0 2 148,211, 0,260, -,-, 99782 LINE CR1 1727 chr1 149747395 149748049 CR1-X2 244 - 149747395 149748049 0 3 133,270,150, 0,187,504, -,-,-, 99791 LINE CR1 1727 chr1 149755107 149756362 Char12Mar1_GG 493 - 149755107 149756362 0 2 438,121, 0,1134, -,-, 99802 DNA hAT-Charlie 1727 chr1 149758281 149759327 GGLTR8B 275 - 149758281 149759327 0 2 339,99, 0,947, -,-, 99810 LTR ERVL 1727 chr1 149766705 149769571 CR1-F2 133 + 149766705 149769571 0 2 2116,723, 0,2143, +,+, 99824 LINE CR1 1727 chr1 149782532 149783474 Char12Mar1_GG 525 - 149782532 149783474 0 2 270,137, 0,805, -,-, 99845 DNA hAT-Charlie 1727 chr1 149789126 149796554 CR1-C2 673 + 149789126 149796554 0 2 317,240, 0,7188, +,+, 99864 LINE CR1 1727 chr1 149789446 149796314 GGLTR3B3 721 - 149789446 149796314 0 2 374,137, 0,6731, -,-, 99866 LTR ERVL 1727 chr1 149789820 149795609 GGERVL-B-int 821 + 149789820 149795609 0 3 469,934,4321, 0,471,1468, +,+,+, 99867 LTR ERVL 1727 chr1 149795609 149796177 GGLTR3F2 685 + 149795609 149796177 0 3 36,231,269, 0,36,299, +,+,+, 99869 LTR ERVL 1727 chr1 149806091 149807292 CR1-C4 430 + 149806091 149807292 0 3 152,295,172, 0,183,1029, +,+,+, 99893 LINE CR1 1728 chr1 149819348 149824176 CR1-F 894 - 149819348 149824176 0 2 3657,873, 0,3955, -,-, 99911 LINE CR1 1728 chr1 149851851 149853260 Charlie12_GG 500 - 149851851 149853260 0 2 196,694, 0,715, -,-, 99955 DNA hAT-Charlie 1728 chr1 149870484 149871466 CR1-X2 485 + 149870484 149871466 0 2 216,766, 0,216, +,+, 99987 LINE CR1 1728 chr1 149872894 149873933 CR1-F2 162 + 149872894 149873933 0 2 369,650, 0,389, +,+, 99990 LINE CR1 1728 chr1 149874283 149876270 TguLTR5e 238 + 149874283 149876270 0 2 411,118, 0,1869, +,+, 99991 LTR ERVL 1728 chr1 149894153 149895569 CR1-Y 361 + 149894153 149895569 0 2 524,392, 0,1024, +,+, 100019 LINE CR1 1728 chr1 149895567 149897547 CR1-Y4 472 + 149895567 149897547 0 2 128,375, 0,1605, +,+, 100021 LINE CR1 1728 chr1 149895693 149897151 CR1-D 662 + 149895693 149897151 0 2 514,933, 0,525, +,+, 100022 LINE CR1 1728 chr1 149901285 149903158 CR1-Y2_Aves 357 + 149901285 149903158 0 3 257,363,675, 0,830,1198, +,+,+, 100028 LINE CR1 1728 chr1 149904899 149906039 CR1-G 700 + 149904899 149906039 0 2 97,1043, 0,97, +,+, 100032 LINE CR1 1728 chr1 149907289 149909235 CR1-X2 375 - 149907289 149909235 0 2 332,186, 0,1760, -,-, 100035 LINE CR1 1728 chr1 149916760 149923487 GGLTR3A 861 + 149916760 149923487 0 4 527,5587,45,524, 0,527,6158,6203, +,+,+,+, 100050 LTR ERVL 1728 chr1 149926354 149931627 CR1-Y2_Aves 296 + 149926354 149931627 0 3 96,257,173, 0,141,5100, +,+,+, 100055 LINE CR1 1728 chr1 149926752 149931454 GGLTR3G2 684 + 149926752 149931454 0 2 417,187, 0,4515, +,+, 100057 LTR ERVL 1728 chr1 149927332 149930871 GGLTR3A 789 + 149927332 149930871 0 2 527,3012, 0,527, +,+, 100059 LTR ERVL 1728 chr1 149931622 149935657 CR1-Y4 517 + 149931622 149935657 0 3 37,451,423, 0,3161,3612, +,+,+, 100062 LINE CR1 1728 chr1 149936664 149939198 EAVHP_I-int 974 - 149936664 149939198 0 4 313,1447,168,313, 0,315,2051,2221, -,-,-,-, 100066 LTR ERVK 1728 chr1 149940939 149944011 CR1-B 901 + 149940939 149944011 0 2 2006,720, 0,2352, +,+, 100071 LINE CR1 1728 chr1 149945674 149946346 GGLTR5A 423 + 149945674 149946346 0 3 419,90,102, 0,449,570, +,+,+, 100074 LTR ERVL 1729 chr1 149954106 149954603 CR1-D2 526 - 149954106 149954603 0 2 120,377, 0,120, -,-, 100088 LINE CR1 1729 chr1 149972693 149976124 CR1-G 775 + 149972693 149976124 0 2 1540,1891, 0,1540, +,+, 100116 LINE CR1 1729 chr1 149979323 149980813 GGLTR8A 120 - 149979323 149980813 0 2 164,588, 0,902, -,-, 100119 LTR ERVL 1729 chr1 149980820 149981825 CR1-Y2_Aves 357 + 149980820 149981825 0 2 277,338, 0,667, +,+, 100121 LINE CR1 1729 chr1 149988599 149994207 GGERVL-B-int 838 + 149988599 149994207 0 4 34,160,4793,523, 0,34,292,5085, +,+,+,+, 100139 LTR ERVL 1729 chr1 149994207 149995660 GGLTR3B4 711 + 149994207 149995660 0 3 461,385,112, 0,461,1341, +,+,+, 100141 LTR ERVL 1729 chr1 150004766 150006499 CR1-C4 454 - 150004766 150006499 0 3 85,544,260, 0,929,1473, -,-,-, 100159 LINE CR1 1729 chr1 150010300 150010640 GGERV10_LTR 532 - 150010300 150010640 0 2 159,86, 0,254, -,-, 100171 LTR ERVL 1729 chr1 150016341 150018798 CR1-X 283 + 150016341 150018798 0 3 523,300,171, 0,900,2286, +,+,+, 100179 LINE CR1 1729 chr1 150062421 150064937 CR1-Y2_Aves 251 - 150062421 150064937 0 5 179,60,507,157,133, 0,308,478,1703,2383, -,-,-,-,-, 100248 LINE CR1 1730 chr1 150079187 150080985 CR1-E 569 + 150079187 150080985 0 2 774,409, 0,1389, +,+, 100266 LINE CR1 1730 chr1 150104518 150106642 CR1-Y 737 - 150104518 150106642 0 2 1382,43, 0,2081, -,-, 100307 LINE CR1 1730 chr1 150105933 150106599 GGERV10_LTR 450 + 150105933 150106599 0 2 19,142, 0,524, +,+, 100309 LTR ERVL 1730 chr1 150110649 150111903 CR1-D2 737 - 150110649 150111903 0 2 115,249, 0,1005, -,-, 100314 LINE CR1 1730 chr1 150110764 150111654 GGLTR12C 560 - 150110764 150111654 0 2 243,647, 0,243, -,-, 100315 LTR ERVL 1730 chr1 150117914 150118509 CR1-C3 676 - 150117914 150118509 0 2 463,132, 0,463, -,-, 100323 LINE CR1 1730 chr1 150119370 150120284 CR1-G 410 - 150119370 150120284 0 3 496,137,267, 0,510,647, -,-,-, 100327 LINE CR1 1730 chr1 150133450 150134708 GGERVL-C-int 778 - 150133450 150134708 0 2 496,762, 0,496, -,-, 100354 LTR ERVL 1730 chr1 150153586 150155241 CR1-Y1_Aves 517 - 150153586 150155241 0 3 49,556,252, 0,61,1403, -,-,-, 100385 LINE CR1 1730 chr1 150154204 150154864 ENS1B-LTR 223 - 150154204 150154864 0 2 418,209, 0,451, -,-, 100386 LTR ERVL 1730 chr1 150160245 150166428 GGERVK1-int 975 - 150160245 150166428 0 4 241,447,5254,241, 0,241,688,5942, -,-,-,-, 100391 LTR ERVK 1730 chr1 150167611 150171153 GGERVL-A-int 719 + 150167611 150171153 0 2 274,3267, 0,275, +,+, 100393 LTR ERVL 1731 chr1 150215692 150216036 Chompy-7_Croc 341 - 150215692 150216036 0 2 107,56, 0,288, -,-, 100456 DNA PIF-Harbinger 1731 chr1 150216720 150217359 CR1-Y4 588 - 150216720 150217359 0 2 324,182, 0,457, -,-, 100458 LINE CR1 1731 chr1 150221959 150222989 CR1-Y2_Aves 88 + 150221959 150222989 0 2 385,472, 0,558, +,+, 100470 LINE CR1 1731 chr1 150238720 150240389 CR1-C4 449 - 150238720 150240389 0 2 252,237, 0,1432, -,-, 100497 LINE CR1 1731 chr1 150241398 150242829 CR1-H 884 + 150241398 150242829 0 2 698,134, 0,1297, +,+, 100504 LINE CR1 1731 chr1 150267930 150268800 CR1-G 242 + 150267930 150268800 0 2 256,491, 0,379, +,+, 100537 LINE CR1 1731 chr1 150268796 150269501 CR1-Y 794 + 150268796 150269501 0 2 262,443, 0,262, +,+, 100539 LINE CR1 1731 chr1 150291810 150292203 CR1-E 479 - 150291810 150292203 0 2 119,269, 0,124, -,-, 100571 LINE CR1 1731 chr1 150292219 150293584 GGLTR8A 67 + 150292219 150293584 0 2 186,409, 0,956, +,+, 100572 LTR ERVL 1731 chr1 150300937 150301226 CR1-C2 784 + 150300937 150301226 0 2 111,178, 0,111, +,+, 100588 LINE CR1 1731 chr1 150326410 150327151 CR1-Y1_Aves 345 - 150326410 150327151 0 3 187,175,328, 0,238,413, -,-,-, 100622 LINE CR1 1731 chr1 150327844 150332928 CR1-C 808 - 150327844 150332928 0 2 3603,957, 0,4127, -,-, 100627 LINE CR1 1731 chr1 150332955 150333394 GGLTR3D 519 + 150332955 150333394 0 2 324,83, 0,356, +,+, 100629 LTR ERVL 1732 chr1 150356151 150356568 GGLTR8B 351 + 150356151 150356568 0 2 56,319, 0,98, +,+, 100661 LTR ERVL 1732 chr1 150366576 150367311 CR1-F 617 - 150366576 150367311 0 2 327,313, 0,422, -,-, 100681 LINE CR1 1732 chr1 150371993 150372119 (A)n 907 + 150371993 150372119 0 2 47,23, 0,103, +,+, 100693 Simple_repeat Simple_repeat 1732 chr1 150385305 150386256 CR1-E 393 - 150385305 150386256 0 2 546,381, 0,570, -,-, 100706 LINE CR1 1732 chr1 150403685 150403790 A-rich 616 + 150403685 150403790 0 2 57,28, 0,77, +,+, 100742 Low_complexity Low_complexity 1732 chr1 150421812 150424879 GGERVL18-int 731 - 150421812 150424879 0 2 342,2725, 0,342, -,-, 100761 LTR ERVL 1732 chr1 150435200 150446401 CR1-C2 758 - 150435200 150446401 0 2 981,726, 0,10475, -,-, 100774 LINE CR1 1732 chr1 150436181 150438716 GGERVL-C-int 676 - 150436181 150438716 0 2 568,1967, 0,568, -,-, 100775 LTR ERVL 1732 chr1 150441685 150445675 GGERVL-A-int 649 - 150441685 150445675 0 3 1603,1805,582, 0,1603,3408, -,-,-, 100777 LTR ERVL 1733 chr1 150478007 150479492 Char12Mar1_GG 642 - 150478007 150479492 0 2 259,305, 0,1180, -,-, 100816 DNA hAT-Charlie 1733 chr1 150478266 150479187 GGLTR12C 617 - 150478266 150479187 0 2 215,686, 0,235, -,-, 100817 LTR ERVL 1733 chr1 150487118 150489644 GGERVL-C-int 778 - 150487118 150489644 0 2 506,2020, 0,506, -,-, 100833 LTR ERVL 1733 chr1 150492929 150495738 GGERV28_I-int 243 - 150492929 150495738 0 4 62,132,552,623, 0,208,624,2186, -,-,-,-, 100840 LTR ERVK 1733 chr1 150510996 150511641 CR1-E 414 - 150510996 150511641 0 2 325,302, 0,343, -,-, 100867 LINE CR1 1733 chr1 150512449 150512891 CR1-F0 407 - 150512449 150512891 0 2 147,280, 0,162, -,-, 100869 LINE CR1 1733 chr1 150519820 150521381 CR1-H 724 - 150519820 150521381 0 3 258,135,674, 0,752,887, -,-,-, 100885 LINE CR1 1733 chr1 150522012 150525296 GGLTR8B 331 + 150522012 150525296 0 2 232,232, 0,3052, +,+, 100889 LTR ERVL 1733 chr1 150527864 150530664 GGLTR7A 738 + 150527864 150530664 0 4 581,650,1339,65, 0,581,1396,2735, +,+,+,+, 100895 LTR ERV1 1733 chr1 150530726 150534621 CR1-B 861 + 150530726 150534621 0 2 884,2130, 0,1765, +,+, 100896 LINE CR1 1733 chr1 150543926 150544774 Charlie12_GG 504 + 150543926 150544774 0 2 705,109, 0,739, +,+, 100914 DNA hAT-Charlie 1733 chr1 150554314 150555138 Mariner1_GG 553 - 150554314 150555138 0 2 110,699, 0,125, -,-, 100922 DNA TcMar-Mariner 1733 chr1 150564916 150565480 GGLTR3G1 504 - 150564916 150565480 0 2 127,437, 0,127, -,-, 100938 LTR ERVL 1733 chr1 150576506 150577138 Char12Mar1_GG 470 - 150576506 150577138 0 2 350,255, 0,377, -,-, 100958 DNA hAT-Charlie 216 chr1 150600445 150603119 GGLTR3E1 821 - 150600445 150603119 0 2 447,134, 0,2540, -,-, 100992 LTR ERVL 1734 chr1 150608957 150609332 GGLTR8B 288 - 150608957 150609332 0 2 209,91, 0,284, -,-, 101002 LTR ERVL 1734 chr1 150610243 150613254 CR1-D2 633 - 150610243 150613254 0 3 676,335,204, 0,676,2807, -,-,-, 101004 LINE CR1 1734 chr1 150623920 150625104 GGLTR8B 392 - 150623920 150625104 0 2 894,85, 0,1099, -,-, 101019 LTR ERVL 1734 chr1 150626414 150627486 CR1-F 627 + 150626414 150627486 0 2 305,261, 0,811, +,+, 101022 LINE CR1 1734 chr1 150644892 150649409 GGERVL18-int 633 - 150644892 150649409 0 3 303,2953,1257, 0,303,3260, -,-,-, 101044 LTR ERVL 1734 chr1 150654642 150655684 CR1-F2 543 - 150654642 150655684 0 2 215,127, 0,915, -,-, 101053 LINE CR1 1734 chr1 150667055 150667377 GGERV10_LTR 681 - 150667055 150667377 0 2 157,63, 0,259, -,-, 101077 LTR ERVL 1734 chr1 150668765 150671955 GGERV30_LTR 696 + 150668765 150671955 0 2 2892,298, 0,2892, +,+, 101079 LTR ERVL 1734 chr1 150694045 150695659 GGLTR5A 411 - 150694045 150695659 0 3 126,232,58, 0,165,1556, -,-,-, 101107 LTR ERVL 1734 chr1 150698680 150699074 CR1-Y2_Aves 358 + 150698680 150699074 0 2 76,305, 0,89, +,+, 101113 LINE CR1 1734 chr1 150701234 150703389 CR1-C4 600 + 150701234 150703389 0 2 234,1921, 0,234, +,+, 101115 LINE CR1 1734 chr1 150707385 150707780 GGLTR8A 446 - 150707385 150707780 0 2 281,88, 0,307, -,-, 101121 LTR ERVL 1734 chr1 150708111 150708913 GGLTR8A 116 + 150708111 150708913 0 2 416,278, 0,524, +,+, 101122 LTR ERVL 1734 chr1 150716365 150717210 CR1-C3 469 + 150716365 150717210 0 3 66,508,56, 0,272,789, +,+,+, 101136 LINE CR1 1734 chr1 150723950 150724752 GGLTR8A 116 + 150723950 150724752 0 2 416,278, 0,524, +,+, 101146 LTR ERVL 1735 chr1 150737000 150737434 GGLTR5A 380 + 150737000 150737434 0 2 177,255, 0,179, +,+, 101168 LTR ERVL 1735 chr1 150757564 150757842 Mariner1_GG 660 - 150757564 150757842 0 2 88,158, 0,120, -,-, 101204 DNA TcMar-Mariner 1735 chr1 150760625 150761133 CR1-C2 349 - 150760625 150761133 0 2 63,396, 0,112, -,-, 101209 LINE CR1 1735 chr1 150769312 150770771 CR1-C4 464 + 150769312 150770771 0 2 1117,342, 0,1117, +,+, 101228 LINE CR1 1735 chr1 150777886 150779364 CR1-F 897 + 150777886 150779364 0 2 947,497, 0,981, +,+, 101234 LINE CR1 1735 chr1 150784358 150785297 CR1-F2 837 + 150784358 150785297 0 2 356,560, 0,379, +,+, 101241 LINE CR1 1735 chr1 150785340 150787715 CR1-C4 650 + 150785340 150787715 0 2 299,241, 0,2134, +,+, 101242 LINE CR1 1735 chr1 150791711 150792482 CR1-Y4 558 - 150791711 150792482 0 2 510,261, 0,510, -,-, 101249 LINE CR1 1735 chr1 150795652 150796446 CR1-F2 607 + 150795652 150796446 0 2 261,533, 0,261, +,+, 101254 LINE CR1 1735 chr1 150842032 150843281 CR1-E 751 + 150842032 150843281 0 2 1144,105, 0,1144, +,+, 101321 LINE CR1 1735 chr1 150851250 150854427 CR1-X2 395 - 150851250 150854427 0 2 134,530, 0,2647, -,-, 101333 LINE CR1 1735 chr1 150851383 150852813 CR1-C3 586 - 150851383 150852813 0 2 418,1009, 0,421, -,-, 101334 LINE CR1 1735 chr1 150856980 150857737 GGLTR5A 255 - 150856980 150857737 0 3 140,37,411, 0,249,346, -,-,-, 101337 LTR ERVL 1736 chr1 150864096 150864687 GGLTR10C-int 244 + 150864096 150864687 0 2 376,215, 0,376, +,+, 101346 LTR ERVK 1736 chr1 150872494 150874341 CR1-C 856 + 150872494 150874341 0 2 1444,403, 0,1444, +,+, 101356 LINE CR1 1736 chr1 150883465 150884091 GGLTR3B4 729 + 150883465 150884091 0 2 112,394, 0,232, +,+, 101370 LTR ERVL 1736 chr1 150888426 150889931 Char12Mar1_GG 517 - 150888426 150889931 0 2 494,911, 0,594, -,-, 101381 DNA hAT-Charlie 1736 chr1 150890245 150893719 CR1-C2 618 + 150890245 150893719 0 2 147,755, 0,2719, +,+, 101385 LINE CR1 1736 chr1 150890392 150892968 GGLTR3A 716 + 150890392 150892968 0 2 524,2052, 0,524, +,+, 101386 LTR ERVL 1736 chr1 150893735 150894641 GGLTR12C 649 - 150893735 150894641 0 2 214,672, 0,234, -,-, 101387 LTR ERVL 1736 chr1 150900140 150900512 GGLTR5A 387 - 150900140 150900512 0 2 83,252, 0,120, -,-, 101402 LTR ERVL 1736 chr1 150907690 150908233 GGLTR3B1 840 - 150907690 150908233 0 2 51,492, 0,51, -,-, 101413 LTR ERVL 1736 chr1 150914535 150916014 GGLTR8B 383 - 150914535 150916014 0 2 1066,77, 0,1402, -,-, 101419 LTR ERVL 1736 chr1 150926859 150927506 GGLTR5B 138 + 150926859 150927506 0 2 406,207, 0,440, +,+, 101438 LTR ERVL 1736 chr1 150946482 150947385 CR1-Y4 603 + 150946482 150947385 0 2 60,649, 0,254, +,+, 101458 LINE CR1 1736 chr1 150979416 150980564 CR1-Y4 447 + 150979416 150980564 0 2 704,444, 0,704, +,+, 101500 LINE CR1 3 chr1 150994732 150995540 CR1-Y2 577 - 150994732 150995540 0 2 62,495, 0,313, -,-, 101521 LINE CR1 1737 chr1 151039659 151042483 CR1-C 805 + 151039659 151042483 0 2 480,1516, 0,1308, +,+, 101580 LINE CR1 1737 chr1 151045113 151046105 CR1-D2 520 + 151045113 151046105 0 2 351,641, 0,351, +,+, 101587 LINE CR1 1737 chr1 151055660 151056246 GGLTR11 614 + 151055660 151056246 0 2 62,482, 0,104, +,+, 101603 LTR ERV1 1737 chr1 151068048 151070344 CR1-X 167 - 151068048 151070344 0 2 193,459, 0,1837, -,-, 101622 LINE CR1 1737 chr1 151073130 151075090 CR1-Y2_Aves 97 - 151073130 151075090 0 3 288,369,246, 0,902,1714, -,-,-, 101628 LINE CR1 1737 chr1 151088993 151089343 GGLTR5A 486 - 151088993 151089343 0 2 48,275, 0,75, -,-, 101649 LTR ERVL 1737 chr1 151091653 151093291 CR1-X2 452 + 151091653 151093291 0 3 890,75,149, 0,946,1489, +,+,+, 101652 LINE CR1 1737 chr1 151095126 151096631 CR1-D 705 + 151095126 151096631 0 2 185,559, 0,946, +,+, 101658 LINE CR1 1737 chr1 151098955 151099522 CR1-Y4 260 + 151098955 151099522 0 2 208,359, 0,208, +,+, 101665 LINE CR1 1737 chr1 151102118 151102281 Charlie12_GG 692 - 151102118 151102281 0 2 83,79, 0,84, -,-, 101670 DNA hAT-Charlie 1737 chr1 151107499 151107624 GGLTR3B1 904 + 151107499 151107624 0 2 99,26, 0,99, +,+, 101674 LTR ERVL 1737 chr1 151110717 151111658 CR1-C2 684 - 151110717 151111658 0 2 129,812, 0,129, -,-, 101677 LINE CR1 1737 chr1 151112440 151116044 CR1-F2 597 + 151112440 151116044 0 3 404,672,1046, 0,1335,2558, +,+,+, 101679 LINE CR1 1737 chr1 151116392 151117202 GGLTR8A 432 - 151116392 151117202 0 2 282,524, 0,286, -,-, 101682 LTR ERVL 1737 chr1 151121999 151124840 CR1-F2 769 - 151121999 151124840 0 3 91,39,498, 0,2302,2343, -,-,-, 101688 LINE CR1 217 chr1 151125302 151128334 CR1-Y2 388 + 151125302 151128334 0 2 652,83, 0,2949, +,+, 101691 LINE CR1 217 chr1 151125954 151127331 Char12Mar1_GG 581 - 151125954 151127331 0 2 489,675, 0,702, -,-, 101692 DNA hAT-Charlie 1738 chr1 151128043 151128264 CR1-C3 338 + 151128043 151128264 0 2 148,46, 0,175, +,+, 101695 LINE CR1 1738 chr1 151139866 151146408 CR1-C3 665 - 151139866 151146408 0 2 2023,995, 0,5547, -,-, 101713 LINE CR1 1738 chr1 151141888 151144865 CR1-H 735 - 151141888 151144865 0 2 1425,1552, 0,1425, -,-, 101714 LINE CR1 1738 chr1 151161236 151162530 CR1-D2 581 + 151161236 151162530 0 2 690,604, 0,690, +,+, 101735 LINE CR1 1738 chr1 151167427 151167750 GGLTR8A 601 + 151167427 151167750 0 2 91,181, 0,142, +,+, 101743 LTR ERVL 1738 chr1 151192492 151195129 CR1-C4 505 - 151192492 151195129 0 3 325,1604,202, 0,796,2435, -,-,-, 101786 LINE CR1 1738 chr1 151197994 151198172 A-rich 421 + 151197994 151198172 0 2 64,66, 0,112, +,+, 101791 Low_complexity Low_complexity 1738 chr1 151252479 151252637 CR1-X 342 + 151252479 151252637 0 2 91,67, 0,91, +,+, 101869 LINE CR1 1739 chr1 151284148 151285429 CR1-C4 520 - 151284148 151285429 0 2 382,669, 0,612, -,-, 101922 LINE CR1 1739 chr1 151285442 151285816 CR1-Y1_Aves 528 - 151285442 151285816 0 2 218,147, 0,227, -,-, 101925 LINE CR1 1739 chr1 151307384 151308169 GGERV30_LTR 348 + 151307384 151308169 0 2 136,119, 0,666, +,+, 101955 LTR ERVL 1739 chr1 151309867 151310423 CR1-H 757 + 151309867 151310423 0 2 306,250, 0,306, +,+, 101960 LINE CR1 1739 chr1 151346691 151347970 CR1-F2 491 + 151346691 151347970 0 2 422,240, 0,1039, +,+, 102009 LINE CR1 1739 chr1 151347132 151347722 GGLTR11 574 - 151347132 151347722 0 2 488,63, 0,527, -,-, 102010 LTR ERV1 1739 chr1 151360356 151361552 CR1-X1 357 - 151360356 151361552 0 2 191,1005, 0,191, -,-, 102025 LINE CR1 1740 chr1 151400169 151401668 GGLTR3E1 818 - 151400169 151401668 0 2 334,199, 0,1300, -,-, 102078 LTR ERVL 1740 chr1 151404425 151407764 CR1-X2 473 - 151404425 151407764 0 2 337,2302, 0,1037, -,-, 102084 LINE CR1 1740 chr1 151424315 151429450 CR1-G 827 - 151424315 151429450 0 3 1380,288,1662, 0,1380,3473, -,-,-, 102106 LINE CR1 1740 chr1 151425979 151427790 CR1-H 787 + 151425979 151427790 0 2 932,329, 0,1482, +,+, 102107 LINE CR1 1740 chr1 151431263 151432028 GGLTR3C2 481 - 151431263 151432028 0 3 122,115,322, 0,157,443, -,-,-, 102113 LTR ERVL 1740 chr1 151435496 151436423 Charlie12_GG 346 + 151435496 151436423 0 2 587,314, 0,613, +,+, 102123 DNA hAT-Charlie 1740 chr1 151459825 151459927 (TTTC)n 158 + 151459825 151459927 0 2 7,12, 0,90, +,+, 102157 Simple_repeat Simple_repeat 1740 chr1 151480956 151481345 GGERVL18-LTR 827 - 151480956 151481345 0 2 139,209, 0,180, -,-, 102198 LTR ERVL 1740 chr1 151500021 151500824 CR1-Y4 580 - 151500021 151500824 0 2 400,401, 0,402, -,-, 102225 LINE CR1 1740 chr1 151501995 151504164 CR1-D 491 + 151501995 151504164 0 2 962,490, 0,1679, +,+, 102228 LINE CR1 1740 chr1 151505245 151505659 GGLTR5B 200 + 151505245 151505659 0 2 272,111, 0,303, +,+, 102237 LTR ERVL 1741 chr1 151527244 151528067 GGERVL-A-int 607 + 151527244 151528067 0 2 486,337, 0,486, +,+, 102260 LTR ERVL 1741 chr1 151532019 151535367 CR1-C 797 + 151532019 151535367 0 2 54,2989, 0,359, +,+, 102270 LINE CR1 1741 chr1 151532073 151532382 GGERV10_LTR 790 - 151532073 151532382 0 2 125,62, 0,247, -,-, 102271 LTR ERVL 1741 chr1 151539262 151542657 GGLTR8B 266 + 151539262 151542657 0 2 408,192, 0,3203, +,+, 102276 LTR ERVL 1741 chr1 151542977 151546325 CR1-C 797 - 151542977 151546325 0 2 2989,54, 0,3294, -,-, 102280 LINE CR1 1741 chr1 151545962 151546271 GGERV10_LTR 790 + 151545962 151546271 0 2 62,125, 0,184, +,+, 102281 LTR ERVL 1741 chr1 151546862 151547293 CR1-C 746 - 151546862 151547293 0 2 302,129, 0,302, -,-, 102284 LINE CR1 1741 chr1 151568729 151569618 CR1-Y2_Aves 203 - 151568729 151569618 0 2 109,474, 0,415, -,-, 102324 LINE CR1 1741 chr1 151579457 151579575 (CTCT)n 154 + 151579457 151579575 0 2 59,13, 0,105, +,+, 102339 Simple_repeat Simple_repeat 1741 chr1 151602216 151605800 CR1-B2 782 + 151602216 151605800 0 2 109,596, 0,2988, +,+, 102372 LINE CR1 1741 chr1 151602325 151605204 GGLTR3B1 778 + 151602325 151605204 0 3 62,383,72, 0,841,2807, +,+,+, 102373 LTR ERVL 1741 chr1 151613220 151613944 CR1-E 166 + 151613220 151613944 0 2 213,131, 0,593, +,+, 102382 LINE CR1 1741 chr1 151621675 151621796 (TA)n 667 + 151621675 151621796 0 2 48,56, 0,65, +,+, 102395 Simple_repeat Simple_repeat 1741 chr1 151631104 151631993 CR1-C4 510 - 151631104 151631993 0 2 664,225, 0,664, -,-, 102410 LINE CR1 1741 chr1 151642427 151647085 CR1-H 587 + 151642427 151647085 0 2 260,4398, 0,260, +,+, 102424 LINE CR1 1741 chr1 151647078 151647982 CR1-C 851 + 151647078 151647982 0 2 103,801, 0,103, +,+, 102425 LINE CR1 217 chr1 151649715 151652809 CR1-D 416 - 151649715 151652809 0 2 1425,863, 0,2231, -,-, 102430 LINE CR1 1742 chr1 151654903 151655761 CR1-Y4 561 - 151654903 151655761 0 2 97,212, 0,646, -,-, 102434 LINE CR1 1742 chr1 151655869 151658033 CR1-X2 206 + 151655869 151658033 0 2 401,810, 0,1354, +,+, 102437 LINE CR1 1742 chr1 151668541 151668593 (AATACT)n 640 + 151668541 151668593 0 2 11,18, 0,34, +,+, 102451 Simple_repeat Simple_repeat 1742 chr1 151678379 151678928 CR1-Y4 465 + 151678379 151678928 0 2 157,298, 0,251, +,+, 102467 LINE CR1 1742 chr1 151679194 151679265 (ATTTGTT)n 386 + 151679194 151679265 0 2 18,22, 0,49, +,+, 102469 Simple_repeat Simple_repeat 1742 chr1 151681058 151682562 CR1-G 719 - 151681058 151682562 0 3 211,799,126, 0,579,1378, -,-,-, 102472 LINE CR1 1742 chr1 151704263 151704886 CR1-C4 505 + 151704263 151704886 0 2 268,355, 0,268, +,+, 102510 LINE CR1 1742 chr1 151704531 151705168 CR1-B2 347 + 151704531 151705168 0 2 50,287, 0,350, +,+, 102511 LINE CR1 1742 chr1 151717047 151718947 CR1-Y3 480 - 151717047 151718947 0 2 128,1772, 0,128, -,-, 102530 LINE CR1 1742 chr1 151719761 151721005 GGERVL-A-int 875 - 151719761 151721005 0 2 493,751, 0,493, -,-, 102531 LTR ERVL 1742 chr1 151721636 151722819 CR1-D2 624 + 151721636 151722819 0 2 410,139, 0,1044, +,+, 102534 LINE CR1 1742 chr1 151729175 151729584 TguLTR5e 213 - 151729175 151729584 0 2 141,191, 0,218, -,-, 102545 LTR ERVL 1742 chr1 151748031 151748846 CR1-D2 581 + 151748031 151748846 0 2 612,102, 0,713, +,+, 102580 LINE CR1 1742 chr1 151751594 151752067 CR1-Y4 512 - 151751594 151752067 0 2 292,176, 0,297, -,-, 102585 LINE CR1 1742 chr1 151753724 151754609 GGLTR12C 610 - 151753724 151754609 0 2 211,655, 0,230, -,-, 102590 LTR ERVL 1742 chr1 151767216 151769411 CR1-Y1_Aves 433 + 151767216 151769411 0 2 235,210, 0,1985, +,+, 102607 LINE CR1 1742 chr1 151767447 151769203 CR1-H2 799 - 151767447 151769203 0 2 52,827, 0,929, -,-, 102608 LINE CR1 1743 chr1 151785922 151786762 CR1-X2 414 + 151785922 151786762 0 2 83,757, 0,83, +,+, 102635 LINE CR1 1743 chr1 151789505 151791384 CR1-Y4 544 + 151789505 151791384 0 2 431,1094, 0,785, +,+, 102641 LINE CR1 1743 chr1 151795335 151798534 CR1-E 705 - 151795335 151798534 0 2 109,355, 0,2844, -,-, 102650 LINE CR1 1743 chr1 151799040 151799609 Mariner1b_GG 578 + 151799040 151799609 0 2 497,45, 0,524, +,+, 102653 DNA TcMar-Mariner 1743 chr1 151800147 151800710 GGLTR5A 248 + 151800147 151800710 0 2 343,203, 0,360, +,+, 102657 LTR ERVL 1743 chr1 151811693 151812790 GGERVL18-LTR 775 + 151811693 151812790 0 2 1011,84, 0,1013, +,+, 102684 LTR ERVL 1743 chr1 151822469 151823386 Char12Mar1_GG 532 - 151822469 151823386 0 2 568,349, 0,568, -,-, 102699 DNA hAT-Charlie 1743 chr1 151823396 151824176 Char12Mar1_GG 761 - 151823396 151824176 0 2 94,27, 0,753, -,-, 102700 DNA hAT-Charlie 1743 chr1 151828375 151829729 CR1-C3 277 - 151828375 151829729 0 2 193,390, 0,964, -,-, 102709 LINE CR1 1743 chr1 151838981 151839858 CR1-C4 470 + 151838981 151839858 0 2 178,378, 0,499, +,+, 102724 LINE CR1 1743 chr1 151849148 151849805 CR1-D2 368 + 151849148 151849805 0 2 196,348, 0,309, +,+, 102744 LINE CR1 1743 chr1 151861783 151862678 CR1-F2 500 - 151861783 151862678 0 2 60,827, 0,68, -,-, 102761 LINE CR1 1743 chr1 151875513 151875978 CR1-Y2_Aves 65 - 151875513 151875978 0 2 240,200, 0,265, -,-, 102777 LINE CR1 1743 chr1 151880435 151880806 CR1-Y4 515 + 151880435 151880806 0 2 324,47, 0,324, +,+, 102790 LINE CR1 1743 chr1 151881157 151882005 CR1-Y2_Aves 134 + 151881157 151882005 0 2 575,271, 0,577, +,+, 102792 LINE CR1 1743 chr1 151885654 151887037 CR1-C4 487 + 151885654 151887037 0 3 384,79,338, 0,384,1045, +,+,+, 102802 LINE CR1 1743 chr1 151890965 151894114 GGERVL-A-int 679 - 151890965 151894114 0 3 1314,44,1426, 0,1679,1723, -,-,-, 102811 LTR ERVL 1743 chr1 151894708 151899844 CR1-E 677 - 151894708 151899844 0 3 205,333,222, 0,989,4914, -,-,-, 102814 LINE CR1 1743 chr1 151901432 151904581 GGERVL-A-int 680 + 151901432 151904581 0 3 1433,37,1314, 0,1433,1835, +,+,+, 102825 LTR ERVL 1743 chr1 151910615 151910660 (TTTTG)n 408 + 151910615 151910660 0 2 20,6, 0,39, +,+, 102835 Simple_repeat Simple_repeat 1744 chr1 151914883 151916384 CR1-C3 599 + 151914883 151916384 0 2 598,324, 0,1177, +,+, 102840 LINE CR1 1744 chr1 151922136 151928222 CR1-E 517 + 151922136 151928222 0 2 337,376, 0,5710, +,+, 102851 LINE CR1 1744 chr1 151923974 151926257 CR1-F2 755 - 151923974 151926257 0 2 1790,279, 0,2004, -,-, 102854 LINE CR1 1744 chr1 151925764 151925978 GGLTR3A 920 - 151925764 151925978 0 2 185,29, 0,185, -,-, 102855 LTR ERVL 1744 chr1 151932546 151934199 CR1-F2 524 - 151932546 151934199 0 2 327,958, 0,695, -,-, 102866 LINE CR1 1744 chr1 151945004 151945648 CR1-C 751 + 151945004 151945648 0 2 62,582, 0,62, +,+, 102884 LINE CR1 1744 chr1 151951631 151951885 CR1-X2 449 + 151951631 151951885 0 2 101,103, 0,151, +,+, 102898 LINE CR1 1744 chr1 151954146 151955603 Char12Mar1_GG 526 - 151954146 151955603 0 4 387,300,207,116, 0,434,760,1341, -,-,-,-, 102901 DNA hAT-Charlie 1744 chr1 151972929 151973812 CR1-C3 544 + 151972929 151973812 0 2 598,285, 0,598, +,+, 102932 LINE CR1 1744 chr1 151975719 151976764 CR1-E 486 + 151975719 151976764 0 2 425,109, 0,936, +,+, 102938 LINE CR1 1744 chr1 151977083 151979064 CR1-D 553 - 151977083 151979064 0 3 270,695,118, 0,1167,1863, -,-,-, 102942 LINE CR1 1744 chr1 152000127 152004605 CR1-F 669 + 152000127 152004605 0 3 428,399,3260, 0,807,1218, +,+,+, 102974 LINE CR1 1744 chr1 152013239 152017618 CR1-X2 445 - 152013239 152017618 0 4 170,191,240,30, 0,192,4084,4349, -,-,-,-, 102990 LINE CR1 1744 chr1 152013661 152017327 CR1-C 839 + 152013661 152017327 0 3 2632,929,98, 0,2632,3568, +,+,+, 102991 LINE CR1 1744 chr1 152021671 152023381 CR1-X2 335 - 152021671 152023381 0 2 326,724, 0,986, -,-, 102996 LINE CR1 1744 chr1 152026730 152028804 CR1-Y1_Aves 368 - 152026730 152028804 0 2 264,977, 0,1097, -,-, 103008 LINE CR1 1744 chr1 152031222 152032387 CR1-H 804 + 152031222 152032387 0 3 366,528,266, 0,366,899, +,+,+, 103014 LINE CR1 1745 chr1 152063595 152063670 (GTTT)n 390 + 152063595 152063670 0 2 6,19, 0,56, +,+, 103070 Simple_repeat Simple_repeat 1745 chr1 152068905 152069867 GGLTR8B 241 - 152068905 152069867 0 2 448,192, 0,770, -,-, 103077 LTR ERVL 1745 chr1 152079116 152079228 (TTATTG)n 368 + 152079116 152079228 0 2 52,10, 0,102, +,+, 103088 Simple_repeat Simple_repeat 1745 chr1 152087818 152088065 Char12Mar1_GG 610 - 152087818 152088065 0 2 21,58, 0,189, -,-, 103097 DNA hAT-Charlie 1745 chr1 152111954 152112040 (T)n 955 + 152111954 152112040 0 2 23,22, 0,64, +,+, 103143 Simple_repeat Simple_repeat 1745 chr1 152113307 152114549 CR1-Y1_Aves 328 + 152113307 152114549 0 2 95,255, 0,987, +,+, 103146 LINE CR1 1745 chr1 152114657 152115665 CR1-X 182 + 152114657 152115665 0 2 368,640, 0,368, +,+, 103148 LINE CR1 1745 chr1 152129614 152130284 CR1-X2 555 + 152129614 152130284 0 2 280,126, 0,544, +,+, 103168 LINE CR1 1745 chr1 152148759 152151173 CR1-Y4 498 - 152148759 152151173 0 2 228,1382, 0,1032, -,-, 103191 LINE CR1 1745 chr1 152170278 152173597 GGLTR10B 929 + 152170278 152173597 0 3 382,2552,382, 0,382,2937, +,+,+, 103221 LTR ERVK 1746 chr1 152181012 152183604 CR1-X1 438 - 152181012 152183604 0 2 119,896, 0,1696, -,-, 103231 LINE CR1 1746 chr1 152198603 152199314 CR1-F2 406 + 152198603 152199314 0 2 238,404, 0,307, +,+, 103249 LINE CR1 1746 chr1 152214188 152216006 GGLTR3F1 749 - 152214188 152216006 0 2 519,1299, 0,519, -,-, 103271 LTR ERVL 1746 chr1 152219481 152221276 GGLTR8B 603 + 152219481 152221276 0 2 626,216, 0,1579, +,+, 103280 LTR ERVL 1746 chr1 152250380 152252311 CR1-Y2_Aves 345 + 152250380 152252311 0 3 340,261,181, 0,659,1750, +,+,+, 103318 LINE CR1 1746 chr1 152257144 152260052 CR1-C 788 + 152257144 152260052 0 2 2100,808, 0,2100, +,+, 103334 LINE CR1 1746 chr1 152261514 152262627 CR1-E 341 + 152261514 152262627 0 2 177,451, 0,662, +,+, 103339 LINE CR1 1746 chr1 152266380 152268024 CR1-Y2_Aves 215 + 152266380 152268024 0 2 160,958, 0,686, +,+, 103350 LINE CR1 1746 chr1 152266540 152267054 TguLTR5e 225 - 152266540 152267054 0 2 136,366, 0,148, -,-, 103351 LTR ERVL 1746 chr1 152302435 152303872 CR1-C2 745 - 152302435 152303872 0 2 514,158, 0,1279, -,-, 103393 LINE CR1 1747 chr1 152307558 152308898 CR1-Y4 645 - 152307558 152308898 0 2 1283,49, 0,1291, -,-, 103403 LINE CR1 1747 chr1 152310383 152319837 GGERVL-A-int 770 + 152310383 152319837 0 6 508,2366,269,896,196,132, 0,512,5240,7494,9126,9322, +,+,+,+,+,+, 103406 LTR ERVL 1747 chr1 152315893 152317877 GGERVL-B-int 710 - 152315893 152317877 0 2 1472,510, 0,1474, -,-, 103410 LTR ERVL 1747 chr1 152329276 152329632 CR1-X2 579 + 152329276 152329632 0 2 222,134, 0,222, +,+, 103426 LINE CR1 1747 chr1 152344362 152344948 GGLTR3C2 548 - 152344362 152344948 0 2 183,333, 0,253, -,-, 103449 LTR ERVL 1747 chr1 152349885 152351866 CR1-Y2_Aves 188 + 152349885 152351866 0 2 1358,487, 0,1494, +,+, 103455 LINE CR1 1747 chr1 152364691 152365293 GGLTR8B 176 - 152364691 152365293 0 2 112,141, 0,461, -,-, 103473 LTR ERVL 1747 chr1 152376884 152376982 (T)n 1000 + 152376884 152376982 0 2 20,28, 0,70, +,+, 103489 Simple_repeat Simple_repeat 1747 chr1 152381081 152381257 A-rich 447 + 152381081 152381257 0 2 45,29, 0,147, +,+, 103497 Low_complexity Low_complexity 1747 chr1 152396300 152397353 CR1-C4 607 - 152396300 152397353 0 2 556,497, 0,556, -,-, 103519 LINE CR1 1747 chr1 152400469 152403788 CR1-F2 658 + 152400469 152403788 0 3 249,1704,459, 0,1150,2860, +,+,+, 103522 LINE CR1 1747 chr1 152403785 152404838 CR1-D2 640 - 152403785 152404838 0 2 602,126, 0,927, -,-, 103524 LINE CR1 1747 chr1 152432205 152433788 CR1-C2 814 - 152432205 152433788 0 2 601,982, 0,601, -,-, 103554 LINE CR1 1748 chr1 152436969 152438109 CR1-C 762 + 152436969 152438109 0 2 359,741, 0,399, +,+, 103559 LINE CR1 1748 chr1 152449086 152449158 (TA)n 548 + 152449086 152449158 0 2 19,10, 0,62, +,+, 103574 Simple_repeat Simple_repeat 1748 chr1 152449988 152453482 CR1-Y4 441 - 152449988 152453482 0 3 66,405,1670, 0,614,1824, -,-,-, 103579 LINE CR1 1748 chr1 152451007 152451812 ENS1B-LTR 138 - 152451007 152451812 0 2 421,369, 0,436, -,-, 103581 LTR ERVL 1748 chr1 152456251 152456589 GGLTR8B 314 + 152456251 152456589 0 2 282,31, 0,307, +,+, 103584 LTR ERVL 1748 chr1 152460027 152461439 CR1-Y4 618 - 152460027 152461439 0 2 826,234, 0,1178, -,-, 103587 LINE CR1 1748 chr1 152478057 152479983 CR1-H2 241 + 152478057 152479983 0 2 536,287, 0,1639, +,+, 103602 LINE CR1 1748 chr1 152478587 152479634 CR1-G 304 + 152478587 152479634 0 2 107,406, 0,641, +,+, 103603 LINE CR1 1748 chr1 152513522 152516786 CR1-C4 462 + 152513522 152516786 0 2 2879,385, 0,2879, +,+, 103645 LINE CR1 1748 chr1 152542310 152543004 CR1-Y 357 - 152542310 152543004 0 2 155,483, 0,211, -,-, 103677 LINE CR1 1749 chr1 152580010 152580312 CR1-L3B_Croc 88 - 152580010 152580312 0 2 152,119, 0,183, -,-, 103719 LINE CR1 1749 chr1 152590500 152592127 CR1-F2 611 + 152590500 152592127 0 2 818,464, 0,1163, +,+, 103734 LINE CR1 1749 chr1 152593478 152593673 (TCTTTC)n 432 + 152593478 152593673 0 2 151,8, 0,187, +,+, 103736 Simple_repeat Simple_repeat 1750 chr1 152778151 152778305 (CCCTTC)n 462 + 152778151 152778305 0 2 41,14, 0,140, +,+, 103909 Simple_repeat Simple_repeat 1750 chr1 152797048 152797924 CR1-Y 399 - 152797048 152797924 0 2 535,341, 0,535, -,-, 103932 LINE CR1 1750 chr1 152814638 152820449 CR1-C3 637 - 152814638 152820449 0 2 43,419, 0,5392, -,-, 103944 LINE CR1 1751 chr1 152830931 152832660 CR1-C4 583 - 152830931 152832660 0 2 1271,458, 0,1271, -,-, 103955 LINE CR1 1751 chr1 152876661 152876703 (CTATTT)n 564 + 152876661 152876703 0 2 9,8, 0,34, +,+, 103977 Simple_repeat Simple_repeat 1752 chr1 153059712 153061132 CR1-B2 795 - 153059712 153061132 0 2 202,405, 0,1015, -,-, 104099 LINE CR1 1752 chr1 153062166 153062349 Chompy-7_Croc 368 - 153062166 153062349 0 2 147,36, 0,147, -,-, 104102 DNA PIF-Harbinger 1752 chr1 153069608 153070522 CR1-F2 542 - 153069608 153070522 0 2 535,379, 0,535, -,-, 104105 LINE CR1 1752 chr1 153075525 153078834 CR1-C 820 - 153075525 153078834 0 2 160,3145, 0,164, -,-, 104108 LINE CR1 1753 chr1 153093432 153095377 CR1-Y 388 - 153093432 153095377 0 2 37,152, 0,1793, -,-, 104122 LINE CR1 1753 chr1 153097192 153097633 GGLTR5B 419 + 153097192 153097633 0 2 12,227, 0,214, +,+, 104129 LTR ERVL 1753 chr1 153146164 153147439 CR1-Y2_Aves 385 - 153146164 153147439 0 3 751,141,272, 0,804,1003, -,-,-, 104153 LINE CR1 1753 chr1 153161505 153161601 (TTGCT)n 322 + 153161505 153161601 0 2 8,34, 0,62, +,+, 104164 Simple_repeat Simple_repeat 1753 chr1 153162189 153165886 CR1-C 721 - 153162189 153165886 0 2 2904,285, 0,3412, -,-, 104166 LINE CR1 1753 chr1 153176898 153182043 CR1-H 839 - 153176898 153182043 0 2 465,4169, 0,976, -,-, 104176 LINE CR1 1753 chr1 153186202 153186635 TguLTR5e 421 + 153186202 153186635 0 2 289,79, 0,354, +,+, 104180 LTR ERVL 1754 chr1 153296349 153297261 CR1-11_Crp 151 + 153296349 153297261 0 2 348,236, 0,676, +,+, 104275 LINE CR1 1754 chr1 153320231 153321272 CR1-L3A_Croc 272 + 153320231 153321272 0 2 405,472, 0,569, +,+, 104285 LINE CR1 1754 chr1 153341722 153341786 (GTTTT)n 476 + 153341722 153341786 0 2 9,14, 0,50, +,+, 104301 Simple_repeat Simple_repeat 1755 chr1 153368439 153369106 CR1-11_Crp 129 - 153368439 153369106 0 2 321,323, 0,344, -,-, 104317 LINE CR1 1755 chr1 153387854 153388121 GGLTR5B 644 - 153387854 153388121 0 2 120,120, 0,147, -,-, 104333 LTR ERVL 1755 chr1 153404278 153404335 A-rich 358 + 153404278 153404335 0 2 15,13, 0,44, +,+, 104344 Low_complexity Low_complexity 1755 chr1 153451666 153452256 CR1-Y2_Aves 361 + 153451666 153452256 0 2 469,111, 0,479, +,+, 104381 LINE CR1 1755 chr1 153454201 153455018 CR1-X2 680 - 153454201 153455018 0 2 182,93, 0,724, -,-, 104383 LINE CR1 1755 chr1 153466988 153472299 GGERVL-A-int 767 + 153466988 153472299 0 3 508,2631,2172, 0,508,3139, +,+,+, 104395 LTR ERVL 1755 chr1 153483531 153483871 GGLTR3G1 631 - 153483531 153483871 0 2 113,227, 0,113, -,-, 104405 LTR ERVL 1756 chr1 153498700 153499222 CR1-F2 599 - 153498700 153499222 0 2 225,169, 0,353, -,-, 104419 LINE CR1 1756 chr1 153503534 153506663 CR1-F2 451 - 153503534 153506663 0 2 454,1076, 0,2053, -,-, 104422 LINE CR1 1756 chr1 153509308 153510363 GGERVL-A-int 339 + 153509308 153510363 0 3 174,230,396, 0,427,659, +,+,+, 104427 LTR ERVL 1756 chr1 153535201 153535268 (GCCCCCT)n 408 + 153535201 153535268 0 2 22,8, 0,59, +,+, 104452 Simple_repeat Simple_repeat 1756 chr1 153539464 153539572 (T)n 662 + 153539464 153539572 0 2 28,37, 0,71, +,+, 104473 Simple_repeat Simple_repeat 1756 chr1 153591836 153592253 REP131 231 - 153591836 153592253 0 2 178,134, 0,283, -,-, 104513 DNA? DNA? 1756 chr1 153597699 153599963 CR1-X1 572 - 153597699 153599963 0 2 384,585, 0,1679, -,-, 104518 LINE CR1 1756 chr1 153611009 153612470 CR1-C4 577 + 153611009 153612470 0 2 665,255, 0,1206, +,+, 104529 LINE CR1 1757 chr1 153734107 153741832 GGLTR10C2 679 - 153734107 153741832 0 3 369,6979,369, 0,369,7356, -,-,-, 104629 LTR ERVK 1758 chr1 153753841 153754391 CR1-Y3 644 - 153753841 153754391 0 2 39,511, 0,39, -,-, 104639 LINE CR1 1758 chr1 153841660 153842504 CR1-C4 599 + 153841660 153842504 0 2 244,138, 0,706, +,+, 104693 LINE CR1 1758 chr1 153874693 153875642 CR1-F2 571 - 153874693 153875642 0 2 642,307, 0,642, -,-, 104722 LINE CR1 1758 chr1 153877325 153877785 CR1-Y4 304 - 153877325 153877785 0 2 99,358, 0,102, -,-, 104725 LINE CR1 1760 chr1 154020837 154025151 GGERVL-A-int 727 + 154020837 154025151 0 5 499,1301,2097,231,182, 0,499,1800,3901,4132, +,+,+,+,+, 104840 LTR ERVL 1760 chr1 154052835 154053442 GGLTR8B 429 - 154052835 154053442 0 2 494,113, 0,494, -,-, 104863 LTR ERVL 1760 chr1 154090648 154091476 CR1-C4 141 + 154090648 154091476 0 2 249,430, 0,398, +,+, 104895 LINE CR1 1760 chr1 154092186 154093328 CR1-Y2 283 + 154092186 154093328 0 2 107,1002, 0,140, +,+, 104898 LINE CR1 1760 chr1 154129750 154131871 CR1-G 644 + 154129750 154131871 0 2 320,1801, 0,320, +,+, 104922 LINE CR1 27 chr1 154139720 154144167 GGERVL18-LTR 800 + 154139720 154144167 0 4 3179,1081,68,110, 0,3179,4264,4337, +,+,+,+, 104929 LTR ERVL 1761 chr1 154180058 154185656 GGERV30_LTR 708 - 154180058 154185656 0 2 305,5293, 0,305, -,-, 104952 LTR ERVL 1761 chr1 154199982 154202679 CR1-C 868 + 154199982 154202679 0 2 486,1839, 0,858, +,+, 104966 LINE CR1 1761 chr1 154222846 154224599 CR1-X2 550 + 154222846 154224599 0 2 1013,553, 0,1200, +,+, 104987 LINE CR1 1761 chr1 154230181 154236344 GGERVL18-int 655 - 154230181 154236344 0 4 318,1261,3121,293, 0,1452,2718,5870, -,-,-,-, 104992 LTR ERVL 1761 chr1 154236794 154237579 GGLTR8B 343 - 154236794 154237579 0 2 392,387, 0,398, -,-, 104996 LTR ERVL 1761 chr1 154238305 154239969 CR1-Y2_Aves 253 - 154238305 154239969 0 4 63,813,382,89, 0,71,1001,1575, -,-,-,-, 104998 LINE CR1 1761 chr1 154249088 154250171 CR1-C4 604 + 154249088 154250171 0 2 461,609, 0,474, +,+, 105002 LINE CR1 1761 chr1 154255816 154258035 GGLTR5A 495 - 154255816 154258035 0 3 117,231,129, 0,1835,2090, -,-,-, 105004 LTR ERVL 1761 chr1 154267770 154268103 CR1-X2 393 - 154267770 154268103 0 2 85,211, 0,122, -,-, 105015 LINE CR1 1762 chr1 154281000 154281572 GGLTR5B 606 - 154281000 154281572 0 2 180,362, 0,210, -,-, 105024 LTR ERVL 1762 chr1 154296608 154296998 (TA)n 490 + 154296608 154296998 0 2 176,18, 0,372, +,+, 105040 Simple_repeat Simple_repeat 1762 chr1 154317545 154320321 GGLTR3B1 616 - 154317545 154320321 0 2 2291,485, 0,2291, -,-, 105054 LTR ERVL 1762 chr1 154359834 154360231 Mariner1b_GG 474 - 154359834 154360231 0 2 292,105, 0,292, -,-, 105075 DNA TcMar-Mariner 1762 chr1 154382624 154383159 GGLTR3B1 786 - 154382624 154383159 0 2 40,493, 0,42, -,-, 105085 LTR ERVL 1762 chr1 154400120 154401791 CR1-C 856 - 154400120 154401791 0 2 246,1425, 0,246, -,-, 105099 LINE CR1 1763 chr1 154410393 154416892 CR1-F2 520 + 154410393 154416892 0 5 647,134,64,670,1115, 0,672,806,4710,5384, +,+,+,+,+, 105102 LINE CR1 1763 chr1 154411270 154415099 CR1-H 768 - 154411270 154415099 0 3 3426,189,214, 0,3426,3615, -,-,-, 105104 LINE CR1 1763 chr1 154441539 154443596 CR1-Y4 421 + 154441539 154443596 0 2 275,1410, 0,647, +,+, 105119 LINE CR1 1763 chr1 154451548 154457459 GGLTR3B2 677 - 154451548 154457459 0 3 203,5122,586, 0,203,5325, -,-,-, 105123 LTR ERVL 1764 chr1 154534749 154535666 CR1-D2 617 - 154534749 154535666 0 2 623,95, 0,822, -,-, 105182 LINE CR1 1764 chr1 154563339 154565259 CR1-X 498 + 154563339 154565259 0 3 349,182,68, 0,1271,1852, +,+,+, 105200 LINE CR1 1764 chr1 154581617 154585107 CR1-F 883 - 154581617 154585107 0 2 165,3312, 0,178, -,-, 105212 LINE CR1 1764 chr1 154623888 154624247 TguLTR5e 301 - 154623888 154624247 0 2 123,150, 0,209, -,-, 105236 LTR ERVL 1764 chr1 154625867 154629298 CR1-C 783 - 154625867 154629298 0 3 1958,1091,382, 0,1958,3049, -,-,-, 105239 LINE CR1 1765 chr1 154674519 154675496 CR1-H 664 + 154674519 154675496 0 2 875,102, 0,875, +,+, 105271 LINE CR1 1765 chr1 154699937 154700089 CR1-C2 839 - 154699937 154700089 0 2 59,54, 0,98, -,-, 105295 LINE CR1 1765 chr1 154726634 154727365 GGLTR8A 512 + 154726634 154727365 0 2 597,83, 0,648, +,+, 105312 LTR ERVL 1765 chr1 154732387 154733769 CR1-E 698 + 154732387 154733769 0 2 147,669, 0,713, +,+, 105315 LINE CR1 1765 chr1 154748921 154751990 CR1-G 841 - 154748921 154751990 0 2 147,2148, 0,921, -,-, 105333 LINE CR1 1765 chr1 154754215 154757583 GGLTR10D 943 + 154754215 154757583 0 3 346,2676,346, 0,346,3022, +,+,+, 105337 LTR ERVK 1765 chr1 154762194 154764771 CR1-C 818 - 154762194 154764771 0 2 1805,768, 0,1809, -,-, 105340 LINE CR1 1765 chr1 154767324 154768200 GGLTR5A 392 + 154767324 154768200 0 2 204,164, 0,712, +,+, 105343 LTR ERVL 1765 chr1 154772905 154773483 CR1-Y1_Aves 253 - 154772905 154773483 0 3 116,86,331, 0,145,247, -,-,-, 105350 LINE CR1 1766 chr1 154817075 154818388 CR1-C 882 - 154817075 154818388 0 2 109,1204, 0,109, -,-, 105383 LINE CR1 1766 chr1 154827644 154827892 CR1-C3 759 - 154827644 154827892 0 2 62,186, 0,62, -,-, 105391 LINE CR1 1767 chr1 155016023 155016760 CR1-L3B_Croc 298 - 155016023 155016760 0 2 95,192, 0,545, -,-, 105512 LINE CR1 1767 chr1 155016977 155020449 CR1-G 778 + 155016977 155020449 0 2 1327,2145, 0,1327, +,+, 105513 LINE CR1 220 chr1 155048271 155060432 CR1-X2 405 + 155048271 155060432 0 2 305,395, 0,11766, +,+, 105527 LINE CR1 220 chr1 155048617 155060019 GGERVL-C-int 518 - 155048617 155060019 0 6 582,88,46,3663,883,611, 0,582,729,6245,9908,10791, -,-,-,-,-,-, 105528 LTR ERVL 1767 chr1 155049422 155054862 GGERVL18-int 750 - 155049422 155054862 0 4 345,4087,51,574, 0,345,4815,4866, -,-,-,-, 105530 LTR ERVL 1768 chr1 155132059 155132608 GGLTR8B 340 - 155132059 155132608 0 3 210,138,83, 0,328,466, -,-,-, 105575 LTR ERVL 1768 chr1 155145905 155146719 CR1-D2 626 - 155145905 155146719 0 2 481,244, 0,570, -,-, 105587 LINE CR1 1769 chr1 155204191 155205154 CR1-Y1_Aves 398 + 155204191 155205154 0 3 77,183,386, 0,372,577, +,+,+, 105624 LINE CR1 1769 chr1 155211500 155211686 CR1-D 598 + 155211500 155211686 0 2 105,56, 0,130, +,+, 105632 LINE CR1 1769 chr1 155238253 155239004 GGLTR8A 598 - 155238253 155239004 0 2 684,47, 0,704, -,-, 105651 LTR ERVL 1769 chr1 155254855 155255280 Char12Mar1_GG 698 - 155254855 155255280 0 2 388,37, 0,388, -,-, 105661 DNA hAT-Charlie 1769 chr1 155259084 155260248 CR1-C 786 + 155259084 155260248 0 2 182,425, 0,739, +,+, 105666 LINE CR1 1769 chr1 155261982 155262775 CR1-D 718 + 155261982 155262775 0 2 268,525, 0,268, +,+, 105669 LINE CR1 1770 chr1 155342795 155348452 CR1-C 649 + 155342795 155348452 0 3 452,2076,659, 0,2513,4998, +,+,+, 105724 LINE CR1 1770 chr1 155365395 155366947 CR1-C 876 - 155365395 155366947 0 2 153,986, 0,566, -,-, 105742 LINE CR1 1770 chr1 155386411 155387054 GGLTR5A 335 + 155386411 155387054 0 2 318,163, 0,480, +,+, 105756 LTR ERVL 1770 chr1 155400542 155402961 GGERVL-C-int 811 - 155400542 155402961 0 4 550,878,219,768, 0,550,1428,1651, -,-,-,-, 105764 LTR ERVL 1770 chr1 155421003 155421582 GGLTR8B 276 + 155421003 155421582 0 2 183,220, 0,359, +,+, 105775 LTR ERVL 1770 chr1 155425488 155426305 CR1-D2 725 - 155425488 155426305 0 2 64,318, 0,499, -,-, 105779 LINE CR1 1770 chr1 155442209 155442761 CR1-G 514 - 155442209 155442761 0 2 149,403, 0,149, -,-, 105795 LINE CR1 1771 chr1 155459807 155460075 CR1-D2 759 + 155459807 155460075 0 2 147,121, 0,147, +,+, 105807 LINE CR1 1771 chr1 155464812 155466378 CR1-F2 577 - 155464812 155466378 0 2 447,143, 0,1423, -,-, 105811 LINE CR1 1771 chr1 155471509 155472008 CR1-D 741 + 155471509 155472008 0 2 300,199, 0,300, +,+, 105817 LINE CR1 1771 chr1 155493170 155495090 GGERVL-B-int 822 + 155493170 155495090 0 2 472,1446, 0,474, +,+, 105834 LTR ERVL 1771 chr1 155509163 155510693 CR1-F2 584 - 155509163 155510693 0 2 279,703, 0,827, -,-, 105842 LINE CR1 1771 chr1 155511177 155512747 GGERVL18-LTR 771 - 155511177 155512747 0 3 29,213,1328, 0,29,242, -,-,-, 105844 LTR ERVL 1771 chr1 155535731 155536168 CR1-D2 784 - 155535731 155536168 0 2 50,141, 0,296, -,-, 105868 LINE CR1 1771 chr1 155536550 155536698 A-rich 526 + 155536550 155536698 0 2 40,68, 0,80, +,+, 105872 Low_complexity Low_complexity 1771 chr1 155537096 155542625 CR1-D2 647 - 155537096 155542625 0 2 584,604, 0,4925, -,-, 105873 LINE CR1 1771 chr1 155537680 155542021 GGERVL18-int 632 + 155537680 155542021 0 4 321,1442,2185,347, 0,367,1809,3994, +,+,+,+, 105874 LTR ERVL 1771 chr1 155567092 155569610 CR1-Y2_Aves 137 + 155567092 155569610 0 3 1172,904,173, 0,1187,2345, +,+,+, 105899 LINE CR1 1772 chr1 155618185 155620161 CR1-X2 716 + 155618185 155620161 0 2 51,71, 0,1905, +,+, 105939 LINE CR1 1772 chr1 155668714 155669621 Mariner1_GG 598 - 155668714 155669621 0 2 131,776, 0,131, -,-, 105971 DNA TcMar-Mariner 1772 chr1 155680474 155681769 CR1-F2 863 + 155680474 155681769 0 2 582,713, 0,582, +,+, 105978 LINE CR1 1773 chr1 155789719 155790487 GGLTR8B 115 - 155789719 155790487 0 2 434,334, 0,434, -,-, 106048 LTR ERVL 1773 chr1 155834958 155837168 CR1-G 834 + 155834958 155837168 0 2 942,1268, 0,942, +,+, 106072 LINE CR1 1774 chr1 155907591 155908960 CR1-F 254 + 155907591 155908960 0 2 271,489, 0,880, +,+, 106107 LINE CR1 1775 chr1 156010252 156012131 CR1-Y1_Aves 381 + 156010252 156012131 0 2 279,192, 0,1687, +,+, 106168 LINE CR1 1775 chr1 156010528 156011944 CR1-C 868 - 156010528 156011944 0 2 874,542, 0,874, -,-, 106169 LINE CR1 1775 chr1 156057294 156057739 CR1-Y2_Aves 110 + 156057294 156057739 0 2 208,199, 0,246, +,+, 106193 LINE CR1 1775 chr1 156093961 156094103 (GCCCC)n 320 + 156093961 156094103 0 2 111,6, 0,136, +,+, 106210 Simple_repeat Simple_repeat 1775 chr1 156099143 156100780 CR1-L3A_Croc 96 + 156099143 156100780 0 2 259,502, 0,1135, +,+, 106215 LINE CR1 1776 chr1 156110883 156112248 CR1-Y2_Aves 261 - 156110883 156112248 0 2 170,115, 0,1250, -,-, 106219 LINE CR1 1776 chr1 156157314 156159745 GGLTR5B 632 + 156157314 156159745 0 2 100,423, 0,2008, +,+, 106254 LTR ERVL 1776 chr1 156168036 156168814 CR1-C4 398 - 156168036 156168814 0 2 22,340, 0,438, -,-, 106263 LINE CR1 1776 chr1 156194462 156194789 CR1-B 446 + 156194462 156194789 0 2 75,206, 0,121, +,+, 106290 LINE CR1 1776 chr1 156194792 156196274 CR1-G 746 - 156194792 156196274 0 3 195,502,659, 0,195,823, -,-,-, 106292 LINE CR1 1776 chr1 156214294 156216281 CR1-B2 626 - 156214294 156216281 0 2 266,1721, 0,266, -,-, 106302 LINE CR1 1776 chr1 156226131 156226668 TguLTR5e 299 - 156226131 156226668 0 2 113,283, 0,254, -,-, 106309 LTR ERVL 1777 chr1 156251519 156253722 CR1-F2 842 - 156251519 156253722 0 2 729,551, 0,1652, -,-, 106329 LINE CR1 1777 chr1 156256634 156258662 CR1-Y 732 + 156256634 156258662 0 2 1506,136, 0,1892, +,+, 106334 LINE CR1 1777 chr1 156265791 156266052 CR1-C3 609 + 156265791 156266052 0 2 201,60, 0,201, +,+, 106337 LINE CR1 1777 chr1 156294302 156295660 CR1-L3B_Croc 287 - 156294302 156295660 0 3 400,305,285, 0,523,1073, -,-,-, 106347 LINE CR1 1777 chr1 156314297 156315293 CR1-F2 567 - 156314297 156315293 0 2 289,690, 0,306, -,-, 106353 LINE CR1 1777 chr1 156328683 156330535 LFSINE_Vert 236 + 156328683 156330535 0 2 127,88, 0,1764, +,+, 106363 SINE tRNA 1777 chr1 156332426 156333078 CR1-C3 706 + 156332426 156333078 0 2 605,13, 0,639, +,+, 106368 LINE CR1 1777 chr1 156354663 156355059 CR1-C2 528 + 156354663 156355059 0 2 66,329, 0,67, +,+, 106383 LINE CR1 222 chr1 156367676 156369582 CR1-H 647 + 156367676 156369582 0 3 633,641,619, 0,645,1287, +,+,+, 106397 LINE CR1 1778 chr1 156408038 156408247 CR1-B2 766 + 156408038 156408247 0 2 146,28, 0,181, +,+, 106425 LINE CR1 1778 chr1 156409897 156411149 CR1-Y4 424 + 156409897 156411149 0 2 762,490, 0,762, +,+, 106427 LINE CR1 1778 chr1 156439098 156439828 CR1-C 812 + 156439098 156439828 0 2 529,201, 0,529, +,+, 106458 LINE CR1 1778 chr1 156488424 156489358 GGERVL-B-int 526 - 156488424 156489358 0 2 775,150, 0,784, -,-, 106506 LTR ERVL 1779 chr1 156579326 156580656 CR1-E 323 - 156579326 156580656 0 2 651,216, 0,1114, -,-, 106579 LINE CR1 1779 chr1 156619061 156621875 CR1-H 345 + 156619061 156621875 0 3 81,60,1727, 0,87,1087, +,+,+, 106609 LINE CR1 1779 chr1 156624296 156626711 CR1-Y1_Aves 499 + 156624296 156626711 0 3 954,783,97, 0,1530,2318, +,+,+, 106614 LINE CR1 1780 chr1 156707304 156708705 CR1-C4 538 - 156707304 156708705 0 2 618,783, 0,618, -,-, 106682 LINE CR1 1781 chr1 156832403 156832445 (TTTTTT)n 390 + 156832403 156832445 0 2 8,15, 0,27, +,+, 106780 Simple_repeat Simple_repeat 1781 chr1 156854103 156854356 CR1-E 672 - 156854103 156854356 0 2 150,100, 0,153, -,-, 106800 LINE CR1 1782 chr1 156989399 156995385 Char12Mar1_GG 577 - 156989399 156995385 0 2 632,771, 0,5215, -,-, 106883 DNA hAT-Charlie 1782 chr1 157007554 157011875 REP131 268 - 157007554 157011875 0 2 77,187, 0,4134, -,-, 106896 DNA? DNA? 1783 chr1 157048925 157052154 CR1-F2 389 + 157048925 157052154 0 3 155,632,1588, 0,252,1641, +,+,+, 106934 LINE CR1 1783 chr1 157053798 157055190 GGLTR3B4 612 + 157053798 157055190 0 2 166,351, 0,1041, +,+, 106938 LTR ERVL 1783 chr1 157060585 157060898 CR1-X2 451 - 157060585 157060898 0 2 129,152, 0,161, -,-, 106946 LINE CR1 1783 chr1 157065472 157066274 CR1-E 493 + 157065472 157066274 0 2 373,406, 0,396, +,+, 106950 LINE CR1 1783 chr1 157094362 157094692 UCON28a 367 - 157094362 157094692 0 2 112,126, 0,204, -,-, 106983 Unknown Unknown 1783 chr1 157112721 157114736 CR1-Y2_Aves 270 + 157112721 157114736 0 3 227,747,487, 0,769,1528, +,+,+, 107002 LINE CR1 1783 chr1 157134191 157134902 CR1-F2 585 - 157134191 157134902 0 2 51,228, 0,483, -,-, 107022 LINE CR1 1783 chr1 157139191 157142460 CR1-C2 507 + 157139191 157142460 0 4 883,969,290,1126, 0,883,1852,2143, +,+,+,+, 107029 LINE CR1 222 chr1 157151991 157158048 CR1-D 677 + 157151991 157158048 0 3 331,1399,716, 0,331,5341, +,+,+, 107033 LINE CR1 1784 chr1 157171112 157172426 CR1-Y 772 + 157171112 157172426 0 2 306,139, 0,1175, +,+, 107047 LINE CR1 1784 chr1 157189067 157190696 CR1-G 261 - 157189067 157190696 0 2 633,357, 0,1272, -,-, 107067 LINE CR1 1784 chr1 157189202 157190348 CR1-F0 404 - 157189202 157190348 0 2 490,85, 0,1061, -,-, 107068 LINE CR1 1784 chr1 157236241 157236860 CR1-D2 626 + 157236241 157236860 0 2 95,524, 0,95, +,+, 107121 LINE CR1 1784 chr1 157245408 157246081 GGLTR8B 394 + 157245408 157246081 0 2 168,213, 0,460, +,+, 107127 LTR ERVL 1784 chr1 157248726 157249387 CR1-E 733 + 157248726 157249387 0 2 264,397, 0,264, +,+, 107134 LINE CR1 1784 chr1 157253805 157254646 GGLTR8B 475 - 157253805 157254646 0 2 417,81, 0,760, -,-, 107137 LTR ERVL 1784 chr1 157262073 157263049 CR1-Y1_Aves 375 - 157262073 157263049 0 2 884,92, 0,884, -,-, 107147 LINE CR1 1784 chr1 157269117 157269621 CR1-F2 611 + 157269117 157269621 0 2 214,290, 0,214, +,+, 107160 LINE CR1 1784 chr1 157277896 157278832 ENS1B-LTR 476 + 157277896 157278832 0 2 333,460, 0,476, +,+, 107168 LTR ERVL 1785 chr1 157293544 157298615 CR1-F2 463 - 157293544 157298615 0 4 118,115,726,3296, 0,118,1049,1775, -,-,-,-, 107185 LINE CR1 1785 chr1 157301035 157303197 CR1-E 701 + 157301035 157303197 0 2 140,701, 0,1461, +,+, 107190 LINE CR1 1785 chr1 157306709 157307189 GGLTR5A 273 + 157306709 157307189 0 2 262,137, 0,343, +,+, 107200 LTR ERVL 1785 chr1 157313888 157316198 CR1-C4 540 + 157313888 157316198 0 3 353,1039,333, 0,353,1977, +,+,+, 107205 LINE CR1 1785 chr1 157316746 157317363 GGLTR8B 494 - 157316746 157317363 0 3 89,146,369, 0,102,248, -,-,-, 107208 LTR ERVL 1785 chr1 157326816 157327869 CR1-F2 559 + 157326816 157327869 0 2 115,596, 0,457, +,+, 107220 LINE CR1 1785 chr1 157328773 157332781 CR1-H 814 - 157328773 157332781 0 2 2322,1686, 0,2322, -,-, 107224 LINE CR1 1785 chr1 157338664 157338718 (TTGT)n 494 + 157338664 157338718 0 2 7,19, 0,35, +,+, 107228 Simple_repeat Simple_repeat 1785 chr1 157338940 157340172 CR1-C 770 + 157338940 157340172 0 2 1012,125, 0,1107, +,+, 107230 LINE CR1 1785 chr1 157340680 157341543 CR1-C 585 + 157340680 157341543 0 2 334,529, 0,334, +,+, 107233 LINE CR1 1785 chr1 157342468 157343463 C-rich 464 + 157342468 157343463 0 2 511,95, 0,900, +,+, 107240 Low_complexity Low_complexity 1785 chr1 157343379 157343758 (CCTAT)n 493 + 157343379 157343758 0 2 185,194, 0,185, +,+, 107242 Simple_repeat Simple_repeat 1785 chr1 157343658 157343953 C-rich 538 + 157343658 157343953 0 2 116,50, 0,245, +,+, 107243 Low_complexity Low_complexity 1785 chr1 157343995 157344421 C-rich 496 + 157343995 157344421 0 2 99,141, 0,285, +,+, 107246 Low_complexity Low_complexity 1785 chr1 157344534 157346001 C-rich 519 + 157344534 157346001 0 4 202,401,84,537, 0,265,846,930, +,+,+,+, 107249 Low_complexity Low_complexity 1785 chr1 157346675 157347048 C-rich 530 + 157346675 157347048 0 2 112,83, 0,290, +,+, 107254 Low_complexity Low_complexity 1785 chr1 157347378 157348191 C-rich 529 + 157347378 157348191 0 3 106,171,357, 0,285,456, +,+,+, 107257 Low_complexity Low_complexity 1785 chr1 157348682 157349154 GGLTR3F2 611 + 157348682 157349154 0 2 233,201, 0,271, +,+, 107260 LTR ERVL 1785 chr1 157349584 157350253 C-rich 447 + 157349584 157350253 0 2 373,245, 0,424, +,+, 107264 Low_complexity Low_complexity 1785 chr1 157350289 157351236 C-rich 537 + 157350289 157351236 0 4 179,309,20,176, 0,234,725,771, +,+,+,+, 107266 Low_complexity Low_complexity 1785 chr1 157351367 157351807 C-rich 532 + 157351367 157351807 0 2 141,114, 0,326, +,+, 107269 Low_complexity Low_complexity 1785 chr1 157353472 157354239 C-rich 537 + 157353472 157354239 0 3 184,342,24, 0,214,743, +,+,+, 107274 Low_complexity Low_complexity 1785 chr1 157360709 157362996 CR1-Y4 467 - 157360709 157362996 0 3 760,221,579, 0,764,1708, -,-,-, 107286 LINE CR1 1785 chr1 157379347 157384308 CR1-H 793 - 157379347 157384308 0 3 1497,2231,636, 0,2094,4325, -,-,-, 107305 LINE CR1 1785 chr1 157394119 157401067 CR1-C4 645 - 157394119 157401067 0 3 46,179,834, 0,4078,6114, -,-,-, 107314 LINE CR1 1785 chr1 157404805 157406569 CR1-Y 724 - 157404805 157406569 0 2 1344,378, 0,1386, -,-, 107325 LINE CR1 1786 chr1 157438429 157439239 GGLTR8A 220 - 157438429 157439239 0 2 241,95, 0,715, -,-, 107356 LTR ERVL 1786 chr1 157450561 157451373 GGERVL-C-int 355 + 157450561 157451373 0 2 566,191, 0,621, +,+, 107372 LTR ERVL 1786 chr1 157462868 157465043 CR1-C4 490 + 157462868 157465043 0 2 1382,793, 0,1382, +,+, 107389 LINE CR1 1786 chr1 157471828 157472463 ENS1B-LTR 191 - 157471828 157472463 0 2 400,167, 0,468, -,-, 107400 LTR ERVL 1786 chr1 157502958 157511533 CR1-C 762 - 157502958 157511533 0 2 715,1340, 0,7235, -,-, 107435 LINE CR1 1786 chr1 157503676 157510193 GGLTR3B1 790 - 157503676 157510193 0 4 299,43,5617,510, 0,299,390,6007, -,-,-,-, 107436 LTR ERVL 1786 chr1 157514381 157514465 (T)n 825 + 157514381 157514465 0 2 27,20, 0,64, +,+, 107437 Simple_repeat Simple_repeat 1786 chr1 157514620 157515037 TguLTR5e 408 + 157514620 157515037 0 2 92,276, 0,141, +,+, 107438 LTR ERVL 1786 chr1 157515594 157517722 CR1-E 403 + 157515594 157517722 0 2 1129,233, 0,1895, +,+, 107440 LINE CR1 1786 chr1 157535096 157536340 CR1-D2 614 - 157535096 157536340 0 2 286,285, 0,959, -,-, 107459 LINE CR1 1786 chr1 157538804 157540875 CR1-E 282 + 157538804 157540875 0 4 290,262,390,188, 0,327,1320,1883, +,+,+,+, 107464 LINE CR1 223 chr1 157547776 157548908 CR1-Y1_Aves 466 - 157547776 157548908 0 2 100,185, 0,947, -,-, 107473 LINE CR1 223 chr1 157547877 157548719 CR1-C4 505 - 157547877 157548719 0 2 568,270, 0,572, -,-, 107474 LINE CR1 1787 chr1 157552908 157554548 GGLTR8B 358 + 157552908 157554548 0 2 727,299, 0,1341, +,+, 107477 LTR ERVL 1787 chr1 157578863 157579640 GGLTR8B 374 + 157578863 157579640 0 2 151,566, 0,211, +,+, 107506 LTR ERVL 1787 chr1 157585359 157585802 CR1-Y1_Aves 432 - 157585359 157585802 0 2 126,209, 0,234, -,-, 107517 LINE CR1 1787 chr1 157585784 157586108 CR1-Y3 394 - 157585784 157586108 0 2 118,186, 0,138, -,-, 107519 LINE CR1 1787 chr1 157590400 157591065 GGLTR12A 799 - 157590400 157591065 0 2 382,283, 0,382, -,-, 107526 LTR ERVL 1787 chr1 157594653 157595262 Char12Mar1_GG 708 - 157594653 157595262 0 2 77,42, 0,567, -,-, 107529 DNA hAT-Charlie 1787 chr1 157598128 157603009 CR1-B 553 - 157598128 157603009 0 4 1995,98,632,475, 0,3481,3739,4406, -,-,-,-, 107535 LINE CR1 1787 chr1 157598898 157601598 CR1-C 868 - 157598898 157601598 0 2 1233,323, 0,2377, -,-, 107536 LINE CR1 1787 chr1 157616204 157617400 GGLTR5A 347 - 157616204 157617400 0 2 128,394, 0,802, -,-, 107558 LTR ERVL 1787 chr1 157616405 157617006 Mariner1b_GG 620 + 157616405 157617006 0 2 420,145, 0,456, +,+, 107559 DNA TcMar-Mariner 1787 chr1 157635630 157636875 CR1-Y 688 - 157635630 157636875 0 2 1102,143, 0,1102, -,-, 107575 LINE CR1 1787 chr1 157639707 157640323 CR1-C3 633 + 157639707 157640323 0 2 498,118, 0,498, +,+, 107577 LINE CR1 1787 chr1 157651013 157652041 Mariner1_GG 557 - 157651013 157652041 0 2 471,557, 0,471, -,-, 107594 DNA TcMar-Mariner 1787 chr1 157653803 157654601 CR1-Y1_Aves 380 - 157653803 157654601 0 2 195,190, 0,608, -,-, 107597 LINE CR1 1788 chr1 157680123 157682615 GGLTR5B 518 - 157680123 157682615 0 2 351,187, 0,2305, -,-, 107623 LTR ERVL 1788 chr1 157680477 157682461 GGLTR3F1 807 + 157680477 157682461 0 2 494,1489, 0,495, +,+, 107624 LTR ERVL 1788 chr1 157688860 157689124 Char12Mar1_GG 562 - 157688860 157689124 0 2 76,188, 0,76, -,-, 107632 DNA hAT-Charlie 1788 chr1 157691665 157692175 GGLTR5A 358 + 157691665 157692175 0 2 73,146, 0,364, +,+, 107636 LTR ERVL 1788 chr1 157694947 157698147 CR1-C4 566 + 157694947 157698147 0 2 1901,793, 0,2407, +,+, 107644 LINE CR1 1788 chr1 157737786 157738350 Char12Mar1_GG 608 - 157737786 157738350 0 2 319,220, 0,344, -,-, 107685 DNA hAT-Charlie 1788 chr1 157739194 157740182 GGLTR5A 351 - 157739194 157740182 0 2 358,252, 0,736, -,-, 107687 LTR ERVL 1788 chr1 157739575 157739904 GGERV10_LTR 623 - 157739575 157739904 0 2 158,72, 0,257, -,-, 107688 LTR ERVL 1788 chr1 157740183 157740574 GGERVL18-LTR 770 + 157740183 157740574 0 2 72,318, 0,73, +,+, 107689 LTR ERVL 1788 chr1 157753537 157754718 Mariner1b_GG 546 - 157753537 157754718 0 2 273,277, 0,904, -,-, 107696 DNA TcMar-Mariner 1788 chr1 157755754 157761440 CR1-F2 571 - 157755754 157761440 0 2 322,533, 0,5153, -,-, 107698 LINE CR1 1788 chr1 157756113 157760907 CR1-C2 792 + 157756113 157760907 0 4 334,1193,1842,497, 0,775,1968,4297, +,+,+,+, 107699 LINE CR1 1788 chr1 157761528 157763270 CR1-C4 502 - 157761528 157763270 0 2 700,571, 0,1171, -,-, 107702 LINE CR1 1788 chr1 157795714 157797911 CR1-H 411 - 157795714 157797911 0 2 1807,333, 0,1864, -,-, 107737 LINE CR1 1789 chr1 157814868 157815555 CR1-E 763 - 157814868 157815555 0 2 150,199, 0,488, -,-, 107763 LINE CR1 1789 chr1 157847234 157848126 CR1-Y2 708 - 157847234 157848126 0 2 632,260, 0,632, -,-, 107797 LINE CR1 1789 chr1 157848724 157850252 CR1-F 853 - 157848724 157850252 0 2 1249,279, 0,1249, -,-, 107799 LINE CR1 1789 chr1 157853971 157855657 CR1-G 500 - 157853971 157855657 0 2 64,1622, 0,64, -,-, 107804 LINE CR1 1789 chr1 157861445 157861661 Mariner1_GG 554 - 157861445 157861661 0 2 69,83, 0,133, -,-, 107807 DNA TcMar-Mariner 1789 chr1 157894339 157894468 CR1-F2 680 - 157894339 157894468 0 2 47,78, 0,51, -,-, 107842 LINE CR1 1789 chr1 157895261 157896063 GGLTR5B 603 - 157895261 157896063 0 2 295,151, 0,651, -,-, 107846 LTR ERVL 1789 chr1 157907450 157909951 CR1-D 627 + 157907450 157909951 0 3 141,1069,120, 0,425,2381, +,+,+, 107866 LINE CR1 1789 chr1 157928713 157929380 CR1-L3B_Croc 178 - 157928713 157929380 0 2 198,379, 0,288, -,-, 107886 LINE CR1 1790 chr1 157957728 157960952 CR1-F 816 + 157957728 157960952 0 2 1784,1436, 0,1788, +,+, 107926 LINE CR1 1790 chr1 157965979 157967143 GGLTR5A 500 - 157965979 157967143 0 2 255,84, 0,1080, -,-, 107931 LTR ERVL 1790 chr1 157990288 157990385 (T)n 1000 + 157990288 157990385 0 2 28,19, 0,78, +,+, 107957 Simple_repeat Simple_repeat 1790 chr1 158006051 158006622 CR1-H 474 - 158006051 158006622 0 2 433,41, 0,530, -,-, 107974 LINE CR1 1790 chr1 158006654 158007044 CR1-E 287 - 158006654 158007044 0 2 166,185, 0,205, -,-, 107976 LINE CR1 1790 chr1 158009042 158009938 ENS1-LTR 802 - 158009042 158009938 0 2 691,173, 0,723, -,-, 107979 LTR ERVL 1790 chr1 158022541 158023571 CR1-Y1_Aves 483 - 158022541 158023571 0 2 168,296, 0,734, -,-, 107996 LINE CR1 1790 chr1 158056171 158057743 CR1-C4 536 + 158056171 158057743 0 2 275,673, 0,899, +,+, 108037 LINE CR1 1790 chr1 158064683 158067877 CR1-C4 269 - 158064683 158067877 0 2 2351,339, 0,2855, -,-, 108054 LINE CR1 1790 chr1 158070120 158072444 CR1-D 549 + 158070120 158072444 0 2 119,1546, 0,778, +,+, 108059 LINE CR1 1791 chr1 158089002 158089436 CR1-C3 168 - 158089002 158089436 0 2 108,221, 0,213, -,-, 108078 LINE CR1 1791 chr1 158103187 158104200 CR1-D 700 + 158103187 158104200 0 3 49,252,712, 0,49,301, +,+,+, 108097 LINE CR1 1791 chr1 158116721 158117825 CR1-X2 432 + 158116721 158117825 0 2 701,403, 0,701, +,+, 108114 LINE CR1 1791 chr1 158131596 158132757 GGLTR5A 193 + 158131596 158132757 0 2 387,164, 0,997, +,+, 108135 LTR ERVL 1791 chr1 158148879 158149546 GGLTR11-int 543 + 158148879 158149546 0 2 115,222, 0,445, +,+, 108157 LTR ERV1 1791 chr1 158150524 158151551 CR1-Y2_Aves 263 + 158150524 158151551 0 4 74,253,200,417, 0,114,410,610, +,+,+,+, 108159 LINE CR1 1791 chr1 158152735 158154020 Mariner1_GG 506 + 158152735 158154020 0 2 130,1117, 0,168, +,+, 108163 DNA TcMar-Mariner 1791 chr1 158158924 158160884 CR1-F2 530 + 158158924 158160884 0 2 882,1075, 0,885, +,+, 108169 LINE CR1 1791 chr1 158172207 158178535 GGLTR3E1 756 - 158172207 158178535 0 3 477,5282,569, 0,477,5759, -,-,-, 108184 LTR ERVL 1791 chr1 158191369 158192814 CR1-B2 820 + 158191369 158192814 0 2 123,712, 0,733, +,+, 108208 LINE CR1 1791 chr1 158194610 158196699 CR1-C 780 - 158194610 158196699 0 2 494,1595, 0,494, -,-, 108215 LINE CR1 1791 chr1 158197995 158199093 CR1-C 846 - 158197995 158199093 0 2 411,686, 0,412, -,-, 108217 LINE CR1 1792 chr1 158214182 158216169 CR1-Y 542 - 158214182 158216169 0 2 1803,184, 0,1803, -,-, 108238 LINE CR1 1792 chr1 158248208 158249797 CR1-C2 685 + 158248208 158249797 0 2 223,1353, 0,236, +,+, 108280 LINE CR1 1792 chr1 158253275 158254113 CR1-C4 592 + 158253275 158254113 0 2 382,289, 0,549, +,+, 108285 LINE CR1 1792 chr1 158264386 158265306 CR1-F2 850 - 158264386 158265306 0 2 621,299, 0,621, -,-, 108304 LINE CR1 1792 chr1 158271388 158274201 CR1-F2 684 + 158271388 158274201 0 3 290,377,2140, 0,290,673, +,+,+, 108312 LINE CR1 1792 chr1 158275787 158277613 CR1-G 792 - 158275787 158277613 0 2 232,1594, 0,232, -,-, 108319 LINE CR1 1792 chr1 158290398 158290717 CR1-E 397 - 158290398 158290717 0 2 23,250, 0,69, -,-, 108342 LINE CR1 1792 chr1 158311967 158312627 GGLTR8B 224 + 158311967 158312627 0 2 238,119, 0,541, +,+, 108364 LTR ERVL 1792 chr1 158314296 158315480 CR1-H 762 + 158314296 158315480 0 2 93,1087, 0,97, +,+, 108366 LINE CR1 1792 chr1 158315452 158319049 CR1-B 878 + 158315452 158319049 0 2 642,2013, 0,1584, +,+, 108367 LINE CR1 1792 chr1 158319917 158320779 GGLTR7-int 761 - 158319917 158320779 0 3 349,290,222, 0,350,640, -,-,-, 108371 LTR ERV1 1792 chr1 158324202 158324379 TguLTR5d 527 - 158324202 158324379 0 2 72,84, 0,93, -,-, 108380 LTR ERVL 1792 chr1 158324984 158325594 GGLTR3G1 762 + 158324984 158325594 0 2 528,47, 0,563, +,+, 108381 LTR ERVL 1792 chr1 158332628 158332837 GGLTR5A 434 + 158332628 158332837 0 2 177,32, 0,177, +,+, 108394 LTR ERVL 1793 chr1 158345213 158345960 CR1-D 519 + 158345213 158345960 0 2 590,157, 0,590, +,+, 108410 LINE CR1 1793 chr1 158352193 158355418 CR1-F2 315 + 158352193 158355418 0 2 171,337, 0,2888, +,+, 108417 LINE CR1 1793 chr1 158356907 158361119 CR1-H 765 + 158356907 158361119 0 2 2212,1993, 0,2219, +,+, 108429 LINE CR1 1793 chr1 158367074 158368681 CR1-E 671 - 158367074 158368681 0 3 94,125,856, 0,94,751, -,-,-, 108435 LINE CR1 1793 chr1 158371746 158372941 GGLTR5A 460 + 158371746 158372941 0 3 149,141,102, 0,682,1093, +,+,+, 108445 LTR ERVL 1793 chr1 158376841 158377188 CR1-Y2_Aves 320 + 158376841 158377188 0 2 207,29, 0,318, +,+, 108454 LINE CR1 1793 chr1 158377589 158380289 CR1-Y3 516 - 158377589 158380289 0 2 73,2394, 0,306, -,-, 108456 LINE CR1 1793 chr1 158384138 158385547 CR1-H 757 - 158384138 158385547 0 2 1254,153, 0,1256, -,-, 108463 LINE CR1 1793 chr1 158387768 158392675 CR1-Y1_Aves 165 - 158387768 158392675 0 3 256,34,245, 0,316,4662, -,-,-, 108468 LINE CR1 1793 chr1 158404244 158404620 GGLTR8B 430 + 158404244 158404620 0 2 321,55, 0,321, +,+, 108494 LTR ERVL 1793 chr1 158413378 158413708 CR1-X 498 - 158413378 158413708 0 2 130,200, 0,130, -,-, 108508 LINE CR1 1793 chr1 158418482 158423504 CR1-B2 597 - 158418482 158423504 0 3 226,16,630, 0,356,4392, -,-,-, 108512 LINE CR1 1793 chr1 158418833 158422874 GGERV30_LTR 804 - 158418833 158422874 0 2 44,3997, 0,44, -,-, 108514 LTR ERVL 1793 chr1 158447563 158448037 GGLTR6 480 - 158447563 158448037 0 2 169,305, 0,169, -,-, 108545 LTR ERVL 1793 chr1 158456749 158458546 CR1-C4 468 + 158456749 158458546 0 2 382,280, 0,1517, +,+, 108559 LINE CR1 1793 chr1 158458597 158459414 CR1-Y2_Aves 108 + 158458597 158459414 0 2 181,159, 0,658, +,+, 108561 LINE CR1 1794 chr1 158475143 158475329 (TA)n 707 + 158475143 158475329 0 2 50,114, 0,72, +,+, 108580 Simple_repeat Simple_repeat 1794 chr1 158476124 158476202 A-rich 316 + 158476124 158476202 0 2 28,28, 0,50, +,+, 108582 Low_complexity Low_complexity 1794 chr1 158509376 158510987 CR1-H2 839 + 158509376 158510987 0 2 609,139, 0,1472, +,+, 108628 LINE CR1 1794 chr1 158527940 158528931 CR1-Y2_Aves 277 - 158527940 158528931 0 2 62,929, 0,62, -,-, 108645 LINE CR1 1794 chr1 158542330 158543482 CR1-F2 442 + 158542330 158543482 0 2 306,730, 0,422, +,+, 108663 LINE CR1 1794 chr1 158547024 158550296 CR1-Y2_Aves 306 + 158547024 158550296 0 2 1036,231, 0,3041, +,+, 108669 LINE CR1 1794 chr1 158556813 158559223 CR1-D 696 - 158556813 158559223 0 2 328,511, 0,1899, -,-, 108686 LINE CR1 1794 chr1 158557138 158558714 CR1-G 729 + 158557138 158558714 0 2 840,736, 0,840, +,+, 108687 LINE CR1 1794 chr1 158560235 158561279 CR1-H 772 + 158560235 158561279 0 2 191,853, 0,191, +,+, 108689 LINE CR1 1794 chr1 158577632 158581331 CR1-Y 615 - 158577632 158581331 0 3 731,2313,88, 0,1298,3611, -,-,-, 108719 LINE CR1 1795 chr1 158601057 158602155 CR1-X2 493 + 158601057 158602155 0 3 359,351,160, 0,476,938, +,+,+, 108746 LINE CR1 1795 chr1 158606674 158610294 GGLTR3E1 777 - 158606674 158610294 0 2 375,216, 0,3404, -,-, 108756 LTR ERVL 1795 chr1 158612657 158612914 GGLTR8A 307 + 158612657 158612914 0 2 68,159, 0,98, +,+, 108766 LTR ERVL 1795 chr1 158614821 158617298 CR1-C4 420 + 158614821 158617298 0 2 154,2284, 0,193, +,+, 108770 LINE CR1 1795 chr1 158624473 158626481 CR1-B 627 + 158624473 158626481 0 2 843,655, 0,1353, +,+, 108783 LINE CR1 1795 chr1 158626481 158630601 GGLTR7-int 598 - 158626481 158630601 0 4 597,95,232,2648, 0,597,692,1472, -,-,-,-, 108785 LTR ERV1 1795 chr1 158647214 158649865 CR1-C4 619 + 158647214 158649865 0 3 1408,55,161, 0,1472,2490, +,+,+, 108808 LINE CR1 1795 chr1 158652363 158656353 CR1-F 488 + 158652363 158656353 0 3 547,1706,1378, 0,547,2612, +,+,+, 108817 LINE CR1 1795 chr1 158656845 158658061 Char12Mar1_GG 379 - 158656845 158658061 0 2 638,518, 0,698, -,-, 108818 DNA hAT-Charlie 1795 chr1 158663488 158664146 CR1-C3 592 - 158663488 158664146 0 2 600,56, 0,602, -,-, 108830 LINE CR1 1795 chr1 158675481 158676046 CR1-Y2_Aves 115 - 158675481 158676046 0 2 161,373, 0,192, -,-, 108844 LINE CR1 1795 chr1 158719767 158721496 GGLTR11 577 + 158719767 158721496 0 2 1185,544, 0,1185, +,+, 108910 LTR ERV1 1795 chr1 158721498 158725854 CR1-C4 490 - 158721498 158725854 0 2 824,79, 0,4277, -,-, 108911 LINE CR1 1796 chr1 158737609 158738575 CR1-E 277 + 158737609 158738575 0 2 453,213, 0,753, +,+, 108923 LINE CR1 1796 chr1 158742377 158747495 GGERV10_LTR 605 + 158742377 158747495 0 7 82,153,657,900,2885,85,159, 0,172,333,1003,1903,4788,4959, +,+,+,+,+,+,+, 108929 LTR ERVL 1796 chr1 158747973 158751827 GGERVL18-LTR 636 - 158747973 158751827 0 2 3516,334, 0,3520, -,-, 108931 LTR ERVL 1796 chr1 158759071 158759607 CR1-Y1_Aves 483 - 158759071 158759607 0 2 493,43, 0,493, -,-, 108940 LINE CR1 1796 chr1 158762090 158762137 (TTGTT)n 620 + 158762090 158762137 0 2 10,11, 0,36, +,+, 108943 Simple_repeat Simple_repeat 1796 chr1 158763177 158763667 GGLTR3F2 760 - 158763177 158763667 0 2 228,230, 0,260, -,-, 108946 LTR ERVL 1796 chr1 158799671 158800641 CR1-C4 437 + 158799671 158800641 0 2 701,124, 0,846, +,+, 108999 LINE CR1 1796 chr1 158801006 158802449 CR1-E 684 + 158801006 158802449 0 2 142,662, 0,781, +,+, 109003 LINE CR1 1796 chr1 158807152 158808150 ENS1B-LTR 492 + 158807152 158808150 0 2 127,462, 0,536, +,+, 109015 LTR ERVL 1796 chr1 158827537 158829005 CR1-D2 603 - 158827537 158829005 0 2 657,258, 0,1210, -,-, 109041 LINE CR1 1796 chr1 158837405 158840133 CR1-Y 755 + 158837405 158840133 0 3 189,281,1256, 0,657,1472, +,+,+, 109054 LINE CR1 1796 chr1 158840781 158841908 CR1-C4 480 + 158840781 158841908 0 2 29,1063, 0,64, +,+, 109057 LINE CR1 1796 chr1 158845305 158845906 CR1-F2 381 + 158845305 158845906 0 2 113,477, 0,124, +,+, 109068 LINE CR1 1797 chr1 158866950 158867700 CR1-Y2 376 - 158866950 158867700 0 2 354,355, 0,395, -,-, 109106 LINE CR1 1797 chr1 158872334 158875568 CR1-F2 687 - 158872334 158875568 0 2 701,2005, 0,1229, -,-, 109112 LINE CR1 1797 chr1 158880145 158883939 CR1-Y4 522 + 158880145 158883939 0 2 400,1062, 0,2732, +,+, 109117 LINE CR1 1797 chr1 158880535 158882874 CR1-F0 472 - 158880535 158882874 0 3 111,166,264, 0,1909,2075, -,-,-, 109118 LINE CR1 1797 chr1 158905424 158906243 GGLTR3B4 743 + 158905424 158906243 0 2 304,89, 0,730, +,+, 109139 LTR ERVL 1797 chr1 158962497 158966929 GGLTR8B 344 + 158962497 158966929 0 2 836,117, 0,4315, +,+, 109202 LTR ERVL 1797 chr1 158964456 158964803 CR1-Y 444 - 158964456 158964803 0 2 80,185, 0,162, -,-, 109205 LINE CR1 1797 chr1 158964823 158965961 CR1-G 423 - 158964823 158965961 0 2 774,154, 0,984, -,-, 109207 LINE CR1 1797 chr1 158968828 158969313 Mariner1_GG 579 - 158968828 158969313 0 2 410,75, 0,410, -,-, 109212 DNA TcMar-Mariner 1797 chr1 158982844 158983733 CR1-C4 548 - 158982844 158983733 0 2 161,249, 0,640, -,-, 109224 LINE CR1 1798 chr1 158991468 158992966 CR1-E 404 - 158991468 158992966 0 2 560,938, 0,560, -,-, 109237 LINE CR1 1798 chr1 159005056 159008383 CR1-E 546 + 159005056 159008383 0 2 592,416, 0,2911, +,+, 109249 LINE CR1 1798 chr1 159015710 159016233 TguLTR5e 444 - 159015710 159016233 0 2 131,204, 0,319, -,-, 109261 LTR ERVL 1798 chr1 159043536 159044019 GGLTR5B 246 + 159043536 159044019 0 2 314,148, 0,335, +,+, 109302 LTR ERVL 1798 chr1 159054913 159055024 (TTTTGT)n 354 + 159054913 159055024 0 2 19,26, 0,85, +,+, 109317 Simple_repeat Simple_repeat 1799 chr1 159133350 159133414 (TTTA)n 288 + 159133350 159133414 0 2 24,16, 0,48, +,+, 109379 Simple_repeat Simple_repeat 1799 chr1 159191214 159192060 CR1-D2 590 - 159191214 159192060 0 2 547,299, 0,547, -,-, 109448 LINE CR1 1799 chr1 159197211 159197732 GGLTR8B 266 - 159197211 159197732 0 2 124,360, 0,161, -,-, 109453 LTR ERVL 1800 chr1 159254802 159256129 CR1-C4 544 - 159254802 159256129 0 2 873,337, 0,990, -,-, 109513 LINE CR1 1800 chr1 159258234 159258293 A-rich 358 + 159258234 159258293 0 2 23,15, 0,44, +,+, 109517 Low_complexity Low_complexity 1800 chr1 159322903 159325171 CR1-F2 787 - 159322903 159325171 0 2 422,145, 0,2123, -,-, 109605 LINE CR1 1800 chr1 159330780 159331583 CR1-F2 513 + 159330780 159331583 0 2 121,679, 0,124, +,+, 109610 LINE CR1 1800 chr1 159371268 159371346 (CCTTTCT)n 276 + 159371268 159371346 0 2 17,18, 0,60, +,+, 109656 Simple_repeat Simple_repeat 1800 chr1 159375487 159378386 CR1-X 470 - 159375487 159378386 0 4 231,1285,721,632, 0,231,1522,2267, -,-,-,-, 109662 LINE CR1 1801 chr1 159404947 159405235 CR1-C2 765 + 159404947 159405235 0 2 228,60, 0,228, +,+, 109695 LINE CR1 1801 chr1 159406784 159407972 CR1-E 693 + 159406784 159407972 0 2 940,248, 0,940, +,+, 109699 LINE CR1 1801 chr1 159413545 159414663 CR1-D2 239 - 159413545 159414663 0 3 151,235,689, 0,190,429, -,-,-, 109708 LINE CR1 1801 chr1 159423814 159426237 CR1-Y1_Aves 196 - 159423814 159426237 0 2 713,110, 0,2313, -,-, 109719 LINE CR1 1801 chr1 159433042 159438023 Char12Mar1_GG 467 - 159433042 159438023 0 2 494,645, 0,4336, -,-, 109736 DNA hAT-Charlie 1801 chr1 159434839 159435095 CR1-D2 692 - 159434839 159435095 0 2 198,32, 0,224, -,-, 109737 LINE CR1 1801 chr1 159469275 159469371 A-rich 634 + 159469275 159469371 0 2 32,41, 0,55, +,+, 109774 Low_complexity Low_complexity 1801 chr1 159491866 159492239 GGLTR8B 216 - 159491866 159492239 0 2 134,191, 0,182, -,-, 109792 LTR ERVL 1801 chr1 159512900 159513417 Mariner1_GG 638 - 159512900 159513417 0 2 237,279, 0,238, -,-, 109816 DNA TcMar-Mariner 1802 chr1 159517471 159517607 (T)n 805 + 159517471 159517607 0 2 47,27, 0,109, +,+, 109819 Simple_repeat Simple_repeat 1802 chr1 159534939 159537482 CR1-F 414 + 159534939 159537482 0 2 243,1765, 0,778, +,+, 109836 LINE CR1 1802 chr1 159562964 159563631 CR1-Y2_Aves 209 + 159562964 159563631 0 2 304,191, 0,476, +,+, 109863 LINE CR1 1802 chr1 159629023 159629713 GGLTR5B 422 + 159629023 159629713 0 3 92,123,178, 0,388,512, +,+,+, 109933 LTR ERVL 1802 chr1 159642572 159642902 GGERV10_LTR 593 + 159642572 159642902 0 2 78,159, 0,171, +,+, 109947 LTR ERVL 1803 chr1 159667165 159670932 TguLTR5e 249 - 159667165 159670932 0 3 17,195,282, 0,82,3485, -,-,-, 109975 LTR ERVL 1803 chr1 159675469 159676672 Mariner1_GG 570 + 159675469 159676672 0 2 229,941, 0,262, +,+, 109999 DNA TcMar-Mariner 1803 chr1 159694502 159696474 CR1-Y2_Aves 260 - 159694502 159696474 0 2 58,717, 0,1255, -,-, 110024 LINE CR1 1803 chr1 159703882 159706999 CR1-C4 523 + 159703882 159706999 0 4 958,625,545,821, 0,958,1583,2296, +,+,+,+, 110037 LINE CR1 1803 chr1 159743861 159745068 ENS3-int 853 - 159743861 159745068 0 2 273,933, 0,274, -,-, 110080 LTR ERVL 1804 chr1 159794190 159796392 CR1-G 766 - 159794190 159796392 0 2 40,2160, 0,42, -,-, 110140 LINE CR1 1804 chr1 159822031 159823150 CR1-C3 585 + 159822031 159823150 0 2 183,936, 0,183, +,+, 110182 LINE CR1 1804 chr1 159837929 159838004 A-rich 390 + 159837929 159838004 0 2 18,16, 0,59, +,+, 110197 Low_complexity Low_complexity 1804 chr1 159839612 159841042 CR1-C3 617 + 159839612 159841042 0 2 323,195, 0,1235, +,+, 110202 LINE CR1 1804 chr1 159846457 159847357 CR1-C3 652 + 159846457 159847357 0 3 505,315,22, 0,505,878, +,+,+, 110214 LINE CR1 1804 chr1 159880714 159883354 TguLTR5e 380 + 159880714 159883354 0 2 262,85, 0,2555, +,+, 110267 LTR ERVL 1804 chr1 159880980 159883196 CR1-C4 653 + 159880980 159883196 0 2 487,329, 0,1887, +,+, 110268 LINE CR1 1804 chr1 159894689 159895961 CR1-D 708 - 159894689 159895961 0 2 591,681, 0,591, -,-, 110285 LINE CR1 1804 chr1 159895951 159897737 CR1-H2 270 + 159895951 159897737 0 3 136,502,165, 0,1116,1621, +,+,+, 110286 LINE CR1 1805 chr1 159913279 159913383 GA-rich 246 + 159913279 159913383 0 2 29,20, 0,84, +,+, 110309 Low_complexity Low_complexity 1805 chr1 159914810 159917495 CR1-C 846 + 159914810 159917495 0 2 1209,995, 0,1690, +,+, 110314 LINE CR1 1805 chr1 159927530 159928642 CR1-X 234 - 159927530 159928642 0 2 705,363, 0,749, -,-, 110330 LINE CR1 1805 chr1 159960381 159961148 CR1-E 654 - 159960381 159961148 0 2 45,722, 0,45, -,-, 110374 LINE CR1 1805 chr1 159961931 159962906 CR1-C4 477 + 159961931 159962906 0 3 507,166,302, 0,507,673, +,+,+, 110375 LINE CR1 1805 chr1 159966572 159967244 GGLTR8A 98 - 159966572 159967244 0 3 127,223,252, 0,174,420, -,-,-, 110380 LTR ERVL 1805 chr1 159981902 159982348 CR1-C4 469 - 159981902 159982348 0 2 218,225, 0,221, -,-, 110403 LINE CR1 1805 chr1 160009067 160011539 CR1-C4 319 + 160009067 160011539 0 2 172,1675, 0,797, +,+, 110435 LINE CR1 1805 chr1 160033110 160037728 ENS1-LTR 954 + 160033110 160037728 0 3 880,2825,913, 0,880,3705, +,+,+, 110455 LTR ERVL 1806 chr1 160041071 160041803 CR1-Y1_Aves 495 + 160041071 160041803 0 2 306,422, 0,310, +,+, 110460 LINE CR1 1806 chr1 160041798 160042710 CR1-Y1_Aves 421 + 160041798 160042710 0 3 79,323,96, 0,482,816, +,+,+, 110461 LINE CR1 1806 chr1 160047004 160052077 CR1-F 845 - 160047004 160052077 0 2 4032,440, 0,4633, -,-, 110471 LINE CR1 1806 chr1 160085953 160087281 CR1-C4 514 + 160085953 160087281 0 2 144,604, 0,724, +,+, 110509 LINE CR1 1806 chr1 160095704 160097307 GGLTR3B1 760 + 160095704 160097307 0 2 1097,506, 0,1097, +,+, 110518 LTR ERVL 1806 chr1 160105277 160106246 GGLTR3C2 671 - 160105277 160106246 0 2 385,109, 0,860, -,-, 110533 LTR ERVL 1806 chr1 160116070 160117429 CR1-C4 652 - 160116070 160117429 0 3 70,147,1139, 0,70,220, -,-,-, 110553 LINE CR1 1806 chr1 160119870 160120127 CR1-Y4 372 - 160119870 160120127 0 2 203,54, 0,203, -,-, 110557 LINE CR1 1806 chr1 160121024 160121510 GGLTR5A 357 + 160121024 160121510 0 2 341,140, 0,346, +,+, 110559 LTR ERVL 1806 chr1 160124617 160128000 GGLTR10B 944 - 160124617 160128000 0 3 382,2614,382, 0,385,3001, -,-,-, 110567 LTR ERVK 1806 chr1 160137915 160141286 GGLTR10D 941 - 160137915 160141286 0 3 343,2682,346, 0,343,3025, -,-,-, 110586 LTR ERVK 1806 chr1 160148940 160151044 CR1-C4 528 - 160148940 160151044 0 2 1462,642, 0,1462, -,-, 110601 LINE CR1 1807 chr1 160190779 160190914 Char12Mar1_GG 689 - 160190779 160190914 0 2 76,59, 0,76, -,-, 110654 DNA hAT-Charlie 1807 chr1 160196838 160198997 CR1-E 300 + 160196838 160198997 0 2 431,1219, 0,940, +,+, 110664 LINE CR1 1807 chr1 160207884 160210356 CR1-D2 527 - 160207884 160210356 0 3 888,141,230, 0,1497,2242, -,-,-, 110676 LINE CR1 1807 chr1 160209522 160210125 GGLTR3A 624 + 160209522 160210125 0 2 442,122, 0,481, +,+, 110678 LTR ERVL 1807 chr1 160243459 160245280 CR1-C 848 + 160243459 160245280 0 2 1213,586, 0,1235, +,+, 110728 LINE CR1 1807 chr1 160249912 160251464 CR1-F2 733 + 160249912 160251464 0 2 393,293, 0,1259, +,+, 110733 LINE CR1 1807 chr1 160258589 160258639 (AT)n 528 + 160258589 160258639 0 2 9,13, 0,37, +,+, 110743 Simple_repeat Simple_repeat 1807 chr1 160265626 160266032 Z-REP 339 + 160265626 160266032 0 2 108,106, 0,300, +,+, 110755 Satellite macro 1807 chr1 160275984 160276052 (TATT)n 384 + 160275984 160276052 0 2 6,6, 0,62, +,+, 110771 Simple_repeat Simple_repeat 1807 chr1 160276173 160281250 CR1-H 778 + 160276173 160281250 0 2 192,4519, 0,558, +,+, 110773 LINE CR1 1807 chr1 160287053 160288860 CR1-D 693 + 160287053 160288860 0 2 331,184, 0,1623, +,+, 110782 LINE CR1 225 chr1 160300299 160301144 CR1-C4 507 - 160300299 160301144 0 2 270,575, 0,270, -,-, 110799 LINE CR1 1808 chr1 160302964 160304024 CR1-D 715 + 160302964 160304024 0 2 915,145, 0,915, +,+, 110803 LINE CR1 1808 chr1 160309536 160309982 GGLTR8B 381 + 160309536 160309982 0 2 61,333, 0,113, +,+, 110810 LTR ERVL 1808 chr1 160310253 160312553 GGLTR3B1 412 + 160310253 160312553 0 2 1779,521, 0,1779, +,+, 110811 LTR ERVL 1808 chr1 160313901 160314236 CR1-Y2_Aves 228 + 160313901 160314236 0 2 106,86, 0,249, +,+, 110812 LINE CR1 1808 chr1 160315039 160315866 GGLTR5B 477 - 160315039 160315866 0 2 153,174, 0,653, -,-, 110814 LTR ERVL 1808 chr1 160315237 160315706 Mariner1_GG 691 - 160315237 160315706 0 2 111,340, 0,129, -,-, 110816 DNA TcMar-Mariner 1808 chr1 160322144 160323552 GGLTR8B 258 - 160322144 160323552 0 2 154,665, 0,743, -,-, 110825 LTR ERVL 1808 chr1 160322298 160322885 GGLTR3G2 461 - 160322298 160322885 0 3 46,61,366, 0,133,221, -,-,-, 110826 LTR ERVL 1808 chr1 160332710 160333833 CR1-C2 671 - 160332710 160333833 0 2 895,228, 0,895, -,-, 110843 LINE CR1 1808 chr1 160333814 160335088 CR1-C3 421 - 160333814 160335088 0 2 148,317, 0,957, -,-, 110844 LINE CR1 1808 chr1 160346365 160349606 CR1-D 507 - 160346365 160349606 0 2 806,460, 0,2781, -,-, 110862 LINE CR1 1808 chr1 160347162 160349146 GGLTR3F1 739 - 160347162 160349146 0 2 1489,493, 0,1491, -,-, 110863 LTR ERVL 1808 chr1 160368954 160369419 CR1-X2 467 - 160368954 160369419 0 2 254,209, 0,256, -,-, 110893 LINE CR1 1808 chr1 160369428 160370637 CR1-X2 374 - 160369428 160370637 0 2 1030,141, 0,1068, -,-, 110894 LINE CR1 1808 chr1 160392203 160392854 ENS1B-LTR 445 + 160392203 160392854 0 2 280,369, 0,282, +,+, 110923 LTR ERVL 1808 chr1 160395772 160397450 Char12Mar1_GG 565 - 160395772 160397450 0 3 853,101,134, 0,854,1544, -,-,-, 110925 DNA hAT-Charlie 1808 chr1 160403196 160403568 GGLTR3B2 804 + 160403196 160403568 0 2 124,244, 0,128, +,+, 110937 LTR ERVL 1808 chr1 160403568 160404031 CR1-C4 602 + 160403568 160404031 0 2 248,214, 0,249, +,+, 110938 LINE CR1 1808 chr1 160416222 160416761 Char12Mar1_GG 596 - 160416222 160416761 0 2 21,493, 0,46, -,-, 110956 DNA hAT-Charlie 1808 chr1 160416760 160417267 CR1-C4 540 - 160416760 160417267 0 2 176,331, 0,176, -,-, 110958 LINE CR1 1808 chr1 160419591 160424658 GGLTR3E2 863 + 160419591 160424658 0 2 69,509, 0,4558, +,+, 110961 LTR ERVL 1808 chr1 160419682 160424149 GGERVL-B-int 803 + 160419682 160424149 0 3 3252,646,529, 0,3260,3938, +,+,+, 110962 LTR ERVL 1808 chr1 160425421 160428657 CR1-Y4 521 + 160425421 160428657 0 3 489,382,63, 0,817,3173, +,+,+, 110965 LINE CR1 1808 chr1 160426615 160428594 GGERVL-B-int 724 - 160426615 160428594 0 4 1282,176,74,379, 0,1314,1492,1600, -,-,-,-, 110967 LTR ERVL 1808 chr1 160428700 160429070 GGLTR8B 247 + 160428700 160429070 0 2 103,124, 0,246, +,+, 110970 LTR ERVL 1809 chr1 160442873 160443646 CR1-Y2_Aves 179 + 160442873 160443646 0 2 173,480, 0,293, +,+, 110989 LINE CR1 1809 chr1 160449400 160450877 Char12Mar1_GG 634 - 160449400 160450877 0 2 73,491, 0,986, -,-, 110994 DNA hAT-Charlie 1809 chr1 160457278 160457442 CR1-D2 314 - 160457278 160457442 0 2 92,45, 0,119, -,-, 111006 LINE CR1 1809 chr1 160495919 160497093 CR1-F2 466 - 160495919 160497093 0 2 415,336, 0,838, -,-, 111060 LINE CR1 1809 chr1 160497071 160498192 CR1-C3 343 - 160497071 160498192 0 2 539,114, 0,1007, -,-, 111063 LINE CR1 1809 chr1 160508838 160510693 Char12Mar1_GG 399 - 160508838 160510693 0 2 455,88, 0,1767, -,-, 111078 DNA hAT-Charlie 1809 chr1 160540031 160544025 GGERVL18-LTR 763 + 160540031 160544025 0 4 2473,1304,113,58, 0,2473,3777,3936, +,+,+,+, 111121 LTR ERVL 226 chr1 160562141 160563204 CR1-E 655 + 160562141 160563204 0 2 888,157, 0,906, +,+, 111144 LINE CR1 1810 chr1 160566012 160567293 GGLTR8B 427 - 160566012 160567293 0 2 692,381, 0,900, -,-, 111149 LTR ERVL 1810 chr1 160571551 160572195 CR1-D2 512 + 160571551 160572195 0 2 140,504, 0,140, +,+, 111160 LINE CR1 1810 chr1 160598245 160600238 CR1-F2 615 - 160598245 160600238 0 3 352,621,104, 0,402,1889, -,-,-, 111190 LINE CR1 1810 chr1 160623356 160624444 GGLTR3E3 726 + 160623356 160624444 0 2 462,99, 0,989, +,+, 111221 LTR ERVL 1810 chr1 160628053 160628435 CR1-E 361 + 160628053 160628435 0 2 195,176, 0,206, +,+, 111228 LINE CR1 1810 chr1 160634538 160636550 GGERVL-A-int 852 - 160634538 160636550 0 2 479,1533, 0,479, -,-, 111236 LTR ERVL 1810 chr1 160636549 160639571 GGERVL-B-int 834 - 160636549 160639571 0 2 2925,95, 0,2927, -,-, 111237 LTR ERVL 1810 chr1 160661646 160661690 (CTCCCC)n 570 + 160661646 160661690 0 2 10,13, 0,31, +,+, 111272 Simple_repeat Simple_repeat 1810 chr1 160667830 160671058 GGERVL-B-int 873 - 160667830 160671058 0 2 1348,1349, 0,1879, -,-, 111282 LTR ERVL 1810 chr1 160683680 160684379 GGLTR3B1 630 + 160683680 160684379 0 2 177,304, 0,395, +,+, 111306 LTR ERVL 1811 chr1 160708383 160708970 CR1-X2 479 - 160708383 160708970 0 2 298,278, 0,309, -,-, 111338 LINE CR1 1811 chr1 160731766 160732537 CR1-F2 915 - 160731766 160732537 0 2 739,32, 0,739, -,-, 111383 LINE CR1 1811 chr1 160733959 160734751 CR1-Y1_Aves 318 - 160733959 160734751 0 2 215,103, 0,689, -,-, 111387 LINE CR1 1811 chr1 160748308 160749580 GGLTR5B 450 - 160748308 160749580 0 2 83,280, 0,992, -,-, 111418 LTR ERVL 1811 chr1 160749692 160749993 GGLTR5A 402 + 160749692 160749993 0 2 31,244, 0,57, +,+, 111426 LTR ERVL 1811 chr1 160757332 160759858 ENS1-int 861 - 160757332 160759858 0 2 1975,551, 0,1975, -,-, 111435 LTR ERVL 1811 chr1 160765450 160766853 GGLTR8B 466 - 160765450 160766853 0 2 111,599, 0,804, -,-, 111443 LTR ERVL 1811 chr1 160774609 160776850 CR1-F 734 - 160774609 160776850 0 2 1266,831, 0,1410, -,-, 111458 LINE CR1 1811 chr1 160779457 160780057 GGLTR5A 253 + 160779457 160780057 0 2 276,118, 0,482, +,+, 111464 LTR ERVL 1811 chr1 160792537 160795980 CR1-F 535 + 160792537 160795980 0 2 1457,1986, 0,1457, +,+, 111483 LINE CR1 1811 chr1 160801636 160802364 CR1-Y2_Aves 266 + 160801636 160802364 0 2 342,386, 0,342, +,+, 111490 LINE CR1 1811 chr1 160807122 160808076 CR1-C4 496 + 160807122 160808076 0 2 752,199, 0,755, +,+, 111495 LINE CR1 1811 chr1 160809716 160810662 CR1-Y4 608 - 160809716 160810662 0 3 323,130,37, 0,324,909, -,-,-, 111499 LINE CR1 1811 chr1 160810983 160816889 CR1-C 829 - 160810983 160816889 0 2 1883,2665, 0,3241, -,-, 111501 LINE CR1 1812 chr1 160826158 160827297 CR1-F2 562 + 160826158 160827297 0 2 290,845, 0,294, +,+, 111517 LINE CR1 1812 chr1 160829999 160832138 CR1-Y2_Aves 83 + 160829999 160832138 0 2 422,266, 0,1873, +,+, 111522 LINE CR1 1812 chr1 160836736 160838145 CR1-Y4 519 - 160836736 160838145 0 2 300,1109, 0,300, -,-, 111536 LINE CR1 1812 chr1 160850983 160852747 CR1-Y1_Aves 316 - 160850983 160852747 0 2 890,874, 0,890, -,-, 111555 LINE CR1 1812 chr1 160870844 160871707 CR1-E 721 - 160870844 160871707 0 2 143,210, 0,653, -,-, 111581 LINE CR1 1812 chr1 160905057 160906485 GGLTR3D 563 + 160905057 160906485 0 2 636,792, 0,636, +,+, 111639 LTR ERVL 1812 chr1 160907137 160910779 ENS1B-LTR 692 + 160907137 160910779 0 2 152,107, 0,3535, +,+, 111641 LTR ERVL 1812 chr1 160907289 160910672 GGLTR10D 909 - 160907289 160910672 0 3 345,2693,345, 0,345,3038, -,-,-, 111642 LTR ERVK 1812 chr1 160911116 160914795 CR1-F2 632 - 160911116 160914795 0 3 676,131,80, 0,3468,3599, -,-,-, 111645 LINE CR1 1812 chr1 160932242 160932706 GGLTR5A 281 - 160932242 160932706 0 2 123,172, 0,292, -,-, 111674 LTR ERVL 1812 chr1 160942963 160943837 GGLTR12B 635 - 160942963 160943837 0 2 211,646, 0,228, -,-, 111688 LTR ERVL 1812 chr1 160946455 160947128 CR1-Y2 547 + 160946455 160947128 0 3 159,154,65, 0,159,608, +,+,+, 111693 LINE CR1 1812 chr1 160952642 160955444 GGERV30_LTR 651 + 160952642 160955444 0 4 292,1608,603,294, 0,297,1905,2508, +,+,+,+, 111707 LTR ERVL 1813 chr1 160965304 160966904 CR1-F2 498 + 160965304 160966904 0 2 624,974, 0,626, +,+, 111716 LINE CR1 1813 chr1 160968180 160969287 CR1-D 426 - 160968180 160969287 0 2 192,915, 0,192, -,-, 111719 LINE CR1 1813 chr1 160969701 160970043 GGLTR5A 356 + 160969701 160970043 0 2 123,177, 0,165, +,+, 111720 LTR ERVL 1813 chr1 160991618 160993703 CR1-D2 545 - 160991618 160993703 0 3 752,74,1259, 0,752,826, -,-,-, 111757 LINE CR1 1813 chr1 161000858 161002202 CR1-D2 378 - 161000858 161002202 0 2 393,422, 0,922, -,-, 111767 LINE CR1 1813 chr1 161008051 161008983 CR1-C4 547 + 161008051 161008983 0 2 317,170, 0,762, +,+, 111775 LINE CR1 1813 chr1 161008368 161008795 GGLTR3C2 300 + 161008368 161008795 0 2 263,90, 0,337, +,+, 111776 LTR ERVL 1813 chr1 161021991 161022988 CR1-D 639 - 161021991 161022988 0 3 312,471,159, 0,312,838, -,-,-, 111795 LINE CR1 1813 chr1 161024116 161025859 CR1-Y2_Aves 173 + 161024116 161025859 0 2 250,408, 0,1335, +,+, 111799 LINE CR1 1813 chr1 161024380 161025461 CR1-F2 465 + 161024380 161025461 0 3 69,331,372, 0,72,709, +,+,+, 111800 LINE CR1 1813 chr1 161028489 161031162 CR1-C 812 + 161028489 161031162 0 2 1596,233, 0,2440, +,+, 111805 LINE CR1 1813 chr1 161037538 161037975 CR1-Y4 275 + 161037538 161037975 0 2 240,139, 0,298, +,+, 111814 LINE CR1 1813 chr1 161041115 161041627 GGLTR5B 546 + 161041115 161041627 0 2 406,81, 0,431, +,+, 111822 LTR ERVL 1813 chr1 161042241 161044741 GGLTR3F2 817 - 161042241 161044741 0 3 224,231,1991, 0,278,509, -,-,-, 111825 LTR ERVL 1813 chr1 161080389 161081175 ENS1B-LTR 448 - 161080389 161081175 0 2 361,425, 0,361, -,-, 111875 LTR ERVL 1814 chr1 161088784 161089736 ENS1B-LTR 515 + 161088784 161089736 0 2 108,451, 0,501, +,+, 111889 LTR ERVL 1814 chr1 161110469 161111282 GGLTR3B3 739 - 161110469 161111282 0 2 435,68, 0,745, -,-, 111922 LTR ERVL 1814 chr1 161111859 161112229 CR1-H2 179 - 161111859 161112229 0 2 251,110, 0,260, -,-, 111924 LINE CR1 1814 chr1 161116250 161117107 CR1-C4 488 + 161116250 161117107 0 2 550,277, 0,580, +,+, 111930 LINE CR1 1814 chr1 161124790 161125997 CR1-E 724 + 161124790 161125997 0 2 1119,63, 0,1144, +,+, 111941 LINE CR1 1814 chr1 161144209 161145860 CR1-H2 850 - 161144209 161145860 0 2 856,795, 0,856, -,-, 111963 LINE CR1 1814 chr1 161150486 161150580 A-rich 394 + 161150486 161150580 0 2 31,11, 0,83, +,+, 111966 Low_complexity Low_complexity 1814 chr1 161166727 161168324 CR1-C4 517 + 161166727 161168324 0 2 124,1466, 0,131, +,+, 111986 LINE CR1 1814 chr1 161170177 161170391 GGLTR7B 399 + 161170177 161170391 0 2 104,94, 0,120, +,+, 111992 LTR ERV1 1814 chr1 161172891 161173433 GGERV10_LTR 956 + 161172891 161173433 0 2 322,220, 0,322, +,+, 111996 LTR ERVL 1814 chr1 161175684 161181065 ENS1-int 503 - 161175684 161181065 0 2 55,103, 0,5278, -,-, 112001 LTR ERVL 1814 chr1 161175775 161179474 ENS1-int 511 - 161175775 161179474 0 3 561,1614,919, 0,1162,2780, -,-,-, 112003 LTR ERVL 1814 chr1 161183650 161185270 CR1-F2 580 + 161183650 161185270 0 2 998,620, 0,1000, +,+, 112016 LINE CR1 1814 chr1 161192730 161193905 CR1-D 591 + 161192730 161193905 0 2 207,968, 0,207, +,+, 112026 LINE CR1 1814 chr1 161196371 161197640 CR1-C4 551 + 161196371 161197640 0 3 372,103,139, 0,663,1130, +,+,+, 112029 LINE CR1 1814 chr1 161200515 161200940 GGLTR5A 283 - 161200515 161200940 0 2 109,252, 0,173, -,-, 112037 LTR ERVL 1815 chr1 161238101 161239781 GGLTR7A 859 - 161238101 161239781 0 2 1091,589, 0,1091, -,-, 112078 LTR ERV1 1815 chr1 161240394 161240598 CR1-Y1_Aves 312 + 161240394 161240598 0 2 84,120, 0,84, +,+, 112079 LINE CR1 1815 chr1 161243109 161251497 CR1-D 511 - 161243109 161251497 0 3 1243,364,1165, 0,5954,7223, -,-,-, 112083 LINE CR1 1815 chr1 161244371 161245857 CR1-C 792 - 161244371 161245857 0 2 251,1235, 0,251, -,-, 112084 LINE CR1 1815 chr1 161245855 161249063 CR1-F2 837 - 161245855 161249063 0 2 661,1691, 0,1517, -,-, 112085 LINE CR1 1815 chr1 161249427 161250332 GGLTR12C 565 - 161249427 161250332 0 2 211,673, 0,232, -,-, 112087 LTR ERVL 1815 chr1 161256200 161256815 CR1-E 427 + 161256200 161256815 0 2 71,544, 0,71, +,+, 112098 LINE CR1 1815 chr1 161265735 161266223 GGLTR5A 307 - 161265735 161266223 0 2 79,320, 0,168, -,-, 112109 LTR ERVL 1815 chr1 161267205 161268269 GGLTR12C 559 - 161267205 161268269 0 2 261,450, 0,614, -,-, 112112 LTR ERVL 1815 chr1 161269185 161269675 GGLTR5A 460 + 161269185 161269675 0 2 272,41, 0,449, +,+, 112116 LTR ERVL 1815 chr1 161271614 161275411 GGERVL18-int 421 - 161271614 161275411 0 4 287,980,264,2231, 0,294,1274,1566, -,-,-,-, 112122 LTR ERVL 1815 chr1 161275871 161284301 CR1-C 819 + 161275871 161284301 0 2 2456,148, 0,8282, +,+, 112124 LINE CR1 1815 chr1 161278327 161284152 GGERV10_LTR 945 - 161278327 161284152 0 3 220,5384,220, 0,220,5605, -,-,-, 112125 LTR ERVL 1815 chr1 161285513 161288895 GGLTR10B 938 - 161285513 161288895 0 3 381,2615,381, 0,384,3001, -,-,-, 112128 LTR ERVK 1815 chr1 161311189 161312495 CR1-D2 649 + 161311189 161312495 0 2 91,98, 0,1208, +,+, 112157 LINE CR1 1815 chr1 161348018 161348672 GGLTR5B 137 - 161348018 161348672 0 2 218,419, 0,235, -,-, 112215 LTR ERVL 1816 chr1 161350859 161352790 ENS3-int 415 - 161350859 161352790 0 3 1011,280,383, 0,1011,1548, -,-,-, 112219 LTR ERVL 1816 chr1 161354147 161357867 GGLTR12A 502 - 161354147 161357867 0 2 99,209, 0,3511, -,-, 112223 LTR ERVL 1816 chr1 161363401 161365456 Charlie12_GG 360 - 161363401 161365456 0 3 1277,541,202, 0,1309,1853, -,-,-, 112234 DNA hAT-Charlie 1816 chr1 161397981 161399590 GGLTR12C 677 - 161397981 161399590 0 2 314,404, 0,1205, -,-, 112271 LTR ERVL 1816 chr1 161413925 161414597 GGLTR5B 367 + 161413925 161414597 0 2 38,606, 0,66, +,+, 112294 LTR ERVL 1816 chr1 161426064 161426351 CR1-C4 560 - 161426064 161426351 0 2 188,99, 0,188, -,-, 112316 LINE CR1 1816 chr1 161467863 161468028 GGLTR5B 526 - 161467863 161468028 0 2 108,57, 0,108, -,-, 112380 LTR ERVL 1817 chr1 161497277 161499140 CR1-C3 500 - 161497277 161499140 0 2 415,226, 0,1637, -,-, 112420 LINE CR1 1817 chr1 161499198 161499933 ENS1B-LTR 389 + 161499198 161499933 0 2 57,427, 0,308, +,+, 112423 LTR ERVL 1817 chr1 161506717 161507203 GGLTR8B 149 + 161506717 161507203 0 2 163,323, 0,163, +,+, 112439 LTR ERVL 1817 chr1 161535107 161541016 CR1-Y4 554 + 161535107 161541016 0 2 1201,87, 0,5822, +,+, 112484 LINE CR1 1817 chr1 161536333 161540893 CR1-C 820 + 161536333 161540893 0 2 2043,2471, 0,2089, +,+, 112485 LINE CR1 1817 chr1 161543161 161543715 GGLTR3D 203 + 161543161 161543715 0 2 383,170, 0,384, +,+, 112489 LTR ERVL 1817 chr1 161570766 161571434 GGLTR3B2 638 + 161570766 161571434 0 2 345,207, 0,461, +,+, 112515 LTR ERVL 1817 chr1 161595248 161596875 CR1-Y1_Aves 456 - 161595248 161596875 0 4 385,222,92,160, 0,947,1281,1467, -,-,-,-, 112551 LINE CR1 1817 chr1 161600722 161601401 CR1-Y2_Aves 223 + 161600722 161601401 0 2 196,167, 0,512, +,+, 112560 LINE CR1 1818 chr1 161642053 161644362 CR1-C4 451 + 161642053 161644362 0 2 1121,594, 0,1715, +,+, 112619 LINE CR1 1818 chr1 161651860 161652475 CR1-Y1_Aves 470 - 161651860 161652475 0 2 288,326, 0,289, -,-, 112627 LINE CR1 1818 chr1 161676105 161682295 CR1-C3 631 + 161676105 161682295 0 2 177,114, 0,6076, +,+, 112660 LINE CR1 1818 chr1 161691550 161692255 GGLTR5A 502 - 161691550 161692255 0 2 267,93, 0,612, -,-, 112678 LTR ERVL 1818 chr1 161694685 161695253 CR1-Y2_Aves 339 - 161694685 161695253 0 2 84,177, 0,391, -,-, 112681 LINE CR1 1818 chr1 161696782 161697903 GGLTR8B 324 + 161696782 161697903 0 4 80,273,164,274, 0,85,660,847, +,+,+,+, 112684 LTR ERVL 1818 chr1 161711459 161711818 GGLTR5B 295 + 161711459 161711818 0 2 85,145, 0,214, +,+, 112699 LTR ERVL 1819 chr1 161746369 161747727 CR1-E 734 - 161746369 161747727 0 2 151,331, 0,1027, -,-, 112742 LINE CR1 1819 chr1 161748419 161749051 CR1-Y2_Aves 124 + 161748419 161749051 0 2 129,193, 0,439, +,+, 112745 LINE CR1 1819 chr1 161774942 161775511 (CCCTAA)n 536 + 161774942 161775511 0 3 178,174,180, 0,190,389, +,+,+, 112775 Simple_repeat Simple_repeat 1819 chr1 161775958 161776822 (CCCTAA)n 582 + 161775958 161776822 0 2 669,182, 0,682, +,+, 112778 Simple_repeat Simple_repeat 1819 chr1 161776918 161777613 (CCCTAA)n 554 + 161776918 161777613 0 3 234,14,91, 0,408,604, +,+,+, 112780 Simple_repeat Simple_repeat 1819 chr1 161798084 161799094 CR1-X2 156 - 161798084 161799094 0 2 728,282, 0,728, -,-, 112812 LINE CR1 1819 chr1 161816869 161817289 GGLTR5B 332 - 161816869 161817289 0 2 139,75, 0,345, -,-, 112828 LTR ERVL 1819 chr1 161836223 161837129 CR1-E 450 + 161836223 161837129 0 2 664,194, 0,712, +,+, 112844 LINE CR1 1819 chr1 161867376 161868900 CR1-Y1_Aves 447 + 161867376 161868900 0 2 315,226, 0,1298, +,+, 112879 LINE CR1 1819 chr1 161867691 161868072 GGLTR5A 575 + 161867691 161868072 0 2 308,73, 0,308, +,+, 112880 LTR ERVL 1820 chr1 161876462 161878339 CR1-Y3 652 + 161876462 161878339 0 2 1458,419, 0,1458, +,+, 112887 LINE CR1 1820 chr1 161893391 161904899 ENS1-LTR 948 + 161893391 161904899 0 7 913,2618,913,2615,913,2619,913, 0,915,3533,4448,7063,7976,10595, +,+,+,+,+,+,+, 112903 LTR ERVL 1820 chr1 161921543 161922611 CR1-F 844 + 161921543 161922611 0 2 309,758, 0,310, +,+, 112929 LINE CR1 1820 chr1 161933192 161934577 CR1-F2 796 + 161933192 161934577 0 2 588,431, 0,954, +,+, 112942 LINE CR1 1820 chr1 161938689 161939050 CR1-C4 322 - 161938689 161939050 0 2 141,52, 0,309, -,-, 112948 LINE CR1 1820 chr1 161939192 161941169 CR1-Y4 150 - 161939192 161941169 0 2 1066,605, 0,1372, -,-, 112951 LINE CR1 1820 chr1 161947225 161950310 CR1-X2 483 + 161947225 161950310 0 3 770,552,71, 0,1358,3014, +,+,+, 112959 LINE CR1 1820 chr1 161949139 161950239 GGLTR5A 548 + 161949139 161950239 0 2 482,116, 0,984, +,+, 112961 LTR ERVL 1820 chr1 161950831 161952085 GGLTR8A 168 + 161950831 161952085 0 2 245,178, 0,1076, +,+, 112963 LTR ERVL 1820 chr1 161954078 161954188 GGLTR3B4 748 + 161954078 161954188 0 2 70,40, 0,70, +,+, 112968 LTR ERVL 1820 chr1 161973204 161973547 GGLTR8B 479 + 161973204 161973547 0 2 255,60, 0,283, +,+, 112993 LTR ERVL 1820 chr1 161995549 161996256 GGLTR3E3 779 + 161995549 161996256 0 2 397,151, 0,556, +,+, 113016 LTR ERVL 1820 chr1 162002388 162003847 CR1-X 526 + 162002388 162003847 0 2 794,132, 0,1327, +,+, 113023 LINE CR1 1821 chr1 162011453 162014706 ENS3-int 530 - 162011453 162014706 0 2 3064,166, 0,3087, -,-, 113032 LTR ERVL 1821 chr1 162031198 162032157 GGLTR5A 518 - 162031198 162032157 0 2 274,312, 0,647, -,-, 113046 LTR ERVL 1821 chr1 162036923 162037346 Mariner1b_GG 611 - 162036923 162037346 0 2 347,76, 0,347, -,-, 113051 DNA TcMar-Mariner 1821 chr1 162071244 162071735 TguLTR5e 326 + 162071244 162071735 0 2 127,278, 0,213, +,+, 113075 LTR ERVL 1821 chr1 162080515 162083529 CR1-G 368 - 162080515 162083529 0 3 18,806,129, 0,2077,2885, -,-,-, 113085 LINE CR1 1821 chr1 162080533 162083402 CR1-H 792 - 162080533 162083402 0 2 2059,810, 0,2059, -,-, 113086 LINE CR1 1821 chr1 162094340 162094799 CR1-L3B_Croc 220 - 162094340 162094799 0 2 195,116, 0,343, -,-, 113102 LINE CR1 1821 chr1 162115368 162116021 GGLTR11-int 431 + 162115368 162116021 0 2 124,217, 0,436, +,+, 113115 LTR ERV1 1821 chr1 162130678 162132199 GGLTR3G1 688 - 162130678 162132199 0 2 116,368, 0,1153, -,-, 113127 LTR ERVL 1822 chr1 162171755 162172509 CR1-Y1_Aves 356 - 162171755 162172509 0 2 115,408, 0,346, -,-, 113157 LINE CR1 1822 chr1 162220129 162224784 GGLTR3B1 790 + 162220129 162224784 0 2 93,186, 0,4469, +,+, 113205 LTR ERVL 1822 chr1 162220219 162222798 GGERVL-C-int 760 + 162220219 162222798 0 4 450,379,514,521, 0,450,1544,2058, +,+,+,+, 113206 LTR ERVL 1822 chr1 162225272 162226537 CR1-F2 795 - 162225272 162226537 0 2 1183,67, 0,1198, -,-, 113208 LINE CR1 1822 chr1 162235208 162236354 GGLTR3B2 727 + 162235208 162236354 0 2 160,375, 0,771, +,+, 113216 LTR ERVL 1822 chr1 162247320 162249310 GGLTR3B1 774 + 162247320 162249310 0 2 191,300, 0,1690, +,+, 113233 LTR ERVL 1823 chr1 162297619 162298440 CR1-X2 595 + 162297619 162298440 0 2 244,553, 0,268, +,+, 113270 LINE CR1 1823 chr1 162315041 162315567 GGLTR8B 281 + 162315041 162315567 0 2 189,212, 0,314, +,+, 113281 LTR ERVL 1823 chr1 162317075 162317403 CR1-Y4 701 - 162317075 162317403 0 2 49,278, 0,50, -,-, 113282 LINE CR1 1823 chr1 162323658 162324463 CR1-H 804 - 162323658 162324463 0 2 738,67, 0,738, -,-, 113288 LINE CR1 1823 chr1 162327834 162329157 Mariner1b_GG 556 - 162327834 162329157 0 2 351,143, 0,1180, -,-, 113292 DNA TcMar-Mariner 1823 chr1 162330353 162331720 CR1-C 715 - 162330353 162331720 0 2 728,72, 0,1295, -,-, 113295 LINE CR1 1823 chr1 162335727 162336081 TguLTR5e 179 - 162335727 162336081 0 3 31,29,197, 0,123,157, -,-,-, 113300 LTR ERVL 1823 chr1 162366040 162366458 ENS1B-LTR 369 + 162366040 162366458 0 2 146,272, 0,146, +,+, 113328 LTR ERVL 1823 chr1 162373215 162375029 CR1-F2 481 - 162373215 162375029 0 3 834,517,458, 0,839,1356, -,-,-, 113331 LINE CR1 1823 chr1 162383319 162384375 CR1-X2 430 - 162383319 162384375 0 2 176,270, 0,786, -,-, 113344 LINE CR1 1823 chr1 162392104 162392675 CR1-Y2 530 - 162392104 162392675 0 2 222,47, 0,524, -,-, 113351 LINE CR1 1824 chr1 162414922 162415620 CR1-F2 538 + 162414922 162415620 0 2 198,494, 0,204, +,+, 113366 LINE CR1 1824 chr1 162417260 162419093 GGERVL18-int 772 - 162417260 162419093 0 4 216,277,258,1082, 0,216,493,751, -,-,-,-, 113373 LTR ERVL 1824 chr1 162419087 162420030 GGLTR3G1 649 - 162419087 162420030 0 3 673,69,201, 0,673,742, -,-,-, 113374 LTR ERVL 1824 chr1 162429387 162433867 GGLTR3B1 684 + 162429387 162433867 0 2 3967,513, 0,3967, +,+, 113382 LTR ERVL 1824 chr1 162482016 162483127 CR1-G 501 + 162482016 162483127 0 2 521,294, 0,817, +,+, 113425 LINE CR1 1824 chr1 162494058 162494895 GGLTR8B 428 - 162494058 162494895 0 2 653,161, 0,676, -,-, 113437 LTR ERVL 1825 chr1 162552296 162552954 CR1-Y2_Aves 392 - 162552296 162552954 0 2 394,220, 0,438, -,-, 113476 LINE CR1 1825 chr1 162602795 162605063 CR1-C4 582 - 162602795 162605063 0 2 692,1576, 0,692, -,-, 113519 LINE CR1 1825 chr1 162606159 162606458 TguLTR5e 387 + 162606159 162606458 0 2 148,109, 0,190, +,+, 113521 LTR ERVL 1825 chr1 162659183 162660046 CR1-E 418 - 162659183 162660046 0 2 565,253, 0,610, -,-, 113551 LINE CR1 1826 chr1 162681639 162682456 CR1-Y1_Aves 327 + 162681639 162682456 0 2 287,530, 0,287, +,+, 113571 LINE CR1 1826 chr1 162690076 162690139 (CTTT)n 516 + 162690076 162690139 0 2 9,6, 0,57, +,+, 113579 Simple_repeat Simple_repeat 1826 chr1 162692980 162695852 CR1-C3 662 + 162692980 162695852 0 3 1268,921,679, 0,1268,2193, +,+,+, 113584 LINE CR1 1826 chr1 162729319 162729807 TguLTR5e 323 - 162729319 162729807 0 2 142,247, 0,241, -,-, 113618 LTR ERVL 1826 chr1 162730256 162735272 CR1-C 812 + 162730256 162735272 0 2 1577,2949, 0,2067, +,+, 113619 LINE CR1 1826 chr1 162741878 162742927 CR1-E 546 + 162741878 162742927 0 2 828,201, 0,848, +,+, 113626 LINE CR1 1826 chr1 162759334 162759418 (T)n 808 + 162759334 162759418 0 2 17,36, 0,48, +,+, 113642 Simple_repeat Simple_repeat 1826 chr1 162777737 162780363 CR1-Y2_Aves 329 - 162777737 162780363 0 4 1403,44,183,216, 0,1403,1469,2410, -,-,-,-, 113662 LINE CR1 1826 chr1 162779413 162780147 GGLTR12C 565 + 162779413 162780147 0 2 99,237, 0,497, +,+, 113664 LTR ERVL 1826 chr1 162785203 162785578 ENS1B-LTR 450 + 162785203 162785578 0 2 125,247, 0,128, +,+, 113670 LTR ERVL 228 chr1 162789686 162791519 GGERVL-C-int 731 - 162789686 162791519 0 2 533,1300, 0,533, -,-, 113674 LTR ERVL 1827 chr1 162823436 162824121 CR1-L3A_Croc 328 + 162823436 162824121 0 2 309,96, 0,589, +,+, 113702 LINE CR1 1827 chr1 162828327 162828965 GGLTR8B 293 + 162828327 162828965 0 2 272,204, 0,434, +,+, 113708 LTR ERVL 1827 chr1 162865574 162865989 GGLTR8B 285 - 162865574 162865989 0 2 230,159, 0,256, -,-, 113744 LTR ERVL 1827 chr1 162872786 162874325 CR1-C4 466 - 162872786 162874325 0 2 71,399, 0,1140, -,-, 113748 LINE CR1 1827 chr1 162920679 162921204 CR1-Y4 425 + 162920679 162921204 0 2 182,343, 0,182, +,+, 113782 LINE CR1 1828 chr1 162923152 162923251 (TCTT)n 332 + 162923152 162923251 0 2 36,13, 0,86, +,+, 113788 Simple_repeat Simple_repeat 1828 chr1 162968596 162972863 CR1-H 833 - 162968596 162972863 0 2 499,272, 0,3995, -,-, 113838 LINE CR1 1828 chr1 162969095 162972555 ENS1-int 846 - 162969095 162972555 0 2 841,2619, 0,841, -,-, 113839 LTR ERVL 1828 chr1 162981605 162983076 CR1-X2 498 + 162981605 162983076 0 2 729,147, 0,1324, +,+, 113856 LINE CR1 1828 chr1 162982334 162982929 GGERV28_LTR 826 + 162982334 162982929 0 2 152,331, 0,264, +,+, 113857 LTR ERVK 1828 chr1 162982486 162982598 ENS1B-LTR 980 + 162982486 162982598 0 2 51,61, 0,51, +,+, 113858 LTR ERVL 1828 chr1 162983872 162984296 CR1-Y2_Aves 271 + 162983872 162984296 0 2 310,114, 0,310, +,+, 113861 LINE CR1 1828 chr1 162988754 162991227 CR1-Y2_Aves 221 + 162988754 162991227 0 3 447,1238,204, 0,535,2269, +,+,+, 113867 LINE CR1 1828 chr1 163005998 163010657 CR1-F2 416 + 163005998 163010657 0 2 3647,470, 0,4189, +,+, 113885 LINE CR1 1828 chr1 163021144 163022864 CR1-C3 655 - 163021144 163022864 0 2 163,1173, 0,547, -,-, 113896 LINE CR1 1829 chr1 163089010 163090663 CR1-Y 490 - 163089010 163090663 0 2 1504,142, 0,1511, -,-, 113978 LINE CR1 1829 chr1 163101190 163102699 CR1-Y1_Aves 230 + 163101190 163102699 0 4 481,458,149,290, 0,507,1064,1219, +,+,+,+, 113987 LINE CR1 1829 chr1 163138485 163138997 CR1-Y 379 + 163138485 163138997 0 2 150,233, 0,279, +,+, 114031 LINE CR1 1829 chr1 163144673 163147128 CR1-F0 800 - 163144673 163147128 0 2 400,2055, 0,400, -,-, 114041 LINE CR1 1829 chr1 163148141 163148589 CR1-C3 626 + 163148141 163148589 0 2 389,24, 0,424, +,+, 114044 LINE CR1 1829 chr1 163150028 163150593 CR1-D 492 + 163150028 163150593 0 2 177,387, 0,178, +,+, 114047 LINE CR1 1830 chr1 163201502 163205161 CR1-C4 663 - 163201502 163205161 0 2 422,439, 0,3220, -,-, 114098 LINE CR1 1830 chr1 163213853 163216714 CR1-D2 484 - 163213853 163216714 0 2 1205,1104, 0,1757, -,-, 114112 LINE CR1 1830 chr1 163223517 163225673 CR1-Y1_Aves 464 - 163223517 163225673 0 2 393,106, 0,2050, -,-, 114121 LINE CR1 1830 chr1 163234658 163237560 ENS1-int 630 + 163234658 163237560 0 3 769,387,1735, 0,773,1167, +,+,+, 114135 LTR ERVL 1830 chr1 163266234 163266861 GGLTR5A 303 + 163266234 163266861 0 2 280,316, 0,311, +,+, 114173 LTR ERVL 1830 chr1 163284877 163285300 CR1-F 876 + 163284877 163285300 0 2 84,339, 0,84, +,+, 114205 LINE CR1 1830 chr1 163286671 163288653 CR1-F 874 - 163286671 163288653 0 2 789,1193, 0,789, -,-, 114208 LINE CR1 1830 chr1 163301472 163302233 GGLTR8B 213 - 163301472 163302233 0 2 219,476, 0,285, -,-, 114219 LTR ERVL 1831 chr1 163316199 163317258 ENS1B-LTR 515 + 163316199 163317258 0 3 262,307,110, 0,267,949, +,+,+, 114242 LTR ERVL 1831 chr1 163340992 163341860 CR1-Y2_Aves 114 + 163340992 163341860 0 2 478,313, 0,555, +,+, 114266 LINE CR1 1831 chr1 163342271 163342989 (CCCTAA)n 584 + 163342271 163342989 0 2 349,357, 0,361, +,+, 114267 Simple_repeat Simple_repeat 1831 chr1 163389225 163389758 GGLTR8B 383 - 163389225 163389758 0 2 192,169, 0,364, -,-, 114311 LTR ERVL 1831 chr1 163395613 163396844 CR1-C 827 + 163395613 163396844 0 3 348,255,628, 0,348,603, +,+,+, 114318 LINE CR1 1831 chr1 163400238 163404751 CR1-H 705 - 163400238 163404751 0 3 1630,1054,1667, 0,1785,2846, -,-,-, 114321 LINE CR1 1831 chr1 163407059 163407548 CR1-G 552 + 163407059 163407548 0 2 97,62, 0,427, +,+, 114324 LINE CR1 1831 chr1 163407226 163407486 GGLTR10C2 621 - 163407226 163407486 0 2 166,82, 0,178, -,-, 114326 LTR ERVK 1831 chr1 163408077 163412240 CR1-D 208 + 163408077 163412240 0 2 149,4008, 0,155, +,+, 114327 LINE CR1 1831 chr1 163414836 163415356 CR1-C4 603 + 163414836 163415356 0 2 154,366, 0,154, +,+, 114331 LINE CR1 1831 chr1 163430862 163431082 GGLTR3B4 855 + 163430862 163431082 0 2 77,43, 0,177, +,+, 114357 LTR ERVL 1832 chr1 163558881 163559334 GGLTR8A 332 + 163558881 163559334 0 2 140,200, 0,253, +,+, 114504 LTR ERVL 1832 chr1 163570777 163571904 CR1-D 639 - 163570777 163571904 0 2 281,78, 0,1049, -,-, 114515 LINE CR1 1832 chr1 163571058 163571810 ENS1B-LTR 154 - 163571058 163571810 0 2 413,314, 0,438, -,-, 114516 LTR ERVL 1833 chr1 163611259 163612025 CR1-C3 680 + 163611259 163612025 0 2 390,376, 0,390, +,+, 114563 LINE CR1 1833 chr1 163619242 163619819 Char12Mar1_GG 628 + 163619242 163619819 0 2 510,41, 0,536, +,+, 114569 DNA hAT-Charlie 1833 chr1 163641982 163642214 GGLTR3B1 802 - 163641982 163642214 0 2 101,131, 0,101, -,-, 114592 LTR ERVL 1833 chr1 163666632 163670213 Char12Mar1_GG 581 - 163666632 163670213 0 2 60,487, 0,3094, -,-, 114618 DNA hAT-Charlie 1833 chr1 163666888 163668550 CR1-H 846 - 163666888 163668550 0 2 1585,77, 0,1585, -,-, 114620 LINE CR1 1833 chr1 163675999 163676072 A-rich 268 + 163675999 163676072 0 2 35,11, 0,62, +,+, 114627 Low_complexity Low_complexity 1833 chr1 163690728 163691567 GGLTR8B 522 - 163690728 163691567 0 2 717,122, 0,717, -,-, 114648 LTR ERVL 1833 chr1 163699620 163700946 CR1-D2 701 - 163699620 163700946 0 2 677,182, 0,1144, -,-, 114660 LINE CR1 1834 chr1 163711239 163711687 GGLTR5A 545 + 163711239 163711687 0 2 132,300, 0,148, +,+, 114671 LTR ERVL 1834 chr1 163724770 163726800 CR1-L3B_Croc 205 + 163724770 163726800 0 2 265,380, 0,1650, +,+, 114690 LINE CR1 1834 chr1 163745881 163746928 CR1-E 711 + 163745881 163746928 0 2 626,415, 0,632, +,+, 114721 LINE CR1 1834 chr1 163747849 163749836 CR1-D2 596 + 163747849 163749836 0 2 1679,308, 0,1679, +,+, 114723 LINE CR1 1834 chr1 163753746 163754150 GGLTR3A 604 + 163753746 163754150 0 3 178,56,131, 0,179,273, +,+,+, 114726 LTR ERVL 1834 chr1 163762413 163762493 (TTTTA)n 364 + 163762413 163762493 0 2 41,6, 0,74, +,+, 114738 Simple_repeat Simple_repeat 1834 chr1 163782111 163783104 CR1-C4 353 - 163782111 163783104 0 2 109,681, 0,312, -,-, 114762 LINE CR1 1834 chr1 163793249 163799296 Char12Mar1_GG 610 - 163793249 163799296 0 3 48,386,195, 0,48,5852, -,-,-, 114780 DNA hAT-Charlie 1834 chr1 163796868 163799106 CR1-D2 575 + 163796868 163799106 0 2 240,442, 0,1796, +,+, 114785 LINE CR1 1834 chr1 163797117 163798663 CR1-C2 768 - 163797117 163798663 0 2 344,472, 0,1074, -,-, 114786 LINE CR1 1834 chr1 163802811 163804625 CR1-H 823 + 163802811 163804625 0 3 906,860,47, 0,906,1767, +,+,+, 114792 LINE CR1 1834 chr1 163805563 163806156 CR1-Y2_Aves 274 + 163805563 163806156 0 2 238,325, 0,268, +,+, 114794 LINE CR1 1834 chr1 163823051 163823729 GGLTR8B 332 - 163823051 163823729 0 2 593,85, 0,593, -,-, 114822 LTR ERVL 1835 chr1 163855169 163855885 CR1-F2 518 - 163855169 163855885 0 2 409,307, 0,409, -,-, 114863 LINE CR1 1835 chr1 163889189 163889305 A-rich 360 + 163889189 163889305 0 2 56,31, 0,85, +,+, 114904 Low_complexity Low_complexity 1835 chr1 163893984 163894752 CR1-X 106 + 163893984 163894752 0 2 573,165, 0,603, +,+, 114919 LINE CR1 1835 chr1 163895169 163895853 CR1-Y2 374 + 163895169 163895853 0 2 417,266, 0,418, +,+, 114922 LINE CR1 1835 chr1 163901453 163902140 CR1-Y4 567 + 163901453 163902140 0 3 91,416,180, 0,91,507, +,+,+, 114927 LINE CR1 1835 chr1 163905337 163906346 CR1-H2 522 - 163905337 163906346 0 2 68,132, 0,877, -,-, 114931 LINE CR1 1835 chr1 163907376 163907782 GGLTR5A 404 - 163907376 163907782 0 2 171,235, 0,171, -,-, 114935 LTR ERVL 1835 chr1 163909699 163912175 CR1-Y1_Aves 344 - 163909699 163912175 0 2 140,1093, 0,1383, -,-, 114938 LINE CR1 1835 chr1 163916860 163917334 CR1-C4 483 + 163916860 163917334 0 2 257,187, 0,287, +,+, 114952 LINE CR1 1835 chr1 163919408 163919991 GGERVL-A-int 796 + 163919408 163919991 0 2 222,361, 0,222, +,+, 114955 LTR ERVL 1835 chr1 163946134 163947208 CR1-D2 223 - 163946134 163947208 0 2 81,889, 0,185, -,-, 115000 LINE CR1 1835 chr1 163969199 163970246 CR1-C3 596 - 163969199 163970246 0 2 704,343, 0,704, -,-, 115034 LINE CR1 1836 chr1 163978174 163984144 GGERVK1-int 931 + 163978174 163984144 0 4 241,4063,1413,240, 0,241,4317,5730, +,+,+,+, 115042 LTR ERVK 1836 chr1 163988836 163989375 CR1-Y4 477 - 163988836 163989375 0 2 310,229, 0,310, -,-, 115050 LINE CR1 1836 chr1 163994529 163995301 CR1-D 244 + 163994529 163995301 0 3 154,62,529, 0,181,243, +,+,+, 115062 LINE CR1 1836 chr1 164006276 164006757 CR1-Y1_Aves 479 - 164006276 164006757 0 3 71,65,310, 0,74,171, -,-,-, 115075 LINE CR1 1836 chr1 164016993 164019422 CR1-D 566 + 164016993 164019422 0 2 999,1397, 0,1032, +,+, 115091 LINE CR1 1836 chr1 164034249 164036408 CR1-F2 653 - 164034249 164036408 0 2 235,68, 0,2091, -,-, 115112 LINE CR1 1836 chr1 164039239 164039933 CR1-Y1_Aves 424 - 164039239 164039933 0 2 158,236, 0,458, -,-, 115121 LINE CR1 1836 chr1 164043783 164044032 CR1-B 396 - 164043783 164044032 0 2 53,171, 0,78, -,-, 115125 LINE CR1 1836 chr1 164046706 164047344 Char12Mar1_GG 466 - 164046706 164047344 0 2 430,137, 0,501, -,-, 115132 DNA hAT-Charlie 1836 chr1 164055635 164057771 CR1-E 714 + 164055635 164057771 0 2 870,637, 0,1499, +,+, 115146 LINE CR1 1836 chr1 164060315 164062158 CR1-D 696 + 164060315 164062158 0 2 131,766, 0,1077, +,+, 115152 LINE CR1 1836 chr1 164085898 164085959 (GTT)n 448 + 164085898 164085959 0 2 6,32, 0,29, +,+, 115182 Simple_repeat Simple_repeat 1837 chr1 164115998 164116521 CR1-C4 304 + 164115998 164116521 0 2 130,272, 0,251, +,+, 115224 LINE CR1 1837 chr1 164118120 164119048 CR1-F2 586 - 164118120 164119048 0 2 94,445, 0,483, -,-, 115229 LINE CR1 1837 chr1 164119049 164119135 (TTTG)n 342 + 164119049 164119135 0 2 41,10, 0,76, +,+, 115231 Simple_repeat Simple_repeat 1837 chr1 164122705 164127062 CR1-X2 334 + 164122705 164127062 0 3 57,290,445, 0,3041,3912, +,+,+, 115236 LINE CR1 1837 chr1 164127496 164127795 ENS1-LTR 957 - 164127496 164127795 0 2 82,216, 0,83, -,-, 115245 LTR ERVL 1837 chr1 164128264 164129466 TguLTR5e 220 + 164128264 164129466 0 2 361,239, 0,963, +,+, 115247 LTR ERVL 1837 chr1 164135258 164135353 (T)n 775 + 164135258 164135353 0 2 28,38, 0,57, +,+, 115258 Simple_repeat Simple_repeat 1837 chr1 164140346 164140919 GGLTR3A 869 + 164140346 164140919 0 2 529,44, 0,529, +,+, 115267 LTR ERVL 1837 chr1 164148467 164149682 CR1-E 374 + 164148467 164149682 0 2 703,512, 0,703, +,+, 115278 LINE CR1 1837 chr1 164165775 164166455 GGLTR11-int 256 + 164165775 164166455 0 3 142,128,164, 0,306,516, +,+,+, 115289 LTR ERV1 1837 chr1 164171244 164171742 GGLTR3G2 410 + 164171244 164171742 0 2 360,109, 0,389, +,+, 115302 LTR ERVL 1837 chr1 164180925 164182063 Char12Mar1_GG 477 - 164180925 164182063 0 2 148,438, 0,700, -,-, 115320 DNA hAT-Charlie 1837 chr1 164183495 164185172 GGERVL-C-int 773 - 164183495 164185172 0 2 499,1178, 0,499, -,-, 115323 LTR ERVL 1837 chr1 164185169 164189890 GGERVL-A-int 750 - 164185169 164189890 0 2 688,644, 0,4077, -,-, 115324 LTR ERVL 1837 chr1 164185857 164189243 GGLTR10B 898 - 164185857 164189243 0 3 383,2592,383, 0,386,3003, -,-,-, 115325 LTR ERVK 1837 chr1 164189896 164190946 GGLTR3A 653 + 164189896 164190946 0 2 358,218, 0,832, +,+, 115326 LTR ERVL 1837 chr1 164204590 164206837 GGERVL-C-int 733 - 164204590 164206837 0 3 543,1178,526, 0,543,1721, -,-,-, 115344 LTR ERVL 1837 chr1 164229188 164231153 CR1-Y2_Aves 340 + 164229188 164231153 0 2 241,54, 0,1911, +,+, 115378 LINE CR1 1838 chr1 164235715 164239139 CR1-E 706 - 164235715 164239139 0 3 203,1006,118, 0,1757,3306, -,-,-, 115392 LINE CR1 1838 chr1 164241633 164242342 CR1-H 769 + 164241633 164242342 0 2 445,264, 0,445, +,+, 115404 LINE CR1 1838 chr1 164246282 164247791 CR1-H2 896 + 164246282 164247791 0 2 919,44, 0,1465, +,+, 115409 LINE CR1 1838 chr1 164250047 164252213 CR1-E 724 + 164250047 164252213 0 2 409,203, 0,1963, +,+, 115421 LINE CR1 1838 chr1 164270466 164270523 (TTTT)n 252 + 164270466 164270523 0 2 6,15, 0,42, +,+, 115455 Simple_repeat Simple_repeat 1838 chr1 164286122 164286448 CR1-C 849 + 164286122 164286448 0 2 99,227, 0,99, +,+, 115473 LINE CR1 1838 chr1 164298733 164299100 CR1-C 768 - 164298733 164299100 0 2 311,56, 0,311, -,-, 115484 LINE CR1 1838 chr1 164301760 164302747 GGLTR8B 258 - 164301760 164302747 0 3 132,534,120, 0,283,867, -,-,-, 115489 LTR ERVL 1838 chr1 164306812 164307723 CR1-C4 495 + 164306812 164307723 0 2 272,639, 0,272, +,+, 115495 LINE CR1 1838 chr1 164310443 164311241 CR1-Y2_Aves 238 - 164310443 164311241 0 3 69,223,217, 0,134,581, -,-,-, 115502 LINE CR1 1838 chr1 164313987 164314586 GGLTR3G2 617 + 164313987 164314586 0 2 507,60, 0,539, +,+, 115510 LTR ERVL 1838 chr1 164316015 164318190 CR1-C3 373 - 164316015 164318190 0 2 1117,132, 0,2043, -,-, 115514 LINE CR1 1838 chr1 164327196 164327891 CR1-D2 528 - 164327196 164327891 0 2 458,237, 0,458, -,-, 115528 LINE CR1 1838 chr1 164333470 164339320 CR1-C2 712 - 164333470 164339320 0 2 819,3813, 0,2037, -,-, 115535 LINE CR1 1838 chr1 164334577 164335507 ENS3-int 926 + 164334577 164335507 0 2 93,837, 0,93, +,+, 115537 LTR ERVL 1838 chr1 164343631 164344931 CR1-D2 491 + 164343631 164344931 0 2 212,1083, 0,217, +,+, 115546 LINE CR1 1838 chr1 164357455 164359081 TguLTR5e 305 - 164357455 164359081 0 3 202,117,115, 0,395,1511, -,-,-, 115576 LTR ERVL 229 chr1 164361402 164364368 Char12Mar1_GG 729 - 164361402 164364368 0 2 127,234, 0,2732, -,-, 115581 DNA hAT-Charlie 1839 chr1 164365416 164366058 CR1-C 839 + 164365416 164366058 0 2 60,582, 0,60, +,+, 115588 LINE CR1 1839 chr1 164368357 164368493 A-rich 561 + 164368357 164368493 0 2 72,47, 0,89, +,+, 115594 Low_complexity Low_complexity 1839 chr1 164373165 164373664 CR1-Y4 498 + 164373165 164373664 0 2 193,295, 0,204, +,+, 115603 LINE CR1 1839 chr1 164374671 164374736 (CATTTT)n 348 + 164374671 164374736 0 2 10,8, 0,57, +,+, 115604 Simple_repeat Simple_repeat 1839 chr1 164388646 164389407 GGLTR8B 236 - 164388646 164389407 0 2 164,310, 0,451, -,-, 115627 LTR ERVL 1839 chr1 164399258 164403085 CR1-E 473 + 164399258 164403085 0 2 1528,54, 0,3773, +,+, 115644 LINE CR1 1839 chr1 164401265 164401818 CR1-X2 526 + 164401265 164401818 0 2 170,378, 0,175, +,+, 115647 LINE CR1 1839 chr1 164405187 164407970 CR1-D2 558 - 164405187 164407970 0 2 304,139, 0,2644, -,-, 115650 LINE CR1 1839 chr1 164465944 164467184 Char12Mar1_GG 375 - 164465944 164467184 0 3 75,313,160, 0,110,1080, -,-,-, 115736 DNA hAT-Charlie 229 chr1 164492483 164496013 Mariner1_GG 538 - 164492483 164496013 0 4 144,105,424,600, 0,178,535,2930, -,-,-,-, 115778 DNA TcMar-Mariner 1840 chr1 164503684 164505515 CR1-X2 435 + 164503684 164505515 0 3 424,356,1051, 0,424,780, +,+,+, 115793 LINE CR1 1840 chr1 164510836 164511695 CR1-E 269 - 164510836 164511695 0 2 482,346, 0,513, -,-, 115799 LINE CR1 1840 chr1 164514564 164519538 CR1-Y1_Aves 351 - 164514564 164519538 0 2 421,642, 0,4332, -,-, 115805 LINE CR1 1840 chr1 164526496 164527440 CR1-Y1_Aves 316 + 164526496 164527440 0 2 494,106, 0,838, +,+, 115818 LINE CR1 1840 chr1 164535284 164536019 CR1-D2 404 - 164535284 164536019 0 2 517,187, 0,548, -,-, 115832 LINE CR1 1840 chr1 164540387 164540784 (GGGAA)n 956 + 164540387 164540784 0 2 184,180, 0,217, +,+, 115842 Simple_repeat Simple_repeat 1840 chr1 164544794 164545019 GGLTR5B 579 - 164544794 164545019 0 2 49,176, 0,49, -,-, 115851 LTR ERVL 1840 chr1 164555100 164555692 GGLTR3C2 538 + 164555100 164555692 0 2 18,536, 0,56, +,+, 115869 LTR ERVL 1840 chr1 164557116 164558331 CR1-D2 531 - 164557116 164558331 0 3 56,169,350, 0,616,865, -,-,-, 115872 LINE CR1 1840 chr1 164581983 164583288 GGLTR3F1 723 + 164581983 164583288 0 2 493,810, 0,495, +,+, 115913 LTR ERVL 1840 chr1 164593421 164594197 CR1-C2 693 - 164593421 164594197 0 2 495,43, 0,733, -,-, 115929 LINE CR1 1840 chr1 164595883 164599228 GGLTR10B 947 + 164595883 164599228 0 3 382,2576,382, 0,384,2963, +,+,+, 115932 LTR ERVK 1840 chr1 164599240 164602005 CR1-G 830 + 164599240 164602005 0 2 223,2540, 0,225, +,+, 115933 LINE CR1 1840 chr1 164605845 164606440 GGLTR8B 302 + 164605845 164606440 0 2 138,452, 0,143, +,+, 115940 LTR ERVL 1840 chr1 164622392 164623008 Char12Mar1_GG 626 - 164622392 164623008 0 2 114,436, 0,180, -,-, 115961 DNA hAT-Charlie 1841 chr1 164630709 164632195 CR1-Y4 167 - 164630709 164632195 0 2 169,404, 0,1082, -,-, 115970 LINE CR1 1841 chr1 164630886 164631663 CR1-Y2_Aves 118 - 164630886 164631663 0 2 20,561, 0,216, -,-, 115973 LINE CR1 1841 chr1 164639893 164640845 GGLTR8B 334 - 164639893 164640845 0 2 163,482, 0,470, -,-, 115989 LTR ERVL 1841 chr1 164657379 164659811 CR1-X 71 - 164657379 164659811 0 2 1072,1326, 0,1106, -,-, 116014 LINE CR1 1841 chr1 164674705 164675166 CR1-B2 541 + 164674705 164675166 0 2 232,202, 0,259, +,+, 116040 LINE CR1 1841 chr1 164694283 164695479 CR1-D 349 - 164694283 164695479 0 3 33,102,488, 0,548,708, -,-,-, 116064 LINE CR1 1841 chr1 164715100 164715680 Mariner1b_GG 558 - 164715100 164715680 0 2 95,455, 0,125, -,-, 116087 DNA TcMar-Mariner 1841 chr1 164717408 164718869 CR1-C4 648 - 164717408 164718869 0 2 307,395, 0,1066, -,-, 116091 LINE CR1 1841 chr1 164756180 164756560 TguLTR5e 263 - 164756180 164756560 0 2 157,196, 0,184, -,-, 116140 LTR ERVL 1842 chr1 164762041 164762859 GGLTR8A 26 + 164762041 164762859 0 2 656,131, 0,687, +,+, 116148 LTR ERVL 1842 chr1 164774607 164775073 GGLTR6 478 + 164774607 164775073 0 2 314,152, 0,314, +,+, 116169 LTR ERVL 1842 chr1 164796428 164797376 CR1-C3 457 + 164796428 164797376 0 2 163,758, 0,190, +,+, 116204 LINE CR1 1842 chr1 164797875 164798628 GGLTR12C 595 - 164797875 164798628 0 2 343,60, 0,693, -,-, 116206 LTR ERVL 1842 chr1 164803732 164804761 CR1-C4 573 + 164803732 164804761 0 2 622,389, 0,640, +,+, 116214 LINE CR1 1842 chr1 164805985 164807056 CR1-11_Crp 224 - 164805985 164807056 0 2 172,144, 0,927, -,-, 116218 LINE CR1 1842 chr1 164818936 164819594 CR1-F 299 - 164818936 164819594 0 2 171,487, 0,171, -,-, 116239 LINE CR1 1842 chr1 164846587 164847058 TguLTR5e 287 - 164846587 164847058 0 2 161,275, 0,196, -,-, 116277 LTR ERVL 1842 chr1 164857595 164858639 CR1-C4 444 - 164857595 164858639 0 2 839,205, 0,839, -,-, 116293 LINE CR1 1842 chr1 164859477 164859625 A-rich 574 + 164859477 164859625 0 2 41,56, 0,92, +,+, 116294 Low_complexity Low_complexity 1842 chr1 164866219 164866273 (AT)n 798 + 164866219 164866273 0 2 23,9, 0,45, +,+, 116306 Simple_repeat Simple_repeat 1842 chr1 164885812 164885916 (TGTT)n 388 + 164885812 164885916 0 2 17,68, 0,36, +,+, 116326 Simple_repeat Simple_repeat 1843 chr1 164917049 164918223 CR1-H 622 + 164917049 164918223 0 2 424,202, 0,972, +,+, 116362 LINE CR1 1843 chr1 164917470 164918022 CR1-H 858 - 164917470 164918022 0 2 102,122, 0,430, -,-, 116363 LINE CR1 1843 chr1 164924194 164924367 CR1-C 760 - 164924194 164924367 0 2 16,116, 0,57, -,-, 116374 LINE CR1 1843 chr1 164948453 164948799 Char12Mar1_GG 609 - 164948453 164948799 0 2 52,266, 0,80, -,-, 116411 DNA hAT-Charlie 1843 chr1 164964435 164965526 CR1-E 434 + 164964435 164965526 0 2 263,253, 0,838, +,+, 116429 LINE CR1 1843 chr1 164993493 164993539 (TGTTT)n 708 + 164993493 164993539 0 2 12,10, 0,36, +,+, 116470 Simple_repeat Simple_repeat 1844 chr1 165107491 165108896 GGERVL-C-int 770 + 165107491 165108896 0 2 883,522, 0,883, +,+, 116590 LTR ERVL 1844 chr1 165110227 165111102 CR1-D2 583 - 165110227 165111102 0 2 64,811, 0,64, -,-, 116592 LINE CR1 1844 chr1 165113739 165114689 CR1-Y2_Aves 263 + 165113739 165114689 0 2 233,197, 0,753, +,+, 116598 LINE CR1 1844 chr1 165150032 165150470 GGLTR5B 263 + 165150032 165150470 0 2 118,138, 0,300, +,+, 116631 LTR ERVL 1845 chr1 165153984 165156062 CR1-Y3 715 - 165153984 165156062 0 2 695,497, 0,1581, -,-, 116641 LINE CR1 1845 chr1 165202304 165203864 CR1-Y2_Aves 227 - 165202304 165203864 0 2 856,74, 0,1486, -,-, 116695 LINE CR1 1845 chr1 165255976 165256080 (T)n 851 + 165255976 165256080 0 2 23,31, 0,73, +,+, 116745 Simple_repeat Simple_repeat 1845 chr1 165278887 165280609 CR1-C3 680 + 165278887 165280609 0 2 1483,239, 0,1483, +,+, 116771 LINE CR1 1846 chr1 165292252 165294317 CR1-C4 611 + 165292252 165294317 0 2 228,1314, 0,751, +,+, 116782 LINE CR1 1846 chr1 165301115 165303453 CR1-L3A_Croc 241 + 165301115 165303453 0 3 648,382,927, 0,824,1411, +,+,+, 116788 LINE CR1 1846 chr1 165318498 165319605 CR1-F2 331 + 165318498 165319605 0 2 517,356, 0,751, +,+, 116797 LINE CR1 1846 chr1 165346145 165346233 A-rich 444 + 165346145 165346233 0 2 32,33, 0,55, +,+, 116817 Low_complexity Low_complexity 1846 chr1 165375063 165375182 (T)n 625 + 165375063 165375182 0 2 29,38, 0,81, +,+, 116839 Simple_repeat Simple_repeat 1846 chr1 165388539 165389127 CR1-X2 747 + 165388539 165389127 0 2 200,388, 0,200, +,+, 116853 LINE CR1 1846 chr1 165408812 165410913 CR1-Y2_Aves 250 + 165408812 165410913 0 2 809,1287, 0,814, +,+, 116868 LINE CR1 1847 chr1 165417330 165418173 CR1-X1 646 - 165417330 165418173 0 2 68,322, 0,521, -,-, 116874 LINE CR1 1848 chr1 165569051 165570861 CR1-F2 319 + 165569051 165570861 0 2 269,230, 0,1580, +,+, 116974 LINE CR1 1848 chr1 165588410 165591248 CR1-C4 626 - 165588410 165591248 0 2 1046,319, 0,2519, -,-, 116988 LINE CR1 1848 chr1 165588412 165596072 CR1-D2 379 - 165588412 165596072 0 2 18,821, 0,6839, -,-, 116989 LINE CR1 1848 chr1 165589450 165590931 CR1-F2 822 + 165589450 165590931 0 2 515,966, 0,515, +,+, 116990 LINE CR1 1849 chr1 165675073 165675528 REP131 78 - 165675073 165675528 0 2 50,194, 0,261, -,-, 117053 DNA? DNA? 1850 chr1 165869313 165869966 CR1-Y4 270 + 165869313 165869966 0 2 147,370, 0,283, +,+, 117192 LINE CR1 1850 chr1 165900733 165902733 CR1-L3B_Croc 100 + 165900733 165902733 0 2 382,204, 0,1796, +,+, 117211 LINE CR1 1850 chr1 165918599 165918764 CR1-Y1_Aves 287 + 165918599 165918764 0 2 33,132, 0,33, +,+, 117222 LINE CR1 1851 chr1 165985865 165986182 CR1-C3 610 + 165985865 165986182 0 2 192,61, 0,256, +,+, 117260 LINE CR1 1851 chr1 166000000 166000206 CR1-E 468 + 166000000 166000206 0 2 120,86, 0,120, +,+, 117276 LINE CR1 1851 chr1 166038259 166038507 CR1-X2 721 + 166038259 166038507 0 2 57,190, 0,58, +,+, 117300 LINE CR1 1852 chr1 166119890 166121411 CR1-D 628 - 166119890 166121411 0 2 1205,316, 0,1205, -,-, 117364 LINE CR1 1852 chr1 166157277 166157771 CR1-F2 548 - 166157277 166157771 0 3 162,142,190, 0,162,304, -,-,-, 117395 LINE CR1 1852 chr1 166164594 166166010 CR1-Y2_Aves 93 - 166164594 166166010 0 2 449,660, 0,756, -,-, 117400 LINE CR1 1853 chr1 166244246 166245910 CR1-B2 863 + 166244246 166245910 0 2 199,414, 0,1250, +,+, 117478 LINE CR1 1853 chr1 166279976 166280789 CR1-Y2_Aves 283 + 166279976 166280789 0 2 657,109, 0,704, +,+, 117511 LINE CR1 1854 chr1 166377127 166377837 CR1-H 343 + 166377127 166377837 0 2 15,695, 0,15, +,+, 117579 LINE CR1 1855 chr1 166473323 166473418 (T)n 702 + 166473323 166473418 0 2 29,31, 0,64, +,+, 117648 Simple_repeat Simple_repeat 1855 chr1 166500000 166500804 CR1-C4 599 + 166500000 166500804 0 3 585,102,117, 0,585,687, +,+,+, 117672 LINE CR1 1855 chr1 166541719 166542418 OldhAT1 151 - 166541719 166542418 0 2 191,135, 0,564, -,-, 117694 DNA hAT-Ac 1855 chr1 166554561 166557796 CR1-11_Crp 253 + 166554561 166557796 0 3 174,281,90, 0,583,3145, +,+,+, 117706 LINE CR1 1856 chr1 166598964 166599064 A-rich 664 + 166598964 166599064 0 2 60,27, 0,73, +,+, 117733 Low_complexity Low_complexity 1856 chr1 166604696 166606242 Charlie12_GG 612 - 166604696 166606242 0 3 1249,162,104, 0,1249,1442, -,-,-, 117738 DNA hAT-Charlie 1856 chr1 166673085 166675658 CR1-E 510 - 166673085 166675658 0 2 303,200, 0,2373, -,-, 117789 LINE CR1 1856 chr1 166673388 166675460 CR1-G 839 + 166673388 166675460 0 2 486,1586, 0,486, +,+, 117790 LINE CR1 1856 chr1 166677263 166680141 CR1-E 731 + 166677263 166680141 0 2 1702,648, 0,2230, +,+, 117793 LINE CR1 1856 chr1 166716578 166717782 CR1-Y2_Aves 390 + 166716578 166717782 0 4 108,221,82,246, 0,618,876,958, +,+,+,+, 117817 LINE CR1 1857 chr1 166791543 166792128 CR1-C4 622 - 166791543 166792128 0 2 544,41, 0,544, -,-, 117859 LINE CR1 1858 chr1 166875553 166876195 CR1-F2 440 - 166875553 166876195 0 2 369,267, 0,375, -,-, 117915 LINE CR1 1858 chr1 166955903 166956765 CR1-L3A_Croc 210 + 166955903 166956765 0 2 574,261, 0,601, +,+, 117964 LINE CR1 232 chr1 166985581 166986596 Mariner1_GG 355 - 166985581 166986596 0 2 330,685, 0,330, -,-, 117989 DNA TcMar-Mariner 1859 chr1 167007388 167008562 CR1-Y2_Aves 219 + 167007388 167008562 0 2 146,541, 0,633, +,+, 118010 LINE CR1 1859 chr1 167067025 167067319 CR1-C2 832 + 167067025 167067319 0 2 63,231, 0,63, +,+, 118044 LINE CR1 1859 chr1 167111327 167111958 CR1-F2 415 + 167111327 167111958 0 2 380,251, 0,380, +,+, 118067 LINE CR1 1860 chr1 167159380 167160566 CR1-L3B_Croc 103 + 167159380 167160566 0 2 519,369, 0,817, +,+, 118120 LINE CR1 1860 chr1 167194099 167195221 CR1-F2 588 + 167194099 167195221 0 2 594,528, 0,594, +,+, 118146 LINE CR1 1860 chr1 167209705 167210806 CR1-Y2_Aves 169 - 167209705 167210806 0 3 352,126,523, 0,428,578, -,-,-, 118159 LINE CR1 1861 chr1 167257242 167257788 CR1-L3B_Croc 88 + 167257242 167257788 0 2 319,227, 0,319, +,+, 118187 LINE CR1 1861 chr1 167378041 167378571 CR1-F2 616 - 167378041 167378571 0 2 325,202, 0,328, -,-, 118268 LINE CR1 1862 chr1 167385541 167388715 CR1-F2 476 - 167385541 167388715 0 2 147,165, 0,3009, -,-, 118271 LINE CR1 1863 chr1 167562412 167563509 CR1-8_Crp 235 - 167562412 167563509 0 2 135,551, 0,546, -,-, 118378 LINE CR1 1863 chr1 167564872 167566077 Char12Mar1_GG 396 - 167564872 167566077 0 2 1065,138, 0,1067, -,-, 118379 DNA hAT-Charlie 1863 chr1 167637441 167638862 CR1-G 887 + 167637441 167638862 0 2 463,958, 0,463, +,+, 118428 LINE CR1 1864 chr1 167690440 167691822 CR1-L3B_Croc 159 + 167690440 167691822 0 2 871,346, 0,1036, +,+, 118454 LINE CR1 1864 chr1 167698580 167699493 CR1-Y4 563 + 167698580 167699493 0 2 440,266, 0,647, +,+, 118457 LINE CR1 1866 chr1 167923175 167924815 CR1-Y1_Aves 491 - 167923175 167924815 0 2 128,82, 0,1558, -,-, 118618 LINE CR1 1867 chr1 168040853 168042694 CR1-F2 480 - 168040853 168042694 0 2 140,261, 0,1580, -,-, 118686 LINE CR1 1867 chr1 168056725 168057116 CR1-X2 553 - 168056725 168057116 0 2 132,254, 0,137, -,-, 118699 LINE CR1 1867 chr1 168096853 168097411 CR1-D2 567 - 168096853 168097411 0 2 388,170, 0,388, -,-, 118724 LINE CR1 1867 chr1 168124196 168126025 CR1-C4 621 + 168124196 168126025 0 2 285,131, 0,1698, +,+, 118741 LINE CR1 1867 chr1 168124482 168125890 CR1-F2 599 - 168124482 168125890 0 2 701,707, 0,701, -,-, 118742 LINE CR1 1868 chr1 168175393 168176385 CR1-L3B_Croc 198 + 168175393 168176385 0 2 411,313, 0,679, +,+, 118790 LINE CR1 1868 chr1 168270112 168271179 CR1-X2 240 - 168270112 168271179 0 2 448,589, 0,478, -,-, 118859 LINE CR1 1869 chr1 168311766 168312534 CR1-C4 565 + 168311766 168312534 0 2 608,159, 0,609, +,+, 118876 LINE CR1 1869 chr1 168325736 168327279 CR1-F 562 + 168325736 168327279 0 2 306,1237, 0,306, +,+, 118889 LINE CR1 1869 chr1 168345084 168346102 CR1-X1 591 + 168345084 168346102 0 2 86,120, 0,898, +,+, 118902 LINE CR1 1869 chr1 168413136 168413278 CR1-F2 618 - 168413136 168413278 0 2 60,82, 0,60, -,-, 118950 LINE CR1 1869 chr1 168418903 168419925 CR1-L3B_Croc 263 + 168418903 168419925 0 2 226,592, 0,430, +,+, 118953 LINE CR1 1869 chr1 168423267 168424113 CR1-Y2_Aves 390 + 168423267 168424113 0 2 483,349, 0,497, +,+, 118955 LINE CR1 1870 chr1 168437954 168438901 CR1-11_Crp 228 - 168437954 168438901 0 2 325,295, 0,652, -,-, 118963 LINE CR1 1870 chr1 168446885 168447830 CR1-11_Crp 238 - 168446885 168447830 0 2 329,240, 0,705, -,-, 118969 LINE CR1 1870 chr1 168454282 168455657 GGLTR5B 432 - 168454282 168455657 0 2 199,217, 0,1158, -,-, 118974 LTR ERVL 1870 chr1 168495873 168496316 CR1-X2 518 + 168495873 168496316 0 2 205,236, 0,207, +,+, 119010 LINE CR1 1871 chr1 168574618 168575354 CR1-C4 600 - 168574618 168575354 0 2 67,564, 0,172, -,-, 119073 LINE CR1 1871 chr1 168601472 168602681 CR1-C2 820 - 168601472 168602681 0 2 66,725, 0,484, -,-, 119087 LINE CR1 1871 chr1 168612864 168613245 CR1-L3A_Croc 342 + 168612864 168613245 0 2 111,121, 0,260, +,+, 119095 LINE CR1 1871 chr1 168613542 168613850 CR1-Y2_Aves 459 + 168613542 168613850 0 2 115,192, 0,116, +,+, 119097 LINE CR1 1871 chr1 168631610 168632273 CR1-F2 377 - 168631610 168632273 0 2 185,478, 0,185, -,-, 119110 LINE CR1 1871 chr1 168668416 168669126 CR1-X2 629 - 168668416 168669126 0 3 41,47,320, 0,193,390, -,-,-, 119133 LINE CR1 1871 chr1 168668461 168668622 CR1-Y4 521 + 168668461 168668622 0 2 48,112, 0,49, +,+, 119134 LINE CR1 1872 chr1 168705048 168706050 CR1-F2 550 - 168705048 168706050 0 2 507,489, 0,513, -,-, 119152 LINE CR1 1873 chr1 168838526 168839329 CR1-H 780 - 168838526 168839329 0 2 333,470, 0,333, -,-, 119245 LINE CR1 1873 chr1 168892854 168895020 CR1-X2 247 - 168892854 168895020 0 3 858,1014,286, 0,866,1880, -,-,-, 119274 LINE CR1 1874 chr1 168982587 168982978 (ATAGG)n 710 + 168982587 168982978 0 2 144,67, 0,324, +,+, 119341 Simple_repeat Simple_repeat 1874 chr1 169009577 169009906 Charlie7a_Aves 450 - 169009577 169009906 0 2 101,140, 0,189, -,-, 119360 DNA hAT-Charlie 1874 chr1 169049551 169050067 CR1-Y1_Aves 405 - 169049551 169050067 0 2 291,225, 0,291, -,-, 119387 LINE CR1 1874 chr1 169053868 169054482 CR1-11_Crp 216 + 169053868 169054482 0 2 264,110, 0,504, +,+, 119388 LINE CR1 1875 chr1 169107987 169109501 CR1-X2 385 - 169107987 169109501 0 3 693,219,307, 0,698,1207, -,-,-, 119433 LINE CR1 1875 chr1 169129747 169131256 CR1-F2 443 + 169129747 169131256 0 2 129,364, 0,1145, +,+, 119455 LINE CR1 1875 chr1 169141412 169142226 Mariner1_GG 680 - 169141412 169142226 0 2 577,237, 0,577, -,-, 119460 DNA TcMar-Mariner 1876 chr1 169244351 169244845 CR1-X1 710 - 169244351 169244845 0 2 281,80, 0,414, -,-, 119529 LINE CR1 1876 chr1 169331635 169331727 G-rich 575 + 169331635 169331727 0 2 29,37, 0,55, +,+, 119574 Low_complexity Low_complexity 1877 chr1 169420107 169420235 G-rich 602 + 169420107 169420235 0 2 31,48, 0,80, +,+, 119636 Low_complexity Low_complexity 1877 chr1 169421935 169422063 (T)n 791 + 169421935 169422063 0 2 32,46, 0,82, +,+, 119643 Simple_repeat Simple_repeat 1878 chr1 169504539 169506978 CR1-D2 458 - 169504539 169506978 0 2 12,131, 0,2308, -,-, 119718 LINE CR1 1878 chr1 169587486 169589822 CR1-L3B_Croc 281 - 169587486 169589822 0 4 522,57,146,856, 0,1131,1212,1480, -,-,-,-, 119766 LINE CR1 1879 chr1 169611373 169611433 (CTTTTT)n 526 + 169611373 169611433 0 2 15,9, 0,51, +,+, 119780 Simple_repeat Simple_repeat 1879 chr1 169620473 169623262 CR1-L3A_Croc 233 + 169620473 169623262 0 3 252,858,261, 0,865,2528, +,+,+, 119788 LINE CR1 1879 chr1 169629713 169630354 CR1-L3A_Croc 100 - 169629713 169630354 0 2 60,554, 0,87, -,-, 119795 LINE CR1 1879 chr1 169655613 169656123 CR1-Y1_Aves 452 + 169655613 169656123 0 2 285,225, 0,285, +,+, 119813 LINE CR1 1879 chr1 169710082 169710893 CR1-Y2_Aves 269 - 169710082 169710893 0 2 231,188, 0,623, -,-, 119857 LINE CR1 1879 chr1 169711245 169712166 CR1-F2 644 + 169711245 169712166 0 2 79,842, 0,79, +,+, 119859 LINE CR1 1880 chr1 169786503 169787627 GGLTR5B 391 + 169786503 169787627 0 2 404,150, 0,974, +,+, 119924 LTR ERVL 1880 chr1 169799827 169800871 CR1-L3B_Croc 200 - 169799827 169800871 0 2 303,160, 0,884, -,-, 119936 LINE CR1 1880 chr1 169802424 169803427 CR1-D2 646 - 169802424 169803427 0 2 771,229, 0,774, -,-, 119940 LINE CR1 1880 chr1 169851646 169851735 GA-rich 212 + 169851646 169851735 0 2 24,37, 0,52, +,+, 119980 Low_complexity Low_complexity 1881 chr1 169901008 169901935 CR1-Y2_Aves 339 - 169901008 169901935 0 2 82,198, 0,729, -,-, 120004 LINE CR1 1881 chr1 169918790 169919689 CR1-E 787 + 169918790 169919689 0 2 400,499, 0,400, +,+, 120015 LINE CR1 1882 chr1 170003677 170005416 CR1-F2 653 - 170003677 170005416 0 2 587,712, 0,1027, -,-, 120066 LINE CR1 1882 chr1 170028066 170028413 CR1-C4 616 + 170028066 170028413 0 2 231,116, 0,231, +,+, 120081 LINE CR1 1882 chr1 170060324 170061068 CR1-Y2_Aves 114 - 170060324 170061068 0 2 281,267, 0,477, -,-, 120100 LINE CR1 1882 chr1 170091347 170091610 Char12Mar1_GG 693 - 170091347 170091610 0 2 150,113, 0,150, -,-, 120119 DNA hAT-Charlie 1884 chr1 170262892 170263935 Mariner1_GG 629 - 170262892 170263935 0 2 892,150, 0,893, -,-, 120217 DNA TcMar-Mariner 1884 chr1 170391499 170392687 CR1-F2 546 - 170391499 170392687 0 2 496,440, 0,748, -,-, 120291 LINE CR1 1885 chr1 170440008 170443149 CR1-L3A_Croc 196 - 170440008 170443149 0 5 118,333,232,216,179, 0,1176,1723,2073,2962, -,-,-,-,-, 120322 LINE CR1 1885 chr1 170461432 170462433 CR1-L3B_Croc 188 - 170461432 170462433 0 2 633,197, 0,804, -,-, 120338 LINE CR1 1885 chr1 170487821 170488935 CR1-L3A_Croc 197 - 170487821 170488935 0 2 199,157, 0,957, -,-, 120354 LINE CR1 1886 chr1 170569163 170569479 CR1-C4 606 - 170569163 170569479 0 2 138,177, 0,139, -,-, 120399 LINE CR1 1886 chr1 170601255 170601609 AmnSINE1 308 + 170601255 170601609 0 2 86,268, 0,86, +,+, 120421 SINE 5S-Deu-L2 1887 chr1 170727062 170727142 (TAATA)n 398 + 170727062 170727142 0 2 28,7, 0,73, +,+, 120508 Simple_repeat Simple_repeat 1887 chr1 170784059 170785766 CR1-C4 411 + 170784059 170785766 0 2 88,1609, 0,98, +,+, 120538 LINE CR1 1889 chr1 170966499 170966734 CR1-L3A_Croc 40 - 170966499 170966734 0 2 125,75, 0,160, -,-, 120654 LINE CR1 1890 chr1 171093114 171093182 (TAATAAT)n 436 + 171093114 171093182 0 2 10,22, 0,46, +,+, 120736 Simple_repeat Simple_repeat 1890 chr1 171126495 171127653 CR1-E 520 - 171126495 171127653 0 2 348,805, 0,353, -,-, 120749 LINE CR1 1890 chr1 171141073 171141571 CR1-D2 608 - 171141073 171141571 0 2 297,86, 0,412, -,-, 120758 LINE CR1 1890 chr1 171148738 171149400 CR1-D2 674 + 171148738 171149400 0 2 273,42, 0,620, +,+, 120763 LINE CR1 1891 chr1 171182590 171183600 GGERVL18-int 645 + 171182590 171183600 0 3 278,632,39, 0,339,971, +,+,+, 120789 LTR ERVL 1891 chr1 171184852 171189694 CR1-F 397 + 171184852 171189694 0 2 280,122, 0,4720, +,+, 120796 LINE CR1 1891 chr1 171185162 171189540 CR1-H2 744 + 171185162 171189540 0 3 2622,411,1031, 0,2622,3347, +,+,+, 120797 LINE CR1 1891 chr1 171190022 171203817 GGERV10_LTR 595 + 171190022 171203817 0 9 70,93,49,421,999,622,461,72,74, 0,190,634,687,1301,11697,13095,13556,13721, +,+,+,+,+,+,+,+,+, 120800 LTR ERVL 1891 chr1 171196840 171201722 CR1-G 796 + 171196840 171201722 0 3 2163,1562,493, 0,2485,4389, +,+,+, 120805 LINE CR1 1891 chr1 171200903 171201229 GGERV10_LTR 813 + 171200903 171201229 0 2 61,159, 0,167, +,+, 120807 LTR ERVL 1891 chr1 171202341 171203117 GGLTR7B 727 + 171202341 171203117 0 2 101,225, 0,551, +,+, 120808 LTR ERV1 1891 chr1 171203949 171205927 CR1-F2 813 + 171203949 171205927 0 2 1565,413, 0,1565, +,+, 120811 LINE CR1 1891 chr1 171207525 171207989 GGLTR5A 359 + 171207525 171207989 0 2 223,237, 0,227, +,+, 120815 LTR ERVL 1891 chr1 171220132 171221374 CR1-F2 416 - 171220132 171221374 0 2 211,179, 0,1063, -,-, 120827 LINE CR1 1891 chr1 171277983 171278331 CR1-X2 717 - 171277983 171278331 0 2 68,272, 0,76, -,-, 120861 LINE CR1 1891 chr1 171292229 171292799 GGLTR8B 505 + 171292229 171292799 0 2 177,393, 0,177, +,+, 120873 LTR ERVL 1893 chr1 171458884 171459014 A-rich 503 + 171458884 171459014 0 2 32,47, 0,83, +,+, 120967 Low_complexity Low_complexity 1893 chr1 171507714 171508343 Char12Mar1_GG 673 - 171507714 171508343 0 2 297,258, 0,371, -,-, 120997 DNA hAT-Charlie 1893 chr1 171547844 171550552 CR1-Y1_Aves 431 - 171547844 171550552 0 2 24,136, 0,2572, -,-, 121040 LINE CR1 1894 chr1 171593209 171593884 CR1-D2 596 + 171593209 171593884 0 2 350,292, 0,383, +,+, 121072 LINE CR1 1894 chr1 171603940 171604371 CR1-D2 606 + 171603940 171604371 0 2 194,203, 0,228, +,+, 121085 LINE CR1 1894 chr1 171674618 171676273 CR1-Y4 517 - 171674618 171676273 0 2 504,239, 0,1416, -,-, 121148 LINE CR1 1895 chr1 171707708 171708263 CR1-C4 588 - 171707708 171708263 0 3 285,192,78, 0,285,477, -,-,-, 121175 LINE CR1 1895 chr1 171711734 171712275 CR1-F2 438 + 171711734 171712275 0 2 119,90, 0,451, +,+, 121178 LINE CR1 1895 chr1 171726249 171726647 CR1-L3B_Croc 52 - 171726249 171726647 0 2 146,224, 0,174, -,-, 121185 LINE CR1 1895 chr1 171780977 171781042 (TTTTTTC)n 314 + 171780977 171781042 0 2 37,7, 0,58, +,+, 121245 Simple_repeat Simple_repeat 1895 chr1 171811121 171811415 GGLTR8B 609 - 171811121 171811415 0 2 84,210, 0,84, -,-, 121273 LTR ERVL 1897 chr1 171971727 171972033 GGCAN 789 - 171971727 171972033 0 2 83,198, 0,108, -,-, 121395 Unknown Unknown 1897 chr1 171973413 171973568 GA-rich 456 + 171973413 171973568 0 2 104,27, 0,128, +,+, 121402 Low_complexity Low_complexity 1897 chr1 172041644 172041846 CR1-C4 689 + 172041644 172041846 0 2 148,52, 0,150, +,+, 121454 LINE CR1 1897 chr1 172048574 172049769 CR1-C2 361 - 172048574 172049769 0 2 677,505, 0,690, -,-, 121461 LINE CR1 1897 chr1 172060720 172061947 CR1-D2 732 - 172060720 172061947 0 2 156,482, 0,745, -,-, 121471 LINE CR1 1897 chr1 172065427 172066929 CR1-E 643 - 172065427 172066929 0 2 376,308, 0,1194, -,-, 121477 LINE CR1 1897 chr1 172068939 172069716 GGLTR8B 246 - 172068939 172069716 0 2 448,329, 0,448, -,-, 121479 LTR ERVL 1898 chr1 172161952 172162002 (TTTA)n 394 + 172161952 172162002 0 2 6,13, 0,37, +,+, 121541 Simple_repeat Simple_repeat 1899 chr1 172342719 172344160 CR1-C3 626 + 172342719 172344160 0 2 743,698, 0,743, +,+, 121671 LINE CR1 1899 chr1 172355443 172356648 CR1-L3A_Croc 229 + 172355443 172356648 0 3 218,578,348, 0,252,857, +,+,+, 121676 LINE CR1 1900 chr1 172425334 172426916 CR1-L3B_Croc 103 + 172425334 172426916 0 2 1018,343, 0,1239, +,+, 121720 LINE CR1 1900 chr1 172435108 172435286 CR1-E 794 - 172435108 172435286 0 2 108,64, 0,114, -,-, 121727 LINE CR1 1900 chr1 172446870 172447455 CR1-16_AMi 348 + 172446870 172447455 0 2 48,293, 0,292, +,+, 121735 LINE CR1 1900 chr1 172474356 172475672 CR1-D2 674 - 172474356 172475672 0 2 267,340, 0,976, -,-, 121757 LINE CR1 1901 chr1 172520069 172520544 CR1-L3B_Croc 309 + 172520069 172520544 0 2 175,213, 0,262, +,+, 121773 LINE CR1 1901 chr1 172599351 172599821 CR1-Y2_Aves 472 + 172599351 172599821 0 3 116,105,249, 0,116,221, +,+,+, 121826 LINE CR1 1902 chr1 172646385 172646440 (TTTTGAA)n 378 + 172646385 172646440 0 2 14,16, 0,39, +,+, 121847 Simple_repeat Simple_repeat 1902 chr1 172662929 172663911 CR1-C4 554 + 172662929 172663911 0 2 686,281, 0,701, +,+, 121860 LINE CR1 1902 chr1 172691170 172693617 CR1-L3A_Croc 278 + 172691170 172693617 0 2 85,170, 0,2277, +,+, 121878 LINE CR1 1902 chr1 172747995 172749185 CR1-D2 550 - 172747995 172749185 0 2 1126,51, 0,1139, -,-, 121918 LINE CR1 1903 chr1 172757554 172757751 CR1-X2 490 - 172757554 172757751 0 2 108,86, 0,111, -,-, 121924 LINE CR1 1903 chr1 172795399 172796538 CR1-F2 626 - 172795399 172796538 0 2 657,482, 0,657, -,-, 121935 LINE CR1 1903 chr1 172822098 172823191 CR1-C2 873 - 172822098 172823191 0 2 750,281, 0,812, -,-, 121947 LINE CR1 1905 chr1 173080697 173080755 A-rich 402 + 173080697 173080755 0 2 24,12, 0,46, +,+, 122093 Low_complexity Low_complexity 1906 chr1 173244665 173244780 (ATTTAT)n 406 + 173244665 173244780 0 2 9,7, 0,108, +,+, 122209 Simple_repeat Simple_repeat 1906 chr1 173245811 173247634 CR1-Y2_Aves 140 - 173245811 173247634 0 2 426,158, 0,1665, -,-, 122213 LINE CR1 238 chr1 173407643 173408374 CR1-C4 606 + 173407643 173408374 0 2 83,648, 0,83, +,+, 122331 LINE CR1 1908 chr1 173431435 173432175 CR1-Y1_Aves 454 - 173431435 173432175 0 3 54,67,582, 0,91,158, -,-,-, 122357 LINE CR1 1908 chr1 173452474 173452766 CR1-D2 652 - 173452474 173452766 0 2 236,56, 0,236, -,-, 122373 LINE CR1 1908 chr1 173470002 173470434 CR1-Y2_Aves 239 + 173470002 173470434 0 3 96,109,154, 0,144,278, +,+,+, 122384 LINE CR1 1908 chr1 173488773 173490996 CR1-Y3 103 - 173488773 173490996 0 3 378,733,158, 0,1098,2065, -,-,-, 122402 LINE CR1 1908 chr1 173491440 173492949 CR1-X2 557 + 173491440 173492949 0 2 350,694, 0,815, +,+, 122405 LINE CR1 1908 chr1 173507625 173508792 CR1-X2 477 + 173507625 173508792 0 2 65,657, 0,510, +,+, 122421 LINE CR1 1909 chr1 173575015 173575612 Char12Mar1_GG 725 - 173575015 173575612 0 2 497,44, 0,553, -,-, 122467 DNA hAT-Charlie 1909 chr1 173582840 173584644 CR1-Y4 584 - 173582840 173584644 0 2 321,894, 0,910, -,-, 122470 LINE CR1 1909 chr1 173590687 173591794 GGLTR5B 463 - 173590687 173591794 0 4 141,96,127,147, 0,386,609,960, -,-,-,-, 122477 LTR ERVL 1909 chr1 173628121 173629416 CR1-Y2_Aves 391 + 173628121 173629416 0 3 258,402,627, 0,266,668, +,+,+, 122504 LINE CR1 1909 chr1 173634224 173636809 CR1-Y 421 - 173634224 173636809 0 2 2245,340, 0,2245, -,-, 122507 LINE CR1 1909 chr1 173650312 173652279 Charlie12_GG 384 - 173650312 173652279 0 2 1822,121, 0,1846, -,-, 122516 DNA hAT-Charlie 1910 chr1 173761702 173766549 CR1-C4 492 + 173761702 173766549 0 2 259,608, 0,4239, +,+, 122579 LINE CR1 1911 chr1 173828069 173829095 CR1-X1 701 + 173828069 173829095 0 2 61,55, 0,971, +,+, 122622 LINE CR1 1911 chr1 173847674 173852243 CR1-B 881 + 173847674 173852243 0 2 1339,3203, 0,1366, +,+, 122633 LINE CR1 1911 chr1 173928748 173929819 CR1-Y2_Aves 145 + 173928748 173929819 0 2 682,306, 0,765, +,+, 122690 LINE CR1 1912 chr1 173945822 173947198 CR1-Y4 539 - 173945822 173947198 0 2 942,433, 0,943, -,-, 122700 LINE CR1 1912 chr1 174005538 174006497 CR1-F2 477 - 174005538 174006497 0 2 242,717, 0,242, -,-, 122732 LINE CR1 1913 chr1 174150247 174151491 Charlie12_GG 411 - 174150247 174151491 0 2 635,303, 0,941, -,-, 122806 DNA hAT-Charlie 1914 chr1 174240092 174241565 CR1-E 688 + 174240092 174241565 0 2 1131,342, 0,1131, +,+, 122848 LINE CR1 1914 chr1 174248873 174249961 CR1-L3A_Croc 80 + 174248873 174249961 0 2 657,260, 0,828, +,+, 122857 LINE CR1 1914 chr1 174263494 174263859 CR1-E 699 - 174263494 174263859 0 2 78,287, 0,78, -,-, 122870 LINE CR1 1915 chr1 174448162 174448500 TguLTR5e 393 - 174448162 174448500 0 2 159,137, 0,201, -,-, 122983 LTR ERVL 1916 chr1 174472726 174473688 GGLTR8A 356 + 174472726 174473688 0 2 403,259, 0,703, +,+, 122988 LTR ERVL 1916 chr1 174491527 174491596 A-rich 456 + 174491527 174491596 0 2 16,19, 0,50, +,+, 123001 Low_complexity Low_complexity 1916 chr1 174508241 174518686 REP131 155 - 174508241 174518686 0 2 183,186, 0,10259, -,-, 123017 DNA? DNA? 1916 chr1 174509052 174509718 CR1-Y1_Aves 78 - 174509052 174509718 0 2 479,133, 0,533, -,-, 123020 LINE CR1 1916 chr1 174517865 174517923 (TGTA)n 346 + 174517865 174517923 0 2 29,9, 0,49, +,+, 123027 Simple_repeat Simple_repeat 1916 chr1 174544535 174545005 CR1-F2 497 + 174544535 174545005 0 2 148,322, 0,148, +,+, 123050 LINE CR1 1916 chr1 174565760 174566471 CR1-Y1_Aves 431 - 174565760 174566471 0 2 170,541, 0,170, -,-, 123066 LINE CR1 1918 chr1 174749888 174750685 CR1-L3A_Croc 255 + 174749888 174750685 0 2 124,616, 0,181, +,+, 123143 LINE CR1 1918 chr1 174760045 174761373 CR1-Y2_Aves 146 - 174760045 174761373 0 2 363,434, 0,894, -,-, 123151 LINE CR1 1918 chr1 174782660 174783423 CR1-Y2_Aves 481 - 174782660 174783423 0 2 62,492, 0,271, -,-, 123166 LINE CR1 1919 chr1 174858150 174859316 CR1-C4 687 + 174858150 174859316 0 2 512,654, 0,512, +,+, 123212 LINE CR1 1919 chr1 174862238 174862953 CR1-Y2_Aves 326 + 174862238 174862953 0 2 577,138, 0,577, +,+, 123214 LINE CR1 1919 chr1 174899392 174900386 CR1-F2 554 - 174899392 174900386 0 2 845,146, 0,848, -,-, 123235 LINE CR1 1919 chr1 174923184 174924197 CR1-D2 611 + 174923184 174924197 0 3 170,584,255, 0,170,758, +,+,+, 123255 LINE CR1 1920 chr1 175005471 175005682 TguLTR5e 484 + 175005471 175005682 0 2 56,123, 0,88, +,+, 123306 LTR ERVL 1920 chr1 175094831 175095174 GGLTR8B 668 + 175094831 175095174 0 2 45,296, 0,47, +,+, 123349 LTR ERVL 1921 chr1 175186173 175187102 CR1-Y2_Aves 198 + 175186173 175187102 0 2 54,875, 0,54, +,+, 123401 LINE CR1 1921 chr1 175240860 175240940 (TCCC)n 278 + 175240860 175240940 0 2 15,6, 0,74, +,+, 123424 Simple_repeat Simple_repeat 1923 chr1 175379412 175380672 CR1-11_Crp 239 + 175379412 175380672 0 2 351,97, 0,1163, +,+, 123508 LINE CR1 1923 chr1 175406305 175407598 CR1-F2 531 + 175406305 175407598 0 2 359,709, 0,584, +,+, 123526 LINE CR1 1923 chr1 175435105 175438455 CR1-C3 668 + 175435105 175438455 0 3 1106,1809,435, 0,1106,2915, +,+,+, 123551 LINE CR1 1924 chr1 175532593 175533170 CR1-C4 677 - 175532593 175533170 0 2 159,246, 0,331, -,-, 123608 LINE CR1 1924 chr1 175584586 175585181 CR1-Y3 443 + 175584586 175585181 0 2 548,47, 0,548, +,+, 123644 LINE CR1 1924 chr1 175607444 175608077 CR1-X1 563 - 175607444 175608077 0 2 388,245, 0,388, -,-, 123664 LINE CR1 1924 chr1 175633291 175633497 CR1-F2 462 + 175633291 175633497 0 2 140,66, 0,140, +,+, 123681 LINE CR1 1925 chr1 175649688 175650502 CR1-H2 238 - 175649688 175650502 0 2 360,365, 0,449, -,-, 123692 LINE CR1 1925 chr1 175652433 175653348 CR1-F2 681 - 175652433 175653348 0 2 507,408, 0,507, -,-, 123696 LINE CR1 1925 chr1 175679581 175684112 CR1-F2 421 + 175679581 175684112 0 2 132,179, 0,4352, +,+, 123709 LINE CR1 1925 chr1 175742642 175743719 CR1-L3B_Croc 240 + 175742642 175743719 0 4 154,22,18,112, 0,496,690,965, +,+,+,+, 123740 LINE CR1 1925 chr1 175757859 175758626 GGLTR8A 457 - 175757859 175758626 0 2 131,444, 0,323, -,-, 123753 LTR ERVL 1926 chr1 175771232 175771990 CR1-Y4 602 + 175771232 175771990 0 2 596,162, 0,596, +,+, 123760 LINE CR1 1926 chr1 175804975 175805521 CR1-C4 575 + 175804975 175805521 0 2 78,468, 0,78, +,+, 123789 LINE CR1 1926 chr1 175808424 175811739 CR1-H2 744 + 175808424 175811739 0 2 223,141, 0,3174, +,+, 123792 LINE CR1 1926 chr1 175812345 175812848 CR1-11_Crp 111 - 175812345 175812848 0 2 282,180, 0,323, -,-, 123795 LINE CR1 1926 chr1 175888472 175888516 (TCTTTT)n 604 + 175888472 175888516 0 2 9,6, 0,38, +,+, 123843 Simple_repeat Simple_repeat 1927 chr1 175941485 175942531 CR1-C3 623 - 175941485 175942531 0 2 346,639, 0,407, -,-, 123865 LINE CR1 1928 chr1 176068815 176068892 (CT)n 708 + 176068815 176068892 0 2 37,18, 0,59, +,+, 123927 Simple_repeat Simple_repeat 1928 chr1 176123868 176125162 CR1-C4 663 - 176123868 176125162 0 3 680,28,586, 0,680,708, -,-,-, 123988 LINE CR1 1928 chr1 176136732 176137830 CR1-F2 589 - 176136732 176137830 0 2 856,242, 0,856, -,-, 124000 LINE CR1 1928 chr1 176158969 176159508 GGLTR8B 446 - 176158969 176159508 0 2 440,99, 0,440, -,-, 124012 LTR ERVL 1929 chr1 176181622 176182684 CR1-Y1_Aves 553 - 176181622 176182684 0 2 343,97, 0,965, -,-, 124022 LINE CR1 1929 chr1 176249793 176250529 GGLTR5A 495 + 176249793 176250529 0 2 353,157, 0,579, +,+, 124065 LTR ERVL 1929 chr1 176260081 176261229 CR1-C3 669 - 176260081 176261229 0 2 1106,42, 0,1106, -,-, 124077 LINE CR1 1930 chr1 176308037 176308416 (GGAA)n 822 + 176308037 176308416 0 2 180,179, 0,200, +,+, 124113 Simple_repeat Simple_repeat 1930 chr1 176326070 176326935 CR1-Y1_Aves 133 + 176326070 176326935 0 2 218,291, 0,574, +,+, 124123 LINE CR1 1930 chr1 176347140 176353375 CR1-Y2_Aves 349 + 176347140 176353375 0 3 175,597,109, 0,1523,6126, +,+,+, 124135 LINE CR1 1930 chr1 176354320 176355012 CR1-Y2_Aves 157 - 176354320 176355012 0 2 406,235, 0,457, -,-, 124137 LINE CR1 1931 chr1 176450736 176451345 CR1-F2 607 + 176450736 176451345 0 2 350,259, 0,350, +,+, 124205 LINE CR1 1931 chr1 176482212 176482852 CR1-H 869 - 176482212 176482852 0 2 576,64, 0,576, -,-, 124225 LINE CR1 241 chr1 176553519 176554168 CR1-Y1_Aves 414 - 176553519 176554168 0 2 207,429, 0,220, -,-, 124263 LINE CR1 1932 chr1 176559100 176561599 CR1-C4 586 + 176559100 176561599 0 3 373,327,1224, 0,373,1275, +,+,+, 124267 LINE CR1 1932 chr1 176583157 176583675 CR1-Y 370 - 176583157 176583675 0 3 28,222,268, 0,28,250, -,-,-, 124280 LINE CR1 1933 chr1 176719952 176720608 GGLTR11-int 434 - 176719952 176720608 0 2 338,115, 0,541, -,-, 124355 LTR ERV1 1933 chr1 176780779 176781080 Char12Mar1_GG 549 - 176780779 176781080 0 2 146,137, 0,164, -,-, 124395 DNA hAT-Charlie 1934 chr1 176877809 176878520 CR1-Y2 748 + 176877809 176878520 0 2 134,577, 0,134, +,+, 124444 LINE CR1 1934 chr1 176893437 176894785 CR1-Y2_Aves 16 - 176893437 176894785 0 2 225,505, 0,843, -,-, 124453 LINE CR1 1934 chr1 176927652 176928373 CR1-H 861 + 176927652 176928373 0 2 195,329, 0,392, +,+, 124473 LINE CR1 1935 chr1 176961748 176962143 CR1-X2 615 - 176961748 176962143 0 2 213,121, 0,274, -,-, 124491 LINE CR1 1937 chr1 177329766 177331115 CR1-C4 595 - 177329766 177331115 0 2 227,388, 0,961, -,-, 124665 LINE CR1 1939 chr1 177519118 177519467 CR1-Y4 374 + 177519118 177519467 0 2 11,256, 0,93, +,+, 124777 LINE CR1 1939 chr1 177525845 177526753 CR1-F2 514 - 177525845 177526753 0 2 597,311, 0,597, -,-, 124784 LINE CR1 1939 chr1 177533552 177534005 CR1-C 834 - 177533552 177534005 0 2 108,345, 0,108, -,-, 124788 LINE CR1 1939 chr1 177534465 177535886 CR1-C4 594 + 177534465 177535886 0 2 1316,105, 0,1316, +,+, 124789 LINE CR1 1939 chr1 177535887 177536289 CR1-C 352 + 177535887 177536289 0 2 121,256, 0,146, +,+, 124790 LINE CR1 1939 chr1 177549179 177549226 (TGTGTT)n 484 + 177549179 177549226 0 2 8,8, 0,39, +,+, 124798 Simple_repeat Simple_repeat 1939 chr1 177576296 177576898 CR1-Y3 656 + 177576296 177576898 0 2 116,486, 0,116, +,+, 124823 LINE CR1 1940 chr1 177608557 177608639 (TC)n 610 + 177608557 177608639 0 2 41,9, 0,73, +,+, 124843 Simple_repeat Simple_repeat 1940 chr1 177674255 177674752 Chompy-6_Croc 145 - 177674255 177674752 0 2 364,94, 0,403, -,-, 124877 DNA PIF-Harbinger 1940 chr1 177683203 177683407 CR1-X1 662 + 177683203 177683407 0 2 150,54, 0,150, +,+, 124884 LINE CR1 1941 chr1 177764520 177765392 CR1-C4 573 + 177764520 177765392 0 2 399,473, 0,399, +,+, 124932 LINE CR1 1941 chr1 177767431 177768651 CR1-C3 468 + 177767431 177768651 0 2 808,368, 0,852, +,+, 124935 LINE CR1 1941 chr1 177806554 177807572 CR1-Y2_Aves 435 - 177806554 177807572 0 3 263,245,444, 0,329,574, -,-,-, 124960 LINE CR1 1941 chr1 177807571 177807961 CR1-D2 636 - 177807571 177807961 0 2 101,286, 0,104, -,-, 124961 LINE CR1 1941 chr1 177831159 177832115 CR1-Y2_Aves 500 + 177831159 177832115 0 2 181,58, 0,898, +,+, 124979 LINE CR1 1942 chr1 177877224 177877801 CR1-11_Crp 112 + 177877224 177877801 0 2 185,170, 0,407, +,+, 125010 LINE CR1 1942 chr1 177973999 177974316 CR1-C 846 - 177973999 177974316 0 2 13,248, 0,69, -,-, 125079 LINE CR1 1943 chr1 178105134 178105840 CR1-E 733 + 178105134 178105840 0 2 108,131, 0,575, +,+, 125168 LINE CR1 1943 chr1 178116166 178116743 CR1-Y1_Aves 572 + 178116166 178116743 0 2 53,496, 0,81, +,+, 125172 LINE CR1 1944 chr1 178149329 178151379 CR1-X2 218 - 178149329 178151379 0 2 355,1460, 0,590, -,-, 125197 LINE CR1 1944 chr1 178158149 178159414 CR1-L3B_Croc 450 - 178158149 178159414 0 2 47,127, 0,1138, -,-, 125204 LINE CR1 1944 chr1 178160815 178161251 CR1-C4 596 - 178160815 178161251 0 2 144,292, 0,144, -,-, 125207 LINE CR1 1944 chr1 178210494 178210681 CR1-D 917 - 178210494 178210681 0 2 30,157, 0,30, -,-, 125254 LINE CR1 1944 chr1 178214537 178215396 CR1-L3B_Croc 233 + 178214537 178215396 0 2 320,193, 0,666, +,+, 125256 LINE CR1 1945 chr1 178265365 178265851 CR1-L3B_Croc 114 - 178265365 178265851 0 2 110,296, 0,190, -,-, 125291 LINE CR1 1945 chr1 178274161 178274601 REP131 293 - 178274161 178274601 0 2 135,200, 0,240, -,-, 125301 DNA? DNA? 1945 chr1 178285757 178288025 CR1-H2 329 + 178285757 178288025 0 2 1254,622, 0,1646, +,+, 125310 LINE CR1 1945 chr1 178290830 178291743 CR1-Y2_Aves 152 + 178290830 178291743 0 2 347,260, 0,653, +,+, 125312 LINE CR1 1945 chr1 178314229 178315779 CR1-C4 664 - 178314229 178315779 0 2 422,179, 0,1371, -,-, 125330 LINE CR1 1945 chr1 178338235 178338525 CR1-8_Crp 482 + 178338235 178338525 0 2 152,46, 0,244, +,+, 125353 LINE CR1 1945 chr1 178372082 178372504 Mariner1b_GG 781 - 178372082 178372504 0 2 236,186, 0,236, -,-, 125368 DNA TcMar-Mariner 1946 chr1 178394095 178394677 CR1-11_Crp 187 - 178394095 178394677 0 2 246,251, 0,331, -,-, 125387 LINE CR1 1946 chr1 178396043 178396318 CR1-D2 621 - 178396043 178396318 0 2 245,30, 0,245, -,-, 125391 LINE CR1 1946 chr1 178503192 178504119 CR1-D 567 + 178503192 178504119 0 2 832,44, 0,883, +,+, 125470 LINE CR1 1947 chr1 178551091 178551464 GGLTR5B 590 + 178551091 178551464 0 2 322,51, 0,322, +,+, 125501 LTR ERVL 1948 chr1 178703235 178703901 CR1-F2 611 - 178703235 178703901 0 2 106,560, 0,106, -,-, 125571 LINE CR1 1949 chr1 178804706 178805980 CR1-Y2_Aves 123 - 178804706 178805980 0 3 280,217,222, 0,495,1052, -,-,-, 125616 LINE CR1 1949 chr1 178836204 178836994 CR1-Y3 717 - 178836204 178836994 0 2 115,133, 0,657, -,-, 125632 LINE CR1 1949 chr1 178874596 178875211 CR1-C2 425 + 178874596 178875211 0 2 477,138, 0,477, +,+, 125650 LINE CR1 1950 chr1 178928231 178932470 CR1-C4 750 + 178928231 178932470 0 3 36,667,137, 0,36,4102, +,+,+, 125681 LINE CR1 1950 chr1 179033510 179034543 CR1-E 448 - 179033510 179034543 0 2 816,217, 0,816, -,-, 125740 LINE CR1 1950 chr1 179037400 179038131 CR1-C4 627 - 179037400 179038131 0 2 301,413, 0,318, -,-, 125741 LINE CR1 1950 chr1 179039133 179039356 CR1-X1 563 + 179039133 179039356 0 2 148,69, 0,154, +,+, 125743 LINE CR1 1951 chr1 179048121 179048948 CR1-F2 606 + 179048121 179048948 0 2 472,355, 0,472, +,+, 125750 LINE CR1 1951 chr1 179083060 179084821 CR1-C2 780 - 179083060 179084821 0 2 778,983, 0,778, -,-, 125771 LINE CR1 1951 chr1 179098022 179098889 CR1-Y2_Aves 151 - 179098022 179098889 0 2 570,123, 0,744, -,-, 125775 LINE CR1 1951 chr1 179119057 179120064 CR1-F2 600 + 179119057 179120064 0 2 402,559, 0,448, +,+, 125787 LINE CR1 1951 chr1 179142072 179142174 G-rich 334 + 179142072 179142174 0 2 11,43, 0,59, +,+, 125805 Low_complexity Low_complexity 1951 chr1 179151295 179152294 REP131 222 - 179151295 179152294 0 2 71,631, 0,368, -,-, 125815 DNA? DNA? 1952 chr1 179177986 179180017 CR1-X2 572 + 179177986 179180017 0 3 527,895,115, 0,641,1916, +,+,+, 125837 LINE CR1 1952 chr1 179240020 179240811 CR1-Y1_Aves 72 - 179240020 179240811 0 2 325,441, 0,350, -,-, 125853 LINE CR1 1952 chr1 179303556 179304591 CR1-Y1_Aves 521 - 179303556 179304591 0 2 641,105, 0,930, -,-, 125888 LINE CR1 1953 chr1 179315849 179316331 TguLTR5e 276 - 179315849 179316331 0 2 190,273, 0,209, -,-, 125904 LTR ERVL 1953 chr1 179320872 179321431 CR1-H2 682 - 179320872 179321431 0 2 96,463, 0,96, -,-, 125905 LINE CR1 1953 chr1 179378633 179379317 CR1-H 232 + 179378633 179379317 0 2 125,291, 0,393, +,+, 125942 LINE CR1 1953 chr1 179381458 179382083 GGLTR5B 610 - 179381458 179382083 0 2 82,219, 0,406, -,-, 125946 LTR ERVL 1953 chr1 179414730 179415456 CR1-F2 541 - 179414730 179415456 0 2 617,109, 0,617, -,-, 125959 LINE CR1 1953 chr1 179421426 179422023 CR1-Y2_Aves 321 + 179421426 179422023 0 2 284,288, 0,309, +,+, 125963 LINE CR1 1953 chr1 179423442 179424768 CR1-L3A_Croc 121 - 179423442 179424768 0 2 812,464, 0,862, -,-, 125965 LINE CR1 1954 chr1 179457303 179457467 CR1-F2 449 - 179457303 179457467 0 2 78,86, 0,78, -,-, 125982 LINE CR1 1954 chr1 179484023 179484536 CR1-H2 608 - 179484023 179484536 0 2 109,404, 0,109, -,-, 125999 LINE CR1 1954 chr1 179548743 179549324 CR1-Y1_Aves 489 + 179548743 179549324 0 2 517,64, 0,517, +,+, 126036 LINE CR1 1956 chr1 179737218 179737740 CR1-H 867 + 179737218 179737740 0 2 155,367, 0,155, +,+, 126148 LINE CR1 1956 chr1 179750230 179752438 CR1-Y1_Aves 412 - 179750230 179752438 0 2 93,146, 0,2062, -,-, 126158 LINE CR1 1956 chr1 179795008 179796051 CR1-F2 552 + 179795008 179796051 0 2 155,888, 0,155, +,+, 126185 LINE CR1 1956 chr1 179802072 179802550 CR1-11_Crp 236 + 179802072 179802550 0 2 131,83, 0,395, +,+, 126190 LINE CR1 1957 chr1 179832770 179833239 UCON27 221 - 179832770 179833239 0 2 170,267, 0,202, -,-, 126213 Unknown Unknown 1957 chr1 179834646 179837004 CR1-F2 480 - 179834646 179837004 0 2 117,53, 0,2305, -,-, 126215 LINE CR1 1957 chr1 179857524 179858203 CR1-Y2_Aves 436 - 179857524 179858203 0 2 240,439, 0,240, -,-, 126234 LINE CR1 1957 chr1 179939694 179940387 CR1-16_AMi 278 + 179939694 179940387 0 2 270,181, 0,512, +,+, 126285 LINE CR1 1957 chr1 179957541 179957848 CR1-3_Croc 208 - 179957541 179957848 0 2 73,206, 0,101, -,-, 126296 LINE CR1 1958 chr1 179972629 179976694 CR1-8_Crp 320 - 179972629 179976694 0 2 173,223, 0,3842, -,-, 126304 LINE CR1 244 chr1 180092042 180093015 CR1-G 895 + 180092042 180093015 0 2 860,112, 0,861, +,+, 126382 LINE CR1 1959 chr1 180180810 180181397 CR1-X1 479 - 180180810 180181397 0 2 443,144, 0,443, -,-, 126427 LINE CR1 1960 chr1 180245869 180247086 CR1-D2 147 - 180245869 180247086 0 2 627,144, 0,1073, -,-, 126468 LINE CR1 1960 chr1 180266200 180269648 CR1-F2 421 + 180266200 180269648 0 3 358,130,974, 0,2344,2474, +,+,+, 126480 LINE CR1 1960 chr1 180277242 180277619 GGLTR5A 472 - 180277242 180277619 0 2 135,141, 0,236, -,-, 126486 LTR ERVL 1961 chr1 180361107 180361142 (ACAT)n 534 + 180361107 180361142 0 2 8,8, 0,27, +,+, 126527 Simple_repeat Simple_repeat 1961 chr1 180361396 180362479 CR1-C4 639 + 180361396 180362479 0 2 578,505, 0,578, +,+, 126530 LINE CR1 1961 chr1 180378254 180379389 CR1-Y1_Aves 349 + 180378254 180379389 0 2 734,401, 0,734, +,+, 126535 LINE CR1 1962 chr1 180502543 180506178 GGERVL-C-int 566 - 180502543 180506178 0 5 516,1387,750,246,556, 0,516,1916,2833,3079, -,-,-,-,-, 126608 LTR ERVL 1962 chr1 180521573 180522012 CR1-Y2_Aves 502 - 180521573 180522012 0 2 182,255, 0,184, -,-, 126619 LINE CR1 1963 chr1 180643764 180644697 CR1-X 610 + 180643764 180644697 0 2 788,145, 0,788, +,+, 126694 LINE CR1 1963 chr1 180732065 180732403 GGLTR8A 652 + 180732065 180732403 0 2 81,257, 0,81, +,+, 126754 LTR ERVL 1963 chr1 180743224 180743341 CR1-F0 570 - 180743224 180743341 0 2 64,38, 0,79, -,-, 126767 LINE CR1 1964 chr1 180758812 180759280 GGLTR5B 346 - 180758812 180759280 0 2 182,193, 0,275, -,-, 126783 LTR ERVL 1964 chr1 180808329 180809539 GGLTR5B 634 - 180808329 180809539 0 2 223,377, 0,833, -,-, 126824 LTR ERVL 1964 chr1 180837059 180837413 GGLTR8B 217 - 180837059 180837413 0 2 154,200, 0,154, -,-, 126844 LTR ERVL 1965 chr1 180942375 180943080 CR1-X1 668 + 180942375 180943080 0 2 514,191, 0,514, +,+, 126919 LINE CR1 1965 chr1 180975272 180977378 CR1-F2 641 - 180975272 180977378 0 3 584,464,458, 0,1079,1648, -,-,-, 126937 LINE CR1 1965 chr1 180976815 180976917 GGLTR3F1 950 + 180976815 180976917 0 2 79,23, 0,79, +,+, 126939 LTR ERVL 1965 chr1 180997481 180997808 CR1-Y1_Aves 485 - 180997481 180997808 0 2 89,237, 0,90, -,-, 126954 LINE CR1 1966 chr1 181015358 181015739 CR1-C4 587 + 181015358 181015739 0 2 174,207, 0,174, +,+, 126967 LINE CR1 1966 chr1 181025242 181026375 CR1-Y2_Aves 145 - 181025242 181026375 0 2 403,397, 0,736, -,-, 126981 LINE CR1 1966 chr1 181053988 181055645 CR1-D 632 - 181053988 181055645 0 2 1292,365, 0,1292, -,-, 127003 LINE CR1 1967 chr1 181152978 181158104 GGLTR7-int 376 + 181152978 181158104 0 6 122,209,194,1162,242,52, 0,152,1139,1717,4488,5074, +,+,+,+,+,+, 127090 LTR ERV1 1968 chr1 181312767 181316202 CR1-D2 487 + 181312767 181316202 0 2 79,66, 0,3369, +,+, 127211 LINE CR1 1968 chr1 181368438 181368712 CR1-Y3 631 - 181368438 181368712 0 2 210,64, 0,210, -,-, 127259 LINE CR1 1969 chr1 181441340 181441873 CR1-11_Crp 299 - 181441340 181441873 0 2 193,244, 0,289, -,-, 127328 LINE CR1 1969 chr1 181446012 181446771 CR1-H 846 + 181446012 181446771 0 2 69,76, 0,683, +,+, 127332 LINE CR1 1969 chr1 181459638 181460169 CR1-11_Crp 278 - 181459638 181460169 0 2 209,243, 0,288, -,-, 127345 LINE CR1 1969 chr1 181464307 181465067 CR1-H 846 + 181464307 181465067 0 2 69,76, 0,684, +,+, 127349 LINE CR1 1969 chr1 181470905 181471606 GGLTR5A 448 + 181470905 181471606 0 2 285,109, 0,592, +,+, 127354 LTR ERVL 1969 chr1 181471263 181471407 (ATATAT)n 324 + 181471263 181471407 0 2 77,37, 0,107, +,+, 127356 Simple_repeat Simple_repeat 1969 chr1 181489461 181490512 CR1-C2 738 - 181489461 181490512 0 2 712,280, 0,771, -,-, 127375 LINE CR1 1970 chr1 181545476 181545679 CR1-Y1_Aves 443 + 181545476 181545679 0 2 90,113, 0,90, +,+, 127433 LINE CR1 1970 chr1 181550532 181553139 CR1-Y 718 + 181550532 181553139 0 2 95,1016, 0,1591, +,+, 127438 LINE CR1 1970 chr1 181561647 181562112 CR1-Y3 622 - 181561647 181562112 0 3 34,129,250, 0,82,215, -,-,-, 127444 LINE CR1 1970 chr1 181563778 181566465 CR1-X2 598 + 181563778 181566465 0 2 60,64, 0,2623, +,+, 127447 LINE CR1 1970 chr1 181581667 181581778 A-rich 568 + 181581667 181581778 0 2 30,47, 0,64, +,+, 127463 Low_complexity Low_complexity 1970 chr1 181596880 181598296 GGLTR5B 395 - 181596880 181598296 0 2 99,450, 0,966, -,-, 127478 LTR ERVL 1970 chr1 181601208 181603114 CR1-F2 562 + 181601208 181603114 0 2 579,631, 0,1275, +,+, 127487 LINE CR1 1970 chr1 181618506 181620256 CR1-G 745 - 181618506 181620256 0 2 717,1033, 0,717, -,-, 127499 LINE CR1 1970 chr1 181634952 181635940 CR1-Y 767 + 181634952 181635940 0 2 116,872, 0,116, +,+, 127506 LINE CR1 1970 chr1 181645913 181646337 CR1-C4 496 + 181645913 181646337 0 2 106,122, 0,302, +,+, 127513 LINE CR1 1971 chr1 181684194 181686198 CR1-L3A_Croc 307 - 181684194 181686198 0 2 130,320, 0,1684, -,-, 127550 LINE CR1 1971 chr1 181690722 181691034 GGLTR5B 473 - 181690722 181691034 0 2 147,93, 0,219, -,-, 127557 LTR ERVL 1971 chr1 181721479 181721851 CR1-Y2_Aves 492 - 181721479 181721851 0 2 194,80, 0,292, -,-, 127578 LINE CR1 1971 chr1 181760492 181761876 CR1-E 400 + 181760492 181761876 0 2 402,900, 0,484, +,+, 127609 LINE CR1 1972 chr1 181810765 181812536 CR1-D2 593 + 181810765 181812536 0 2 500,795, 0,976, +,+, 127654 LINE CR1 1972 chr1 181829307 181830326 CR1-X2 571 - 181829307 181830326 0 2 59,115, 0,904, -,-, 127668 LINE CR1 1972 chr1 181851913 181852138 CR1-L3B_Croc 454 - 181851913 181852138 0 2 83,52, 0,173, -,-, 127688 LINE CR1 1972 chr1 181871562 181872792 CR1-E 736 + 181871562 181872792 0 2 449,282, 0,948, +,+, 127698 LINE CR1 1972 chr1 181882721 181883217 CR1-C4 635 - 181882721 181883217 0 2 214,263, 0,233, -,-, 127706 LINE CR1 1972 chr1 181909082 181909562 CR1-X2 553 - 181909082 181909562 0 2 259,98, 0,382, -,-, 127719 LINE CR1 1973 chr1 181990806 181991351 CR1-Y2_Aves 305 - 181990806 181991351 0 2 339,206, 0,339, -,-, 127772 LINE CR1 1974 chr1 182170215 182171101 CR1-Y2_Aves 372 - 182170215 182171101 0 2 39,811, 0,75, -,-, 127899 LINE CR1 1974 chr1 182183211 182183447 GGLTR5B 513 + 182183211 182183447 0 2 112,122, 0,114, +,+, 127909 LTR ERVL 1975 chr1 182203349 182204421 CR1-Y1_Aves 423 + 182203349 182204421 0 2 997,75, 0,997, +,+, 127931 LINE CR1 1975 chr1 182208208 182209160 CR1-Y1_Aves 348 - 182208208 182209160 0 2 158,111, 0,841, -,-, 127933 LINE CR1 1975 chr1 182210577 182212511 CR1-E 531 - 182210577 182212511 0 2 528,776, 0,1158, -,-, 127936 LINE CR1 1975 chr1 182240986 182243644 CR1-Y2_Aves 197 - 182240986 182243644 0 2 190,328, 0,2330, -,-, 127953 LINE CR1 1975 chr1 182270405 182272230 CR1-X 197 + 182270405 182272230 0 2 305,1185, 0,640, +,+, 127970 LINE CR1 1975 chr1 182280119 182280398 GGLTR8B 298 + 182280119 182280398 0 2 78,201, 0,78, +,+, 127974 LTR ERVL 1975 chr1 182304799 182305451 CR1-Y2_Aves 207 - 182304799 182305451 0 2 196,188, 0,464, -,-, 127987 LINE CR1 1976 chr1 182325816 182326138 CR1-X2 441 - 182325816 182326138 0 2 209,113, 0,209, -,-, 128010 LINE CR1 1976 chr1 182343963 182344285 CR1-C2 371 - 182343963 182344285 0 3 85,54,80, 0,174,242, -,-,-, 128026 LINE CR1 1976 chr1 182381666 182385832 CR1-C4 537 + 182381666 182385832 0 2 406,305, 0,3861, +,+, 128050 LINE CR1 1976 chr1 182382069 182385505 CR1-C 857 + 182382069 182385505 0 3 443,1111,1001, 0,1321,2435, +,+,+, 128051 LINE CR1 1976 chr1 182421359 182422069 Char12Mar1_GG 521 - 182421359 182422069 0 2 395,179, 0,531, -,-, 128066 DNA hAT-Charlie 1976 chr1 182431228 182431749 CR1-Y2_Aves 321 - 182431228 182431749 0 2 353,107, 0,414, -,-, 128075 LINE CR1 1976 chr1 182432560 182433047 GGLTR3F2 869 + 182432560 182433047 0 2 231,209, 0,278, +,+, 128078 LTR ERVL 1977 chr1 182553830 182553898 (TTTCTC)n 342 + 182553830 182553898 0 2 9,14, 0,54, +,+, 128146 Simple_repeat Simple_repeat 1977 chr1 182562516 182562978 CR1-C3 765 - 182562516 182562978 0 2 266,196, 0,266, -,-, 128151 LINE CR1 1977 chr1 182578551 182579067 TguLTR5d 309 - 182578551 182579067 0 2 123,79, 0,437, -,-, 128163 LTR ERVL 1978 chr1 182589909 182590910 CR1-Y4 631 - 182589909 182590910 0 2 414,466, 0,535, -,-, 128173 LINE CR1 1978 chr1 182594052 182595320 GGERVL18-int 671 + 182594052 182595320 0 3 664,334,270, 0,664,998, +,+,+, 128180 LTR ERVL 1978 chr1 182595320 182595900 CR1-B 858 - 182595320 182595900 0 2 327,235, 0,345, -,-, 128181 LINE CR1 1978 chr1 182604047 182604749 CR1-C4 664 - 182604047 182604749 0 2 502,175, 0,527, -,-, 128188 LINE CR1 1978 chr1 182634570 182635266 GGLTR8B 238 + 182634570 182635266 0 3 75,161,208, 0,129,488, +,+,+, 128207 LTR ERVL 1978 chr1 182663719 182664149 REP131 188 - 182663719 182664149 0 2 154,123, 0,307, -,-, 128225 DNA? DNA? 1979 chr1 182760441 182760543 (A)n 884 + 182760441 182760543 0 2 28,22, 0,80, +,+, 128268 Simple_repeat Simple_repeat 1979 chr1 182819844 182821226 CR1-C 839 + 182819844 182821226 0 2 220,867, 0,515, +,+, 128313 LINE CR1 1980 chr1 182856450 182858916 CR1-E 755 - 182856450 182858916 0 2 60,1438, 0,1028, -,-, 128340 LINE CR1 1980 chr1 182869321 182869928 CR1-Y2_Aves 195 - 182869321 182869928 0 2 220,153, 0,454, -,-, 128348 LINE CR1 1981 chr1 182998318 182998834 GGLTR3G2 326 + 182998318 182998834 0 2 356,160, 0,356, +,+, 128354 LTR ERVL 1981 chr1 183042256 183042812 CR1-F2 578 + 183042256 183042812 0 2 479,77, 0,479, +,+, 128396 LINE CR1 1981 chr1 183048221 183049138 CR1-Y2_Aves 435 + 183048221 183049138 0 3 121,577,180, 0,134,737, +,+,+, 128399 LINE CR1 1981 chr1 183050272 183052176 CR1-Y1_Aves 498 + 183050272 183052176 0 2 296,444, 0,1460, +,+, 128400 LINE CR1 1981 chr1 183069362 183070061 CR1-Y1_Aves 342 - 183069362 183070061 0 2 274,350, 0,349, -,-, 128419 LINE CR1 1981 chr1 183074572 183074622 (CCGC)n 408 + 183074572 183074622 0 2 10,10, 0,40, +,+, 128424 Simple_repeat Simple_repeat 1981 chr1 183084511 183086269 CR1-B2 538 + 183084511 183086269 0 2 38,283, 0,1475, +,+, 128430 LINE CR1 1981 chr1 183096808 183098781 CR1-Y2_Aves 92 - 183096808 183098781 0 2 499,1405, 0,568, -,-, 128444 LINE CR1 1982 chr1 183138540 183138948 Char12Mar1_GG 676 - 183138540 183138948 0 2 245,163, 0,245, -,-, 128470 DNA hAT-Charlie 1982 chr1 183157384 183157706 CR1-Y4 532 + 183157384 183157706 0 2 89,233, 0,89, +,+, 128478 LINE CR1 1982 chr1 183160544 183161280 CR1-Y2_Aves 180 - 183160544 183161280 0 2 314,395, 0,341, -,-, 128483 LINE CR1 1982 chr1 183230560 183231600 CR1-D2 650 - 183230560 183231600 0 2 143,173, 0,867, -,-, 128539 LINE CR1 1982 chr1 183231888 183233382 CR1-C4 567 + 183231888 183233382 0 2 229,1265, 0,229, +,+, 128541 LINE CR1 1983 chr1 183251445 183252883 Char12Mar1_GG 572 - 183251445 183252883 0 2 340,158, 0,1280, -,-, 128561 DNA hAT-Charlie 1983 chr1 183337371 183338979 CR1-Y1_Aves 449 - 183337371 183338979 0 2 269,1328, 0,280, -,-, 128613 LINE CR1 1983 chr1 183351317 183353102 CR1-D 695 + 183351317 183353102 0 2 1443,342, 0,1443, +,+, 128622 LINE CR1 1983 chr1 183358517 183358963 CR1-C4 418 + 183358517 183358963 0 2 314,132, 0,314, +,+, 128625 LINE CR1 1983 chr1 183366264 183367241 CR1-D2 609 + 183366264 183367241 0 2 450,527, 0,450, +,+, 128631 LINE CR1 1984 chr1 183392005 183393104 GGLTR5B 313 + 183392005 183393104 0 2 404,125, 0,974, +,+, 128650 LTR ERVL 1984 chr1 183467396 183468530 CR1-Y2_Aves 212 - 183467396 183468530 0 2 274,369, 0,765, -,-, 128712 LINE CR1 1984 chr1 183487900 183488365 CR1-C4 424 + 183487900 183488365 0 2 236,229, 0,236, +,+, 128737 LINE CR1 1984 chr1 183499075 183499912 GGLTR5A 545 - 183499075 183499912 0 2 74,154, 0,683, -,-, 128748 LTR ERVL 1985 chr1 183514429 183515439 CR1-Y4 515 - 183514429 183515439 0 2 483,336, 0,674, -,-, 128763 LINE CR1 1985 chr1 183559959 183562961 CR1-F 889 - 183559959 183562961 0 2 1205,1527, 0,1475, -,-, 128800 LINE CR1 1985 chr1 183569246 183570705 CR1-F 421 - 183569246 183570705 0 3 384,54,1017, 0,384,442, -,-,-, 128807 LINE CR1 1986 chr1 183645625 183647843 CR1-F2 830 + 183645625 183647843 0 2 1284,651, 0,1567, +,+, 128864 LINE CR1 1986 chr1 183667783 183668516 CR1-D 199 + 183667783 183668516 0 2 356,119, 0,614, +,+, 128879 LINE CR1 1986 chr1 183670115 183672436 CR1-E 636 - 183670115 183672436 0 2 1533,173, 0,2148, -,-, 128884 LINE CR1 1986 chr1 183697767 183701190 CR1-C4 515 + 183697767 183701190 0 3 639,650,183, 0,2590,3240, +,+,+, 128911 LINE CR1 1986 chr1 183727335 183730371 GGLTR12A 629 + 183727335 183730371 0 2 35,718, 0,2318, +,+, 128940 LTR ERVL 1986 chr1 183727387 183729652 GGLTR10D-int 899 + 183727387 183729652 0 2 1899,363, 0,1902, +,+, 128941 LTR ERVK 1986 chr1 183737299 183738036 GGLTR12C 511 + 183737299 183738036 0 2 109,251, 0,486, +,+, 128952 LTR ERVL 248 chr1 183758457 183764242 CR1-C2 751 + 183758457 183764242 0 2 349,493, 0,5292, +,+, 128987 LINE CR1 248 chr1 183758806 183763717 GGERVL18-LTR 579 + 183758806 183763717 0 2 156,159, 0,4752, +,+, 128988 LTR ERVL 248 chr1 183758962 183763558 GGERVK1-int 925 + 183758962 183763558 0 5 243,402,3168,539,242, 0,243,647,3815,4354, +,+,+,+,+, 128989 LTR ERVK 1987 chr1 183771690 183771794 (A)n 870 + 183771690 183771794 0 2 42,20, 0,84, +,+, 128993 Simple_repeat Simple_repeat 1987 chr1 183773312 183774418 CR1-D2 638 - 183773312 183774418 0 2 86,660, 0,446, -,-, 128996 LINE CR1 1987 chr1 183773583 183773626 (CTTCC)n 460 + 183773583 183773626 0 2 13,13, 0,30, +,+, 128997 Simple_repeat Simple_repeat 1987 chr1 183807745 183808390 CR1-C4 418 + 183807745 183808390 0 2 366,227, 0,418, +,+, 129045 LINE CR1 1987 chr1 183843516 183843930 GGLTR5A 493 - 183843516 183843930 0 2 161,180, 0,234, -,-, 129081 LTR ERVL 1988 chr1 183898474 183898578 (A)n 928 + 183898474 183898578 0 2 28,30, 0,74, +,+, 129131 Simple_repeat Simple_repeat 1988 chr1 183907648 183910327 CR1-X2 482 + 183907648 183910327 0 2 923,824, 0,1855, +,+, 129143 LINE CR1 1988 chr1 183924296 183925153 CR1-Y1_Aves 415 + 183924296 183925153 0 2 378,470, 0,387, +,+, 129157 LINE CR1 1988 chr1 183952603 183953067 CR1-F2 378 + 183952603 183953067 0 2 413,13, 0,451, +,+, 129194 LINE CR1 1988 chr1 183972269 183973467 CR1-L3B_Croc 393 - 183972269 183973467 0 2 97,64, 0,1134, -,-, 129210 LINE CR1 1988 chr1 183979985 183980727 CR1-D2 672 + 183979985 183980727 0 2 39,703, 0,39, +,+, 129221 LINE CR1 1989 chr1 184054486 184055300 CR1-Y2_Aves 358 - 184054486 184055300 0 2 456,148, 0,666, -,-, 129290 LINE CR1 1989 chr1 184060550 184061540 CR1-D2 658 - 184060550 184061540 0 2 602,172, 0,818, -,-, 129296 LINE CR1 1989 chr1 184073055 184073210 CR1-D2 653 - 184073055 184073210 0 2 69,58, 0,97, -,-, 129308 LINE CR1 1989 chr1 184073353 184074010 CR1-Y4 528 - 184073353 184074010 0 2 282,338, 0,319, -,-, 129310 LINE CR1 1989 chr1 184152905 184154271 Char12Mar1_GG 622 - 184152905 184154271 0 2 1096,242, 0,1124, -,-, 129407 DNA hAT-Charlie 1990 chr1 184178267 184179606 CR1-Y1_Aves 268 + 184178267 184179606 0 2 451,335, 0,1004, +,+, 129448 LINE CR1 1990 chr1 184204326 184205958 CR1-C3 657 - 184204326 184205958 0 2 880,531, 0,1101, -,-, 129474 LINE CR1 1990 chr1 184220375 184220888 CR1-C4 558 - 184220375 184220888 0 2 297,214, 0,299, -,-, 129489 LINE CR1 1990 chr1 184226629 184227785 CR1-C4 515 + 184226629 184227785 0 2 530,110, 0,1046, +,+, 129498 LINE CR1 1990 chr1 184228829 184229253 TguLTR5e 377 + 184228829 184229253 0 2 152,260, 0,164, +,+, 129500 LTR ERVL 1990 chr1 184233676 184234248 CR1-L3A_Croc 295 - 184233676 184234248 0 2 224,80, 0,492, -,-, 129505 LINE CR1 1990 chr1 184237347 184240335 CR1-F2 572 + 184237347 184240335 0 2 2127,292, 0,2696, +,+, 129513 LINE CR1 1990 chr1 184254600 184255456 CR1-Y2_Aves 378 - 184254600 184255456 0 2 71,721, 0,135, -,-, 129526 LINE CR1 1990 chr1 184256259 184259986 CR1-C4 557 - 184256259 184259986 0 3 466,651,381, 0,2564,3346, -,-,-, 129529 LINE CR1 1991 chr1 184287681 184288201 CR1-E 360 + 184287681 184288201 0 3 215,218,82, 0,215,438, +,+,+, 129569 LINE CR1 1991 chr1 184307759 184308165 GGERVL-B-int 327 - 184307759 184308165 0 2 170,236, 0,170, -,-, 129586 LTR ERVL 1991 chr1 184316185 184316561 CR1-D2 162 - 184316185 184316561 0 2 38,283, 0,93, -,-, 129593 LINE CR1 1991 chr1 184317818 184318158 CR1-E 552 + 184317818 184318158 0 2 111,203, 0,137, +,+, 129595 LINE CR1 1991 chr1 184340521 184342273 CR1-C4 503 + 184340521 184342273 0 3 215,332,306, 0,215,1446, +,+,+, 129620 LINE CR1 1991 chr1 184345540 184346055 GGLTR5A 222 - 184345540 184346055 0 2 156,329, 0,186, -,-, 129629 LTR ERVL 1991 chr1 184348604 184349492 CR1-C3 618 - 184348604 184349492 0 2 546,342, 0,546, -,-, 129632 LINE CR1 1991 chr1 184350746 184353635 CR1-F0 336 - 184350746 184353635 0 2 83,200, 0,2689, -,-, 129636 LINE CR1 1991 chr1 184371710 184372855 GGLTR8B 377 + 184371710 184372855 0 2 237,154, 0,991, +,+, 129660 LTR ERVL 1991 chr1 184371947 184372659 CR1-C 801 + 184371947 184372659 0 2 236,476, 0,236, +,+, 129661 LINE CR1 1991 chr1 184373596 184373722 (T)n 725 + 184373596 184373722 0 2 39,25, 0,101, +,+, 129663 Simple_repeat Simple_repeat 1991 chr1 184377322 184378462 CR1-D 402 + 184377322 184378462 0 3 248,61,433, 0,646,707, +,+,+, 129666 LINE CR1 1991 chr1 184388053 184390134 CR1-E 650 + 184388053 184390134 0 2 962,590, 0,1491, +,+, 129680 LINE CR1 1991 chr1 184394291 184395396 CR1-G 727 + 184394291 184395396 0 2 160,125, 0,980, +,+, 129688 LINE CR1 1991 chr1 184416232 184417302 CR1-D2 538 + 184416232 184417302 0 2 302,764, 0,306, +,+, 129713 LINE CR1 248 chr1 184417993 184422147 CR1-C 731 + 184417993 184422147 0 2 398,3163, 0,991, +,+, 129717 LINE CR1 1992 chr1 184434765 184438101 CR1-Y2_Aves 214 + 184434765 184438101 0 2 1076,408, 0,2928, +,+, 129737 LINE CR1 1992 chr1 184451995 184454416 CR1-D 534 - 184451995 184454416 0 2 395,1382, 0,1039, -,-, 129757 LINE CR1 1992 chr1 184486019 184486884 CR1-D2 240 - 184486019 184486884 0 3 200,181,115, 0,368,750, -,-,-, 129794 LINE CR1 1992 chr1 184492439 184492894 CR1-H 475 - 184492439 184492894 0 2 73,81, 0,374, -,-, 129802 LINE CR1 1992 chr1 184534577 184534691 GGLTR12C 726 + 184534577 184534691 0 2 63,51, 0,63, +,+, 129841 LTR ERVL 1993 chr1 184549721 184551165 TguLTR5e 319 - 184549721 184551165 0 2 282,292, 0,1152, -,-, 129863 LTR ERVL 1993 chr1 184562140 184563004 CR1-D 676 + 184562140 184563004 0 2 48,816, 0,48, +,+, 129877 LINE CR1 1993 chr1 184599234 184599652 GGLTR8A 708 + 184599234 184599652 0 2 359,59, 0,359, +,+, 129920 LTR ERVL 1993 chr1 184638028 184639552 CR1-C3 660 + 184638028 184639552 0 2 349,600, 0,924, +,+, 129960 LINE CR1 1993 chr1 184645528 184646037 CR1-D2 561 + 184645528 184646037 0 2 251,258, 0,251, +,+, 129965 LINE CR1 1993 chr1 184669257 184670653 UCON2 452 - 184669257 184670653 0 2 46,143, 0,1253, -,-, 129982 DNA? DNA? 1994 chr1 184755086 184755678 CR1-F2 455 + 184755086 184755678 0 2 152,114, 0,478, +,+, 130047 LINE CR1 1994 chr1 184766943 184767919 CR1-F2 519 - 184766943 184767919 0 2 483,493, 0,483, -,-, 130060 LINE CR1 1995 chr1 184853349 184853645 CR1-X2 350 + 184853349 184853645 0 2 172,124, 0,172, +,+, 130133 LINE CR1 1995 chr1 184858791 184859876 Char12Mar1_GG 587 - 184858791 184859876 0 2 367,187, 0,898, -,-, 130139 DNA hAT-Charlie 1995 chr1 184868709 184869068 GGLTR8A 530 - 184868709 184869068 0 2 270,69, 0,290, -,-, 130147 LTR ERVL 1996 chr1 185006172 185006441 (TTTCC)n 528 + 185006172 185006441 0 2 123,29, 0,240, +,+, 130261 Simple_repeat Simple_repeat 1997 chr1 185105501 185106209 CR1-F2 503 + 185105501 185106209 0 2 110,261, 0,447, +,+, 130334 LINE CR1 1998 chr1 185288443 185292861 CR1-F2 423 - 185288443 185292861 0 3 208,597,640, 0,3181,3778, -,-,-, 130450 LINE CR1 1998 chr1 185322356 185323256 CR1-Y1_Aves 451 + 185322356 185323256 0 2 731,169, 0,731, +,+, 130465 LINE CR1 1999 chr1 185357852 185358285 CR1-F2 521 - 185357852 185358285 0 2 190,232, 0,201, -,-, 130501 LINE CR1 2000 chr1 185533997 185535356 CR1-L3A_Croc 197 + 185533997 185535356 0 3 113,105,193, 0,967,1166, +,+,+, 130626 LINE CR1 2000 chr1 185561744 185562330 CR1-8_Crp 211 - 185561744 185562330 0 2 308,182, 0,404, -,-, 130641 LINE CR1 2001 chr1 185602980 185606312 CR1-F2 557 + 185602980 185606312 0 2 435,134, 0,3198, +,+, 130663 LINE CR1 2001 chr1 185638162 185638892 CR1-F2 625 - 185638162 185638892 0 2 166,564, 0,166, -,-, 130695 LINE CR1 2002 chr1 185824614 185824907 CR1-E 557 - 185824614 185824907 0 2 181,67, 0,226, -,-, 130833 LINE CR1 2003 chr1 185862342 185862594 CR1-C4 649 + 185862342 185862594 0 2 85,150, 0,102, +,+, 130864 LINE CR1 2003 chr1 185888919 185893406 CR1-D2 111 + 185888919 185893406 0 2 477,372, 0,4115, +,+, 130872 LINE CR1 2003 chr1 185920820 185921808 Char12Mar1_GG 595 - 185920820 185921808 0 2 570,413, 0,575, -,-, 130893 DNA hAT-Charlie 2004 chr1 185997374 185997757 CR1-C4 737 - 185997374 185997757 0 2 271,98, 0,285, -,-, 130929 LINE CR1 2004 chr1 186012186 186012566 CR1-H 900 - 186012186 186012566 0 2 65,314, 0,66, -,-, 130937 LINE CR1 2004 chr1 186012916 186013009 (TATTTA)n 526 + 186012916 186013009 0 2 10,9, 0,84, +,+, 130938 Simple_repeat Simple_repeat 2004 chr1 186023524 186023997 CR1-E 788 + 186023524 186023997 0 2 175,298, 0,175, +,+, 130946 LINE CR1 2004 chr1 186070763 186071283 CR1-F2 360 + 186070763 186071283 0 2 18,502, 0,18, +,+, 130989 LINE CR1 2004 chr1 186098613 186099139 GGERVL-C-int 848 - 186098613 186099139 0 2 490,36, 0,490, -,-, 131013 LTR ERVL 2004 chr1 186099139 186104909 GGLTR3F2 805 - 186099139 186104909 0 3 5275,222,234, 0,5280,5536, -,-,-, 131014 LTR ERVL 2004 chr1 186105730 186106323 CR1-X1 534 + 186105730 186106323 0 2 374,219, 0,374, +,+, 131016 LINE CR1 2004 chr1 186114377 186115528 CR1-X 432 + 186114377 186115528 0 2 235,907, 0,244, +,+, 131019 LINE CR1 2005 chr1 186124609 186128976 CR1-F2 545 + 186124609 186128976 0 3 170,225,576, 0,170,3791, +,+,+, 131028 LINE CR1 2005 chr1 186129877 186131371 CR1-Y1_Aves 379 + 186129877 186131371 0 2 521,312, 0,1182, +,+, 131032 LINE CR1 2005 chr1 186130392 186131066 CR1-X1 606 + 186130392 186131066 0 2 150,510, 0,164, +,+, 131033 LINE CR1 2005 chr1 186157077 186157712 CR1-Y4 588 - 186157077 186157712 0 2 150,485, 0,150, -,-, 131045 LINE CR1 2005 chr1 186210870 186212450 CR1-F2 434 + 186210870 186212450 0 2 121,154, 0,1426, +,+, 131074 LINE CR1 2006 chr1 186264650 186265029 CR1-C4 558 + 186264650 186265029 0 2 160,217, 0,162, +,+, 131123 LINE CR1 2006 chr1 186291540 186292679 CR1-Y2_Aves 408 - 186291540 186292679 0 2 175,429, 0,710, -,-, 131142 LINE CR1 2006 chr1 186324720 186328942 CR1-F2 649 + 186324720 186328942 0 2 1084,314, 0,3908, +,+, 131161 LINE CR1 2006 chr1 186328351 186328612 GGLTR12C 341 - 186328351 186328612 0 2 112,121, 0,140, -,-, 131163 LTR ERVL 250 chr1 186383462 186385258 GGLTR5A 447 + 186383462 186385258 0 2 332,253, 0,1543, +,+, 131207 LTR ERVL 250 chr1 186383801 186385013 CR1-D2 646 + 186383801 186385013 0 2 1008,204, 0,1008, +,+, 131208 LINE CR1 2007 chr1 186449833 186450530 CR1-X 265 + 186449833 186450530 0 2 272,88, 0,609, +,+, 131248 LINE CR1 2008 chr1 186575914 186577027 CR1-F2 585 + 186575914 186577027 0 2 59,431, 0,682, +,+, 131316 LINE CR1 2008 chr1 186630272 186630602 CR1-L3B_Croc 352 + 186630272 186630602 0 2 161,143, 0,187, +,+, 131353 LINE CR1 2009 chr1 186664912 186665286 CR1-H2 462 + 186664912 186665286 0 2 268,106, 0,268, +,+, 131381 LINE CR1 2009 chr1 186709676 186710393 CR1-Y2 688 + 186709676 186710393 0 2 428,289, 0,428, +,+, 131419 LINE CR1 2009 chr1 186765396 186765460 A-rich 488 + 186765396 186765460 0 2 15,28, 0,36, +,+, 131469 Low_complexity Low_complexity 2010 chr1 186828349 186828796 GGLTR8A 603 + 186828349 186828796 0 2 227,217, 0,230, +,+, 131513 LTR ERVL 2010 chr1 186855179 186856933 CR1-F2 480 - 186855179 186856933 0 2 506,63, 0,1691, -,-, 131535 LINE CR1 2010 chr1 186879863 186882285 CR1-F2 563 + 186879863 186882285 0 2 122,262, 0,2160, +,+, 131566 LINE CR1 2010 chr1 186880005 186882022 Charlie12_GG 536 - 186880005 186882022 0 2 1860,131, 0,1886, -,-, 131567 DNA hAT-Charlie 2010 chr1 186884000 186884342 CR1-L3A_Croc 168 - 186884000 186884342 0 2 112,166, 0,176, -,-, 131569 LINE CR1 2010 chr1 186889619 186890506 CR1-X1 391 - 186889619 186890506 0 3 113,428,342, 0,113,545, -,-,-, 131573 LINE CR1 2011 chr1 186945732 186946406 CR1-E 807 - 186945732 186946406 0 2 594,80, 0,594, -,-, 131610 LINE CR1 2011 chr1 186976969 186977943 CR1-X 551 + 186976969 186977943 0 2 241,733, 0,241, +,+, 131633 LINE CR1 2011 chr1 187035299 187038049 CR1-H 826 - 187035299 187038049 0 2 2419,331, 0,2419, -,-, 131680 LINE CR1 2012 chr1 187097744 187098469 CR1-Y2_Aves 392 + 187097744 187098469 0 3 130,372,135, 0,131,590, +,+,+, 131728 LINE CR1 2012 chr1 187128452 187139985 CR1-F 426 - 187128452 187139985 0 4 126,126,126,127, 0,3941,7882,11406, -,-,-,-, 131758 LINE CR1 2012 chr1 187151520 187151929 GGLTR8A 528 - 187151520 187151929 0 2 319,90, 0,319, -,-, 131784 LTR ERVL 2012 chr1 187155382 187156315 CR1-C2 460 - 187155382 187156315 0 2 36,897, 0,36, -,-, 131788 LINE CR1 2013 chr1 187279495 187281722 GGERVL18-int 340 - 187279495 187281722 0 2 70,70, 0,2157, -,-, 131859 LTR ERVL 2013 chr1 187298055 187298805 CR1-C4 597 - 187298055 187298805 0 3 73,174,238, 0,84,512, -,-,-, 131873 LINE CR1 2014 chr1 187304199 187304871 (TTCC)n 848 + 187304199 187304871 0 2 366,294, 0,378, +,+, 131881 Simple_repeat Simple_repeat 2014 chr1 187337248 187337463 CR1-Y1_Aves 433 + 187337248 187337463 0 2 108,107, 0,108, +,+, 131911 LINE CR1 2014 chr1 187389881 187390257 CR1-C4 547 + 187389881 187390257 0 2 128,248, 0,128, +,+, 131957 LINE CR1 2015 chr1 187435397 187436067 CR1-C4 513 + 187435397 187436067 0 2 304,366, 0,304, +,+, 131994 LINE CR1 2015 chr1 187450498 187453300 CR1-H 825 + 187450498 187453300 0 2 1694,1108, 0,1694, +,+, 132003 LINE CR1 2015 chr1 187543910 187544462 GGLTR8B 265 - 187543910 187544462 0 2 431,115, 0,437, -,-, 132083 LTR ERVL 2015 chr1 187544581 187545065 CR1-X2 262 + 187544581 187545065 0 2 149,314, 0,170, +,+, 132084 LINE CR1 2015 chr1 187547206 187548674 CR1-F 889 + 187547206 187548674 0 3 183,517,768, 0,183,700, +,+,+, 132088 LINE CR1 2016 chr1 187572348 187574686 CR1-B 244 + 187572348 187574686 0 2 749,170, 0,2168, +,+, 132106 LINE CR1 2016 chr1 187573096 187574519 CR1-F2 748 + 187573096 187574519 0 2 420,1003, 0,420, +,+, 132108 LINE CR1 2016 chr1 187605522 187605854 CR1-D2 710 - 187605522 187605854 0 2 82,238, 0,94, -,-, 132132 LINE CR1 2017 chr1 187733689 187734100 GGLTR3F2 804 + 187733689 187734100 0 2 234,147, 0,264, +,+, 132219 LTR ERVL 2017 chr1 187749287 187749551 GGLTR8B 726 - 187749287 187749551 0 2 71,39, 0,225, -,-, 132227 LTR ERVL 2017 chr1 187824729 187825819 CR1-G 827 + 187824729 187825819 0 3 379,599,110, 0,381,980, +,+,+, 132275 LINE CR1 2018 chr1 187949423 187949569 CR1-C3 710 + 187949423 187949569 0 2 51,42, 0,104, +,+, 132353 LINE CR1 2018 chr1 187955124 187955257 (TTTTC)n 543 + 187955124 187955257 0 2 45,36, 0,97, +,+, 132360 Simple_repeat Simple_repeat 2019 chr1 187963629 187964494 CR1-C3 619 + 187963629 187964494 0 2 378,485, 0,380, +,+, 132373 LINE CR1 2019 chr1 187993433 187993908 CR1-F2 578 + 187993433 187993908 0 2 295,158, 0,317, +,+, 132396 LINE CR1 2019 chr1 188043842 188044322 CR1-F2 627 + 188043842 188044322 0 2 102,378, 0,102, +,+, 132443 LINE CR1 2019 chr1 188055435 188057050 CR1-F0 900 + 188055435 188057050 0 2 1123,492, 0,1123, +,+, 132450 LINE CR1 2019 chr1 188076885 188077913 CR1-C4 659 + 188076885 188077913 0 2 35,986, 0,42, +,+, 132473 LINE CR1 2020 chr1 188099572 188100390 CR1-C4 323 + 188099572 188100390 0 2 367,449, 0,369, +,+, 132496 LINE CR1 2020 chr1 188103619 188104031 CR1-B2 54 + 188103619 188104031 0 2 164,176, 0,236, +,+, 132498 LINE CR1 2020 chr1 188195218 188195861 GGLTR8A 453 - 188195218 188195861 0 2 158,485, 0,158, -,-, 132589 LTR ERVL 2021 chr1 188260778 188260955 Char12Mar1_GG 753 - 188260778 188260955 0 2 59,117, 0,60, -,-, 132649 DNA hAT-Charlie 2022 chr1 188359286 188359989 CR1-X2 344 - 188359286 188359989 0 2 249,454, 0,249, -,-, 132723 LINE CR1 2022 chr1 188374992 188375087 (T)n 768 + 188374992 188375087 0 2 18,36, 0,59, +,+, 132740 Simple_repeat Simple_repeat 2022 chr1 188397365 188397785 CR1-C4 638 - 188397365 188397785 0 2 244,95, 0,325, -,-, 132761 LINE CR1 2022 chr1 188440380 188441057 CR1-E 728 - 188440380 188441057 0 2 533,36, 0,641, -,-, 132785 LINE CR1 2022 chr1 188462695 188463908 CR1-D2 449 + 188462695 188463908 0 3 462,116,632, 0,465,581, +,+,+, 132801 LINE CR1 2023 chr1 188492246 188492712 (GGGAA)n 952 + 188492246 188492712 0 2 173,270, 0,196, +,+, 132823 Simple_repeat Simple_repeat 2023 chr1 188507655 188508403 CR1-C4 575 + 188507655 188508403 0 2 372,362, 0,386, +,+, 132839 LINE CR1 2024 chr1 188628025 188628826 CR1-D 707 + 188628025 188628826 0 2 561,240, 0,561, +,+, 132931 LINE CR1 2025 chr1 188776648 188777876 CR1-L3A_Croc 169 + 188776648 188777876 0 2 179,215, 0,1013, +,+, 133055 LINE CR1 2025 chr1 188788996 188789774 CR1-C4 609 + 188788996 188789774 0 2 340,256, 0,522, +,+, 133065 LINE CR1 2025 chr1 188794471 188798759 CR1-F2 459 - 188794471 188798759 0 2 78,365, 0,3923, -,-, 133071 LINE CR1 2025 chr1 188794542 188794783 CR1-F 714 - 188794542 188794783 0 2 40,201, 0,40, -,-, 133072 LINE CR1 2025 chr1 188801748 188802581 Char12Mar1_GG 714 - 188801748 188802581 0 2 436,102, 0,731, -,-, 133077 DNA hAT-Charlie 2025 chr1 188815889 188816384 GGLTR8A 522 - 188815889 188816384 0 2 66,227, 0,268, -,-, 133092 LTR ERVL 2025 chr1 188830319 188830675 CR1-F0 501 + 188830319 188830675 0 2 302,54, 0,302, +,+, 133112 LINE CR1 2026 chr1 188879630 188880483 CR1-L3A_Croc 183 - 188879630 188880483 0 2 236,383, 0,470, -,-, 133152 LINE CR1 2026 chr1 188921687 188923391 CR1-X1 543 + 188921687 188923391 0 2 150,75, 0,1629, +,+, 133186 LINE CR1 2026 chr1 188944661 188945313 CR1-C4 640 + 188944661 188945313 0 2 104,548, 0,104, +,+, 133197 LINE CR1 2026 chr1 188948586 188949303 CR1-D2 606 + 188948586 188949303 0 2 149,568, 0,149, +,+, 133199 LINE CR1 2027 chr1 189011233 189011658 CR1-D2 734 + 189011233 189011658 0 2 226,199, 0,226, +,+, 133243 LINE CR1 2027 chr1 189037837 189038067 CR1-C4 674 - 189037837 189038067 0 2 121,109, 0,121, -,-, 133266 LINE CR1 2027 chr1 189080171 189081139 CR1-C4 633 - 189080171 189081139 0 2 280,155, 0,813, -,-, 133299 LINE CR1 2028 chr1 189185707 189186087 CR1-Y4 516 - 189185707 189186087 0 2 251,129, 0,251, -,-, 133367 LINE CR1 2028 chr1 189192573 189196850 CR1-Y1_Aves 474 + 189192573 189196850 0 2 99,46, 0,4231, +,+, 133372 LINE CR1 2028 chr1 189221509 189221847 CR1-D2 644 - 189221509 189221847 0 2 105,233, 0,105, -,-, 133381 LINE CR1 2028 chr1 189249007 189249347 CR1-X1 662 - 189249007 189249347 0 2 202,138, 0,202, -,-, 133405 LINE CR1 2028 chr1 189251800 189252892 Char12Mar1_GG 572 - 189251800 189252892 0 2 47,269, 0,823, -,-, 133407 DNA hAT-Charlie 2028 chr1 189257225 189258360 CR1-Y2_Aves 433 - 189257225 189258360 0 2 575,153, 0,982, -,-, 133410 LINE CR1 2029 chr1 189284404 189284497 Char12Mar1_GG 699 - 189284404 189284497 0 2 52,41, 0,52, -,-, 133431 DNA hAT-Charlie 2029 chr1 189320277 189320408 A-rich 640 + 189320277 189320408 0 2 28,47, 0,84, +,+, 133454 Low_complexity Low_complexity 2029 chr1 189333299 189333373 (TTC)n 336 + 189333299 189333373 0 2 28,17, 0,57, +,+, 133457 Simple_repeat Simple_repeat 2029 chr1 189379366 189380491 CR1-Y2_Aves 99 + 189379366 189380491 0 3 109,25,891, 0,203,234, +,+,+, 133490 LINE CR1 2030 chr1 189442842 189444430 CR1-L3B_Croc 220 + 189442842 189444430 0 2 111,391, 0,1197, +,+, 133552 LINE CR1 2030 chr1 189517170 189517221 (TTTAT)n 554 + 189517170 189517221 0 2 7,15, 0,36, +,+, 133605 Simple_repeat Simple_repeat 2030 chr1 189527429 189529212 CR1-D 737 + 189527429 189529212 0 2 861,922, 0,861, +,+, 133614 LINE CR1 2031 chr1 189562150 189562521 GGLTR8B 572 + 189562150 189562521 0 3 42,99,206, 0,65,165, +,+,+, 133637 LTR ERVL 2031 chr1 189573715 189574300 CR1-F2 627 + 189573715 189574300 0 2 317,250, 0,335, +,+, 133643 LINE CR1 2031 chr1 189577845 189579451 CR1-Y2_Aves 150 - 189577845 189579451 0 2 460,275, 0,1331, -,-, 133649 LINE CR1 2031 chr1 189588248 189589567 CR1-Y1_Aves 332 - 189588248 189589567 0 2 146,129, 0,1190, -,-, 133657 LINE CR1 2031 chr1 189601764 189603098 CR1-C4 477 - 189601764 189603098 0 2 508,218, 0,1116, -,-, 133670 LINE CR1 2031 chr1 189653402 189655004 Char12Mar1_GG 618 - 189653402 189655004 0 2 304,248, 0,1354, -,-, 133700 DNA hAT-Charlie 2032 chr1 189707689 189707849 CR1-X1 725 - 189707689 189707849 0 2 37,123, 0,37, -,-, 133752 LINE CR1 2032 chr1 189744766 189746057 CR1-Y2_Aves 308 + 189744766 189746057 0 3 309,47,726, 0,517,565, +,+,+, 133798 LINE CR1 2033 chr1 189799248 189801393 CR1-F2 366 + 189799248 189801393 0 2 109,113, 0,2032, +,+, 133841 LINE CR1 2033 chr1 189881456 189882088 CR1-Y2_Aves 479 + 189881456 189882088 0 3 242,37,80, 0,327,552, +,+,+, 133905 LINE CR1 2033 chr1 189887306 189888586 CR1-L3B_Croc 114 + 189887306 189888586 0 2 305,442, 0,838, +,+, 133914 LINE CR1 2033 chr1 189902853 189903723 CR1-L3B_Croc 274 - 189902853 189903723 0 2 275,102, 0,768, -,-, 133922 LINE CR1 2034 chr1 189948889 189952925 CR1-Y1_Aves 283 - 189948889 189952925 0 2 369,418, 0,3618, -,-, 133960 LINE CR1 2034 chr1 189993092 189993460 CR1-D2 658 - 189993092 189993460 0 2 250,115, 0,253, -,-, 134011 LINE CR1 2034 chr1 190031618 190031821 CR1-C4 695 + 190031618 190031821 0 2 131,65, 0,138, +,+, 134042 LINE CR1 254 chr1 190053938 190054749 CR1-Y3 691 - 190053938 190054749 0 2 314,469, 0,342, -,-, 134057 LINE CR1 2035 chr1 190105570 190106219 CR1-C4 609 + 190105570 190106219 0 3 101,214,324, 0,101,325, +,+,+, 134099 LINE CR1 2035 chr1 190182788 190183145 GGLTR8B 636 + 190182788 190183145 0 2 91,266, 0,91, +,+, 134149 LTR ERVL 2036 chr1 190194266 190194577 CR1-Y1_Aves 526 + 190194266 190194577 0 2 97,211, 0,100, +,+, 134157 LINE CR1 2036 chr1 190218564 190219257 L2-1_AMi 205 - 190218564 190219257 0 2 384,164, 0,529, -,-, 134173 LINE L2 2036 chr1 190223058 190223638 CR1-E 323 - 190223058 190223638 0 2 207,365, 0,215, -,-, 134177 LINE CR1 2036 chr1 190278060 190278606 CR1-D2 702 + 190278060 190278606 0 2 146,400, 0,146, +,+, 134225 LINE CR1 2036 chr1 190305739 190306280 CR1-F2 443 + 190305739 190306280 0 2 238,99, 0,442, +,+, 134249 LINE CR1 254 chr1 190316105 190316776 GGLTR8B 434 + 190316105 190316776 0 2 436,229, 0,442, +,+, 134260 LTR ERVL 2038 chr1 190514364 190515077 L2-1_AMi 181 + 190514364 190515077 0 2 305,122, 0,591, +,+, 134362 LINE L2 2038 chr1 190530612 190533755 CR1-Y2_Aves 224 + 190530612 190533755 0 3 579,561,505, 0,762,2638, +,+,+, 134371 LINE CR1 2038 chr1 190536840 190537096 CR1-F2 469 + 190536840 190537096 0 2 74,182, 0,74, +,+, 134376 LINE CR1 2038 chr1 190571812 190572383 CR1-Y4 569 + 190571812 190572383 0 2 109,436, 0,135, +,+, 134388 LINE CR1 2038 chr1 190573192 190573575 CR1-H 878 + 190573192 190573575 0 2 188,195, 0,188, +,+, 134390 LINE CR1 2039 chr1 190588486 190588904 CR1-F2 565 - 190588486 190588904 0 2 313,104, 0,314, -,-, 134402 LINE CR1 2039 chr1 190602670 190603429 CR1-H 830 - 190602670 190603429 0 2 34,725, 0,34, -,-, 134420 LINE CR1 2039 chr1 190608448 190610078 CR1-Y1_Aves 387 + 190608448 190610078 0 2 543,1080, 0,550, +,+, 134424 LINE CR1 2039 chr1 190623941 190624512 CR1-C4 612 - 190623941 190624512 0 2 84,327, 0,244, -,-, 134433 LINE CR1 2039 chr1 190627701 190632003 CR1-D 414 + 190627701 190632003 0 2 264,230, 0,4072, +,+, 134437 LINE CR1 2039 chr1 190660462 190660804 CR1-X 564 + 190660462 190660804 0 2 208,134, 0,208, +,+, 134469 LINE CR1 2039 chr1 190685107 190685674 CR1-D 477 + 190685107 190685674 0 2 112,216, 0,351, +,+, 134488 LINE CR1 2039 chr1 190685187 190685463 CR1-Y4 521 + 190685187 190685463 0 2 203,73, 0,203, +,+, 134489 LINE CR1 2039 chr1 190691470 190691959 GGLTR5B 594 + 190691470 190691959 0 2 241,228, 0,261, +,+, 134497 LTR ERVL 2039 chr1 190694293 190696026 CR1-C4 369 + 190694293 190696026 0 2 756,969, 0,764, +,+, 134501 LINE CR1 2040 chr1 190799302 190799507 CR1-C4 562 + 190799302 190799507 0 2 112,93, 0,112, +,+, 134581 LINE CR1 2040 chr1 190811929 190812422 CR1-D2 597 + 190811929 190812422 0 2 93,400, 0,93, +,+, 134591 LINE CR1 2040 chr1 190823391 190823794 GGLTR8A 455 + 190823391 190823794 0 2 57,191, 0,212, +,+, 134603 LTR ERVL 2040 chr1 190833188 190833610 CR1-Y4 586 - 190833188 190833610 0 2 325,95, 0,327, -,-, 134611 LINE CR1 2041 chr1 190850696 190850830 CR1-C4 724 + 190850696 190850830 0 2 40,87, 0,47, +,+, 134631 LINE CR1 2041 chr1 190860418 190860963 CR1-Y1_Aves 521 + 190860418 190860963 0 2 88,454, 0,91, +,+, 134640 LINE CR1 2041 chr1 190865428 190866182 CR1-Y3 710 + 190865428 190866182 0 2 543,210, 0,544, +,+, 134647 LINE CR1 2041 chr1 190893307 190893581 CR1-D2 623 - 190893307 190893581 0 2 174,99, 0,175, -,-, 134670 LINE CR1 2041 chr1 190898241 190898315 A-rich 408 + 190898241 190898315 0 2 38,13, 0,61, +,+, 134677 Low_complexity Low_complexity 2041 chr1 190906438 190906811 GGLTR5B 426 + 190906438 190906811 0 2 96,234, 0,139, +,+, 134687 LTR ERVL 2041 chr1 190910692 190911040 CR1-Y4 657 + 190910692 190911040 0 2 120,228, 0,120, +,+, 134691 LINE CR1 2041 chr1 190932167 190932629 CR1-D 450 + 190932167 190932629 0 2 256,188, 0,274, +,+, 134714 LINE CR1 2041 chr1 190952379 190953781 CR1-D 675 - 190952379 190953781 0 2 775,627, 0,775, -,-, 134727 LINE CR1 2041 chr1 190966044 190971424 CR1-Y4 437 + 190966044 190971424 0 2 104,173, 0,5207, +,+, 134739 LINE CR1 2041 chr1 190966130 190970612 CR1-Y 227 + 190966130 190970612 0 2 17,932, 0,3550, +,+, 134740 LINE CR1 2042 chr1 191022265 191023778 CR1-L3A_Croc 93 - 191022265 191023778 0 3 298,189,630, 0,443,883, -,-,-, 134802 LINE CR1 2042 chr1 191069629 191070975 CR1-G 619 - 191069629 191070975 0 2 611,639, 0,707, -,-, 134852 LINE CR1 2042 chr1 191077039 191077143 (T)n 695 + 191077039 191077143 0 2 32,24, 0,80, +,+, 134857 Simple_repeat Simple_repeat 2042 chr1 191095950 191096274 GGLTR8A 511 + 191095950 191096274 0 2 191,119, 0,205, +,+, 134876 LTR ERVL 2043 chr1 191121679 191121766 (TTAT)n 272 + 191121679 191121766 0 2 10,34, 0,53, +,+, 134909 Simple_repeat Simple_repeat 2043 chr1 191179033 191179378 GGLTR8B 587 - 191179033 191179378 0 2 168,177, 0,168, -,-, 134979 LTR ERVL 2043 chr1 191203991 191204255 CR1-L3B_Croc 92 + 191203991 191204255 0 2 108,130, 0,134, +,+, 135016 LINE CR1 2043 chr1 191218380 191218629 CR1-Y2_Aves 372 - 191218380 191218629 0 2 103,109, 0,140, -,-, 135036 LINE CR1 2043 chr1 191219152 191219285 A-rich 590 + 191219152 191219285 0 2 44,51, 0,82, +,+, 135037 Low_complexity Low_complexity 2043 chr1 191222082 191223959 CR1-Y4 496 - 191222082 191223959 0 2 200,1204, 0,673, -,-, 135040 LINE CR1 2044 chr1 191255215 191255925 CR1-D 727 + 191255215 191255925 0 3 330,337,42, 0,330,668, +,+,+, 135082 LINE CR1 2044 chr1 191298049 191298465 TguLTR5e 425 - 191298049 191298465 0 2 338,77, 0,339, -,-, 135135 LTR ERVL 2044 chr1 191316395 191317204 CR1-B2 772 - 191316395 191317204 0 2 283,526, 0,283, -,-, 135159 LINE CR1 2044 chr1 191332830 191333165 CR1-E 276 - 191332830 191333165 0 2 101,185, 0,150, -,-, 135175 LINE CR1 2044 chr1 191349795 191351720 CR1-F2 513 + 191349795 191351720 0 3 375,723,140, 0,994,1785, +,+,+, 135201 LINE CR1 2045 chr1 191383523 191384687 CR1-C 841 + 191383523 191384687 0 2 908,256, 0,908, +,+, 135244 LINE CR1 2045 chr1 191404377 191404468 CR1-D2 618 - 191404377 191404468 0 2 26,65, 0,26, -,-, 135269 LINE CR1 2045 chr1 191404858 191405383 CR1-D2 649 - 191404858 191405383 0 2 204,321, 0,204, -,-, 135270 LINE CR1 2045 chr1 191418368 191419162 CR1-Y3 712 - 191418368 191419162 0 2 692,64, 0,730, -,-, 135284 LINE CR1 2045 chr1 191443910 191445284 CR1-F2 314 + 191443910 191445284 0 3 119,353,399, 0,152,975, +,+,+, 135308 LINE CR1 2045 chr1 191453373 191453558 GGLTR5B 411 + 191453373 191453558 0 2 133,52, 0,133, +,+, 135323 LTR ERVL 2045 chr1 191453666 191454173 CR1-B2 669 + 191453666 191454173 0 2 153,354, 0,153, +,+, 135324 LINE CR1 2045 chr1 191471070 191471659 CR1-X2 536 - 191471070 191471659 0 2 299,290, 0,299, -,-, 135352 LINE CR1 2045 chr1 191477795 191478944 CR1-Y2_Aves 352 + 191477795 191478944 0 2 278,293, 0,856, +,+, 135361 LINE CR1 2045 chr1 191484994 191485408 GGLTR5B 520 - 191484994 191485408 0 2 276,105, 0,309, -,-, 135372 LTR ERVL 2046 chr1 191502339 191506616 CR1-Y2_Aves 137 - 191502339 191506616 0 3 165,307,623, 0,3306,3654, -,-,-, 135391 LINE CR1 2046 chr1 191536999 191537093 (ATTTTT)n 334 + 191536999 191537093 0 2 16,41, 0,53, +,+, 135425 Simple_repeat Simple_repeat 2046 chr1 191550079 191550582 GGLTR3F2 602 + 191550079 191550582 0 2 232,219, 0,284, +,+, 135444 LTR ERVL 2046 chr1 191590314 191592074 CR1-Y4 488 + 191590314 191592074 0 2 133,156, 0,1604, +,+, 135498 LINE CR1 2046 chr1 191607068 191607530 CR1-Y1_Aves 453 - 191607068 191607530 0 2 214,248, 0,214, -,-, 135521 LINE CR1 2046 chr1 191611709 191613348 CR1-Y2_Aves 88 - 191611709 191613348 0 2 1168,177, 0,1462, -,-, 135529 LINE CR1 2047 chr1 191648331 191648996 Char12Mar1_GG 496 - 191648331 191648996 0 2 450,95, 0,570, -,-, 135574 DNA hAT-Charlie 2047 chr1 191713245 191714335 CR1-Y3 525 + 191713245 191714335 0 2 123,630, 0,460, +,+, 135639 LINE CR1 2047 chr1 191717326 191718982 CR1-G 197 - 191717326 191718982 0 2 91,111, 0,1545, -,-, 135646 LINE CR1 2047 chr1 191723876 191724254 CR1-X1 609 - 191723876 191724254 0 2 332,41, 0,337, -,-, 135657 LINE CR1 2048 chr1 191791267 191792828 CR1-D2 622 + 191791267 191792828 0 2 248,886, 0,675, +,+, 135728 LINE CR1 2048 chr1 191859596 191860548 CR1-Y2_Aves 347 - 191859596 191860548 0 2 229,700, 0,252, -,-, 135808 LINE CR1 2048 chr1 191883648 191884108 CR1-F2 298 - 191883648 191884108 0 2 276,181, 0,279, -,-, 135831 LINE CR1 2049 chr1 191893639 191894079 CR1-Y2_Aves 250 + 191893639 191894079 0 3 88,33,110, 0,287,330, +,+,+, 135843 LINE CR1 2049 chr1 191943277 191943456 CR1-H 528 - 191943277 191943456 0 2 91,38, 0,141, -,-, 135887 LINE CR1 2049 chr1 191957719 191959581 CR1-C4 596 + 191957719 191959581 0 2 68,82, 0,1780, +,+, 135905 LINE CR1 2049 chr1 191957770 191959496 CR1-Y4 574 + 191957770 191959496 0 2 767,134, 0,1592, +,+, 135906 LINE CR1 2049 chr1 191963131 191963972 CR1-L3B_Croc 263 + 191963131 191963972 0 2 309,288, 0,553, +,+, 135915 LINE CR1 2049 chr1 191992550 191992803 (CTTT)n 300 + 191992550 191992803 0 2 9,210, 0,43, +,+, 135942 Simple_repeat Simple_repeat 2050 chr1 192142689 192143868 CR1-L3A_Croc 269 + 192142689 192143868 0 3 610,166,103, 0,729,1076, +,+,+, 136071 LINE CR1 2051 chr1 192211054 192211570 CR1-Y4 642 + 192211054 192211570 0 2 358,158, 0,358, +,+, 136126 LINE CR1 2052 chr1 192307097 192307863 CR1-13_AMi 300 + 192307097 192307863 0 2 241,143, 0,623, +,+, 136202 LINE CR1 2052 chr1 192335335 192335937 CR1-C4 637 + 192335335 192335937 0 2 59,361, 0,241, +,+, 136219 LINE CR1 2052 chr1 192400491 192401843 CR1-L3B_Croc 247 - 192400491 192401843 0 2 299,806, 0,546, -,-, 136270 LINE CR1 2053 chr1 192446880 192447418 CR1-F 898 + 192446880 192447418 0 2 344,194, 0,344, +,+, 136305 LINE CR1 2053 chr1 192463050 192463825 CR1-C4 551 + 192463050 192463825 0 2 420,355, 0,420, +,+, 136315 LINE CR1 2053 chr1 192500766 192501477 CR1-L3A_Croc 163 + 192500766 192501477 0 2 322,185, 0,526, +,+, 136341 LINE CR1 2053 chr1 192501647 192501990 CR1-F2 542 + 192501647 192501990 0 2 69,261, 0,82, +,+, 136342 LINE CR1 2054 chr1 192586248 192587043 CR1-D2 546 + 192586248 192587043 0 2 85,99, 0,696, +,+, 136407 LINE CR1 2054 chr1 192670094 192670518 GGLTR8B 514 + 192670094 192670518 0 2 366,58, 0,366, +,+, 136482 LTR ERVL 2055 chr1 192735041 192737597 CR1-C4 631 + 192735041 192737597 0 2 47,87, 0,2469, +,+, 136522 LINE CR1 2055 chr1 192753219 192753483 CR1-Y1_Aves 399 - 192753219 192753483 0 2 126,112, 0,152, -,-, 136550 LINE CR1 2055 chr1 192756991 192757481 CR1-Y2_Aves 294 - 192756991 192757481 0 2 301,189, 0,301, -,-, 136552 LINE CR1 2055 chr1 192802325 192802953 CR1-Y1_Aves 348 + 192802325 192802953 0 2 220,155, 0,473, +,+, 136595 LINE CR1 2056 chr1 192833415 192838579 CR1-C 821 - 192833415 192838579 0 2 1522,3049, 0,2115, -,-, 136624 LINE CR1 2056 chr1 192841465 192844147 CR1-C 865 - 192841465 192844147 0 2 1513,560, 0,2122, -,-, 136630 LINE CR1 2056 chr1 192854201 192859388 CR1-C 827 - 192854201 192859388 0 2 1512,3066, 0,2121, -,-, 136635 LINE CR1 2056 chr1 192863545 192865266 CR1-H 702 + 192863545 192865266 0 2 242,1479, 0,242, +,+, 136641 LINE CR1 2056 chr1 192888782 192889478 CR1-11_Crp 200 + 192888782 192889478 0 2 219,432, 0,264, +,+, 136656 LINE CR1 2056 chr1 192914088 192915231 CR1-X1 483 + 192914088 192915231 0 2 53,297, 0,846, +,+, 136674 LINE CR1 2056 chr1 192932893 192933262 CR1-D 601 + 192932893 192933262 0 2 115,253, 0,116, +,+, 136684 LINE CR1 2056 chr1 192934113 192934960 CR1-D 649 - 192934113 192934960 0 3 259,463,125, 0,259,722, -,-,-, 136685 LINE CR1 3 chr1 192936798 192938773 CR1-F0 480 - 192936798 192938773 0 2 182,83, 0,1892, -,-, 136690 LINE CR1 2057 chr1 192978065 192979225 CR1-Y2_Aves 184 + 192978065 192979225 0 2 454,565, 0,595, +,+, 136726 LINE CR1 2058 chr1 193132309 193133422 CR1-Y4 318 - 193132309 193133422 0 2 447,474, 0,639, -,-, 136817 LINE CR1 2058 chr1 193183824 193186945 CR1-F2 406 + 193183824 193186945 0 2 96,159, 0,2962, +,+, 136860 LINE CR1 257 chr1 193198296 193201316 CR1-C4 568 + 193198296 193201316 0 2 171,225, 0,2795, +,+, 136878 LINE CR1 2059 chr1 193267983 193268363 CR1-D2 527 - 193267983 193268363 0 2 195,184, 0,196, -,-, 136929 LINE CR1 2059 chr1 193272452 193272763 CR1-D2 667 + 193272452 193272763 0 2 60,55, 0,256, +,+, 136934 LINE CR1 2060 chr1 193343272 193346462 CR1-D2 706 + 193343272 193346462 0 2 158,67, 0,3123, +,+, 137003 LINE CR1 2060 chr1 193344901 193345535 CR1-Y2_Aves 471 - 193344901 193345535 0 2 342,108, 0,526, -,-, 137005 LINE CR1 2060 chr1 193355012 193355493 CR1-X2 288 - 193355012 193355493 0 2 230,251, 0,230, -,-, 137016 LINE CR1 2060 chr1 193394517 193395853 CR1-X1 561 - 193394517 193395853 0 2 174,1162, 0,174, -,-, 137061 LINE CR1 2060 chr1 193397600 193397945 CR1-D2 613 - 193397600 193397945 0 2 280,63, 0,282, -,-, 137062 LINE CR1 2060 chr1 193455435 193456433 CR1-C3 680 - 193455435 193456433 0 2 430,568, 0,430, -,-, 137097 LINE CR1 2061 chr1 193496867 193496989 CR1-F2 534 - 193496867 193496989 0 2 61,61, 0,61, -,-, 137134 LINE CR1 2061 chr1 193497102 193497213 CR1-F2 517 - 193497102 193497213 0 2 58,53, 0,58, -,-, 137135 LINE CR1 2061 chr1 193510685 193511105 CR1-E 409 + 193510685 193511105 0 2 196,224, 0,196, +,+, 137152 LINE CR1 2061 chr1 193521859 193528218 CR1-F2 389 - 193521859 193528218 0 2 154,88, 0,6271, -,-, 137163 LINE CR1 2061 chr1 193532161 193532395 CR1-D2 664 - 193532161 193532395 0 2 181,53, 0,181, -,-, 137170 LINE CR1 2061 chr1 193544251 193544723 CR1-X2 587 - 193544251 193544723 0 2 340,72, 0,400, -,-, 137180 LINE CR1 2061 chr1 193565332 193565737 CR1-F2 546 + 193565332 193565737 0 2 238,162, 0,243, +,+, 137198 LINE CR1 2061 chr1 193566188 193566439 CR1-X1 627 + 193566188 193566439 0 2 112,139, 0,112, +,+, 137199 LINE CR1 2061 chr1 193574257 193574984 CR1-F0 316 + 193574257 193574984 0 2 214,103, 0,624, +,+, 137205 LINE CR1 2061 chr1 193579826 193581138 CR1-F2 443 + 193579826 193581138 0 2 104,158, 0,1154, +,+, 137213 LINE CR1 2062 chr1 193606172 193613049 CR1-F2 425 - 193606172 193613049 0 3 89,496,292, 0,3518,6585, -,-,-, 137235 LINE CR1 2062 chr1 193607341 193608599 CR1-C4 623 + 193607341 193608599 0 2 796,462, 0,796, +,+, 137237 LINE CR1 2063 chr1 193727692 193727913 CR1-F2 68 + 193727692 193727913 0 2 16,103, 0,118, +,+, 137340 LINE CR1 2063 chr1 193737710 193737981 CR1-X2 652 - 193737710 193737981 0 2 93,160, 0,111, -,-, 137354 LINE CR1 2063 chr1 193797347 193797783 CR1-C4 393 + 193797347 193797783 0 2 180,256, 0,180, +,+, 137393 LINE CR1 2063 chr1 193797973 193799710 CR1-D2 590 + 193797973 193799710 0 2 364,571, 0,1166, +,+, 137394 LINE CR1 2063 chr1 193854368 193854541 (CCTTC)n 396 + 193854368 193854541 0 2 60,25, 0,148, +,+, 137445 Simple_repeat Simple_repeat 2064 chr1 193859254 193859894 CR1-D2 412 - 193859254 193859894 0 3 221,147,85, 0,246,555, -,-,-, 137450 LINE CR1 2064 chr1 193904075 193904416 (TCCA)n 616 + 193904075 193904416 0 2 117,44, 0,297, +,+, 137504 Simple_repeat Simple_repeat 2064 chr1 193911389 193911727 CR1-D2 540 - 193911389 193911727 0 2 153,184, 0,154, -,-, 137512 LINE CR1 2064 chr1 193914734 193915320 CR1-D2 600 + 193914734 193915320 0 2 136,83, 0,503, +,+, 137519 LINE CR1 2064 chr1 193932150 193932872 CR1-D 586 + 193932150 193932872 0 3 90,164,455, 0,103,267, +,+,+, 137544 LINE CR1 2065 chr1 194009727 194011134 CR1-X2 511 - 194009727 194011134 0 2 66,76, 0,1331, -,-, 137619 LINE CR1 2065 chr1 194025397 194026235 CR1-D2 631 + 194025397 194026235 0 2 89,286, 0,552, +,+, 137644 LINE CR1 2065 chr1 194040164 194040812 CR1-11_Crp 344 + 194040164 194040812 0 2 247,194, 0,454, +,+, 137663 LINE CR1 2065 chr1 194057788 194058140 CR1-D2 252 - 194057788 194058140 0 2 87,265, 0,87, -,-, 137682 LINE CR1 2065 chr1 194074144 194074427 CR1-12_AMi 316 - 194074144 194074427 0 2 91,180, 0,103, -,-, 137704 LINE CR1 2065 chr1 194096390 194098297 CR1-F2 581 + 194096390 194098297 0 2 45,229, 0,1678, +,+, 137720 LINE CR1 2066 chr1 194196530 194197232 GGLTR7B 254 + 194196530 194197232 0 2 147,175, 0,527, +,+, 137778 LTR ERV1 2066 chr1 194199007 194199320 GGERVL-B-int 384 - 194199007 194199320 0 2 141,157, 0,156, -,-, 137780 LTR ERVL 2066 chr1 194210475 194210788 GGERVL-B-int 391 + 194210475 194210788 0 2 157,141, 0,172, +,+, 137802 LTR ERVL 2066 chr1 194216785 194217078 CR1-Y4 484 - 194216785 194217078 0 2 187,96, 0,197, -,-, 137812 LINE CR1 2066 chr1 194217153 194217543 CR1-Y4 476 - 194217153 194217543 0 3 148,90,80, 0,211,310, -,-,-, 137814 LINE CR1 2066 chr1 194217210 194217386 CR1-Y2 536 - 194217210 194217386 0 2 104,72, 0,104, -,-, 137815 LINE CR1 2066 chr1 194217527 194217779 CR1-Y2 414 - 194217527 194217779 0 2 104,87, 0,165, -,-, 137816 LINE CR1 2066 chr1 194217844 194218230 CR1-Y2 562 - 194217844 194218230 0 2 79,90, 0,296, -,-, 137819 LINE CR1 2066 chr1 194217997 194218162 CR1-Y2 530 - 194217997 194218162 0 2 88,77, 0,88, -,-, 137821 LINE CR1 2066 chr1 194218228 194218550 CR1-Y2 453 - 194218228 194218550 0 3 22,155,68, 0,99,254, -,-,-, 137822 LINE CR1 2066 chr1 194218769 194218993 CR1-Y2 543 - 194218769 194218993 0 2 127,75, 0,149, -,-, 137826 LINE CR1 2066 chr1 194219063 194219381 CR1-F0 407 - 194219063 194219381 0 4 79,22,20,69, 0,137,229,249, -,-,-,-, 137829 LINE CR1 2066 chr1 194219374 194219608 CR1-H2 535 - 194219374 194219608 0 2 79,78, 0,156, -,-, 137832 LINE CR1 2066 chr1 194224011 194224212 CR1-Y2 536 + 194224011 194224212 0 2 15,89, 0,112, +,+, 137838 LINE CR1 2066 chr1 194224201 194224758 CR1-Y4 531 + 194224201 194224758 0 2 79,469, 0,88, +,+, 137840 LINE CR1 2067 chr1 194263760 194264569 CR1-C4 473 - 194263760 194264569 0 2 96,713, 0,96, -,-, 137873 LINE CR1 2067 chr1 194273542 194274153 CR1-Y2_Aves 305 + 194273542 194274153 0 2 166,424, 0,187, +,+, 137878 LINE CR1 2067 chr1 194281484 194282021 CR1-Y1_Aves 522 - 194281484 194282021 0 2 100,152, 0,385, -,-, 137881 LINE CR1 2067 chr1 194293930 194294994 CR1-H 836 - 194293930 194294994 0 2 613,451, 0,613, -,-, 137894 LINE CR1 2067 chr1 194298779 194299812 CR1-C4 692 - 194298779 194299812 0 3 187,426,374, 0,188,659, -,-,-, 137897 LINE CR1 2067 chr1 194300315 194300781 CR1-F2 556 + 194300315 194300781 0 2 258,208, 0,258, +,+, 137899 LINE CR1 2067 chr1 194307944 194309488 CR1-E 640 - 194307944 194309488 0 2 457,1087, 0,457, -,-, 137906 LINE CR1 2068 chr1 194407799 194408401 (CACAG)n 676 + 194407799 194408401 0 2 214,212, 0,390, +,+, 137970 Simple_repeat Simple_repeat 2068 chr1 194424280 194430380 GGERV28_LTR 729 - 194424280 194430380 0 6 213,289,468,4552,214,289, 0,250,540,1008,5561,5811, -,-,-,-,-,-, 137997 LTR ERVK 2068 chr1 194451102 194451422 CR1-F2 334 - 194451102 194451422 0 2 173,93, 0,227, -,-, 138028 LINE CR1 2068 chr1 194471985 194472071 (TGCCGTG)n 326 + 194471985 194472071 0 2 29,21, 0,65, +,+, 138056 Simple_repeat Simple_repeat 2069 chr1 194540432 194541036 CR1-X 530 + 194540432 194541036 0 2 173,276, 0,328, +,+, 138137 LINE CR1 2069 chr1 194542570 194542956 CR1-C4 672 - 194542570 194542956 0 2 114,267, 0,119, -,-, 138140 LINE CR1 2069 chr1 194547807 194550457 CR1-C2 771 + 194547807 194550457 0 2 153,78, 0,2572, +,+, 138146 LINE CR1 2069 chr1 194561296 194561674 CR1-D2 523 - 194561296 194561674 0 2 108,91, 0,287, -,-, 138159 LINE CR1 2069 chr1 194585305 194588050 CR1-F2 285 + 194585305 194588050 0 2 161,460, 0,2285, +,+, 138183 LINE CR1 2069 chr1 194593214 194597172 CR1-C3 625 - 194593214 194597172 0 2 1725,1967, 0,1991, -,-, 138190 LINE CR1 2069 chr1 194606129 194617095 Char12Mar1_GG 448 - 194606129 194617095 0 2 58,58, 0,10908, -,-, 138202 DNA hAT-Charlie 2069 chr1 194606816 194610591 CR1-H 704 + 194606816 194610591 0 3 1095,2064,549, 0,1131,3226, +,+,+, 138204 LINE CR1 2070 chr1 194653488 194653808 CR1-C 480 + 194653488 194653808 0 2 90,230, 0,90, +,+, 138236 LINE CR1 2070 chr1 194661784 194664097 CR1-Y4 545 + 194661784 194664097 0 3 499,201,138, 0,500,2175, +,+,+, 138246 LINE CR1 2070 chr1 194674358 194675288 CR1-Y4 489 - 194674358 194675288 0 2 234,151, 0,779, -,-, 138258 LINE CR1 2070 chr1 194674621 194675137 GGLTR1 978 + 194674621 194675137 0 2 275,241, 0,275, +,+, 138259 LTR ERVK 2070 chr1 194702488 194702857 (ATG)n 638 + 194702488 194702857 0 2 102,87, 0,282, +,+, 138279 Simple_repeat Simple_repeat 2070 chr1 194739124 194739332 CR1-F2 577 + 194739124 194739332 0 2 108,99, 0,109, +,+, 138321 LINE CR1 2070 chr1 194744059 194744268 CR1-F2 566 + 194744059 194744268 0 2 108,100, 0,109, +,+, 138326 LINE CR1 2070 chr1 194767919 194768535 (CACTG)n 401 + 194767919 194768535 0 3 239,168,195, 0,253,421, +,+,+, 138358 Simple_repeat Simple_repeat 2071 chr1 194831675 194832435 CR1-X1 459 + 194831675 194832435 0 2 121,118, 0,642, +,+, 138413 LINE CR1 2071 chr1 194835823 194837296 CR1-X2 521 + 194835823 194837296 0 4 84,135,127,62, 0,84,806,1411, +,+,+,+, 138419 LINE CR1 2071 chr1 194838087 194838303 CR1-C4 385 + 194838087 194838303 0 2 121,95, 0,121, +,+, 138423 LINE CR1 2071 chr1 194838929 194840581 CR1-D 716 + 194838929 194840581 0 2 115,474, 0,1178, +,+, 138426 LINE CR1 2071 chr1 194842359 194842580 CR1-C4 372 - 194842359 194842580 0 2 101,120, 0,101, -,-, 138433 LINE CR1 2071 chr1 194843377 194844837 CR1-X2 546 - 194843377 194844837 0 3 62,127,216, 0,539,1244, -,-,-, 138437 LINE CR1 2071 chr1 194860155 194860634 GGLTR7-int 279 - 194860155 194860634 0 2 157,114, 0,365, -,-, 138454 LTR ERV1 2071 chr1 194867458 194869398 CR1-C 676 - 194867458 194869398 0 2 808,528, 0,1412, -,-, 138464 LINE CR1 2071 chr1 194902742 194902903 CR1-F2 548 + 194902742 194902903 0 2 75,75, 0,86, +,+, 138504 LINE CR1 2072 chr1 194913701 194915498 CR1-F2 490 - 194913701 194915498 0 2 69,79, 0,1718, -,-, 138511 LINE CR1 2072 chr1 194932095 194932489 (CATG)n 168 + 194932095 194932489 0 2 180,176, 0,218, +,+, 138533 Simple_repeat Simple_repeat 2072 chr1 194935899 194936166 CR1-F2 449 - 194935899 194936166 0 3 68,104,85, 0,78,182, -,-,-, 138537 LINE CR1 2073 chr1 195058161 195058446 Charlie12_GG 652 - 195058161 195058446 0 2 51,114, 0,171, -,-, 138655 DNA hAT-Charlie 2073 chr1 195110409 195110993 CR1-C4 576 + 195110409 195110993 0 2 218,366, 0,218, +,+, 138698 LINE CR1 2073 chr1 195125261 195126872 CR1-F2 446 - 195125261 195126872 0 2 82,195, 0,1416, -,-, 138710 LINE CR1 2073 chr1 195134403 195135980 CR1-F2 250 - 195134403 195135980 0 2 132,121, 0,1456, -,-, 138719 LINE CR1 2073 chr1 195141616 195141716 (A)n 760 + 195141616 195141716 0 2 38,27, 0,73, +,+, 138727 Simple_repeat Simple_repeat 2073 chr1 195145622 195146202 CR1-X2 506 - 195145622 195146202 0 2 471,109, 0,471, -,-, 138734 LINE CR1 2073 chr1 195154895 195155078 CR1-F2 445 - 195154895 195155078 0 2 99,84, 0,99, -,-, 138744 LINE CR1 2074 chr1 195183394 195189329 CR1-F2 603 + 195183394 195189329 0 2 378,90, 0,5845, +,+, 138767 LINE CR1 2074 chr1 195190382 195190707 CR1-D 723 + 195190382 195190707 0 2 155,170, 0,155, +,+, 138769 LINE CR1 2074 chr1 195202802 195203862 CR1-E 645 + 195202802 195203862 0 2 73,63, 0,997, +,+, 138784 LINE CR1 2074 chr1 195244588 195245342 CR1-Y2_Aves 355 - 195244588 195245342 0 3 282,74,79, 0,536,675, -,-,-, 138826 LINE CR1 2074 chr1 195252163 195252755 (TGGA)n 748 + 195252163 195252755 0 2 370,184, 0,408, +,+, 138835 Simple_repeat Simple_repeat 2074 chr1 195279132 195279402 CR1-B2 855 - 195279132 195279402 0 2 60,210, 0,60, -,-, 138862 LINE CR1 2074 chr1 195282106 195282361 GGLTR8A 479 + 195282106 195282361 0 2 119,130, 0,125, +,+, 138868 LTR ERVL 2074 chr1 195293805 195294269 CR1-F2 595 + 195293805 195294269 0 2 246,218, 0,246, +,+, 138881 LINE CR1 2075 chr1 195324908 195325040 CR1-B2 626 - 195324908 195325040 0 2 45,46, 0,86, -,-, 138923 LINE CR1 2075 chr1 195372099 195372500 (CCCTAA)n 682 + 195372099 195372500 0 2 179,180, 0,221, +,+, 138970 Simple_repeat Simple_repeat 2076 chr1 195432219 195432882 (TCCA)n 550 + 195432219 195432882 0 2 174,455, 0,208, +,+, 139031 Simple_repeat Simple_repeat 2076 chr1 195497473 195497690 CR1-E 775 - 195497473 195497690 0 2 127,88, 0,129, -,-, 139077 LINE CR1 2076 chr1 195512386 195512857 CR1-X1 590 - 195512386 195512857 0 2 54,209, 0,262, -,-, 139101 LINE CR1 2076 chr1 195523405 195524064 CR1-C4 612 - 195523405 195524064 0 2 487,172, 0,487, -,-, 139113 LINE CR1 2076 chr1 195528016 195528492 CR1-C2 511 - 195528016 195528492 0 2 105,371, 0,105, -,-, 139119 LINE CR1 2076 chr1 195530597 195532267 CR1-F2 422 + 195530597 195532267 0 2 69,255, 0,1415, +,+, 139124 LINE CR1 2076 chr1 195534358 195535087 CR1-X2 584 - 195534358 195535087 0 2 81,239, 0,490, -,-, 139130 LINE CR1 2076 chr1 195546564 195546925 CR1-F2 533 - 195546564 195546925 0 2 152,195, 0,166, -,-, 139151 LINE CR1 2077 chr1 195562872 195564888 CR1-C4 582 - 195562872 195564888 0 2 43,192, 0,1824, -,-, 139162 LINE CR1 2077 chr1 195684466 195684824 CR1-C 826 + 195684466 195684824 0 2 77,281, 0,77, +,+, 139313 LINE CR1 2078 chr1 195711568 195712282 CR1-C4 518 + 195711568 195712282 0 2 570,144, 0,570, +,+, 139337 LINE CR1 2078 chr1 195755420 195755786 CR1-E 753 - 195755420 195755786 0 2 135,231, 0,135, -,-, 139369 LINE CR1 2078 chr1 195758552 195758918 CR1-E 761 - 195758552 195758918 0 2 135,231, 0,135, -,-, 139373 LINE CR1 2078 chr1 195762076 195762442 CR1-E 720 - 195762076 195762442 0 2 135,231, 0,135, -,-, 139377 LINE CR1 2078 chr1 195765982 195766524 CR1-E 647 - 195765982 195766524 0 2 135,407, 0,135, -,-, 139380 LINE CR1 2079 chr1 195847311 195847677 (CATCC)n 508 + 195847311 195847677 0 2 148,46, 0,320, +,+, 139436 Simple_repeat Simple_repeat 2079 chr1 195849634 195849736 (CCTAT)n 200 + 195849634 195849736 0 2 13,9, 0,93, +,+, 139442 Simple_repeat Simple_repeat 2079 chr1 195851271 195852022 CR1-H2 848 + 195851271 195852022 0 2 495,256, 0,495, +,+, 139446 LINE CR1 2079 chr1 195942467 195942517 (CACCT)n 424 + 195942467 195942517 0 2 12,7, 0,43, +,+, 139524 Simple_repeat Simple_repeat 2080 chr1 195967584 195968060 X2_LINE 335 - 195967584 195968060 0 2 271,113, 0,363, -,-, 139546 LINE CR1 2080 chr1 195991266 195992750 Charlie12_GG 404 - 195991266 195992750 0 2 1044,288, 0,1196, -,-, 139569 DNA hAT-Charlie 2080 chr1 195998349 195998503 CR1-Y2_Aves 516 + 195998349 195998503 0 2 70,77, 0,77, +,+, 139581 LINE CR1 2080 chr1 196012557 196013729 CR1-D2 260 - 196012557 196013729 0 2 366,604, 0,568, -,-, 139586 LINE CR1 2080 chr1 196015322 196016363 CR1-D2 645 - 196015322 196016363 0 2 65,227, 0,814, -,-, 139590 LINE CR1 2080 chr1 196059114 196059547 GA-rich 286 + 196059114 196059547 0 2 30,370, 0,63, +,+, 139624 Low_complexity Low_complexity 2080 chr1 196064461 196064635 (ATGGTG)n 264 + 196064461 196064635 0 2 31,63, 0,111, +,+, 139637 Simple_repeat Simple_repeat 2080 chr1 196064635 196064847 CR1-H2 516 - 196064635 196064847 0 2 63,81, 0,131, -,-, 139639 LINE CR1 2080 chr1 196069274 196069639 (CCCTAA)n 576 + 196069274 196069639 0 2 112,72, 0,293, +,+, 139647 Simple_repeat Simple_repeat 32 chr1 196083041 196085003 CR1-F2 274 - 196083041 196085003 0 2 195,129, 0,1833, -,-, 139659 LINE CR1 2081 chr1 196091201 196091884 CR1-E 461 - 196091201 196091884 0 2 353,125, 0,558, -,-, 139664 LINE CR1 2081 chr1 196110624 196112301 CR1-F2 444 - 196110624 196112301 0 2 118,66, 0,1611, -,-, 139682 LINE CR1 2081 chr1 196128384 196130798 CR1-H2 499 + 196128384 196130798 0 2 89,95, 0,2319, +,+, 139698 LINE CR1 2081 chr1 196155962 196156185 CR1-F2 312 - 196155962 196156185 0 2 95,128, 0,95, -,-, 139733 LINE CR1 2081 chr1 196160638 196160737 CR1-H2 488 - 196160638 196160737 0 2 20,79, 0,20, -,-, 139740 LINE CR1 588 chr10 503867 504778 Sat-CR1_GG 174 + 503867 504778 0 2 66,40, 0,871, +,+, 139798 Satellite Satellite 588 chr10 512535 513388 GGERVL-A-int 404 + 512535 513388 0 2 792,58, 0,795, +,+, 139806 LTR ERVL 588 chr10 514873 521629 GGLTR7-int 771 - 514873 521629 0 5 589,2327,1094,2080,516, 0,589,2983,4160,6240, -,-,-,-,-, 139809 LTR ERV1 589 chr10 553450 555243 CR1-F2 536 - 553450 555243 0 2 207,1395, 0,398, -,-, 139830 LINE CR1 589 chr10 569405 570466 Charlie12_GGa 467 - 569405 570466 0 2 647,82, 0,979, -,-, 139844 DNA hAT-Charlie 589 chr10 585851 589892 GGERVL-C-int 688 - 585851 589892 0 4 545,692,225,1246, 0,545,1839,2795, -,-,-,-, 139851 LTR ERVL 589 chr10 593527 598710 CR1-D 659 - 593527 598710 0 3 978,254,425, 0,978,4758, -,-,-, 139858 LINE CR1 589 chr10 594758 598269 CR1-Y 759 - 594758 598269 0 3 605,1041,1000, 0,993,2511, -,-,-, 139859 LINE CR1 589 chr10 603305 604108 CR1-C4 567 - 603305 604108 0 2 207,580, 0,223, -,-, 139863 LINE CR1 589 chr10 604105 606930 CR1-F 441 - 604105 606930 0 3 1390,92,1258, 0,1427,1567, -,-,-, 139864 LINE CR1 589 chr10 609325 610116 GGERVL-A-int 319 + 609325 610116 0 3 117,229,80, 0,375,711, +,+,+, 139869 LTR ERVL 589 chr10 620307 620749 CR1-Y1_Aves 497 + 620307 620749 0 2 280,106, 0,336, +,+, 139883 LINE CR1 589 chr10 629676 629884 CR1-C4 500 - 629676 629884 0 2 132,76, 0,132, -,-, 139889 LINE CR1 589 chr10 639741 639949 CR1-C4 492 - 639741 639949 0 2 132,76, 0,132, -,-, 139894 LINE CR1 589 chr10 643922 644619 CR1-Y4 508 - 643922 644619 0 3 232,167,296, 0,234,401, -,-,-, 139898 LINE CR1 589 chr10 653411 653619 CR1-C4 500 - 653411 653619 0 2 132,76, 0,132, -,-, 139902 LINE CR1 590 chr10 657590 658285 CR1-Y4 507 - 657590 658285 0 3 231,167,295, 0,233,400, -,-,-, 139906 LINE CR1 590 chr10 665789 665997 CR1-C4 492 - 665789 665997 0 2 132,76, 0,132, -,-, 139911 LINE CR1 590 chr10 669970 670676 CR1-Y4 518 - 669970 670676 0 3 237,163,306, 0,237,400, -,-,-, 139915 LINE CR1 590 chr10 688112 690449 CR1-Y4 491 + 688112 690449 0 3 620,1106,64, 0,972,2273, +,+,+, 139925 LINE CR1 590 chr10 703884 704388 GGLTR3F2 798 + 703884 704388 0 3 230,143,73, 0,260,431, +,+,+, 139938 LTR ERVL 590 chr10 718958 721294 CR1-Y4 490 + 718958 721294 0 3 620,1105,64, 0,972,2272, +,+,+, 139949 LINE CR1 590 chr10 737333 739079 CR1-Y1_Aves 360 - 737333 739079 0 3 126,214,410, 0,126,1336, -,-,-, 139973 LINE CR1 590 chr10 749435 750454 CR1-Y4 548 + 749435 750454 0 2 620,63, 0,956, +,+, 139981 LINE CR1 590 chr10 755832 756767 CR1-H 798 - 755832 756767 0 2 435,500, 0,435, -,-, 139991 LINE CR1 591 chr10 841857 842200 CR1-X2 380 + 841857 842200 0 2 174,145, 0,198, +,+, 140021 LINE CR1 591 chr10 857085 858233 CR1-F2 526 + 857085 858233 0 2 275,860, 0,288, +,+, 140030 LINE CR1 591 chr10 872065 872354 CR1-Y1_Aves 477 + 872065 872354 0 2 109,150, 0,139, +,+, 140037 LINE CR1 591 chr10 883757 886125 CR1-C4 604 + 883757 886125 0 2 527,1834, 0,534, +,+, 140041 LINE CR1 591 chr10 887499 888353 CR1-F2 537 + 887499 888353 0 2 626,215, 0,639, +,+, 140042 LINE CR1 591 chr10 892323 892371 (GCAG)n 510 + 892323 892371 0 2 12,8, 0,40, +,+, 140047 Simple_repeat Simple_repeat 591 chr10 915104 916418 CR1-E 432 + 915104 916418 0 2 212,945, 0,369, +,+, 140061 LINE CR1 593 chr10 1111886 1111992 (GGAGCGC)n 448 + 1111886 1111992 0 2 42,21, 0,85, +,+, 140160 Simple_repeat Simple_repeat 594 chr10 1219633 1220832 CR1-C3 624 - 1219633 1220832 0 2 172,1027, 0,172, -,-, 140191 LINE CR1 594 chr10 1306544 1307721 CR1-D2 544 - 1306544 1307721 0 2 752,108, 0,1069, -,-, 140232 LINE CR1 74 chr10 1308193 1312283 GGLTR7-int 646 + 1308193 1312283 0 4 2950,211,91,571, 0,3217,3428,3519, +,+,+,+, 140234 LTR ERV1 595 chr10 1321980 1322105 G-rich 472 + 1321980 1322105 0 2 42,54, 0,71, +,+, 140242 Low_complexity Low_complexity 595 chr10 1333574 1334114 CR1-F2 441 + 1333574 1334114 0 2 335,199, 0,341, +,+, 140249 LINE CR1 595 chr10 1432351 1434646 CR1-C4 550 + 1432351 1434646 0 2 393,1902, 0,393, +,+, 140280 LINE CR1 597 chr10 1680789 1681325 CR1-D2 719 + 1680789 1681325 0 2 256,280, 0,256, +,+, 140379 LINE CR1 598 chr10 1758483 1759500 REP131 271 - 1758483 1759500 0 2 617,192, 0,825, -,-, 140400 DNA? DNA? 598 chr10 1760734 1760861 G-rich 542 + 1760734 1760861 0 2 66,43, 0,84, +,+, 140402 Low_complexity Low_complexity 599 chr10 1859159 1860644 CR1-F2 519 - 1859159 1860644 0 3 228,434,479, 0,571,1006, -,-,-, 140440 LINE CR1 600 chr10 2029153 2030040 CR1-E 215 + 2029153 2030040 0 2 194,445, 0,442, +,+, 140505 LINE CR1 602 chr10 2237710 2241538 CR1-F2 440 - 2237710 2241538 0 2 121,221, 0,3607, -,-, 140605 LINE CR1 602 chr10 2269655 2270009 (GATGGAG)n 292 + 2269655 2270009 0 2 238,75, 0,279, +,+, 140633 Simple_repeat Simple_repeat 602 chr10 2304267 2305247 CR1-F 565 - 2304267 2305247 0 2 430,251, 0,729, -,-, 140646 LINE CR1 602 chr10 2309890 2310618 GGLTR11 477 + 2309890 2310618 0 2 42,297, 0,431, +,+, 140648 LTR ERV1 602 chr10 2324161 2324612 CR1-X1 346 + 2324161 2324612 0 2 141,281, 0,170, +,+, 140657 LINE CR1 602 chr10 2348872 2348925 (GGCTGC)n 424 + 2348872 2348925 0 2 11,18, 0,35, +,+, 140668 Simple_repeat Simple_repeat 602 chr10 2357180 2357233 (ACCCCA)n 360 + 2357180 2357233 0 2 14,17, 0,36, +,+, 140673 Simple_repeat Simple_repeat 603 chr10 2403146 2404523 CR1-X2 429 + 2403146 2404523 0 2 1181,196, 0,1181, +,+, 140707 LINE CR1 603 chr10 2460246 2460746 CR1-H2 136 + 2460246 2460746 0 2 214,228, 0,272, +,+, 140728 LINE CR1 604 chr10 2497130 2497544 (TCCA)n 465 + 2497130 2497544 0 3 108,122,135, 0,136,279, +,+,+, 140737 Simple_repeat Simple_repeat 604 chr10 2541916 2542647 (TGGA)n 631 + 2541916 2542647 0 3 180,264,79, 0,208,652, +,+,+, 140767 Simple_repeat Simple_repeat 605 chr10 2629523 2629775 CR1-D2 478 - 2629523 2629775 0 2 114,138, 0,114, -,-, 140808 LINE CR1 605 chr10 2727422 2727629 CR1-F2 582 + 2727422 2727629 0 2 89,101, 0,106, +,+, 140867 LINE CR1 605 chr10 2727741 2727913 CR1-F2 515 + 2727741 2727913 0 2 15,98, 0,74, +,+, 140869 LINE CR1 605 chr10 2739896 2740739 CR1-D2 556 - 2739896 2740739 0 2 11,238, 0,605, -,-, 140882 LINE CR1 605 chr10 2741930 2742398 CR1-F2 682 + 2741930 2742398 0 2 123,345, 0,123, +,+, 140884 LINE CR1 605 chr10 2748459 2749065 CR1-D2 553 + 2748459 2749065 0 2 431,158, 0,448, +,+, 140891 LINE CR1 607 chr10 2982248 2982473 Char12Mar1_GG 603 - 2982248 2982473 0 2 132,92, 0,133, -,-, 140979 DNA hAT-Charlie 607 chr10 2995797 2996044 CR1-C4 621 + 2995797 2996044 0 2 137,110, 0,137, +,+, 140981 LINE CR1 607 chr10 3011458 3012273 CR1-C3 692 + 3011458 3012273 0 2 574,241, 0,574, +,+, 140987 LINE CR1 608 chr10 3042597 3057569 Char12Mar1_GG 532 - 3042597 3057569 0 2 104,118, 0,14854, -,-, 141002 DNA hAT-Charlie 608 chr10 3071961 3072016 A-rich 430 + 3071961 3072016 0 2 22,13, 0,42, +,+, 141010 Low_complexity Low_complexity 608 chr10 3106899 3107305 GGLTR5B 413 + 3106899 3107305 0 2 146,260, 0,146, +,+, 141024 LTR ERVL 608 chr10 3141599 3142427 CR1-F2 513 - 3141599 3142427 0 2 133,342, 0,486, -,-, 141045 LINE CR1 610 chr10 3338720 3338927 Char12Mar1_GG 693 - 3338720 3338927 0 2 107,100, 0,107, -,-, 141139 DNA hAT-Charlie 610 chr10 3381541 3382401 CR1-X1 486 - 3381541 3382401 0 2 568,292, 0,568, -,-, 141163 LINE CR1 610 chr10 3389050 3402878 REP131 385 - 3389050 3402878 0 2 118,59, 0,13769, -,-, 141166 DNA? DNA? 614 chr10 3875094 3876304 Char12Mar1_GG 572 - 3875094 3876304 0 2 98,408, 0,802, -,-, 141327 DNA hAT-Charlie 618 chr10 4381461 4385508 CR1-11_Crp 404 - 4381461 4385508 0 2 92,75, 0,3972, -,-, 141525 LINE CR1 618 chr10 4387877 4392982 CR1-F2 469 + 4387877 4392982 0 2 90,802, 0,4303, +,+, 141532 LINE CR1 620 chr10 4645676 4645760 (CTTT)n 274 + 4645676 4645760 0 2 6,42, 0,42, +,+, 141645 Simple_repeat Simple_repeat 621 chr10 4724352 4724453 (A)n 957 + 4724352 4724453 0 2 24,24, 0,77, +,+, 141685 Simple_repeat Simple_repeat 622 chr10 4850952 4852018 CR1-X2 262 - 4850952 4852018 0 2 740,306, 0,760, -,-, 141731 LINE CR1 622 chr10 4863486 4863800 CR1-Y4 702 - 4863486 4863800 0 2 255,59, 0,255, -,-, 141738 LINE CR1 622 chr10 4951146 4951199 (ATACTAT)n 594 + 4951146 4951199 0 2 12,11, 0,42, +,+, 141767 Simple_repeat Simple_repeat 624 chr10 5162797 5164485 CR1-C3 632 + 5162797 5164485 0 3 432,620,632, 0,432,1056, +,+,+, 141870 LINE CR1 625 chr10 5243836 5244482 GGLTR5A 317 - 5243836 5244482 0 2 187,415, 0,231, -,-, 141911 LTR ERVL 626 chr10 5399069 5399264 (TA)n 386 + 5399069 5399264 0 2 13,19, 0,176, +,+, 141976 Simple_repeat Simple_repeat 627 chr10 5544525 5545014 TguLTR5e 446 + 5544525 5545014 0 2 263,131, 0,358, +,+, 142032 LTR ERVL 628 chr10 5758942 5759752 CR1-G 510 - 5758942 5759752 0 2 211,599, 0,211, -,-, 142130 LINE CR1 629 chr10 5771762 5772924 CR1-D2 686 + 5771762 5772924 0 2 342,820, 0,342, +,+, 142134 LINE CR1 629 chr10 5845453 5845763 CR1-C4 675 + 5845453 5845763 0 2 251,50, 0,260, +,+, 142171 LINE CR1 633 chr10 6326310 6326851 REP131 291 - 6326310 6326851 0 2 274,121, 0,420, -,-, 142351 DNA? DNA? 633 chr10 6389687 6390009 Charlie12_GG 485 - 6389687 6390009 0 2 178,59, 0,263, -,-, 142381 DNA hAT-Charlie 634 chr10 6456167 6456966 CR1-Y2_Aves 215 - 6456167 6456966 0 3 185,250,313, 0,207,486, -,-,-, 142404 LINE CR1 634 chr10 6492847 6493221 CR1-Y4 585 + 6492847 6493221 0 2 45,329, 0,45, +,+, 142420 LINE CR1 638 chr10 6971089 6972543 CR1-F 509 - 6971089 6972543 0 2 1233,190, 0,1264, -,-, 142625 LINE CR1 645 chr10 7908292 7908873 GGLTR8B 285 - 7908292 7908873 0 2 254,131, 0,450, -,-, 142974 LTR ERVL 648 chr10 8300591 8302018 Mariner1_GG 512 - 8300591 8302018 0 2 635,360, 0,1067, -,-, 143131 DNA TcMar-Mariner 649 chr10 8400496 8400888 GGLTR5A 378 + 8400496 8400888 0 2 173,198, 0,194, +,+, 143173 LTR ERVL 649 chr10 8445961 8446480 CR1-Y1_Aves 504 - 8445961 8446480 0 2 183,281, 0,238, -,-, 143189 LINE CR1 651 chr10 8658199 8658277 (GCGG)n 402 + 8658199 8658277 0 2 16,6, 0,72, +,+, 143272 Simple_repeat Simple_repeat 651 chr10 8685396 8685460 G-rich 374 + 8685396 8685460 0 2 13,16, 0,48, +,+, 143286 Low_complexity Low_complexity 652 chr10 8808799 8809286 CR1-C2 829 - 8808799 8809286 0 2 430,57, 0,430, -,-, 143330 LINE CR1 652 chr10 8865277 8866075 CR1-F2 531 - 8865277 8866075 0 3 68,625,74, 0,96,724, -,-,-, 143353 LINE CR1 653 chr10 8925260 8925336 (GCC)n 524 + 8925260 8925336 0 2 23,27, 0,49, +,+, 143368 Simple_repeat Simple_repeat 653 chr10 8948718 8949072 CR1-E 554 - 8948718 8949072 0 2 309,45, 0,309, -,-, 143381 LINE CR1 653 chr10 9002174 9002833 CR1-C4 524 - 9002174 9002833 0 2 91,568, 0,91, -,-, 143398 LINE CR1 656 chr10 9346992 9347261 Mariner1b_GG 679 - 9346992 9347261 0 2 125,144, 0,125, -,-, 143520 DNA TcMar-Mariner 659 chr10 9770577 9771158 CR1-C3 641 - 9770577 9771158 0 2 405,79, 0,502, -,-, 143737 LINE CR1 660 chr10 9834373 9835019 CR1-Y2_Aves 84 + 9834373 9835019 0 2 201,266, 0,380, +,+, 143764 LINE CR1 660 chr10 9920048 9920604 CR1-Y4 687 - 9920048 9920604 0 2 167,34, 0,522, -,-, 143802 LINE CR1 661 chr10 10035222 10036070 GGLTR4B 767 - 10035222 10036070 0 2 199,90, 0,758, -,-, 143839 LTR ERVL 661 chr10 10035437 10036027 CR1-C 820 - 10035437 10036027 0 2 305,285, 0,305, -,-, 143840 LINE CR1 662 chr10 10136931 10137304 CR1-D2 514 - 10136931 10137304 0 2 260,112, 0,261, -,-, 143890 LINE CR1 662 chr10 10141741 10142155 Char12Mar1_GG 620 - 10141741 10142155 0 2 251,159, 0,255, -,-, 143896 DNA hAT-Charlie 663 chr10 10239608 10239933 GGERV10_LTR 668 + 10239608 10239933 0 2 78,160, 0,165, +,+, 143924 LTR ERVL 663 chr10 10264938 10266484 CR1-L3A_Croc 54 - 10264938 10266484 0 2 179,497, 0,1049, -,-, 143940 LINE CR1 663 chr10 10265360 10265647 Char12Mar1_GG 664 - 10265360 10265647 0 2 125,162, 0,125, -,-, 143941 DNA hAT-Charlie 664 chr10 10363826 10366488 CR1-D2 654 + 10363826 10366488 0 2 358,281, 0,2381, +,+, 143996 LINE CR1 664 chr10 10369446 10369652 GGLTR8B 506 + 10369446 10369652 0 2 139,67, 0,139, +,+, 143999 LTR ERVL 664 chr10 10406905 10406986 (TACA)n 346 + 10406905 10406986 0 2 24,29, 0,52, +,+, 144015 Simple_repeat Simple_repeat 666 chr10 10623411 10623553 Char12Mar1_GG 682 - 10623411 10623553 0 2 63,79, 0,63, -,-, 144092 DNA hAT-Charlie 666 chr10 10731620 10732272 CR1-F2 520 - 10731620 10732272 0 2 480,167, 0,485, -,-, 144127 LINE CR1 666 chr10 10746334 10746698 TguLTR5e 377 - 10746334 10746698 0 2 222,97, 0,267, -,-, 144137 LTR ERVL 667 chr10 10781212 10781974 CR1-Y4 532 + 10781212 10781974 0 2 557,205, 0,557, +,+, 144154 LINE CR1 667 chr10 10852553 10852839 Char12Mar1_GG 720 - 10852553 10852839 0 3 69,40,173, 0,69,113, -,-,-, 144183 DNA hAT-Charlie 668 chr10 10894057 10894581 CR1-E 396 - 10894057 10894581 0 2 312,177, 0,347, -,-, 144192 LINE CR1 669 chr10 11021159 11021755 CR1-L3A_Croc 211 - 11021159 11021755 0 2 250,310, 0,286, -,-, 144248 LINE CR1 673 chr10 11541481 11542380 CR1-L3B_Croc 268 - 11541481 11542380 0 3 88,81,450, 0,206,449, -,-,-, 144474 LINE CR1 675 chr10 11808716 11809023 CR1-C4 725 + 11808716 11809023 0 2 184,123, 0,184, +,+, 144584 LINE CR1 676 chr10 11956264 11956977 CR1-Y2_Aves 211 - 11956264 11956977 0 2 111,248, 0,465, -,-, 144626 LINE CR1 677 chr10 12114292 12114649 CR1-D2 582 - 12114292 12114649 0 2 176,154, 0,203, -,-, 144697 LINE CR1 681 chr10 12653379 12654246 CR1-F2 438 + 12653379 12654246 0 2 634,233, 0,634, +,+, 144929 LINE CR1 681 chr10 12671433 12672062 CR1-D2 529 + 12671433 12672062 0 2 314,315, 0,314, +,+, 144940 LINE CR1 682 chr10 12767516 12767592 (CCTCCC)n 358 + 12767516 12767592 0 2 11,37, 0,39, +,+, 145004 Simple_repeat Simple_repeat 682 chr10 12782243 12782289 (TGT)n 454 + 12782243 12782289 0 2 13,9, 0,37, +,+, 145021 Simple_repeat Simple_repeat 683 chr10 12845673 12845714 (GTTTT)n 692 + 12845673 12845714 0 2 7,7, 0,34, +,+, 145052 Simple_repeat Simple_repeat 683 chr10 12905126 12905172 GA-rich 564 + 12905126 12905172 0 2 11,11, 0,35, +,+, 145090 Low_complexity Low_complexity 683 chr10 12937603 12937741 A-rich 610 + 12937603 12937741 0 2 52,34, 0,104, +,+, 145125 Low_complexity Low_complexity 684 chr10 13074073 13075095 CR1-L3B_Croc 241 + 13074073 13075095 0 2 603,317, 0,705, +,+, 145181 LINE CR1 685 chr10 13115789 13117253 CR1-D2 644 + 13115789 13117253 0 2 289,90, 0,1374, +,+, 145206 LINE CR1 685 chr10 13203932 13204385 CR1-X2 304 + 13203932 13204385 0 2 87,96, 0,357, +,+, 145262 LINE CR1 685 chr10 13219583 13221763 CR1-F2 478 - 13219583 13221763 0 2 118,189, 0,1991, -,-, 145274 LINE CR1 686 chr10 13366698 13367114 UCON29 306 - 13366698 13367114 0 2 90,154, 0,262, -,-, 145374 DNA Kolobok 687 chr10 13385994 13387046 UCON27 388 + 13385994 13387046 0 2 113,286, 0,766, +,+, 145387 Unknown Unknown 687 chr10 13478745 13479587 CR1-L3A_Croc 61 - 13478745 13479587 0 2 313,238, 0,604, -,-, 145450 LINE CR1 688 chr10 13625612 13626074 CR1-C4 633 + 13625612 13626074 0 2 102,360, 0,102, +,+, 145537 LINE CR1 689 chr10 13683635 13684050 AmnSINE1 319 + 13683635 13684050 0 2 88,155, 0,260, +,+, 145571 SINE 5S-Deu-L2 689 chr10 13694517 13695833 CR1-3_Croc 131 + 13694517 13695833 0 2 173,256, 0,1060, +,+, 145579 LINE CR1 689 chr10 13724985 13725319 CR1-C4 657 - 13724985 13725319 0 2 160,170, 0,164, -,-, 145592 LINE CR1 689 chr10 13734092 13735267 CR1-L3B_Croc 264 - 13734092 13735267 0 3 82,577,135, 0,340,1040, -,-,-, 145594 LINE CR1 690 chr10 13818451 13818492 (ATGTAT)n 594 + 13818451 13818492 0 2 6,8, 0,33, +,+, 145629 Simple_repeat Simple_repeat 695 chr10 14461686 14463518 CR1-F2 363 + 14461686 14463518 0 2 144,79, 0,1753, +,+, 145881 LINE CR1 697 chr10 14690977 14692015 CR1-L3B_Croc 281 - 14690977 14692015 0 2 276,198, 0,840, -,-, 145959 LINE CR1 699 chr10 15063271 15063395 Mariner1_GG 745 - 15063271 15063395 0 2 90,34, 0,90, -,-, 146133 DNA TcMar-Mariner 701 chr10 15210384 15210652 CR1-Y4 695 + 15210384 15210652 0 2 154,106, 0,162, +,+, 146213 LINE CR1 701 chr10 15252766 15253117 GGLTR4B 494 + 15252766 15253117 0 3 83,124,77, 0,113,274, +,+,+, 146240 LTR ERVL 701 chr10 15271314 15271373 (TTCTT)n 650 + 15271314 15271373 0 2 8,10, 0,49, +,+, 146257 Simple_repeat Simple_repeat 702 chr10 15369477 15369536 (TCTT)n 498 + 15369477 15369536 0 2 23,6, 0,53, +,+, 146335 Simple_repeat Simple_repeat 702 chr10 15381827 15382028 GGLTR4B 683 + 15381827 15382028 0 2 90,111, 0,90, +,+, 146348 LTR ERVL 704 chr10 15661684 15661854 GA-rich 338 + 15661684 15661854 0 2 109,16, 0,154, +,+, 146499 Low_complexity Low_complexity 705 chr10 15733017 15733606 CR1-C4 228 - 15733017 15733606 0 2 246,132, 0,457, -,-, 146539 LINE CR1 705 chr10 15794056 15794279 UCON66 325 - 15794056 15794279 0 2 105,105, 0,118, -,-, 146567 Unknown Unknown 705 chr10 15832992 15833088 (CCCGCC)n 284 + 15832992 15833088 0 2 25,22, 0,74, +,+, 146581 Simple_repeat Simple_repeat 707 chr10 16090319 16091305 L2-1_AMi 213 - 16090319 16091305 0 2 642,173, 0,813, -,-, 146791 LINE L2 708 chr10 16143609 16144296 CR1-11_Crp 380 - 16143609 16144296 0 2 114,140, 0,547, -,-, 146807 LINE CR1 719 chr10 17682289 17683124 CR1-G 852 + 17682289 17683124 0 2 334,483, 0,352, +,+, 147349 LINE CR1 720 chr10 17782726 17782991 CR1-X1 598 - 17782726 17782991 0 2 156,109, 0,156, -,-, 147386 LINE CR1 720 chr10 17823110 17823517 CR1-D2 665 - 17823110 17823517 0 2 306,101, 0,306, -,-, 147397 LINE CR1 721 chr10 17829670 17830061 CR1-X1 515 + 17829670 17830061 0 2 128,86, 0,305, +,+, 147400 LINE CR1 721 chr10 17831817 17832431 CR1-D2 692 - 17831817 17832431 0 2 91,73, 0,541, -,-, 147404 LINE CR1 722 chr10 17997122 17997663 CR1-Y2_Aves 343 - 17997122 17997663 0 2 259,220, 0,321, -,-, 147482 LINE CR1 723 chr10 18102149 18102194 (GCACAG)n 472 + 18102149 18102194 0 2 8,18, 0,27, +,+, 147521 Simple_repeat Simple_repeat 727 chr10 18664012 18664231 CR1-F2 326 + 18664012 18664231 0 2 140,79, 0,140, +,+, 147720 LINE CR1 728 chr10 18757077 18757264 CR1-H 388 - 18757077 18757264 0 2 49,125, 0,62, -,-, 147775 LINE CR1 729 chr10 18895311 18895856 CR1-D2 485 - 18895311 18895856 0 2 97,448, 0,97, -,-, 147826 LINE CR1 730 chr10 19087703 19087797 (CGGCCG)n 298 + 19087703 19087797 0 2 11,42, 0,52, +,+, 147903 Simple_repeat Simple_repeat 737 chr10 19932792 19932891 (GTCCC)n 306 + 19932792 19932891 0 2 40,7, 0,92, +,+, 148280 Simple_repeat Simple_repeat 737 chr10 20036121 20036617 GGLTR8B 269 + 20036121 20036617 0 2 223,212, 0,284, +,+, 148332 LTR ERVL 738 chr10 20059257 20059361 (GCGT)n 338 + 20059257 20059361 0 2 58,18, 0,86, +,+, 148361 Simple_repeat Simple_repeat 739 chr10 20206482 20208992 CR1-C4 295 + 20206482 20208992 0 2 238,136, 0,2374, +,+, 148441 LINE CR1 739 chr10 20311289 20311353 (ATGT)n 352 + 20311289 20311353 0 2 32,13, 0,51, +,+, 148485 Simple_repeat Simple_repeat 740 chr10 20360603 20365699 CR1-Y2 525 + 20360603 20365699 0 2 236,221, 0,4875, +,+, 148525 LINE CR1 740 chr10 20418089 20420047 CR1-C 555 - 20418089 20420047 0 2 825,408, 0,1550, -,-, 148555 LINE CR1 740 chr10 20424129 20425840 CR1-G 520 - 20424129 20425840 0 3 386,159,593, 0,703,1118, -,-,-, 148564 LINE CR1 585 chr10_NT_461734v1_random 2501 3167 CR1-Y4 451 - 2501 3167 0 3 211,156,296, 0,214,370, -,-,-, 148571 LINE CR1 585 chr10_NT_461734v1_random 12036 12244 CR1-C4 500 - 12036 12244 0 2 132,76, 0,132, -,-, 148576 LINE CR1 585 chr10_NT_461734v1_random 16217 16912 CR1-Y4 511 - 16217 16912 0 3 231,167,295, 0,233,400, -,-,-, 148580 LINE CR1 585 chr10_NT_461734v1_random 28364 28868 GGLTR3F2 802 + 28364 28868 0 3 230,143,73, 0,260,431, +,+,+, 148588 LTR ERVL 585 chr10_NT_461736v1_random 4664 5355 CR1-Y4 511 + 4664 5355 0 3 292,156,231, 0,294,460, +,+,+, 148605 LINE CR1 585 chr10_NT_461736v1_random 9327 9535 CR1-C4 492 + 9327 9535 0 2 87,121, 0,87, +,+, 148610 LINE CR1 585 chr10_NT_461736v1_random 11579 12092 GGLTR8B 450 + 11579 12092 0 2 116,249, 0,264, +,+, 148611 LTR ERVL 585 chr10_NT_461737v1_random 7657 9292 CR1-F2 344 + 7657 9292 0 2 163,920, 0,715, +,+, 148619 LINE CR1 585 chr10_NT_461738v1_random 8642 8850 CR1-C4 488 + 8642 8850 0 2 87,121, 0,87, +,+, 148628 LINE CR1 585 chr10_NT_461738v1_random 10894 11407 GGLTR8B 425 + 10894 11407 0 2 116,249, 0,264, +,+, 148629 LTR ERVL 585 chr10_NT_461738v1_random 17644 18339 CR1-Y4 497 + 17644 18339 0 3 284,167,239, 0,286,456, +,+,+, 148632 LINE CR1 585 chr10_NT_461745v1_random 6793 7501 Sat-CR1_GG 188 + 6793 7501 0 2 20,180, 0,528, +,+, 148689 Satellite Satellite 585 chr10_NT_461747v1_random 9359 9952 CR1-C 810 - 9359 9952 0 2 307,286, 0,307, -,-, 148698 LINE CR1 585 chr10_NT_461752v1_random 4417 4885 CR1-F2 682 + 4417 4885 0 2 123,345, 0,123, +,+, 148742 LINE CR1 585 chr10_NT_461752v1_random 10967 11403 CR1-D2 600 + 10967 11403 0 2 244,158, 0,278, +,+, 148749 LINE CR1 585 chr10_NT_461772v1_random 7603 7863 CR1-F0 462 - 7603 7863 0 3 34,26,89, 0,128,171, -,-,-, 148824 LINE CR1 585 chr10_NT_461793v1_random 746 842 (CCCGCC)n 284 + 746 842 0 2 25,22, 0,74, +,+, 148897 Simple_repeat Simple_repeat 585 chr10_NT_461804v1_random 2578 3172 CR1-L3A_Croc 228 - 2578 3172 0 2 248,310, 0,284, -,-, 148933 LINE CR1 585 chr11 11467 36891 GGXHOI 456 + 11467 36891 0 38 390,1473,497,274,768,192,562,192,314,332,646,1559,810,767,151,356,810,975,562,232,938,562,232,151,562,850,232,1392,521,192,562,232,151,437,232,1390,2414,1494, 0,406,1908,2421,2711,3495,3703,4281,4489,4845,5194,5857,7473,8299,9123,9290,9703,10529,11521,12100,12348,13343,13922,14211,14419,15039,15906,16154,17563,18100,18349,18928,19217,19384,19838,20086,21493,23930, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 149050 Satellite W-chromosome 585 chr11 37209 50365 GGXHOI 441 + 37209 50365 0 13 351,428,1893,408,561,272,2261,594,2471,1184,282,1556,595, 0,367,806,2740,3205,3783,4074,6351,6970,9457,10690,10989,12561, +,+,+,+,+,+,+,+,+,+,+,+,+, 149051 Satellite W-chromosome 585 chr11 62076 62694 GGERVL-B-int 757 - 62076 62694 0 2 147,469, 0,149, -,-, 149054 LTR ERVL 585 chr11 78284 80609 CR1-D 544 + 78284 80609 0 2 811,802, 0,1523, +,+, 149066 LINE CR1 585 chr11 83032 85652 Z-REP 558 + 83032 85652 0 2 1117,775, 0,1845, +,+, 149070 Satellite macro 585 chr11 91471 97282 GGLTR3F1 900 + 91471 97282 0 2 494,5316, 0,495, +,+, 149074 LTR ERVL 585 chr11 97282 97812 GGLTR3F1 936 + 97282 97812 0 2 36,494, 0,36, +,+, 149075 LTR ERVL 587 chr11 320302 320587 CR1-G 263 - 320302 320587 0 2 189,96, 0,189, -,-, 149165 LINE CR1 587 chr11 333476 333784 CR1-D2 580 - 333476 333784 0 2 95,184, 0,124, -,-, 149172 LINE CR1 588 chr11 512014 513900 CR1-C4 525 + 512014 513900 0 2 123,140, 0,1746, +,+, 149258 LINE CR1 588 chr11 513077 513223 CR1-X1 502 + 513077 513223 0 2 84,62, 0,84, +,+, 149260 LINE CR1 589 chr11 544609 544981 CR1-G 793 - 544609 544981 0 2 271,101, 0,271, -,-, 149285 LINE CR1 589 chr11 609635 609784 CR1-E 463 - 609635 609784 0 2 69,69, 0,80, -,-, 149330 LINE CR1 589 chr11 610084 610696 CR1-C4 213 - 610084 610696 0 2 442,168, 0,444, -,-, 149332 LINE CR1 589 chr11 628914 629205 CR1-X 547 + 628914 629205 0 3 105,57,129, 0,105,162, +,+,+, 149342 LINE CR1 589 chr11 630811 633765 GGERV28_I-int 139 + 630811 633765 0 2 504,1979, 0,975, +,+, 149344 LTR ERVK 589 chr11 636777 638687 GGLTR7-int 426 - 636777 638687 0 4 198,281,196,86, 0,456,1576,1824, -,-,-,-, 149345 LTR ERV1 591 chr11 806119 806868 CR1-C3 469 - 806119 806868 0 2 152,597, 0,152, -,-, 149438 LINE CR1 591 chr11 807028 807527 CR1-H 720 + 807028 807527 0 2 358,111, 0,388, +,+, 149439 LINE CR1 591 chr11 808349 809408 CR1-H 758 + 808349 809408 0 2 724,271, 0,788, +,+, 149443 LINE CR1 591 chr11 814026 814859 CR1-C3 461 - 814026 814859 0 2 148,685, 0,148, -,-, 149448 LINE CR1 591 chr11 820665 821504 CR1-C3 496 - 820665 821504 0 2 152,687, 0,152, -,-, 149455 LINE CR1 591 chr11 844797 845349 Charlie12_GG 291 - 844797 845349 0 2 261,152, 0,400, -,-, 149476 DNA hAT-Charlie 591 chr11 863106 863536 CR1-F2 465 + 863106 863536 0 2 51,228, 0,202, +,+, 149489 LINE CR1 591 chr11 873954 874371 CR1-L3B_Croc 358 - 873954 874371 0 2 63,169, 0,248, -,-, 149497 LINE CR1 592 chr11 924628 925280 GGLTR8B 373 - 924628 925280 0 2 153,395, 0,257, -,-, 149533 LTR ERVL 593 chr11 1121410 1126029 CR1-Y2_Aves 274 + 1121410 1126029 0 2 91,91, 0,4528, +,+, 149636 LINE CR1 593 chr11 1141833 1142207 (TCCA)n 402 + 1141833 1142207 0 2 174,174, 0,200, +,+, 149644 Simple_repeat Simple_repeat 594 chr11 1259930 1260331 CR1-D2 461 + 1259930 1260331 0 2 238,160, 0,241, +,+, 149699 LINE CR1 595 chr11 1355548 1356096 CR1-L3B_Croc 247 - 1355548 1356096 0 2 188,116, 0,432, -,-, 149740 LINE CR1 595 chr11 1388404 1389035 CR1-F2 470 - 1388404 1389035 0 2 285,331, 0,300, -,-, 149756 LINE CR1 596 chr11 1545842 1546806 CR1-C4 563 + 1545842 1546806 0 2 734,230, 0,734, +,+, 149832 LINE CR1 597 chr11 1657697 1661072 CR1-C 696 + 1657697 1661072 0 2 83,97, 0,3278, +,+, 149886 LINE CR1 597 chr11 1687844 1688215 CR1-F2 402 - 1687844 1688215 0 2 95,276, 0,95, -,-, 149907 LINE CR1 598 chr11 1708734 1709242 CR1-C 793 + 1708734 1709242 0 2 349,127, 0,381, +,+, 149916 LINE CR1 598 chr11 1733208 1733735 CR1-D2 664 - 1733208 1733735 0 2 330,197, 0,330, -,-, 149929 LINE CR1 598 chr11 1766406 1766987 (GGATG)n 534 + 1766406 1766987 0 2 361,38, 0,543, +,+, 149956 Simple_repeat Simple_repeat 599 chr11 1885572 1885851 CR1-E 746 + 1885572 1885851 0 3 42,47,186, 0,46,93, +,+,+, 150012 LINE CR1 599 chr11 1925557 1926307 CR1-Y2_Aves 42 - 1925557 1926307 0 2 311,403, 0,347, -,-, 150027 LINE CR1 601 chr11 2126911 2127942 CR1-B 899 + 2126911 2127942 0 2 509,522, 0,509, +,+, 150119 LINE CR1 601 chr11 2146080 2151123 CR1-X 380 - 2146080 2151123 0 2 90,200, 0,4843, -,-, 150122 LINE CR1 601 chr11 2168898 2170149 CR1-D2 590 - 2168898 2170149 0 2 1164,87, 0,1164, -,-, 150129 LINE CR1 601 chr11 2189139 2189689 CR1-F2 306 + 2189139 2189689 0 2 207,181, 0,369, +,+, 150145 LINE CR1 602 chr11 2244752 2245290 CR1-D2 648 - 2244752 2245290 0 2 279,242, 0,296, -,-, 150164 LINE CR1 602 chr11 2262143 2262807 Char12Mar1_GG 677 - 2262143 2262807 0 2 202,185, 0,479, -,-, 150175 DNA hAT-Charlie 602 chr11 2328061 2328948 CR1-F2 529 + 2328061 2328948 0 3 139,384,181, 0,322,706, +,+,+, 150219 LINE CR1 603 chr11 2469226 2471535 CR1-F 229 - 2469226 2471535 0 2 1809,496, 0,1813, -,-, 150298 LINE CR1 604 chr11 2512574 2513926 CR1-C4 762 - 2512574 2513926 0 2 31,1321, 0,31, -,-, 150319 LINE CR1 605 chr11 2738147 2738438 CR1-C2 652 + 2738147 2738438 0 2 20,161, 0,130, +,+, 150421 LINE CR1 605 chr11 2745615 2745979 GGLTR3G1 807 + 2745615 2745979 0 2 40,324, 0,40, +,+, 150432 LTR ERVL 606 chr11 2755056 2755101 (CTTTT)n 556 + 2755056 2755101 0 2 6,12, 0,33, +,+, 150437 Simple_repeat Simple_repeat 606 chr11 2759457 2759501 (CTTTT)n 560 + 2759457 2759501 0 2 6,12, 0,32, +,+, 150441 Simple_repeat Simple_repeat 606 chr11 2772502 2772548 (CTTTT)n 548 + 2772502 2772548 0 2 6,12, 0,34, +,+, 150449 Simple_repeat Simple_repeat 606 chr11 2781315 2782014 Sat-CR1_GG 230 + 2781315 2782014 0 2 386,27, 0,672, +,+, 150457 Satellite Satellite 606 chr11 2782133 2782608 Sat-CR1_GG 218 - 2782133 2782608 0 2 291,19, 0,456, -,-, 150459 Satellite Satellite 606 chr11 2793580 2794047 Sat-CR1_GG 272 - 2793580 2794047 0 2 120,19, 0,448, -,-, 150480 Satellite Satellite 606 chr11 2798244 2800817 Sat-CR1_GG 259 - 2798244 2800817 0 3 322,119,19, 0,2107,2554, -,-,-, 150490 Satellite Satellite 606 chr11 2799010 2799907 Sat-CR1_GG 218 + 2799010 2799907 0 2 301,428, 0,469, +,+, 150491 Satellite Satellite 606 chr11 2801615 2802251 Sat-CR1_GG 208 + 2801615 2802251 0 2 295,57, 0,579, +,+, 150495 Satellite Satellite 606 chr11 2803060 2804255 Sat-CR1_GG 232 + 2803060 2804255 0 2 883,27, 0,1168, +,+, 150499 Satellite Satellite 610 chr11 3305656 3307458 Sat-CR1_GG 208 - 3305656 3307458 0 4 902,340,81,19, 0,1101,1454,1783, -,-,-,-, 150504 Satellite Satellite 610 chr11 3308738 3310558 Sat-CR1_GG 222 - 3308738 3310558 0 3 918,435,19, 0,1118,1801, -,-,-, 150509 Satellite Satellite 610 chr11 3311838 3313658 Sat-CR1_GG 222 - 3311838 3313658 0 3 918,435,19, 0,1118,1801, -,-,-, 150514 Satellite Satellite 610 chr11 3314938 3316759 Sat-CR1_GG 200 - 3314938 3316759 0 3 920,434,19, 0,1120,1802, -,-,-, 150519 Satellite Satellite 610 chr11 3318038 3319857 Sat-CR1_GG 202 - 3318038 3319857 0 3 917,435,19, 0,1117,1800, -,-,-, 150525 Satellite Satellite 610 chr11 3321137 3322954 Sat-CR1_GG 196 - 3321137 3322954 0 3 918,540,19, 0,1118,1798, -,-,-, 150530 Satellite Satellite 611 chr11 3452161 3452251 (ATTTTA)n 382 + 3452161 3452251 0 2 54,6, 0,84, +,+, 150602 Simple_repeat Simple_repeat 611 chr11 3520927 3521245 GGERV10_LTR 645 + 3520927 3521245 0 2 62,149, 0,169, +,+, 150640 LTR ERVL 612 chr11 3549168 3549709 GGERV10_LTR 936 + 3549168 3549709 0 2 322,219, 0,322, +,+, 150653 LTR ERVL 614 chr11 3887353 3888296 CR1-C4 523 - 3887353 3888296 0 2 679,264, 0,679, -,-, 150773 LINE CR1 617 chr11 4288420 4288475 (TTCTTC)n 530 + 4288420 4288475 0 2 6,10, 0,45, +,+, 150955 Simple_repeat Simple_repeat 625 chr11 5325838 5325918 (GGTTTTT)n 326 + 5325838 5325918 0 2 20,30, 0,50, +,+, 151343 Simple_repeat Simple_repeat 627 chr11 5526673 5526717 (TGTTTT)n 506 + 5526673 5526717 0 2 8,9, 0,35, +,+, 151463 Simple_repeat Simple_repeat 628 chr11 5750171 5750496 CR1-Y2_Aves 122 - 5750171 5750496 0 2 148,147, 0,178, -,-, 151583 LINE CR1 629 chr11 5812401 5813960 Char12Mar1_GG 523 - 5812401 5813960 0 3 567,59,357, 0,569,1202, -,-,-, 151617 DNA hAT-Charlie 630 chr11 5955290 5956905 CR1-H 205 + 5955290 5956905 0 2 361,1253, 0,362, +,+, 151681 LINE CR1 630 chr11 6024400 6024712 CR1-E 454 - 6024400 6024712 0 2 247,40, 0,272, -,-, 151716 LINE CR1 631 chr11 6083002 6083446 CR1-C4 642 + 6083002 6083446 0 2 154,280, 0,164, +,+, 151757 LINE CR1 631 chr11 6096608 6098716 CR1-C3 675 - 6096608 6098716 0 2 992,1116, 0,992, -,-, 151761 LINE CR1 631 chr11 6152764 6153155 UCON20 499 - 6152764 6153155 0 2 228,163, 0,228, -,-, 151794 Unknown Unknown 632 chr11 6166563 6166776 UCON8 252 - 6166563 6166776 0 2 166,17, 0,196, -,-, 151801 DNA DNA 635 chr11 6613386 6613851 CR1-L3B_Croc 276 + 6613386 6613851 0 2 114,111, 0,354, +,+, 152008 LINE CR1 635 chr11 6631138 6631440 CR1-C4 720 - 6631138 6631440 0 2 56,246, 0,56, -,-, 152015 LINE CR1 636 chr11 6753716 6754374 CR1-Y2_Aves 154 + 6753716 6754374 0 2 309,335, 0,323, +,+, 152066 LINE CR1 636 chr11 6758478 6759002 CR1-D2 696 - 6758478 6759002 0 2 221,301, 0,223, -,-, 152068 LINE CR1 637 chr11 6909304 6909850 GGLTR8B 195 - 6909304 6909850 0 2 179,282, 0,264, -,-, 152119 LTR ERVL 641 chr11 7391864 7392341 GGLTR6 525 + 7391864 7392341 0 3 164,109,137, 0,221,340, +,+,+, 152331 LTR ERVL 642 chr11 7575877 7576551 CR1-F 282 - 7575877 7576551 0 2 359,237, 0,437, -,-, 152406 LINE CR1 646 chr11 8080731 8081144 CR1-Y2_Aves 255 - 8080731 8081144 0 2 164,239, 0,174, -,-, 152579 LINE CR1 648 chr11 8263472 8264299 CR1-Y4 596 - 8263472 8264299 0 2 696,131, 0,696, -,-, 152647 LINE CR1 648 chr11 8343545 8343844 Char12Mar1_GG 640 - 8343545 8343844 0 2 243,56, 0,243, -,-, 152678 DNA hAT-Charlie 650 chr11 8526401 8527135 CR1-D2 618 - 8526401 8527135 0 2 616,118, 0,616, -,-, 152734 LINE CR1 650 chr11 8563888 8565604 GGERVL18-int 451 + 8563888 8565604 0 3 261,1176,274, 0,261,1442, +,+,+, 152747 LTR ERVL 650 chr11 8614427 8614788 CR1-L3B_Croc 279 + 8614427 8614788 0 2 137,184, 0,177, +,+, 152773 LINE CR1 651 chr11 8697287 8698289 CR1-D2 650 - 8697287 8698289 0 2 62,627, 0,375, -,-, 152811 LINE CR1 651 chr11 8768419 8768522 (C)n 629 + 8768419 8768522 0 2 41,25, 0,78, +,+, 152850 Simple_repeat Simple_repeat 652 chr11 8893254 8894229 CR1-D2 609 - 8893254 8894229 0 2 222,622, 0,353, -,-, 152910 LINE CR1 653 chr11 8978467 8979225 CR1-L3B_Croc 304 + 8978467 8979225 0 2 89,254, 0,504, +,+, 152945 LINE CR1 654 chr11 9154492 9154545 (TTTG)n 436 + 9154492 9154545 0 2 21,6, 0,47, +,+, 153041 Simple_repeat Simple_repeat 655 chr11 9222904 9226728 CR1-G 479 + 9222904 9226728 0 2 164,143, 0,3681, +,+, 153068 LINE CR1 655 chr11 9223071 9226081 GGLTR11-int 723 - 9223071 9226081 0 3 493,2074,322, 0,614,2688, -,-,-, 153069 LTR ERV1 656 chr11 9331731 9331990 CR1-C4 693 + 9331731 9331990 0 2 68,191, 0,68, +,+, 153122 LINE CR1 658 chr11 9674047 9675379 CR1-Y2_Aves 177 + 9674047 9675379 0 3 470,214,301, 0,796,1031, +,+,+, 153301 LINE CR1 659 chr11 9732421 9734160 CR1-Y 494 - 9732421 9734160 0 2 1314,357, 0,1382, -,-, 153330 LINE CR1 662 chr11 10093272 10093979 CR1-Y4 591 - 10093272 10093979 0 2 55,619, 0,88, -,-, 153447 LINE CR1 662 chr11 10175064 10175698 Mariner1b_GG 312 - 10175064 10175698 0 2 119,128, 0,506, -,-, 153477 DNA TcMar-Mariner 666 chr11 10684761 10685807 CR1-D 444 + 10684761 10685807 0 2 485,480, 0,566, +,+, 153640 LINE CR1 666 chr11 10724496 10724552 (TTG)n 466 + 10724496 10724552 0 2 8,9, 0,47, +,+, 153652 Simple_repeat Simple_repeat 667 chr11 10757911 10758149 Char12Mar1_GG 712 - 10757911 10758149 0 2 100,135, 0,103, -,-, 153664 DNA hAT-Charlie 667 chr11 10766138 10766288 (AT)n 290 + 10766138 10766288 0 2 22,64, 0,86, +,+, 153669 Simple_repeat Simple_repeat 667 chr11 10853475 10854174 CR1-D2 727 - 10853475 10854174 0 2 445,251, 0,448, -,-, 153717 LINE CR1 668 chr11 10947341 10947374 (TTTATA)n 574 + 10947341 10947374 0 2 8,8, 0,25, +,+, 153747 Simple_repeat Simple_repeat 83 chr11 11009847 11010454 GGLTR11-int 310 - 11009847 11010454 0 2 278,69, 0,538, -,-, 153784 LTR ERV1 670 chr11 11199809 11200673 GGLTR5B 555 + 11199809 11200673 0 2 201,396, 0,468, +,+, 153850 LTR ERVL 670 chr11 11233654 11235031 CR1-Y2_Aves 325 - 11233654 11235031 0 2 558,313, 0,1064, -,-, 153862 LINE CR1 672 chr11 11526944 11527947 CR1-D 702 + 11526944 11527947 0 2 609,394, 0,609, +,+, 153962 LINE CR1 673 chr11 11569505 11569827 CR1-L3B_Croc 341 - 11569505 11569827 0 2 142,93, 0,229, -,-, 153980 LINE CR1 673 chr11 11611230 11611698 TguLTR5e 277 - 11611230 11611698 0 2 134,274, 0,194, -,-, 153998 LTR ERVL 674 chr11 11755669 11756213 CR1-F2 619 + 11755669 11756213 0 3 58,41,441, 0,58,103, +,+,+, 154050 LINE CR1 674 chr11 11783588 11783846 CR1-X2 599 + 11783588 11783846 0 2 141,100, 0,158, +,+, 154059 LINE CR1 677 chr11 12147910 12147967 (ATTTTT)n 498 + 12147910 12147967 0 2 7,8, 0,49, +,+, 154184 Simple_repeat Simple_repeat 679 chr11 12428331 12428437 A-rich 376 + 12428331 12428437 0 2 34,48, 0,58, +,+, 154325 Low_complexity Low_complexity 679 chr11 12451192 12451769 CR1-C3 654 - 12451192 12451769 0 2 433,144, 0,433, -,-, 154339 LINE CR1 680 chr11 12455789 12459937 Mariner1_GG 588 - 12455789 12459937 0 2 47,47, 0,4101, -,-, 154341 DNA TcMar-Mariner 681 chr11 12646667 12646785 GGLTR3A 920 - 12646667 12646785 0 2 56,62, 0,56, -,-, 154437 LTR ERVL 681 chr11 12682778 12683443 CR1-Y2_Aves 358 - 12682778 12683443 0 2 136,529, 0,136, -,-, 154462 LINE CR1 683 chr11 12878854 12879381 GGLTR8B 405 - 12878854 12879381 0 3 89,130,65, 0,274,462, -,-,-, 154571 LTR ERVL 684 chr11 12985208 12985302 (T)n 742 + 12985208 12985302 0 2 23,27, 0,67, +,+, 154623 Simple_repeat Simple_repeat 684 chr11 13056014 13062067 GGERVK1-int 962 - 13056014 13062067 0 4 241,447,5192,173, 0,241,688,5880, -,-,-,-, 154657 LTR ERVK 684 chr11 13097421 13098096 CR1-D2 632 - 13097421 13098096 0 2 582,93, 0,582, -,-, 154671 LINE CR1 686 chr11 13291347 13291747 GGLTR5B 418 + 13291347 13291747 0 2 257,87, 0,313, +,+, 154799 LTR ERVL 686 chr11 13343093 13343561 UCON8 164 - 13343093 13343561 0 2 235,213, 0,255, -,-, 154823 DNA DNA 687 chr11 13397153 13397413 CR1-Y4 561 + 13397153 13397413 0 2 129,131, 0,129, +,+, 154856 LINE CR1 687 chr11 13420851 13420900 (AAC)n 502 + 13420851 13420900 0 2 9,10, 0,39, +,+, 154873 Simple_repeat Simple_repeat 692 chr11 14098722 14099148 CR1-F2 654 - 14098722 14099148 0 2 161,240, 0,186, -,-, 155180 LINE CR1 695 chr11 14470842 14470980 CR1-E 764 + 14470842 14470980 0 2 58,80, 0,58, +,+, 155315 LINE CR1 697 chr11 14733605 14733732 (T)n 782 + 14733605 14733732 0 2 17,53, 0,74, +,+, 155424 Simple_repeat Simple_repeat 698 chr11 14895334 14895436 (CT)n 827 + 14895334 14895436 0 2 31,20, 0,82, +,+, 155540 Simple_repeat Simple_repeat 699 chr11 15037621 15037929 CR1-D2 799 - 15037621 15037929 0 2 275,33, 0,275, -,-, 155614 LINE CR1 700 chr11 15086901 15087039 (TCTCC)n 300 + 15086901 15087039 0 2 89,16, 0,122, +,+, 155630 Simple_repeat Simple_repeat 701 chr11 15285032 15285248 MIR_Aves1 502 - 15285032 15285248 0 2 74,97, 0,119, -,-, 155716 SINE MIR 706 chr11 15924468 15924953 CR1-Y2_Aves 221 + 15924468 15924953 0 2 235,134, 0,351, +,+, 155953 LINE CR1 706 chr11 15982730 15983118 CR1-F2 393 - 15982730 15983118 0 2 195,193, 0,195, -,-, 155973 LINE CR1 709 chr11 16307151 16307550 CR1-L3A_Croc 282 - 16307151 16307550 0 2 105,184, 0,215, -,-, 156101 LINE CR1 709 chr11 16360526 16361577 Mariner1_GG 630 - 16360526 16361577 0 2 81,967, 0,84, -,-, 156116 DNA TcMar-Mariner 716 chr11 17225956 17226117 CR1-F0 457 - 17225956 17226117 0 2 74,71, 0,90, -,-, 156421 LINE CR1 717 chr11 17423481 17429809 REP131 289 - 17423481 17429809 0 2 115,150, 0,6178, -,-, 156542 DNA? DNA? 719 chr11 17573369 17573606 CR1-D2 618 - 17573369 17573606 0 2 164,68, 0,169, -,-, 156636 LINE CR1 719 chr11 17598415 17601957 CR1-D2 638 + 17598415 17601957 0 2 514,39, 0,3503, +,+, 156674 LINE CR1 720 chr11 17726353 17726452 (TTCTC)n 262 + 17726353 17726452 0 2 13,47, 0,52, +,+, 156753 Simple_repeat Simple_repeat 720 chr11 17729953 17730140 CR1-H2 415 + 17729953 17730140 0 2 65,92, 0,95, +,+, 156756 LINE CR1 720 chr11 17778527 17778645 CR1-H2 435 - 17778527 17778645 0 2 59,59, 0,59, -,-, 156791 LINE CR1 721 chr11 17861279 17861573 (TGGA)n 721 + 17861279 17861573 0 2 179,83, 0,211, +,+, 156822 Simple_repeat Simple_repeat 723 chr11 18092650 18093873 CR1-L3A_Croc 108 - 18092650 18093873 0 2 152,745, 0,478, -,-, 156972 LINE CR1 726 chr11 18552616 18553085 CR1-D2 489 + 18552616 18553085 0 2 315,154, 0,315, +,+, 157194 LINE CR1 726 chr11 18603837 18604654 (TGGA)n 466 + 18603837 18604654 0 2 472,331, 0,486, +,+, 157246 Simple_repeat Simple_repeat 728 chr11 18769193 18769291 (T)n 871 + 18769193 18769291 0 2 32,33, 0,65, +,+, 157329 Simple_repeat Simple_repeat 728 chr11 18773792 18774169 CR1-C4 450 - 18773792 18774169 0 2 55,187, 0,190, -,-, 157333 LINE CR1 729 chr11 18939104 18939295 G-rich 398 + 18939104 18939295 0 2 54,84, 0,107, +,+, 157460 Low_complexity Low_complexity 730 chr11 19014339 19014537 CR1-H2 225 - 19014339 19014537 0 2 30,88, 0,110, -,-, 157508 LINE CR1 730 chr11 19057898 19058004 (GCC)n 398 + 19057898 19058004 0 2 24,35, 0,71, +,+, 157521 Simple_repeat Simple_repeat 731 chr11 19188271 19188672 CR1-D2 535 - 19188271 19188672 0 2 124,277, 0,124, -,-, 157599 LINE CR1 731 chr11 19205321 19206174 CR1-L3A_Croc 343 + 19205321 19206174 0 2 66,289, 0,564, +,+, 157605 LINE CR1 731 chr11 19250591 19250939 CR1-Y4 578 + 19250591 19250939 0 2 88,260, 0,88, +,+, 157617 LINE CR1 731 chr11 19254772 19262507 GGERV28_LTR 933 - 19254772 19262507 0 3 478,6780,477, 0,478,7258, -,-,-, 157621 LTR ERVK 732 chr11 19372247 19372481 Charlie12_GG 723 - 19372247 19372481 0 2 49,43, 0,191, -,-, 157672 DNA hAT-Charlie 737 chr11 19937679 19938983 GGERVL18-int 651 - 19937679 19938983 0 2 904,378, 0,926, -,-, 157922 LTR ERVL 737 chr11 20011188 20012020 CR1-F2 440 - 20011188 20012020 0 2 64,465, 0,367, -,-, 157954 LINE CR1 738 chr11 20112570 20113899 CR1-X2 339 + 20112570 20113899 0 2 1014,249, 0,1080, +,+, 157996 LINE CR1 738 chr11 20126004 20127188 CR1-D2 567 - 20126004 20127188 0 2 622,562, 0,622, -,-, 158006 LINE CR1 739 chr11 20204617 20206611 CR1-C 607 - 20204617 20206611 0 2 839,422, 0,1572, -,-, 158044 LINE CR1 739 chr11 20208940 20210652 CR1-G 559 - 20208940 20210652 0 3 386,154,599, 0,706,1113, -,-,-, 158052 LINE CR1 585 chr11_NT_461881v1_random 5399 6238 CR1-C3 494 + 5399 6238 0 2 694,145, 0,694, +,+, 158069 LINE CR1 585 chr11_NT_461881v1_random 18771 19612 CR1-C3 491 + 18771 19612 0 2 696,145, 0,696, +,+, 158078 LINE CR1 585 chr11_NT_461881v1_random 25450 26290 CR1-C3 493 + 25450 26290 0 2 695,145, 0,695, +,+, 158086 LINE CR1 585 chr11_NT_461881v1_random 32127 32967 CR1-C3 493 + 32127 32967 0 2 695,145, 0,695, +,+, 158094 LINE CR1 585 chr11_NT_461883v1_random 2068 2908 CR1-C3 493 + 2068 2908 0 2 695,145, 0,695, +,+, 158117 LINE CR1 585 chr11_NT_461883v1_random 8744 9584 CR1-C3 493 + 8744 9584 0 2 695,145, 0,695, +,+, 158125 LINE CR1 585 chr11_NT_461883v1_random 15417 16256 CR1-C3 494 + 15417 16256 0 2 694,145, 0,694, +,+, 158132 LINE CR1 585 chr11_NT_461885v1_random 3392 4469 Sat-CR1_GG 240 + 3392 4469 0 3 19,435,208, 0,266,869, +,+,+, 158150 Satellite Satellite 585 chr11_NT_461885v1_random 6682 7492 Sat-CR1_GG 204 + 6682 7492 0 2 434,208, 0,602, +,+, 158156 Satellite Satellite 585 chr11_NT_461885v1_random 9783 10594 Sat-CR1_GG 204 + 9783 10594 0 2 435,208, 0,603, +,+, 158162 Satellite Satellite 585 chr11_NT_461885v1_random 12883 13694 Sat-CR1_GG 204 + 12883 13694 0 2 435,208, 0,603, +,+, 158168 Satellite Satellite 585 chr11_NT_461885v1_random 15985 16796 Sat-CR1_GG 204 + 15985 16796 0 2 435,208, 0,603, +,+, 158174 Satellite Satellite 585 chr11_NT_461885v1_random 19086 19897 Sat-CR1_GG 242 + 19086 19897 0 2 435,208, 0,603, +,+, 158180 Satellite Satellite 585 chr11_NT_461886v1_random 12242 12819 CR1-C3 654 + 12242 12819 0 2 148,429, 0,148, +,+, 158193 LINE CR1 585 chr11_NT_461887v1_random 501 2546 Sat-CR1_GG 234 + 501 2546 0 2 99,321, 0,1724, +,+, 158200 Satellite Satellite 585 chr11_NT_461887v1_random 6742 7208 Sat-CR1_GG 254 + 6742 7208 0 2 19,119, 0,347, +,+, 158210 Satellite Satellite 585 chr11_NT_461887v1_random 9002 9468 Sat-CR1_GG 254 + 9002 9468 0 2 19,119, 0,347, +,+, 158214 Satellite Satellite 585 chr11_NT_461887v1_random 11262 11728 Sat-CR1_GG 254 + 11262 11728 0 2 19,119, 0,347, +,+, 158218 Satellite Satellite 585 chr11_NT_461887v1_random 13522 13988 Sat-CR1_GG 254 + 13522 13988 0 2 19,119, 0,347, +,+, 158222 Satellite Satellite 585 chr11_NT_461887v1_random 15782 16247 Sat-CR1_GG 254 + 15782 16247 0 2 19,119, 0,346, +,+, 158226 Satellite Satellite 585 chr11_NT_461888v1_random 4636 5470 CR1-C3 466 - 4636 5470 0 2 147,687, 0,147, -,-, 158241 LINE CR1 585 chr11_NT_461888v1_random 11292 12131 CR1-C3 494 - 11292 12131 0 2 152,687, 0,152, -,-, 158249 LINE CR1 585 chr11_NT_461892v1_random 5815 7005 CR1-D2 578 - 5815 7005 0 2 1117,73, 0,1117, -,-, 158284 LINE CR1 585 chr11_NT_461893v1_random 2641 3450 Sat-CR1_GG 196 - 2641 3450 0 2 208,433, 0,376, -,-, 158297 Satellite Satellite 585 chr11_NT_461893v1_random 5679 6490 Sat-CR1_GG 240 - 5679 6490 0 2 208,435, 0,376, -,-, 158303 Satellite Satellite 585 chr11_NT_461893v1_random 8776 9585 Sat-CR1_GG 216 - 8776 9585 0 2 207,434, 0,375, -,-, 158309 Satellite Satellite 585 chr11_NT_461893v1_random 11873 12684 Sat-CR1_GG 240 - 11873 12684 0 2 208,435, 0,376, -,-, 158315 Satellite Satellite 585 chr11_NT_461893v1_random 14964 15700 Sat-CR1_GG 178 - 14964 15700 0 2 208,361, 0,375, -,-, 158320 Satellite Satellite 585 chr11_NT_461894v1_random 3979 5150 Sat-CR1_GG 222 - 3979 5150 0 2 36,853, 0,318, -,-, 158329 Satellite Satellite 585 chr11_NT_461894v1_random 15141 16082 Sat-CR1_GG 236 - 15141 16082 0 2 40,694, 0,247, -,-, 158349 Satellite Satellite 585 chr11_NT_461895v1_random 5774 6239 Sat-CR1_GG 276 - 5774 6239 0 2 119,19, 0,446, -,-, 158364 Satellite Satellite 585 chr11_NT_461895v1_random 8102 8469 Sat-CR1_GG 244 - 8102 8469 0 2 22,19, 0,348, -,-, 158368 Satellite Satellite 585 chr11_NT_461895v1_random 10258 10724 Sat-CR1_GG 274 - 10258 10724 0 2 119,19, 0,447, -,-, 158372 Satellite Satellite 585 chr11_NT_461895v1_random 14750 15213 Sat-CR1_GG 172 - 14750 15213 0 2 119,18, 0,445, -,-, 158383 Satellite Satellite 585 chr11_NT_461896v1_random 9423 10233 CR1-C3 295 - 9423 10233 0 2 136,674, 0,136, -,-, 158393 LINE CR1 585 chr11_NT_461896v1_random 10156 11264 CR1-H 595 + 10156 11264 0 2 338,627, 0,481, +,+, 158394 LINE CR1 585 chr11_NT_461900v1_random 632 1507 Sat-CR1_GG 214 + 632 1507 0 2 244,425, 0,450, +,+, 158411 Satellite Satellite 585 chr11_NT_461900v1_random 2532 3331 Sat-CR1_GG 212 + 2532 3331 0 2 603,183, 0,616, +,+, 158415 Satellite Satellite 585 chr11_NT_461900v1_random 11422 12300 Sat-CR1_GG 202 + 11422 12300 0 2 282,432, 0,446, +,+, 158432 Satellite Satellite 585 chr11_NT_461901v1_random 7234 8365 CR1-F2 377 - 7234 8365 0 2 321,90, 0,1041, -,-, 158440 LINE CR1 585 chr11_NT_461907v1_random 8133 8597 Sat-CR1_GG 276 - 8133 8597 0 2 119,19, 0,445, -,-, 158495 Satellite Satellite 585 chr11_NT_461921v1_random 4173 5178 CR1-D 690 - 4173 5178 0 2 398,607, 0,398, -,-, 158577 LINE CR1 585 chr11_NT_461948v1_random 6328 7372 CR1-C2 676 - 6328 7372 0 2 973,71, 0,973, -,-, 158678 LINE CR1 585 chr11_NT_461950v1_random 1133 2189 CR1-C 483 + 1133 2189 0 2 834,113, 0,943, +,+, 158684 LINE CR1 585 chr11_NT_461964v1_random 1690 6179 GGXHOI 400 - 1690 6179 0 7 1925,140,260,132,351,1175,314, 0,1976,2134,2437,2586,2956,4175, -,-,-,-,-,-,-, 158725 Satellite W-chromosome 585 chr11_NT_461984v1_random 429 946 Sat-CR1_GG 198 - 429 946 0 2 129,191, 0,326, -,-, 158781 Satellite Satellite 585 chr11_NT_461984v1_random 3370 4173 Sat-CR1_GG 238 - 3370 4173 0 2 208,468, 0,335, -,-, 158789 Satellite Satellite 585 chr12 18735 19036 G-rich 470 + 18735 19036 0 2 76,196, 0,105, +,+, 158915 Low_complexity Low_complexity 585 chr12 22299 24480 CR1-H 720 + 22299 24480 0 2 549,1292, 0,889, +,+, 158918 LINE CR1 585 chr12 47418 48118 Sat-CR1_GG 210 + 47418 48118 0 2 140,409, 0,291, +,+, 158939 Satellite Satellite 585 chr12 48174 48604 GGXHOI 366 + 48174 48604 0 2 238,19, 0,411, +,+, 158942 Satellite W-chromosome 585 chr12 54524 61543 GGLTR7A 839 - 54524 61543 0 4 610,171,5629,609, 0,610,781,6410, -,-,-,-, 158947 LTR ERV1 585 chr12 62235 63130 GGERVL-A-int 410 + 62235 63130 0 2 834,58, 0,837, +,+, 158948 LTR ERVL 585 chr12 64597 71298 GGLTR7-int 771 - 64597 71298 0 5 581,2305,1088,2077,495, 0,581,2953,4129,6206, -,-,-,-,-, 158951 LTR ERV1 585 chr12 116642 118405 CR1-H 789 - 116642 118405 0 2 1052,349, 0,1414, -,-, 158965 LINE CR1 585 chr12 117694 118056 GGLTR3A 893 - 117694 118056 0 2 317,45, 0,317, -,-, 158966 LTR ERVL 585 chr12 122097 123901 CR1-F2 498 - 122097 123901 0 2 252,1392, 0,412, -,-, 158969 LINE CR1 586 chr12 138383 139444 Charlie12_GGa 656 - 138383 139444 0 2 645,93, 0,968, -,-, 158984 DNA hAT-Charlie 586 chr12 141011 142294 CR1-G 815 - 141011 142294 0 2 445,324, 0,959, -,-, 158991 LINE CR1 586 chr12 150880 162604 GGERVL18-int 522 - 150880 162604 0 4 326,4908,171,1366, 0,326,9851,10358, -,-,-,-, 158996 LTR ERVL 586 chr12 193583 194100 CR1-D 615 + 193583 194100 0 2 463,54, 0,463, +,+, 159014 LINE CR1 586 chr12 212676 213591 CR1-F2 537 + 212676 213591 0 2 601,314, 0,601, +,+, 159027 LINE CR1 586 chr12 220577 222401 GGERV20_I-int 122 + 220577 222401 0 2 190,1377, 0,447, +,+, 159032 LTR ERVL 586 chr12 222401 223034 GGERV20_I-int 547 - 222401 223034 0 2 314,319, 0,314, -,-, 159033 LTR ERVL 586 chr12 237095 238916 CR1-F 486 + 237095 238916 0 2 432,1080, 0,741, +,+, 159046 LINE CR1 586 chr12 249463 251775 CR1-F2 427 - 249463 251775 0 4 596,319,586,132, 0,599,964,2180, -,-,-,-, 159054 LINE CR1 587 chr12 267819 268621 GGLTR5B 421 - 267819 268621 0 2 194,414, 0,388, -,-, 159070 LTR ERVL 587 chr12 288532 288900 CR1-D 557 - 288532 288900 0 2 73,295, 0,73, -,-, 159082 LINE CR1 587 chr12 332877 336584 CR1-Y 778 + 332877 336584 0 2 1563,228, 0,3479, +,+, 159109 LINE CR1 587 chr12 346122 348005 CR1-X2 685 - 346122 348005 0 2 75,621, 0,1262, -,-, 159116 LINE CR1 587 chr12 349252 349699 GGLTR5B 451 - 349252 349699 0 2 174,187, 0,260, -,-, 159118 LTR ERVL 587 chr12 359281 361097 CR1-H 776 - 359281 361097 0 3 77,860,572, 0,365,1244, -,-,-, 159124 LINE CR1 587 chr12 384695 385584 GGLTR5B 392 + 384695 385584 0 2 65,108, 0,781, +,+, 159143 LTR ERVL 587 chr12 384867 385447 Char12Mar1_GG 388 - 384867 385447 0 2 34,38, 0,542, -,-, 159145 DNA hAT-Charlie 588 chr12 420676 421983 CR1-F2 592 - 420676 421983 0 2 519,788, 0,519, -,-, 159164 LINE CR1 588 chr12 433401 434954 CR1-C3 638 - 433401 434954 0 2 1127,84, 0,1469, -,-, 159169 LINE CR1 588 chr12 434528 434870 GGERV10_LTR 587 - 434528 434870 0 2 160,93, 0,249, -,-, 159170 LTR ERVL 588 chr12 438657 438825 CR1-C3 759 - 438657 438825 0 2 90,78, 0,90, -,-, 159172 LINE CR1 588 chr12 445344 446318 CR1-D2 582 - 445344 446318 0 3 613,35,326, 0,613,648, -,-,-, 159176 LINE CR1 588 chr12 464237 464506 TguLTR5d 336 - 464237 464506 0 2 76,102, 0,167, -,-, 159185 LTR ERVL 589 chr12 542899 542965 A-rich 298 + 542899 542965 0 2 14,14, 0,52, +,+, 159226 Low_complexity Low_complexity 589 chr12 603108 605234 CR1-G 816 + 603108 605234 0 2 904,1222, 0,904, +,+, 159262 LINE CR1 590 chr12 696634 697508 CR1-X2 483 + 696634 697508 0 2 742,132, 0,742, +,+, 159292 LINE CR1 590 chr12 702472 703294 CR1-D2 638 + 702472 703294 0 2 614,182, 0,640, +,+, 159295 LINE CR1 590 chr12 738101 738778 TguLTR5e 318 + 738101 738778 0 2 254,283, 0,394, +,+, 159330 LTR ERVL 591 chr12 800756 800802 (CA)n 680 + 800756 800802 0 2 7,6, 0,40, +,+, 159368 Simple_repeat Simple_repeat 591 chr12 813083 813641 CR1-D 543 - 813083 813641 0 2 433,125, 0,433, -,-, 159376 LINE CR1 591 chr12 843627 844889 CR1-H 815 + 843627 844889 0 2 637,625, 0,637, +,+, 159387 LINE CR1 591 chr12 863544 864202 CR1-D2 629 + 863544 864202 0 2 328,330, 0,328, +,+, 159395 LINE CR1 593 chr12 1054615 1055000 GGLTR8A 362 + 1054615 1055000 0 2 84,185, 0,200, +,+, 159473 LTR ERVL 593 chr12 1087136 1087665 GGLTR3F1 930 - 1087136 1087665 0 2 493,36, 0,493, -,-, 159497 LTR ERVL 593 chr12 1087665 1094319 GGERVL-B-int 916 - 1087665 1094319 0 3 5315,493,845, 0,5316,5809, -,-,-, 159498 LTR ERVL 593 chr12 1113452 1113860 (TTAGGG)n 545 + 1113452 1113860 0 2 203,179, 0,229, +,+, 159512 Simple_repeat Simple_repeat 593 chr12 1113873 1115759 GGERVL-B-int 734 - 1113873 1115759 0 4 247,527,390,195, 0,247,1301,1691, -,-,-,-, 159513 LTR ERVL 593 chr12 1117753 1118314 GGLTR7A 762 + 1117753 1118314 0 2 340,219, 0,342, +,+, 159515 LTR ERV1 593 chr12 1134045 1140952 GGLTR7-int 821 + 1134045 1140952 0 5 609,2577,2582,920,219, 0,609,3186,5768,6688, +,+,+,+,+, 159526 LTR ERV1 594 chr12 1185571 1186805 CR1-C4 571 + 1185571 1186805 0 3 95,808,144, 0,282,1090, +,+,+, 159550 LINE CR1 594 chr12 1200493 1203939 GGERVL-C-int 709 + 1200493 1203939 0 3 552,1259,1635, 0,552,1811, +,+,+, 159558 LTR ERVL 594 chr12 1206306 1206955 GGLTR7-int 777 + 1206306 1206955 0 3 223,284,141, 0,223,508, +,+,+, 159560 LTR ERV1 594 chr12 1247503 1249856 CR1-F 433 - 1247503 1249856 0 4 344,129,339,207, 0,344,1807,2146, -,-,-,-, 159583 LINE CR1 594 chr12 1264266 1265471 CR1-F 473 - 1264266 1265471 0 2 158,1047, 0,158, -,-, 159593 LINE CR1 594 chr12 1302162 1302869 GGLTR8B 486 - 1302162 1302869 0 2 576,131, 0,576, -,-, 159617 LTR ERVL 594 chr12 1307762 1308442 CR1-C3 649 - 1307762 1308442 0 2 513,167, 0,513, -,-, 159620 LINE CR1 595 chr12 1317826 1318074 CR1-Y2 811 - 1317826 1318074 0 2 113,135, 0,113, -,-, 159629 LINE CR1 595 chr12 1373405 1373872 Char12Mar1_GG 684 - 1373405 1373872 0 2 34,302, 0,165, -,-, 159650 DNA hAT-Charlie 595 chr12 1388063 1388523 CR1-D2 500 + 1388063 1388523 0 2 222,181, 0,279, +,+, 159656 LINE CR1 597 chr12 1625662 1625961 GGLTR5B 644 - 1625662 1625961 0 2 152,147, 0,152, -,-, 159817 LTR ERVL 597 chr12 1636643 1636927 UCON4 369 - 1636643 1636927 0 2 137,100, 0,184, -,-, 159824 Unknown Unknown 598 chr12 1782349 1782798 CR1-Y2_Aves 311 - 1782349 1782798 0 2 302,142, 0,307, -,-, 159884 LINE CR1 599 chr12 1938659 1939609 CR1-11_Crp 112 - 1938659 1939609 0 2 142,308, 0,642, -,-, 159947 LINE CR1 599 chr12 1947200 1948073 Char12Mar1_GG 526 - 1947200 1948073 0 2 486,51, 0,822, -,-, 159952 DNA hAT-Charlie 599 chr12 1956540 1957147 CR1-11_Crp 137 - 1956540 1957147 0 2 305,140, 0,467, -,-, 159959 LINE CR1 600 chr12 1988197 1988875 CR1-F 901 - 1988197 1988875 0 2 100,572, 0,106, -,-, 159975 LINE CR1 600 chr12 2025598 2026257 CR1-Y2_Aves 117 - 2025598 2026257 0 2 181,478, 0,181, -,-, 159994 LINE CR1 601 chr12 2143562 2144433 CR1-G 297 + 2143562 2144433 0 2 208,590, 0,281, +,+, 160053 LINE CR1 601 chr12 2174498 2175074 L2-1_AMi 339 - 2174498 2175074 0 2 173,69, 0,507, -,-, 160061 LINE L2 602 chr12 2247503 2248722 CR1-F2 485 - 2247503 2248722 0 3 91,74,545, 0,111,674, -,-,-, 160095 LINE CR1 602 chr12 2277685 2278064 Char12Mar1_GG 554 - 2277685 2278064 0 2 270,109, 0,270, -,-, 160113 DNA hAT-Charlie 602 chr12 2285369 2285748 Char12Mar1_GG 554 - 2285369 2285748 0 2 270,109, 0,270, -,-, 160119 DNA hAT-Charlie 602 chr12 2287757 2289301 CR1-F 531 + 2287757 2289301 0 2 930,292, 0,1252, +,+, 160122 LINE CR1 602 chr12 2290706 2292604 CR1-F2 670 + 2290706 2292604 0 2 63,166, 0,1732, +,+, 160126 LINE CR1 602 chr12 2310248 2311277 CR1-C 790 - 2310248 2311277 0 2 958,71, 0,958, -,-, 160144 LINE CR1 602 chr12 2315863 2316280 GGLTR3B1 648 - 2315863 2316280 0 2 316,83, 0,334, -,-, 160149 LTR ERVL 604 chr12 2504704 2505578 CR1-L3B_Croc 201 + 2504704 2505578 0 2 207,229, 0,645, +,+, 160244 LINE CR1 604 chr12 2555482 2555947 CR1-C4 483 + 2555482 2555947 0 2 365,100, 0,365, +,+, 160279 LINE CR1 606 chr12 2815894 2817863 CR1-F2 442 - 2815894 2817863 0 2 429,202, 0,1767, -,-, 160400 LINE CR1 606 chr12 2848177 2849779 CR1-F2 291 - 2848177 2849779 0 2 146,570, 0,1032, -,-, 160414 LINE CR1 606 chr12 2853961 2855342 CR1-F0 412 - 2853961 2855342 0 2 147,331, 0,1050, -,-, 160416 LINE CR1 606 chr12 2862670 2864284 CR1-F2 288 + 2862670 2864284 0 2 564,147, 0,1467, +,+, 160420 LINE CR1 607 chr12 2978023 2978112 (GCCGG)n 412 + 2978023 2978112 0 2 36,21, 0,68, +,+, 160469 Simple_repeat Simple_repeat 607 chr12 2980290 2980882 CR1-Y2_Aves 133 - 2980290 2980882 0 3 16,90,357, 0,122,235, -,-,-, 160474 LINE CR1 607 chr12 2995331 2995890 (CATGC)n 509 + 2995331 2995890 0 3 177,115,21, 0,177,538, +,+,+, 160481 Simple_repeat Simple_repeat 608 chr12 3095161 3100117 CR1-C4 477 - 3095161 3100117 0 3 119,555,203, 0,4198,4753, -,-,-, 160530 LINE CR1 609 chr12 3259073 3260686 CR1-F2 315 - 3259073 3260686 0 2 147,563, 0,1050, -,-, 160656 LINE CR1 609 chr12 3265760 3267373 CR1-F2 293 - 3265760 3267373 0 2 147,563, 0,1050, -,-, 160660 LINE CR1 609 chr12 3272456 3274069 CR1-F2 293 - 3272456 3274069 0 2 147,563, 0,1050, -,-, 160664 LINE CR1 611 chr12 3469834 3470157 CR1-C2 732 - 3469834 3470157 0 2 119,204, 0,119, -,-, 160728 LINE CR1 612 chr12 3604983 3605287 CR1-C3 396 - 3604983 3605287 0 2 132,144, 0,160, -,-, 160771 LINE CR1 612 chr12 3622919 3624586 CR1-C4 611 - 3622919 3624586 0 3 474,877,316, 0,474,1351, -,-,-, 160783 LINE CR1 613 chr12 3742220 3743341 CR1-C3 649 - 3742220 3743341 0 2 523,598, 0,523, -,-, 160817 LINE CR1 614 chr12 3893483 3894975 CR1-D2 542 - 3893483 3894975 0 2 203,1284, 0,208, -,-, 160870 LINE CR1 615 chr12 4033711 4034793 CR1-L3A_Croc 235 - 4033711 4034793 0 2 143,230, 0,852, -,-, 160941 LINE CR1 615 chr12 4057752 4058948 CR1-D2 528 - 4057752 4058948 0 2 1080,116, 0,1080, -,-, 160955 LINE CR1 615 chr12 4062322 4062722 REP131 386 - 4062322 4062722 0 2 63,77, 0,323, -,-, 160957 DNA? DNA? 618 chr12 4340545 4341510 CR1-D 748 + 4340545 4341510 0 2 645,320, 0,645, +,+, 161115 LINE CR1 618 chr12 4346019 4346985 CR1-D 749 - 4346019 4346985 0 2 337,629, 0,337, -,-, 161120 LINE CR1 618 chr12 4365035 4366101 CR1-C4 672 + 4365035 4366101 0 2 691,204, 0,862, +,+, 161135 LINE CR1 619 chr12 4522183 4522494 Char12Mar1_GG 690 - 4522183 4522494 0 2 131,180, 0,131, -,-, 161192 DNA hAT-Charlie 619 chr12 4572746 4572950 Char12Mar1_GG 709 - 4572746 4572950 0 2 72,126, 0,78, -,-, 161222 DNA hAT-Charlie 620 chr12 4621800 4622470 CR1-D2 728 + 4621800 4622470 0 2 560,86, 0,584, +,+, 161237 LINE CR1 620 chr12 4646826 4647889 CR1-C3 636 + 4646826 4647889 0 3 555,272,236, 0,555,827, +,+,+, 161244 LINE CR1 623 chr12 5032819 5033226 REP131 220 - 5032819 5033226 0 2 227,140, 0,267, -,-, 161408 DNA? DNA? 623 chr12 5056609 5056881 CR1-Y2_Aves 295 - 5056609 5056881 0 2 105,167, 0,105, -,-, 161415 LINE CR1 624 chr12 5228265 5228767 (CA)n 774 + 5228265 5228767 0 2 188,136, 0,366, +,+, 161483 Simple_repeat Simple_repeat 624 chr12 5228683 5229101 (CATA)n 614 + 5228683 5229101 0 2 182,58, 0,360, +,+, 161485 Simple_repeat Simple_repeat 625 chr12 5247329 5247725 CR1-D2 416 - 5247329 5247725 0 2 297,95, 0,301, -,-, 161491 LINE CR1 625 chr12 5366125 5367018 CR1-L3A_Croc 259 - 5366125 5367018 0 2 216,67, 0,826, -,-, 161527 LINE CR1 626 chr12 5374524 5374938 CR1-Y4 567 - 5374524 5374938 0 2 304,109, 0,305, -,-, 161530 LINE CR1 627 chr12 5527731 5527891 CR1-X 453 + 5527731 5527891 0 2 43,75, 0,85, +,+, 161578 LINE CR1 629 chr12 5860884 5861380 CR1-C4 643 - 5860884 5861380 0 2 255,241, 0,255, -,-, 161690 LINE CR1 638 chr12 6957312 6957416 A-rich 488 + 6957312 6957416 0 2 32,59, 0,45, +,+, 162122 Low_complexity Low_complexity 638 chr12 7039652 7040065 CR1-L3A_Croc 308 - 7039652 7040065 0 2 285,106, 0,307, -,-, 162145 LINE CR1 638 chr12 7069973 7070710 ENS1B-LTR 434 - 7069973 7070710 0 2 374,339, 0,398, -,-, 162163 LTR ERVL 639 chr12 7098033 7098153 Char12Mar1_GG 642 - 7098033 7098153 0 2 78,39, 0,81, -,-, 162183 DNA hAT-Charlie 639 chr12 7150679 7151084 GGLTR5A 398 - 7150679 7151084 0 2 98,307, 0,98, -,-, 162202 LTR ERVL 639 chr12 7155226 7155300 (TTTT)n 314 + 7155226 7155300 0 2 17,7, 0,67, +,+, 162205 Simple_repeat Simple_repeat 639 chr12 7159505 7160282 CR1-X2 321 - 7159505 7160282 0 2 612,165, 0,612, -,-, 162208 LINE CR1 639 chr12 7196790 7196853 (TTTTGTT)n 322 + 7196790 7196853 0 2 7,18, 0,45, +,+, 162222 Simple_repeat Simple_repeat 640 chr12 7276338 7276902 UCON28a 306 + 7276338 7276902 0 2 149,289, 0,275, +,+, 162248 Unknown Unknown 640 chr12 7281700 7281743 (GAGTGA)n 514 + 7281700 7281743 0 2 14,7, 0,36, +,+, 162252 Simple_repeat Simple_repeat 640 chr12 7281799 7283083 CR1-C 775 + 7281799 7283083 0 2 669,615, 0,669, +,+, 162254 LINE CR1 640 chr12 7314939 7316206 GGLTR11-int 412 + 7314939 7316206 0 2 389,349, 0,918, +,+, 162271 LTR ERV1 642 chr12 7550772 7551181 Char12Mar1_GG 570 - 7550772 7551181 0 2 288,121, 0,288, -,-, 162389 DNA hAT-Charlie 642 chr12 7578254 7579189 CR1-C4 437 - 7578254 7579189 0 2 448,464, 0,471, -,-, 162404 LINE CR1 642 chr12 7581813 7582101 CR1-Y2_Aves 247 - 7581813 7582101 0 2 204,84, 0,204, -,-, 162405 LINE CR1 643 chr12 7631770 7632218 CR1-C4 547 - 7631770 7632218 0 2 282,165, 0,283, -,-, 162418 LINE CR1 643 chr12 7666200 7666282 (TATA)n 330 + 7666200 7666282 0 2 9,41, 0,41, +,+, 162442 Simple_repeat Simple_repeat 643 chr12 7669994 7670128 (T)n 841 + 7669994 7670128 0 2 23,70, 0,64, +,+, 162448 Simple_repeat Simple_repeat 644 chr12 7807394 7807786 Char12Mar1_GG 481 - 7807394 7807786 0 2 128,264, 0,128, -,-, 162522 DNA hAT-Charlie 644 chr12 7853544 7855086 GGERV20_I-int 589 + 7853544 7855086 0 4 266,103,193,146, 0,266,370,1396, +,+,+,+, 162545 LTR ERVL 646 chr12 7997255 7997612 REP131 238 - 7997255 7997612 0 2 114,135, 0,222, -,-, 162622 DNA? DNA? 647 chr12 8142364 8143457 CR1-F2 383 + 8142364 8143457 0 2 626,392, 0,701, +,+, 162691 LINE CR1 650 chr12 8624186 8624547 GGERVL18-LTR 528 - 8624186 8624547 0 2 94,237, 0,124, -,-, 162894 LTR ERVL 650 chr12 8628292 8628348 A-rich 544 + 8628292 8628348 0 2 12,14, 0,42, +,+, 162896 Low_complexity Low_complexity 651 chr12 8702815 8703113 CR1-X2 479 + 8702815 8703113 0 2 77,217, 0,81, +,+, 162943 LINE CR1 653 chr12 8938746 8939594 CR1-F2 609 - 8938746 8939594 0 2 678,169, 0,679, -,-, 163012 LINE CR1 653 chr12 8940064 8940873 CR1-C4 799 + 8940064 8940873 0 2 777,32, 0,777, +,+, 163013 LINE CR1 655 chr12 9201262 9201347 (G)n 768 + 9201262 9201347 0 2 24,23, 0,62, +,+, 163125 Simple_repeat Simple_repeat 655 chr12 9254069 9254149 (CCTCT)n 332 + 9254069 9254149 0 2 9,9, 0,71, +,+, 163163 Simple_repeat Simple_repeat 655 chr12 9304629 9305102 CR1-L3A_Croc 521 - 9304629 9305102 0 2 398,57, 0,416, -,-, 163201 LINE CR1 656 chr12 9331369 9331741 REP131 284 - 9331369 9331741 0 2 117,80, 0,292, -,-, 163212 DNA? DNA? 658 chr12 9598500 9598834 CR1-D2 612 + 9598500 9598834 0 2 70,196, 0,138, +,+, 163331 LINE CR1 660 chr12 9943090 9944797 CR1-L3B_Croc 351 + 9943090 9944797 0 3 76,754,489, 0,198,1218, +,+,+, 163465 LINE CR1 660 chr12 9948455 9949972 CR1-D2 548 + 9948455 9949972 0 2 1128,105, 0,1412, +,+, 163467 LINE CR1 660 chr12 9952807 9954584 CR1-C4 433 + 9952807 9954584 0 2 86,365, 0,1412, +,+, 163469 LINE CR1 662 chr12 10152569 10153158 CR1-D2 631 + 10152569 10153158 0 2 88,165, 0,424, +,+, 163606 LINE CR1 662 chr12 10162770 10165695 CR1-F2 526 - 10162770 10165695 0 2 160,87, 0,2838, -,-, 163613 LINE CR1 662 chr12 10173873 10174400 REP131 295 - 10173873 10174400 0 2 186,167, 0,360, -,-, 163621 DNA? DNA? 662 chr12 10197920 10198160 GGLTR4B 756 - 10197920 10198160 0 2 120,85, 0,155, -,-, 163637 LTR ERVL 665 chr12 10549671 10549736 A-rich 384 + 10549671 10549736 0 2 23,19, 0,46, +,+, 163832 Low_complexity Low_complexity 666 chr12 10644166 10644263 A-rich 559 + 10644166 10644263 0 2 40,36, 0,61, +,+, 163877 Low_complexity Low_complexity 667 chr12 10835109 10835349 CR1-Y4 563 - 10835109 10835349 0 2 75,165, 0,75, -,-, 163959 LINE CR1 669 chr12 11091641 11093741 CR1-F2 322 + 11091641 11093741 0 2 327,223, 0,1877, +,+, 164057 LINE CR1 670 chr12 11183678 11183926 CR1-D2 672 - 11183678 11183926 0 2 151,97, 0,151, -,-, 164099 LINE CR1 673 chr12 11654837 11655576 CR1-C4 541 - 11654837 11655576 0 2 107,305, 0,434, -,-, 164309 LINE CR1 674 chr12 11738930 11739628 CR1-Y2_Aves 442 - 11738930 11739628 0 2 178,497, 0,201, -,-, 164342 LINE CR1 674 chr12 11762708 11762760 (TATGTA)n 262 + 11762708 11762760 0 2 22,9, 0,43, +,+, 164349 Simple_repeat Simple_repeat 676 chr12 11961479 11961649 CR1-Y4 0 + 11961479 11961649 0 2 35,66, 0,104, +,+, 164411 LINE CR1 676 chr12 11978462 11978547 (TTTTCT)n 366 + 11978462 11978547 0 2 42,11, 0,74, +,+, 164417 Simple_repeat Simple_repeat 676 chr12 11980171 11980833 CR1-11_Crp 381 + 11980171 11980833 0 3 68,104,234, 0,309,428, +,+,+, 164419 LINE CR1 676 chr12 12050025 12050080 (TACATA)n 528 + 12050025 12050080 0 2 11,8, 0,47, +,+, 164444 Simple_repeat Simple_repeat 680 chr12 12518398 12518459 (TCCTTT)n 444 + 12518398 12518459 0 2 11,12, 0,49, +,+, 164656 Simple_repeat Simple_repeat 680 chr12 12558579 12559001 GGLTR5B 703 - 12558579 12559001 0 2 147,272, 0,150, -,-, 164670 LTR ERVL 681 chr12 12675011 12675671 CR1-Y3 693 - 12675011 12675671 0 2 255,391, 0,269, -,-, 164723 LINE CR1 682 chr12 12758687 12759131 CR1-L3B_Croc 222 - 12758687 12759131 0 2 247,172, 0,272, -,-, 164761 LINE CR1 683 chr12 12853824 12853954 (AT)n 722 + 12853824 12853954 0 2 42,44, 0,86, +,+, 164790 Simple_repeat Simple_repeat 685 chr12 13221766 13221855 (A)n 854 + 13221766 13221855 0 2 20,23, 0,66, +,+, 164949 Simple_repeat Simple_repeat 687 chr12 13382122 13383242 CR1-D2 792 + 13382122 13383242 0 2 213,83, 0,1037, +,+, 165010 LINE CR1 687 chr12 13443346 13444624 CR1-F2 532 + 13443346 13444624 0 2 166,85, 0,1193, +,+, 165034 LINE CR1 688 chr12 13538879 13539017 CR1-F2 509 - 13538879 13539017 0 2 90,48, 0,90, -,-, 165078 LINE CR1 689 chr12 13663240 13665660 CR1-D2 496 + 13663240 13665660 0 2 139,308, 0,2112, +,+, 165144 LINE CR1 691 chr12 13922998 13923391 CR1-L3B_Croc 332 + 13922998 13923391 0 2 69,148, 0,245, +,+, 165249 LINE CR1 696 chr12 14551767 14551884 (GCAGCC)n 472 + 14551767 14551884 0 2 73,16, 0,101, +,+, 165464 Simple_repeat Simple_repeat 698 chr12 14833002 14833328 CR1-B 946 - 14833002 14833328 0 2 184,142, 0,184, -,-, 165568 LINE CR1 700 chr12 15144891 15145378 CR1-G 769 - 15144891 15145378 0 2 259,181, 0,306, -,-, 165676 LINE CR1 701 chr12 15224185 15224567 CR1-L3B_Croc 479 - 15224185 15224567 0 2 58,126, 0,256, -,-, 165707 LINE CR1 702 chr12 15386872 15387326 CR1-C4 553 - 15386872 15387326 0 2 138,316, 0,138, -,-, 165759 LINE CR1 706 chr12 15973932 15974035 (A)n 782 + 15973932 15974035 0 2 22,45, 0,58, +,+, 165988 Simple_repeat Simple_repeat 712 chr12 16661124 16661435 CR1-D2 639 - 16661124 16661435 0 2 201,110, 0,201, -,-, 166281 LINE CR1 712 chr12 16712477 16713247 OldhAT1 194 - 16712477 16713247 0 2 278,227, 0,543, -,-, 166296 DNA hAT-Ac 713 chr12 16797591 16797648 (TTTGTT)n 504 + 16797591 16797648 0 2 7,20, 0,37, +,+, 166320 Simple_repeat Simple_repeat 713 chr12 16837924 16838528 CR1-Y4 443 - 16837924 16838528 0 2 394,210, 0,394, -,-, 166329 LINE CR1 716 chr12 17259952 17260815 CR1-Y2_Aves 164 - 17259952 17260815 0 2 609,134, 0,729, -,-, 166479 LINE CR1 717 chr12 17341236 17344562 CR1-X2 501 + 17341236 17344562 0 2 14,54, 0,3272, +,+, 166496 LINE CR1 717 chr12 17352899 17354244 CR1-L3A_Croc 325 + 17352899 17354244 0 3 673,240,119, 0,977,1226, +,+,+, 166503 LINE CR1 718 chr12 17540186 17544968 ENS1-LTR 867 - 17540186 17544968 0 3 973,2836,973, 0,973,3809, -,-,-, 166557 LTR ERVL 720 chr12 17790528 17790648 CR1-F2 368 + 17790528 17790648 0 2 69,26, 0,94, +,+, 166639 LINE CR1 726 chr12 18587791 18588147 CR1-C4 696 - 18587791 18588147 0 2 167,188, 0,168, -,-, 166896 LINE CR1 727 chr12 18702047 18702640 CR1-Y4 411 + 18702047 18702640 0 2 365,228, 0,365, +,+, 166963 LINE CR1 730 chr12 19130704 19132362 GGERVL18-int 479 + 19130704 19132362 0 3 735,230,693, 0,735,965, +,+,+, 167124 LTR ERVL 735 chr12 19717700 19718446 CR1-Y2_Aves 132 - 19717700 19718446 0 2 364,349, 0,397, -,-, 167314 LINE CR1 736 chr12 19818927 19820124 CR1-C2 799 - 19818927 19820124 0 2 817,42, 0,1155, -,-, 167369 LINE CR1 736 chr12 19907311 19907946 CR1-L3B_Croc 182 - 19907311 19907946 0 2 178,206, 0,429, -,-, 167399 LINE CR1 585 chr12_NT_462048v1_random 12356 15329 GGLTR7-int 789 - 12356 15329 0 4 219,400,1077,1257, 0,219,639,1716, -,-,-,-, 167432 LTR ERV1 585 chr12_NT_462048v1_random 25603 28214 GGERVL-B-int 737 + 25603 28214 0 3 784,473,1349, 0,788,1262, +,+,+, 167441 LTR ERVL 585 chr12_NT_462054v1_random 11347 12969 CR1-F2 297 - 11347 12969 0 2 148,571, 0,1051, -,-, 167510 LINE CR1 585 chr12_NT_462054v1_random 17509 18920 CR1-F2 394 - 17509 18920 0 2 144,457, 0,954, -,-, 167512 LINE CR1 585 chr12_NT_462054v1_random 17655 18453 CR1-H2 790 - 17655 18453 0 2 651,77, 0,721, -,-, 167513 LINE CR1 585 chr12_NT_462060v1_random 3066 3595 GGLTR3F1 930 + 3066 3595 0 2 36,493, 0,36, +,+, 167565 LTR ERVL 585 chr12_NT_462070v1_random 9642 9731 (T)n 854 + 9642 9731 0 2 23,20, 0,69, +,+, 167628 Simple_repeat Simple_repeat 585 chr12_NT_462104v1_random 3240 3748 CR1-Y1_Aves 385 + 3240 3748 0 2 210,210, 0,298, +,+, 167724 LINE CR1 585 chr12_NT_462149v1_random 85 1016 CR1-C4 502 + 85 1016 0 2 809,122, 0,809, +,+, 167820 LINE CR1 588 chr13 501931 502553 GGLTR5A 312 - 501931 502553 0 2 115,360, 0,262, -,-, 167883 LTR ERVL 588 chr13 507966 509436 CR1-C4 378 - 507966 509436 0 3 1019,269,182, 0,1019,1288, -,-,-, 167889 LINE CR1 588 chr13 509966 513190 GGERVL-C-int 247 - 509966 513190 0 3 698,49,157, 0,2105,3067, -,-,-, 167892 LTR ERVL 588 chr13 513869 514510 GGLTR5A 321 - 513869 514510 0 2 124,356, 0,285, -,-, 167894 LTR ERVL 588 chr13 519809 521277 CR1-C4 405 - 519809 521277 0 3 1013,268,187, 0,1013,1281, -,-,-, 167901 LINE CR1 589 chr13 524555 525190 CR1-C4 349 - 524555 525190 0 3 197,270,167, 0,197,468, -,-,-, 167908 LINE CR1 589 chr13 527905 528788 GGLTR5A 430 - 527905 528788 0 2 122,254, 0,629, -,-, 167913 LTR ERVL 589 chr13 529242 529864 GGLTR5A 334 - 529242 529864 0 2 126,360, 0,262, -,-, 167918 LTR ERVL 589 chr13 535284 536764 CR1-C4 356 - 535284 536764 0 3 1026,269,185, 0,1026,1295, -,-,-, 167923 LINE CR1 589 chr13 537284 539564 GGERVL-C-int 255 - 537284 539564 0 3 198,202,154, 0,478,2126, -,-,-, 167926 LTR ERVL 589 chr13 541198 541832 GGLTR5A 339 - 541198 541832 0 2 158,401, 0,233, -,-, 167928 LTR ERVL 589 chr13 585446 586713 CR1-E 540 - 585446 586713 0 2 346,826, 0,441, -,-, 167972 LINE CR1 589 chr13 598582 600045 CR1-F2 370 - 598582 600045 0 3 1013,269,181, 0,1013,1282, -,-,-, 167988 LINE CR1 589 chr13 600576 603791 GGERVL-C-int 239 - 600576 603791 0 3 687,49,157, 0,2094,3058, -,-,-, 167991 LTR ERVL 589 chr13 610352 611822 CR1-C4 333 - 610352 611822 0 3 1015,269,186, 0,1015,1284, -,-,-, 167999 LINE CR1 589 chr13 612353 614955 GGERVL-C-int 194 - 612353 614955 0 2 687,119, 0,2483, -,-, 168002 LTR ERVL 589 chr13 616592 617228 GGLTR5A 369 - 616592 617228 0 2 126,349, 0,287, -,-, 168006 LTR ERVL 589 chr13 622656 624125 CR1-C4 336 - 622656 624125 0 3 1014,269,186, 0,1014,1283, -,-,-, 168011 LINE CR1 589 chr13 624660 628001 GGERVL-C-int 164 - 624660 628001 0 3 688,112,218, 0,2191,3123, -,-,-, 168014 LTR ERVL 589 chr13 634651 636492 CR1-D 190 - 634651 636492 0 2 1028,260, 0,1581, -,-, 168021 LINE CR1 589 chr13 639390 640278 GGLTR5A 409 - 639390 640278 0 2 122,254, 0,634, -,-, 168028 LTR ERVL 589 chr13 640732 641354 GGLTR5A 339 - 640732 641354 0 2 126,360, 0,262, -,-, 168033 LTR ERVL 589 chr13 649215 650684 CR1-C4 409 - 649215 650684 0 3 1013,269,187, 0,1013,1282, -,-,-, 168040 LINE CR1 589 chr13 653661 654309 GGLTR5A 250 - 653661 654309 0 2 127,353, 0,295, -,-, 168045 LTR ERVL 590 chr13 664522 665258 CR1-E 502 + 664522 665258 0 2 385,351, 0,385, +,+, 168055 LINE CR1 590 chr13 666184 668230 GGLTR5B 330 + 666184 668230 0 2 89,169, 0,1877, +,+, 168057 LTR ERVL 590 chr13 713864 714088 CR1-C4 523 - 713864 714088 0 2 196,28, 0,196, -,-, 168091 LINE CR1 591 chr13 796790 797763 CR1-Y4 422 - 796790 797763 0 2 883,87, 0,886, -,-, 168135 LINE CR1 591 chr13 812420 813462 CR1-Y4 487 - 812420 813462 0 2 950,90, 0,952, -,-, 168143 LINE CR1 591 chr13 822246 823219 CR1-Y4 422 - 822246 823219 0 2 883,87, 0,886, -,-, 168146 LINE CR1 591 chr13 830661 831656 CR1-Y4 493 - 830661 831656 0 2 908,87, 0,908, -,-, 168150 LINE CR1 591 chr13 837270 838305 CR1-Y4 469 - 837270 838305 0 2 944,89, 0,946, -,-, 168152 LINE CR1 592 chr13 956034 957297 CR1-H 801 - 956034 957297 0 2 1016,247, 0,1016, -,-, 168209 LINE CR1 592 chr13 977156 977467 CR1-D2 594 - 977156 977467 0 2 143,168, 0,143, -,-, 168216 LINE CR1 592 chr13 985740 986430 CR1-C4 217 + 985740 986430 0 2 460,209, 0,481, +,+, 168225 LINE CR1 593 chr13 1070493 1070624 (ATCCC)n 538 + 1070493 1070624 0 2 49,40, 0,91, +,+, 168286 Simple_repeat Simple_repeat 593 chr13 1130352 1132392 CR1-C4 670 + 1130352 1132392 0 2 654,894, 0,1146, +,+, 168317 LINE CR1 595 chr13 1326874 1328595 CR1-L3B_Croc 256 - 1326874 1328595 0 3 456,95,406, 0,974,1315, -,-,-, 168398 LINE CR1 595 chr13 1401896 1404128 CR1-D2 666 + 1401896 1404128 0 2 1147,159, 0,2073, +,+, 168425 LINE CR1 596 chr13 1477668 1478347 GGLTR8B 500 - 1477668 1478347 0 2 352,327, 0,352, -,-, 168476 LTR ERVL 596 chr13 1478370 1480108 CR1-Y2_Aves 330 + 1478370 1480108 0 2 948,786, 0,952, +,+, 168477 LINE CR1 597 chr13 1594026 1594923 CR1-C4 554 + 1594026 1594923 0 2 434,462, 0,435, +,+, 168533 LINE CR1 597 chr13 1597174 1599325 Charlie12_GG 505 - 1597174 1599325 0 2 435,795, 0,1356, -,-, 168536 DNA hAT-Charlie 597 chr13 1656246 1656585 GGLTR8B 365 + 1656246 1656585 0 2 132,192, 0,147, +,+, 168563 LTR ERVL 597 chr13 1664475 1668747 GGERVL-B-int 905 - 1664475 1668747 0 2 1264,2302, 0,1970, -,-, 168568 LTR ERVL 597 chr13 1668810 1669912 Z-REP 582 - 1668810 1669912 0 2 292,741, 0,361, -,-, 168569 Satellite macro 597 chr13 1669910 1672693 CR1-H 783 - 1669910 1672693 0 3 400,884,516, 0,1013,2267, -,-,-, 168570 LINE CR1 597 chr13 1674145 1674904 (CAAGG)n 637 + 1674145 1674904 0 3 142,112,178, 0,452,581, +,+,+, 168573 Simple_repeat Simple_repeat 597 chr13 1675012 1676015 (CAAGG)n 642 + 1675012 1676015 0 4 166,369,225,235, 0,166,543,768, +,+,+,+, 168577 Simple_repeat Simple_repeat 597 chr13 1676227 1676728 (CAAGG)n 540 + 1676227 1676728 0 2 221,67, 0,434, +,+, 168579 Simple_repeat Simple_repeat 597 chr13 1676751 1677712 (CAGGC)n 510 + 1676751 1677712 0 4 204,160,17,196, 0,228,570,765, +,+,+,+, 168582 Simple_repeat Simple_repeat 597 chr13 1678063 1678614 (CAGGC)n 521 + 1678063 1678614 0 3 179,169,176, 0,192,375, +,+,+, 168589 Simple_repeat Simple_repeat 597 chr13 1681058 1681706 (CCTCG)n 666 + 1681058 1681706 0 2 225,224, 0,424, +,+, 168594 Simple_repeat Simple_repeat 597 chr13 1683095 1685900 Char12Mar1_GG 434 - 1683095 1685900 0 2 904,251, 0,2554, -,-, 168602 DNA hAT-Charlie 597 chr13 1691872 1694730 Char12Mar1_GG 458 - 1691872 1694730 0 2 957,245, 0,2613, -,-, 168611 DNA hAT-Charlie 597 chr13 1697114 1700835 CR1-X2 479 + 1697114 1700835 0 2 1132,358, 0,3363, +,+, 168614 LINE CR1 597 chr13 1698250 1700101 CR1-C4 500 + 1698250 1700101 0 2 255,1510, 0,341, +,+, 168615 LINE CR1 598 chr13 1759849 1760242 GGLTR5B 149 - 1759849 1760242 0 2 120,182, 0,211, -,-, 168658 LTR ERVL 599 chr13 1961763 1962347 CR1-Y2_Aves 199 - 1961763 1962347 0 2 173,96, 0,488, -,-, 168794 LINE CR1 600 chr13 1977382 1977921 (CATCC)n 703 + 1977382 1977921 0 2 178,342, 0,197, +,+, 168809 Simple_repeat Simple_repeat 600 chr13 2022792 2022846 (TGTTT)n 572 + 2022792 2022846 0 2 10,9, 0,45, +,+, 168839 Simple_repeat Simple_repeat 600 chr13 2056963 2057572 CR1-L3B_Croc 331 + 2056963 2057572 0 2 185,238, 0,371, +,+, 168862 LINE CR1 601 chr13 2155185 2155755 REP131 242 - 2155185 2155755 0 2 167,388, 0,182, -,-, 168919 DNA? DNA? 601 chr13 2161870 2162636 CR1-L3B_Croc 223 - 2161870 2162636 0 2 392,106, 0,660, -,-, 168922 LINE CR1 602 chr13 2269949 2270227 GGLTR8B 516 - 2269949 2270227 0 2 155,121, 0,157, -,-, 168982 LTR ERVL 602 chr13 2294610 2295484 CR1-F2 460 + 2294610 2295484 0 2 129,82, 0,792, +,+, 168999 LINE CR1 602 chr13 2341731 2342387 CR1-3_Croc 318 - 2341731 2342387 0 2 98,170, 0,486, -,-, 169022 LINE CR1 602 chr13 2344234 2344569 CR1-L3B_Croc 332 + 2344234 2344569 0 2 130,191, 0,144, +,+, 169024 LINE CR1 603 chr13 2361645 2361728 (GCC)n 390 + 2361645 2361728 0 2 29,30, 0,53, +,+, 169036 Simple_repeat Simple_repeat 603 chr13 2366248 2367655 CR1-L3B_Croc 129 + 2366248 2367655 0 2 198,581, 0,826, +,+, 169040 LINE CR1 606 chr13 2780004 2780781 CR1-C4 500 + 2780004 2780781 0 2 255,522, 0,255, +,+, 169190 LINE CR1 607 chr13 2923311 2923915 CR1-C3 594 - 2923311 2923915 0 2 548,56, 0,548, -,-, 169228 LINE CR1 607 chr13 2932211 2934818 Char12Mar1_GG 418 - 2932211 2934818 0 2 19,323, 0,2284, -,-, 169231 DNA hAT-Charlie 608 chr13 3034472 3035090 CR1-X1 652 + 3034472 3035090 0 2 539,79, 0,539, +,+, 169272 LINE CR1 611 chr13 3426176 3426527 Char12Mar1_GG 635 - 3426176 3426527 0 2 153,193, 0,158, -,-, 169440 DNA hAT-Charlie 611 chr13 3461706 3462129 CR1-D2 378 + 3461706 3462129 0 2 138,79, 0,344, +,+, 169455 LINE CR1 611 chr13 3518771 3519238 CR1-D2 701 - 3518771 3519238 0 2 252,215, 0,252, -,-, 169481 LINE CR1 612 chr13 3580648 3580859 UCON2 347 - 3580648 3580859 0 2 81,100, 0,111, -,-, 169501 DNA? DNA? 612 chr13 3629997 3631444 CR1-X2 501 - 3629997 3631444 0 4 127,214,348,422, 0,450,665,1025, -,-,-,-, 169524 LINE CR1 612 chr13 3647930 3648657 CR1-C4 403 - 3647930 3648657 0 3 69,398,150, 0,69,577, -,-,-, 169532 LINE CR1 612 chr13 3650213 3652055 CR1-E 463 + 3650213 3652055 0 2 29,300, 0,1542, +,+, 169537 LINE CR1 614 chr13 3903175 3903563 CR1-11_Crp 196 - 3903175 3903563 0 2 197,136, 0,252, -,-, 169620 LINE CR1 615 chr13 4017023 4018033 Mariner1_GG 599 - 4017023 4018033 0 2 574,379, 0,631, -,-, 169663 DNA TcMar-Mariner 616 chr13 4112567 4113368 CR1-C4 555 + 4112567 4113368 0 2 72,704, 0,97, +,+, 169711 LINE CR1 616 chr13 4116389 4116784 GGLTR5B 518 + 4116389 4116784 0 2 82,178, 0,217, +,+, 169714 LTR ERVL 616 chr13 4134701 4135310 CR1-D 723 - 4134701 4135310 0 2 530,58, 0,551, -,-, 169721 LINE CR1 617 chr13 4212092 4213238 Mariner1_GG 617 - 4212092 4213238 0 2 241,905, 0,241, -,-, 169763 DNA TcMar-Mariner 617 chr13 4218495 4222992 CR1-Y2_Aves 139 - 4218495 4222992 0 2 125,893, 0,3604, -,-, 169765 LINE CR1 618 chr13 4424457 4424804 CR1-Y2_Aves 342 + 4424457 4424804 0 2 255,72, 0,275, +,+, 169854 LINE CR1 620 chr13 4625031 4625664 CR1-C 782 - 4625031 4625664 0 2 359,274, 0,359, -,-, 169930 LINE CR1 620 chr13 4714032 4714695 CR1-Y1_Aves 434 - 4714032 4714695 0 2 470,169, 0,494, -,-, 169959 LINE CR1 622 chr13 4912156 4912542 L2-1_AMi 281 + 4912156 4912542 0 2 129,89, 0,297, +,+, 170020 LINE L2 622 chr13 4930552 4938527 Char12Mar1_GG 744 - 4930552 4938527 0 2 47,47, 0,7928, -,-, 170026 DNA hAT-Charlie 623 chr13 5094078 5095378 Char12Mar1_GG 718 - 5094078 5095378 0 2 153,399, 0,901, -,-, 170090 DNA hAT-Charlie 625 chr13 5346159 5346457 GGLTR5B 618 + 5346159 5346457 0 2 107,191, 0,107, +,+, 170234 LTR ERVL 626 chr13 5444387 5446094 CR1-L3B_Croc 84 + 5444387 5446094 0 2 299,272, 0,1435, +,+, 170289 LINE CR1 627 chr13 5592152 5593501 CR1-Y4 525 + 5592152 5593501 0 2 558,779, 0,570, +,+, 170376 LINE CR1 628 chr13 5660519 5661482 CR1-E 208 - 5660519 5661482 0 2 230,678, 0,285, -,-, 170425 LINE CR1 628 chr13 5723974 5725312 CR1-D2 545 - 5723974 5725312 0 2 82,896, 0,442, -,-, 170456 LINE CR1 629 chr13 5814847 5815558 Char12Mar1_GG 646 - 5814847 5815558 0 2 323,206, 0,505, -,-, 170512 DNA hAT-Charlie 630 chr13 5977452 5977730 CR1-C2 449 - 5977452 5977730 0 2 16,154, 0,124, -,-, 170612 LINE CR1 631 chr13 6149127 6150147 CR1-F2 369 - 6149127 6150147 0 2 101,578, 0,442, -,-, 170704 LINE CR1 632 chr13 6234304 6234521 CR1-Y2_Aves 387 - 6234304 6234521 0 2 135,66, 0,151, -,-, 170737 LINE CR1 633 chr13 6332770 6332842 (A)n 1000 + 6332770 6332842 0 2 20,20, 0,52, +,+, 170783 Simple_repeat Simple_repeat 634 chr13 6436322 6436651 Char12Mar1_GG 726 - 6436322 6436651 0 2 172,157, 0,172, -,-, 170835 DNA hAT-Charlie 634 chr13 6449770 6450099 Char12Mar1_GG 726 - 6449770 6450099 0 2 172,157, 0,172, -,-, 170841 DNA hAT-Charlie 634 chr13 6505345 6506021 Mariner1_GG 568 - 6505345 6506021 0 2 355,298, 0,378, -,-, 170870 DNA TcMar-Mariner 635 chr13 6625126 6625965 CR1-X2 406 + 6625126 6625965 0 2 136,703, 0,136, +,+, 170906 LINE CR1 635 chr13 6644440 6644850 CR1-C4 533 - 6644440 6644850 0 2 199,208, 0,202, -,-, 170918 LINE CR1 636 chr13 6700756 6701180 CR1-Y2_Aves 262 - 6700756 6701180 0 2 250,165, 0,259, -,-, 170939 LINE CR1 637 chr13 6821669 6822161 CR1-C4 596 - 6821669 6822161 0 2 352,131, 0,361, -,-, 170988 LINE CR1 637 chr13 6824320 6826109 Mariner1_GG 542 - 6824320 6826109 0 2 350,966, 0,823, -,-, 170989 DNA TcMar-Mariner 639 chr13 7095836 7096779 CR1-Y2_Aves 344 - 7095836 7096779 0 2 515,427, 0,516, -,-, 171114 LINE CR1 639 chr13 7107051 7107207 CR1-F2 441 - 7107051 7107207 0 2 109,46, 0,110, -,-, 171118 LINE CR1 639 chr13 7162959 7163160 GGLTR3C1 489 + 7162959 7163160 0 2 81,120, 0,81, +,+, 171153 LTR ERVL 639 chr13 7183209 7183587 CR1-Y4 646 + 7183209 7183587 0 2 290,38, 0,340, +,+, 171159 LINE CR1 640 chr13 7251658 7251775 (A)n 760 + 7251658 7251775 0 2 25,31, 0,86, +,+, 171201 Simple_repeat Simple_repeat 640 chr13 7316271 7321561 CR1-C4 315 - 7316271 7321561 0 2 205,159, 0,5131, -,-, 171232 LINE CR1 640 chr13 7321569 7322340 CR1-D 683 - 7321569 7322340 0 2 236,198, 0,573, -,-, 171234 LINE CR1 641 chr13 7391446 7392553 Mariner1_GG 487 - 7391446 7392553 0 2 904,200, 0,907, -,-, 171273 DNA TcMar-Mariner 641 chr13 7445130 7445449 Mariner1_GG 466 - 7445130 7445449 0 2 261,58, 0,261, -,-, 171297 DNA TcMar-Mariner 643 chr13 7674700 7678405 CR1-Y4 570 - 7674700 7678405 0 2 216,506, 0,3199, -,-, 171412 LINE CR1 643 chr13 7718959 7719406 CR1-E 281 - 7718959 7719406 0 2 240,193, 0,254, -,-, 171438 LINE CR1 645 chr13 7942849 7943616 CR1-L3B_Croc 152 + 7942849 7943616 0 2 145,318, 0,449, +,+, 171534 LINE CR1 647 chr13 8130600 8131335 CR1-D2 635 - 8130600 8131335 0 4 385,62,139,138, 0,391,455,597, -,-,-,-, 171610 LINE CR1 647 chr13 8173921 8174897 Char12Mar1_GG 468 - 8173921 8174897 0 2 878,98, 0,878, -,-, 171627 DNA hAT-Charlie 647 chr13 8211093 8211352 CR1-X2 599 + 8211093 8211352 0 2 101,60, 0,199, +,+, 171641 LINE CR1 647 chr13 8212278 8212598 GGLTR5B 407 - 8212278 8212598 0 2 94,181, 0,139, -,-, 171643 LTR ERVL 648 chr13 8270409 8270819 GGLTR4A 578 + 8270409 8270819 0 2 248,119, 0,291, +,+, 171671 LTR ERVL 648 chr13 8329080 8331883 CR1-D2 571 + 8329080 8331883 0 2 422,472, 0,2331, +,+, 171693 LINE CR1 649 chr13 8448936 8449209 CR1-E 797 - 8448936 8449209 0 2 62,200, 0,73, -,-, 171746 LINE CR1 650 chr13 8578462 8578577 (GGCCG)n 801 + 8578462 8578577 0 2 58,30, 0,85, +,+, 171796 Simple_repeat Simple_repeat 650 chr13 8614558 8620384 GGERV10_LTR 993 - 8614558 8620384 0 3 220,5385,220, 0,220,5606, -,-,-, 171810 LTR ERVL 651 chr13 8658164 8667625 CR1-F2 313 - 8658164 8667625 0 3 131,152,199, 0,3320,9262, -,-,-, 171835 LINE CR1 652 chr13 8841191 8841460 GGLTR5A 542 + 8841191 8841460 0 2 174,92, 0,177, +,+, 171906 LTR ERVL 656 chr13 9427626 9429782 CR1-F2 345 + 9427626 9429782 0 2 392,174, 0,1982, +,+, 172126 LINE CR1 657 chr13 9553586 9555070 CR1-C4 664 - 9553586 9555070 0 2 556,928, 0,556, -,-, 172177 LINE CR1 658 chr13 9657520 9657711 CR1-D2 678 - 9657520 9657711 0 2 101,90, 0,101, -,-, 172216 LINE CR1 659 chr13 9707675 9707959 Char12Mar1_GG 714 - 9707675 9707959 0 2 154,128, 0,156, -,-, 172239 DNA hAT-Charlie 660 chr13 9842801 9843519 REP131 220 - 9842801 9843519 0 2 374,119, 0,599, -,-, 172324 DNA? DNA? 662 chr13 10147558 10147682 GA-rich 581 + 10147558 10147682 0 2 27,65, 0,59, +,+, 172453 Low_complexity Low_complexity 662 chr13 10184085 10184368 CR1-Y4 508 + 10184085 10184368 0 2 98,185, 0,98, +,+, 172481 LINE CR1 664 chr13 10364717 10364821 (CCG)n 400 + 10364717 10364821 0 2 52,15, 0,89, +,+, 172571 Simple_repeat Simple_repeat 664 chr13 10421089 10421315 CR1-C4 435 + 10421089 10421315 0 2 150,76, 0,150, +,+, 172606 LINE CR1 664 chr13 10443210 10443331 G-rich 475 + 10443210 10443331 0 2 47,38, 0,83, +,+, 172612 Low_complexity Low_complexity 665 chr13 10524231 10524905 CR1-F2 669 + 10524231 10524905 0 2 632,42, 0,632, +,+, 172651 LINE CR1 667 chr13 10814577 10814982 X1_LINE 345 + 10814577 10814982 0 2 84,127, 0,278, +,+, 172779 LINE CR1 670 chr13 11228871 11228986 (T)n 677 + 11228871 11228986 0 2 27,34, 0,81, +,+, 172983 Simple_repeat Simple_repeat 671 chr13 11364648 11365066 CR1-L3B_Croc 253 - 11364648 11365066 0 2 126,130, 0,288, -,-, 173026 LINE CR1 673 chr13 11537774 11538795 CR1-G 429 + 11537774 11538795 0 2 16,90, 0,931, +,+, 173091 LINE CR1 675 chr13 11835716 11836658 CR1-L3B_Croc 276 - 11835716 11836658 0 2 371,252, 0,690, -,-, 173221 LINE CR1 675 chr13 11851039 11851647 CR1-11_Crp 343 - 11851039 11851647 0 2 158,237, 0,371, -,-, 173228 LINE CR1 675 chr13 11858846 11858950 GA-rich 298 + 11858846 11858950 0 2 11,11, 0,93, +,+, 173230 Low_complexity Low_complexity 677 chr13 12187729 12188256 CR1-Y2_Aves 236 + 12187729 12188256 0 2 260,178, 0,349, +,+, 173365 LINE CR1 678 chr13 12247618 12248290 CR1-L3B_Croc 303 - 12247618 12248290 0 3 144,145,242, 0,265,430, -,-,-, 173392 LINE CR1 680 chr13 12459569 12460225 CR1-X1 526 - 12459569 12460225 0 2 178,478, 0,178, -,-, 173483 LINE CR1 680 chr13 12536534 12536601 (A)n 913 + 12536534 12536601 0 2 25,17, 0,50, +,+, 173518 Simple_repeat Simple_repeat 684 chr13 12998655 12998777 A-rich 636 + 12998655 12998777 0 2 35,27, 0,95, +,+, 173701 Low_complexity Low_complexity 686 chr13 13340609 13341039 (CAATG)n 371 + 13340609 13341039 0 2 181,236, 0,194, +,+, 173840 Simple_repeat Simple_repeat 687 chr13 13467864 13468213 Char12Mar1_GG 705 - 13467864 13468213 0 2 293,35, 0,314, -,-, 173882 DNA hAT-Charlie 694 chr13 14296433 14296851 CR1-Y2_Aves 193 + 14296433 14296851 0 2 131,175, 0,243, +,+, 174147 LINE CR1 694 chr13 14313564 14314914 L2-1_Crp 193 - 14313564 14314914 0 2 184,306, 0,1044, -,-, 174151 LINE L2 696 chr13 14644089 14644495 CR1-C4 682 + 14644089 14644495 0 2 249,37, 0,369, +,+, 174244 LINE CR1 699 chr13 15007855 15008159 CR1-D2 726 + 15007855 15008159 0 2 227,77, 0,227, +,+, 174379 LINE CR1 701 chr13 15297275 15298301 CR1-D2 584 - 15297275 15298301 0 2 760,261, 0,765, -,-, 174506 LINE CR1 701 chr13 15308691 15309717 CR1-D2 584 - 15308691 15309717 0 2 760,261, 0,765, -,-, 174514 LINE CR1 701 chr13 15324913 15325699 GGLTR10D-int 813 - 15324913 15325699 0 2 282,501, 0,285, -,-, 174520 LTR ERVK 701 chr13 15327269 15328718 GGLTR7-int 746 - 15327269 15328718 0 4 628,323,281,217, 0,628,951,1232, -,-,-,-, 174522 LTR ERV1 701 chr13 15329204 15330122 GGLTR10C-int 745 - 15329204 15330122 0 2 402,282, 0,636, -,-, 174523 LTR ERVK 702 chr13 15346944 15347702 GGLTR12C 397 - 15346944 15347702 0 2 247,120, 0,638, -,-, 174527 LTR ERVL 702 chr13 15400312 15403122 CR1-F2 490 - 15400312 15403122 0 2 41,84, 0,2726, -,-, 174539 LINE CR1 702 chr13 15455738 15456328 CR1-D2 585 - 15455738 15456328 0 2 124,410, 0,180, -,-, 174571 LINE CR1 706 chr13 15867683 15868280 CR1-L3A_Croc 260 + 15867683 15868280 0 2 216,334, 0,263, +,+, 174753 LINE CR1 707 chr13 16026855 16027076 CR1-Y4 511 - 16026855 16027076 0 2 30,191, 0,30, -,-, 174825 LINE CR1 709 chr13 16351352 16352032 CR1-G 308 - 16351352 16352032 0 2 156,419, 0,261, -,-, 174955 LINE CR1 711 chr13 16555925 16556033 (TTTG)n 440 + 16555925 16556033 0 2 62,8, 0,100, +,+, 175026 Simple_repeat Simple_repeat 714 chr13 16915485 16917109 CR1-F2 480 + 16915485 16917109 0 2 111,97, 0,1527, +,+, 175178 LINE CR1 714 chr13 16960938 16961574 CR1-Y4 498 + 16960938 16961574 0 2 293,335, 0,301, +,+, 175201 LINE CR1 714 chr13 16984861 16985128 Charlie12_GG 458 - 16984861 16985128 0 2 96,29, 0,238, -,-, 175218 DNA hAT-Charlie 714 chr13 16989331 16989707 Char12Mar1_GG 629 - 16989331 16989707 0 2 268,93, 0,283, -,-, 175221 DNA hAT-Charlie 719 chr13 17684452 17684600 CR1-D2 572 + 17684452 17684600 0 2 81,66, 0,82, +,+, 175482 LINE CR1 720 chr13 17758096 17758361 CR1-Y2_Aves 377 - 17758096 17758361 0 2 25,113, 0,152, -,-, 175516 LINE CR1 721 chr13 17911178 17911319 G-rich 584 + 17911178 17911319 0 2 42,38, 0,103, +,+, 175559 Low_complexity Low_complexity 723 chr13 18190702 18191495 CR1-L3B_Croc 212 + 18190702 18191495 0 2 105,134, 0,659, +,+, 175679 LINE CR1 724 chr13 18225127 18226545 CR1-D 675 - 18225127 18226545 0 2 64,1012, 0,406, -,-, 175696 LINE CR1 724 chr13 18226545 18226872 GGERV10_LTR 355 - 18226545 18226872 0 2 157,80, 0,247, -,-, 175698 LTR ERVL 724 chr13 18293114 18293999 GGLTR8B 297 - 18293114 18293999 0 2 102,629, 0,256, -,-, 175738 LTR ERVL 724 chr13 18323374 18323868 CR1-X2 549 + 18323374 18323868 0 2 87,398, 0,96, +,+, 175745 LINE CR1 724 chr13 18345821 18346753 CR1-Y2_Aves 379 + 18345821 18346753 0 2 86,125, 0,807, +,+, 175762 LINE CR1 725 chr13 18397601 18398462 CR1-G 477 - 18397601 18398462 0 2 386,158, 0,703, -,-, 175793 LINE CR1 585 chr13_NT_462186v1_random 3226 3885 GGLTR5A 335 + 3226 3885 0 2 347,131, 0,528, +,+, 175799 LTR ERVL 585 chr13_NT_462186v1_random 5380 8068 GGERVL-C-int 194 + 5380 8068 0 2 119,687, 0,2001, +,+, 175800 LTR ERVL 585 chr13_NT_462186v1_random 8598 10094 CR1-C4 364 + 8598 10094 0 3 185,287,1024, 0,185,472, +,+,+, 175805 LINE CR1 585 chr13_NT_462186v1_random 15479 16121 GGLTR5A 381 + 15479 16121 0 2 355,126, 0,516, +,+, 175808 LTR ERVL 585 chr13_NT_462186v1_random 17758 20431 GGERVL-A-int 174 + 17758 20431 0 2 119,658, 0,2015, +,+, 175810 LTR ERVL 585 chr13_NT_462186v1_random 20993 21912 CR1-C4 199 + 20993 21912 0 2 148,553, 0,366, +,+, 175815 LINE CR1 585 chr13_NT_462186v1_random 22717 24186 CR1-C4 341 + 22717 24186 0 3 186,270,1013, 0,186,456, +,+,+, 175819 LINE CR1 585 chr13_NT_462186v1_random 29640 30283 GGLTR5A 374 + 29640 30283 0 2 276,126, 0,517, +,+, 175824 LTR ERVL 585 chr13_NT_462186v1_random 32059 33225 CR1-C3 513 + 32059 33225 0 2 830,163, 0,1003, +,+, 175826 LINE CR1 585 chr13_NT_462186v1_random 35061 36384 CR1-C4 345 + 35061 36384 0 3 98,1046,120, 0,146,1203, +,+,+, 175828 LINE CR1 585 chr13_NT_462186v1_random 41778 42421 GGLTR5A 374 + 41778 42421 0 2 276,126, 0,517, +,+, 175832 LTR ERVL 585 chr13_NT_462186v1_random 44124 46292 GGERVL-C-int 293 + 44124 46292 0 2 50,710, 0,1458, +,+, 175834 LTR ERVL 585 chr13_NT_462186v1_random 46823 48292 CR1-C4 343 + 46823 48292 0 3 185,270,1014, 0,185,455, +,+,+, 175838 LINE CR1 585 chr13_NT_462187v1_random 1872 2908 CR1-Y4 484 - 1872 2908 0 2 944,90, 0,946, -,-, 175845 LINE CR1 585 chr13_NT_462187v1_random 21721 22747 CR1-Y4 488 - 21721 22747 0 2 939,87, 0,939, -,-, 175854 LINE CR1 585 chr13_NT_462188v1_random 3140 3783 GGLTR5A 349 + 3140 3783 0 2 356,126, 0,517, +,+, 175872 LTR ERVL 585 chr13_NT_462188v1_random 4384 7654 GGERVL-C-int 227 + 4384 7654 0 3 214,49,708, 0,1103,2562, +,+,+, 175874 LTR ERVL 585 chr13_NT_462188v1_random 8185 9655 CR1-C4 342 + 8185 9655 0 3 185,270,1015, 0,185,455, +,+,+, 175878 LINE CR1 585 chr13_NT_462188v1_random 18562 20086 CR1-C4 405 + 18562 20086 0 3 198,238,1078, 0,198,446, +,+,+, 175890 LINE CR1 585 chr13_NT_462188v1_random 27674 30254 GGERVL-A-int 209 + 27674 30254 0 2 82,660, 0,1920, +,+, 175896 LTR ERVL 585 chr13_NT_462188v1_random 38193 38842 GGLTR5A 370 + 38193 38842 0 2 412,124, 0,525, +,+, 175904 LTR ERVL 585 chr13_NT_462188v1_random 40844 42019 CR1-C3 551 + 40844 42019 0 2 439,675, 0,500, +,+, 175908 LINE CR1 585 chr13_NT_462188v1_random 41996 42672 GGERVL-C-int 276 + 41996 42672 0 2 202,196, 0,480, +,+, 175909 LTR ERVL 585 chr13_NT_462188v1_random 43204 44661 CR1-C4 327 + 43204 44661 0 2 186,1271, 0,186, +,+, 175912 LINE CR1 585 chr13_NT_462189v1_random 1977 3818 CR1-D 190 - 1977 3818 0 2 1028,260, 0,1581, -,-, 175917 LINE CR1 585 chr13_NT_462189v1_random 6716 7608 GGLTR5A 409 - 6716 7608 0 2 122,254, 0,638, -,-, 175924 LTR ERVL 585 chr13_NT_462189v1_random 8062 8684 GGLTR5A 339 - 8062 8684 0 2 126,360, 0,262, -,-, 175929 LTR ERVL 585 chr13_NT_462189v1_random 14093 15558 CR1-C4 335 - 14093 15558 0 3 1011,269,185, 0,1011,1280, -,-,-, 175934 LINE CR1 585 chr13_NT_462189v1_random 16096 18775 GGERVL-A-int 186 - 16096 18775 0 2 679,119, 0,2560, -,-, 175937 LTR ERVL 585 chr13_NT_462189v1_random 20412 21063 GGLTR5A 356 - 20412 21063 0 2 126,412, 0,239, -,-, 175941 LTR ERVL 585 chr13_NT_462189v1_random 26513 27982 CR1-C4 407 - 26513 27982 0 3 1013,269,187, 0,1013,1282, -,-,-, 175946 LINE CR1 585 chr13_NT_462189v1_random 30956 31604 GGLTR5A 250 - 30956 31604 0 2 127,353, 0,295, -,-, 175951 LTR ERVL 585 chr13_NT_462190v1_random 10306 10943 CR1-E 546 - 10306 10943 0 2 495,98, 0,539, -,-, 175967 LINE CR1 585 chr13_NT_462191v1_random 428 1197 CR1-B2 761 - 428 1197 0 2 573,178, 0,591, -,-, 175980 LINE CR1 585 chr13_NT_462191v1_random 8918 11517 Char12Mar1_GG 466 - 8918 11517 0 2 904,266, 0,2333, -,-, 175986 DNA hAT-Charlie 585 chr13_NT_462191v1_random 9817 11257 CR1-E 609 + 9817 11257 0 2 671,769, 0,671, +,+, 175987 LINE CR1 585 chr13_NT_462191v1_random 16976 19784 Char12Mar1_GG 432 - 16976 19784 0 2 901,251, 0,2557, -,-, 175993 DNA hAT-Charlie 585 chr13_NT_462191v1_random 25755 26631 Char12Mar1_GG 405 - 25755 26631 0 2 642,208, 0,668, -,-, 176002 DNA hAT-Charlie 585 chr13_NT_462192v1_random 6450 7976 CR1-C4 416 + 6450 7976 0 3 187,242,1078, 0,187,448, +,+,+, 176013 LINE CR1 585 chr13_NT_462192v1_random 13341 13992 GGLTR5A 324 + 13341 13992 0 2 412,126, 0,525, +,+, 176018 LTR ERVL 585 chr13_NT_462192v1_random 18863 20335 CR1-C4 377 + 18863 20335 0 3 185,289,998, 0,185,474, +,+,+, 176025 LINE CR1 585 chr13_NT_462193v1_random 2957 3608 GGLTR5A 324 + 2957 3608 0 2 412,126, 0,525, +,+, 176030 LTR ERVL 585 chr13_NT_462193v1_random 5245 7939 GGERVL-A-int 181 + 5245 7939 0 2 119,680, 0,2014, +,+, 176032 LTR ERVL 585 chr13_NT_462193v1_random 8477 9943 CR1-C4 381 + 8477 9943 0 3 185,281,1000, 0,185,466, +,+,+, 176037 LINE CR1 585 chr13_NT_462193v1_random 18853 20193 CR1-C4 424 + 18853 20193 0 2 287,1053, 0,287, +,+, 176047 LINE CR1 585 chr13_NT_462194v1_random 2890 5693 Char12Mar1_GG 435 - 2890 5693 0 3 384,439,251, 0,456,2552, -,-,-, 176054 DNA hAT-Charlie 585 chr13_NT_462194v1_random 11619 17000 Char12Mar1_GG 404 - 11619 17000 0 2 877,251, 0,5130, -,-, 176063 DNA hAT-Charlie 585 chr13_NT_462194v1_random 18001 21672 Char12Mar1_GG 452 - 18001 21672 0 3 449,314,253, 0,1452,3418, -,-,-, 176068 DNA hAT-Charlie 585 chr13_NT_462196v1_random 4608 5999 CR1-C4 403 + 4608 5999 0 3 127,179,1064, 0,127,327, +,+,+, 176089 LINE CR1 585 chr13_NT_462196v1_random 11278 11919 GGLTR5A 325 + 11278 11919 0 2 404,126, 0,515, +,+, 176092 LTR ERVL 585 chr13_NT_462196v1_random 13547 16210 GGERVL-C-int 173 + 13547 16210 0 2 113,680, 0,1983, +,+, 176094 LTR ERVL 585 chr13_NT_462196v1_random 16734 18162 CR1-C4 322 + 16734 18162 0 3 179,260,989, 0,179,439, +,+,+, 176099 LINE CR1 585 chr13_NT_462197v1_random 3199 4669 CR1-C4 407 - 3199 4669 0 3 1015,269,186, 0,1015,1284, -,-,-, 176104 LINE CR1 585 chr13_NT_462197v1_random 13776 15795 CR1-C4 361 - 13776 15795 0 3 1585,268,166, 0,1585,1853, -,-,-, 176116 LINE CR1 585 chr13_NT_462197v1_random 18516 19383 GGLTR5A 368 - 18516 19383 0 2 122,347, 0,520, -,-, 176121 LTR ERVL 585 chr13_NT_462197v1_random 18638 20240 Z-REP 256 + 18638 20240 0 2 65,91, 0,1511, +,+, 176122 Satellite macro 585 chr13_NT_462200v1_random 6756 8194 CR1-C4 351 + 6756 8194 0 3 184,278,976, 0,184,462, +,+,+, 176146 LINE CR1 585 chr13_NT_462200v1_random 13564 14197 GGLTR5A 331 + 13564 14197 0 2 289,126, 0,507, +,+, 176148 LTR ERVL 585 chr13_NT_462200v1_random 14667 15563 GGLTR5A 397 + 14667 15563 0 2 251,124, 0,772, +,+, 176150 LTR ERVL 585 chr13_NT_462200v1_random 18314 19323 CR1-C4 325 + 18314 19323 0 3 188,263,543, 0,203,466, +,+,+, 176158 LINE CR1 585 chr13_NT_462201v1_random 10996 12466 CR1-C4 409 - 10996 12466 0 3 1015,269,186, 0,1015,1284, -,-,-, 176170 LINE CR1 585 chr13_NT_462203v1_random 2306 2956 GGLTR5A 267 + 2306 2956 0 2 411,126, 0,524, +,+, 176196 LTR ERVL 585 chr13_NT_462203v1_random 7826 9285 CR1-C4 377 + 7826 9285 0 3 185,281,993, 0,185,466, +,+,+, 176203 LINE CR1 585 chr13_NT_462203v1_random 14718 15351 GGLTR5A 331 + 14718 15351 0 2 348,158, 0,475, +,+, 176208 LTR ERVL 585 chr13_NT_462204v1_random 4033 4675 GGLTR5A 381 + 4033 4675 0 2 355,126, 0,516, +,+, 176213 LTR ERVL 585 chr13_NT_462204v1_random 9540 10987 CR1-C4 318 + 9540 10987 0 3 183,279,985, 0,183,462, +,+,+, 176220 LINE CR1 585 chr13_NT_462204v1_random 16410 17052 GGLTR5A 302 + 16410 17052 0 2 415,158, 0,484, +,+, 176225 LTR ERVL 585 chr13_NT_462205v1_random 13127 14848 CR1-G 502 + 13127 14848 0 3 601,156,388, 0,858,1333, +,+,+, 176230 LINE CR1 585 chr13_NT_462207v1_random 3894 6594 GGERVL-C-int 191 + 3894 6594 0 2 118,754, 0,1946, +,+, 176243 LTR ERVL 585 chr13_NT_462207v1_random 7174 8602 CR1-C4 410 + 7174 8602 0 3 143,269,1016, 0,143,412, +,+,+, 176248 LINE CR1 585 chr13_NT_462207v1_random 14021 14664 GGLTR5A 349 + 14021 14664 0 2 356,126, 0,517, +,+, 176252 LTR ERVL 585 chr13_NT_462208v1_random 8892 9251 Char12Mar1_GG 663 - 8892 9251 0 2 46,79, 0,280, -,-, 176258 DNA hAT-Charlie 585 chr13_NT_462208v1_random 15299 16618 CR1-Y4 480 + 15299 16618 0 2 560,747, 0,572, +,+, 176262 LINE CR1 585 chr13_NT_462209v1_random 6326 7787 CR1-C4 408 - 6326 7787 0 3 1015,249,186, 0,1026,1275, -,-,-, 176269 LINE CR1 585 chr13_NT_462210v1_random 2389 3912 CR1-C4 414 - 2389 3912 0 3 1077,249,187, 0,1087,1336, -,-,-, 176282 LINE CR1 585 chr13_NT_462210v1_random 6849 7500 GGLTR5A 356 - 6849 7500 0 2 126,412, 0,239, -,-, 176288 LTR ERVL 585 chr13_NT_462210v1_random 12912 14187 CR1-C4 463 - 12912 14187 0 3 970,248,47, 0,980,1228, -,-,-, 176294 LINE CR1 585 chr13_NT_462212v1_random 2689 4235 CR1-C4 361 + 2689 4235 0 3 201,233,1101, 0,201,445, +,+,+, 176308 LINE CR1 585 chr13_NT_462212v1_random 13236 14764 CR1-C4 354 + 13236 14764 0 3 198,239,1081, 0,198,447, +,+,+, 176317 LINE CR1 585 chr13_NT_462215v1_random 1354 2122 CR1-F2 580 + 1354 2122 0 2 186,582, 0,186, +,+, 176341 LINE CR1 585 chr13_NT_462216v1_random 3629 4279 GGLTR5A 371 - 3629 4279 0 2 126,364, 0,286, -,-, 176353 LTR ERVL 585 chr13_NT_462216v1_random 9699 11158 CR1-C4 416 - 9699 11158 0 3 1013,249,187, 0,1023,1272, -,-,-, 176358 LINE CR1 585 chr13_NT_462217v1_random 3699 5163 CR1-C4 412 - 3699 5163 0 3 1010,269,185, 0,1010,1279, -,-,-, 176366 LINE CR1 585 chr13_NT_462218v1_random 1606 2616 Mariner1_GG 599 - 1606 2616 0 2 574,379, 0,631, -,-, 176379 DNA TcMar-Mariner 585 chr13_NT_462221v1_random 5885 7409 CR1-C4 405 - 5885 7409 0 3 1078,249,187, 0,1088,1337, -,-,-, 176397 LINE CR1 585 chr13_NT_462221v1_random 10359 10967 GGLTR5A 303 - 10359 10967 0 2 92,357, 0,251, -,-, 176403 LTR ERVL 585 chr13_NT_462222v1_random 9297 10812 CR1-C4 385 - 9297 10812 0 3 1078,245,181, 0,1089,1334, -,-,-, 176416 LINE CR1 585 chr13_NT_462225v1_random 7917 9437 CR1-C4 397 - 7917 9437 0 3 1076,249,186, 0,1085,1334, -,-,-, 176448 LINE CR1 585 chr13_NT_462226v1_random 5173 6172 CR1-X2 608 + 5173 6172 0 3 423,378,186, 0,435,813, +,+,+, 176456 LINE CR1 585 chr13_NT_462226v1_random 7505 9044 CR1-F 137 + 7505 9044 0 3 12,39,1232, 0,268,307, +,+,+, 176457 LINE CR1 585 chr13_NT_462231v1_random 1507 2638 CR1-C4 403 - 1507 2638 0 2 862,269, 0,862, -,-, 176481 LINE CR1 585 chr13_NT_462238v1_random 4225 5683 CR1-C4 336 - 4225 5683 0 3 1008,269,181, 0,1008,1277, -,-,-, 176530 LINE CR1 585 chr13_NT_462238v1_random 6874 8002 CR1-C3 310 - 6874 8002 0 2 847,280, 0,848, -,-, 176534 LINE CR1 585 chr13_NT_462238v1_random 9758 10185 GGLTR5B 326 - 9758 10185 0 2 123,134, 0,293, -,-, 176536 LTR ERVL 585 chr13_NT_462241v1_random 5661 7118 CR1-C4 424 - 5661 7118 0 3 1011,249,187, 0,1021,1270, -,-,-, 176553 LINE CR1 585 chr13_NT_462242v1_random 542 993 (CAAGG)n 604 + 542 993 0 2 180,233, 0,218, +,+, 176562 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 3438 3990 (CAGGC)n 484 + 3438 3990 0 2 174,200, 0,352, +,+, 176576 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 5257 5642 (CAGGC)n 482 + 5257 5642 0 2 183,185, 0,200, +,+, 176585 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 5827 7366 (CAAGG)n 610 + 5827 7366 0 6 115,16,29,321,30,185, 0,294,693,762,1272,1354, +,+,+,+,+,+, 176588 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 6137 6520 (CAGGC)n 547 + 6137 6520 0 3 179,8,60, 0,179,323, +,+,+, 176590 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 7378 7437 (AGGCA)n 530 + 7378 7437 0 2 12,11, 0,48, +,+, 176593 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 7441 7806 (CAAGG)n 572 + 7441 7806 0 2 105,72, 0,293, +,+, 176595 Simple_repeat Simple_repeat 585 chr13_NT_462242v1_random 7958 9789 (CAAGG)n 555 + 7958 9789 0 8 187,176,232,147,11,272,175,193, 0,205,394,626,955,1138,1463,1638, +,+,+,+,+,+,+,+, 176598 Simple_repeat Simple_repeat 585 chr13_NT_462244v1_random 4274 4661 Char12Mar1_GG 696 - 4274 4661 0 2 324,51, 0,336, -,-, 176607 DNA hAT-Charlie 585 chr13_NT_462251v1_random 1168 2616 CR1-C4 337 + 1168 2616 0 3 187,265,996, 0,187,452, +,+,+, 176645 LINE CR1 585 chr13_NT_462251v1_random 7883 8525 GGLTR5A 311 + 7883 8525 0 2 411,125, 0,517, +,+, 176650 LTR ERVL 585 chr13_NT_462253v1_random 4931 6425 CR1-E 588 - 4931 6425 0 2 1204,122, 0,1372, -,-, 176664 LINE CR1 585 chr13_NT_462255v1_random 3854 4990 CR1-C4 460 - 3854 4990 0 2 1011,115, 0,1021, -,-, 176680 LINE CR1 585 chr13_NT_462255v1_random 7941 8397 GGLTR5B 316 - 7941 8397 0 2 123,161, 0,295, -,-, 176684 LTR ERVL 585 chr13_NT_462258v1_random 5566 5905 GGLTR8B 356 + 5566 5905 0 2 131,192, 0,147, +,+, 176696 LTR ERVL 585 chr13_NT_462276v1_random 3489 4135 GGLTR5A 322 + 3489 4135 0 2 482,122, 0,524, +,+, 176753 LTR ERVL 585 chr13_NT_462289v1_random 4214 4281 (T)n 913 + 4214 4281 0 2 17,25, 0,42, +,+, 176781 Simple_repeat Simple_repeat 585 chr13_NT_462297v1_random 3655 3924 GGLTR5A 531 - 3655 3924 0 2 92,174, 0,95, -,-, 176799 LTR ERVL 585 chr13_NT_462311v1_random 1042 1453 (ACCCATTGGG)n 433 - 1042 1453 0 3 115,112,122, 0,127,289, -,-,-, 176829 Satellite Satellite 585 chr13_NT_462311v1_random 1647 2154 (ACCCATTGGG)n 478 - 1647 2154 0 4 112,116,114,117, 0,124,251,390, -,-,-,-, 176830 Satellite Satellite 585 chr14 10952 12667 CR1-G 528 + 10952 12667 0 3 599,157,388, 0,852,1327, +,+,+, 176876 LINE CR1 585 chr14 13946 16849 GGLTR10C1 811 - 13946 16849 0 4 362,1912,264,363, 0,362,2276,2540, -,-,-,-, 176880 LTR ERVK 585 chr14 17883 19858 CR1-C 597 + 17883 19858 0 2 423,817, 0,1158, +,+, 176882 LINE CR1 586 chr14 154112 154202 (T)n 863 + 154112 154202 0 2 47,19, 0,71, +,+, 176972 Simple_repeat Simple_repeat 586 chr14 190879 191466 GGLTR5B 508 + 190879 191466 0 2 375,168, 0,419, +,+, 177003 LTR ERVL 587 chr14 347365 347910 GGERVL18-int 520 - 347365 347910 0 2 346,198, 0,347, -,-, 177079 LTR ERVL 588 chr14 420881 421226 CR1-D2 741 + 420881 421226 0 2 89,256, 0,89, +,+, 177119 LINE CR1 588 chr14 441007 441461 Char12Mar1_GG 625 - 441007 441461 0 2 241,182, 0,272, -,-, 177125 DNA hAT-Charlie 589 chr14 539076 539565 CR1-Y2_Aves 131 + 539076 539565 0 2 200,119, 0,370, +,+, 177176 LINE CR1 589 chr14 581414 581658 GGLTR9 458 - 581414 581658 0 2 120,113, 0,131, -,-, 177199 LTR ERVL 589 chr14 587662 588138 TguLTR5e 198 - 587662 588138 0 2 146,232, 0,244, -,-, 177204 LTR ERVL 589 chr14 604054 604399 GGLTR3C1 221 - 604054 604399 0 3 36,100,181, 0,52,164, -,-,-, 177213 LTR ERVL 590 chr14 708832 709681 CR1-H2 884 - 708832 709681 0 2 455,98, 0,751, -,-, 177266 LINE CR1 591 chr14 892050 892240 Char12Mar1_GG 690 - 892050 892240 0 2 123,67, 0,123, -,-, 177361 DNA hAT-Charlie 592 chr14 959129 959245 (CCGCC)n 326 + 959129 959245 0 2 9,14, 0,102, +,+, 177386 Simple_repeat Simple_repeat 594 chr14 1275909 1284545 CR1-H 557 + 1275909 1284545 0 2 103,112, 0,8524, +,+, 177480 LINE CR1 594 chr14 1290427 1290958 CR1-L3B_Croc 168 - 1290427 1290958 0 2 125,337, 0,194, -,-, 177482 LINE CR1 595 chr14 1327667 1327747 (TTTATT)n 324 + 1327667 1327747 0 2 12,18, 0,62, +,+, 177498 Simple_repeat Simple_repeat 597 chr14 1691473 1692756 CR1-L3B_Croc 235 + 1691473 1692756 0 2 367,399, 0,884, +,+, 177591 LINE CR1 598 chr14 1814755 1819332 GGERV10_LTR 990 - 1814755 1819332 0 4 220,2261,1872,223, 0,220,2481,4354, -,-,-,-, 177630 LTR ERVL 599 chr14 1866902 1867681 CR1-D2 229 + 1866902 1867681 0 2 70,460, 0,319, +,+, 177648 LINE CR1 599 chr14 1899010 1899520 CR1-D2 555 - 1899010 1899520 0 2 308,197, 0,313, -,-, 177656 LINE CR1 600 chr14 2038004 2039138 X9_LINE 341 - 2038004 2039138 0 2 251,169, 0,965, -,-, 177712 LINE L1 603 chr14 2402983 2403110 (AACA)n 334 + 2402983 2403110 0 2 79,22, 0,105, +,+, 177828 Simple_repeat Simple_repeat 604 chr14 2604767 2604881 G-rich 589 + 2604767 2604881 0 2 48,29, 0,85, +,+, 177927 Low_complexity Low_complexity 606 chr14 2824287 2824437 CR1-F2 514 + 2824287 2824437 0 2 55,82, 0,68, +,+, 178023 LINE CR1 607 chr14 2889301 2890232 CR1-L3B_Croc 121 + 2889301 2890232 0 2 214,477, 0,454, +,+, 178035 LINE CR1 607 chr14 3002163 3002589 CR1-D 755 + 3002163 3002589 0 2 255,171, 0,255, +,+, 178065 LINE CR1 608 chr14 3084757 3084840 (CAGCGCC)n 310 + 3084757 3084840 0 2 10,8, 0,75, +,+, 178089 Simple_repeat Simple_repeat 609 chr14 3191471 3192436 CR1-L3A_Croc 261 + 3191471 3192436 0 2 253,108, 0,857, +,+, 178120 LINE CR1 612 chr14 3583966 3584467 TguLTR5e 220 + 3583966 3584467 0 2 244,216, 0,285, +,+, 178258 LTR ERVL 612 chr14 3641261 3641331 (AAC)n 376 + 3641261 3641331 0 2 6,17, 0,53, +,+, 178279 Simple_repeat Simple_repeat 613 chr14 3710699 3710983 Char12Mar1_GG 611 - 3710699 3710983 0 2 219,65, 0,219, -,-, 178294 DNA hAT-Charlie 613 chr14 3736835 3736872 (TTATAA)n 498 + 3736835 3736872 0 2 6,10, 0,27, +,+, 178310 Simple_repeat Simple_repeat 614 chr14 3884621 3884684 (CTCC)n 318 + 3884621 3884684 0 2 10,20, 0,43, +,+, 178360 Simple_repeat Simple_repeat 616 chr14 4149170 4149247 (T)n 784 + 4149170 4149247 0 2 27,25, 0,52, +,+, 178470 Simple_repeat Simple_repeat 620 chr14 4610817 4614526 CR1-X2 473 - 4610817 4614526 0 2 86,232, 0,3477, -,-, 178690 LINE CR1 620 chr14 4615689 4616171 CR1-B2 573 + 4615689 4616171 0 2 431,51, 0,431, +,+, 178691 LINE CR1 620 chr14 4674351 4674472 CR1-X2 585 + 4674351 4674472 0 2 64,57, 0,64, +,+, 178716 LINE CR1 621 chr14 4835286 4838039 CR1-C4 602 + 4835286 4838039 0 2 163,131, 0,2622, +,+, 178807 LINE CR1 77 chr14 4849322 4850448 CR1-L3B_Croc 246 - 4849322 4850448 0 2 168,190, 0,936, -,-, 178808 LINE CR1 622 chr14 4902773 4902915 (CATG)n 204 + 4902773 4902915 0 2 8,9, 0,133, +,+, 178858 Simple_repeat Simple_repeat 622 chr14 4905249 4905441 CR1-F2 490 + 4905249 4905441 0 2 87,105, 0,87, +,+, 178863 LINE CR1 622 chr14 4925765 4926474 (CAATG)n 374 + 4925765 4926474 0 3 148,55,327, 0,327,382, +,+,+, 178881 Simple_repeat Simple_repeat 623 chr14 4983587 4984065 CR1-D2 555 + 4983587 4984065 0 2 255,223, 0,255, +,+, 178920 LINE CR1 623 chr14 5083629 5083710 (GGAGCG)n 352 + 5083629 5083710 0 2 12,15, 0,66, +,+, 178966 Simple_repeat Simple_repeat 624 chr14 5164666 5165066 CR1-C4 535 + 5164666 5165066 0 2 300,98, 0,302, +,+, 178994 LINE CR1 624 chr14 5224644 5224881 Char12Mar1_GG 607 - 5224644 5224881 0 2 126,108, 0,129, -,-, 179020 DNA hAT-Charlie 625 chr14 5254810 5256401 GGERVL18-int 570 - 5254810 5256401 0 2 334,1257, 0,334, -,-, 179024 LTR ERVL 625 chr14 5256389 5256831 GGERV20_I-int 321 - 5256389 5256831 0 2 93,182, 0,260, -,-, 179025 LTR ERVL 625 chr14 5283088 5283169 (TTTCT)n 322 + 5283088 5283169 0 2 19,29, 0,52, +,+, 179045 Simple_repeat Simple_repeat 627 chr14 5633878 5634071 CR1-F2 547 - 5633878 5634071 0 2 61,132, 0,61, -,-, 179197 LINE CR1 630 chr14 5927045 5927715 CR1-Y4 473 - 5927045 5927715 0 2 236,350, 0,320, -,-, 179318 LINE CR1 630 chr14 5931401 5932327 CR1-C4 434 - 5931401 5932327 0 2 105,373, 0,553, -,-, 179321 LINE CR1 630 chr14 6011053 6012727 CR1-C4 508 + 6011053 6012727 0 2 129,47, 0,1627, +,+, 179369 LINE CR1 630 chr14 6012965 6013347 CR1-Y4 267 + 6012965 6013347 0 2 227,155, 0,227, +,+, 179374 LINE CR1 632 chr14 6219248 6219779 CR1-C4 647 - 6219248 6219779 0 2 42,489, 0,42, -,-, 179457 LINE CR1 635 chr14 6656036 6656254 GGLTR4B 650 + 6656036 6656254 0 2 126,92, 0,126, +,+, 179622 LTR ERVL 635 chr14 6656276 6656798 GGERVL18-int 523 + 6656276 6656798 0 2 189,333, 0,189, +,+, 179623 LTR ERVL 636 chr14 6720246 6720777 CR1-Y4 422 + 6720246 6720777 0 2 440,91, 0,440, +,+, 179641 LINE CR1 636 chr14 6722426 6722724 CR1-Y4 367 - 6722426 6722724 0 2 98,200, 0,98, -,-, 179643 LINE CR1 636 chr14 6798353 6798684 CR1-Y4 528 + 6798353 6798684 0 2 221,110, 0,221, +,+, 179681 LINE CR1 639 chr14 7189927 7190016 A-rich 366 + 7189927 7190016 0 2 18,49, 0,40, +,+, 179818 Low_complexity Low_complexity 640 chr14 7232918 7234179 TguLTR5d 322 + 7232918 7234179 0 2 156,92, 0,1169, +,+, 179835 LTR ERVL 640 chr14 7243566 7244905 CR1-L3A_Croc 155 - 7243566 7244905 0 3 502,315,338, 0,675,1001, -,-,-, 179839 LINE CR1 641 chr14 7389578 7390584 CR1-E 711 + 7389578 7390584 0 2 394,612, 0,394, +,+, 179895 LINE CR1 642 chr14 7481728 7481973 CR1-X2 493 + 7481728 7481973 0 2 199,46, 0,199, +,+, 179933 LINE CR1 642 chr14 7498608 7499492 CR1-Y2_Aves 306 - 7498608 7499492 0 2 122,430, 0,454, -,-, 179943 LINE CR1 642 chr14 7515630 7516034 GGLTR4B 634 - 7515630 7516034 0 2 114,240, 0,164, -,-, 179950 LTR ERVL 642 chr14 7552911 7553750 CR1-C3 662 + 7552911 7553750 0 2 566,270, 0,569, +,+, 179971 LINE CR1 649 chr14 8465631 8465683 (TTTC)n 404 + 8465631 8465683 0 2 13,16, 0,36, +,+, 180218 Simple_repeat Simple_repeat 650 chr14 8571360 8571815 CR1-F2 451 - 8571360 8571815 0 2 236,197, 0,258, -,-, 180260 LINE CR1 653 chr14 9024797 9025082 CR1-X2 447 + 9024797 9025082 0 2 142,143, 0,142, +,+, 180413 LINE CR1 654 chr14 9075148 9075661 GGLTR8B 169 + 9075148 9075661 0 2 265,170, 0,343, +,+, 180433 LTR ERVL 656 chr14 9316558 9316843 Char12Mar1_GG 672 - 9316558 9316843 0 2 125,160, 0,125, -,-, 180518 DNA hAT-Charlie 657 chr14 9468350 9468581 CR1-X1 539 - 9468350 9468581 0 2 54,86, 0,145, -,-, 180558 LINE CR1 657 chr14 9486143 9486778 CR1-Y2_Aves 254 + 9486143 9486778 0 2 156,116, 0,519, +,+, 180564 LINE CR1 657 chr14 9527488 9529555 CR1-C3 705 + 9527488 9529555 0 2 148,67, 0,2000, +,+, 180585 LINE CR1 657 chr14 9545784 9547182 CR1-D2 544 - 9545784 9547182 0 2 879,519, 0,879, -,-, 180598 LINE CR1 658 chr14 9583349 9583933 CR1-F2 444 + 9583349 9583933 0 2 156,382, 0,202, +,+, 180612 LINE CR1 658 chr14 9620074 9620168 (TTTCC)n 400 + 9620074 9620168 0 2 28,21, 0,73, +,+, 180630 Simple_repeat Simple_repeat 659 chr14 9754927 9755469 GGLTR8B 530 - 9754927 9755469 0 2 467,75, 0,467, -,-, 180691 LTR ERVL 659 chr14 9776302 9777010 CR1-Y2_Aves 332 + 9776302 9777010 0 2 322,73, 0,635, +,+, 180696 LINE CR1 661 chr14 10000415 10002750 CR1-D 468 + 10000415 10002750 0 2 1044,1279, 0,1056, +,+, 180770 LINE CR1 661 chr14 10051478 10051826 GGLTR8B 401 - 10051478 10051826 0 2 206,87, 0,261, -,-, 180790 LTR ERVL 662 chr14 10110550 10111102 CR1-C 818 + 10110550 10111102 0 2 58,494, 0,58, +,+, 180815 LINE CR1 662 chr14 10215856 10218331 GGERVK1-int 980 - 10215856 10218331 0 3 241,446,1787, 0,242,688, -,-,-, 180850 LTR ERVK 663 chr14 10325012 10325466 Char12Mar1_GG 586 - 10325012 10325466 0 2 220,125, 0,329, -,-, 180891 DNA hAT-Charlie 663 chr14 10328037 10328466 CR1-Y2_Aves 327 - 10328037 10328466 0 2 101,93, 0,336, -,-, 180895 LINE CR1 664 chr14 10361909 10362214 Char12Mar1_GG 673 - 10361909 10362214 0 2 101,202, 0,103, -,-, 180910 DNA hAT-Charlie 664 chr14 10402886 10403658 CR1-C4 641 - 10402886 10403658 0 2 407,365, 0,407, -,-, 180924 LINE CR1 664 chr14 10419737 10420198 GGLTR5B 569 - 10419737 10420198 0 2 284,177, 0,284, -,-, 180932 LTR ERVL 665 chr14 10520819 10520871 A-rich 560 + 10520819 10520871 0 2 11,17, 0,35, +,+, 180979 Low_complexity Low_complexity 666 chr14 10621851 10622330 GGLTR8A 305 - 10621851 10622330 0 2 86,121, 0,358, -,-, 181034 LTR ERVL 667 chr14 10863524 10864255 UCON27 268 - 10863524 10864255 0 2 345,114, 0,617, -,-, 181156 Unknown Unknown 670 chr14 11141187 11141513 GGLTR5B 333 + 11141187 11141513 0 2 213,112, 0,214, +,+, 181320 LTR ERVL 670 chr14 11148367 11149492 CR1-Y1_Aves 360 + 11148367 11149492 0 2 1018,107, 0,1018, +,+, 181326 LINE CR1 670 chr14 11162434 11163612 CR1-D2 537 - 11162434 11163612 0 2 1027,151, 0,1027, -,-, 181330 LINE CR1 670 chr14 11196630 11197073 CR1-Y2_Aves 297 + 11196630 11197073 0 2 319,124, 0,319, +,+, 181341 LINE CR1 670 chr14 11262002 11262845 CR1-C3 570 - 11262002 11262845 0 2 216,626, 0,217, -,-, 181383 LINE CR1 671 chr14 11313381 11313777 CR1-Y1_Aves 344 + 11313381 11313777 0 2 89,87, 0,309, +,+, 181420 LINE CR1 671 chr14 11340630 11340902 Mariner1b_GG 511 - 11340630 11340902 0 2 185,87, 0,185, -,-, 181436 DNA TcMar-Mariner 671 chr14 11354649 11355037 GGLTR5B 127 - 11354649 11355037 0 2 217,143, 0,245, -,-, 181443 LTR ERVL 671 chr14 11373267 11373721 TguLTR5e 308 + 11373267 11373721 0 2 266,159, 0,295, +,+, 181451 LTR ERVL 672 chr14 11418662 11419139 TguLTR5e 347 + 11418662 11419139 0 2 244,152, 0,325, +,+, 181478 LTR ERVL 672 chr14 11486951 11488749 CR1-X1 481 - 11486951 11488749 0 2 93,192, 0,1606, -,-, 181507 LINE CR1 672 chr14 11490703 11492550 GGERVL18-int 578 - 11490703 11492550 0 2 323,1524, 0,323, -,-, 181510 LTR ERVL 672 chr14 11495779 11496139 CR1-X1 428 - 11495779 11496139 0 2 238,106, 0,254, -,-, 181516 LINE CR1 672 chr14 11497931 11498817 CR1-Y4 553 + 11497931 11498817 0 3 231,382,273, 0,231,613, +,+,+, 181517 LINE CR1 672 chr14 11503694 11503759 (GCAC)n 440 + 11503694 11503759 0 2 23,6, 0,59, +,+, 181520 Simple_repeat Simple_repeat 673 chr14 11632724 11633109 GGLTR5A 375 - 11632724 11633109 0 2 85,262, 0,123, -,-, 181565 LTR ERVL 673 chr14 11644509 11644894 GGLTR8B 297 + 11644509 11644894 0 2 147,163, 0,222, +,+, 181570 LTR ERVL 673 chr14 11651022 11651352 CR1-C4 486 - 11651022 11651352 0 2 210,120, 0,210, -,-, 181575 LINE CR1 674 chr14 11766040 11767087 Char12Mar1_GG 537 - 11766040 11767087 0 2 686,346, 0,701, -,-, 181629 DNA hAT-Charlie 675 chr14 11867581 11868115 CR1-X2 529 - 11867581 11868115 0 2 215,319, 0,215, -,-, 181671 LINE CR1 675 chr14 11871411 11872218 CR1-C4 587 + 11871411 11872218 0 2 499,306, 0,501, +,+, 181676 LINE CR1 678 chr14 12207283 12207911 CR1-X 480 + 12207283 12207911 0 3 97,380,151, 0,97,477, +,+,+, 181788 LINE CR1 679 chr14 12450039 12450123 (GCG)n 360 + 12450039 12450123 0 2 33,23, 0,61, +,+, 181890 Simple_repeat Simple_repeat 680 chr14 12544891 12544992 (T)n 811 + 12544891 12544992 0 2 30,28, 0,73, +,+, 181918 Simple_repeat Simple_repeat 682 chr14 12739531 12739903 (CATCC)n 508 + 12739531 12739903 0 2 161,30, 0,342, +,+, 182003 Simple_repeat Simple_repeat 682 chr14 12740775 12741497 (CATCC)n 452 + 12740775 12741497 0 2 115,594, 0,128, +,+, 182011 Simple_repeat Simple_repeat 682 chr14 12743131 12743506 (CATCC)n 470 + 12743131 12743506 0 2 164,30, 0,345, +,+, 182018 Simple_repeat Simple_repeat 683 chr14 12913979 12914173 CR1-X2 593 - 12913979 12914173 0 2 103,41, 0,153, -,-, 182099 LINE CR1 685 chr14 13153230 13153388 G-rich 379 + 13153230 13153388 0 2 94,52, 0,106, +,+, 182221 Low_complexity Low_complexity 686 chr14 13343232 13343576 (CATGC)n 391 + 13343232 13343576 0 2 114,230, 0,114, +,+, 182320 Simple_repeat Simple_repeat 689 chr14 13663756 13664214 Charlie12_GG 350 + 13663756 13664214 0 2 241,187, 0,271, +,+, 182495 DNA hAT-Charlie 689 chr14 13675088 13675541 Char12Mar1_GG 332 + 13675088 13675541 0 2 238,187, 0,266, +,+, 182504 DNA hAT-Charlie 689 chr14 13683907 13684404 CR1-X1 490 - 13683907 13684404 0 2 88,391, 0,106, -,-, 182511 LINE CR1 689 chr14 13700987 13701224 CR1-D2 486 - 13700987 13701224 0 2 79,134, 0,103, -,-, 182516 LINE CR1 689 chr14 13724681 13725737 CR1-Y1_Aves 491 + 13724681 13725737 0 2 370,391, 0,665, +,+, 182532 LINE CR1 689 chr14 13725811 13727115 CR1-C4 514 + 13725811 13727115 0 2 834,470, 0,834, +,+, 182534 LINE CR1 690 chr14 13768877 13769538 CR1-H 710 + 13768877 13769538 0 2 42,619, 0,42, +,+, 182554 LINE CR1 690 chr14 13770352 13772593 GGERVL18-int 469 - 13770352 13772593 0 4 198,659,885,80, 0,198,858,2161, -,-,-,-, 182556 LTR ERVL 690 chr14 13787512 13788673 CR1-Y4 613 - 13787512 13788673 0 2 524,633, 0,528, -,-, 182569 LINE CR1 690 chr14 13828432 13828954 CR1-F2 317 + 13828432 13828954 0 2 191,331, 0,191, +,+, 182589 LINE CR1 691 chr14 13897367 13897432 (AGAGCC)n 372 + 13897367 13897432 0 2 17,14, 0,51, +,+, 182619 Simple_repeat Simple_repeat 692 chr14 14072054 14073203 CR1-Y4 384 - 14072054 14073203 0 2 318,592, 0,557, -,-, 182709 LINE CR1 692 chr14 14112143 14113080 CR1-C4 633 + 14112143 14113080 0 2 718,207, 0,730, +,+, 182736 LINE CR1 692 chr14 14154033 14155351 CR1-L3B_Croc 285 + 14154033 14155351 0 3 112,273,76, 0,710,1242, +,+,+, 182762 LINE CR1 693 chr14 14187353 14187795 CR1-F2 640 + 14187353 14187795 0 2 254,183, 0,259, +,+, 182779 LINE CR1 693 chr14 14217218 14218008 CR1-D2 587 + 14217218 14218008 0 2 503,287, 0,503, +,+, 182797 LINE CR1 693 chr14 14241064 14241132 GA-rich 292 + 14241064 14241132 0 2 22,11, 0,57, +,+, 182809 Low_complexity Low_complexity 694 chr14 14301807 14302220 CR1-D2 392 + 14301807 14302220 0 2 79,333, 0,80, +,+, 182835 LINE CR1 694 chr14 14310319 14313677 GGERVL18-int 645 - 14310319 14313677 0 3 329,2299,728, 0,331,2630, -,-,-, 182844 LTR ERVL 694 chr14 14395602 14403808 CR1-F2 343 - 14395602 14403808 0 3 364,178,570, 0,7400,7636, -,-,-, 182886 LINE CR1 694 chr14 14416771 14416875 (CTCTCCC)n 270 + 14416771 14416875 0 2 28,17, 0,87, +,+, 182892 Simple_repeat Simple_repeat 695 chr14 14485270 14485329 (CAA)n 552 + 14485270 14485329 0 2 20,11, 0,48, +,+, 182929 Simple_repeat Simple_repeat 695 chr14 14508156 14508323 CR1-C2 891 - 14508156 14508323 0 2 36,131, 0,36, -,-, 182944 LINE CR1 695 chr14 14523260 14523917 CR1-E 821 + 14523260 14523917 0 2 204,135, 0,522, +,+, 182955 LINE CR1 696 chr14 14609637 14613424 GGERVL18-LTR 751 - 14609637 14613424 0 2 3461,326, 0,3461, -,-, 183007 LTR ERVL 697 chr14 14685562 14685612 (TATG)n 362 + 14685562 14685612 0 2 18,6, 0,44, +,+, 183036 Simple_repeat Simple_repeat 697 chr14 14689603 14689880 Char12Mar1_GG 744 - 14689603 14689880 0 2 172,102, 0,175, -,-, 183042 DNA hAT-Charlie 697 chr14 14716506 14717081 GGLTR5B 326 - 14716506 14717081 0 2 147,385, 0,190, -,-, 183059 LTR ERVL 697 chr14 14755344 14756438 CR1-F2 333 + 14755344 14756438 0 2 245,459, 0,635, +,+, 183083 LINE CR1 697 chr14 14755581 14755976 CR1-Y4 641 + 14755581 14755976 0 2 95,300, 0,95, +,+, 183084 LINE CR1 697 chr14 14778006 14778926 GGLTR3C1 742 + 14778006 14778926 0 2 490,62, 0,858, +,+, 183099 LTR ERVL 697 chr14 14785027 14787915 CR1-H 697 + 14785027 14787915 0 2 1145,1743, 0,1145, +,+, 183102 LINE CR1 697 chr14 14796021 14797014 CR1-C 689 + 14796021 14797014 0 2 415,85, 0,908, +,+, 183109 LINE CR1 697 chr14 14804967 14805935 CR1-C 594 + 14804967 14805935 0 2 403,82, 0,886, +,+, 183120 LINE CR1 698 chr14 14825306 14826851 CR1-C4 481 - 14825306 14826851 0 2 216,477, 0,1068, -,-, 183138 LINE CR1 699 chr14 14955653 14956081 Char12Mar1_GG 571 - 14955653 14956081 0 2 298,128, 0,300, -,-, 183185 DNA hAT-Charlie 699 chr14 14987073 14988505 CR1-C3 587 + 14987073 14988505 0 2 538,250, 0,1182, +,+, 183205 LINE CR1 699 chr14 15013435 15015224 CR1-E 688 - 15013435 15015224 0 3 236,1150,382, 0,257,1407, -,-,-, 183221 LINE CR1 699 chr14 15021386 15021703 (CTCTATGGGG)n 488 + 15021386 15021703 0 2 180,115, 0,202, +,+, 183237 Satellite Satellite 699 chr14 15033911 15034217 (GCCCCACAGCT)n 371 - 15033911 15034217 0 2 139,139, 0,167, -,-, 183258 Satellite Satellite 703 chr14 15546296 15546870 ENS3-int 305 - 15546296 15546870 0 2 101,448, 0,126, -,-, 183269 LTR ERVL 703 chr14 15549738 15551707 GGERV28_I-int 181 + 15549738 15551707 0 2 223,328, 0,1641, +,+, 183270 LTR ERVK 703 chr14 15556601 15557098 (CAAGG)n 554 + 15556601 15557098 0 2 219,100, 0,397, +,+, 183280 Simple_repeat Simple_repeat 703 chr14 15557912 15558324 (CAGGC)n 522 + 15557912 15558324 0 2 219,193, 0,219, +,+, 183286 Simple_repeat Simple_repeat 703 chr14 15558387 15559046 (CAGGC)n 578 + 15558387 15559046 0 2 153,232, 0,427, +,+, 183288 Simple_repeat Simple_repeat 703 chr14 15560423 15561172 (CAGGC)n 488 + 15560423 15561172 0 2 370,30, 0,719, +,+, 183302 Simple_repeat Simple_repeat 703 chr14 15562333 15563054 (CAGGC)n 494 + 15562333 15563054 0 4 72,17,52,36, 0,255,453,685, +,+,+,+, 183316 Simple_repeat Simple_repeat 703 chr14 15563684 15564085 (CAGGC)n 517 + 15563684 15564085 0 2 215,186, 0,215, +,+, 183326 Simple_repeat Simple_repeat 703 chr14 15564003 15564377 (CAAGG)n 527 + 15564003 15564377 0 2 176,198, 0,176, +,+, 183327 Simple_repeat Simple_repeat 703 chr14 15565017 15565603 (CAGGC)n 461 + 15565017 15565603 0 3 220,208,142, 0,220,444, +,+,+, 183334 Simple_repeat Simple_repeat 703 chr14 15565735 15566095 (CAGGC)n 518 + 15565735 15566095 0 2 123,45, 0,315, +,+, 183336 Simple_repeat Simple_repeat 703 chr14 15566236 15567805 (CAGGC)n 503 + 15566236 15567805 0 6 170,56,161,44,371,246, 0,482,538,892,952,1323, +,+,+,+,+,+, 183341 Simple_repeat Simple_repeat 703 chr14 15567765 15568364 (CAAGG)n 562 + 15567765 15568364 0 2 265,156, 0,443, +,+, 183344 Simple_repeat Simple_repeat 703 chr14 15568232 15568839 (CAGGC)n 530 + 15568232 15568839 0 3 217,69,245, 0,233,362, +,+,+, 183346 Simple_repeat Simple_repeat 703 chr14 15569055 15569702 (CAGGC)n 564 + 15569055 15569702 0 3 192,62,216, 0,369,431, +,+,+, 183348 Simple_repeat Simple_repeat 703 chr14 15570095 15570954 (CAGGC)n 474 + 15570095 15570954 0 3 424,162,50, 0,464,809, +,+,+, 183353 Simple_repeat Simple_repeat 703 chr14 15571030 15572309 (CAGGC)n 569 + 15571030 15572309 0 6 340,179,114,176,65,240, 0,356,535,655,974,1039, +,+,+,+,+,+, 183357 Simple_repeat Simple_repeat 703 chr14 15572245 15573584 (CAAGG)n 550 + 15572245 15573584 0 5 134,47,153,94,523, 0,315,366,676,816, +,+,+,+,+, 183359 Simple_repeat Simple_repeat 703 chr14 15579021 15579891 (CCTCG)n 618 + 15579021 15579891 0 2 278,364, 0,506, +,+, 183381 Simple_repeat Simple_repeat 703 chr14 15581199 15584168 GGXHOI 412 + 15581199 15584168 0 2 2448,508, 0,2461, +,+, 183387 Satellite W-chromosome 703 chr14 15584251 15584902 GGXHOI 296 + 15584251 15584902 0 2 231,405, 0,246, +,+, 183388 Satellite W-chromosome 703 chr14 15585188 15585905 GGXHOI 328 + 15585188 15585905 0 2 303,365, 0,352, +,+, 183389 Satellite W-chromosome 703 chr14 15586209 15587757 GGXHOI 419 + 15586209 15587757 0 2 900,619, 0,929, +,+, 183390 Satellite W-chromosome 703 chr14 15587873 15594984 GGXHOI 399 + 15587873 15594984 0 4 143,391,5226,1260, 0,164,603,5851, +,+,+,+, 183391 Satellite W-chromosome 585 chr14_NT_462349v1_random 20320 21235 CR1-11_Crp 214 - 20320 21235 0 2 338,117, 0,798, -,-, 183409 LINE CR1 585 chr14_NT_462349v1_random 26050 26441 CR1-X2 636 - 26050 26441 0 2 198,190, 0,201, -,-, 183412 LINE CR1 585 chr14_NT_462350v1_random 3714 4707 CR1-C 687 + 3714 4707 0 2 415,85, 0,908, +,+, 183444 LINE CR1 585 chr14_NT_462350v1_random 12711 13704 CR1-C 689 + 12711 13704 0 2 415,85, 0,908, +,+, 183456 LINE CR1 585 chr14_NT_462350v1_random 21708 22701 CR1-C 689 + 21708 22701 0 2 415,85, 0,908, +,+, 183468 LINE CR1 585 chr14_NT_462350v1_random 24373 25190 CR1-C 658 + 24373 25190 0 2 244,85, 0,732, +,+, 183474 LINE CR1 585 chr14_NT_462350v1_random 47027 48440 CR1-C4 462 - 47027 48440 0 2 216,467, 0,946, -,-, 183499 LINE CR1 585 chr14_NT_462351v1_random 7911 9276 CR1-F2 679 - 7911 9276 0 2 1320,11, 0,1354, -,-, 183505 LINE CR1 585 chr14_NT_462351v1_random 20446 21811 CR1-F2 679 - 20446 21811 0 2 1320,11, 0,1354, -,-, 183518 LINE CR1 585 chr14_NT_462352v1_random 16584 18560 CR1-C 588 - 16584 18560 0 2 837,423, 0,1553, -,-, 183549 LINE CR1 585 chr14_NT_462352v1_random 20117 21227 CR1-Y1_Aves 246 + 20117 21227 0 3 70,12,366, 0,712,744, +,+,+, 183553 LINE CR1 585 chr14_NT_462352v1_random 21238 22953 CR1-G 525 - 21238 22953 0 3 388,157,599, 0,706,1116, -,-,-, 183555 LINE CR1 585 chr14_NT_462353v1_random 8114 10089 CR1-C 593 - 8114 10089 0 2 837,423, 0,1552, -,-, 183566 LINE CR1 585 chr14_NT_462353v1_random 11129 14526 GGLTR10C1 893 + 11129 14526 0 3 363,2675,359, 0,363,3038, +,+,+, 183570 LTR ERVK 585 chr14_NT_462353v1_random 14684 15794 CR1-Y1_Aves 251 + 14684 15794 0 3 70,12,366, 0,712,744, +,+,+, 183571 LINE CR1 585 chr14_NT_462353v1_random 15805 17528 CR1-G 524 - 15805 17528 0 3 388,157,608, 0,705,1115, -,-,-, 183573 LINE CR1 585 chr14_NT_462354v1_random 6252 12065 GGLTR3F1 891 - 6252 12065 0 2 5318,494, 0,5319, -,-, 183580 LTR ERVL 585 chr14_NT_462355v1_random 290 396 (C)n 861 + 290 396 0 2 32,52, 0,54, +,+, 183590 Simple_repeat Simple_repeat 585 chr14_NT_462355v1_random 12303 24832 Char12Mar1_GG 324 - 12303 24832 0 2 192,183, 0,12346, -,-, 183600 DNA hAT-Charlie 585 chr14_NT_462356v1_random 17449 18808 CR1-F2 679 - 17449 18808 0 2 1320,11, 0,1348, -,-, 183626 LINE CR1 585 chr14_NT_462357v1_random 12230 12727 CR1-X1 488 - 12230 12727 0 2 88,391, 0,106, -,-, 183646 LINE CR1 585 chr14_NT_462358v1_random 6175 6672 CR1-X1 490 + 6175 6672 0 2 391,88, 0,409, +,+, 183659 LINE CR1 585 chr14_NT_462358v1_random 15046 15499 Charlie12_GG 336 - 15046 15499 0 2 187,238, 0,215, -,-, 183665 DNA hAT-Charlie 585 chr14_NT_462358v1_random 21564 22068 CR1-X1 446 + 21564 22068 0 2 392,100, 0,404, +,+, 183672 LINE CR1 585 chr14_NT_462359v1_random 3753 4208 Charlie12_GG 336 + 3753 4208 0 2 238,187, 0,268, +,+, 183676 DNA hAT-Charlie 585 chr14_NT_462359v1_random 12482 12979 CR1-X1 499 - 12482 12979 0 2 88,391, 0,106, -,-, 183683 LINE CR1 585 chr14_NT_462359v1_random 19042 19505 Charlie12_GG 336 + 19042 19505 0 2 238,187, 0,276, +,+, 183687 DNA hAT-Charlie 585 chr14_NT_462360v1_random 4513 5506 CR1-C 689 + 4513 5506 0 2 415,85, 0,908, +,+, 183695 LINE CR1 585 chr14_NT_462360v1_random 13511 14504 CR1-C 689 + 13511 14504 0 2 415,85, 0,908, +,+, 183707 LINE CR1 585 chr14_NT_462361v1_random 4152 5517 CR1-F2 679 + 4152 5517 0 2 11,1320, 0,45, +,+, 183723 LINE CR1 585 chr14_NT_462364v1_random 15625 15818 GGLTR4B 587 + 15625 15818 0 2 77,75, 0,118, +,+, 183777 LTR ERVL 585 chr14_NT_462364v1_random 16573 17453 CR1-F2 437 - 16573 17453 0 3 191,321,217, 0,342,663, -,-,-, 183779 LINE CR1 585 chr14_NT_462365v1_random 10099 11083 CR1-C 673 - 10099 11083 0 2 85,408, 0,576, -,-, 183795 LINE CR1 585 chr14_NT_462379v1_random 9446 9691 CR1-X2 493 + 9446 9691 0 2 199,46, 0,199, +,+, 183857 LINE CR1 585 chr14_NT_462412v1_random 4494 4563 (AAC)n 368 + 4494 4563 0 2 6,17, 0,52, +,+, 183954 Simple_repeat Simple_repeat 585 chr15 108146 110489 CR1-E 535 + 108146 110489 0 3 55,460,860, 0,1023,1483, +,+,+, 184106 LINE CR1 585 chr15 108194 109171 CR1-B2 738 + 108194 109171 0 2 52,918, 0,59, +,+, 184107 LINE CR1 587 chr15 366260 366418 GGLTR4B 781 - 366260 366418 0 2 66,92, 0,66, -,-, 184236 LTR ERVL 588 chr15 429420 429489 (CAGCAGG)n 404 + 429420 429489 0 2 6,17, 0,52, +,+, 184273 Simple_repeat Simple_repeat 589 chr15 544339 544809 CR1-G 674 - 544339 544809 0 2 96,38, 0,432, -,-, 184318 LINE CR1 592 chr15 1018510 1018946 Char12Mar1_GG 722 - 1018510 1018946 0 2 202,228, 0,208, -,-, 184487 DNA hAT-Charlie 593 chr15 1134804 1135146 Char12Mar1_GG 577 - 1134804 1135146 0 2 303,39, 0,303, -,-, 184514 DNA hAT-Charlie 596 chr15 1539641 1539872 Char12Mar1_GG 736 - 1539641 1539872 0 2 68,163, 0,68, -,-, 184618 DNA hAT-Charlie 598 chr15 1803135 1803806 CR1-X2 561 + 1803135 1803806 0 2 200,282, 0,389, +,+, 184710 LINE CR1 600 chr15 2041369 2045519 CR1-F2 437 + 2041369 2045519 0 2 254,72, 0,4078, +,+, 184786 LINE CR1 609 chr15 3179803 3180104 GGLTR4A 744 + 3179803 3180104 0 2 93,188, 0,113, +,+, 185120 LTR ERVL 611 chr15 3459503 3459553 (CCCCTC)n 512 + 3459503 3459553 0 2 7,8, 0,42, +,+, 185244 Simple_repeat Simple_repeat 612 chr15 3578881 3579051 GGLTR9 599 + 3578881 3579051 0 2 38,132, 0,38, +,+, 185273 LTR ERVL 616 chr15 4123933 4123972 (TCTT)n 488 + 4123933 4123972 0 2 10,11, 0,28, +,+, 185429 Simple_repeat Simple_repeat 617 chr15 4264865 4270692 GGERV10_LTR 983 + 4264865 4270692 0 3 220,5386,220, 0,221,5607, +,+,+, 185464 LTR ERVL 617 chr15 4285489 4285767 Char12Mar1_GG 593 - 4285489 4285767 0 2 49,229, 0,49, -,-, 185469 DNA hAT-Charlie 619 chr15 4489000 4489281 Char12Mar1_GG 759 - 4489000 4489281 0 2 136,145, 0,136, -,-, 185564 DNA hAT-Charlie 619 chr15 4542947 4543133 GGLTR8A 600 - 4542947 4543133 0 2 97,88, 0,98, -,-, 185581 LTR ERVL 619 chr15 4556373 4557518 CR1-Y1_Aves 228 - 4556373 4557518 0 2 612,533, 0,612, -,-, 185584 LINE CR1 621 chr15 4767905 4768070 (T)n 822 + 4767905 4768070 0 2 84,29, 0,136, +,+, 185680 Simple_repeat Simple_repeat 621 chr15 4829104 4829159 (TCTTT)n 438 + 4829104 4829159 0 2 11,7, 0,48, +,+, 185703 Simple_repeat Simple_repeat 622 chr15 4898356 4898666 (CACG)n 405 + 4898356 4898666 0 2 183,98, 0,212, +,+, 185720 Simple_repeat Simple_repeat 622 chr15 4899012 4899449 (CA)n 494 + 4899012 4899449 0 2 92,257, 0,180, +,+, 185723 Simple_repeat Simple_repeat 622 chr15 4916384 4916503 CR1-D 705 - 4916384 4916503 0 2 43,45, 0,74, -,-, 185733 LINE CR1 622 chr15 4952733 4953376 CR1-D 697 - 4952733 4953376 0 2 44,556, 0,87, -,-, 185745 LINE CR1 623 chr15 5086384 5086638 CR1-E 529 + 5086384 5086638 0 2 51,179, 0,75, +,+, 185800 LINE CR1 631 chr15 6070314 6070439 REP131 244 + 6070314 6070439 0 2 18,16, 0,109, +,+, 186135 DNA? DNA? 631 chr15 6155938 6156395 CR1-D2 608 + 6155938 6156395 0 2 291,166, 0,291, +,+, 186196 LINE CR1 632 chr15 6227603 6227821 (AGCGCGG)n 300 + 6227603 6227821 0 2 53,132, 0,86, +,+, 186229 Simple_repeat Simple_repeat 633 chr15 6319056 6319389 CR1-Y4 423 - 6319056 6319389 0 2 181,152, 0,181, -,-, 186263 LINE CR1 634 chr15 6510624 6510866 CR1-F2 488 + 6510624 6510866 0 2 128,70, 0,172, +,+, 186334 LINE CR1 634 chr15 6515963 6516212 (CAGGAC)n 368 + 6515963 6516212 0 2 161,54, 0,195, +,+, 186337 Simple_repeat Simple_repeat 634 chr15 6529248 6531492 CR1-F2 347 - 6529248 6531492 0 2 67,186, 0,2058, -,-, 186348 LINE CR1 635 chr15 6659683 6660292 CR1-D2 397 + 6659683 6660292 0 2 172,77, 0,532, +,+, 186396 LINE CR1 638 chr15 7047983 7048408 (CATCC)n 734 + 7047983 7048408 0 2 155,80, 0,345, +,+, 186578 Simple_repeat Simple_repeat 640 chr15 7267436 7267867 Char12Mar1_GG 601 - 7267436 7267867 0 2 355,74, 0,357, -,-, 186690 DNA hAT-Charlie 640 chr15 7332218 7332851 OldhAT1 372 - 7332218 7332851 0 2 83,199, 0,434, -,-, 186730 DNA hAT-Ac 641 chr15 7401803 7402399 CR1-C4 570 - 7401803 7402399 0 2 275,73, 0,523, -,-, 186771 LINE CR1 642 chr15 7479537 7480256 Char12Mar1_GG 528 - 7479537 7480256 0 2 596,101, 0,618, -,-, 186820 DNA hAT-Charlie 642 chr15 7578092 7578129 (TTTGT)n 604 + 7578092 7578129 0 2 9,7, 0,30, +,+, 186877 Simple_repeat Simple_repeat 644 chr15 7769109 7769456 REP131 302 - 7769109 7769456 0 2 183,78, 0,269, -,-, 186947 DNA? DNA? 644 chr15 7807992 7808468 CR1-Y1_Aves 74 - 7807992 7808468 0 2 54,88, 0,388, -,-, 186973 LINE CR1 644 chr15 7832564 7834273 CR1-D2 622 - 7832564 7834273 0 2 185,405, 0,1304, -,-, 186985 LINE CR1 644 chr15 7856224 7856304 (AT)n 906 + 7856224 7856304 0 2 24,41, 0,39, +,+, 187004 Simple_repeat Simple_repeat 645 chr15 7870370 7872341 CR1-C4 462 - 7870370 7872341 0 2 107,267, 0,1704, -,-, 187022 LINE CR1 645 chr15 7873382 7874037 Mariner1b_GG 699 - 7873382 7874037 0 2 256,47, 0,608, -,-, 187026 DNA TcMar-Mariner 645 chr15 7892533 7892621 (CTG)n 306 + 7892533 7892621 0 2 17,11, 0,77, +,+, 187036 Simple_repeat Simple_repeat 645 chr15 7925357 7925645 CR1-D2 625 - 7925357 7925645 0 2 234,25, 0,263, -,-, 187051 LINE CR1 646 chr15 8066391 8068041 CR1-C2 594 - 8066391 8068041 0 5 899,263,53,44,183, 0,900,1163,1227,1467, -,-,-,-,-, 187097 LINE CR1 647 chr15 8248250 8248545 CR1-Y2_Aves 282 + 8248250 8248545 0 2 181,114, 0,181, +,+, 187157 LINE CR1 650 chr15 8579109 8579656 CR1-Y1_Aves 458 - 8579109 8579656 0 2 392,150, 0,397, -,-, 187249 LINE CR1 651 chr15 8669751 8670335 CR1-L3A_Croc 155 + 8669751 8670335 0 2 404,138, 0,446, +,+, 187277 LINE CR1 651 chr15 8764464 8765628 GGLTR5A 393 - 8764464 8765628 0 2 146,391, 0,773, -,-, 187325 LTR ERVL 651 chr15 8775731 8776329 CR1-F2 647 - 8775731 8776329 0 2 519,79, 0,519, -,-, 187334 LINE CR1 652 chr15 8848970 8850594 CR1-Y2 123 + 8848970 8850594 0 3 240,355,275, 0,318,1349, +,+,+, 187355 LINE CR1 653 chr15 8980129 8980752 Charlie12_GGa 540 - 8980129 8980752 0 2 332,207, 0,416, -,-, 187412 DNA hAT-Charlie 654 chr15 9088383 9088453 (TATG)n 304 + 9088383 9088453 0 2 15,9, 0,61, +,+, 187459 Simple_repeat Simple_repeat 656 chr15 9419979 9421922 GGERV28_I-int 244 - 9419979 9421922 0 3 120,111,311, 0,941,1632, -,-,-, 187578 LTR ERVK 660 chr15 9934569 9934609 (ACAAGAA)n 510 + 9934569 9934609 0 2 10,6, 0,34, +,+, 187802 Simple_repeat Simple_repeat 660 chr15 9947821 9948042 CR1-Y4 478 + 9947821 9948042 0 2 70,131, 0,90, +,+, 187810 LINE CR1 661 chr15 9973943 9974537 CR1-Y1_Aves 465 - 9973943 9974537 0 2 244,328, 0,266, -,-, 187822 LINE CR1 661 chr15 10060746 10061050 CR1-C4 425 - 10060746 10061050 0 2 120,184, 0,120, -,-, 187868 LINE CR1 661 chr15 10072399 10072890 CR1-Y4 408 + 10072399 10072890 0 2 128,182, 0,309, +,+, 187874 LINE CR1 661 chr15 10082901 10083548 CR1-D2 637 - 10082901 10083548 0 2 193,79, 0,568, -,-, 187879 LINE CR1 661 chr15 10086405 10086835 CR1-C4 384 - 10086405 10086835 0 2 302,115, 0,315, -,-, 187884 LINE CR1 662 chr15 10180373 10181342 CR1-L3B_Croc 274 - 10180373 10181342 0 2 436,240, 0,729, -,-, 187947 LINE CR1 662 chr15 10184113 10184449 CR1-C3 729 + 10184113 10184449 0 2 292,44, 0,292, +,+, 187950 LINE CR1 662 chr15 10195370 10195689 CR1-D2 766 - 10195370 10195689 0 2 55,48, 0,271, -,-, 187961 LINE CR1 662 chr15 10197295 10197756 CR1-L3B_Croc 326 - 10197295 10197756 0 2 141,275, 0,186, -,-, 187964 LINE CR1 663 chr15 10270880 10271574 CR1-L3A_Croc 274 - 10270880 10271574 0 2 146,129, 0,565, -,-, 188011 LINE CR1 663 chr15 10338747 10341494 CR1-C4 603 - 10338747 10341494 0 2 181,93, 0,2654, -,-, 188054 LINE CR1 664 chr15 10369587 10369625 (TCTT)n 544 + 10369587 10369625 0 2 9,10, 0,28, +,+, 188077 Simple_repeat Simple_repeat 666 chr15 10657594 10658266 CR1-11_Crp 197 - 10657594 10658266 0 2 310,163, 0,509, -,-, 188283 LINE CR1 666 chr15 10673831 10674139 CR1-D2 608 - 10673831 10674139 0 2 155,152, 0,156, -,-, 188290 LINE CR1 666 chr15 10721099 10725136 GGLTR5A 508 - 10721099 10725136 0 2 74,88, 0,3949, -,-, 188328 LTR ERVL 666 chr15 10735294 10735900 CR1-C4 547 + 10735294 10735900 0 2 493,109, 0,497, +,+, 188339 LINE CR1 667 chr15 10752416 10754834 CR1-C2 564 + 10752416 10754834 0 2 78,167, 0,2251, +,+, 188346 LINE CR1 667 chr15 10760089 10760468 CR1-F2 393 + 10760089 10760468 0 3 88,42,89, 0,173,290, +,+,+, 188353 LINE CR1 668 chr15 10884368 10886550 CR1-F2 523 - 10884368 10886550 0 2 44,227, 0,1955, -,-, 188416 LINE CR1 668 chr15 10884402 10884878 CR1-D2 626 + 10884402 10884878 0 3 245,103,74, 0,299,402, +,+,+, 188417 LINE CR1 668 chr15 10933674 10933889 CR1-Y2 406 - 10933674 10933889 0 2 12,203, 0,12, -,-, 188448 LINE CR1 668 chr15 10964717 10965603 CR1-D2 481 + 10964717 10965603 0 2 176,261, 0,625, +,+, 188454 LINE CR1 669 chr15 11060478 11061151 CR1-11_Crp 194 + 11060478 11061151 0 2 336,228, 0,445, +,+, 188486 LINE CR1 669 chr15 11082567 11083391 CR1-Y4 574 + 11082567 11083391 0 2 371,453, 0,371, +,+, 188494 LINE CR1 670 chr15 11214764 11214828 (TTTC)n 354 + 11214764 11214828 0 2 12,20, 0,44, +,+, 188569 Simple_repeat Simple_repeat 670 chr15 11226871 11227860 CR1-F2 474 + 11226871 11227860 0 2 212,232, 0,757, +,+, 188575 LINE CR1 670 chr15 11245596 11245858 (TCCA)n 526 + 11245596 11245858 0 2 194,52, 0,210, +,+, 188585 Simple_repeat Simple_repeat 670 chr15 11245991 11246738 (TCCA)n 595 + 11245991 11246738 0 2 557,179, 0,568, +,+, 188587 Simple_repeat Simple_repeat 671 chr15 11377527 11377796 CR1-F2 623 - 11377527 11377796 0 2 108,46, 0,223, -,-, 188686 LINE CR1 672 chr15 11426584 11426882 AmnSINE1 360 + 11426584 11426882 0 2 130,150, 0,148, +,+, 188710 SINE 5S-Deu-L2 672 chr15 11495128 11495186 A-rich 378 + 11495128 11495186 0 2 16,17, 0,41, +,+, 188745 Low_complexity Low_complexity 672 chr15 11503603 11504256 CR1-D2 583 + 11503603 11504256 0 2 365,288, 0,365, +,+, 188749 LINE CR1 672 chr15 11507387 11507575 CR1-Y4 475 - 11507387 11507575 0 2 41,115, 0,73, -,-, 188755 LINE CR1 672 chr15 11519846 11522195 GGERV28_I-int 169 + 11519846 11522195 0 2 792,415, 0,1934, +,+, 188762 LTR ERVK 672 chr15 11533434 11533749 Char12Mar1_GG 530 - 11533434 11533749 0 2 86,178, 0,137, -,-, 188770 DNA hAT-Charlie 673 chr15 11569845 11574027 CR1-F2 434 + 11569845 11574027 0 2 188,253, 0,3929, +,+, 188782 LINE CR1 674 chr15 11690089 11691723 CR1-C4 581 + 11690089 11691723 0 3 989,247,398, 0,989,1236, +,+,+, 188856 LINE CR1 674 chr15 11788137 11788521 CR1-Y2_Aves 389 + 11788137 11788521 0 2 215,107, 0,277, +,+, 188889 LINE CR1 675 chr15 11830713 11831088 GGERV22_LTR 548 + 11830713 11831088 0 2 169,169, 0,206, +,+, 188909 LTR ERVL 675 chr15 11852337 11854379 CR1-F2 382 + 11852337 11854379 0 4 981,820,87,150, 0,981,1805,1892, +,+,+,+, 188923 LINE CR1 677 chr15 12124692 12125028 CR1-1_Amn 255 + 12124692 12125028 0 2 123,146, 0,190, +,+, 189063 LINE CR1 678 chr15 12285050 12285338 (CCCTTCT)n 184 + 12285050 12285338 0 2 24,59, 0,229, +,+, 189154 Simple_repeat Simple_repeat 680 chr15 12508792 12508963 CR1-H2 633 - 12508792 12508963 0 2 78,42, 0,129, -,-, 189316 LINE CR1 681 chr15 12640390 12640485 (A)n 777 + 12640390 12640485 0 2 25,24, 0,71, +,+, 189410 Simple_repeat Simple_repeat 681 chr15 12678567 12680103 CR1-C4 656 - 12678567 12680103 0 4 453,311,44,319, 0,706,1017,1217, -,-,-,-, 189431 LINE CR1 681 chr15 12681355 12683077 CR1-Y4 620 + 12681355 12683077 0 2 675,216, 0,1506, +,+, 189434 LINE CR1 681 chr15 12689797 12697675 ENS3-int 571 - 12689797 12697675 0 9 239,572,1669,809,2136,780,61,21,421, 0,539,1111,2782,4091,6453,7233,7436,7457, -,-,-,-,-,-,-,-,-, 189439 LTR ERVL 682 chr15 12720468 12720808 Z-REP 26 + 12720468 12720808 0 2 13,150, 0,190, +,+, 189453 Satellite macro 682 chr15 12720481 12721449 GGLTR5B 502 - 12720481 12721449 0 3 177,149,72, 0,239,896, -,-,-, 189454 LTR ERVL 682 chr15 12726578 12730131 GGLTR11-int 792 - 12726578 12730131 0 2 1936,1103, 0,2450, -,-, 189461 LTR ERV1 682 chr15 12738488 12739859 (CAGGC)n 608 + 12738488 12739859 0 6 129,6,11,36,260,97, 0,306,610,801,837,1274, +,+,+,+,+,+, 189470 Simple_repeat Simple_repeat 682 chr15 12741059 12741478 (CAAGG)n 590 + 12741059 12741478 0 2 198,221, 0,198, +,+, 189483 Simple_repeat Simple_repeat 682 chr15 12741510 12741896 (CAAGG)n 631 + 12741510 12741896 0 2 183,203, 0,183, +,+, 189485 Simple_repeat Simple_repeat 682 chr15 12742337 12742999 (CAAGG)n 657 + 12742337 12742999 0 3 196,19,252, 0,375,410, +,+,+, 189489 Simple_repeat Simple_repeat 682 chr15 12743228 12743631 (CAGGC)n 530 + 12743228 12743631 0 2 98,125, 0,278, +,+, 189493 Simple_repeat Simple_repeat 682 chr15 12744378 12745035 (CAAGG)n 632 + 12744378 12745035 0 3 177,30,78, 0,364,579, +,+,+, 189499 Simple_repeat Simple_repeat 682 chr15 12745298 12759420 GGXHOI 393 - 12745298 12759420 0 10 2572,844,2233,277,306,1024,802,3265,1169,1469, 0,2594,3459,5709,5998,6322,7358,8181,11467,12653, -,-,-,-,-,-,-,-,-,-, 189503 Satellite W-chromosome 682 chr15 12761265 12762806 GGXHOI 362 - 12761265 12762806 0 2 755,771, 0,770, -,-, 189505 Satellite W-chromosome 585 chr15_NT_462466v1_random 7524 7614 CR1-C4 681 + 7524 7614 0 2 47,43, 0,47, +,+, 189527 LINE CR1 585 chr15_NT_462466v1_random 20705 21009 (ACCCCATAGGG)n 472 + 20705 21009 0 2 104,74, 0,230, +,+, 189563 Satellite Satellite 585 chr15_NT_462477v1_random 5446 6606 CR1-H 698 - 5446 6606 0 2 785,163, 0,997, -,-, 189635 LINE CR1 585 chr15_NT_462477v1_random 9452 10097 CR1-D2 625 - 9452 10097 0 2 193,78, 0,567, -,-, 189638 LINE CR1 585 chr15_NT_462507v1_random 4650 5029 CR1-F2 452 + 4650 5029 0 2 88,86, 0,293, +,+, 189745 LINE CR1 585 chr15_NT_462546v1_random 208 428 (GTAC)n 648 + 208 428 0 2 55,129, 0,91, +,+, 189795 Simple_repeat Simple_repeat 585 chr16 803 10552 GGXHOI 401 - 803 10552 0 7 2365,431,473,1388,552,3125,1294, 0,2387,2840,3331,4745,5313,8455, -,-,-,-,-,-,-, 189802 Satellite W-chromosome 585 chr16 68617 68996 (ATGCAAC)n 230 + 68617 68996 0 2 171,124, 0,255, +,+, 189843 Simple_repeat Simple_repeat 586 chr16 162441 162973 CR1-Y3 456 - 162441 162973 0 2 89,443, 0,89, -,-, 189913 LINE CR1 586 chr16 238701 239066 (TTAGGG)n 492 + 238701 239066 0 2 180,170, 0,195, +,+, 189987 Simple_repeat Simple_repeat 587 chr16 328357 335599 GGLTR11-int 358 + 328357 335599 0 2 79,79, 0,7163, +,+, 190044 LTR ERV1 587 chr16 369597 370746 CR1-H2 702 - 369597 370746 0 10 285,56,33,97,45,34,46,48,46,44, 0,580,636,669,766,811,885,970,1059,1105, -,-,-,-,-,-,-,-,-,-, 190057 LINE CR1 587 chr16 369871 370180 CR1-G 768 - 369871 370180 0 4 179,44,39,46, 0,179,223,263, -,-,-,-, 190058 LINE CR1 587 chr16 379430 379883 CR1-G 701 - 379430 379883 0 2 285,168, 0,285, -,-, 190065 LINE CR1 587 chr16 379880 380056 CR1-G 757 - 379880 380056 0 3 46,44,46, 0,46,130, -,-,-, 190066 LINE CR1 587 chr16 380095 380186 CR1-G 724 - 380095 380186 0 2 48,43, 0,48, -,-, 190069 LINE CR1 587 chr16 380183 380403 CR1-Y2 653 - 380183 380403 0 3 42,46,43, 0,87,177, -,-,-, 190070 LINE CR1 587 chr16 385578 386209 GGERVL-B-int 748 - 385578 386209 0 2 208,423, 0,208, -,-, 190079 LTR ERVL 587 chr16 387406 388180 GGERVL-B-int 749 - 387406 388180 0 2 205,569, 0,205, -,-, 190083 LTR ERVL 587 chr16 388180 388432 GGLTR11 677 + 388180 388432 0 2 100,152, 0,100, +,+, 190084 LTR ERV1 588 chr16 396643 400400 GGERVL-B-int 798 - 396643 400400 0 3 1673,1509,575, 0,1673,3182, -,-,-, 190095 LTR ERVL 588 chr16 400400 400653 GGLTR11 691 + 400400 400653 0 2 100,153, 0,100, +,+, 190096 LTR ERV1 588 chr16 405208 405990 GGERVL-B-int 772 - 405208 405990 0 2 209,573, 0,209, -,-, 190101 LTR ERVL 588 chr16 405990 406243 GGLTR11 685 + 405990 406243 0 2 100,153, 0,100, +,+, 190102 LTR ERV1 588 chr16 413313 413554 CR1-E 727 + 413313 413554 0 2 108,105, 0,136, +,+, 190112 LINE CR1 588 chr16 422065 422318 GGLTR11 688 - 422065 422318 0 2 155,98, 0,155, -,-, 190121 LTR ERV1 588 chr16 422318 423098 GGERVL-B-int 774 + 422318 423098 0 2 571,209, 0,571, +,+, 190122 LTR ERVL 588 chr16 442954 443207 GGLTR11 685 - 442954 443207 0 2 155,98, 0,155, -,-, 190140 LTR ERV1 588 chr16 443207 446960 GGERVL-B-int 785 + 443207 446960 0 3 575,1511,1667, 0,575,2086, +,+,+, 190141 LTR ERVL 588 chr16 450373 452013 CR1-F 453 + 450373 452013 0 3 220,603,127, 0,223,1513, +,+,+, 190146 LINE CR1 588 chr16 451193 451533 GGLTR3C2 342 - 451193 451533 0 2 102,238, 0,102, -,-, 190147 LTR ERVL 588 chr16 463884 464125 CR1-E 727 - 463884 464125 0 2 105,108, 0,133, -,-, 190163 LINE CR1 588 chr16 467964 468217 GGLTR11 652 - 467964 468217 0 2 155,98, 0,155, -,-, 190167 LTR ERV1 588 chr16 468217 471970 GGERVL-B-int 795 + 468217 471970 0 3 574,1510,1669, 0,574,2084, +,+,+, 190168 LTR ERVL 588 chr16 475200 476027 CR1-F 570 + 475200 476027 0 2 220,604, 0,223, +,+, 190173 LINE CR1 588 chr16 487302 491063 GGERVL-B-int 793 - 487302 491063 0 3 1674,1512,575, 0,1674,3186, -,-,-, 190182 LTR ERVL 588 chr16 491063 491316 GGLTR11 662 + 491063 491316 0 2 100,153, 0,100, +,+, 190183 LTR ERV1 588 chr16 498210 498451 CR1-E 727 + 498210 498451 0 2 108,105, 0,136, +,+, 190193 LINE CR1 588 chr16 508195 508448 GGLTR11 665 - 508195 508448 0 2 155,98, 0,155, -,-, 190204 LTR ERV1 588 chr16 508448 512220 GGERVL-B-int 795 + 508448 512220 0 3 575,1512,1685, 0,575,2087, +,+,+, 190205 LTR ERVL 588 chr16 514463 514744 CR1-F2 687 + 514463 514744 0 3 91,35,155, 0,91,126, +,+,+, 190209 LINE CR1 588 chr16 517840 518452 CR1-X 339 - 517840 518452 0 2 426,128, 0,484, -,-, 190211 LINE CR1 589 chr16 525262 526255 ENS1B-LTR 453 - 525262 526255 0 3 424,294,142, 0,518,851, -,-,-, 190217 LTR ERVL 589 chr16 539917 541905 GGLTR7-int 231 - 539917 541905 0 3 740,225,144, 0,740,1844, -,-,-, 190234 LTR ERV1 589 chr16 541455 541619 GGLTR3D 314 + 541455 541619 0 2 51,73, 0,91, +,+, 190235 LTR ERVL 589 chr16 542336 542474 CR1-F 602 + 542336 542474 0 2 13,44, 0,94, +,+, 190238 LINE CR1 589 chr16 545688 546307 CR1-X 351 - 545688 546307 0 2 424,128, 0,491, -,-, 190243 LINE CR1 589 chr16 553125 554117 ENS1B-LTR 425 - 553125 554117 0 3 430,335,178, 0,440,814, -,-,-, 190249 LTR ERVL 589 chr16 561765 563996 GGLTR7-int 313 - 561765 563996 0 5 205,86,678,235,144, 0,205,294,974,2087, -,-,-,-,-, 190262 LTR ERV1 589 chr16 563546 563710 GGLTR3D 314 + 563546 563710 0 2 51,73, 0,91, +,+, 190263 LTR ERVL 589 chr16 582207 582828 CR1-X 352 + 582207 582828 0 2 128,425, 0,196, +,+, 190285 LINE CR1 589 chr16 585941 586222 CR1-F2 683 - 585941 586222 0 3 165,34,82, 0,165,199, -,-,-, 190289 LINE CR1 589 chr16 586992 587249 CR1-Y4 567 - 586992 587249 0 2 202,55, 0,202, -,-, 190291 LINE CR1 589 chr16 598460 599069 CR1-X 285 + 598460 599069 0 2 116,461, 0,148, +,+, 190298 LINE CR1 589 chr16 599527 603621 GGLTR7-int 153 + 599527 603621 0 3 447,612,2311, 0,707,1783, +,+,+, 190300 LTR ERV1 589 chr16 609323 613768 LSU-rRNA_Hsa 651 - 609323 613768 0 3 1539,106,2750, 0,1589,1695, -,-,-, 190317 rRNA rRNA 589 chr16 620960 621201 CR1-E 727 + 620960 621201 0 2 108,105, 0,136, +,+, 190339 LINE CR1 589 chr16 651661 652209 (GGAA)n 872 + 651661 652209 0 2 179,358, 0,190, +,+, 190368 Simple_repeat Simple_repeat 585 chr16_NT_462548v1_random 5892 6430 GGLTR11 677 - 5892 6430 0 2 436,100, 0,438, -,-, 190375 LTR ERV1 585 chr16_NT_462548v1_random 6430 10051 GGLTR3E1 709 + 6430 10051 0 3 107,217,3297, 0,107,324, +,+,+, 190376 LTR ERVL 585 chr16_NT_462548v1_random 13389 14220 CR1-F 545 + 13389 14220 0 2 218,613, 0,218, +,+, 190382 LINE CR1 585 chr16_NT_462548v1_random 16398 17334 CR1-Y1_Aves 144 + 16398 17334 0 2 744,178, 0,758, +,+, 190384 LINE CR1 585 chr16_NT_462548v1_random 28937 29727 GGERVL-B-int 790 - 28937 29727 0 2 209,581, 0,209, -,-, 190395 LTR ERVL 585 chr16_NT_462548v1_random 29727 29980 GGLTR11 661 + 29727 29980 0 2 100,153, 0,100, +,+, 190396 LTR ERV1 585 chr16_NT_462548v1_random 35557 35816 CR1-Y4 605 - 35557 35816 0 2 201,58, 0,201, -,-, 190405 LINE CR1 585 chr16_NT_462548v1_random 37979 41341 GGERVL-B-int 769 - 37979 41341 0 3 1731,1318,313, 0,1731,3049, -,-,-, 190409 LTR ERVL 585 chr16_NT_462548v1_random 47673 47926 GGLTR11 678 - 47673 47926 0 2 155,98, 0,155, -,-, 190418 LTR ERV1 585 chr16_NT_462548v1_random 47926 48718 GGERVL-B-int 786 + 47926 48718 0 2 581,211, 0,581, +,+, 190419 LTR ERVL 585 chr16_NT_462548v1_random 49167 49261 (CACTG)n 408 + 49167 49261 0 2 18,24, 0,70, +,+, 190421 Simple_repeat Simple_repeat 585 chr16_NT_462548v1_random 49309 52345 GGERVL-B-int 807 + 49309 52345 0 2 1271,1765, 0,1271, +,+, 190423 LTR ERVL 585 chr16_NT_462548v1_random 55715 56539 CR1-F 568 + 55715 56539 0 2 214,610, 0,214, +,+, 190428 LINE CR1 585 chr16_NT_462548v1_random 56533 56928 GGLTR3C2 381 - 56533 56928 0 2 102,293, 0,102, -,-, 190429 LTR ERVL 585 chr16_NT_462548v1_random 58880 58996 (CAGTG)n 328 + 58880 58996 0 2 20,27, 0,89, +,+, 190433 Simple_repeat Simple_repeat 585 chr16_NT_462548v1_random 74490 75277 GGERVL-B-int 781 - 74490 75277 0 2 206,581, 0,206, -,-, 190454 LTR ERVL 585 chr16_NT_462548v1_random 75277 75829 GGLTR11 664 + 75277 75829 0 2 100,452, 0,100, +,+, 190455 LTR ERV1 585 chr16_NT_462548v1_random 83645 87398 GGERVL-B-int 790 - 83645 87398 0 3 1668,1510,575, 0,1668,3178, -,-,-, 190463 LTR ERVL 585 chr16_NT_462548v1_random 87398 87651 GGLTR11 678 + 87398 87651 0 2 100,153, 0,100, +,+, 190464 LTR ERV1 585 chr16_NT_462548v1_random 95923 99781 GGERVL-B-int 783 - 95923 99781 0 2 3283,575, 0,3283, -,-, 190475 LTR ERVL 585 chr16_NT_462548v1_random 99781 100034 GGLTR11 643 + 99781 100034 0 2 100,153, 0,100, +,+, 190476 LTR ERV1 585 chr16_NT_462548v1_random 108159 111939 GGERVL-B-int 797 - 108159 111939 0 3 1676,1511,575, 0,1694,3205, -,-,-, 190487 LTR ERVL 585 chr16_NT_462548v1_random 111939 112192 GGLTR11 643 + 111939 112192 0 2 100,153, 0,100, +,+, 190488 LTR ERV1 585 chr16_NT_462548v1_random 120701 120942 CR1-E 727 - 120701 120942 0 2 105,108, 0,133, -,-, 190497 LINE CR1 585 chr16_NT_462549v1_random 10489 11101 CR1-X 350 + 10489 11101 0 2 128,426, 0,186, +,+, 190519 LINE CR1 585 chr16_NT_462549v1_random 14228 14509 CR1-F2 672 - 14228 14509 0 3 165,34,82, 0,165,199, -,-,-, 190523 LINE CR1 585 chr16_NT_462549v1_random 16122 19880 GGERVL-B-int 798 - 16122 19880 0 3 1673,1510,575, 0,1673,3183, -,-,-, 190528 LTR ERVL 585 chr16_NT_462549v1_random 19880 20133 GGLTR11 662 + 19880 20133 0 2 100,153, 0,100, +,+, 190529 LTR ERV1 585 chr16_NT_462549v1_random 24730 25305 GGLTR5B 540 - 24730 25305 0 2 266,272, 0,303, -,-, 190532 LTR ERVL 585 chr16_NT_462549v1_random 25502 25781 CR1-Y4 568 - 25502 25781 0 2 221,58, 0,221, -,-, 190534 LINE CR1 585 chr16_NT_462549v1_random 28057 31814 GGERVL-B-int 798 - 28057 31814 0 3 1673,1509,575, 0,1673,3182, -,-,-, 190537 LTR ERVL 585 chr16_NT_462549v1_random 31814 32067 GGLTR11 685 + 31814 32067 0 2 100,153, 0,100, +,+, 190538 LTR ERV1 585 chr16_NT_462549v1_random 36621 37403 GGERVL-B-int 772 - 36621 37403 0 2 209,573, 0,209, -,-, 190543 LTR ERVL 585 chr16_NT_462549v1_random 37403 37656 GGLTR11 685 + 37403 37656 0 2 100,153, 0,100, +,+, 190544 LTR ERV1 585 chr16_NT_462549v1_random 45855 49479 GGERVL-B-int 711 - 45855 49479 0 3 1671,1476,475, 0,1671,3149, -,-,-, 190554 LTR ERVL 585 chr16_NT_462550v1_random 4977 5218 CR1-E 727 - 4977 5218 0 2 105,108, 0,133, -,-, 190558 LINE CR1 585 chr16_NT_462550v1_random 12041 12593 GGLTR11 664 - 12041 12593 0 2 454,98, 0,454, -,-, 190566 LTR ERV1 585 chr16_NT_462550v1_random 13041 15750 GGERVL-B-int 741 + 13041 15750 0 4 95,95,718,1702, 0,95,190,1007, +,+,+,+, 190568 LTR ERVL 585 chr16_NT_462550v1_random 17950 18231 CR1-F2 687 + 17950 18231 0 3 91,35,155, 0,91,126, +,+,+, 190574 LINE CR1 585 chr16_NT_462550v1_random 21052 21674 CR1-X 361 - 21052 21674 0 2 426,128, 0,494, -,-, 190577 LINE CR1 585 chr16_NT_462551v1_random 2170 3104 CR1-Y1_Aves 128 - 2170 3104 0 2 199,713, 0,221, -,-, 190592 LINE CR1 585 chr16_NT_462551v1_random 5273 6089 CR1-F 552 - 5273 6089 0 2 593,220, 0,596, -,-, 190594 LINE CR1 585 chr16_NT_462551v1_random 10166 13904 GGERVL-B-int 786 - 10166 13904 0 2 3166,572, 0,3166, -,-, 190600 LTR ERVL 585 chr16_NT_462551v1_random 13904 14156 GGLTR11 654 + 13904 14156 0 2 100,152, 0,100, +,+, 190601 LTR ERV1 585 chr16_NT_462551v1_random 19438 20147 CR1-X 421 - 19438 20147 0 2 176,435, 0,274, -,-, 190607 LINE CR1 585 chr16_NT_462551v1_random 21675 25432 GGERVL-B-int 798 - 21675 25432 0 3 1673,1509,575, 0,1673,3182, -,-,-, 190609 LTR ERVL 585 chr16_NT_462551v1_random 25432 25685 GGLTR11 691 + 25432 25685 0 2 100,153, 0,100, +,+, 190610 LTR ERV1 585 chr16_NT_462552v1_random 4136 4417 CR1-F2 672 - 4136 4417 0 3 165,34,82, 0,165,199, -,-,-, 190617 LINE CR1 585 chr16_NT_462552v1_random 6029 9787 GGERVL-B-int 796 - 6029 9787 0 3 1674,1510,574, 0,1674,3184, -,-,-, 190622 LTR ERVL 585 chr16_NT_462552v1_random 9787 10040 GGLTR11 662 + 9787 10040 0 2 100,153, 0,100, +,+, 190623 LTR ERV1 585 chr16_NT_462552v1_random 15097 15358 CR1-Y4 62 - 15097 15358 0 2 87,36, 0,225, -,-, 190626 LINE CR1 585 chr16_NT_462552v1_random 17293 20824 GGERVL-B-int 706 - 17293 20824 0 3 1917,791,565, 0,2175,2966, -,-,-, 190630 LTR ERVL 585 chr16_NT_462552v1_random 20824 21066 GGLTR11 524 + 20824 21066 0 2 94,145, 0,97, +,+, 190631 LTR ERV1 585 chr16_NT_462553v1_random 20231 20725 GGLTR3F2 640 + 20231 20725 0 2 233,208, 0,286, +,+, 190646 LTR ERVL 585 chr16_NT_462554v1_random 4999 5280 CR1-F2 687 + 4999 5280 0 3 91,35,155, 0,91,126, +,+,+, 190653 LINE CR1 585 chr16_NT_462554v1_random 8383 8994 CR1-X 342 - 8383 8994 0 2 425,128, 0,483, -,-, 190656 LINE CR1 585 chr16_NT_462554v1_random 15809 16808 ENS1B-LTR 503 - 15809 16808 0 2 375,552, 0,447, -,-, 190662 LTR ERVL 585 chr16_NT_462555v1_random 543 823 CR1-F2 678 + 543 823 0 3 90,35,155, 0,90,125, +,+,+, 190670 LINE CR1 585 chr16_NT_462555v1_random 3621 4243 CR1-X 361 - 3621 4243 0 2 426,128, 0,494, -,-, 190673 LINE CR1 585 chr16_NT_462556v1_random 4573 4833 CR1-C4 392 + 4573 4833 0 2 213,22, 0,238, +,+, 190692 LINE CR1 585 chr16_NT_462556v1_random 7237 7478 CR1-E 727 + 7237 7478 0 2 108,105, 0,136, +,+, 190698 LINE CR1 585 chr16_NT_462557v1_random 1492 1751 CR1-C4 398 - 1492 1751 0 2 22,212, 0,47, -,-, 190707 LINE CR1 585 chr16_NT_462557v1_random 6350 6603 GGLTR11 652 - 6350 6603 0 2 155,98, 0,155, -,-, 190713 LTR ERV1 585 chr16_NT_462557v1_random 6603 10355 GGERVL-B-int 794 + 6603 10355 0 3 574,1512,1666, 0,574,2086, +,+,+, 190714 LTR ERVL 585 chr16_NT_462559v1_random 153 403 GGLTR11 668 + 153 403 0 2 98,152, 0,98, +,+, 190729 LTR ERV1 585 chr16_NT_462559v1_random 4889 5633 GGERVL-B-int 575 - 4889 5633 0 2 187,551, 0,193, -,-, 190734 LTR ERVL 585 chr16_NT_462559v1_random 5633 5884 GGLTR11 571 + 5633 5884 0 2 104,147, 0,104, +,+, 190735 LTR ERV1 585 chr16_NT_462560v1_random 7352 7890 GGLTR11 677 - 7352 7890 0 2 436,100, 0,438, -,-, 190747 LTR ERV1 585 chr16_NT_462560v1_random 7890 8625 GGLTR3E1 693 + 7890 8625 0 3 107,221,407, 0,107,328, +,+,+, 190748 LTR ERVL 585 chr16_NT_462562v1_random 7037 7649 CR1-G 754 - 7037 7649 0 5 285,168,44,43,43, 0,285,482,526,569, -,-,-,-,-, 190764 LINE CR1 588 chr17 515994 516376 (CCTTG)n 507 + 515994 516376 0 2 178,204, 0,178, +,+, 190786 Simple_repeat Simple_repeat 588 chr17 516475 517030 (CCTTG)n 472 + 516475 517030 0 2 134,243, 0,312, +,+, 190788 Simple_repeat Simple_repeat 588 chr17 517342 523222 GGLTR7-int 693 + 517342 523222 0 3 4647,657,575, 0,4647,5305, +,+,+, 190792 LTR ERV1 588 chr17 523251 524136 (CCTTG)n 549 + 523251 524136 0 3 180,319,163, 0,220,722, +,+,+, 190793 Simple_repeat Simple_repeat 73 chr17 523990 524508 (GCCTG)n 519 + 523990 524508 0 3 180,126,34, 0,180,484, +,+,+, 190795 Simple_repeat Simple_repeat 589 chr17 525053 526549 (CCTTG)n 605 + 525053 526549 0 5 179,259,285,129,267, 0,200,637,1100,1229, +,+,+,+,+, 190801 Simple_repeat Simple_repeat 589 chr17 568717 569174 CR1-H 698 + 568717 569174 0 2 296,161, 0,296, +,+, 190854 LINE CR1 589 chr17 572007 572634 CR1-H 692 + 572007 572634 0 2 469,139, 0,488, +,+, 190857 LINE CR1 589 chr17 578206 578835 CR1-H 663 + 578206 578835 0 2 482,141, 0,488, +,+, 190864 LINE CR1 589 chr17 599584 600041 CR1-H 677 + 599584 600041 0 2 296,161, 0,296, +,+, 190882 LINE CR1 589 chr17 606469 609044 CR1-F 883 + 606469 609044 0 2 2125,442, 0,2133, +,+, 190889 LINE CR1 589 chr17 616681 619245 CR1-F 876 + 616681 619245 0 2 2114,442, 0,2122, +,+, 190901 LINE CR1 589 chr17 628712 629333 CR1-H 636 + 628712 629333 0 2 482,139, 0,482, +,+, 190915 LINE CR1 589 chr17 633270 634539 CR1-H 587 + 633270 634539 0 2 1158,111, 0,1158, +,+, 190917 LINE CR1 589 chr17 636539 637166 CR1-H 692 + 636539 637166 0 2 469,139, 0,488, +,+, 190920 LINE CR1 589 chr17 646082 647927 CR1-F 868 + 646082 647927 0 2 636,1128, 0,717, +,+, 190930 LINE CR1 589 chr17 647927 653743 GGERV10_LTR 923 - 647927 653743 0 3 220,5375,220, 0,220,5596, -,-,-, 190932 LTR ERVL 590 chr17 674321 674702 GGERVL-B-int 479 - 674321 674702 0 2 166,168, 0,213, -,-, 190940 LTR ERVL 590 chr17 694782 695611 CR1-X2 459 - 694782 695611 0 2 93,275, 0,554, -,-, 190948 LINE CR1 590 chr17 695612 696348 CR1-X2 477 - 695612 696348 0 2 380,355, 0,381, -,-, 190949 LINE CR1 590 chr17 704618 704999 GGERVL-B-int 479 + 704618 704999 0 2 168,166, 0,215, +,+, 190952 LTR ERVL 590 chr17 730926 731183 CR1-Y4 605 - 730926 731183 0 2 95,154, 0,103, -,-, 190967 LINE CR1 590 chr17 751379 752309 CR1-Y2_Aves 213 + 751379 752309 0 3 368,387,157, 0,386,773, +,+,+, 190985 LINE CR1 590 chr17 755620 755969 CR1-D2 565 - 755620 755969 0 2 48,301, 0,48, -,-, 190991 LINE CR1 591 chr17 813602 813954 CR1-X1 486 + 813602 813954 0 2 107,245, 0,107, +,+, 191018 LINE CR1 591 chr17 819070 819455 CR1-Y4 489 - 819070 819455 0 2 116,269, 0,116, -,-, 191021 LINE CR1 591 chr17 834556 834618 (TGTA)n 400 + 834556 834618 0 2 6,33, 0,29, +,+, 191030 Simple_repeat Simple_repeat 591 chr17 841862 842897 CR1-C4 449 + 841862 842897 0 2 317,440, 0,595, +,+, 191041 LINE CR1 591 chr17 867684 867777 (GCG)n 378 + 867684 867777 0 2 7,50, 0,43, +,+, 191054 Simple_repeat Simple_repeat 592 chr17 987927 988603 CR1-Y2_Aves 231 - 987927 988603 0 2 48,110, 0,566, -,-, 191110 LINE CR1 593 chr17 1176879 1177078 GA-rich 360 + 1176879 1177078 0 2 41,123, 0,76, +,+, 191212 Low_complexity Low_complexity 594 chr17 1196762 1197268 (CCCTAA)n 650 + 1196762 1197268 0 3 49,191,179, 0,86,327, +,+,+, 191224 Simple_repeat Simple_repeat 594 chr17 1198266 1198912 CR1-11_Crp 194 - 1198266 1198912 0 2 184,426, 0,220, -,-, 191225 LINE CR1 594 chr17 1225411 1225551 CR1-C4 609 + 1225411 1225551 0 2 93,40, 0,100, +,+, 191236 LINE CR1 594 chr17 1257028 1259250 CR1-C4 631 + 1257028 1259250 0 2 554,1668, 0,554, +,+, 191245 LINE CR1 595 chr17 1322085 1322247 CR1-E 683 + 1322085 1322247 0 2 61,101, 0,61, +,+, 191266 LINE CR1 595 chr17 1323217 1323567 CR1-X1 345 + 1323217 1323567 0 2 262,87, 0,263, +,+, 191269 LINE CR1 595 chr17 1424439 1424688 CR1-X1 506 + 1424439 1424688 0 2 93,156, 0,93, +,+, 191315 LINE CR1 595 chr17 1427665 1427906 CR1-E 465 - 1427665 1427906 0 2 152,89, 0,152, -,-, 191317 LINE CR1 596 chr17 1481314 1483010 CR1-C3 608 - 1481314 1483010 0 3 221,99,1376, 0,221,320, -,-,-, 191348 LINE CR1 597 chr17 1591573 1592779 CR1-F2 522 - 1591573 1592779 0 2 133,1073, 0,133, -,-, 191400 LINE CR1 597 chr17 1612550 1613853 CR1-L3B_Croc 393 + 1612550 1613853 0 3 78,74,243, 0,701,1060, +,+,+, 191408 LINE CR1 597 chr17 1631238 1631291 (GTTTT)n 514 + 1631238 1631291 0 2 6,7, 0,46, +,+, 191422 Simple_repeat Simple_repeat 597 chr17 1679851 1681498 CR1-L3B_Croc 189 - 1679851 1681498 0 2 220,303, 0,1344, -,-, 191462 LINE CR1 597 chr17 1694419 1694586 G-rich 522 + 1694419 1694586 0 2 29,91, 0,76, +,+, 191479 Low_complexity Low_complexity 598 chr17 1716649 1717732 GGLTR10C-int 478 + 1716649 1717732 0 2 374,709, 0,374, +,+, 191499 LTR ERVK 598 chr17 1743877 1744179 CR1-C4 573 - 1743877 1744179 0 2 169,133, 0,169, -,-, 191515 LINE CR1 598 chr17 1761189 1761643 CR1-L3B_Croc 311 + 1761189 1761643 0 2 262,162, 0,292, +,+, 191526 LINE CR1 598 chr17 1817485 1817767 CR1-D2 440 + 1817485 1817767 0 2 178,104, 0,178, +,+, 191558 LINE CR1 599 chr17 1939176 1939513 CR1-X1 282 + 1939176 1939513 0 2 185,152, 0,185, +,+, 191602 LINE CR1 601 chr17 2203024 2204350 CR1-L3B_Croc 224 - 2203024 2204350 0 2 481,373, 0,953, -,-, 191700 LINE CR1 602 chr17 2263197 2263250 (GCG)n 402 + 2263197 2263250 0 2 6,12, 0,41, +,+, 191724 Simple_repeat Simple_repeat 602 chr17 2334476 2335422 CR1-F 451 - 2334476 2335422 0 2 732,208, 0,738, -,-, 191765 LINE CR1 602 chr17 2338747 2338938 CR1-X2 275 - 2338747 2338938 0 2 101,90, 0,101, -,-, 191767 LINE CR1 603 chr17 2444691 2450504 GGERV10_LTR 976 - 2444691 2450504 0 3 219,5376,217, 0,219,5596, -,-,-, 191812 LTR ERVL 603 chr17 2450528 2454986 GGERV10_LTR 988 - 2450528 2454986 0 2 4237,220, 0,4238, -,-, 191813 LTR ERVL 603 chr17 2484710 2485241 (CCCTAT)n 206 + 2484710 2485241 0 2 96,17, 0,514, +,+, 191821 Simple_repeat Simple_repeat 605 chr17 2746757 2749108 CR1-F2 408 - 2746757 2749108 0 2 251,526, 0,1825, -,-, 191964 LINE CR1 606 chr17 2761405 2761735 CR1-D2 662 - 2761405 2761735 0 2 82,172, 0,158, -,-, 191968 LINE CR1 606 chr17 2769947 2770342 CR1-Y4 647 + 2769947 2770342 0 2 144,251, 0,144, +,+, 191974 LINE CR1 607 chr17 2907595 2907690 (CCGCG)n 316 + 2907595 2907690 0 2 24,24, 0,71, +,+, 192052 Simple_repeat Simple_repeat 607 chr17 2964629 2966141 CR1-C4 622 - 2964629 2966141 0 2 102,623, 0,889, -,-, 192101 LINE CR1 608 chr17 3017934 3018603 CR1-X1 428 + 3017934 3018603 0 2 175,50, 0,619, +,+, 192125 LINE CR1 608 chr17 3084034 3084467 CR1-X2 512 + 3084034 3084467 0 2 264,169, 0,264, +,+, 192171 LINE CR1 608 chr17 3130451 3130548 CR1-D 593 . 3130451 3130548 0 2 74,23, 0,74, -,+, 192207 LINE CR1 609 chr17 3207385 3207810 Mariner1b_GG 592 - 3207385 3207810 0 2 276,149, 0,276, -,-, 192246 DNA TcMar-Mariner 610 chr17 3343103 3343705 REP131 137 - 3343103 3343705 0 2 305,170, 0,432, -,-, 192292 DNA? DNA? 612 chr17 3580834 3581412 CR1-F2 463 - 3580834 3581412 0 2 133,105, 0,473, -,-, 192413 LINE CR1 613 chr17 3750802 3750917 (CTCTTC)n 294 + 3750802 3750917 0 2 10,18, 0,97, +,+, 192503 Simple_repeat Simple_repeat 613 chr17 3750812 3750899 (TTC)n 354 + 3750812 3750899 0 2 55,8, 0,79, +,+, 192504 Simple_repeat Simple_repeat 613 chr17 3754524 3754747 CR1-11_Crp 373 + 3754524 3754747 0 2 122,85, 0,138, +,+, 192509 LINE CR1 614 chr17 3858033 3858535 REP131 228 - 3858033 3858535 0 2 328,174, 0,328, -,-, 192568 DNA? DNA? 614 chr17 3916466 3916552 GA-rich 644 + 3916466 3916552 0 2 40,27, 0,59, +,+, 192594 Low_complexity Low_complexity 614 chr17 3929264 3929650 CR1-D2 479 - 3929264 3929650 0 2 238,142, 0,244, -,-, 192605 LINE CR1 615 chr17 3942020 3946752 CR1-F2 475 + 3942020 3946752 0 3 212,204,264, 0,3043,4468, +,+,+, 192616 LINE CR1 615 chr17 4051408 4052239 CR1-11_Crp 314 + 4051408 4052239 0 2 420,399, 0,432, +,+, 192695 LINE CR1 615 chr17 4060450 4061621 CR1-D2 673 + 4060450 4061621 0 2 687,484, 0,687, +,+, 192700 LINE CR1 616 chr17 4141508 4141722 CR1-C3 600 + 4141508 4141722 0 2 163,12, 0,202, +,+, 192740 LINE CR1 617 chr17 4215815 4217134 UCON84 392 + 4215815 4217134 0 3 125,86,323, 0,164,996, +,+,+, 192779 Unknown Unknown 617 chr17 4259931 4261566 CR1-H 553 + 4259931 4261566 0 4 200,826,33,509, 0,248,1074,1126, +,+,+,+, 192802 LINE CR1 618 chr17 4347518 4348724 CR1-L3B_Croc 261 - 4347518 4348724 0 2 522,131, 0,1075, -,-, 192836 LINE CR1 618 chr17 4351662 4352761 CR1-L3A_Croc 190 + 4351662 4352761 0 2 946,103, 0,996, +,+, 192841 LINE CR1 618 chr17 4380895 4381907 CR1-11_Crp 212 + 4380895 4381907 0 2 428,127, 0,885, +,+, 192860 LINE CR1 618 chr17 4413214 4414626 CR1-L3B_Croc 254 + 4413214 4414626 0 2 1015,163, 0,1249, +,+, 192878 LINE CR1 618 chr17 4454667 4454948 CR1-X1 542 - 4454667 4454948 0 2 98,180, 0,101, -,-, 192902 LINE CR1 619 chr17 4487589 4487823 GGLTR4A 675 + 4487589 4487823 0 2 164,64, 0,170, +,+, 192920 LTR ERVL 620 chr17 4596560 4596888 CR1-D2 554 + 4596560 4596888 0 2 148,180, 0,148, +,+, 192996 LINE CR1 622 chr17 4926881 4926973 (A)n 917 + 4926881 4926973 0 2 32,26, 0,66, +,+, 193203 Simple_repeat Simple_repeat 624 chr17 5159397 5163664 CR1-C2 594 - 5159397 5163664 0 2 242,126, 0,4141, -,-, 193297 LINE CR1 625 chr17 5263038 5263214 CR1-F2 477 + 5263038 5263214 0 2 88,53, 0,123, +,+, 193355 LINE CR1 626 chr17 5401106 5401203 (T)n 879 + 5401106 5401203 0 2 24,28, 0,69, +,+, 193400 Simple_repeat Simple_repeat 626 chr17 5434075 5434243 (CGCGC)n 420 + 5434075 5434243 0 2 48,36, 0,132, +,+, 193422 Simple_repeat Simple_repeat 626 chr17 5478868 5479245 (CATCC)n 485 + 5478868 5479245 0 2 179,198, 0,179, +,+, 193443 Simple_repeat Simple_repeat 628 chr17 5667993 5668043 (AGCGGC)n 398 + 5667993 5668043 0 2 10,14, 0,36, +,+, 193516 Simple_repeat Simple_repeat 628 chr17 5735366 5735628 Char12Mar1_GG 789 - 5735366 5735628 0 2 167,95, 0,167, -,-, 193540 DNA hAT-Charlie 629 chr17 5780409 5780467 (GCCCG)n 368 + 5780409 5780467 0 2 17,14, 0,44, +,+, 193556 Simple_repeat Simple_repeat 630 chr17 6002614 6002681 A-rich 308 + 6002614 6002681 0 2 14,28, 0,39, +,+, 193619 Low_complexity Low_complexity 631 chr17 6132089 6132276 CR1-H2 449 - 6132089 6132276 0 2 74,99, 0,88, -,-, 193707 LINE CR1 631 chr17 6150548 6150887 GGLTR3C2 593 - 6150548 6150887 0 2 60,279, 0,60, -,-, 193714 LTR ERVL 633 chr17 6349813 6349895 CR1-X1 370 + 6349813 6349895 0 2 26,18, 0,64, +,+, 193784 LINE CR1 633 chr17 6361103 6361157 (GGAGGTG)n 422 + 6361103 6361157 0 2 15,6, 0,48, +,+, 193796 Simple_repeat Simple_repeat 633 chr17 6375429 6376017 CR1-C 628 - 6375429 6376017 0 2 72,149, 0,439, -,-, 193815 LINE CR1 634 chr17 6436992 6437039 (GCCGGA)n 392 + 6436992 6437039 0 2 14,8, 0,39, +,+, 193845 Simple_repeat Simple_repeat 635 chr17 6610633 6610717 (TCC)n 876 + 6610633 6610717 0 2 26,27, 0,57, +,+, 193914 Simple_repeat Simple_repeat 638 chr17 6990745 6991310 GGLTR11 607 - 6990745 6991310 0 2 466,61, 0,504, -,-, 194063 LTR ERV1 643 chr17 7623177 7623236 (CCGCC)n 400 + 7623177 7623236 0 2 12,6, 0,53, +,+, 194328 Simple_repeat Simple_repeat 643 chr17 7689241 7689423 CR1-C2 241 + 7689241 7689423 0 2 61,23, 0,159, +,+, 194361 LINE CR1 646 chr17 8043261 8043628 CR1-Y4 565 + 8043261 8043628 0 2 225,142, 0,225, +,+, 194527 LINE CR1 646 chr17 8084492 8084578 (TTCTCCC)n 250 + 8084492 8084578 0 2 8,10, 0,76, +,+, 194552 Simple_repeat Simple_repeat 646 chr17 8084615 8084688 (CCGCT)n 396 + 8084615 8084688 0 2 6,32, 0,41, +,+, 194554 Simple_repeat Simple_repeat 655 chr17 9247820 9248006 G-rich 489 + 9247820 9248006 0 2 63,66, 0,120, +,+, 194975 Low_complexity Low_complexity 661 chr17 9990224 9991332 CR1-C3 176 - 9990224 9991332 0 2 692,220, 0,888, -,-, 195274 LINE CR1 664 chr17 10449969 10450318 CR1-C4 573 + 10449969 10450318 0 2 96,253, 0,96, +,+, 195442 LINE CR1 667 chr17 10758979 10760067 CR1-X 317 - 10758979 10760067 0 3 531,347,210, 0,531,878, -,-,-, 195591 LINE CR1 668 chr17 10907008 10907443 CR1-Y1_Aves 419 + 10907008 10907443 0 2 326,84, 0,351, +,+, 195690 LINE CR1 585 chr17_NT_462569v1_random 9966 10596 CR1-H 650 - 9966 10596 0 2 141,483, 0,147, -,-, 195730 LINE CR1 585 chr17_NT_462569v1_random 12739 13690 CR1-H 524 - 12739 13690 0 2 117,834, 0,117, -,-, 195733 LINE CR1 585 chr17_NT_462569v1_random 24165 28048 CR1-H 638 - 24165 28048 0 5 139,475,113,412,685, 0,145,2652,2765,3198, -,-,-,-,-, 195742 LINE CR1 585 chr17_NT_462569v1_random 39317 39942 CR1-H 676 - 39317 39942 0 2 140,479, 0,146, -,-, 195756 LINE CR1 585 chr17_NT_462569v1_random 42495 43766 CR1-H 598 - 42495 43766 0 2 117,1154, 0,117, -,-, 195760 LINE CR1 585 chr17_NT_462570v1_random 4555 5180 CR1-H 663 - 4555 5180 0 2 140,479, 0,146, -,-, 195775 LINE CR1 585 chr17_NT_462570v1_random 7715 8168 CR1-H 653 - 7715 8168 0 2 160,293, 0,160, -,-, 195779 LINE CR1 585 chr17_NT_462570v1_random 18458 19081 CR1-H 683 - 18458 19081 0 2 139,478, 0,145, -,-, 195790 LINE CR1 585 chr17_NT_462570v1_random 22298 22755 CR1-H 677 - 22298 22755 0 2 163,294, 0,163, -,-, 195794 LINE CR1 585 chr17_NT_462571v1_random 13901 14528 CR1-H 686 - 13901 14528 0 2 139,469, 0,158, -,-, 195818 LINE CR1 585 chr17_NT_462571v1_random 16643 17099 CR1-H 672 - 16643 17099 0 2 162,294, 0,162, -,-, 195822 LINE CR1 585 chr17_NT_462571v1_random 27620 28235 CR1-H 571 - 27620 28235 0 2 131,460, 0,155, -,-, 195831 LINE CR1 585 chr17_NT_462571v1_random 30037 30450 CR1-H 663 - 30037 30450 0 2 162,251, 0,162, -,-, 195835 LINE CR1 585 chr17_NT_462572v1_random 2082 2711 CR1-H 665 - 2082 2711 0 2 139,484, 0,145, -,-, 195837 LINE CR1 585 chr17_NT_462572v1_random 6191 6648 CR1-H 677 - 6191 6648 0 2 163,294, 0,163, -,-, 195841 LINE CR1 585 chr17_NT_462572v1_random 20051 20674 CR1-H 683 - 20051 20674 0 2 139,478, 0,145, -,-, 195857 LINE CR1 585 chr17_NT_462574v1_random 8804 9431 CR1-H 692 - 8804 9431 0 2 139,469, 0,158, -,-, 195888 LINE CR1 585 chr17_NT_462574v1_random 11288 12557 CR1-H 583 - 11288 12557 0 2 115,1154, 0,115, -,-, 195892 LINE CR1 585 chr17_NT_462575v1_random 3015 4283 CR1-H 546 - 3015 4283 0 2 111,1157, 0,111, -,-, 195904 LINE CR1 585 chr17_NT_462575v1_random 18013 18619 CR1-H 620 - 18013 18619 0 2 135,465, 0,141, -,-, 195912 LINE CR1 585 chr17_NT_462576v1_random 5405 5862 CR1-H 677 - 5405 5862 0 2 163,294, 0,163, -,-, 195918 LINE CR1 585 chr17_NT_462576v1_random 16038 19353 CR1-H 615 - 16038 19353 0 3 442,161,296, 0,2858,3019, -,-,-, 195926 LINE CR1 585 chr17_NT_462577v1_random 14093 17777 CR1-H 630 + 14093 17777 0 4 1154,111,365,110, 0,1154,3190,3574, +,+,+,+, 195942 LINE CR1 585 chr17_NT_462578v1_random 1594 2047 CR1-H 643 - 1594 2047 0 2 161,292, 0,161, -,-, 195947 LINE CR1 585 chr17_NT_462578v1_random 12212 12834 CR1-H 683 - 12212 12834 0 2 139,477, 0,145, -,-, 195955 LINE CR1 585 chr17_NT_462578v1_random 16243 16549 CR1-H 724 - 16243 16549 0 2 67,216, 0,90, -,-, 195959 LINE CR1 585 chr17_NT_462579v1_random 11137 11755 CR1-H 676 - 11137 11755 0 2 139,473, 0,145, -,-, 195972 LINE CR1 585 chr17_NT_462579v1_random 14295 14752 CR1-H 582 - 14295 14752 0 2 171,286, 0,171, -,-, 195976 LINE CR1 585 chr17_NT_462581v1_random 3157 3779 CR1-H 668 + 3157 3779 0 2 478,138, 0,484, +,+, 195984 LINE CR1 585 chr17_NT_462582v1_random 12078 12526 CR1-H 627 + 12078 12526 0 2 291,157, 0,291, +,+, 196006 LINE CR1 585 chr17_NT_462584v1_random 11165 11783 CR1-H 668 - 11165 11783 0 2 139,460, 0,158, -,-, 196033 LINE CR1 585 chr17_NT_462586v1_random 4765 5388 CR1-H 677 - 4765 5388 0 2 139,478, 0,145, -,-, 196044 LINE CR1 585 chr17_NT_462586v1_random 7571 8027 CR1-H 681 - 7571 8027 0 2 160,296, 0,160, -,-, 196048 LINE CR1 585 chr17_NT_462586v1_random 11584 11703 (TTTTC)n 304 + 11584 11703 0 2 85,7, 0,112, +,+, 196052 Simple_repeat Simple_repeat 585 chr17_NT_462587v1_random 2401 3756 CR1-H 670 - 2401 3756 0 2 117,1238, 0,117, -,-, 196059 LINE CR1 585 chr17_NT_462589v1_random 1329 1951 CR1-H 685 - 1329 1951 0 2 138,465, 0,157, -,-, 196073 LINE CR1 585 chr17_NT_462589v1_random 3743 5010 CR1-H 565 - 3743 5010 0 2 115,1152, 0,115, -,-, 196077 LINE CR1 585 chr17_NT_462591v1_random 2690 3313 CR1-H 678 + 2690 3313 0 2 478,139, 0,484, +,+, 196089 LINE CR1 585 chr17_NT_462592v1_random 2475 3096 CR1-H 681 - 2475 3096 0 2 139,476, 0,145, -,-, 196096 LINE CR1 585 chr17_NT_462592v1_random 5520 5965 CR1-H 573 - 5520 5965 0 2 155,290, 0,155, -,-, 196100 LINE CR1 585 chr17_NT_462593v1_random 5662 7016 CR1-H 649 + 5662 7016 0 2 1242,112, 0,1242, +,+, 196111 LINE CR1 585 chr17_NT_462593v1_random 9266 9894 CR1-H 567 + 9266 9894 0 2 478,144, 0,484, +,+, 196116 LINE CR1 585 chr17_NT_462594v1_random 4983 9185 CR1-H 503 + 4983 9185 0 3 1155,111,198, 0,1155,4004, +,+,+, 196122 LINE CR1 585 chr17_NT_462597v1_random 6000 6569 CR1-H 518 - 6000 6569 0 2 140,427, 0,142, -,-, 196142 LINE CR1 585 chr17_NT_462601v1_random 3845 4308 CR1-H 653 + 3845 4308 0 2 300,163, 0,300, +,+, 196155 LINE CR1 585 chr17_NT_462605v1_random 4431 4541 (TTTGC)n 308 + 4431 4541 0 2 61,9, 0,101, +,+, 196184 Simple_repeat Simple_repeat 585 chr17_NT_462610v1_random 1591 2204 CR1-H 443 - 1591 2204 0 2 118,484, 0,129, -,-, 196208 LINE CR1 585 chr17_NT_462610v1_random 4420 5781 CR1-H 654 - 4420 5781 0 2 117,1244, 0,117, -,-, 196212 LINE CR1 585 chr17_NT_462612v1_random 2087 2600 CR1-H 767 - 2087 2600 0 2 43,464, 0,49, -,-, 196221 LINE CR1 585 chr17_NT_462612v1_random 5728 6173 CR1-H 600 - 5728 6173 0 2 150,295, 0,150, -,-, 196224 LINE CR1 585 chr17_NT_462616v1_random 3586 4677 CR1-X 322 - 3586 4677 0 3 534,347,210, 0,534,881, -,-,-, 196236 LINE CR1 585 chr18 4447 5074 CR1-H 692 + 4447 5074 0 2 469,139, 0,488, +,+, 196304 LINE CR1 585 chr18 16716 17172 CR1-H 672 + 16716 17172 0 2 296,160, 0,296, +,+, 196318 LINE CR1 585 chr18 43030 45445 GGLTR3F1 954 + 43030 45445 0 2 1921,494, 0,1921, +,+, 196327 LTR ERVL 585 chr18 65121 66520 CR1-D 716 + 65121 66520 0 4 158,73,591,218, 0,158,590,1181, +,+,+,+, 196341 LINE CR1 585 chr18 66522 67043 CR1-C4 544 + 66522 67043 0 2 228,281, 0,240, +,+, 196343 LINE CR1 585 chr18 72570 74308 GGLTR7B 309 - 72570 74308 0 4 157,79,155,161, 0,519,1384,1577, -,-,-,-, 196345 LTR ERV1 585 chr18 74872 75470 GGLTR7-int 251 + 74872 75470 0 2 79,157, 0,441, +,+, 196350 LTR ERV1 585 chr18 77951 79708 GGLTR7A 874 + 77951 79708 0 4 596,442,147,210, 0,597,1400,1547, +,+,+,+, 196355 LTR ERV1 585 chr18 83063 83442 GGLTR3E3 748 + 83063 83442 0 2 242,137, 0,242, +,+, 196356 LTR ERVL 585 chr18 84997 87391 GGERVL-A-int 579 - 84997 87391 0 3 1183,702,219, 0,1191,2175, -,-,-, 196358 LTR ERVL 585 chr18 97305 99160 GGERVL18-int 654 - 97305 99160 0 2 347,1507, 0,348, -,-, 196367 LTR ERVL 585 chr18 102202 104152 CR1-X 557 + 102202 104152 0 2 711,1239, 0,711, +,+, 196369 LINE CR1 585 chr18 104531 105012 CR1-X2 399 + 104531 105012 0 2 257,209, 0,272, +,+, 196371 LINE CR1 585 chr18 110766 111732 CR1-E 626 + 110766 111732 0 2 414,552, 0,414, +,+, 196375 LINE CR1 585 chr18 111764 112382 CR1-C4 510 + 111764 112382 0 2 367,251, 0,367, +,+, 196376 LINE CR1 585 chr18 115142 120868 CR1-C 800 - 115142 120868 0 2 2479,1243, 0,4483, -,-, 196379 LINE CR1 586 chr18 148992 150567 CR1-X2 530 + 148992 150567 0 3 279,954,232, 0,349,1343, +,+,+, 196399 LINE CR1 586 chr18 159441 159586 GGLTR5B 708 + 159441 159586 0 2 99,43, 0,102, +,+, 196407 LTR ERVL 586 chr18 194017 194226 CR1-X2 514 - 194017 194226 0 2 51,87, 0,122, -,-, 196442 LINE CR1 586 chr18 205463 206764 CR1-D2 612 - 205463 206764 0 2 261,874, 0,427, -,-, 196457 LINE CR1 586 chr18 220714 221941 CR1-B 968 + 220714 221941 0 2 1167,60, 0,1167, +,+, 196465 LINE CR1 586 chr18 244479 245635 Charlie12_GG 583 - 244479 245635 0 3 330,101,458, 0,590,698, -,-,-, 196473 DNA hAT-Charlie 587 chr18 273966 274190 CR1-C4 733 + 273966 274190 0 2 145,79, 0,145, +,+, 196495 LINE CR1 587 chr18 276449 276811 CR1-E 460 - 276449 276811 0 2 78,282, 0,80, -,-, 196498 LINE CR1 587 chr18 278310 278957 GGLTR3G2 252 + 278310 278957 0 2 348,268, 0,379, +,+, 196499 LTR ERVL 587 chr18 285307 286028 GGERVL-B-int 379 + 285307 286028 0 3 92,241,256, 0,221,465, +,+,+, 196502 LTR ERVL 587 chr18 286045 286928 GGLTR5B 272 + 286045 286928 0 2 201,169, 0,714, +,+, 196504 LTR ERVL 73 chr18 392688 396446 CR1-X2 463 + 392688 396446 0 2 249,262, 0,3496, +,+, 196565 LINE CR1 588 chr18 401093 402606 CR1-F2 283 - 401093 402606 0 2 850,663, 0,850, -,-, 196569 LINE CR1 588 chr18 454097 464222 Char12Mar1_GG 633 - 454097 464222 0 2 578,463, 0,9662, -,-, 196600 DNA hAT-Charlie 588 chr18 454857 456538 CR1-Y2_Aves 175 - 454857 456538 0 2 444,733, 0,948, -,-, 196601 LINE CR1 588 chr18 455457 455787 GGERV10_LTR 805 + 455457 455787 0 2 71,150, 0,180, +,+, 196603 LTR ERVL 588 chr18 456531 457687 CR1-Y4 503 - 456531 457687 0 3 98,653,405, 0,98,751, -,-,-, 196604 LINE CR1 588 chr18 468249 472097 CR1-Y2 290 + 468249 472097 0 2 171,497, 0,3351, +,+, 196619 LINE CR1 588 chr18 502354 504216 CR1-Y2_Aves 324 + 502354 504216 0 2 61,651, 0,1211, +,+, 196646 LINE CR1 588 chr18 504212 505255 CR1-Y1_Aves 265 + 504212 505255 0 2 399,104, 0,939, +,+, 196649 LINE CR1 588 chr18 513154 514353 CR1-C4 448 + 513154 514353 0 2 324,866, 0,333, +,+, 196658 LINE CR1 589 chr18 558736 559031 CR1-X2 339 + 558736 559031 0 2 118,173, 0,122, +,+, 196691 LINE CR1 589 chr18 559369 560107 CR1-X2 488 - 559369 560107 0 2 535,202, 0,536, -,-, 196693 LINE CR1 589 chr18 566632 567764 GGERV20_I-int 944 + 566632 567764 0 4 104,501,307,220, 0,104,605,912, +,+,+,+, 196698 LTR ERVL 589 chr18 570334 571151 CR1-H 372 + 570334 571151 0 2 625,192, 0,625, +,+, 196702 LINE CR1 589 chr18 575147 576748 CR1-X2 477 + 575147 576748 0 3 495,136,659, 0,533,942, +,+,+, 196708 LINE CR1 589 chr18 584911 588032 GGERVL-B-int 318 + 584911 588032 0 4 272,182,558,544, 0,1825,2007,2577, +,+,+,+, 196714 LTR ERVL 589 chr18 624284 625458 CR1-X2 551 - 624284 625458 0 2 166,449, 0,725, -,-, 196734 LINE CR1 591 chr18 794627 796783 GGERVL-B-int 720 - 794627 796783 0 3 524,81,1551, 0,524,605, -,-,-, 196808 LTR ERVL 591 chr18 810799 811365 CR1-F2 679 - 810799 811365 0 2 176,372, 0,194, -,-, 196814 LINE CR1 591 chr18 886587 886973 CR1-11_Crp 244 - 886587 886973 0 2 197,121, 0,265, -,-, 196845 LINE CR1 592 chr18 922723 923147 CR1-D2 539 - 922723 923147 0 2 157,258, 0,166, -,-, 196861 LINE CR1 592 chr18 933487 934207 CR1-F2 559 + 933487 934207 0 2 167,424, 0,296, +,+, 196866 LINE CR1 592 chr18 938667 939191 CR1-F2 399 - 938667 939191 0 2 348,176, 0,348, -,-, 196869 LINE CR1 592 chr18 1040435 1041626 CR1-L3A_Croc 377 + 1040435 1041626 0 2 473,718, 0,473, +,+, 196908 LINE CR1 593 chr18 1078979 1080010 GGERVL-A-int 305 - 1078979 1080010 0 2 224,807, 0,224, -,-, 196933 LTR ERVL 593 chr18 1104619 1105139 GGLTR8B 518 - 1104619 1105139 0 2 168,352, 0,168, -,-, 196941 LTR ERVL 594 chr18 1205813 1206341 CR1-Y1_Aves 539 - 1205813 1206341 0 2 51,122, 0,406, -,-, 196982 LINE CR1 594 chr18 1225571 1226341 CR1-8_Crp 170 + 1225571 1226341 0 2 288,246, 0,524, +,+, 196992 LINE CR1 594 chr18 1229578 1230023 CR1-Y4 551 + 1229578 1230023 0 2 274,171, 0,274, +,+, 196996 LINE CR1 594 chr18 1265412 1266336 CR1-L3B_Croc 331 + 1265412 1266336 0 2 72,208, 0,716, +,+, 197009 LINE CR1 594 chr18 1277467 1278175 CR1-L3B_Croc 229 - 1277467 1278175 0 2 92,264, 0,444, -,-, 197023 LINE CR1 595 chr18 1399259 1399514 CR1-Y2_Aves 273 + 1399259 1399514 0 2 100,115, 0,140, +,+, 197101 LINE CR1 595 chr18 1441085 1441306 CR1-C4 678 + 1441085 1441306 0 2 154,67, 0,154, +,+, 197123 LINE CR1 597 chr18 1575143 1575338 CR1-F2 562 + 1575143 1575338 0 2 116,79, 0,116, +,+, 197184 LINE CR1 597 chr18 1611113 1611256 CR1-Y4 604 - 1611113 1611256 0 2 87,56, 0,87, -,-, 197203 LINE CR1 597 chr18 1612050 1612758 GGLTR5A 284 - 1612050 1612758 0 2 118,263, 0,445, -,-, 197204 LTR ERVL 597 chr18 1627425 1628383 CR1-C4 691 - 1627425 1628383 0 2 59,81, 0,877, -,-, 197212 LINE CR1 597 chr18 1670237 1674034 CR1-Y2_Aves 99 - 1670237 1674034 0 2 204,356, 0,3441, -,-, 197231 LINE CR1 597 chr18 1680235 1680712 CR1-H2 573 + 1680235 1680712 0 2 360,117, 0,360, +,+, 197237 LINE CR1 597 chr18 1684833 1685225 Char12Mar1_GG 546 - 1684833 1685225 0 2 301,91, 0,301, -,-, 197242 DNA hAT-Charlie 598 chr18 1720705 1720909 CR1-Y4 389 - 1720705 1720909 0 2 119,85, 0,119, -,-, 197261 LINE CR1 598 chr18 1802316 1802792 CR1-F2 483 + 1802316 1802792 0 2 152,324, 0,152, +,+, 197285 LINE CR1 599 chr18 1867475 1868917 CR1-F2 359 + 1867475 1868917 0 3 188,91,102, 0,1244,1340, +,+,+, 197299 LINE CR1 599 chr18 1870255 1873799 GGERVL-C-int 587 + 1870255 1873799 0 2 61,218, 0,3326, +,+, 197302 LTR ERVL 599 chr18 1883231 1884126 GGERVL-A-int 595 + 1883231 1884126 0 3 57,190,128, 0,517,767, +,+,+, 197310 LTR ERVL 599 chr18 1887802 1888694 GGERVL-B-int 579 + 1887802 1888694 0 3 61,233,128, 0,514,764, +,+,+, 197313 LTR ERVL 599 chr18 1906021 1912162 GGERVL-C-int 649 + 1906021 1912162 0 2 226,128, 0,6013, +,+, 197326 LTR ERVL 599 chr18 1911266 1911981 GGERVL-C-int 470 + 1911266 1911981 0 2 61,197, 0,518, +,+, 197329 LTR ERVL 599 chr18 1916038 1916931 GGERVL-B-int 601 + 1916038 1916931 0 3 61,196,128, 0,509,765, +,+,+, 197332 LTR ERVL 599 chr18 1921614 1922511 GGERVL-B-int 621 + 1921614 1922511 0 3 61,196,128, 0,513,769, +,+,+, 197336 LTR ERVL 599 chr18 1934800 1935511 GGERVL-C-int 475 + 1934800 1935511 0 2 58,233, 0,478, +,+, 197347 LTR ERVL 599 chr18 1947428 1948319 GGERVL-A-int 611 + 1947428 1948319 0 3 61,190,128, 0,513,763, +,+,+, 197359 LTR ERVL 601 chr18 2150122 2151176 CR1-F2 492 + 2150122 2151176 0 2 708,108, 0,946, +,+, 197484 LINE CR1 603 chr18 2380272 2381139 CR1-C4 617 - 2380272 2381139 0 2 183,684, 0,183, -,-, 197587 LINE CR1 604 chr18 2573838 2577289 CR1-F0 517 - 2573838 2577289 0 2 14,143, 0,3308, -,-, 197692 LINE CR1 605 chr18 2631329 2631614 CR1-F2 374 + 2631329 2631614 0 2 21,94, 0,191, +,+, 197723 LINE CR1 605 chr18 2750036 2750375 GGLTR5B 756 + 2750036 2750375 0 2 249,90, 0,249, +,+, 197784 LTR ERVL 607 chr18 2940500 2941710 CR1-L3A_Croc 243 - 2940500 2941710 0 3 225,127,264, 0,555,946, -,-,-, 197914 LINE CR1 608 chr18 3038125 3042156 CR1-F2 330 + 3038125 3042156 0 2 110,208, 0,3823, +,+, 197967 LINE CR1 608 chr18 3039347 3039703 GGLTR4A 642 - 3039347 3039703 0 2 99,223, 0,133, -,-, 197969 LTR ERVL 610 chr18 3376731 3377125 CR1-Y2_Aves 250 - 3376731 3377125 0 2 77,135, 0,259, -,-, 198088 LINE CR1 612 chr18 3553973 3554184 (GCG)n 328 + 3553973 3554184 0 2 14,87, 0,124, +,+, 198171 Simple_repeat Simple_repeat 612 chr18 3600456 3600741 CR1-D2 713 + 3600456 3600741 0 2 57,34, 0,251, +,+, 198189 LINE CR1 614 chr18 3926596 3929179 CR1-F2 455 + 3926596 3929179 0 2 332,113, 0,2470, +,+, 198360 LINE CR1 616 chr18 4089507 4089976 CR1-C4 636 - 4089507 4089976 0 3 55,348,66, 0,55,403, -,-,-, 198465 LINE CR1 617 chr18 4224496 4227053 GGERV28_I-int 177 - 4224496 4227053 0 3 1582,173,504, 0,1609,2053, -,-,-, 198535 LTR ERVK 617 chr18 4234060 4234150 CR1-F2 572 + 4234060 4234150 0 2 46,41, 0,49, +,+, 198542 LINE CR1 619 chr18 4510047 4510190 (T)n 633 + 4510047 4510190 0 2 32,59, 0,84, +,+, 198662 Simple_repeat Simple_repeat 622 chr18 4941850 4944526 CR1-F2 416 + 4941850 4944526 0 2 571,81, 0,2595, +,+, 198844 LINE CR1 622 chr18 4960006 4960923 CR1-C4 529 - 4960006 4960923 0 2 575,342, 0,575, -,-, 198860 LINE CR1 623 chr18 5004530 5005567 CR1-D2 466 + 5004530 5005567 0 2 526,511, 0,526, +,+, 198886 LINE CR1 625 chr18 5263558 5264058 GGLTR5A 391 + 5263558 5264058 0 2 256,134, 0,366, +,+, 198981 LTR ERVL 626 chr18 5452576 5453067 LFSINE_Vert 339 - 5452576 5453067 0 2 66,111, 0,380, -,-, 199025 SINE tRNA 630 chr18 6016952 6018377 GGERVL18-int 494 + 6016952 6018377 0 2 1090,335, 0,1090, +,+, 199181 LTR ERVL 634 chr18 6512177 6513168 CR1-11_Crp 0 - 6512177 6513168 0 2 356,192, 0,799, -,-, 199337 LINE CR1 636 chr18 6720477 6720992 CR1-Y4 482 - 6720477 6720992 0 2 59,452, 0,63, -,-, 199399 LINE CR1 641 chr18 7346983 7347052 (GGAGGC)n 334 + 7346983 7347052 0 2 18,21, 0,48, +,+, 199618 Simple_repeat Simple_repeat 643 chr18 7680697 7681053 CR1-D2 134 - 7680697 7681053 0 2 154,202, 0,154, -,-, 199736 LINE CR1 643 chr18 7724712 7724847 CR1-H 550 + 7724712 7724847 0 2 69,49, 0,86, +,+, 199769 LINE CR1 646 chr18 8043224 8043731 CR1-C4 495 + 8043224 8043731 0 2 172,91, 0,416, +,+, 199906 LINE CR1 646 chr18 8045400 8045617 CR1-F2 590 - 8045400 8045617 0 3 62,60,63, 0,78,154, -,-,-, 199909 LINE CR1 646 chr18 8052445 8052568 (GCGCC)n 344 + 8052445 8052568 0 2 39,55, 0,68, +,+, 199915 Simple_repeat Simple_repeat 646 chr18 8059233 8064299 CR1-F2 329 - 8059233 8064299 0 2 242,301, 0,4765, -,-, 199924 LINE CR1 650 chr18 8555909 8559371 CR1-F2 556 + 8555909 8559371 0 2 171,47, 0,3415, +,+, 200128 LINE CR1 651 chr18 8747635 8748020 Charlie12_GGa 580 - 8747635 8748020 0 2 216,169, 0,216, -,-, 200225 DNA hAT-Charlie 653 chr18 9032078 9032814 CR1-F2 427 - 9032078 9032814 0 2 407,329, 0,407, -,-, 200375 LINE CR1 654 chr18 9071183 9071755 CR1-C4 388 + 9071183 9071755 0 2 177,381, 0,191, +,+, 200393 LINE CR1 655 chr18 9180041 9180154 (CATCC)n 462 + 9180041 9180154 0 2 9,62, 0,51, +,+, 200441 Simple_repeat Simple_repeat 655 chr18 9280150 9280234 (G)n 773 + 9280150 9280234 0 2 24,24, 0,60, +,+, 200492 Simple_repeat Simple_repeat 656 chr18 9306472 9306545 (TCTT)n 476 + 9306472 9306545 0 2 22,9, 0,64, +,+, 200531 Simple_repeat Simple_repeat 656 chr18 9308196 9308299 A-rich 555 + 9308196 9308299 0 2 52,32, 0,71, +,+, 200540 Low_complexity Low_complexity 657 chr18 9526485 9530506 CR1-F2 358 - 9526485 9530506 0 2 221,227, 0,3794, -,-, 200643 LINE CR1 658 chr18 9666057 9666609 CR1-D2 444 - 9666057 9666609 0 2 91,457, 0,95, -,-, 200700 LINE CR1 658 chr18 9670486 9670904 CR1-F2 300 - 9670486 9670904 0 2 261,157, 0,261, -,-, 200701 LINE CR1 659 chr18 9715533 9715650 (T)n 598 + 9715533 9715650 0 2 39,29, 0,88, +,+, 200755 Simple_repeat Simple_repeat 661 chr18 9968011 9968348 GGLTR5A 480 - 9968011 9968348 0 2 106,83, 0,254, -,-, 200929 LTR ERVL 663 chr18 10321483 10322804 UCON27 404 - 10321483 10322804 0 2 164,230, 0,1091, -,-, 201062 Unknown Unknown 664 chr18 10468449 10468496 (CATCCC)n 452 + 10468449 10468496 0 2 8,11, 0,36, +,+, 201124 Simple_repeat Simple_repeat 666 chr18 10723414 10723505 (GCG)n 342 + 10723414 10723505 0 2 11,39, 0,52, +,+, 201212 Simple_repeat Simple_repeat 667 chr18 10748441 10748566 CR1-F2 311 + 10748441 10748566 0 2 84,41, 0,84, +,+, 201218 LINE CR1 667 chr18 10792977 10793626 CR1-F2 554 - 10792977 10793626 0 2 347,302, 0,347, -,-, 201242 LINE CR1 668 chr18 10905321 10906816 CR1-L3A_Croc 110 - 10905321 10906816 0 2 530,307, 0,1188, -,-, 201294 LINE CR1 669 chr18 11045467 11047435 CR1-C 591 - 11045467 11047435 0 2 837,423, 0,1545, -,-, 201332 LINE CR1 669 chr18 11048474 11051854 GGLTR10C1 877 + 11048474 11051854 0 3 363,2656,361, 0,363,3019, +,+,+, 201336 LTR ERVK 585 chr18_NT_462655v1_random 12992 13483 Char12Mar1_GG 489 - 12992 13483 0 2 143,336, 0,155, -,-, 201353 DNA hAT-Charlie 585 chr18_NT_462689v1_random 404 1702 GGERVL-B-int 365 + 404 1702 0 3 182,559,545, 0,182,753, +,+,+, 201464 LTR ERVL 585 chr19 69952 70739 CR1-D2 611 + 69952 70739 0 2 505,276, 0,511, +,+, 201560 LINE CR1 585 chr19 101587 102692 CR1-C4 349 - 101587 102692 0 2 848,248, 0,857, -,-, 201582 LINE CR1 585 chr19 126941 127349 GGLTR8B 540 + 126941 127349 0 2 89,319, 0,89, +,+, 201601 LTR ERVL 586 chr19 133515 134310 CR1-C3 483 - 133515 134310 0 2 196,583, 0,212, -,-, 201605 LINE CR1 586 chr19 146741 147029 CR1-X2 485 + 146741 147029 0 2 97,191, 0,97, +,+, 201618 LINE CR1 586 chr19 157637 158040 (TTAGGG)n 602 + 157637 158040 0 2 201,188, 0,215, +,+, 201623 Simple_repeat Simple_repeat 586 chr19 158126 158436 (TTAGGG)n 582 + 158126 158436 0 2 99,28, 0,282, +,+, 201625 Simple_repeat Simple_repeat 586 chr19 196339 196691 GGLTR8B 484 - 196339 196691 0 2 133,89, 0,263, -,-, 201650 LTR ERVL 586 chr19 206591 207239 CR1-F2 487 - 206591 207239 0 2 453,195, 0,453, -,-, 201656 LINE CR1 586 chr19 232397 234385 CR1-C4 308 + 232397 234385 0 2 543,750, 0,1238, +,+, 201666 LINE CR1 586 chr19 232952 233637 CR1-F2 297 - 232952 233637 0 3 72,210,396, 0,79,289, -,-,-, 201667 LINE CR1 587 chr19 381085 381731 CR1-F2 490 + 381085 381731 0 2 542,92, 0,554, +,+, 201723 LINE CR1 587 chr19 389414 389466 (TTCTTT)n 600 + 389414 389466 0 2 11,14, 0,38, +,+, 201733 Simple_repeat Simple_repeat 588 chr19 406408 409045 CR1-F2 454 - 406408 409045 0 2 93,181, 0,2456, -,-, 201754 LINE CR1 588 chr19 508922 509311 (CTGTG)n 746 + 508922 509311 0 2 193,17, 0,372, +,+, 201802 Simple_repeat Simple_repeat 590 chr19 710351 710522 CR1-Y1_Aves 603 - 710351 710522 0 2 59,112, 0,59, -,-, 201900 LINE CR1 590 chr19 736464 737188 CR1-11_Crp 352 + 736464 737188 0 2 207,92, 0,632, +,+, 201917 LINE CR1 590 chr19 744448 744733 CR1-C4 623 - 744448 744733 0 2 143,142, 0,143, -,-, 201922 LINE CR1 591 chr19 875087 875322 CR1-X1 595 + 875087 875322 0 2 76,159, 0,76, +,+, 201985 LINE CR1 591 chr19 877255 877391 CR1-Y4 711 - 877255 877391 0 2 42,94, 0,42, -,-, 201987 LINE CR1 593 chr19 1059193 1059762 CR1-Y4 438 - 1059193 1059762 0 2 314,255, 0,314, -,-, 202098 LINE CR1 594 chr19 1208438 1208665 CR1-13_AMi 473 + 1208438 1208665 0 2 104,98, 0,129, +,+, 202168 LINE CR1 594 chr19 1304302 1305199 CR1-C4 589 + 1304302 1305199 0 2 367,530, 0,367, +,+, 202209 LINE CR1 597 chr19 1598765 1599176 CR1-F2 356 - 1598765 1599176 0 2 36,261, 0,150, -,-, 202340 LINE CR1 597 chr19 1636811 1637136 UCON65 426 - 1636811 1637136 0 2 104,187, 0,138, -,-, 202358 Unknown Unknown 598 chr19 1781793 1782241 CR1-D 892 + 1781793 1782241 0 2 37,37, 0,411, +,+, 202426 LINE CR1 599 chr19 1886210 1886426 CR1-C3 415 + 1886210 1886426 0 2 174,42, 0,174, +,+, 202481 LINE CR1 600 chr19 2022831 2026535 CR1-F2 567 - 2022831 2026535 0 2 244,101, 0,3603, -,-, 202547 LINE CR1 601 chr19 2101988 2102643 CR1-Y4 551 - 2101988 2102643 0 2 348,307, 0,348, -,-, 202593 LINE CR1 601 chr19 2225622 2226026 CR1-11_Crp 203 - 2225622 2226026 0 2 137,149, 0,255, -,-, 202651 LINE CR1 602 chr19 2264679 2264985 CR1-Y4 611 + 2264679 2264985 0 2 73,233, 0,73, +,+, 202666 LINE CR1 603 chr19 2415251 2416295 Char12Mar1_GG 620 - 2415251 2416295 0 2 84,64, 0,980, -,-, 202732 DNA hAT-Charlie 603 chr19 2415981 2416230 Char12Mar1_GG 597 - 2415981 2416230 0 2 135,112, 0,137, -,-, 202733 DNA hAT-Charlie 603 chr19 2419277 2419865 CR1-Y2_Aves 298 - 2419277 2419865 0 2 75,504, 0,84, -,-, 202735 LINE CR1 606 chr19 2777923 2787162 Char12Mar1_GG 593 - 2777923 2787162 0 2 59,290, 0,8949, -,-, 202929 DNA hAT-Charlie 608 chr19 3042293 3042771 CR1-L3B_Croc 290 + 3042293 3042771 0 2 91,338, 0,140, +,+, 203017 LINE CR1 608 chr19 3046738 3048311 CR1-L3A_Croc 164 + 3046738 3048311 0 4 276,503,141,123, 0,594,1238,1450, +,+,+,+, 203018 LINE CR1 609 chr19 3243497 3243609 (TTTTCTT)n 154 + 3243497 3243609 0 2 24,63, 0,49, +,+, 203078 Simple_repeat Simple_repeat 609 chr19 3266783 3267156 CR1-H2 236 + 3266783 3267156 0 2 127,235, 0,138, +,+, 203101 LINE CR1 610 chr19 3385295 3385577 CR1-F2 361 - 3385295 3385577 0 2 217,65, 0,217, -,-, 203135 LINE CR1 611 chr19 3451430 3452293 CR1-Y 243 + 3451430 3452293 0 2 600,263, 0,600, +,+, 203157 LINE CR1 611 chr19 3519231 3519698 CR1-X2 457 - 3519231 3519698 0 2 247,193, 0,274, -,-, 203187 LINE CR1 613 chr19 3791197 3791982 CR1-Y4 572 - 3791197 3791982 0 2 345,440, 0,345, -,-, 203313 LINE CR1 614 chr19 3852352 3852464 (C)n 786 + 3852352 3852464 0 2 25,26, 0,86, +,+, 203354 Simple_repeat Simple_repeat 614 chr19 3915200 3915401 CR1-F0 494 - 3915200 3915401 0 2 82,100, 0,101, -,-, 203394 LINE CR1 614 chr19 3915282 3916152 CR1-F2 187 - 3915282 3916152 0 2 19,284, 0,586, -,-, 203395 LINE CR1 616 chr19 4149350 4149633 (ACCCCATAGGG)n 427 + 4149350 4149633 0 2 130,132, 0,151, +,+, 203500 Satellite Satellite 616 chr19 4187811 4188800 CR1-X2 431 - 4187811 4188800 0 2 135,194, 0,795, -,-, 203520 LINE CR1 617 chr19 4221451 4222389 CR1-F2 338 + 4221451 4222389 0 2 134,198, 0,740, +,+, 203550 LINE CR1 619 chr19 4567313 4567950 AmnSINE1 294 - 4567313 4567950 0 2 193,86, 0,551, -,-, 203690 SINE 5S-Deu-L2 620 chr19 4650402 4651223 CR1-11_Crp 128 - 4650402 4651223 0 2 261,172, 0,649, -,-, 203715 LINE CR1 620 chr19 4680314 4680622 CR1-8_Crp 286 + 4680314 4680622 0 2 130,139, 0,169, +,+, 203737 LINE CR1 620 chr19 4716898 4717591 CR1-Y2 513 + 4716898 4717591 0 2 130,225, 0,468, +,+, 203769 LINE CR1 621 chr19 4773828 4776231 CR1-Y2 341 - 4773828 4776231 0 2 21,275, 0,2128, -,-, 203811 LINE CR1 621 chr19 4774183 4775931 CR1-X1 508 + 4774183 4775931 0 3 158,749,300, 0,158,1448, +,+,+, 203812 LINE CR1 621 chr19 4781385 4783907 CR1-Y2 341 - 4781385 4783907 0 2 98,275, 0,2247, -,-, 203817 LINE CR1 621 chr19 4781858 4783607 CR1-X 361 + 4781858 4783607 0 2 158,1591, 0,158, +,+, 203818 LINE CR1 623 chr19 5039776 5042724 CR1-F2 409 + 5039776 5042724 0 2 233,67, 0,2881, +,+, 203932 LINE CR1 626 chr19 5448086 5449022 CR1-X1 283 - 5448086 5449022 0 2 153,55, 0,881, -,-, 204084 LINE CR1 626 chr19 5469701 5470165 CR1-C4 434 + 5469701 5470165 0 2 325,128, 0,336, +,+, 204097 LINE CR1 626 chr19 5493815 5493900 (C)n 813 + 5493815 5493900 0 2 25,19, 0,66, +,+, 204111 Simple_repeat Simple_repeat 628 chr19 5643989 5644150 CR1-F2 445 + 5643989 5644150 0 2 74,73, 0,88, +,+, 204186 LINE CR1 628 chr19 5672514 5675657 CR1-F2 527 - 5672514 5675657 0 3 110,198,67, 0,1826,3076, -,-,-, 204208 LINE CR1 628 chr19 5687522 5687595 CR1-H2 598 - 5687522 5687595 0 2 12,61, 0,12, -,-, 204226 LINE CR1 628 chr19 5712711 5715029 CR1-H2 534 - 5712711 5715029 0 2 65,72, 0,2246, -,-, 204246 LINE CR1 629 chr19 5822850 5823282 (CATCC)n 363 + 5822850 5823282 0 2 115,298, 0,134, +,+, 204311 Simple_repeat Simple_repeat 630 chr19 5972914 5973048 (T)n 689 + 5972914 5973048 0 2 60,31, 0,103, +,+, 204398 Simple_repeat Simple_repeat 630 chr19 5981930 5982044 (CGGCG)n 218 + 5981930 5982044 0 2 23,65, 0,49, +,+, 204405 Simple_repeat Simple_repeat 638 chr19 7011096 7012820 CR1-F2 397 + 7011096 7012820 0 2 133,99, 0,1625, +,+, 204764 LINE CR1 638 chr19 7048491 7048574 (TTTGG)n 352 + 7048491 7048574 0 2 16,47, 0,36, +,+, 204788 Simple_repeat Simple_repeat 640 chr19 7272717 7273508 Char12Mar1_GG 614 - 7272717 7273508 0 2 41,444, 0,347, -,-, 204889 DNA hAT-Charlie 644 chr19 7773720 7773966 CR1-H 328 + 7773720 7773966 0 2 155,70, 0,176, +,+, 205043 LINE CR1 645 chr19 7875393 7875747 CR1-X2 379 + 7875393 7875747 0 2 209,145, 0,209, +,+, 205068 LINE CR1 647 chr19 8138562 8139373 GGLTR12C 414 - 8138562 8139373 0 2 250,106, 0,705, -,-, 205151 LTR ERVL 651 chr19 8689502 8689568 G-rich 356 + 8689502 8689568 0 2 13,36, 0,30, +,+, 205366 Low_complexity Low_complexity 655 chr19 9177112 9177183 GGLTR3F1 960 + 9177112 9177183 0 2 28,43, 0,28, +,+, 205529 LTR ERVL 656 chr19 9423543 9423619 (GCC)n 378 + 9423543 9423619 0 2 11,26, 0,50, +,+, 205604 Simple_repeat Simple_repeat 657 chr19 9525420 9525549 G-rich 497 + 9525420 9525549 0 2 40,50, 0,79, +,+, 205643 Low_complexity Low_complexity 659 chr19 9743697 9749105 CR1-C4 590 + 9743697 9749105 0 2 512,83, 0,5325, +,+, 205734 LINE CR1 660 chr19 9842486 9843389 GGLTR6 479 - 9842486 9843389 0 2 137,227, 0,676, -,-, 205785 LTR ERVL 660 chr19 9845842 9846885 CR1-D2 680 + 9845842 9846885 0 2 778,143, 0,900, +,+, 205788 LINE CR1 660 chr19 9911344 9911981 CR1-C4 381 + 9911344 9911981 0 2 567,70, 0,567, +,+, 205817 LINE CR1 660 chr19 9947663 9948696 CR1-C4 320 + 9947663 9948696 0 2 330,648, 0,385, +,+, 205835 LINE CR1 585 chr19_NT_462717v1_random 15220 15955 GGLTR11-int 202 + 15220 15955 0 2 388,232, 0,503, +,+, 205865 LTR ERV1 585 chr19_NT_462717v1_random 16305 19466 GGLTR7-int 412 + 16305 19466 0 3 1917,949,153, 0,2012,3008, +,+,+, 205866 LTR ERV1 585 chr19_NT_462717v1_random 28658 29045 (CAAGG)n 611 + 28658 29045 0 2 179,208, 0,179, +,+, 205874 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 29190 30089 (CAAGG)n 643 + 29190 30089 0 2 404,484, 0,415, +,+, 205876 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 30072 31373 (CAAGG)n 630 + 30072 31373 0 4 149,260,280,88, 0,455,744,1213, +,+,+,+, 205878 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 31443 31867 (CAAGG)n 657 + 31443 31867 0 2 179,237, 0,187, +,+, 205884 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 32077 32744 (CAAGG)n 572 + 32077 32744 0 2 129,360, 0,307, +,+, 205886 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 32812 33181 (CAAGG)n 597 + 32812 33181 0 2 180,189, 0,180, +,+, 205889 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 33282 34083 (CAAGG)n 613 + 33282 34083 0 3 249,104,84, 0,266,717, +,+,+, 205891 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 36188 36678 (CAGGC)n 538 + 36188 36678 0 2 245,66, 0,424, +,+, 205906 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 38011 38333 (CAAGG)n 477 + 38011 38333 0 2 131,191, 0,131, +,+, 205915 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 38324 38910 (CAGGC)n 518 + 38324 38910 0 2 227,171, 0,415, +,+, 205916 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 40350 40822 (CAGGC)n 520 + 40350 40822 0 3 11,24,82, 0,196,390, +,+,+, 205930 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 41043 41278 (CAAGG)n 540 + 41043 41278 0 2 173,25, 0,210, +,+, 205935 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 41307 41726 (CAGGC)n 472 + 41307 41726 0 2 201,40, 0,379, +,+, 205937 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 41986 42790 (CAGGC)n 468 + 41986 42790 0 4 186,221,92,79, 0,186,407,725, +,+,+,+, 205943 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 42761 43326 (CAAGG)n 532 + 42761 43326 0 2 282,104, 0,461, +,+, 205945 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 43702 44555 (CAGGC)n 501 + 43702 44555 0 3 201,40,410, 0,378,443, +,+,+, 205950 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 44426 45023 (CAAGG)n 594 + 44426 45023 0 2 228,339, 0,258, +,+, 205952 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 44911 45696 (CAGGC)n 527 + 44911 45696 0 4 129,70,202,188, 0,313,395,597, +,+,+,+, 205953 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 45629 46101 (CAAGG)n 563 + 45629 46101 0 2 226,245, 0,227, +,+, 205955 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 46148 46586 (CAAGG)n 508 + 46148 46586 0 2 221,32, 0,406, +,+, 205957 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 46937 47443 (CAGGC)n 562 + 46937 47443 0 2 237,258, 0,248, +,+, 205963 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 48402 48887 (CAAGG)n 620 + 48402 48887 0 2 237,69, 0,416, +,+, 205970 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 49199 49864 (CAGGC)n 516 + 49199 49864 0 2 472,177, 0,488, +,+, 205975 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 49797 50476 (CAAGG)n 572 + 49797 50476 0 2 196,68, 0,611, +,+, 205976 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 50855 51146 (CAGGC)n 434 + 50855 51146 0 2 64,215, 0,76, +,+, 205982 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 51243 51645 (CAGGC)n 574 + 51243 51645 0 2 180,200, 0,202, +,+, 205984 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 51661 52180 (CAAGG)n 628 + 51661 52180 0 2 196,145, 0,374, +,+, 205986 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 52682 53359 (CAAGG)n 661 + 52682 53359 0 2 412,248, 0,429, +,+, 205991 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 53645 54251 (CAGGC)n 489 + 53645 54251 0 2 379,200, 0,406, +,+, 205994 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 54324 54614 (CAAGG)n 419 + 54324 54614 0 2 24,254, 0,36, +,+, 205996 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 58031 58622 (CAGGC)n 436 + 58031 58622 0 3 147,27,184, 0,324,407, +,+,+, 206017 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 58773 59126 (CAGGC)n 528 + 58773 59126 0 2 179,174, 0,179, +,+, 206021 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 59458 59573 (AGGCC)n 652 + 59458 59573 0 2 39,65, 0,50, +,+, 206023 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 61513 62040 (CAAGG)n 622 + 61513 62040 0 2 207,136, 0,391, +,+, 206037 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 62947 63612 (CAAGG)n 578 + 62947 63612 0 2 302,195, 0,470, +,+, 206044 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 64434 64986 (CAGGC)n 484 + 64434 64986 0 2 174,200, 0,352, +,+, 206052 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 79013 79440 (CCTCG)n 633 + 79013 79440 0 2 217,210, 0,217, +,+, 206067 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 79500 80601 (CCTCG)n 638 + 79500 80601 0 5 234,26,49,21,42, 0,419,624,855,1059, +,+,+,+,+, 206069 Simple_repeat Simple_repeat 585 chr19_NT_462717v1_random 81914 86723 GGXHOI 392 + 81914 86723 0 6 1183,941,977,843,527,142, 0,1203,2201,3198,4100,4667, +,+,+,+,+,+, 206078 Satellite W-chromosome 585 chr19_NT_462720v1_random 2343 2667 GGERV10_LTR 677 + 2343 2667 0 2 60,156, 0,168, +,+, 206130 LTR ERVL 585 chr19_NT_462720v1_random 17515 18608 GGLTR11-int 225 + 17515 18608 0 3 68,388,227, 0,363,866, +,+,+, 206139 LTR ERV1 585 chr19_NT_462720v1_random 18972 21925 GGLTR7-int 489 + 18972 21925 0 2 1907,951, 0,2002, +,+, 206140 LTR ERV1 585 chr19_NT_462721v1_random 17386 17712 GGERV10_LTR 663 + 17386 17712 0 2 60,157, 0,169, +,+, 206160 LTR ERVL 585 chr19_NT_462728v1_random 8787 9111 GGERV10_LTR 677 + 8787 9111 0 2 60,156, 0,168, +,+, 206263 LTR ERVL 585 chr19_NT_462750v1_random 5852 6898 CR1-D2 681 - 5852 6898 0 2 143,778, 0,268, -,-, 206416 LINE CR1 585 chr19_NT_462762v1_random 1288 2420 CR1-C3 490 - 1288 2420 0 2 161,265, 0,867, -,-, 206446 LINE CR1 585 chr19_NT_462779v1_random 480 824 (TCCG)n 483 + 480 824 0 2 272,27, 0,317, +,+, 206475 Simple_repeat Simple_repeat 585 chr1_NT_456094v1_random 4454 4790 GGERV10_LTR 545 - 4454 4790 0 2 159,85, 0,251, -,-, 206517 LTR ERVL 585 chr1_NT_456094v1_random 4872 6976 CR1-D 606 + 4872 6976 0 2 840,987, 0,1117, +,+, 206519 LINE CR1 585 chr1_NT_456094v1_random 15113 15429 GGERV10_LTR 578 - 15113 15429 0 2 159,66, 0,250, -,-, 206525 LTR ERVL 585 chr1_NT_456094v1_random 16394 17318 TguLTR5e 343 + 16394 17318 0 2 98,166, 0,758, +,+, 206527 LTR ERVL 585 chr1_NT_456094v1_random 17332 19701 CR1-D 560 + 17332 19701 0 2 1122,970, 0,1399, +,+, 206529 LINE CR1 585 chr1_NT_456094v1_random 35936 36852 TguLTR5e 323 + 35936 36852 0 2 99,161, 0,755, +,+, 206534 LTR ERVL 585 chr1_NT_456094v1_random 36866 39236 CR1-D 547 + 36866 39236 0 2 1117,976, 0,1394, +,+, 206536 LINE CR1 585 chr1_NT_456094v1_random 49484 50329 GGLTR7-int 785 - 49484 50329 0 3 350,260,213, 0,350,632, -,-,-, 206543 LTR ERV1 585 chr1_NT_456094v1_random 50676 54684 GGERV28_I-int 209 - 50676 54684 0 3 1815,1442,64, 0,2131,3944, -,-,-, 206544 LTR ERVK 585 chr1_NT_456094v1_random 61301 61628 GGERV10_LTR 606 - 61301 61628 0 2 159,76, 0,251, -,-, 206547 LTR ERVL 585 chr1_NT_456094v1_random 61719 63807 CR1-D 592 + 61719 63807 0 2 836,984, 0,1104, +,+, 206549 LINE CR1 585 chr1_NT_456095v1_random 1488 3660 GGERVL-B-int 799 + 1488 3660 0 5 89,277,448,630,192, 0,624,901,1350,1980, +,+,+,+,+, 206554 LTR ERVL 585 chr1_NT_456095v1_random 3715 7368 CR1-F2 718 + 3715 7368 0 4 1384,168,941,804, 0,1386,1908,2849, +,+,+,+, 206557 LINE CR1 585 chr1_NT_456095v1_random 23907 25378 GGLTR3B1 722 - 23907 25378 0 2 981,490, 0,981, -,-, 206577 LTR ERVL 585 chr1_NT_456095v1_random 34890 36554 CR1-C4 127 - 34890 36554 0 2 441,186, 0,1478, -,-, 206585 LINE CR1 585 chr1_NT_456095v1_random 39664 41974 CR1-H 854 + 39664 41974 0 2 605,1705, 0,605, +,+, 206591 LINE CR1 585 chr1_NT_456095v1_random 41975 43309 CR1-F 453 + 41975 43309 0 2 1070,264, 0,1070, +,+, 206592 LINE CR1 585 chr1_NT_456095v1_random 43359 43838 CR1-F2 618 + 43359 43838 0 2 95,136, 0,343, +,+, 206594 LINE CR1 585 chr1_NT_456096v1_random 4837 12556 GGERVL18-int 776 + 4837 12556 0 3 677,694,292, 0,6733,7427, +,+,+, 206604 LTR ERVL 585 chr1_NT_456096v1_random 5514 11570 GGLTR7A 869 + 5514 11570 0 4 608,1607,3225,609, 0,608,2222,5447, +,+,+,+, 206605 LTR ERV1 585 chr1_NT_456096v1_random 15666 21927 CR1-Y3 788 + 15666 21927 0 2 176,421, 0,5840, +,+, 206607 LINE CR1 585 chr1_NT_456096v1_random 16292 21512 CR1-E 808 + 16292 21512 0 2 304,417, 0,4803, +,+, 206609 LINE CR1 585 chr1_NT_456096v1_random 16597 21096 GGLTR3B1 681 + 16597 21096 0 2 501,3998, 0,501, +,+, 206610 LTR ERVL 585 chr1_NT_456096v1_random 29918 32578 GGERVL-B-int 651 - 29918 32578 0 4 304,243,376,422, 0,639,882,2238, -,-,-,-, 206616 LTR ERVL 585 chr1_NT_456096v1_random 34832 35627 GGERVL-C-int 709 - 34832 35627 0 2 109,681, 0,114, -,-, 206623 LTR ERVL 585 chr1_NT_456096v1_random 35737 38866 GGERVL-A-int 411 - 35737 38866 0 4 1292,468,349,94, 0,1879,2686,3035, -,-,-,-, 206624 LTR ERVL 585 chr1_NT_456096v1_random 38858 40182 CR1-C 698 + 38858 40182 0 2 386,351, 0,973, +,+, 206627 LINE CR1 585 chr1_NT_456096v1_random 41724 55050 CR1-C2 857 + 41724 55050 0 3 1353,222,1911, 0,1353,11415, +,+,+, 206631 LINE CR1 585 chr1_NT_456096v1_random 43295 43533 GGERV10_LTR 786 + 43295 43533 0 2 62,59, 0,179, +,+, 206632 LTR ERVL 585 chr1_NT_456096v1_random 47204 53138 GGERV10_LTR 862 + 47204 53138 0 4 224,5382,62,158, 0,225,5607,5776, +,+,+,+, 206636 LTR ERVL 585 chr1_NT_456098v1_random 5478 7750 ENS3-int 790 + 5478 7750 0 2 929,1339, 0,933, +,+, 206671 LTR ERVL 585 chr1_NT_456098v1_random 9276 13000 GGERV28_I-int 103 + 9276 13000 0 3 1443,795,954, 0,1758,2770, +,+,+, 206673 LTR ERVK 585 chr1_NT_456098v1_random 13238 14087 GGLTR7-int 783 + 13238 14087 0 3 213,264,350, 0,235,499, +,+,+, 206674 LTR ERV1 585 chr1_NT_456098v1_random 16602 18654 GGERV28_I-int 331 + 16602 18654 0 3 128,58,162, 0,1310,1890, +,+,+, 206675 LTR ERVK 585 chr1_NT_456098v1_random 21566 23808 GGERVL18-int 464 - 21566 23808 0 2 1895,339, 0,1903, -,-, 206680 LTR ERVL 585 chr1_NT_456098v1_random 25423 28409 GGERVL18-int 597 + 25423 28409 0 4 138,561,511,1139, 0,142,859,1847, +,+,+,+, 206683 LTR ERVL 585 chr1_NT_456098v1_random 33062 34170 GGERVL18-LTR 625 - 33062 34170 0 2 867,241, 0,867, -,-, 206690 LTR ERVL 585 chr1_NT_456098v1_random 36737 37068 GGERV10_LTR 709 + 36737 37068 0 2 65,160, 0,171, +,+, 206692 LTR ERVL 585 chr1_NT_456099v1_random 2517 3892 CR1-B2 620 - 2517 3892 0 2 316,1058, 0,317, -,-, 206703 LINE CR1 585 chr1_NT_456099v1_random 8754 9267 CR1-D2 600 - 8754 9267 0 2 72,307, 0,206, -,-, 206709 LINE CR1 585 chr1_NT_456099v1_random 19658 21033 CR1-B2 658 - 19658 21033 0 2 315,1059, 0,316, -,-, 206726 LINE CR1 585 chr1_NT_456099v1_random 25871 26384 CR1-B 620 - 25871 26384 0 2 72,263, 0,250, -,-, 206734 LINE CR1 585 chr1_NT_456099v1_random 37040 38416 CR1-B2 655 - 37040 38416 0 2 315,1060, 0,316, -,-, 206748 LINE CR1 585 chr1_NT_456101v1_random 10858 11733 CR1-F2 580 + 10858 11733 0 2 195,680, 0,195, +,+, 206801 LINE CR1 585 chr1_NT_456101v1_random 17720 18288 GGERVL-C-int 259 - 17720 18288 0 2 423,145, 0,423, -,-, 206806 LTR ERVL 585 chr1_NT_456102v1_random 3886 4401 GGLTR3G2 331 - 3886 4401 0 2 160,355, 0,160, -,-, 206820 LTR ERVL 585 chr1_NT_456102v1_random 27816 28332 GGLTR3G2 332 + 27816 28332 0 2 356,160, 0,356, +,+, 206836 LTR ERVL 585 chr1_NT_456102v1_random 34937 38168 GGLTR3F1 924 - 34937 38168 0 2 496,2735, 0,496, -,-, 206844 LTR ERVL 585 chr1_NT_456103v1_random 3375 4481 CR1-G 353 + 3375 4481 0 2 182,186, 0,920, +,+, 206851 LINE CR1 585 chr1_NT_456103v1_random 8738 9051 GGERV10_LTR 635 + 8738 9051 0 2 62,163, 0,150, +,+, 206856 LTR ERVL 585 chr1_NT_456103v1_random 9183 19396 GGLTR7-int 678 - 9183 19396 0 5 175,2596,1792,169,409, 0,480,7792,9585,9804, -,-,-,-,-, 206857 LTR ERV1 585 chr1_NT_456103v1_random 12259 16975 ENS1-LTR 877 - 12259 16975 0 3 947,2821,947, 0,947,3769, -,-,-, 206858 LTR ERVL 585 chr1_NT_456103v1_random 19758 20305 GGERV28_LTR 556 + 19758 20305 0 2 271,214, 0,333, +,+, 206861 LTR ERVK 585 chr1_NT_456103v1_random 26312 26726 ENS1B-LTR 218 + 26312 26726 0 2 176,69, 0,345, +,+, 206868 LTR ERVL 585 chr1_NT_456103v1_random 29914 35210 GGERV10_LTR 741 + 29914 35210 0 2 211,5084, 0,212, +,+, 206875 LTR ERVL 585 chr1_NT_456103v1_random 35429 36209 ENS1B-LTR 667 - 35429 36209 0 2 56,724, 0,56, -,-, 206877 LTR ERVL 585 chr1_NT_456105v1_random 15378 17949 CR1-C 825 - 15378 17949 0 3 1168,449,953, 0,1168,1618, -,-,-, 206904 LINE CR1 585 chr1_NT_456106v1_random 9095 9861 CR1-C 523 + 9095 9861 0 2 198,209, 0,557, +,+, 206934 LINE CR1 585 chr1_NT_456106v1_random 14624 15390 CR1-C 511 + 14624 15390 0 2 196,209, 0,557, +,+, 206941 LINE CR1 585 chr1_NT_456106v1_random 20087 20855 CR1-C 500 + 20087 20855 0 2 196,209, 0,559, +,+, 206948 LINE CR1 585 chr1_NT_456106v1_random 25499 26265 CR1-C 510 + 25499 26265 0 2 196,209, 0,557, +,+, 206955 LINE CR1 585 chr1_NT_456108v1_random 5824 6474 CR1-C 498 - 5824 6474 0 2 431,193, 0,457, -,-, 206981 LINE CR1 585 chr1_NT_456108v1_random 9197 9847 CR1-C 498 - 9197 9847 0 2 431,193, 0,457, -,-, 206985 LINE CR1 585 chr1_NT_456108v1_random 12570 13220 CR1-C 498 - 12570 13220 0 2 431,193, 0,457, -,-, 206989 LINE CR1 585 chr1_NT_456108v1_random 15942 16593 CR1-C 494 - 15942 16593 0 2 432,193, 0,458, -,-, 206993 LINE CR1 585 chr1_NT_456108v1_random 19316 19968 CR1-C 492 - 19316 19968 0 2 433,193, 0,459, -,-, 206997 LINE CR1 585 chr1_NT_456108v1_random 22693 23342 CR1-C 502 - 22693 23342 0 2 430,193, 0,456, -,-, 207001 LINE CR1 585 chr1_NT_456108v1_random 29113 30051 CR1-C 560 + 29113 30051 0 2 34,838, 0,100, +,+, 207009 LINE CR1 585 chr1_NT_456109v1_random 1002 1423 CR1-D 436 + 1002 1423 0 2 164,133, 0,288, +,+, 207013 LINE CR1 585 chr1_NT_456109v1_random 25014 25133 G-rich 372 + 25014 25133 0 2 22,68, 0,51, +,+, 207037 Low_complexity Low_complexity 585 chr1_NT_456109v1_random 30341 31713 CR1-B2 611 + 30341 31713 0 2 1059,312, 0,1060, +,+, 207047 LINE CR1 585 chr1_NT_456110v1_random 1157 5257 LSU-rRNA_Hsa 583 - 1157 5257 0 4 496,88,494,2632, 0,720,844,1468, -,-,-,-, 207057 rRNA rRNA 585 chr1_NT_456110v1_random 30733 32345 LSU-rRNA_Hsa 723 - 30733 32345 0 3 618,70,700, 0,776,912, -,-,-, 207091 rRNA rRNA 585 chr1_NT_456111v1_random 3555 6331 LSU-rRNA_Hsa 641 + 3555 6331 0 2 884,1570, 0,1206, +,+, 207099 rRNA rRNA 585 chr1_NT_456111v1_random 22172 26608 LSU-rRNA_Hsa 673 + 22172 26608 0 3 2745,108,1485, 0,2745,2951, +,+,+, 207132 rRNA rRNA 585 chr1_NT_456112v1_random 774 5164 LSU-rRNA_Hsa 637 - 774 5164 0 3 1524,109,2689, 0,1574,1701, -,-,-, 207159 rRNA rRNA 585 chr1_NT_456112v1_random 14432 16436 CR1-H 800 - 14432 16436 0 2 208,1796, 0,208, -,-, 207176 LINE CR1 585 chr1_NT_456112v1_random 20611 21408 CR1-X 389 + 20611 21408 0 2 451,346, 0,451, +,+, 207179 LINE CR1 585 chr1_NT_456113v1_random 17732 19877 GGERV20_I-int 787 - 17732 19877 0 3 850,510,566, 0,1069,1579, -,-,-, 207201 LTR ERVL 585 chr1_NT_456113v1_random 19877 25315 GGLTR7A 857 + 19877 25315 0 2 4850,588, 0,4850, +,+, 207203 LTR ERV1 585 chr1_NT_456113v1_random 25337 27941 ENS1-int 581 - 25337 27941 0 3 302,365,1044, 0,1195,1560, -,-,-, 207204 LTR ERVL 585 chr1_NT_456113v1_random 28183 31764 CR1-F2 851 + 28183 31764 0 2 2729,852, 0,2729, +,+, 207207 LINE CR1 585 chr1_NT_456114v1_random 18387 21557 GGLTR3F1 946 - 18387 21557 0 2 494,2676, 0,494, -,-, 207220 LTR ERVL 585 chr1_NT_456114v1_random 21553 23810 GGLTR3F1 816 - 21553 23810 0 2 1763,493, 0,1764, -,-, 207221 LTR ERVL 585 chr1_NT_456115v1_random 14132 18360 LSU-rRNA_Hsa 551 + 14132 18360 0 3 2545,106,1502, 0,2567,2726, +,+,+, 207232 rRNA rRNA 585 chr1_NT_456117v1_random 4844 6840 CR1-D 552 - 4844 6840 0 2 1521,475, 0,1521, -,-, 207290 LINE CR1 585 chr1_NT_456117v1_random 13840 14398 GGERVL-B-int 846 - 13840 14398 0 2 432,126, 0,432, -,-, 207295 LTR ERVL 585 chr1_NT_456117v1_random 14718 16214 GGLTR3B1 825 + 14718 16214 0 2 390,77, 0,1419, +,+, 207297 LTR ERVL 585 chr1_NT_456121v1_random 23295 23954 CR1-C 470 - 23295 23954 0 2 440,193, 0,466, -,-, 207392 LINE CR1 585 chr1_NT_456121v1_random 26644 27178 CR1-C 456 - 26644 27178 0 2 313,195, 0,339, -,-, 207396 LINE CR1 585 chr1_NT_456122v1_random 2921 3429 GGLTR3D 299 - 2921 3429 0 2 159,349, 0,159, -,-, 207400 LTR ERVL 585 chr1_NT_456122v1_random 9561 10077 GGLTR3G2 326 - 9561 10077 0 2 160,356, 0,160, -,-, 207404 LTR ERVL 585 chr1_NT_456122v1_random 18332 18848 GGLTR3G2 319 - 18332 18848 0 2 161,355, 0,161, -,-, 207412 LTR ERVL 585 chr1_NT_456122v1_random 27062 27563 GGLTR3G2 327 - 27062 27563 0 2 155,346, 0,155, -,-, 207419 LTR ERVL 585 chr1_NT_456123v1_random 23692 27923 LSU-rRNA_Hsa 623 - 23692 27923 0 3 1434,1426,674, 0,1642,3557, -,-,-, 207458 rRNA rRNA 585 chr1_NT_456124v1_random 10844 14391 GGLTR7-int 416 + 10844 14391 0 4 103,1612,948,278, 0,569,2276,3269, +,+,+,+, 207468 LTR ERV1 585 chr1_NT_456124v1_random 21929 22022 CR1-E 653 - 21929 22022 0 2 49,44, 0,49, -,-, 207475 LINE CR1 585 chr1_NT_456124v1_random 23845 27387 GGLTR7-int 423 + 23845 27387 0 4 101,1611,948,277, 0,564,2270,3265, +,+,+,+, 207478 LTR ERV1 585 chr1_NT_456125v1_random 21920 22009 (CGCG)n 314 + 21920 22009 0 2 27,11, 0,78, +,+, 207490 Simple_repeat Simple_repeat 585 chr1_NT_456127v1_random 2589 3106 GGLTR3G2 321 - 2589 3106 0 2 160,357, 0,160, -,-, 207518 LTR ERVL 585 chr1_NT_456127v1_random 11356 11872 GGLTR3G2 326 - 11356 11872 0 2 160,356, 0,160, -,-, 207526 LTR ERVL 585 chr1_NT_456127v1_random 20123 20633 GGLTR3G2 302 - 20123 20633 0 2 160,350, 0,160, -,-, 207534 LTR ERVL 585 chr1_NT_456129v1_random 499 4605 LSU-rRNA_Hsa 559 + 499 4605 0 3 2442,106,1508, 0,2444,2598, +,+,+, 207565 rRNA rRNA 585 chr1_NT_456130v1_random 5108 5651 CR1-H2 212 + 5108 5651 0 2 341,180, 0,363, +,+, 207589 LINE CR1 585 chr1_NT_456130v1_random 15891 17099 CR1-D2 534 + 15891 17099 0 2 179,1029, 0,179, +,+, 207600 LINE CR1 585 chr1_NT_456131v1_random 1952 3215 GGERV20_I-int 670 + 1952 3215 0 3 528,185,59, 0,1017,1204, +,+,+, 207609 LTR ERVL 585 chr1_NT_456131v1_random 7696 8723 CR1-G 353 - 7696 8723 0 2 186,182, 0,845, -,-, 207617 LINE CR1 585 chr1_NT_456131v1_random 19204 24642 GGERV10_LTR 885 + 19204 24642 0 2 219,5218, 0,220, +,+, 207630 LTR ERVL 585 chr1_NT_456132v1_random 3357 6096 CR1-Y 470 + 3357 6096 0 2 177,2070, 0,669, +,+, 207637 LINE CR1 585 chr1_NT_456132v1_random 8260 8534 CR1-Y4 671 - 8260 8534 0 2 108,165, 0,109, -,-, 207642 LINE CR1 585 chr1_NT_456132v1_random 10203 10626 (TCTCC)n 949 + 10203 10626 0 2 181,181, 0,242, +,+, 207647 Simple_repeat Simple_repeat 585 chr1_NT_456132v1_random 11770 12106 GGCAN 843 + 11770 12106 0 2 213,83, 0,253, +,+, 207652 Unknown Unknown 585 chr1_NT_456132v1_random 22093 24832 CR1-Y 470 + 22093 24832 0 2 177,2070, 0,669, +,+, 207658 LINE CR1 585 chr1_NT_456134v1_random 13642 14211 GGERVL-C-int 264 + 13642 14211 0 2 166,403, 0,166, +,+, 207681 LTR ERVL 585 chr1_NT_456134v1_random 19153 20091 CR1-C 570 - 19153 20091 0 2 838,34, 0,904, -,-, 207683 LINE CR1 585 chr1_NT_456135v1_random 7595 10215 CR1-Y 707 - 7595 10215 0 2 1028,95, 0,2525, -,-, 207698 LINE CR1 585 chr1_NT_456135v1_random 14835 15026 CR1-Y1_Aves 436 - 14835 15026 0 2 106,85, 0,106, -,-, 207702 LINE CR1 585 chr1_NT_456136v1_random 5158 5674 GGLTR3G2 327 + 5158 5674 0 2 356,160, 0,356, +,+, 207717 LTR ERVL 585 chr1_NT_456136v1_random 12453 13066 CR1-Y2_Aves 176 + 12453 13066 0 2 168,226, 0,387, +,+, 207723 LINE CR1 585 chr1_NT_456137v1_random 1334 1844 CR1-D2 595 - 1334 1844 0 2 72,306, 0,204, -,-, 207734 LINE CR1 585 chr1_NT_456137v1_random 12914 14635 CR1-B2 650 - 12914 14635 0 2 316,1404, 0,317, -,-, 207752 LINE CR1 585 chr1_NT_456137v1_random 20672 21185 CR1-D2 595 - 20672 21185 0 2 72,307, 0,206, -,-, 207760 LINE CR1 585 chr1_NT_456138v1_random 10542 12263 CR1-B2 654 + 10542 12263 0 2 1405,315, 0,1406, +,+, 207787 LINE CR1 585 chr1_NT_456138v1_random 23090 23605 CR1-B2 726 + 23090 23605 0 2 263,238, 0,277, +,+, 207803 LINE CR1 585 chr1_NT_456140v1_random 1700 3013 GGLTR7-int 303 + 1700 3013 0 3 100,237,281, 0,129,1032, +,+,+, 207833 LTR ERV1 585 chr1_NT_456140v1_random 12323 13453 CR1-F2 877 - 12323 13453 0 2 475,655, 0,475, -,-, 207843 LINE CR1 585 chr1_NT_456140v1_random 14288 14625 (CAAGG)n 590 + 14288 14625 0 2 95,64, 0,273, +,+, 207846 Simple_repeat Simple_repeat 585 chr1_NT_456140v1_random 15250 15645 (CAAGG)n 536 + 15250 15645 0 2 178,205, 0,190, +,+, 207850 Simple_repeat Simple_repeat 585 chr1_NT_456140v1_random 15871 16798 (CAAGG)n 635 + 15871 16798 0 3 178,200,157, 0,211,770, +,+,+, 207853 Simple_repeat Simple_repeat 585 chr1_NT_456142v1_random 5862 6378 GGLTR3G2 330 - 5862 6378 0 2 160,356, 0,160, -,-, 207876 LTR ERVL 585 chr1_NT_456142v1_random 12506 13022 GGLTR3G2 330 - 12506 13022 0 2 160,356, 0,160, -,-, 207879 LTR ERVL 585 chr1_NT_456142v1_random 19154 19666 GGLTR3G2 324 - 19154 19666 0 2 158,354, 0,158, -,-, 207883 LTR ERVL 585 chr1_NT_456144v1_random 13984 19810 GGERV10_LTR 974 - 13984 19810 0 3 220,5385,220, 0,220,5606, -,-,-, 207900 LTR ERVL 585 chr1_NT_456145v1_random 4856 9285 LSU-rRNA_Hsa 695 + 4856 9285 0 4 2722,107,90,1447, 0,2747,2858,2982, +,+,+,+, 207913 rRNA rRNA 585 chr1_NT_456146v1_random 16505 17011 CR1-B2 727 + 16505 17011 0 2 265,228, 0,278, +,+, 207962 LINE CR1 585 chr1_NT_456147v1_random 13914 18031 CR1-F2 595 + 13914 18031 0 4 1052,231,38,723, 0,1052,3290,3394, +,+,+,+, 207988 LINE CR1 585 chr1_NT_456148v1_random 14764 19188 LSU-rRNA_Hsa 663 + 14764 19188 0 3 2715,106,1531, 0,2738,2893, +,+,+, 208021 rRNA rRNA 585 chr1_NT_456149v1_random 4080 8521 LSU-rRNA_Hsa 627 - 4080 8521 0 3 1535,108,2748, 0,1585,1693, -,-,-, 208057 rRNA rRNA 585 chr1_NT_456151v1_random 1821 2335 CR1-D2 571 - 1821 2335 0 2 72,307, 0,207, -,-, 208092 LINE CR1 585 chr1_NT_456151v1_random 11826 13471 CR1-B2 589 - 11826 13471 0 2 314,1330, 0,315, -,-, 208108 LINE CR1 585 chr1_NT_456152v1_random 5496 5909 CR1-D2 610 - 5496 5909 0 2 199,194, 0,219, -,-, 208131 LINE CR1 585 chr1_NT_456153v1_random 536 1319 LSU-rRNA_Hsa 557 - 536 1319 0 2 81,688, 0,95, -,-, 208138 rRNA rRNA 585 chr1_NT_456154v1_random 6370 6886 GGLTR3G2 326 - 6370 6886 0 2 160,356, 0,160, -,-, 208165 LTR ERVL 585 chr1_NT_456154v1_random 15150 15666 GGLTR3G2 330 - 15150 15666 0 2 160,356, 0,160, -,-, 208173 LTR ERVL 585 chr1_NT_456155v1_random 2663 3330 GGLTR7-int 773 - 2663 3330 0 3 160,257,213, 0,175,454, -,-,-, 208180 LTR ERV1 585 chr1_NT_456155v1_random 3566 7730 GGERV28_I-int 207 - 3566 7730 0 3 1972,1441,64, 0,2288,4100, -,-,-, 208181 LTR ERVK 585 chr1_NT_456155v1_random 14345 14681 GGERV10_LTR 594 - 14345 14681 0 2 159,85, 0,251, -,-, 208184 LTR ERVL 585 chr1_NT_456155v1_random 14763 16869 CR1-D 620 + 14763 16869 0 2 841,988, 0,1118, +,+, 208186 LINE CR1 585 chr1_NT_456156v1_random 7740 11492 GGERV10_LTR 558 + 7740 11492 0 4 832,2591,16,148, 0,832,3468,3604, +,+,+,+, 208192 LTR ERVL 585 chr1_NT_456156v1_random 11493 15067 GGERVL18-int 544 + 11493 15067 0 5 1053,1968,143,182,155, 0,1058,3026,3170,3419, +,+,+,+,+, 208194 LTR ERVL 585 chr1_NT_456156v1_random 16468 22596 GGLTR7A 837 + 16468 22596 0 2 599,5529, 0,599, +,+, 208200 LTR ERV1 585 chr1_NT_456157v1_random 15907 20272 LSU-rRNA_Hsa 630 + 15907 20272 0 3 2699,108,1526, 0,2720,2839, +,+,+, 208232 rRNA rRNA 585 chr1_NT_456158v1_random 1096 1455 GGCAN 894 + 1096 1455 0 2 212,81, 0,278, +,+, 208250 Unknown Unknown 585 chr1_NT_456158v1_random 21560 22212 GGLTR8A 285 + 21560 22212 0 2 421,231, 0,421, +,+, 208261 LTR ERVL 585 chr1_NT_456159v1_random 11031 11712 CR1-Y2_Aves 417 + 11031 11712 0 2 311,323, 0,358, +,+, 208269 LINE CR1 585 chr1_NT_456160v1_random 9377 9899 CR1-Y2_Aves 440 + 9377 9899 0 2 266,248, 0,274, +,+, 208289 LINE CR1 585 chr1_NT_456162v1_random 5818 6512 Charlie12_GG 581 - 5818 6512 0 2 493,189, 0,505, -,-, 208317 DNA hAT-Charlie 585 chr1_NT_456162v1_random 6513 6787 CR1-Y4 527 + 6513 6787 0 2 185,89, 0,185, +,+, 208318 LINE CR1 585 chr1_NT_456162v1_random 7370 11336 CR1-Y3 593 - 7370 11336 0 3 307,682,1508, 0,683,2458, -,-,-, 208319 LINE CR1 585 chr1_NT_456164v1_random 4650 6251 CR1-C2 663 + 4650 6251 0 3 409,773,419, 0,409,1182, +,+,+, 208355 LINE CR1 585 chr1_NT_456164v1_random 11665 13267 CR1-C2 663 + 11665 13267 0 3 409,774,419, 0,409,1183, +,+,+, 208361 LINE CR1 585 chr1_NT_456164v1_random 18680 20198 CR1-C2 563 + 18680 20198 0 3 409,717,391, 0,409,1127, +,+,+, 208367 LINE CR1 585 chr1_NT_456165v1_random 15683 20135 ENS1-LTR 959 + 15683 20135 0 3 913,2626,913, 0,913,3539, +,+,+, 208389 LTR ERVL 585 chr1_NT_456166v1_random 2140 7961 GGERV10_LTR 912 + 2140 7961 0 3 219,5382,219, 0,220,5602, +,+,+, 208395 LTR ERVL 585 chr1_NT_456166v1_random 16667 21628 GGERV10_LTR 856 + 16667 21628 0 2 217,4743, 0,218, +,+, 208413 LTR ERVL 585 chr1_NT_456168v1_random 13659 18085 LSU-rRNA_Hsa 661 + 13659 18085 0 3 2742,107,1528, 0,2742,2898, +,+,+, 208442 rRNA rRNA 585 chr1_NT_456170v1_random 10685 15045 LSU-rRNA_Hsa 658 + 10685 15045 0 3 2654,104,1531, 0,2676,2829, +,+,+, 208491 rRNA rRNA 585 chr1_NT_456173v1_random 3524 3974 CR1-D2 567 + 3524 3974 0 3 167,125,38, 0,287,412, +,+,+, 208547 LINE CR1 585 chr1_NT_456173v1_random 15290 16482 CR1-B2 651 + 15290 16482 0 2 949,243, 0,949, +,+, 208560 LINE CR1 585 chr1_NT_456175v1_random 12791 13151 CR1-D2 546 + 12791 13151 0 2 27,270, 0,90, +,+, 208603 LINE CR1 585 chr1_NT_456177v1_random 2899 3431 GGLTR8A 488 + 2899 3431 0 2 292,240, 0,292, +,+, 208630 LTR ERVL 585 chr1_NT_456177v1_random 4727 6734 CR1-Y 496 - 4727 6734 0 2 971,505, 0,1502, -,-, 208633 LINE CR1 585 chr1_NT_456177v1_random 5718 6226 GGLTR12C 729 - 5718 6226 0 2 125,383, 0,125, -,-, 208634 LTR ERVL 585 chr1_NT_456177v1_random 16584 17074 REP131 294 - 16584 17074 0 2 243,247, 0,243, -,-, 208647 DNA? DNA? 585 chr1_NT_456178v1_random 3493 4439 CR1-C 558 + 3493 4439 0 2 35,840, 0,106, +,+, 208655 LINE CR1 585 chr1_NT_456178v1_random 9289 9859 GGERVL-C-int 272 - 9289 9859 0 2 424,146, 0,424, -,-, 208658 LTR ERVL 585 chr1_NT_456179v1_random 9168 9934 CR1-C 510 + 9168 9934 0 2 196,209, 0,557, +,+, 208675 LINE CR1 585 chr1_NT_456181v1_random 3893 4409 GGLTR3G2 323 - 3893 4409 0 2 160,356, 0,160, -,-, 208703 LTR ERVL 585 chr1_NT_456181v1_random 5112 10112 CR1-C4 566 - 5112 10112 0 2 915,579, 0,4421, -,-, 208704 LINE CR1 585 chr1_NT_456182v1_random 5731 6260 GGLTR3F1 932 - 5731 6260 0 2 493,36, 0,493, -,-, 208717 LTR ERVL 585 chr1_NT_456183v1_random 8884 9537 CR1-E 441 - 8884 9537 0 2 312,341, 0,312, -,-, 208737 LINE CR1 585 chr1_NT_456185v1_random 17552 17839 CR1-8_Crp 476 - 17552 17839 0 2 46,149, 0,138, -,-, 208775 LINE CR1 585 chr1_NT_456185v1_random 18119 18493 CR1-C3 448 - 18119 18493 0 2 96,264, 0,110, -,-, 208776 LINE CR1 585 chr1_NT_456186v1_random 14674 19002 LSU-rRNA_Hsa 743 - 14674 19002 0 3 1537,1524,554, 0,1676,3774, -,-,-, 208792 rRNA rRNA 585 chr1_NT_456187v1_random 12960 17395 LSU-rRNA_Hsa 665 + 12960 17395 0 3 2746,107,1533, 0,2746,2902, +,+,+, 208815 rRNA rRNA 585 chr1_NT_456191v1_random 11227 11777 CR1-C4 576 + 11227 11777 0 2 348,201, 0,349, +,+, 208877 LINE CR1 585 chr1_NT_456192v1_random 3208 3812 (GAGTG)n 370 + 3208 3812 0 2 411,179, 0,425, +,+, 208892 Simple_repeat Simple_repeat 585 chr1_NT_456192v1_random 4476 9749 GGLTR3A 872 - 4476 9749 0 2 528,4745, 0,528, -,-, 208896 LTR ERVL 585 chr1_NT_456192v1_random 12925 14893 ENS1-int 543 + 12925 14893 0 3 392,362,321, 0,392,1647, +,+,+, 208901 LTR ERVL 585 chr1_NT_456192v1_random 15917 16529 (GAGTG)n 407 + 15917 16529 0 3 172,218,222, 0,172,390, +,+,+, 208905 Simple_repeat Simple_repeat 585 chr1_NT_456193v1_random 13004 13470 GGLTR6 468 + 13004 13470 0 2 314,152, 0,314, +,+, 208930 LTR ERVL 585 chr1_NT_456194v1_random 6442 7172 CR1-X2 580 + 6442 7172 0 2 240,81, 0,649, +,+, 208949 LINE CR1 585 chr1_NT_456194v1_random 17473 17891 CR1-C4 572 + 17473 17891 0 2 174,244, 0,174, +,+, 208968 LINE CR1 585 chr1_NT_456195v1_random 11930 13181 LSU-rRNA_Hsa 711 + 11930 13181 0 2 500,152, 0,1099, +,+, 208984 rRNA rRNA 585 chr1_NT_456195v1_random 13394 15910 LSU-rRNA_Hsa 618 + 13394 15910 0 2 877,1418, 0,1098, +,+, 208987 rRNA rRNA 585 chr1_NT_456196v1_random 16883 18643 CR1-Y4 488 + 16883 18643 0 2 133,156, 0,1604, +,+, 209028 LINE CR1 585 chr1_NT_456198v1_random 1405 5838 LSU-rRNA_Hsa 663 + 1405 5838 0 3 2742,108,1533, 0,2742,2900, +,+,+, 209056 rRNA rRNA 585 chr1_NT_456199v1_random 1423 1759 GGCAN 843 + 1423 1759 0 2 213,83, 0,253, +,+, 209084 Unknown Unknown 585 chr1_NT_456199v1_random 11736 13390 CR1-H2 533 + 11736 13390 0 2 177,985, 0,669, +,+, 209090 LINE CR1 585 chr1_NT_456199v1_random 15892 16164 CR1-Y4 669 - 15892 16164 0 2 108,163, 0,109, -,-, 209096 LINE CR1 585 chr1_NT_456202v1_random 10337 14778 LSU-rRNA_Hsa 643 + 10337 14778 0 3 2748,108,1535, 0,2748,2906, +,+,+, 209155 rRNA rRNA 585 chr1_NT_456203v1_random 2446 6887 LSU-rRNA_Hsa 643 + 2446 6887 0 3 2748,108,1535, 0,2748,2906, +,+,+, 209184 rRNA rRNA 585 chr1_NT_456204v1_random 3518 13536 CR1-H2 746 + 3518 13536 0 4 244,2333,411,1031, 0,5929,8262,8987, +,+,+,+, 209209 LINE CR1 585 chr1_NT_456204v1_random 8571 9364 GGLTR7A 930 - 8571 9364 0 3 40,239,514, 0,40,279, -,-,-, 209213 LTR ERV1 585 chr1_NT_456204v1_random 14018 16192 GGERV10_LTR 560 + 14018 16192 0 4 70,50,419,925, 0,588,648,1249, +,+,+,+, 209217 LTR ERVL 585 chr1_NT_456206v1_random 2285 3570 CR1-C2 575 + 2285 3570 0 3 332,731,209, 0,345,1076, +,+,+, 209232 LINE CR1 585 chr1_NT_456206v1_random 4051 11035 GGERVL-C-int 233 + 4051 11035 0 2 132,134, 0,6850, +,+, 209234 LTR ERVL 585 chr1_NT_456206v1_random 8948 10520 CR1-C2 564 + 8948 10520 0 3 387,768,417, 0,387,1155, +,+,+, 209238 LINE CR1 585 chr1_NT_456206v1_random 15543 17131 CR1-C2 651 + 15543 17131 0 3 408,769,411, 0,408,1177, +,+,+, 209243 LINE CR1 585 chr1_NT_456208v1_random 15479 17403 CR1-F2 521 - 15479 17403 0 3 140,722,375, 0,208,1549, -,-,-, 209265 LINE CR1 585 chr1_NT_456211v1_random 10374 12072 CR1-B2 621 - 10374 12072 0 2 308,1389, 0,309, -,-, 209305 LINE CR1 585 chr1_NT_456212v1_random 8359 8709 GGERV10_LTR 456 - 8359 8709 0 2 169,87, 0,263, -,-, 209317 LTR ERVL 585 chr1_NT_456212v1_random 8796 10907 CR1-D 544 + 8796 10907 0 2 830,996, 0,1115, +,+, 209319 LINE CR1 585 chr1_NT_456213v1_random 7066 7784 GGLTR8A 626 - 7066 7784 0 2 353,344, 0,374, -,-, 209327 LTR ERVL 585 chr1_NT_456213v1_random 8659 9925 CR1-11_Crp 225 - 8659 9925 0 2 361,715, 0,551, -,-, 209328 LINE CR1 585 chr1_NT_456215v1_random 16287 17887 SSU-rRNA_Hsa 891 + 16287 17887 0 2 1509,91, 0,1509, +,+, 209368 rRNA rRNA 585 chr1_NT_456218v1_random 824 1200 CR1-X 557 - 824 1200 0 2 174,202, 0,174, -,-, 209394 LINE CR1 585 chr1_NT_456219v1_random 71 1482 GGERVL-B-int 711 + 71 1482 0 3 488,566,355, 0,490,1056, +,+,+, 209406 LTR ERVL 585 chr1_NT_456219v1_random 1482 2488 GGLTR7A 819 + 1482 2488 0 2 587,419, 0,587, +,+, 209407 LTR ERV1 585 chr1_NT_456219v1_random 2535 8436 GGERVL-B-int 804 - 2535 8436 0 2 5330,571, 0,5330, -,-, 209409 LTR ERVL 585 chr1_NT_456219v1_random 8481 13353 GGLTR7-int 697 + 8481 13353 0 3 3975,359,535, 0,3978,4337, +,+,+, 209410 LTR ERV1 585 chr1_NT_456219v1_random 14406 17727 GGERVL-B-int 781 - 14406 17727 0 3 778,2064,477, 0,778,2844, -,-,-, 209416 LTR ERVL 585 chr1_NT_456220v1_random 17614 17739 (GCG)n 276 + 17614 17739 0 2 34,19, 0,106, +,+, 209443 Simple_repeat Simple_repeat 585 chr1_NT_456221v1_random 13569 14993 CR1-L3B_Croc 132 - 13569 14993 0 2 564,130, 0,1294, -,-, 209456 LINE CR1 585 chr1_NT_456224v1_random 5015 9454 LSU-rRNA_Hsa 667 - 5015 9454 0 3 1534,107,2748, 0,1584,1691, -,-,-, 209509 rRNA rRNA 585 chr1_NT_456225v1_random 8250 8926 GGLTR8A 318 + 8250 8926 0 2 231,445, 0,231, +,+, 209531 LTR ERVL 585 chr1_NT_456226v1_random 13093 17493 LSU-rRNA_Hsa 641 - 13093 17493 0 3 1450,108,2713, 0,1579,1687, -,-,-, 209553 rRNA rRNA 585 chr1_NT_456227v1_random 16763 17472 CR1-H 731 + 16763 17472 0 2 540,61, 0,648, +,+, 209575 LINE CR1 585 chr1_NT_456228v1_random 10817 15223 LSU-rRNA_Hsa 639 + 10817 15223 0 3 2704,109,1543, 0,2704,2863, +,+,+, 209591 rRNA rRNA 585 chr1_NT_456228v1_random 17144 17226 (T)n 1000 + 17144 17226 0 2 25,25, 0,57, +,+, 209600 Simple_repeat Simple_repeat 585 chr1_NT_456229v1_random 9097 10269 CR1-L3B_Croc 129 + 9097 10269 0 2 391,602, 0,570, +,+, 209609 LINE CR1 585 chr1_NT_456230v1_random 1983 3702 CR1-B2 655 - 1983 3702 0 2 314,1404, 0,315, -,-, 209615 LINE CR1 585 chr1_NT_456230v1_random 9745 10258 CR1-D2 595 - 9745 10258 0 2 72,307, 0,206, -,-, 209623 LINE CR1 585 chr1_NT_456231v1_random 6284 6853 GGERVL-C-int 266 + 6284 6853 0 2 166,403, 0,166, +,+, 209643 LTR ERVL 585 chr1_NT_456233v1_random 6673 8016 GGLTR10D-int 878 + 6673 8016 0 2 382,959, 0,384, +,+, 209659 LTR ERVK 585 chr1_NT_456234v1_random 8020 12320 LSU-rRNA_Hsa 715 - 8020 12320 0 3 1537,1521,624, 0,1694,3676, -,-,-, 209681 rRNA rRNA 585 chr1_NT_456235v1_random 3717 5346 SSU-rRNA_Hsa 663 + 3717 5346 0 3 760,115,599, 0,839,1030, +,+,+, 209692 rRNA rRNA 585 chr1_NT_456235v1_random 5567 5691 (CGCCGTC)n 366 + 5567 5691 0 2 29,53, 0,71, +,+, 209694 Simple_repeat Simple_repeat 585 chr1_NT_456235v1_random 7876 7958 (GCCGCCG)n 382 + 7876 7958 0 2 16,14, 0,68, +,+, 209697 Simple_repeat Simple_repeat 585 chr1_NT_456235v1_random 8626 12974 LSU-rRNA_Hsa 647 + 8626 12974 0 4 673,1531,107,1518, 0,1142,2673,2830, +,+,+,+, 209702 rRNA rRNA 585 chr1_NT_456235v1_random 16232 16345 (CTTCTTT)n 254 + 16232 16345 0 2 45,9, 0,104, +,+, 209716 Simple_repeat Simple_repeat 585 chr1_NT_456236v1_random 6344 11791 GGERV10_LTR 874 + 6344 11791 0 2 220,5225, 0,222, +,+, 209729 LTR ERVL 585 chr1_NT_456237v1_random 1072 2725 SSU-rRNA_Hsa 698 + 1072 2725 0 2 511,1093, 0,560, +,+, 209743 rRNA rRNA 585 chr1_NT_456237v1_random 5696 9561 LSU-rRNA_Hsa 642 + 5696 9561 0 3 662,1458,1001, 0,1150,2864, +,+,+, 209749 rRNA rRNA 585 chr1_NT_456240v1_random 13228 14231 CR1-Y2_Aves 327 - 13228 14231 0 2 517,402, 0,601, -,-, 209817 LINE CR1 585 chr1_NT_456241v1_random 673 2164 CR1-B2 588 - 673 2164 0 2 312,1178, 0,313, -,-, 209825 LINE CR1 585 chr1_NT_456241v1_random 8097 8610 CR1-D2 595 - 8097 8610 0 2 72,307, 0,206, -,-, 209833 LINE CR1 585 chr1_NT_456243v1_random 1357 5969 GGERVL18-int 736 + 1357 5969 0 4 297,2788,923,213, 0,360,3476,4399, +,+,+,+, 209875 LTR ERVL 585 chr1_NT_456243v1_random 8321 9739 GGERVL18-int 314 + 8321 9739 0 2 197,948, 0,470, +,+, 209879 LTR ERVL 585 chr1_NT_456243v1_random 9741 10487 GGERV10_LTR 327 + 9741 10487 0 2 327,416, 0,330, +,+, 209880 LTR ERVL 585 chr1_NT_456243v1_random 10977 16643 GGERV10_LTR 873 + 10977 16643 0 3 221,5339,105, 0,222,5561, +,+,+, 209882 LTR ERVL 585 chr1_NT_456244v1_random 2801 3583 LSU-rRNA_Hsa 576 + 2801 3583 0 2 684,83, 0,699, +,+, 209894 rRNA rRNA 585 chr1_NT_456244v1_random 3904 7113 LSU-rRNA_Hsa 637 + 3904 7113 0 3 1536,104,1506, 0,1555,1703, +,+,+, 209895 rRNA rRNA 585 chr1_NT_456247v1_random 8135 12547 LSU-rRNA_Hsa 660 - 8135 12547 0 3 1485,106,2701, 0,1584,1711, -,-,-, 209968 rRNA rRNA 585 chr1_NT_456247v1_random 15858 16573 SSU-rRNA_Hsa 730 - 15858 16573 0 2 218,405, 0,310, -,-, 209976 rRNA rRNA 585 chr1_NT_456248v1_random 8243 10178 CR1-Y 523 + 8243 10178 0 2 220,1240, 0,695, +,+, 209983 LINE CR1 585 chr1_NT_456252v1_random 3646 3753 (G)n 833 + 3646 3753 0 2 30,22, 0,85, +,+, 210034 Simple_repeat Simple_repeat 585 chr1_NT_456252v1_random 4177 8617 LSU-rRNA_Hsa 651 - 4177 8617 0 3 1534,108,2748, 0,1584,1692, -,-,-, 210038 rRNA rRNA 585 chr1_NT_456253v1_random 2772 3188 GGLTR3C1 160 + 2772 3188 0 2 211,191, 0,225, +,+, 210057 LTR ERVL 585 chr1_NT_456257v1_random 9472 13910 LSU-rRNA_Hsa 642 + 9472 13910 0 3 2747,107,1534, 0,2747,2904, +,+,+, 210127 rRNA rRNA 585 chr1_NT_456258v1_random 8863 13287 LSU-rRNA_Hsa 664 + 8863 13287 0 3 2718,107,1528, 0,2740,2896, +,+,+, 210153 rRNA rRNA 585 chr1_NT_456260v1_random 7300 11741 LSU-rRNA_Hsa 665 - 7300 11741 0 3 1535,108,2748, 0,1585,1693, -,-,-, 210196 rRNA rRNA 585 chr1_NT_456263v1_random 13704 15930 LSU-rRNA_Hsa 678 + 13704 15930 0 2 687,1120, 0,1106, +,+, 210238 rRNA rRNA 585 chr1_NT_456268v1_random 8264 12671 LSU-rRNA_Hsa 750 - 8264 12671 0 4 1532,1527,49,553, 0,1665,3603,3854, -,-,-,-, 210301 rRNA rRNA 585 chr1_NT_456269v1_random 8038 15914 CR1-C4 528 + 8038 15914 0 2 291,168, 0,7708, +,+, 210318 LINE CR1 585 chr1_NT_456270v1_random 13234 15540 CR1-Y2 280 - 13234 15540 0 2 1035,1191, 0,1115, -,-, 210334 LINE CR1 585 chr1_NT_456271v1_random 5794 6718 TguLTR5e 336 + 5794 6718 0 2 98,166, 0,758, +,+, 210341 LTR ERVL 585 chr1_NT_456271v1_random 6732 9108 CR1-D 538 + 6732 9108 0 2 1123,976, 0,1400, +,+, 210343 LINE CR1 585 chr1_NT_456276v1_random 1316 5233 LSU-rRNA_Hsa 593 - 1316 5233 0 2 54,3769, 0,148, -,-, 210408 rRNA rRNA 585 chr1_NT_456278v1_random 5258 5518 GGLTR12A 857 + 5258 5518 0 3 171,34,55, 0,171,205, +,+,+, 210447 LTR ERVL 585 chr1_NT_456280v1_random 10631 14704 LSU-rRNA_Hsa 723 - 10631 14704 0 3 1468,1475,540, 0,1537,3533, -,-,-, 210480 rRNA rRNA 585 chr1_NT_456281v1_random 5113 11243 CR1-Y1_Aves 432 - 5113 11243 0 2 274,115, 0,6015, -,-, 210495 LINE CR1 585 chr1_NT_456281v1_random 5639 6339 Charlie12_GG 500 - 5639 6339 0 2 514,186, 0,514, -,-, 210497 DNA hAT-Charlie 585 chr1_NT_456281v1_random 6339 6615 CR1-Y4 523 + 6339 6615 0 2 187,89, 0,187, +,+, 210498 LINE CR1 585 chr1_NT_456282v1_random 2099 3664 CR1-B2 403 - 2099 3664 0 3 47,88,1402, 0,74,163, -,-,-, 210508 LINE CR1 585 chr1_NT_456282v1_random 9707 10220 CR1-D2 595 - 9707 10220 0 2 72,307, 0,206, -,-, 210517 LINE CR1 585 chr1_NT_456284v1_random 2781 7220 LSU-rRNA_Hsa 627 - 2781 7220 0 3 1534,107,2748, 0,1584,1691, -,-,-, 210540 rRNA rRNA 585 chr1_NT_456285v1_random 1948 3065 CR1-F2 789 - 1948 3065 0 2 66,980, 0,137, -,-, 210554 LINE CR1 585 chr1_NT_456285v1_random 6895 8614 CR1-B2 652 + 6895 8614 0 2 1404,314, 0,1405, +,+, 210561 LINE CR1 585 chr1_NT_456286v1_random 13682 15265 SSU-rRNA_Hsa 628 + 13682 15265 0 2 748,787, 0,796, +,+, 210572 rRNA rRNA 585 chr1_NT_456287v1_random 3752 4187 LSU-rRNA_Hsa 599 + 3752 4187 0 2 314,120, 0,315, +,+, 210575 rRNA rRNA 585 chr1_NT_456287v1_random 4609 7866 LSU-rRNA_Hsa 705 + 4609 7866 0 2 1577,1638, 0,1619, +,+, 210576 rRNA rRNA 585 chr1_NT_456288v1_random 2149 6550 LSU-rRNA_Hsa 716 + 2149 6550 0 2 2701,1481, 0,2920, +,+, 210596 rRNA rRNA 585 chr1_NT_456289v1_random 7803 12174 LSU-rRNA_Hsa 685 + 7803 12174 0 3 687,1538,1515, 0,1166,2856, +,+,+, 210630 rRNA rRNA 585 chr1_NT_456292v1_random 10223 12900 LSU-rRNA_Hsa 602 + 10223 12900 0 3 690,1519,107, 0,1048,2570, +,+,+, 210699 rRNA rRNA 585 chr1_NT_456292v1_random 12951 14295 LSU-rRNA_Hsa 596 + 12951 14295 0 3 860,147,173, 0,941,1171, +,+,+, 210700 rRNA rRNA 585 chr1_NT_456293v1_random 11158 15123 LSU-rRNA_Hsa 652 + 11158 15123 0 3 2744,108,1063, 0,2744,2902, +,+,+, 210735 rRNA rRNA 585 chr1_NT_456294v1_random 5593 5868 CR1-Y4 644 + 5593 5868 0 2 192,83, 0,192, +,+, 210747 LINE CR1 585 chr1_NT_456294v1_random 10400 12331 CR1-Y 532 - 10400 12331 0 2 1240,220, 0,1711, -,-, 210755 LINE CR1 585 chr1_NT_456295v1_random 6862 7257 CR1-F0 478 + 6862 7257 0 2 338,20, 0,375, +,+, 210766 LINE CR1 585 chr1_NT_456297v1_random 7155 11594 LSU-rRNA_Hsa 665 + 7155 11594 0 3 2748,107,1534, 0,2748,2905, +,+,+, 210782 rRNA rRNA 585 chr1_NT_456298v1_random 8062 12084 LSU-rRNA_Hsa 671 + 8062 12084 0 7 429,79,1607,104,532,307,247, 0,508,1006,2621,2775,3395,3775, +,+,+,+,+,+,+, 210804 rRNA rRNA 585 chr1_NT_456300v1_random 1754 2998 CR1-Y4 444 + 1754 2998 0 2 1019,225, 0,1019, +,+, 210833 LINE CR1 585 chr1_NT_456300v1_random 3496 3810 CR1-C4 504 + 3496 3810 0 2 177,137, 0,177, +,+, 210835 LINE CR1 585 chr1_NT_456300v1_random 13390 14921 GGLTR7-int 314 - 13390 14921 0 3 311,60,185, 0,990,1346, -,-,-, 210846 LTR ERV1 585 chr1_NT_456305v1_random 6165 9379 LSU-rRNA_Hsa 763 + 6165 9379 0 2 1516,1569, 0,1645, +,+, 210904 rRNA rRNA 585 chr1_NT_456307v1_random 4818 5495 GGLTR7-int 776 - 4818 5495 0 3 163,259,216, 0,180,461, -,-,-, 210935 LTR ERV1 585 chr1_NT_456307v1_random 5733 9489 GGERV28_I-int 81 - 5733 9489 0 2 2000,1439, 0,2317, -,-, 210936 LTR ERVK 585 chr1_NT_456309v1_random 4261 8699 LSU-rRNA_Hsa 626 - 4261 8699 0 3 1535,108,2745, 0,1585,1693, -,-,-, 210966 rRNA rRNA 585 chr1_NT_456311v1_random 6552 7041 CR1-X1 582 + 6552 7041 0 2 291,198, 0,291, +,+, 211004 LINE CR1 585 chr1_NT_456311v1_random 9395 11332 CR1-E 716 + 9395 11332 0 2 742,1194, 0,743, +,+, 211005 LINE CR1 585 chr1_NT_456318v1_random 8664 11369 CR1-D 522 - 8664 11369 0 3 1121,200,326, 0,1121,2379, -,-,-, 211095 LINE CR1 585 chr1_NT_456319v1_random 4693 9115 LSU-rRNA_Hsa 659 + 4693 9115 0 3 2736,106,1532, 0,2736,2890, +,+,+, 211103 rRNA rRNA 585 chr1_NT_456320v1_random 2899 3597 Charlie12_GG 496 - 2899 3597 0 2 512,186, 0,512, -,-, 211129 DNA hAT-Charlie 585 chr1_NT_456320v1_random 3597 3870 CR1-Y4 624 + 3597 3870 0 2 185,88, 0,185, +,+, 211130 LINE CR1 585 chr1_NT_456320v1_random 5551 6251 Charlie12_GG 506 - 5551 6251 0 2 514,186, 0,514, -,-, 211133 DNA hAT-Charlie 585 chr1_NT_456320v1_random 6251 6526 CR1-Y4 659 + 6251 6526 0 2 186,89, 0,186, +,+, 211134 LINE CR1 585 chr1_NT_456320v1_random 7123 11051 CR1-Y3 532 - 7123 11051 0 4 308,679,208,1043, 0,894,2677,2885, -,-,-,-, 211135 LINE CR1 585 chr1_NT_456321v1_random 1469 1590 (ACGC)n 140 + 1469 1590 0 2 69,21, 0,100, +,+, 211147 Simple_repeat Simple_repeat 585 chr1_NT_456321v1_random 3312 4265 (GGATG)n 657 + 3312 4265 0 4 195,185,181,314, 0,230,443,639, +,+,+,+, 211153 Simple_repeat Simple_repeat 585 chr1_NT_456321v1_random 4586 4665 (G)n 928 + 4586 4665 0 2 29,19, 0,60, +,+, 211155 Simple_repeat Simple_repeat 585 chr1_NT_456321v1_random 9029 9774 (CCCCATTGGG)n 407 + 9029 9774 0 4 253,124,115,122, 0,288,458,623, +,+,+,+, 211164 Satellite Satellite 585 chr1_NT_456323v1_random 3645 8086 LSU-rRNA_Hsa 643 + 3645 8086 0 3 2748,108,1535, 0,2748,2906, +,+,+, 211208 rRNA rRNA 585 chr1_NT_456326v1_random 12984 13726 GGERVL-A-int 247 + 12984 13726 0 2 311,131, 0,611, +,+, 211252 LTR ERVL 585 chr1_NT_456327v1_random 13210 13317 (G)n 1000 + 13210 13317 0 2 25,27, 0,80, +,+, 211256 Simple_repeat Simple_repeat 585 chr1_NT_456330v1_random 7236 11605 LSU-rRNA_Hsa 624 + 7236 11605 0 2 2676,1560, 0,2809, +,+, 211287 rRNA rRNA 585 chr1_NT_456331v1_random 7404 11841 LSU-rRNA_Hsa 647 - 7404 11841 0 3 1535,108,2744, 0,1585,1693, -,-,-, 211324 rRNA rRNA 585 chr1_NT_456333v1_random 7399 8660 GGLTR11-int 320 - 7399 8660 0 4 260,194,54,138, 0,534,926,1123, -,-,-,-, 211352 LTR ERV1 585 chr1_NT_456335v1_random 4894 9331 LSU-rRNA_Hsa 664 + 4894 9331 0 3 2746,107,1534, 0,2746,2903, +,+,+, 211376 rRNA rRNA 585 chr1_NT_456340v1_random 7243 11649 LSU-rRNA_Hsa 710 - 7243 11649 0 2 1521,2729, 0,1677, -,-, 211449 rRNA rRNA 585 chr1_NT_456341v1_random 10488 11067 LSU-rRNA_Hsa 448 + 10488 11067 0 2 210,313, 0,266, +,+, 211472 rRNA rRNA 585 chr1_NT_456341v1_random 11548 13939 LSU-rRNA_Hsa 690 + 11548 13939 0 3 1522,105,642, 0,1544,1749, +,+,+, 211473 rRNA rRNA 585 chr1_NT_456342v1_random 7002 8655 CR1-D 714 - 7002 8655 0 2 472,115, 0,1538, -,-, 211481 LINE CR1 585 chr1_NT_456342v1_random 9289 9503 CR1-C3 465 - 9289 9503 0 2 95,119, 0,95, -,-, 211485 LINE CR1 585 chr1_NT_456342v1_random 10301 11735 CR1-X2 529 - 10301 11735 0 3 62,127,215, 0,540,1219, -,-,-, 211489 LINE CR1 585 chr1_NT_456344v1_random 13365 13697 CR1-X2 604 + 13365 13697 0 2 128,58, 0,274, +,+, 211520 LINE CR1 585 chr1_NT_456345v1_random 276 353 A-rich 362 + 276 353 0 2 39,20, 0,57, +,+, 211524 Low_complexity Low_complexity 585 chr1_NT_456346v1_random 4825 5082 (ACCCATTGGG)n 406 + 4825 5082 0 2 116,109, 0,148, +,+, 211547 Satellite Satellite 585 chr1_NT_456346v1_random 5312 5713 (ACCCATTGGG)n 356 + 5312 5713 0 2 118,221, 0,180, +,+, 211548 Satellite Satellite 585 chr1_NT_456348v1_random 5816 8752 CR1-C4 360 - 5816 8752 0 2 622,1236, 0,1700, -,-, 211569 LINE CR1 585 chr1_NT_456351v1_random 12314 12371 (CGC)n 498 + 12314 12371 0 2 16,6, 0,51, +,+, 211599 Simple_repeat Simple_repeat 585 chr1_NT_456352v1_random 1899 7770 GGERVL-B-int 771 + 1899 7770 0 2 472,5397, 0,474, +,+, 211602 LTR ERVL 585 chr1_NT_456353v1_random 2310 3686 CR1-B2 650 - 2310 3686 0 2 314,1061, 0,315, -,-, 211612 LINE CR1 585 chr1_NT_456356v1_random 4479 8912 LSU-rRNA_Hsa 664 + 4479 8912 0 3 2744,107,1532, 0,2744,2901, +,+,+, 211647 rRNA rRNA 585 chr1_NT_456358v1_random 10448 11152 CR1-F2 617 + 10448 11152 0 2 412,285, 0,419, +,+, 211682 LINE CR1 585 chr1_NT_456360v1_random 4103 4482 CR1-X 555 - 4103 4482 0 2 178,201, 0,178, -,-, 211697 LINE CR1 585 chr1_NT_456360v1_random 7488 7867 CR1-X 555 - 7488 7867 0 2 178,201, 0,178, -,-, 211701 LINE CR1 585 chr1_NT_456360v1_random 10872 11251 CR1-X 555 - 10872 11251 0 2 178,201, 0,178, -,-, 211705 LINE CR1 585 chr1_NT_456361v1_random 7519 10259 CR1-Y 469 + 7519 10259 0 2 177,2071, 0,669, +,+, 211713 LINE CR1 585 chr1_NT_456361v1_random 12414 12688 CR1-Y4 671 - 12414 12688 0 2 108,165, 0,109, -,-, 211718 LINE CR1 585 chr1_NT_456362v1_random 5786 6122 GGERV10_LTR 594 - 5786 6122 0 2 159,85, 0,251, -,-, 211723 LTR ERVL 585 chr1_NT_456362v1_random 6205 8309 CR1-D 620 + 6205 8309 0 2 841,988, 0,1116, +,+, 211725 LINE CR1 585 chr1_NT_456366v1_random 5500 5792 A-rich 554 + 5500 5792 0 2 196,46, 0,246, +,+, 211782 Low_complexity Low_complexity 585 chr1_NT_456367v1_random 4949 6581 SSU-rRNA_Hsa 685 + 4949 6581 0 3 203,767,616, 0,216,1016, +,+,+, 211794 rRNA rRNA 585 chr1_NT_456367v1_random 9920 13237 LSU-rRNA_Hsa 689 + 9920 13237 0 3 682,1510,478, 0,1158,2839, +,+,+, 211804 rRNA rRNA 585 chr1_NT_456372v1_random 6575 10443 LSU-rRNA_Hsa 530 - 6575 10443 0 6 185,1234,107,1017,282,445, 0,201,1483,1611,2676,3423, -,-,-,-,-,-, 211851 rRNA rRNA 585 chr1_NT_456374v1_random 4241 4986 GGLTR8A 395 + 4241 4986 0 3 135,273,71, 0,191,674, +,+,+, 211868 LTR ERVL 585 chr1_NT_456375v1_random 4782 9189 LSU-rRNA_Hsa 640 + 4782 9189 0 3 2719,107,1484, 0,2719,2923, +,+,+, 211889 rRNA rRNA 585 chr1_NT_456376v1_random 3143 4353 SSU-rRNA_Hsa 646 + 3143 4353 0 2 983,180, 0,1030, +,+, 211916 rRNA rRNA 585 chr1_NT_456376v1_random 7573 9870 LSU-rRNA_Hsa 633 + 7573 9870 0 2 686,1129, 0,1168, +,+, 211928 rRNA rRNA 585 chr1_NT_456376v1_random 9892 11818 LSU-rRNA_Hsa 733 + 9892 11818 0 2 296,1630, 0,296, +,+, 211929 rRNA rRNA 585 chr1_NT_456377v1_random 1110 1911 GGLTR8A 113 - 1110 1911 0 2 278,415, 0,386, -,-, 211939 LTR ERVL 585 chr1_NT_456377v1_random 2240 2634 GGLTR8B 427 + 2240 2634 0 2 88,280, 0,114, +,+, 211940 LTR ERVL 585 chr1_NT_456377v1_random 6517 9692 CR1-C3 634 - 6517 9692 0 2 1929,1002, 0,2173, -,-, 211946 LINE CR1 585 chr1_NT_456377v1_random 10835 11229 CR1-Y2_Aves 358 - 10835 11229 0 2 305,76, 0,318, -,-, 211948 LINE CR1 585 chr1_NT_456378v1_random 5329 7229 CR1-Y4 402 - 5329 7229 0 2 22,1878, 0,22, -,-, 211956 LINE CR1 585 chr1_NT_456379v1_random 11582 12985 LSU-rRNA_Hsa 690 + 11582 12985 0 2 695,237, 0,1166, +,+, 211978 rRNA rRNA 585 chr1_NT_456380v1_random 5264 9390 LSU-rRNA_Hsa 686 - 5264 9390 0 4 1208,92,105,2663, 0,1242,1337,1463, -,-,-,-, 211991 rRNA rRNA 585 chr1_NT_456384v1_random 4308 8727 LSU-rRNA_Hsa 639 + 4308 8727 0 3 2745,104,1520, 0,2745,2899, +,+,+, 212031 rRNA rRNA 585 chr1_NT_456385v1_random 5205 9155 LSU-rRNA_Hsa 533 - 5205 9155 0 3 1177,1664,694, 0,1236,3256, -,-,-, 212069 rRNA rRNA 585 chr1_NT_456391v1_random 3891 8371 LSU-rRNA_Hsa 646 + 3891 8371 0 2 2740,1575, 0,2905, +,+, 212130 rRNA rRNA 585 chr1_NT_456391v1_random 10591 10703 (TTTC)n 260 + 10591 10703 0 2 42,7, 0,105, +,+, 212143 Simple_repeat Simple_repeat 585 chr1_NT_456394v1_random 3964 4683 CR1-D2 545 + 3964 4683 0 3 112,442,157, 0,120,562, +,+,+, 212170 LINE CR1 585 chr1_NT_456395v1_random 6651 10917 LSU-rRNA_Hsa 582 + 6651 10917 0 3 2600,105,1494, 0,2621,2772, +,+,+, 212184 rRNA rRNA 585 chr1_NT_456400v1_random 4003 6741 CR1-Y 463 - 4003 6741 0 2 2068,181, 0,2557, -,-, 212240 LINE CR1 585 chr1_NT_456404v1_random 11306 12417 GGLTR3F1 671 + 11306 12417 0 2 501,609, 0,502, +,+, 212293 LTR ERVL 585 chr1_NT_456405v1_random 3081 3487 ENS1B-LTR 634 + 3081 3487 0 2 209,197, 0,209, +,+, 212297 LTR ERVL 585 chr1_NT_456405v1_random 5086 10521 GGERV10_LTR 882 + 5086 10521 0 2 219,5215, 0,220, +,+, 212303 LTR ERVL 585 chr1_NT_456410v1_random 938 1976 CR1-F 483 + 938 1976 0 2 106,57, 0,981, +,+, 212342 LINE CR1 585 chr1_NT_456410v1_random 2583 3045 CR1-Y4 391 + 2583 3045 0 2 196,158, 0,304, +,+, 212344 LINE CR1 585 chr1_NT_456411v1_random 5758 7477 CR1-B2 650 - 5758 7477 0 2 315,1403, 0,316, -,-, 212360 LINE CR1 585 chr1_NT_456412v1_random 586 1295 CR1-Y 649 - 586 1295 0 2 656,53, 0,656, -,-, 212366 LINE CR1 585 chr1_NT_456412v1_random 9063 10195 CR1-C4 584 - 9063 10195 0 2 496,571, 0,561, -,-, 212374 LINE CR1 585 chr1_NT_456413v1_random 5268 8053 LSU-rRNA_Hsa 699 + 5268 8053 0 3 1093,106,1546, 0,1113,1239, +,+,+, 212381 rRNA rRNA 585 chr1_NT_456416v1_random 1793 2406 CR1-E 560 - 1793 2406 0 2 426,185, 0,428, -,-, 212421 LINE CR1 585 chr1_NT_456418v1_random 6712 11137 LSU-rRNA_Hsa 701 - 6712 11137 0 3 1534,85,2737, 0,1583,1688, -,-,-, 212474 rRNA rRNA 585 chr1_NT_456421v1_random 8060 12057 LSU-rRNA_Hsa 710 + 8060 12057 0 2 2746,1048, 0,2949, +,+, 212508 rRNA rRNA 585 chr1_NT_456423v1_random 2808 7184 LSU-rRNA_Hsa 711 + 2808 7184 0 4 681,1519,86,1549, 0,1159,2720,2827, +,+,+,+, 212519 rRNA rRNA 585 chr1_NT_456430v1_random 4380 4482 (C)n 818 + 4380 4482 0 2 24,23, 0,79, +,+, 212597 Simple_repeat Simple_repeat 585 chr1_NT_456434v1_random 8074 9203 CR1-Y 260 + 8074 9203 0 3 41,38,236, 0,247,893, +,+,+, 212662 LINE CR1 585 chr1_NT_456434v1_random 9204 10428 CR1-Y4 543 + 9204 10428 0 2 644,415, 0,809, +,+, 212665 LINE CR1 585 chr1_NT_456435v1_random 1377 1981 GGLTR3A 610 + 1377 1981 0 2 442,123, 0,481, +,+, 212671 LTR ERVL 585 chr1_NT_456436v1_random 4072 8376 LSU-rRNA_Hsa 582 + 4072 8376 0 2 2669,1517, 0,2787, +,+, 212689 rRNA rRNA 585 chr1_NT_456439v1_random 2858 3361 CR1-D2 545 - 2858 3361 0 2 71,298, 0,205, -,-, 212721 LINE CR1 585 chr1_NT_456445v1_random 1233 5340 LSU-rRNA_Hsa 641 + 1233 5340 0 3 682,1452,1478, 0,962,2629, +,+,+, 212783 rRNA rRNA 585 chr1_NT_456446v1_random 2249 3352 CR1-11_Crp 191 - 2249 3352 0 2 277,164, 0,939, -,-, 212800 LINE CR1 585 chr1_NT_456446v1_random 10233 10684 Char12Mar1_GG 410 - 10233 10684 0 2 139,312, 0,139, -,-, 212810 DNA hAT-Charlie 585 chr1_NT_456447v1_random 2832 6991 LSU-rRNA_Hsa 776 + 2832 6991 0 5 549,792,617,106,1385, 0,953,1839,2478,2774, +,+,+,+,+, 212820 rRNA rRNA 585 chr1_NT_456447v1_random 9009 9141 (TTTC)n 264 + 9009 9141 0 2 38,10, 0,122, +,+, 212833 Simple_repeat Simple_repeat 585 chr1_NT_456448v1_random 3521 5936 GGERVL-C-int 615 - 3521 5936 0 3 568,144,1647, 0,568,768, -,-,-, 212846 LTR ERVL 585 chr1_NT_456448v1_random 9605 11418 CR1-C2 704 - 9605 11418 0 2 956,833, 0,980, -,-, 212852 LINE CR1 585 chr1_NT_456452v1_random 2922 4317 Char12Mar1_GG 623 - 2922 4317 0 2 34,479, 0,916, -,-, 212870 DNA hAT-Charlie 585 chr1_NT_456455v1_random 3753 9211 GGERV10_LTR 818 - 3753 9211 0 2 5234,223, 0,5235, -,-, 212904 LTR ERVL 585 chr1_NT_456456v1_random 10989 11550 SSU-rRNA_Hsa 769 - 10989 11550 0 2 392,120, 0,441, -,-, 212941 rRNA rRNA 585 chr1_NT_456462v1_random 4532 6731 CR1-D 660 - 4532 6731 0 2 320,1852, 0,347, -,-, 212989 LINE CR1 585 chr1_NT_456464v1_random 4075 7992 LSU-rRNA_Hsa 608 + 4075 7992 0 2 695,2648, 0,1269, +,+, 213004 rRNA rRNA 585 chr1_NT_456464v1_random 10601 10675 (TCCCC)n 402 + 10601 10675 0 2 6,48, 0,26, +,+, 213014 Simple_repeat Simple_repeat 585 chr1_NT_456467v1_random 10204 11329 CR1-C 630 + 10204 11329 0 2 224,901, 0,224, +,+, 213032 LINE CR1 585 chr1_NT_456476v1_random 2765 3312 GGERV28_LTR 562 + 2765 3312 0 2 271,214, 0,333, +,+, 213103 LTR ERVK 585 chr1_NT_456477v1_random 1426 1974 CR1-H 764 - 1426 1974 0 2 419,124, 0,424, -,-, 213114 LINE CR1 585 chr1_NT_456482v1_random 7731 8527 ENS1B-LTR 883 - 7731 8527 0 2 525,181, 0,615, -,-, 213154 LTR ERVL 585 chr1_NT_456484v1_random 7085 7436 CR1-X2 488 + 7085 7436 0 2 103,248, 0,103, +,+, 213187 LINE CR1 585 chr1_NT_456486v1_random 7287 11136 LSU-rRNA_Hsa 691 + 7287 11136 0 2 2732,900, 0,2949, +,+, 213202 rRNA rRNA 585 chr1_NT_456489v1_random 7045 7285 (GCGG)n 320 + 7045 7285 0 2 108,71, 0,169, +,+, 213241 Simple_repeat Simple_repeat 585 chr1_NT_456490v1_random 9625 11122 CR1-B2 550 - 9625 11122 0 2 300,1192, 0,305, -,-, 213262 LINE CR1 585 chr1_NT_456493v1_random 9120 10993 LSU-rRNA_Hsa 692 - 9120 10993 0 4 835,204,105,534, 0,986,1234,1339, -,-,-,-, 213302 rRNA rRNA 585 chr1_NT_456496v1_random 3942 4501 CR1-F2 597 + 3942 4501 0 2 64,411, 0,148, +,+, 213322 LINE CR1 585 chr1_NT_456497v1_random 8260 8789 GGLTR3G2 405 - 8260 8789 0 2 62,432, 0,97, -,-, 213332 LTR ERVL 585 chr1_NT_456500v1_random 3656 4831 CR1-Y2_Aves 192 + 3656 4831 0 2 537,600, 0,575, +,+, 213351 LINE CR1 585 chr1_NT_456502v1_random 8059 10857 GGERVL18-int 639 + 8059 10857 0 3 264,566,1564, 0,319,1234, +,+,+, 213375 LTR ERVL 585 chr1_NT_456505v1_random 4024 4553 CR1-Y1_Aves 366 - 4024 4553 0 2 176,350, 0,179, -,-, 213407 LINE CR1 585 chr1_NT_456506v1_random 8817 9822 CR1-Y2_Aves 242 - 8817 9822 0 3 629,109,118, 0,728,887, -,-,-, 213428 LINE CR1 585 chr1_NT_456508v1_random 4102 4614 CR1-D2 582 - 4102 4614 0 2 72,306, 0,206, -,-, 213463 LINE CR1 585 chr1_NT_456511v1_random 4871 4927 (CGCCCG)n 598 + 4871 4927 0 2 15,6, 0,50, +,+, 213503 Simple_repeat Simple_repeat 585 chr1_NT_456511v1_random 5149 9270 LSU-rRNA_Hsa 736 - 5149 9270 0 3 1149,76,2671, 0,1325,1450, -,-,-, 213506 rRNA rRNA 585 chr1_NT_456513v1_random 3205 4796 CR1-C2 670 - 3205 4796 0 3 422,778,391, 0,422,1200, -,-,-, 213526 LINE CR1 585 chr1_NT_456513v1_random 9857 10744 CR1-C2 681 - 9857 10744 0 2 427,460, 0,427, -,-, 213529 LINE CR1 585 chr1_NT_456515v1_random 1610 6074 LSU-rRNA_Hsa 622 + 1610 6074 0 3 2780,107,1475, 0,2780,2989, +,+,+, 213538 rRNA rRNA 585 chr1_NT_456516v1_random 4028 4908 CR1-C4 461 + 4028 4908 0 2 100,696, 0,184, +,+, 213558 LINE CR1 585 chr1_NT_456518v1_random 7934 9457 (CATG)n 357 + 7934 9457 0 6 175,366,177,169,275,173, 0,217,604,834,1064,1350, +,+,+,+,+,+, 213577 Simple_repeat Simple_repeat 585 chr1_NT_456519v1_random 2645 3982 CR1-Y4 264 - 2645 3982 0 2 166,392, 0,945, -,-, 213584 LINE CR1 585 chr1_NT_456519v1_random 9475 9896 (CCCTAA)n 643 + 9475 9896 0 2 206,178, 0,243, +,+, 213591 Simple_repeat Simple_repeat 585 chr1_NT_456527v1_random 3415 7831 LSU-rRNA_Hsa 635 + 3415 7831 0 4 2713,107,1190,230, 0,2735,2943,4186, +,+,+,+, 213659 rRNA rRNA 585 chr1_NT_456530v1_random 311 797 CR1-Y4 505 - 311 797 0 2 161,311, 0,175, -,-, 213686 LINE CR1 585 chr1_NT_456534v1_random 5057 9438 LSU-rRNA_Hsa 606 + 5057 9438 0 3 2707,104,1559, 0,2707,2822, +,+,+, 213722 rRNA rRNA 585 chr1_NT_456538v1_random 9332 10348 CR1-Y3 562 - 9332 10348 0 2 755,261, 0,755, -,-, 213767 LINE CR1 585 chr1_NT_456540v1_random 760 4942 LSU-rRNA_Hsa 646 - 760 4942 0 3 141,1211,2670, 0,175,1512, -,-,-, 213782 rRNA rRNA 585 chr1_NT_456541v1_random 5660 6139 GGLTR7-int 279 - 5660 6139 0 2 157,114, 0,365, -,-, 213794 LTR ERV1 585 chr1_NT_456543v1_random 8257 9331 GGLTR5B 461 + 8257 9331 0 2 215,312, 0,762, +,+, 213814 LTR ERVL 585 chr1_NT_456549v1_random 1764 2087 GGCAN 638 + 1764 2087 0 2 183,87, 0,236, +,+, 213869 Unknown Unknown 585 chr1_NT_456554v1_random 4330 4724 Char12Mar1_GG 462 - 4330 4724 0 2 173,138, 0,256, -,-, 213909 DNA hAT-Charlie 585 chr1_NT_456554v1_random 9432 10077 CR1-Y1_Aves 348 - 9432 10077 0 3 187,175,236, 0,234,409, -,-,-, 213919 LINE CR1 585 chr1_NT_456555v1_random 2021 6256 LSU-rRNA_Hsa 649 - 2021 6256 0 4 170,1117,107,2710, 0,261,1401,1525, -,-,-,-, 213927 rRNA rRNA 585 chr1_NT_456555v1_random 9684 10063 SSU-rRNA_Hsa 932 - 9684 10063 0 2 264,85, 0,294, -,-, 213938 rRNA rRNA 585 chr1_NT_456556v1_random 4112 4955 CR1-D2 632 + 4112 4955 0 2 168,675, 0,168, +,+, 213943 LINE CR1 585 chr1_NT_456556v1_random 5997 7246 CR1-X 573 - 5997 7246 0 2 849,398, 0,851, -,-, 213946 LINE CR1 585 chr1_NT_456556v1_random 7247 7814 CR1-X2 653 + 7247 7814 0 2 83,484, 0,83, +,+, 213947 LINE CR1 585 chr1_NT_456558v1_random 6722 7356 CR1-D2 615 - 6722 7356 0 2 497,137, 0,497, -,-, 213966 LINE CR1 585 chr1_NT_456558v1_random 9369 10132 GGLTR8A 428 - 9369 10132 0 2 262,269, 0,494, -,-, 213967 LTR ERVL 585 chr1_NT_456560v1_random 2531 6773 LSU-rRNA_Hsa 630 - 2531 6773 0 4 815,565,110,2695, 0,823,1410,1547, -,-,-,-, 213987 rRNA rRNA 585 chr1_NT_456563v1_random 6226 6341 (TA)n 677 + 6226 6341 0 2 43,55, 0,60, +,+, 214017 Simple_repeat Simple_repeat 585 chr1_NT_456565v1_random 3918 4890 CR1-Y 716 + 3918 4890 0 2 611,311, 0,661, +,+, 214033 LINE CR1 585 chr1_NT_456567v1_random 8885 9394 GGLTR3G2 292 - 8885 9394 0 2 159,350, 0,159, -,-, 214053 LTR ERVL 585 chr1_NT_456571v1_random 1162 1986 GGLTR8B 353 - 1162 1986 0 3 164,273,80, 0,466,744, -,-,-, 214070 LTR ERVL 585 chr1_NT_456571v1_random 3284 3930 CR1-Y2_Aves 249 + 3284 3930 0 3 230,136,263, 0,232,383, +,+,+, 214073 LINE CR1 585 chr1_NT_456571v1_random 6274 6973 GGLTR5A 502 + 6274 6973 0 2 93,267, 0,432, +,+, 214075 LTR ERVL 585 chr1_NT_456573v1_random 2267 5618 CR1-C3 668 + 2267 5618 0 3 1106,1809,431, 0,1106,2920, +,+,+, 214091 LINE CR1 585 chr1_NT_456576v1_random 1852 2937 CR1-H2 504 - 1852 2937 0 2 339,746, 0,339, -,-, 214112 LINE CR1 585 chr1_NT_456580v1_random 3461 4884 CR1-G 878 + 3461 4884 0 2 463,960, 0,463, +,+, 214145 LINE CR1 585 chr1_NT_456581v1_random 2160 2686 GGERV28_LTR 478 + 2160 2686 0 2 269,195, 0,331, +,+, 214151 LTR ERVK 585 chr1_NT_456585v1_random 4044 4314 X1_LINE 500 + 4044 4314 0 2 120,99, 0,171, +,+, 214186 LINE CR1 585 chr1_NT_456591v1_random 6440 6509 (CCGGCG)n 418 + 6440 6509 0 2 13,8, 0,61, +,+, 214234 Simple_repeat Simple_repeat 585 chr1_NT_456591v1_random 7974 8033 (CGCC)n 510 + 7974 8033 0 2 11,14, 0,45, +,+, 214244 Simple_repeat Simple_repeat 585 chr1_NT_456593v1_random 7253 9682 LSU-rRNA_Hsa 703 + 7253 9682 0 4 538,719,734,69, 0,907,1626,2360, +,+,+,+, 214270 rRNA rRNA 585 chr1_NT_456594v1_random 6108 7711 GGLTR7-int 284 - 6108 7711 0 2 843,602, 0,1001, -,-, 214277 LTR ERV1 585 chr1_NT_456596v1_random 5188 7062 GGLTR8B 233 + 5188 7062 0 3 568,150,240, 0,1457,1634, +,+,+, 214287 LTR ERVL 585 chr1_NT_456600v1_random 6867 8238 GGERVL-A-int 321 - 6867 8238 0 3 710,419,230, 0,710,1141, -,-,-, 214314 LTR ERVL 585 chr1_NT_456600v1_random 9312 9477 GGLTR5B 630 - 9312 9477 0 2 100,49, 0,116, -,-, 214315 LTR ERVL 585 chr1_NT_456603v1_random 1964 6300 LSU-rRNA_Hsa 639 + 1964 6300 0 4 691,1512,108,1485, 0,1167,2693,2851, +,+,+,+, 214333 rRNA rRNA 585 chr1_NT_456605v1_random 3418 7843 LSU-rRNA_Hsa 657 - 3418 7843 0 3 1535,108,2733, 0,1584,1692, -,-,-, 214370 rRNA rRNA 585 chr1_NT_456611v1_random 1006 1231 GGLTR8B 180 - 1006 1231 0 2 124,75, 0,150, -,-, 214404 LTR ERVL 585 chr1_NT_456617v1_random 6145 9332 LSU-rRNA_Hsa 741 - 6145 9332 0 2 1496,1528, 0,1659, -,-, 214470 rRNA rRNA 585 chr1_NT_456618v1_random 8353 9425 GGERVL-C-int 647 - 8353 9425 0 2 516,556, 0,516, -,-, 214476 LTR ERVL 585 chr1_NT_456619v1_random 1320 3029 CR1-B2 645 + 1320 3029 0 2 1395,313, 0,1396, +,+, 214479 LINE CR1 585 chr1_NT_456622v1_random 5526 6419 CR1-F2 597 - 5526 6419 0 3 497,109,167, 0,497,726, -,-,-, 214514 LINE CR1 585 chr1_NT_456625v1_random 5002 9049 LSU-rRNA_Hsa 748 - 5002 9049 0 5 1534,107,1551,211,125, 0,1583,1690,3707,3922, -,-,-,-,-, 214553 rRNA rRNA 585 chr1_NT_456627v1_random 1621 5928 LSU-rRNA_Hsa 570 + 1621 5928 0 2 2651,1495, 0,2812, +,+, 214569 rRNA rRNA 585 chr1_NT_456627v1_random 8781 8911 (T)n 868 + 8781 8911 0 2 62,52, 0,78, +,+, 214583 Simple_repeat Simple_repeat 585 chr1_NT_456631v1_random 5992 9279 LSU-rRNA_Cel 488 - 5992 9279 0 2 2609,338, 0,2949, -,-, 214623 rRNA rRNA 585 chr1_NT_456632v1_random 1020 4204 CR1-C4 260 - 1020 4204 0 2 2373,339, 0,2845, -,-, 214626 LINE CR1 585 chr1_NT_456632v1_random 6446 8404 CR1-D2 550 + 6446 8404 0 3 119,877,280, 0,763,1678, +,+,+, 214631 LINE CR1 585 chr1_NT_456643v1_random 8141 8921 CR1-L3A_Croc 63 - 8141 8921 0 2 321,459, 0,321, -,-, 214702 LINE CR1 585 chr1_NT_456645v1_random 3320 3867 GGERV28_LTR 559 - 3320 3867 0 2 214,271, 0,276, -,-, 214711 LTR ERVK 585 chr1_NT_456645v1_random 4229 6634 GGLTR7A 721 + 4229 6634 0 3 409,170,1775, 0,459,630, +,+,+, 214713 LTR ERV1 585 chr1_NT_456645v1_random 6634 9225 ENS3-int 869 + 6634 9225 0 3 939,1275,359, 0,939,2232, +,+,+, 214715 LTR ERVL 585 chr1_NT_456653v1_random 3883 5653 CR1-Y 494 + 3883 5653 0 2 178,1155, 0,615, +,+, 214769 LINE CR1 585 chr1_NT_456658v1_random 2781 7000 LSU-rRNA_Hsa 651 - 2781 7000 0 3 1533,108,2529, 0,1582,1690, -,-,-, 214810 rRNA rRNA 585 chr1_NT_456660v1_random 6637 6734 (TGTTT)n 568 + 6637 6734 0 2 9,10, 0,87, +,+, 214834 Simple_repeat Simple_repeat 585 chr1_NT_456663v1_random 4783 8007 LSU-rRNA_Hsa 711 - 4783 8007 0 3 1533,108,1534, 0,1582,1690, -,-,-, 214869 rRNA rRNA 585 chr1_NT_456663v1_random 8348 9070 LSU-rRNA_Hsa 543 - 8348 9070 0 2 80,629, 0,93, -,-, 214870 rRNA rRNA 585 chr1_NT_456675v1_random 8567 9019 CR1-C 451 + 8567 9019 0 2 57,356, 0,96, +,+, 214935 LINE CR1 585 chr1_NT_456676v1_random 6371 7729 CR1-Y4 501 + 6371 7729 0 2 635,398, 0,960, +,+, 214938 LINE CR1 585 chr1_NT_456678v1_random 1057 1144 (ATAATTA)n 368 + 1057 1144 0 2 41,24, 0,63, +,+, 214948 Simple_repeat Simple_repeat 585 chr1_NT_456678v1_random 3644 7148 GGERVL-A-int 741 + 3644 7148 0 3 2849,43,563, 0,2893,2941, +,+,+, 214951 LTR ERVL 585 chr1_NT_456686v1_random 5480 5591 (CGCCC)n 320 + 5480 5591 0 2 77,9, 0,102, +,+, 215018 Simple_repeat Simple_repeat 585 chr1_NT_456686v1_random 5618 5728 (G)n 1000 + 5618 5728 0 2 32,41, 0,69, +,+, 215020 Simple_repeat Simple_repeat 585 chr1_NT_456691v1_random 4696 8848 LSU-rRNA_Hsa 577 - 4696 8848 0 3 618,537,2591, 0,852,1561, -,-,-, 215065 rRNA rRNA 585 chr1_NT_456692v1_random 4683 8824 LSU-rRNA_Hsa 705 + 4683 8824 0 3 2678,86,1286, 0,2718,2855, +,+,+, 215071 rRNA rRNA 585 chr1_NT_456697v1_random 4167 7083 LSU-rRNA_Hsa 689 - 4167 7083 0 3 1524,109,1232, 0,1575,1684, -,-,-, 215121 rRNA rRNA 585 chr1_NT_456699v1_random 7763 8088 CR1-C2 600 - 7763 8088 0 2 245,80, 0,245, -,-, 215138 LINE CR1 585 chr1_NT_456702v1_random 8179 8508 Charlie7a_Aves 450 - 8179 8508 0 2 101,140, 0,189, -,-, 215149 DNA hAT-Charlie 585 chr1_NT_456704v1_random 3651 4355 GGLTR3E3 710 - 3651 4355 0 2 151,395, 0,309, -,-, 215163 LTR ERVL 585 chr1_NT_456705v1_random 3534 3588 (TTTTTG)n 544 + 3534 3588 0 2 7,8, 0,46, +,+, 215175 Simple_repeat Simple_repeat 585 chr1_NT_456709v1_random 415 1318 CR1-E 775 + 415 1318 0 2 402,501, 0,402, +,+, 215203 LINE CR1 585 chr1_NT_456711v1_random 979 5139 LSU-rRNA_Hsa 694 + 979 5139 0 4 520,1499,107,1376, 0,1060,2579,2784, +,+,+,+, 215215 rRNA rRNA 585 chr1_NT_456711v1_random 7232 7325 (CTTT)n 258 + 7232 7325 0 2 26,9, 0,84, +,+, 215225 Simple_repeat Simple_repeat 585 chr1_NT_456713v1_random 875 1874 REP131 209 - 875 1874 0 2 71,798, 0,201, -,-, 215235 DNA? DNA? 585 chr1_NT_456718v1_random 6059 7186 SSU-rRNA_Hsa 735 + 6059 7186 0 2 649,478, 0,649, +,+, 215276 rRNA rRNA 585 chr1_NT_456720v1_random 6201 7720 SSU-rRNA_Hsa 787 + 6201 7720 0 2 177,1240, 0,279, +,+, 215309 rRNA rRNA 585 chr1_NT_456729v1_random 1066 2275 CR1-B2 584 + 1066 2275 0 2 959,250, 0,959, +,+, 215382 LINE CR1 585 chr1_NT_456730v1_random 6778 7590 CR1-Y3 687 - 6778 7590 0 2 313,471, 0,341, -,-, 215393 LINE CR1 585 chr1_NT_456731v1_random 7338 7400 (CTTTTT)n 716 + 7338 7400 0 2 12,21, 0,41, +,+, 215398 Simple_repeat Simple_repeat 585 chr1_NT_456733v1_random 1132 3846 CR1-Y 449 - 1132 3846 0 2 2051,174, 0,2540, -,-, 215404 LINE CR1 585 chr1_NT_456736v1_random 4645 5420 CR1-H 769 - 4645 5420 0 2 353,421, 0,354, -,-, 215423 LINE CR1 585 chr1_NT_456737v1_random 2261 3052 CR1-Y1_Aves 192 - 2261 3052 0 2 196,534, 0,257, -,-, 215427 LINE CR1 585 chr1_NT_456747v1_random 1881 1972 CR1-C4 710 - 1881 1972 0 2 48,43, 0,48, -,-, 215471 LINE CR1 585 chr1_NT_456747v1_random 3828 4038 CR1-C4 676 - 3828 4038 0 3 43,58,37, 0,115,173, -,-,-, 215473 LINE CR1 585 chr1_NT_456755v1_random 7353 7415 (A)n 1000 + 7353 7415 0 2 24,18, 0,44, +,+, 215525 Simple_repeat Simple_repeat 585 chr1_NT_456757v1_random 6314 7006 GGLTR5A 657 - 6314 7006 0 2 444,82, 0,610, -,-, 215541 LTR ERVL 585 chr1_NT_456758v1_random 1597 2277 Char12Mar1_GG 678 - 1597 2277 0 2 102,274, 0,406, -,-, 215546 DNA hAT-Charlie 585 chr1_NT_456759v1_random 5104 7831 LSU-rRNA_Hsa 618 - 5104 7831 0 3 1464,109,1086, 0,1513,1641, -,-,-, 215570 rRNA rRNA 585 chr1_NT_456760v1_random 5178 5627 Charlie12_GG 670 - 5178 5627 0 2 78,371, 0,78, -,-, 215579 DNA hAT-Charlie 585 chr1_NT_456760v1_random 7432 7879 CR1-F0 681 + 7432 7879 0 2 111,264, 0,183, +,+, 215581 LINE CR1 585 chr1_NT_456770v1_random 3432 3500 (TTCTCT)n 384 + 3432 3500 0 2 22,21, 0,47, +,+, 215639 Simple_repeat Simple_repeat 585 chr1_NT_456785v1_random 3178 7315 LSU-rRNA_Hsa 712 - 3178 7315 0 3 1449,1586,305, 0,1671,3832, -,-,-, 215777 rRNA rRNA 585 chr1_NT_456786v1_random 3602 4012 CR1-G 300 + 3602 4012 0 2 105,249, 0,161, +,+, 215788 LINE CR1 585 chr1_NT_456788v1_random 4697 7544 LSU-rRNA_Hsa 695 - 4697 7544 0 2 1389,1417, 0,1430, -,-, 215814 rRNA rRNA 585 chr1_NT_456789v1_random 1172 7106 GGERVL-A-int 751 - 1172 7106 0 4 1039,1583,1833,492, 0,1647,3609,5442, -,-,-,-, 215818 LTR ERVL 585 chr1_NT_456790v1_random 1962 3390 LSU-rRNA_Hsa 564 + 1962 3390 0 2 240,1101, 0,327, +,+, 215825 rRNA rRNA 585 chr1_NT_456790v1_random 6900 7034 (T)n 882 + 6900 7034 0 2 101,18, 0,116, +,+, 215839 Simple_repeat Simple_repeat 585 chr1_NT_456792v1_random 2013 3426 CR1-L3B_Croc 208 + 2013 3426 0 2 270,552, 0,861, +,+, 215853 LINE CR1 585 chr1_NT_456793v1_random 357 855 CR1-X 571 - 357 855 0 2 293,205, 0,293, -,-, 215858 LINE CR1 585 chr1_NT_456800v1_random 1529 3412 LSU-rRNA_Hsa 604 - 1529 3412 0 4 527,74,327,839, 0,581,692,1044, -,-,-,-, 215901 rRNA rRNA 585 chr1_NT_456800v1_random 3521 4502 LSU-rRNA_Hsa 661 - 3521 4502 0 3 93,138,232, 0,513,749, -,-,-, 215903 rRNA rRNA 585 chr1_NT_456804v1_random 232 908 CR1-C2 593 + 232 908 0 2 269,403, 0,273, +,+, 215931 LINE CR1 585 chr1_NT_456804v1_random 1705 2223 GGLTR3G2 317 + 1705 2223 0 2 357,161, 0,357, +,+, 215933 LTR ERVL 585 chr1_NT_456804v1_random 6295 6956 CR1-C 702 + 6295 6956 0 2 213,385, 0,276, +,+, 215935 LINE CR1 585 chr1_NT_456805v1_random 4945 5078 (TTTTC)n 543 + 4945 5078 0 2 45,36, 0,97, +,+, 215943 Simple_repeat Simple_repeat 585 chr1_NT_456806v1_random 5977 7076 CR1-X2 617 - 5977 7076 0 2 276,413, 0,686, -,-, 215949 LINE CR1 585 chr1_NT_456807v1_random 6386 7415 CR1-C4 658 + 6386 7415 0 2 35,987, 0,42, +,+, 215960 LINE CR1 585 chr1_NT_456809v1_random 6253 7604 CR1-B2 640 - 6253 7604 0 2 298,1052, 0,299, -,-, 215973 LINE CR1 585 chr1_NT_456820v1_random 5925 6324 CR1-D2 532 - 5925 6324 0 2 117,159, 0,240, -,-, 216042 LINE CR1 585 chr1_NT_456823v1_random 5947 6243 Mariner1b_GG 658 - 5947 6243 0 2 179,114, 0,182, -,-, 216064 DNA TcMar-Mariner 585 chr1_NT_456830v1_random 5691 6327 CR1-E 352 - 5691 6327 0 2 238,394, 0,242, -,-, 216111 LINE CR1 585 chr1_NT_456831v1_random 2467 3006 GGLTR5B 654 + 2467 3006 0 2 20,473, 0,66, +,+, 216117 LTR ERVL 585 chr1_NT_456835v1_random 4409 5838 CR1-Y2_Aves 87 - 4409 5838 0 2 1092,177, 0,1252, -,-, 216151 LINE CR1 585 chr1_NT_456845v1_random 1109 5323 LSU-rRNA_Hsa 653 - 1109 5323 0 4 1477,107,2209,242, 0,1578,1685,3972, -,-,-,-, 216193 rRNA rRNA 585 chr1_NT_456847v1_random 1699 5859 LSU-rRNA_Hsa 719 + 1699 5859 0 3 2730,85,1124, 0,2750,3036, +,+,+, 216208 rRNA rRNA 585 chr1_NT_456852v1_random 5179 6074 CR1-C3 477 - 5179 6074 0 2 495,400, 0,495, -,-, 216254 LINE CR1 585 chr1_NT_456857v1_random 325 2891 CR1-D2 509 + 325 2891 0 2 335,122, 0,2444, +,+, 216274 LINE CR1 585 chr1_NT_456857v1_random 6808 7526 CR1-Y4 495 + 6808 7526 0 2 341,364, 0,354, +,+, 216281 LINE CR1 585 chr1_NT_456858v1_random 1190 2854 CR1-Y2_Aves 253 - 1190 2854 0 4 63,813,382,89, 0,71,1001,1575, -,-,-,-, 216284 LINE CR1 585 chr1_NT_456866v1_random 5942 5992 (TTTTA)n 360 + 5942 5992 0 2 22,6, 0,44, +,+, 216340 Simple_repeat Simple_repeat 585 chr1_NT_456869v1_random 6606 7275 CR1-L3B_Croc 178 + 6606 7275 0 2 379,198, 0,471, +,+, 216363 LINE CR1 585 chr1_NT_456877v1_random 4177 5840 LSU-rRNA_Hsa 706 - 4177 5840 0 2 1537,103, 0,1560, -,-, 216423 rRNA rRNA 585 chr1_NT_456889v1_random 7054 7305 (CTCTC)n 304 + 7054 7305 0 2 18,203, 0,48, +,+, 216486 Simple_repeat Simple_repeat 585 chr1_NT_456897v1_random 5174 7230 CR1-Y2 776 - 5174 7230 0 2 219,1836, 0,220, -,-, 216526 LINE CR1 585 chr1_NT_456900v1_random 121 2346 CR1-Y2_Aves 77 + 121 2346 0 2 594,1508, 0,717, +,+, 216552 LINE CR1 585 chr1_NT_456909v1_random 442 4705 LSU-rRNA_Hsa 668 + 442 4705 0 5 683,1518,106,1178,72, 0,1160,2697,2895,4191, +,+,+,+,+, 216605 rRNA rRNA 585 chr1_NT_456909v1_random 4936 5076 (T)n 921 + 4936 5076 0 2 20,75, 0,65, +,+, 216609 Simple_repeat Simple_repeat 585 chr1_NT_456913v1_random 775 1035 GGLTR12A 857 + 775 1035 0 3 171,34,55, 0,171,205, +,+,+, 216633 LTR ERVL 585 chr1_NT_456915v1_random 2176 3571 CR1-Y2 502 + 2176 3571 0 2 298,333, 0,1062, +,+, 216649 LINE CR1 585 chr1_NT_456916v1_random 1536 3710 LSU-rRNA_Hsa 630 + 1536 3710 0 4 485,108,1229,210, 0,511,665,1964, +,+,+,+, 216656 rRNA rRNA 585 chr1_NT_456919v1_random 2576 3793 CR1-D2 312 + 2576 3793 0 2 222,194, 0,1023, +,+, 216679 LINE CR1 585 chr1_NT_456922v1_random 4621 6446 CR1-C4 593 - 4621 6446 0 2 1490,335, 0,1490, -,-, 216708 LINE CR1 585 chr1_NT_456924v1_random 4453 6800 CR1-C3 638 - 4453 6800 0 3 428,1314,531, 0,458,1816, -,-,-, 216714 LINE CR1 585 chr1_NT_456933v1_random 827 1654 TguLTR5e 309 + 827 1654 0 2 92,159, 0,668, +,+, 216754 LTR ERVL 585 chr1_NT_456933v1_random 1671 4063 CR1-D 490 + 1671 4063 0 2 1133,977, 0,1415, +,+, 216755 LINE CR1 585 chr1_NT_456935v1_random 2257 4149 Mariner1_GG 607 - 2257 4149 0 2 1049,244, 0,1648, -,-, 216779 DNA TcMar-Mariner 585 chr1_NT_456942v1_random 4076 7014 GGERV30_LTR 694 - 4076 7014 0 2 298,2637, 0,301, -,-, 216829 LTR ERVL 585 chr1_NT_456945v1_random 3335 3743 (ACCCATAGGG)n 553 + 3335 3743 0 2 269,137, 0,271, +,+, 216845 Satellite Satellite 585 chr1_NT_456945v1_random 5079 5439 (CATTC)n 543 + 5079 5439 0 2 185,175, 0,185, +,+, 216848 Satellite Satellite 585 chr1_NT_456945v1_random 6131 6876 (CTCTATGGGG)n 588 + 6131 6876 0 2 246,457, 0,288, +,+, 216853 Satellite Satellite 585 chr1_NT_456946v1_random 3163 6915 GGERVK1-int 970 + 3163 6915 0 2 241,3511, 0,241, +,+, 216857 LTR ERVK 585 chr1_NT_456951v1_random 5540 5987 CR1-11_Crp 196 - 5540 5987 0 2 186,129, 0,318, -,-, 216884 LINE CR1 585 chr1_NT_456957v1_random 2562 3573 CR1-F2 537 + 2562 3573 0 2 492,513, 0,498, +,+, 216905 LINE CR1 585 chr1_NT_456958v1_random 4066 4756 CR1-D2 598 - 4066 4756 0 2 104,586, 0,104, -,-, 216914 LINE CR1 585 chr1_NT_456963v1_random 4205 4742 CR1-F 906 - 4205 4742 0 2 195,342, 0,195, -,-, 216941 LINE CR1 585 chr1_NT_456964v1_random 5247 6918 Charlie12_GG 420 - 5247 6918 0 2 1492,179, 0,1492, -,-, 216949 DNA hAT-Charlie 585 chr1_NT_456966v1_random 2840 3878 CR1-Y2_Aves 282 + 2840 3878 0 2 173,291, 0,747, +,+, 216955 LINE CR1 585 chr1_NT_456968v1_random 4578 6543 CR1-B 909 - 4578 6543 0 2 789,1176, 0,789, -,-, 216973 LINE CR1 585 chr1_NT_456973v1_random 1622 5805 LSU-rRNA_Hsa 633 - 1622 5805 0 3 1123,108,2660, 0,1388,1523, -,-,-, 216992 rRNA rRNA 585 chr1_NT_456978v1_random 5597 6057 UCON29 240 - 5597 6057 0 2 106,104, 0,356, -,-, 217024 DNA Kolobok 585 chr1_NT_456983v1_random 2899 6073 GGERV10_LTR 916 - 2899 6073 0 2 219,2955, 0,219, -,-, 217048 LTR ERVL 585 chr1_NT_456986v1_random 2328 2984 CR1-C4 381 - 2328 2984 0 2 381,103, 0,553, -,-, 217061 LINE CR1 585 chr1_NT_456995v1_random 4390 5816 CR1-Y2_Aves 298 + 4390 5816 0 2 582,302, 0,1124, +,+, 217111 LINE CR1 585 chr1_NT_456998v1_random 6008 6624 Char12Mar1_GG 578 - 6008 6624 0 2 209,370, 0,246, -,-, 217128 DNA hAT-Charlie 585 chr1_NT_457002v1_random 982 1437 CR1-H 475 - 982 1437 0 2 73,81, 0,374, -,-, 217147 LINE CR1 585 chr1_NT_457010v1_random 4631 5597 CR1-E 277 + 4631 5597 0 2 453,213, 0,753, +,+, 217185 LINE CR1 585 chr1_NT_457017v1_random 1483 1664 GGLTR3C1 542 - 1483 1664 0 2 109,72, 0,109, -,-, 217224 LTR ERVL 585 chr1_NT_457021v1_random 497 884 GGLTR3C1 534 - 497 884 0 2 85,271, 0,116, -,-, 217247 LTR ERVL 585 chr1_NT_457021v1_random 3386 5019 CR1-F 359 - 3386 5019 0 4 145,490,387,419, 0,269,759,1214, -,-,-,-, 217251 LINE CR1 585 chr1_NT_457028v1_random 4869 6408 CR1-B2 648 - 4869 6408 0 2 313,1225, 0,314, -,-, 217282 LINE CR1 585 chr1_NT_457029v1_random 476 4767 LSU-rRNA_Hsa 676 + 476 4767 0 3 673,1502,1352, 0,1129,2939, +,+,+, 217286 rRNA rRNA 585 chr1_NT_457029v1_random 5564 5639 (C)n 903 + 5564 5639 0 2 35,22, 0,53, +,+, 217294 Simple_repeat Simple_repeat 585 chr1_NT_457032v1_random 2683 6389 LSU-rRNA_Hsa 626 - 2683 6389 0 4 140,825,1509,399, 0,347,1318,3307, -,-,-,-, 217319 rRNA rRNA 585 chr1_NT_457034v1_random 4283 4513 CR1-X2 668 - 4283 4513 0 2 162,68, 0,162, -,-, 217331 LINE CR1 585 chr1_NT_457035v1_random 1988 2301 GGERVL-B-int 384 + 1988 2301 0 2 157,141, 0,172, +,+, 217336 LTR ERVL 585 chr1_NT_457035v1_random 4076 4781 GGLTR7-int 209 - 4076 4781 0 3 175,180,147, 0,215,558, -,-,-, 217337 LTR ERV1 585 chr1_NT_457035v1_random 6184 6233 (TTCT)n 648 + 6184 6233 0 2 7,8, 0,41, +,+, 217342 Simple_repeat Simple_repeat 585 chr1_NT_457037v1_random 5561 6176 GGLTR8B 485 + 5561 6176 0 3 372,142,88, 0,372,527, +,+,+, 217353 LTR ERVL 585 chr1_NT_457042v1_random 4295 6011 CR1-B2 609 - 4295 6011 0 2 310,1405, 0,311, -,-, 217378 LINE CR1 585 chr1_NT_457051v1_random 4747 5347 CR1-F2 552 + 4747 5347 0 2 302,298, 0,302, +,+, 217422 LINE CR1 585 chr1_NT_457054v1_random 740 855 A-rich 252 + 740 855 0 2 17,45, 0,70, +,+, 217430 Low_complexity Low_complexity 585 chr1_NT_457055v1_random 3958 4428 CR1-Y2_Aves 472 - 3958 4428 0 3 257,102,111, 0,257,359, -,-,-, 217449 LINE CR1 585 chr1_NT_457062v1_random 2287 2683 GGLTR8B 427 - 2287 2683 0 2 282,95, 0,301, -,-, 217480 LTR ERVL 585 chr1_NT_457062v1_random 3013 3811 GGLTR8A 266 + 3013 3811 0 3 415,113,122, 0,523,676, +,+,+, 217481 LTR ERVL 585 chr1_NT_457067v1_random 5583 5954 (GGGAA)n 826 + 5583 5954 0 2 176,183, 0,188, +,+, 217515 Simple_repeat Simple_repeat 585 chr1_NT_457070v1_random 4130 5261 CR1-Y1_Aves 468 - 4130 5261 0 2 101,185, 0,946, -,-, 217531 LINE CR1 585 chr1_NT_457070v1_random 4231 5072 CR1-C4 507 - 4231 5072 0 2 567,270, 0,571, -,-, 217532 LINE CR1 585 chr1_NT_457084v1_random 1515 3736 CR1-F 664 - 1515 3736 0 2 1231,834, 0,1387, -,-, 217587 LINE CR1 585 chr1_NT_457085v1_random 2386 2821 CR1-Y1_Aves 362 + 2386 2821 0 2 345,89, 0,346, +,+, 217596 LINE CR1 585 chr1_NT_457090v1_random 5462 5617 (TA)n 530 + 5462 5617 0 2 59,30, 0,125, +,+, 217632 Simple_repeat Simple_repeat 585 chr1_NT_457091v1_random 3918 5172 CR1-F2 556 - 3918 5172 0 2 1163,45, 0,1209, -,-, 217636 LINE CR1 585 chr1_NT_457092v1_random 2949 5955 CR1-F 886 - 2949 5955 0 2 1209,1527, 0,1479, -,-, 217639 LINE CR1 585 chr1_NT_457098v1_random 4923 5622 Charlie12_GG 546 - 4923 5622 0 2 508,189, 0,510, -,-, 217666 DNA hAT-Charlie 585 chr1_NT_457098v1_random 5578 5895 CR1-Y4 471 + 5578 5895 0 2 229,88, 0,229, +,+, 217667 LINE CR1 585 chr1_NT_457099v1_random 1906 2226 CR1-D2 646 + 1906 2226 0 2 115,121, 0,199, +,+, 217669 LINE CR1 585 chr1_NT_457101v1_random 4573 6039 CR1-C4 559 - 4573 6039 0 2 799,131, 0,1335, -,-, 217685 LINE CR1 585 chr1_NT_457159v1_random 3446 3510 (TTTAT)n 380 + 3446 3510 0 2 17,7, 0,57, +,+, 217914 Simple_repeat Simple_repeat 585 chr1_NT_457163v1_random 1184 2323 CR1-Y4 418 + 1184 2323 0 3 444,370,103, 0,445,1036, +,+,+, 217936 LINE CR1 585 chr1_NT_457172v1_random 882 1771 CR1-X2 481 - 882 1771 0 2 127,213, 0,676, -,-, 218002 LINE CR1 585 chr1_NT_457172v1_random 1904 2238 GGLTR5A 437 - 1904 2238 0 2 155,85, 0,249, -,-, 218003 LTR ERVL 585 chr1_NT_457187v1_random 5219 5453 CR1-C4 567 + 5219 5453 0 2 98,133, 0,101, +,+, 218055 LINE CR1 585 chr1_NT_457192v1_random 986 2149 GGLTR8A 199 - 986 2149 0 2 178,150, 0,1013, -,-, 218065 LTR ERVL 585 chr1_NT_457192v1_random 2767 5454 CR1-X2 477 - 2767 5454 0 3 71,557,364, 0,1176,2323, -,-,-, 218067 LINE CR1 585 chr1_NT_457192v1_random 2838 3939 GGLTR5A 550 - 2838 3939 0 2 116,483, 0,618, -,-, 218068 LTR ERVL 585 chr1_NT_457199v1_random 3463 3997 CR1-E 718 + 3463 3997 0 2 193,336, 0,198, +,+, 218103 LINE CR1 585 chr1_NT_457204v1_random 1511 3492 CR1-D2 657 + 1511 3492 0 3 1044,139,180, 0,1662,1801, +,+,+, 218119 LINE CR1 585 chr1_NT_457206v1_random 1062 2499 CR1-B2 655 - 1062 2499 0 2 316,1120, 0,317, -,-, 218125 LINE CR1 585 chr1_NT_457220v1_random 1268 1771 GGLTR3D 284 + 1268 1771 0 2 347,156, 0,347, +,+, 218189 LTR ERVL 585 chr1_NT_457226v1_random 1390 1818 (GGATG)n 637 + 1390 1818 0 2 182,223, 0,205, +,+, 218228 Simple_repeat Simple_repeat 585 chr1_NT_457244v1_random 597 2296 LSU-rRNA_Hsa 601 - 597 2296 0 2 871,679, 0,1020, -,-, 218294 rRNA rRNA 585 chr1_NT_457251v1_random 3848 4741 CR1-Y1_Aves 219 - 3848 4741 0 2 159,354, 0,539, -,-, 218338 LINE CR1 585 chr1_NT_457256v1_random 842 2118 CR1-F2 471 - 842 2118 0 2 561,659, 0,617, -,-, 218365 LINE CR1 585 chr1_NT_457267v1_random 3220 4137 GGLTR5B 391 + 3220 4137 0 2 256,328, 0,589, +,+, 218420 LTR ERVL 585 chr1_NT_457268v1_random 3954 4504 CR1-Y3 644 - 3954 4504 0 2 39,511, 0,39, -,-, 218424 LINE CR1 585 chr1_NT_457271v1_random 4016 4433 GGLTR8B 351 + 4016 4433 0 2 56,319, 0,98, +,+, 218435 LTR ERVL 585 chr1_NT_457283v1_random 904 3883 GGERVL18-int 634 + 904 3883 0 2 341,2637, 0,342, +,+, 218488 LTR ERVL 585 chr1_NT_457289v1_random 264 4389 LSU-rRNA_Hsa 562 + 264 4389 0 3 2884,974,207, 0,2944,3918, +,+,+, 218518 rRNA rRNA 585 chr1_NT_457299v1_random 1937 2852 CR1-D2 621 - 1937 2852 0 2 621,95, 0,820, -,-, 218552 LINE CR1 585 chr1_NT_457301v1_random 578 3321 LSU-rRNA_Hsa 749 + 578 3321 0 2 1473,1137, 0,1606, +,+, 218558 rRNA rRNA 585 chr1_NT_457302v1_random 2989 3823 CR1-F2 504 + 2989 3823 0 2 501,333, 0,501, +,+, 218567 LINE CR1 585 chr1_NT_457321v1_random 2456 4519 LSU-rRNA_Hsa 750 + 2456 4519 0 2 1225,549, 0,1514, +,+, 218648 rRNA rRNA 585 chr1_NT_457325v1_random 1634 2028 CR1-Y2_Aves 516 - 1634 2028 0 3 148,40,204, 0,149,190, -,-,-, 218672 LINE CR1 585 chr1_NT_457331v1_random 1031 4486 CR1-C4 534 - 1031 4486 0 2 335,496, 0,2959, -,-, 218698 LINE CR1 585 chr1_NT_457331v1_random 2637 3991 CR1-C4 514 + 2637 3991 0 2 784,59, 0,1295, +,+, 218701 LINE CR1 585 chr1_NT_457335v1_random 3782 3965 A-rich 448 + 3782 3965 0 2 32,110, 0,73, +,+, 218719 Low_complexity Low_complexity 585 chr1_NT_457337v1_random 1589 4075 EAVHP_I-int 858 - 1589 4075 0 4 285,1430,168,312, 0,285,2004,2174, -,-,-,-, 218729 LTR ERVK 585 chr1_NT_457342v1_random 2699 3000 CR1-12_AMi 306 + 2699 3000 0 2 180,109, 0,192, +,+, 218745 LINE CR1 585 chr1_NT_457345v1_random 335 4350 LSU-rRNA_Hsa 619 + 335 4350 0 4 671,1481,107,1179, 0,1133,2636,2836, +,+,+,+, 218755 rRNA rRNA 585 chr1_NT_457370v1_random 2717 3120 (TTAGGG)n 633 + 2717 3120 0 2 180,198, 0,205, +,+, 218821 Simple_repeat Simple_repeat 585 chr1_NT_457370v1_random 3201 4123 (TTAGGG)n 723 + 3201 4123 0 3 188,215,306, 0,200,616, +,+,+, 218822 Simple_repeat Simple_repeat 585 chr1_NT_457374v1_random 3072 3606 (GGAA)n 810 + 3072 3606 0 2 338,184, 0,350, +,+, 218835 Simple_repeat Simple_repeat 585 chr1_NT_457375v1_random 820 1325 CR1-Y2_Aves 262 + 820 1325 0 2 294,193, 0,312, +,+, 218841 LINE CR1 585 chr1_NT_457392v1_random 3132 3841 CR1-C3 272 + 3132 3841 0 2 195,469, 0,240, +,+, 218899 LINE CR1 585 chr1_NT_457404v1_random 1040 1247 (TTAGG)n 506 + 1040 1247 0 2 26,7, 0,200, +,+, 218934 Simple_repeat Simple_repeat 585 chr1_NT_457404v1_random 2998 3508 (TTAGGG)n 589 + 2998 3508 0 2 183,308, 0,202, +,+, 218946 Simple_repeat Simple_repeat 585 chr1_NT_457422v1_random 1203 2962 CR1-H2 416 + 1203 2962 0 2 35,103, 0,1656, +,+, 219032 LINE CR1 585 chr1_NT_457443v1_random 380 2057 LSU-rRNA_Hsa 660 - 380 2057 0 2 1513,107, 0,1570, -,-, 219119 rRNA rRNA 585 chr1_NT_457445v1_random 955 1823 CR1-Y2_Aves 114 - 955 1823 0 2 313,478, 0,390, -,-, 219124 LINE CR1 585 chr1_NT_457455v1_random 825 1112 CR1-8_Crp 482 + 825 1112 0 2 152,46, 0,241, +,+, 219164 LINE CR1 585 chr1_NT_457461v1_random 1562 1675 (CTTT)n 240 + 1562 1675 0 2 41,9, 0,104, +,+, 219193 Simple_repeat Simple_repeat 585 chr1_NT_457513v1_random 1152 1638 CR1-F 445 + 1152 1638 0 2 272,214, 0,272, +,+, 219400 LINE CR1 585 chr1_NT_457529v1_random 102 3125 LSU-rRNA_Hsa 701 - 102 3125 0 3 1423,14,1508, 0,1463,1515, -,-,-, 219466 rRNA rRNA 585 chr1_NT_457556v1_random 2216 2932 GGERVL-C-int 716 - 2216 2932 0 2 495,221, 0,495, -,-, 219590 LTR ERVL 585 chr1_NT_457580v1_random 234 725 CR1-E 719 + 234 725 0 2 388,66, 0,425, +,+, 219654 LINE CR1 585 chr1_NT_457630v1_random 361 1892 (TGGA)n 587 + 361 1892 0 4 191,841,187,243, 0,244,1101,1288, +,+,+,+, 219802 Simple_repeat Simple_repeat 585 chr1_NT_457651v1_random 1159 1569 (GGATG)n 615 + 1159 1569 0 2 191,189, 0,221, +,+, 219860 Simple_repeat Simple_repeat 585 chr1_NT_457657v1_random 863 1117 (CTCCT)n 444 + 863 1117 0 2 34,64, 0,190, +,+, 219873 Simple_repeat Simple_repeat 585 chr1_NT_457665v1_random 349 1139 LSU-rRNA_Hsa 560 - 349 1139 0 2 81,696, 0,94, -,-, 219894 rRNA rRNA 585 chr1_NT_457682v1_random 679 1744 CR1-F0 431 + 679 1744 0 4 92,13,100,130, 0,730,812,935, +,+,+,+, 219932 LINE CR1 585 chr1_NT_457688v1_random 221 384 CR1-D2 665 - 221 384 0 3 49,49,38, 0,76,125, -,-,-, 219965 LINE CR1 585 chr1_NT_457688v1_random 1274 1744 CR1-E 703 - 1274 1744 0 11 50,28,49,38,28,48,39,28,47,39,49, 0,50,78,127,165,193,241,280,308,355,421, -,-,-,-,-,-,-,-,-,-,-, 219970 LINE CR1 585 chr1_NT_457697v1_random 610 1242 (TTAGGG)n 585 + 610 1242 0 2 407,213, 0,419, +,+, 219986 Simple_repeat Simple_repeat 585 chr1_NT_457697v1_random 1291 1705 (TTAGGG)n 559 + 1291 1705 0 2 193,203, 0,211, +,+, 219988 Simple_repeat Simple_repeat 585 chr1_NT_457697v1_random 1708 1782 (GGTTA)n 630 + 1708 1782 0 2 13,8, 0,66, +,+, 219989 Simple_repeat Simple_repeat 585 chr1_NT_457699v1_random 368 1424 (TTAGGG)n 639 + 368 1424 0 3 112,192,710, 0,124,346, +,+,+, 219993 Simple_repeat Simple_repeat 585 chr1_NT_457701v1_random 1023 1248 (CCCCATTGGG)n 390 - 1023 1248 0 2 103,105, 0,120, -,-, 219998 Satellite Satellite 585 chr1_NT_457701v1_random 1316 1690 (CCCCATTGGG)n 348 - 1316 1690 0 3 103,106,123, 0,120,251, -,-,-, 219999 Satellite Satellite 585 chr1_NT_457724v1_random 396 789 (TCTCC)n 837 + 396 789 0 2 180,180, 0,213, +,+, 220051 Simple_repeat Simple_repeat 585 chr1_NT_457742v1_random 299 714 (CATCC)n 584 + 299 714 0 2 194,208, 0,207, +,+, 220091 Simple_repeat Simple_repeat 585 chr1_NT_457773v1_random 2162 3067 GGERVL18-int 480 - 2162 3067 0 2 339,565, 0,340, -,-, 220128 LTR ERVL 585 chr1_NT_457824v1_random 599 1303 (CCCCATTGGG)n 533 + 599 1303 0 3 111,301,228, 0,147,476, +,+,+, 220208 Satellite Satellite 585 chr1_NT_457825v1_random 864 1318 (ACCCATAGGG)n 717 - 864 1318 0 2 137,317, 0,137, -,-, 220211 Satellite Satellite 585 chr1_NT_457864v1_random 295 543 CR1-Y4 570 - 295 543 0 2 80,168, 0,80, -,-, 220246 LINE CR1 585 chr2 9738 14644 Z-REP 905 + 9738 14644 0 2 3143,1595, 0,3311, +,+, 220264 Satellite macro 585 chr2 18861 19434 GGLTR11 614 + 18861 19434 0 2 62,473, 0,100, +,+, 220267 LTR ERV1 585 chr2 38352 39988 GGERVL-A-int 763 + 38352 39988 0 2 805,831, 0,805, +,+, 220287 LTR ERVL 585 chr2 39972 41808 GGERVL-C-int 611 + 39972 41808 0 2 1268,568, 0,1268, +,+, 220288 LTR ERVL 585 chr2 42221 43046 CR1-F2 479 - 42221 43046 0 2 335,120, 0,705, -,-, 220290 LINE CR1 585 chr2 44492 46606 CR1-F2 502 - 44492 46606 0 2 622,677, 0,1437, -,-, 220292 LINE CR1 585 chr2 52263 52590 CR1-Y2_Aves 162 + 52263 52590 0 2 167,135, 0,192, +,+, 220301 LINE CR1 585 chr2 70146 71015 CR1-Y2_Aves 101 + 70146 71015 0 2 202,609, 0,260, +,+, 220313 LINE CR1 585 chr2 72502 73183 CR1-11_Crp 194 + 72502 73183 0 2 182,467, 0,214, +,+, 220315 LINE CR1 585 chr2 82773 85126 CR1-C4 569 + 82773 85126 0 2 520,907, 0,1446, +,+, 220320 LINE CR1 585 chr2 111284 112983 CR1-C3 692 - 111284 112983 0 2 395,1304, 0,395, -,-, 220343 LINE CR1 586 chr2 207122 207996 CR1-L3A_Croc 231 - 207122 207996 0 2 273,181, 0,693, -,-, 220391 LINE CR1 586 chr2 226015 226539 CR1-D 758 - 226015 226539 0 2 94,411, 0,113, -,-, 220410 LINE CR1 586 chr2 238269 240714 CR1-Y4 465 - 238269 240714 0 2 237,91, 0,2354, -,-, 220418 LINE CR1 587 chr2 268070 268384 GGLTR8A 438 + 268070 268384 0 2 203,111, 0,203, +,+, 220453 LTR ERVL 587 chr2 269839 269931 CR1-C4 706 + 269839 269931 0 2 47,45, 0,47, +,+, 220455 LINE CR1 587 chr2 307878 308758 (TTGGGG)n 600 + 307878 308758 0 2 691,174, 0,706, +,+, 220502 Simple_repeat Simple_repeat 587 chr2 318267 319049 (ATGGTG)n 411 + 318267 319049 0 3 368,182,186, 0,387,596, +,+,+, 220526 Simple_repeat Simple_repeat 587 chr2 319569 319893 (CTGTG)n 380 + 319569 319893 0 2 115,29, 0,295, +,+, 220527 Simple_repeat Simple_repeat 587 chr2 319879 320254 (CATGC)n 720 + 319879 320254 0 2 160,36, 0,339, +,+, 220529 Simple_repeat Simple_repeat 587 chr2 327739 328144 (AGTTG)n 440 + 327739 328144 0 2 178,193, 0,212, +,+, 220547 Simple_repeat Simple_repeat 587 chr2 354794 355430 GGERVK10-int 388 - 354794 355430 0 3 77,133,94, 0,223,542, -,-,-, 220573 LTR ERVK 587 chr2 361458 362474 CR1-F2 514 + 361458 362474 0 2 169,180, 0,836, +,+, 220578 LINE CR1 587 chr2 365363 365987 GGERV28_I-int 343 + 365363 365987 0 3 94,116,77, 0,285,547, +,+,+, 220582 LTR ERVK 587 chr2 381539 381610 G-rich 346 + 381539 381610 0 2 18,30, 0,41, +,+, 220597 Low_complexity Low_complexity 588 chr2 411441 411861 (GGATG)n 408 + 411441 411861 0 2 190,177, 0,243, +,+, 220620 Simple_repeat Simple_repeat 588 chr2 446510 446959 GGLTR3C1 356 - 446510 446959 0 2 231,82, 0,367, -,-, 220650 LTR ERVL 588 chr2 455932 458360 CR1-H 724 + 455932 458360 0 2 1367,1061, 0,1367, +,+, 220662 LINE CR1 588 chr2 461278 461948 CR1-F2 540 + 461278 461948 0 2 468,202, 0,468, +,+, 220663 LINE CR1 588 chr2 462208 466796 CR1-D2 548 - 462208 466796 0 2 394,1343, 0,3245, -,-, 220665 LINE CR1 589 chr2 550753 551111 (GGATG)n 386 + 550753 551111 0 2 160,187, 0,171, +,+, 220737 Simple_repeat Simple_repeat 589 chr2 551488 551863 (GGATG)n 427 + 551488 551863 0 2 182,179, 0,196, +,+, 220740 Simple_repeat Simple_repeat 589 chr2 611388 614125 CR1-B2 688 + 611388 614125 0 2 111,249, 0,2488, +,+, 220775 LINE CR1 590 chr2 691826 691911 (TTTTGC)n 346 + 691826 691911 0 2 20,18, 0,67, +,+, 220850 Simple_repeat Simple_repeat 590 chr2 692504 693150 CR1-C4 699 + 692504 693150 0 4 48,43,43,66, 0,48,91,580, +,+,+,+, 220853 LINE CR1 590 chr2 692870 692965 CR1-C4 653 + 692870 692965 0 2 52,43, 0,52, +,+, 220859 LINE CR1 590 chr2 693142 693237 CR1-E 713 + 693142 693237 0 2 52,43, 0,52, +,+, 220863 LINE CR1 590 chr2 693312 693510 CR1-B2 696 + 693312 693510 0 2 66,55, 0,143, +,+, 220866 LINE CR1 590 chr2 698015 698125 (CCA)n 922 + 698015 698125 0 2 31,23, 0,87, +,+, 220875 Simple_repeat Simple_repeat 590 chr2 759638 760213 CR1-Y1_Aves 533 - 759638 760213 0 2 64,78, 0,497, -,-, 220927 LINE CR1 591 chr2 838164 838807 CR1-D2 422 - 838164 838807 0 2 130,488, 0,155, -,-, 220986 LINE CR1 591 chr2 885205 890047 CR1-Y4 239 + 885205 890047 0 3 129,314,169, 0,4205,4673, +,+,+, 221031 LINE CR1 591 chr2 893473 894106 CR1-11_Crp 108 - 893473 894106 0 2 242,296, 0,337, -,-, 221039 LINE CR1 592 chr2 942299 942908 CR1-X1 469 + 942299 942908 0 2 297,253, 0,356, +,+, 221067 LINE CR1 592 chr2 947347 947677 GGERV10_LTR 741 - 947347 947677 0 2 160,64, 0,266, -,-, 221072 LTR ERVL 592 chr2 954345 954956 CR1-X1 463 + 954345 954956 0 2 297,255, 0,356, +,+, 221080 LINE CR1 592 chr2 959392 959720 GGERV10_LTR 765 - 959392 959720 0 2 160,64, 0,264, -,-, 221086 LTR ERVL 592 chr2 963331 965476 CR1-X2 435 + 963331 965476 0 2 128,283, 0,1862, +,+, 221091 LINE CR1 592 chr2 968713 969395 CR1-X 255 + 968713 969395 0 2 426,221, 0,461, +,+, 221097 LINE CR1 592 chr2 973702 974384 CR1-X 246 + 973702 974384 0 2 426,221, 0,461, +,+, 221104 LINE CR1 592 chr2 978691 982591 CR1-X2 329 + 978691 982591 0 3 426,221,285, 0,461,3615, +,+,+, 221111 LINE CR1 592 chr2 985828 986510 CR1-X 255 + 985828 986510 0 2 426,221, 0,461, +,+, 221119 LINE CR1 592 chr2 1001666 1001999 CR1-X2 612 + 1001666 1001999 0 2 61,49, 0,284, +,+, 221141 LINE CR1 592 chr2 1012576 1012813 CR1-G 648 - 1012576 1012813 0 2 186,51, 0,186, -,-, 221153 LINE CR1 593 chr2 1160285 1161404 CR1-C3 698 - 1160285 1161404 0 3 512,354,253, 0,512,866, -,-,-, 221259 LINE CR1 594 chr2 1183722 1183989 (CCTT)n 676 + 1183722 1183989 0 2 142,77, 0,190, +,+, 221274 Simple_repeat Simple_repeat 594 chr2 1204059 1204924 CR1-E 508 - 1204059 1204924 0 2 13,630, 0,235, -,-, 221290 LINE CR1 594 chr2 1206784 1211624 CR1-F2 484 + 1206784 1211624 0 2 128,146, 0,4694, +,+, 221292 LINE CR1 594 chr2 1248502 1253346 CR1-F2 437 + 1248502 1253346 0 2 124,147, 0,4697, +,+, 221324 LINE CR1 594 chr2 1294918 1295689 CR1-D2 609 - 1294918 1295689 0 3 169,40,463, 0,268,308, -,-,-, 221367 LINE CR1 594 chr2 1307779 1308238 CR1-Y2_Aves 403 + 1307779 1308238 0 2 84,189, 0,270, +,+, 221375 LINE CR1 595 chr2 1324686 1325538 CR1-C4 586 - 1324686 1325538 0 2 235,617, 0,235, -,-, 221392 LINE CR1 595 chr2 1339790 1340591 CR1-C4 693 + 1339790 1340591 0 2 564,226, 0,575, +,+, 221408 LINE CR1 595 chr2 1344364 1345597 CR1-Y3 605 + 1344364 1345597 0 2 607,624, 0,609, +,+, 221413 LINE CR1 595 chr2 1348752 1349250 CR1-H 777 - 1348752 1349250 0 2 163,335, 0,163, -,-, 221416 LINE CR1 595 chr2 1358979 1359828 CR1-X1 375 - 1358979 1359828 0 2 279,125, 0,724, -,-, 221425 LINE CR1 595 chr2 1360403 1360479 (A)n 860 + 1360403 1360479 0 2 41,18, 0,58, +,+, 221428 Simple_repeat Simple_repeat 595 chr2 1385759 1386305 CR1-B2 96 + 1385759 1386305 0 2 77,199, 0,347, +,+, 221450 LINE CR1 595 chr2 1425891 1426615 CR1-E 807 + 1425891 1426615 0 2 437,283, 0,441, +,+, 221474 LINE CR1 596 chr2 1520035 1520434 CR1-F2 513 - 1520035 1520434 0 2 317,75, 0,324, -,-, 221536 LINE CR1 596 chr2 1533171 1534113 CR1-C4 612 - 1533171 1534113 0 2 62,148, 0,794, -,-, 221544 LINE CR1 596 chr2 1543249 1543329 A-rich 294 + 1543249 1543329 0 2 15,32, 0,48, +,+, 221559 Low_complexity Low_complexity 597 chr2 1649502 1649952 CR1-Y1_Aves 387 + 1649502 1649952 0 2 278,171, 0,279, +,+, 221651 LINE CR1 597 chr2 1680868 1681806 CR1-C4 624 + 1680868 1681806 0 2 661,271, 0,667, +,+, 221674 LINE CR1 598 chr2 1740734 1741687 CR1-F2 340 - 1740734 1741687 0 2 154,227, 0,726, -,-, 221740 LINE CR1 598 chr2 1758199 1759697 CR1-E 437 - 1758199 1759697 0 2 471,734, 0,764, -,-, 221761 LINE CR1 598 chr2 1761993 1762429 CR1-F2 422 + 1761993 1762429 0 2 112,206, 0,230, +,+, 221763 LINE CR1 598 chr2 1767195 1767664 CR1-X2 472 + 1767195 1767664 0 2 356,98, 0,371, +,+, 221768 LINE CR1 598 chr2 1781103 1781189 (T)n 768 + 1781103 1781189 0 2 31,24, 0,62, +,+, 221780 Simple_repeat Simple_repeat 598 chr2 1793314 1794430 CR1-F2 561 + 1793314 1794430 0 2 911,202, 0,914, +,+, 221790 LINE CR1 599 chr2 1892590 1894263 CR1-F2 216 + 1892590 1894263 0 2 188,185, 0,1488, +,+, 221869 LINE CR1 599 chr2 1916821 1919517 CR1-C2 769 - 1916821 1919517 0 2 101,38, 0,2658, -,-, 221883 LINE CR1 600 chr2 2036248 2036586 CR1-Y4 189 - 2036248 2036586 0 2 224,114, 0,224, -,-, 221973 LINE CR1 601 chr2 2126419 2127893 CR1-H2 464 - 2126419 2127893 0 2 82,105, 0,1369, -,-, 222008 LINE CR1 602 chr2 2288767 2293045 CR1-F2 522 - 2288767 2293045 0 2 242,87, 0,4191, -,-, 222088 LINE CR1 602 chr2 2328127 2329361 CR1-C 846 - 2328127 2329361 0 2 43,190, 0,1044, -,-, 222106 LINE CR1 603 chr2 2364157 2364316 CR1-X2 649 + 2364157 2364316 0 2 70,55, 0,104, +,+, 222143 LINE CR1 603 chr2 2378261 2380267 CR1-C 711 + 2378261 2380267 0 2 96,321, 0,1685, +,+, 222155 LINE CR1 603 chr2 2386436 2387011 CR1-H 778 - 2386436 2387011 0 2 164,374, 0,201, -,-, 222159 LINE CR1 603 chr2 2388641 2389186 CR1-D2 523 + 2388641 2389186 0 2 348,170, 0,375, +,+, 222163 LINE CR1 603 chr2 2391116 2391728 CR1-Y4 386 + 2391116 2391728 0 3 239,109,115, 0,277,497, +,+,+, 222164 LINE CR1 603 chr2 2422157 2422568 CR1-F2 609 - 2422157 2422568 0 2 50,66, 0,345, -,-, 222185 LINE CR1 603 chr2 2435089 2439634 CR1-D2 511 + 2435089 2439634 0 2 162,189, 0,4356, +,+, 222203 LINE CR1 603 chr2 2471606 2471842 CR1-Y4 681 - 2471606 2471842 0 2 141,95, 0,141, -,-, 222242 LINE CR1 604 chr2 2544604 2545757 CR1-F2 417 - 2544604 2545757 0 2 95,163, 0,990, -,-, 222296 LINE CR1 605 chr2 2625864 2627292 CR1-D2 555 - 2625864 2627292 0 3 77,81,187, 0,1055,1241, -,-,-, 222375 LINE CR1 605 chr2 2673879 2675821 CR1-H2 469 - 2673879 2675821 0 2 86,66, 0,1876, -,-, 222420 LINE CR1 605 chr2 2696433 2697273 CR1-C4 563 + 2696433 2697273 0 2 407,433, 0,407, +,+, 222442 LINE CR1 606 chr2 2769188 2769949 REP131 259 - 2769188 2769949 0 2 470,64, 0,697, -,-, 222494 DNA? DNA? 606 chr2 2800209 2800504 A-rich 566 + 2800209 2800504 0 2 181,52, 0,243, +,+, 222526 Low_complexity Low_complexity 607 chr2 2979418 2980353 CR1-Y1_Aves 674 - 2979418 2980353 0 2 71,46, 0,889, -,-, 222686 LINE CR1 607 chr2 3002504 3004443 CR1-Y1_Aves 461 + 3002504 3004443 0 2 805,114, 0,1825, +,+, 222702 LINE CR1 608 chr2 3038027 3039102 GGLTR8A 476 - 3038027 3039102 0 3 353,375,93, 0,607,982, -,-,-, 222734 LTR ERVL 608 chr2 3061268 3061681 CR1-C4 646 - 3061268 3061681 0 2 309,104, 0,309, -,-, 222757 LINE CR1 608 chr2 3092815 3093093 CR1-Y2_Aves 513 + 3092815 3093093 0 2 56,177, 0,101, +,+, 222789 LINE CR1 609 chr2 3164708 3165424 CR1-C4 635 + 3164708 3165424 0 2 390,253, 0,463, +,+, 222837 LINE CR1 609 chr2 3184893 3185184 CR1-D2 714 + 3184893 3185184 0 2 52,198, 0,93, +,+, 222856 LINE CR1 609 chr2 3275399 3275753 CR1-D2 719 + 3275399 3275753 0 2 207,147, 0,207, +,+, 222913 LINE CR1 610 chr2 3405797 3406388 CR1-D 405 - 3405797 3406388 0 2 37,554, 0,37, -,-, 223032 LINE CR1 612 chr2 3637957 3639461 CR1-F2 285 + 3637957 3639461 0 2 247,154, 0,1350, +,+, 223250 LINE CR1 612 chr2 3663651 3663933 CR1-D2 645 - 3663651 3663933 0 2 182,100, 0,182, -,-, 223271 LINE CR1 613 chr2 3699065 3699745 CR1-L3A_Croc 244 + 3699065 3699745 0 2 81,114, 0,566, +,+, 223309 LINE CR1 614 chr2 3830861 3831913 Mariner1_GG 656 - 3830861 3831913 0 2 953,99, 0,953, -,-, 223442 DNA TcMar-Mariner 614 chr2 3927813 3930771 CR1-F2 506 + 3927813 3930771 0 3 81,74,70, 0,2803,2888, +,+,+, 223529 LINE CR1 615 chr2 3984561 3984743 CR1-F0 459 - 3984561 3984743 0 2 78,98, 0,84, -,-, 223563 LINE CR1 615 chr2 4000313 4001114 CR1-C4 576 - 4000313 4001114 0 2 129,672, 0,129, -,-, 223571 LINE CR1 616 chr2 4095603 4098066 CR1-C2 524 + 4095603 4098066 0 2 192,99, 0,2364, +,+, 223635 LINE CR1 616 chr2 4113881 4114907 CR1-L3B_Croc 270 + 4113881 4114907 0 3 162,221,220, 0,347,806, +,+,+, 223648 LINE CR1 616 chr2 4142120 4142516 CR1-F2 498 + 4142120 4142516 0 2 117,279, 0,117, +,+, 223674 LINE CR1 616 chr2 4157390 4157651 CR1-D2 598 + 4157390 4157651 0 2 125,136, 0,125, +,+, 223684 LINE CR1 616 chr2 4164297 4164788 Char12Mar1_GG 708 - 4164297 4164788 0 2 136,214, 0,277, -,-, 223689 DNA hAT-Charlie 617 chr2 4227521 4227967 Char12Mar1_GG 727 - 4227521 4227967 0 2 75,371, 0,75, -,-, 223728 DNA hAT-Charlie 617 chr2 4242331 4243952 CR1-D2 666 - 4242331 4243952 0 4 231,59,41,409, 0,796,855,1212, -,-,-,-, 223736 LINE CR1 618 chr2 4344386 4346453 CR1-F2 364 + 4344386 4346453 0 2 160,92, 0,1975, +,+, 223794 LINE CR1 618 chr2 4354311 4355791 CR1-D2 507 + 4354311 4355791 0 2 226,125, 0,1355, +,+, 223805 LINE CR1 618 chr2 4396668 4397010 Char12Mar1_GG 529 - 4396668 4397010 0 2 207,101, 0,241, -,-, 223832 DNA hAT-Charlie 618 chr2 4399955 4400286 CR1-X2 546 + 4399955 4400286 0 2 230,101, 0,230, +,+, 223836 LINE CR1 618 chr2 4429238 4429464 CR1-D2 716 - 4429238 4429464 0 2 191,35, 0,191, -,-, 223865 LINE CR1 619 chr2 4485834 4486496 CR1-C4 542 + 4485834 4486496 0 2 102,560, 0,102, +,+, 223922 LINE CR1 619 chr2 4533255 4534140 CR1-D2 314 - 4533255 4534140 0 2 16,82, 0,803, -,-, 223953 LINE CR1 620 chr2 4697343 4697997 CR1-F2 504 - 4697343 4697997 0 2 424,226, 0,428, -,-, 224042 LINE CR1 621 chr2 4729694 4730185 CR1-C 874 + 4729694 4730185 0 2 192,291, 0,200, +,+, 224057 LINE CR1 621 chr2 4743904 4744570 CR1-F2 303 + 4743904 4744570 0 2 260,402, 0,264, +,+, 224067 LINE CR1 622 chr2 4863312 4863820 CR1-C4 674 + 4863312 4863820 0 2 95,413, 0,95, +,+, 224142 LINE CR1 623 chr2 4980792 4981010 GGLTR8B 654 + 4980792 4981010 0 2 65,149, 0,69, +,+, 224191 LTR ERVL 623 chr2 5011019 5011342 CR1-F2 453 + 5011019 5011342 0 2 203,78, 0,245, +,+, 224204 LINE CR1 623 chr2 5045515 5046892 CR1-F2 315 - 5045515 5046892 0 2 136,171, 0,1206, -,-, 224228 LINE CR1 623 chr2 5103273 5103676 CR1-F2 522 - 5103273 5103676 0 2 102,301, 0,102, -,-, 224283 LINE CR1 624 chr2 5191597 5192227 CR1-C4 616 + 5191597 5192227 0 2 531,99, 0,531, +,+, 224355 LINE CR1 625 chr2 5253996 5254670 CR1-L3A_Croc 204 + 5253996 5254670 0 2 123,232, 0,442, +,+, 224402 LINE CR1 625 chr2 5293856 5297521 CR1-Y1_Aves 308 + 5293856 5297521 0 2 65,503, 0,3162, +,+, 224449 LINE CR1 625 chr2 5342112 5342710 CR1-C4 324 - 5342112 5342710 0 2 217,320, 0,278, -,-, 224477 LINE CR1 625 chr2 5354345 5354959 CR1-Y2_Aves 216 - 5354345 5354959 0 2 150,293, 0,321, -,-, 224489 LINE CR1 626 chr2 5390875 5390977 CR1-X2 465 + 5390875 5390977 0 2 58,44, 0,58, +,+, 224517 LINE CR1 626 chr2 5468362 5469067 CR1-L3A_Croc 191 - 5468362 5469067 0 2 291,172, 0,533, -,-, 224570 LINE CR1 627 chr2 5539838 5540936 Mariner1_GG 684 - 5539838 5540936 0 2 993,105, 0,993, -,-, 224623 DNA TcMar-Mariner 627 chr2 5559151 5559265 (TTGCT)n 518 + 5559151 5559265 0 2 54,20, 0,94, +,+, 224635 Simple_repeat Simple_repeat 627 chr2 5575304 5576318 CR1-11_Crp 251 + 5575304 5576318 0 2 138,194, 0,820, +,+, 224647 LINE CR1 628 chr2 5659861 5659918 (ATATAC)n 452 + 5659861 5659918 0 2 11,18, 0,39, +,+, 224696 Simple_repeat Simple_repeat 628 chr2 5704659 5704925 CR1-D2 705 - 5704659 5704925 0 2 192,58, 0,208, -,-, 224746 LINE CR1 628 chr2 5710010 5710988 CR1-D2 591 - 5710010 5710988 0 2 790,177, 0,801, -,-, 224750 LINE CR1 628 chr2 5726561 5726611 (TTG)n 380 + 5726561 5726611 0 2 21,10, 0,40, +,+, 224768 Simple_repeat Simple_repeat 629 chr2 5888855 5889304 CR1-F2 529 + 5888855 5889304 0 2 133,316, 0,133, +,+, 224909 LINE CR1 630 chr2 5955304 5958191 Gypsy-5_AMi-I 228 - 5955304 5958191 0 2 191,372, 0,2515, -,-, 224962 LTR Gypsy 631 chr2 6052854 6053608 CR1-Y1_Aves 348 - 6052854 6053608 0 2 269,485, 0,269, -,-, 225033 LINE CR1 631 chr2 6085672 6089302 CR1-F2 367 - 6085672 6089302 0 2 232,305, 0,3325, -,-, 225053 LINE CR1 631 chr2 6114661 6117325 CR1-F2 310 + 6114661 6117325 0 2 143,299, 0,2365, +,+, 225081 LINE CR1 631 chr2 6142275 6142764 CR1-F2 625 - 6142275 6142764 0 2 427,58, 0,431, -,-, 225093 LINE CR1 78 chr2 6159634 6161141 Mariner1_GG 586 - 6159634 6161141 0 2 251,81, 0,1426, -,-, 225107 DNA TcMar-Mariner 632 chr2 6166204 6167336 CR1-Y2_Aves 251 + 6166204 6167336 0 2 66,1066, 0,66, +,+, 225113 LINE CR1 633 chr2 6340552 6340772 CR1-C4 428 + 6340552 6340772 0 2 88,132, 0,88, +,+, 225216 LINE CR1 633 chr2 6400059 6400167 CR1-X1 632 - 6400059 6400167 0 2 57,51, 0,57, -,-, 225238 LINE CR1 634 chr2 6442621 6442945 CR1-L3A_Croc 258 - 6442621 6442945 0 2 102,125, 0,199, -,-, 225260 LINE CR1 634 chr2 6490980 6491901 CR1-C4 585 + 6490980 6491901 0 2 338,70, 0,851, +,+, 225285 LINE CR1 634 chr2 6491275 6491815 CR1-Y4 620 + 6491275 6491815 0 2 393,147, 0,393, +,+, 225286 LINE CR1 634 chr2 6534468 6534857 CR1-X 548 - 6534468 6534857 0 2 261,128, 0,261, -,-, 225304 LINE CR1 634 chr2 6543698 6544443 CR1-Y3 592 - 6543698 6544443 0 2 230,515, 0,230, -,-, 225310 LINE CR1 635 chr2 6628788 6629326 CR1-E 528 - 6628788 6629326 0 2 331,199, 0,339, -,-, 225344 LINE CR1 636 chr2 6712697 6713948 CR1-X1 561 + 6712697 6713948 0 2 1055,196, 0,1055, +,+, 225386 LINE CR1 636 chr2 6774056 6774744 CR1-C 774 + 6774056 6774744 0 2 341,347, 0,341, +,+, 225434 LINE CR1 637 chr2 6835423 6836220 CR1-Y4 549 + 6835423 6836220 0 2 207,590, 0,207, +,+, 225474 LINE CR1 637 chr2 6883863 6884555 CR1-L3B_Croc 226 + 6883863 6884555 0 2 159,104, 0,588, +,+, 225494 LINE CR1 638 chr2 6955865 6962048 GGERVK1-int 984 - 6955865 6962048 0 4 241,447,5254,241, 0,241,688,5942, -,-,-,-, 225545 LTR ERVK 638 chr2 7007623 7008191 CR1-F0 448 + 7007623 7008191 0 2 136,171, 0,397, +,+, 225572 LINE CR1 638 chr2 7019609 7020229 CR1-L3A_Croc 310 + 7019609 7020229 0 2 284,208, 0,412, +,+, 225579 LINE CR1 638 chr2 7058323 7058528 GGLTR10C2 889 - 7058323 7058528 0 2 119,85, 0,120, -,-, 225602 LTR ERVK 638 chr2 7060618 7061792 CR1-C4 534 - 7060618 7061792 0 2 440,734, 0,440, -,-, 225605 LINE CR1 641 chr2 7410836 7413902 CR1-H2 328 + 7410836 7413902 0 2 196,557, 0,2509, +,+, 225812 LINE CR1 641 chr2 7434071 7437137 CR1-F0 604 + 7434071 7437137 0 2 263,74, 0,2992, +,+, 225832 LINE CR1 641 chr2 7452554 7452750 GGLTR4A 776 - 7452554 7452750 0 2 71,125, 0,71, -,-, 225849 LTR ERVL 642 chr2 7532842 7534872 CR1-F2 481 + 7532842 7534872 0 2 95,111, 0,1919, +,+, 225902 LINE CR1 643 chr2 7714579 7714954 CR1-C 803 + 7714579 7714954 0 2 222,75, 0,300, +,+, 226020 LINE CR1 644 chr2 7736170 7736710 GGLTR5A 149 + 7736170 7736710 0 2 392,113, 0,427, +,+, 226038 LTR ERVL 644 chr2 7746382 7746538 (CCG)n 356 + 7746382 7746538 0 2 13,63, 0,93, +,+, 226045 Simple_repeat Simple_repeat 644 chr2 7755067 7755578 GGLTR8B 267 + 7755067 7755578 0 2 128,383, 0,128, +,+, 226052 LTR ERVL 644 chr2 7783601 7783784 (TTTTTC)n 416 + 7783601 7783784 0 2 80,7, 0,176, +,+, 226074 Simple_repeat Simple_repeat 644 chr2 7799255 7799892 CR1-F2 489 - 7799255 7799892 0 2 69,216, 0,421, -,-, 226089 LINE CR1 644 chr2 7825421 7825722 CR1-C4 678 + 7825421 7825722 0 2 248,53, 0,248, +,+, 226105 LINE CR1 645 chr2 7964776 7964942 CR1-X2 660 - 7964776 7964942 0 2 82,84, 0,82, -,-, 226250 LINE CR1 645 chr2 7981075 7981496 CR1-Y4 697 - 7981075 7981496 0 2 107,314, 0,107, -,-, 226260 LINE CR1 645 chr2 7991384 7991854 CR1-11_Crp 323 + 7991384 7991854 0 2 82,115, 0,355, +,+, 226264 LINE CR1 646 chr2 8111457 8111564 (T)n 907 + 8111457 8111564 0 2 26,20, 0,87, +,+, 226320 Simple_repeat Simple_repeat 646 chr2 8113241 8114424 CR1-F2 418 - 8113241 8114424 0 2 413,130, 0,1053, -,-, 226325 LINE CR1 647 chr2 8145809 8146554 CR1-Y2_Aves 507 + 8145809 8146554 0 2 206,73, 0,672, +,+, 226358 LINE CR1 647 chr2 8192092 8192777 CR1-F2 631 - 8192092 8192777 0 2 523,148, 0,537, -,-, 226385 LINE CR1 647 chr2 8232938 8233348 Char12Mar1_GG 671 - 8232938 8233348 0 2 293,115, 0,295, -,-, 226414 DNA hAT-Charlie 648 chr2 8382099 8384216 CR1-F2 403 - 8382099 8384216 0 2 188,244, 0,1873, -,-, 226501 LINE CR1 649 chr2 8505475 8506450 CR1-Y2_Aves 337 + 8505475 8506450 0 3 318,273,318, 0,365,657, +,+,+, 226550 LINE CR1 650 chr2 8531669 8532840 CR1-L3B_Croc 167 - 8531669 8532840 0 3 239,185,291, 0,565,880, -,-,-, 226561 LINE CR1 650 chr2 8546550 8547130 CR1-D2 630 + 8546550 8547130 0 2 48,532, 0,48, +,+, 226569 LINE CR1 650 chr2 8547130 8547381 CR1-Y4 522 + 8547130 8547381 0 2 75,162, 0,89, +,+, 226570 LINE CR1 650 chr2 8583803 8585686 CR1-D2 394 - 8583803 8585686 0 2 84,281, 0,1602, -,-, 226597 LINE CR1 650 chr2 8599364 8599746 CR1-F2 487 + 8599364 8599746 0 2 141,93, 0,289, +,+, 226604 LINE CR1 651 chr2 8780194 8780425 CR1-16_AMi 571 - 8780194 8780425 0 2 54,104, 0,127, -,-, 226687 LINE CR1 652 chr2 8814580 8814789 CR1-X2 550 - 8814580 8814789 0 2 110,92, 0,117, -,-, 226712 LINE CR1 653 chr2 8927269 8927347 (T)n 918 + 8927269 8927347 0 2 26,32, 0,46, +,+, 226760 Simple_repeat Simple_repeat 653 chr2 8969416 8969575 CR1-Y4 569 - 8969416 8969575 0 2 42,117, 0,42, -,-, 226784 LINE CR1 653 chr2 8993890 8994266 Char12Mar1_GG 464 - 8993890 8994266 0 2 72,272, 0,104, -,-, 226805 DNA hAT-Charlie 653 chr2 9012307 9012740 REP131 277 - 9012307 9012740 0 2 82,168, 0,265, -,-, 226823 DNA? DNA? 653 chr2 9013299 9014351 Mariner1_GG 565 - 9013299 9014351 0 2 214,838, 0,214, -,-, 226825 DNA TcMar-Mariner 654 chr2 9073267 9074130 CR1-D2 535 + 9073267 9074130 0 2 165,493, 0,370, +,+, 226861 LINE CR1 654 chr2 9133149 9133877 Char12Mar1_GG 640 - 9133149 9133877 0 2 383,173, 0,555, -,-, 226885 DNA hAT-Charlie 654 chr2 9150310 9150389 (ATACAT)n 326 + 9150310 9150389 0 2 15,30, 0,49, +,+, 226901 Simple_repeat Simple_repeat 657 chr2 9466272 9466500 CR1-F2 448 + 9466272 9466500 0 2 150,63, 0,165, +,+, 227059 LINE CR1 657 chr2 9493784 9495068 Char12Mar1_GG 482 - 9493784 9495068 0 2 384,875, 0,409, -,-, 227076 DNA hAT-Charlie 657 chr2 9499504 9500000 TguLTR5e 336 - 9499504 9500000 0 2 201,266, 0,230, -,-, 227079 LTR ERVL 658 chr2 9572271 9572581 CR1-Y3 636 + 9572271 9572581 0 2 153,157, 0,153, +,+, 227124 LINE CR1 658 chr2 9656614 9657056 GGLTR4A 698 + 9656614 9657056 0 2 188,165, 0,277, +,+, 227157 LTR ERVL 658 chr2 9681361 9683171 TguLTR5e 314 - 9681361 9683171 0 2 194,82, 0,1728, -,-, 227166 LTR ERVL 659 chr2 9778894 9779235 CR1-X1 586 + 9778894 9779235 0 2 88,252, 0,89, +,+, 227224 LINE CR1 659 chr2 9821021 9821691 CR1-F0 494 + 9821021 9821691 0 2 207,88, 0,582, +,+, 227250 LINE CR1 660 chr2 9926148 9926762 TguLTR5e 327 - 9926148 9926762 0 2 119,261, 0,353, -,-, 227305 LTR ERVL 661 chr2 9977305 9977831 CR1-F2 497 + 9977305 9977831 0 3 349,77,98, 0,349,428, +,+,+, 227328 LINE CR1 663 chr2 10272294 10274366 CR1-F2 578 + 10272294 10274366 0 2 569,226, 0,1846, +,+, 227454 LINE CR1 663 chr2 10296422 10296725 GGLTR8B 451 - 10296422 10296725 0 2 153,74, 0,229, -,-, 227472 LTR ERVL 663 chr2 10333026 10333636 CR1-X2 561 + 10333026 10333636 0 2 464,113, 0,497, +,+, 227485 LINE CR1 664 chr2 10402159 10402650 GGLTR5A 530 + 10402159 10402650 0 2 422,63, 0,428, +,+, 227518 LTR ERVL 664 chr2 10432106 10432187 (CCGCCGC)n 390 + 10432106 10432187 0 2 7,6, 0,75, +,+, 227536 Simple_repeat Simple_repeat 664 chr2 10450611 10451407 CR1-X2 328 - 10450611 10451407 0 2 507,274, 0,522, -,-, 227546 LINE CR1 664 chr2 10468238 10468350 (T)n 748 + 10468238 10468350 0 2 30,40, 0,72, +,+, 227558 Simple_repeat Simple_repeat 665 chr2 10486445 10486984 GGLTR5B 534 + 10486445 10486984 0 2 456,49, 0,490, +,+, 227565 LTR ERVL 665 chr2 10495559 10496102 GGLTR5B 556 + 10495559 10496102 0 2 458,52, 0,491, +,+, 227570 LTR ERVL 665 chr2 10526850 10527103 CR1-C 852 - 10526850 10527103 0 2 11,206, 0,47, -,-, 227582 LINE CR1 665 chr2 10527671 10528249 CR1-C4 560 + 10527671 10528249 0 2 404,174, 0,404, +,+, 227584 LINE CR1 666 chr2 10622443 10623892 CR1-F 523 + 10622443 10623892 0 2 356,1093, 0,356, +,+, 227625 LINE CR1 666 chr2 10655836 10656114 GGLTR8B 542 + 10655836 10656114 0 2 164,96, 0,182, +,+, 227641 LTR ERVL 667 chr2 10861915 10861965 (AATATT)n 538 + 10861915 10861965 0 2 7,7, 0,43, +,+, 227762 Simple_repeat Simple_repeat 668 chr2 10899473 10899570 (T)n 750 + 10899473 10899570 0 2 37,22, 0,75, +,+, 227785 Simple_repeat Simple_repeat 668 chr2 10914858 10915186 GGERV10_LTR 539 - 10914858 10915186 0 2 165,80, 0,248, -,-, 227803 LTR ERVL 668 chr2 10917562 10919375 CR1-L3A_Croc 192 + 10917562 10919375 0 2 289,321, 0,1492, +,+, 227810 LINE CR1 668 chr2 10919818 10920204 TguLTR5e 269 - 10919818 10920204 0 2 155,214, 0,172, -,-, 227813 LTR ERVL 668 chr2 10920535 10920799 CR1-X1 536 - 10920535 10920799 0 3 114,88,62, 0,114,202, -,-,-, 227814 LINE CR1 668 chr2 11004439 11005135 CR1-X2 513 - 11004439 11005135 0 2 420,102, 0,594, -,-, 227893 LINE CR1 669 chr2 11025769 11026865 GGLTR5A 340 + 11025769 11026865 0 2 388,107, 0,989, +,+, 227913 LTR ERVL 669 chr2 11031819 11032013 CR1-Y2 447 - 11031819 11032013 0 2 99,95, 0,99, -,-, 227917 LINE CR1 669 chr2 11110648 11110935 CR1-C2 307 + 11110648 11110935 0 2 91,114, 0,173, +,+, 227991 LINE CR1 669 chr2 11135115 11135758 CR1-C3 649 - 11135115 11135758 0 2 110,257, 0,386, -,-, 228028 LINE CR1 670 chr2 11205796 11206434 CR1-Y3 677 - 11205796 11206434 0 2 391,247, 0,391, -,-, 228092 LINE CR1 670 chr2 11215268 11215372 CR1-Y 711 + 11215268 11215372 0 2 55,37, 0,67, +,+, 228102 LINE CR1 670 chr2 11248273 11248902 CR1-Y2_Aves 365 - 11248273 11248902 0 2 221,408, 0,221, -,-, 228127 LINE CR1 671 chr2 11274291 11276876 CR1-G 212 - 11274291 11276876 0 2 438,527, 0,2058, -,-, 228149 LINE CR1 671 chr2 11275704 11276049 CR1-F2 304 - 11275704 11276049 0 2 155,138, 0,207, -,-, 228154 LINE CR1 671 chr2 11299044 11299669 CR1-C4 431 + 11299044 11299669 0 2 12,443, 0,182, +,+, 228179 LINE CR1 671 chr2 11363659 11363835 CR1-Y2_Aves 448 + 11363659 11363835 0 2 96,45, 0,131, +,+, 228236 LINE CR1 672 chr2 11481888 11485439 CR1-D 377 + 11481888 11485439 0 3 275,311,51, 0,283,3500, +,+,+, 228305 LINE CR1 672 chr2 11528247 11529092 CR1-Y2_Aves 158 + 11528247 11529092 0 2 388,301, 0,544, +,+, 228339 LINE CR1 672 chr2 11530660 11531227 CR1-Y1_Aves 164 + 11530660 11531227 0 2 221,238, 0,329, +,+, 228341 LINE CR1 673 chr2 11560441 11560760 REP131 394 - 11560441 11560760 0 2 76,224, 0,95, -,-, 228369 DNA? DNA? 673 chr2 11567044 11568034 CR1-Y2_Aves 181 + 11567044 11568034 0 2 481,505, 0,485, +,+, 228375 LINE CR1 673 chr2 11606431 11606972 CR1-G 221 + 11606431 11606972 0 2 337,192, 0,349, +,+, 228411 LINE CR1 673 chr2 11663553 11664157 CR1-L3B_Croc 254 + 11663553 11664157 0 2 22,90, 0,514, +,+, 228461 LINE CR1 674 chr2 11734002 11734091 (AAT)n 410 + 11734002 11734091 0 2 42,13, 0,76, +,+, 228532 Simple_repeat Simple_repeat 674 chr2 11750327 11750836 GGLTR5A 511 - 11750327 11750836 0 2 155,241, 0,268, -,-, 228552 LTR ERVL 674 chr2 11780176 11780834 CR1-L3B_Croc 475 - 11780176 11780834 0 2 88,86, 0,572, -,-, 228573 LINE CR1 84 chr2 11793255 11797918 ENS1-LTR 985 + 11793255 11797918 0 3 913,2837,912, 0,914,3751, +,+,+, 228580 LTR ERVL 675 chr2 11850148 11850264 (T)n 670 + 11850148 11850264 0 2 35,34, 0,82, +,+, 228625 Simple_repeat Simple_repeat 675 chr2 11888334 11890149 CR1-C 835 - 11888334 11890149 0 2 411,1404, 0,411, -,-, 228657 LINE CR1 675 chr2 11909495 11910597 Mariner1_GG 593 - 11909495 11910597 0 2 836,266, 0,836, -,-, 228672 DNA TcMar-Mariner 676 chr2 11939420 11940720 CR1-D 521 - 11939420 11940720 0 2 821,476, 0,824, -,-, 228699 LINE CR1 676 chr2 11946089 11948036 CR1-E 664 - 11946089 11948036 0 2 569,684, 0,1263, -,-, 228705 LINE CR1 676 chr2 11975351 11976300 CR1-C4 396 - 11975351 11976300 0 2 521,388, 0,561, -,-, 228734 LINE CR1 676 chr2 12008486 12008532 (ATTTAT)n 554 + 12008486 12008532 0 2 9,10, 0,36, +,+, 228772 Simple_repeat Simple_repeat 676 chr2 12013981 12014745 CR1-Y2_Aves 205 + 12013981 12014745 0 2 73,649, 0,115, +,+, 228778 LINE CR1 676 chr2 12017543 12017953 Char12Mar1_GG 651 - 12017543 12017953 0 2 321,89, 0,321, -,-, 228780 DNA hAT-Charlie 676 chr2 12037315 12038091 CR1-Y4 591 + 12037315 12038091 0 2 207,188, 0,588, +,+, 228797 LINE CR1 677 chr2 12070968 12072586 CR1-C4 494 - 12070968 12072586 0 3 202,163,282, 0,202,1336, -,-,-, 228822 LINE CR1 677 chr2 12090771 12090881 GGLTR10C1 915 - 12090771 12090881 0 2 78,32, 0,78, -,-, 228837 LTR ERVK 677 chr2 12117811 12117943 A-rich 621 + 12117811 12117943 0 2 50,34, 0,98, +,+, 228859 Low_complexity Low_complexity 677 chr2 12119971 12121045 CR1-C4 449 + 12119971 12121045 0 2 443,483, 0,591, +,+, 228861 LINE CR1 677 chr2 12154465 12156076 CR1-X2 494 + 12154465 12156076 0 2 324,471, 0,1140, +,+, 228891 LINE CR1 677 chr2 12169014 12169380 GGLTR12C 707 + 12169014 12169380 0 2 62,296, 0,70, +,+, 228909 LTR ERVL 678 chr2 12237789 12238722 CR1-F2 62 + 12237789 12238722 0 2 316,267, 0,666, +,+, 228986 LINE CR1 679 chr2 12430464 12431117 CR1-C3 625 + 12430464 12431117 0 2 404,187, 0,466, +,+, 229133 LINE CR1 680 chr2 12513873 12514270 CR1-Y3 726 - 12513873 12514270 0 2 190,206, 0,191, -,-, 229193 LINE CR1 680 chr2 12542625 12543126 GGLTR5A 344 + 12542625 12543126 0 2 269,158, 0,343, +,+, 229208 LTR ERVL 681 chr2 12603692 12604353 CR1-C4 551 + 12603692 12604353 0 2 46,413, 0,248, +,+, 229240 LINE CR1 681 chr2 12637817 12638256 GGLTR4B 577 + 12637817 12638256 0 2 170,58, 0,381, +,+, 229256 LTR ERVL 682 chr2 12785578 12786560 CR1-C 773 + 12785578 12786560 0 2 117,865, 0,117, +,+, 229340 LINE CR1 684 chr2 13097649 13099292 CR1-Y1_Aves 258 - 13097649 13099292 0 2 216,270, 0,1373, -,-, 229477 LINE CR1 685 chr2 13141800 13142324 CR1-X2 562 - 13141800 13142324 0 2 252,272, 0,252, -,-, 229501 LINE CR1 686 chr2 13262176 13263460 CR1-C2 952 - 13262176 13263460 0 2 26,1258, 0,26, -,-, 229560 LINE CR1 686 chr2 13283642 13284271 CR1-F2 654 - 13283642 13284271 0 2 124,481, 0,148, -,-, 229571 LINE CR1 687 chr2 13491834 13491877 (GTTTT)n 578 + 13491834 13491877 0 2 6,9, 0,34, +,+, 229668 Simple_repeat Simple_repeat 689 chr2 13669648 13670694 CR1-G 791 - 13669648 13670694 0 2 469,226, 0,820, -,-, 229768 LINE CR1 689 chr2 13672886 13673966 GGLTR3D 469 + 13672886 13673966 0 2 351,123, 0,957, +,+, 229771 LTR ERVL 689 chr2 13720316 13721490 GGLTR3D 384 + 13720316 13721490 0 2 324,244, 0,930, +,+, 229805 LTR ERVL 690 chr2 13790347 13791090 CR1-L3A_Croc 297 - 13790347 13791090 0 2 390,255, 0,488, -,-, 229845 LINE CR1 692 chr2 14090225 14090663 CR1-C4 666 - 14090225 14090663 0 2 351,86, 0,352, -,-, 229991 LINE CR1 692 chr2 14095610 14096266 REP131 0 - 14095610 14096266 0 2 284,252, 0,404, -,-, 229994 DNA? DNA? 692 chr2 14120044 14121629 CR1-C4 493 - 14120044 14121629 0 3 472,186,837, 0,551,748, -,-,-, 230012 LINE CR1 693 chr2 14231670 14232908 CR1-G 549 + 14231670 14232908 0 2 1061,177, 0,1061, +,+, 230057 LINE CR1 695 chr2 14510836 14511258 (GGAA)n 909 + 14510836 14511258 0 2 180,231, 0,191, +,+, 230173 Simple_repeat Simple_repeat 695 chr2 14518173 14518703 GGLTR3F1 938 - 14518173 14518703 0 2 494,36, 0,494, -,-, 230179 LTR ERVL 695 chr2 14518703 14524512 GGLTR3F1 901 - 14518703 14524512 0 2 5314,494, 0,5315, -,-, 230180 LTR ERVL 696 chr2 14552353 14553110 CR1-8_Crp 222 - 14552353 14553110 0 2 622,116, 0,641, -,-, 230194 LINE CR1 696 chr2 14572508 14573161 CR1-Y2_Aves 155 + 14572508 14573161 0 2 274,92, 0,561, +,+, 230211 LINE CR1 696 chr2 14609034 14609748 CR1-Y2_Aves 247 - 14609034 14609748 0 3 135,176,349, 0,173,365, -,-,-, 230232 LINE CR1 698 chr2 14822368 14822445 (AATTTT)n 346 + 14822368 14822445 0 2 26,27, 0,50, +,+, 230330 Simple_repeat Simple_repeat 698 chr2 14833872 14833937 (TTTCTT)n 506 + 14833872 14833937 0 2 8,36, 0,29, +,+, 230338 Simple_repeat Simple_repeat 699 chr2 14960545 14961043 REP131 206 + 14960545 14961043 0 2 266,207, 0,291, +,+, 230401 DNA? DNA? 699 chr2 14985235 14986011 CR1-Y2_Aves 456 + 14985235 14986011 0 2 66,650, 0,126, +,+, 230418 LINE CR1 699 chr2 14996893 14998833 CR1-X2 239 - 14996893 14998833 0 2 807,1073, 0,867, -,-, 230424 LINE CR1 700 chr2 15170896 15171330 CR1-L3B_Croc 404 - 15170896 15171330 0 2 161,63, 0,371, -,-, 230523 LINE CR1 700 chr2 15180956 15181483 GGLTR5A 370 - 15180956 15181483 0 2 191,289, 0,238, -,-, 230531 LTR ERVL 701 chr2 15231659 15233287 CR1-Y4 330 - 15231659 15233287 0 2 551,336, 0,1292, -,-, 230553 LINE CR1 701 chr2 15287095 15288335 CR1-11_Crp 289 + 15287095 15288335 0 3 514,150,69, 0,551,1171, +,+,+, 230574 LINE CR1 702 chr2 15408555 15410962 CR1-C4 615 + 15408555 15410962 0 2 654,172, 0,2235, +,+, 230631 LINE CR1 702 chr2 15424460 15425306 CR1-F2 861 - 15424460 15425306 0 2 36,735, 0,111, -,-, 230642 LINE CR1 702 chr2 15444989 15445509 CR1-F2 664 + 15444989 15445509 0 2 340,180, 0,340, +,+, 230654 LINE CR1 703 chr2 15568118 15569096 CR1-Y2_Aves 169 - 15568118 15569096 0 2 101,736, 0,242, -,-, 230706 LINE CR1 704 chr2 15620415 15622043 CR1-E 686 - 15620415 15622043 0 3 407,1153,68, 0,407,1560, -,-,-, 230733 LINE CR1 704 chr2 15657358 15657964 CR1-L3A_Croc 333 + 15657358 15657964 0 2 233,92, 0,514, +,+, 230755 LINE CR1 704 chr2 15690412 15690575 G-rich 411 + 15690412 15690575 0 2 74,47, 0,116, +,+, 230772 Low_complexity Low_complexity 705 chr2 15785160 15785708 CR1-Y1_Aves 308 + 15785160 15785708 0 2 267,177, 0,371, +,+, 230818 LINE CR1 705 chr2 15829991 15832631 CR1-F2 495 + 15829991 15832631 0 2 1764,243, 0,2397, +,+, 230840 LINE CR1 705 chr2 15844697 15854193 CR1-C3 551 + 15844697 15854193 0 4 35,223,701,220, 0,7961,8517,9276, +,+,+,+, 230850 LINE CR1 706 chr2 15919004 15919937 CR1-Y4 624 + 15919004 15919937 0 2 896,37, 0,896, +,+, 230900 LINE CR1 706 chr2 15924345 15925918 CR1-D 832 + 15924345 15925918 0 2 1452,121, 0,1452, +,+, 230902 LINE CR1 707 chr2 15998448 15999507 CR1-X2 561 + 15998448 15999507 0 2 164,258, 0,801, +,+, 230924 LINE CR1 707 chr2 16105152 16105699 CR1-Y2_Aves 241 - 16105152 16105699 0 2 208,178, 0,369, -,-, 230976 LINE CR1 708 chr2 16127525 16128051 CR1-Y4 590 - 16127525 16128051 0 2 369,157, 0,369, -,-, 230994 LINE CR1 708 chr2 16134160 16134648 TguLTR5e 368 - 16134160 16134648 0 2 136,182, 0,306, -,-, 230995 LTR ERVL 708 chr2 16185618 16185827 CR1-Y2_Aves 276 - 16185618 16185827 0 2 158,51, 0,158, -,-, 231013 LINE CR1 708 chr2 16185776 16186156 CR1-Y1_Aves 258 - 16185776 16186156 0 2 38,103, 0,277, -,-, 231014 LINE CR1 708 chr2 16246066 16247587 CR1-C2 519 - 16246066 16247587 0 3 69,459,650, 0,412,871, -,-,-, 231047 LINE CR1 710 chr2 16444829 16445931 CR1-E 610 - 16444829 16445931 0 2 440,154, 0,948, -,-, 231135 LINE CR1 710 chr2 16491145 16492313 CR1-Y1_Aves 271 - 16491145 16492313 0 2 223,236, 0,932, -,-, 231158 LINE CR1 711 chr2 16532507 16533185 CR1-C4 754 + 16532507 16533185 0 3 185,235,227, 0,185,451, +,+,+, 231177 LINE CR1 711 chr2 16535460 16536166 CR1-L3B_Croc 225 - 16535460 16536166 0 2 349,256, 0,450, -,-, 231180 LINE CR1 711 chr2 16632197 16632639 Char12Mar1_GG 620 - 16632197 16632639 0 2 369,69, 0,373, -,-, 231217 DNA hAT-Charlie 712 chr2 16756095 16757339 CR1-C4 614 - 16756095 16757339 0 2 598,146, 0,1098, -,-, 231269 LINE CR1 713 chr2 16805083 16805373 CR1-C3 788 + 16805083 16805373 0 2 120,115, 0,175, +,+, 231288 LINE CR1 713 chr2 16838739 16839818 CR1-Y2_Aves 302 - 16838739 16839818 0 2 647,419, 0,660, -,-, 231306 LINE CR1 713 chr2 16844930 16846992 CR1-F2 559 - 16844930 16846992 0 2 605,1457, 0,605, -,-, 231309 LINE CR1 713 chr2 16892773 16893732 CR1-E 292 + 16892773 16893732 0 2 159,798, 0,161, +,+, 231329 LINE CR1 714 chr2 16946959 16948051 CR1-L3B_Croc 175 - 16946959 16948051 0 2 255,174, 0,918, -,-, 231352 LINE CR1 714 chr2 17011755 17013805 L2-3_Crp 177 - 17011755 17013805 0 2 251,174, 0,1876, -,-, 231383 LINE L2 715 chr2 17114883 17116807 CR1-Y4 608 - 17114883 17116807 0 2 163,1585, 0,339, -,-, 231444 LINE CR1 715 chr2 17123568 17124058 CR1-D2 649 - 17123568 17124058 0 2 158,299, 0,191, -,-, 231448 LINE CR1 715 chr2 17168558 17168830 CR1-X2 450 - 17168558 17168830 0 2 181,91, 0,181, -,-, 231476 LINE CR1 716 chr2 17278179 17283282 CR1-F2 593 + 17278179 17283282 0 2 297,82, 0,5021, +,+, 231544 LINE CR1 717 chr2 17366896 17367687 CR1-11_Crp 179 + 17366896 17367687 0 2 457,274, 0,517, +,+, 231592 LINE CR1 718 chr2 17497078 17497802 CR1-Y2_Aves 282 - 17497078 17497802 0 2 569,100, 0,624, -,-, 231664 LINE CR1 719 chr2 17629251 17630269 Mariner1_GG 546 - 17629251 17630269 0 2 843,175, 0,843, -,-, 231711 DNA TcMar-Mariner 719 chr2 17673293 17674935 REP131 62 - 17673293 17674935 0 2 681,666, 0,976, -,-, 231728 DNA? DNA? 720 chr2 17703264 17703329 GA-rich 340 + 17703264 17703329 0 2 26,19, 0,46, +,+, 231749 Low_complexity Low_complexity 720 chr2 17717956 17718514 CR1-L3B_Croc 300 - 17717956 17718514 0 2 77,339, 0,219, -,-, 231753 LINE CR1 720 chr2 17769046 17770836 MER130 197 - 17769046 17770836 0 2 401,163, 0,1627, -,-, 231798 DNA DNA 720 chr2 17817925 17817980 A-rich 416 + 17817925 17817980 0 2 15,16, 0,39, +,+, 231828 Low_complexity Low_complexity 721 chr2 17894502 17894914 CR1-X2 485 + 17894502 17894914 0 2 349,63, 0,349, +,+, 231862 LINE CR1 722 chr2 17984222 17985707 Mariner1_GG 431 - 17984222 17985707 0 2 295,628, 0,857, -,-, 231896 DNA TcMar-Mariner 722 chr2 18060870 18060958 (TG)n 1000 + 18060870 18060958 0 2 28,36, 0,52, +,+, 231940 Simple_repeat Simple_repeat 722 chr2 18061411 18061538 G-rich 514 + 18061411 18061538 0 2 31,85, 0,42, +,+, 231941 Low_complexity Low_complexity 722 chr2 18065331 18065466 (GGA)n 909 + 18065331 18065466 0 2 35,66, 0,69, +,+, 231949 Simple_repeat Simple_repeat 723 chr2 18103681 18104703 CR1-D2 645 - 18103681 18104703 0 2 581,441, 0,581, -,-, 231988 LINE CR1 723 chr2 18180999 18181608 CR1-Y2_Aves 409 - 18180999 18181608 0 2 501,108, 0,501, -,-, 232025 LINE CR1 723 chr2 18217562 18217641 (TCTTCCT)n 426 + 18217562 18217641 0 2 20,16, 0,63, +,+, 232043 Simple_repeat Simple_repeat 725 chr2 18394267 18395263 CR1-C4 557 + 18394267 18395263 0 2 630,366, 0,630, +,+, 232144 LINE CR1 725 chr2 18400032 18401264 CR1-D 809 - 18400032 18401264 0 2 45,1187, 0,45, -,-, 232146 LINE CR1 726 chr2 18500569 18501038 Mariner1_GG 602 - 18500569 18501038 0 3 248,67,67, 0,248,402, -,-,-, 232203 DNA TcMar-Mariner 726 chr2 18515642 18516771 GGLTR9 364 + 18515642 18516771 0 2 126,234, 0,895, +,+, 232207 LTR ERVL 726 chr2 18515766 18516554 CR1-D 706 + 18515766 18516554 0 2 336,452, 0,336, +,+, 232208 LINE CR1 726 chr2 18593498 18595030 CR1-L3B_Croc 111 + 18593498 18595030 0 2 327,726, 0,806, +,+, 232253 LINE CR1 727 chr2 18623576 18624118 GGLTR5A 405 - 18623576 18624118 0 2 112,378, 0,164, -,-, 232264 LTR ERVL 90 chr2 18742598 18743607 CR1-D 667 + 18742598 18743607 0 2 307,702, 0,307, +,+, 232356 LINE CR1 728 chr2 18836378 18836433 A-rich 432 + 18836378 18836433 0 2 17,12, 0,43, +,+, 232428 Low_complexity Low_complexity 728 chr2 18849220 18849586 GGLTR5A 198 + 18849220 18849586 0 2 71,120, 0,246, +,+, 232440 LTR ERVL 728 chr2 18860739 18861620 GGLTR8B 487 - 18860739 18861620 0 2 758,109, 0,772, -,-, 232446 LTR ERVL 729 chr2 18933491 18933558 (AAAAAG)n 754 + 18933491 18933558 0 2 22,9, 0,58, +,+, 232500 Simple_repeat Simple_repeat 729 chr2 18997507 18998163 ENS1-LTR 183 - 18997507 18998163 0 2 299,350, 0,306, -,-, 232552 LTR ERVL 730 chr2 19047504 19048357 CR1-Y3 383 - 19047504 19048357 0 2 189,664, 0,189, -,-, 232582 LINE CR1 731 chr2 19251938 19252968 CR1-Y 769 - 19251938 19252968 0 2 367,611, 0,419, -,-, 232705 LINE CR1 735 chr2 19695253 19695768 CR1-C4 637 + 19695253 19695768 0 2 183,332, 0,183, +,+, 232942 LINE CR1 735 chr2 19786220 19786960 GGERVL-A-int 182 + 19786220 19786960 0 2 287,196, 0,544, +,+, 232988 LTR ERVL 735 chr2 19788881 19789890 CR1-D2 635 - 19788881 19789890 0 2 56,38, 0,971, -,-, 232990 LINE CR1 738 chr2 20073868 20074458 CR1-F2 476 - 20073868 20074458 0 2 425,165, 0,425, -,-, 233118 LINE CR1 738 chr2 20127951 20130605 CR1-F2 605 - 20127951 20130605 0 2 205,79, 0,2575, -,-, 233133 LINE CR1 739 chr2 20200673 20201281 CR1-11_Crp 117 + 20200673 20201281 0 2 389,200, 0,408, +,+, 233174 LINE CR1 739 chr2 20231093 20231406 Char12Mar1_GG 704 - 20231093 20231406 0 2 190,122, 0,191, -,-, 233187 DNA hAT-Charlie 739 chr2 20301827 20302849 CR1-Y2_Aves 194 - 20301827 20302849 0 2 567,384, 0,638, -,-, 233227 LINE CR1 740 chr2 20404881 20405071 GGLTR5A 411 - 20404881 20405071 0 2 17,138, 0,52, -,-, 233281 LTR ERVL 741 chr2 20523798 20523862 A-rich 458 + 20523798 20523862 0 2 11,30, 0,34, +,+, 233331 Low_complexity Low_complexity 741 chr2 20540556 20541085 CR1-11_Crp 237 + 20540556 20541085 0 2 280,84, 0,445, +,+, 233337 LINE CR1 741 chr2 20572550 20573195 CR1-X2 303 - 20572550 20573195 0 2 264,381, 0,264, -,-, 233354 LINE CR1 742 chr2 20624093 20625016 CR1-Y2_Aves 196 - 20624093 20625016 0 2 373,256, 0,667, -,-, 233379 LINE CR1 742 chr2 20630633 20630828 GGLTR8A 764 - 20630633 20630828 0 2 139,40, 0,155, -,-, 233388 LTR ERVL 742 chr2 20660811 20661137 CR1-11_Crp 309 + 20660811 20661137 0 2 142,83, 0,243, +,+, 233402 LINE CR1 742 chr2 20669108 20670707 CR1-X2 500 - 20669108 20670707 0 2 534,1042, 0,557, -,-, 233408 LINE CR1 742 chr2 20675561 20677166 CR1-Y2_Aves 403 + 20675561 20677166 0 3 416,101,462, 0,896,1143, +,+,+, 233411 LINE CR1 743 chr2 20714479 20714929 CR1-C2 798 + 20714479 20714929 0 2 58,387, 0,63, +,+, 233429 LINE CR1 743 chr2 20736425 20737021 GGLTR3A 596 + 20736425 20737021 0 2 440,121, 0,475, +,+, 233445 LTR ERVL 743 chr2 20792979 20793789 CR1-Y2_Aves 123 - 20792979 20793789 0 2 253,138, 0,672, -,-, 233486 LINE CR1 744 chr2 20844364 20844411 (TTTTGTT)n 568 + 20844364 20844411 0 2 6,6, 0,41, +,+, 233516 Simple_repeat Simple_repeat 745 chr2 21029951 21031070 CR1-G 312 - 21029951 21031070 0 2 255,864, 0,255, -,-, 233611 LINE CR1 745 chr2 21043864 21045042 CR1-3_Croc 275 - 21043864 21045042 0 2 76,204, 0,974, -,-, 233614 LINE CR1 745 chr2 21058844 21058909 (TTCTCTT)n 422 + 21058844 21058909 0 2 19,19, 0,46, +,+, 233616 Simple_repeat Simple_repeat 746 chr2 21139526 21139837 CR1-B2 191 - 21139526 21139837 0 2 21,137, 0,174, -,-, 233668 LINE CR1 746 chr2 21163092 21164039 CR1-F2 398 + 21163092 21164039 0 2 143,804, 0,143, +,+, 233685 LINE CR1 747 chr2 21246533 21246893 CR1-F2 690 + 21246533 21246893 0 2 321,39, 0,321, +,+, 233749 LINE CR1 747 chr2 21328125 21328925 CR1-Y2_Aves 407 + 21328125 21328925 0 2 195,255, 0,545, +,+, 233801 LINE CR1 748 chr2 21386502 21389855 GGLTR10B 954 - 21386502 21389855 0 3 382,2585,382, 0,385,2971, -,-,-, 233836 LTR ERVK 748 chr2 21459853 21460655 CR1-L3A_Croc 139 + 21459853 21460655 0 2 167,227, 0,575, +,+, 233882 LINE CR1 749 chr2 21504522 21504827 CR1-Y4 640 - 21504522 21504827 0 2 263,42, 0,263, -,-, 233910 LINE CR1 749 chr2 21526172 21526262 (TTTGTG)n 416 + 21526172 21526262 0 2 23,16, 0,74, +,+, 233930 Simple_repeat Simple_repeat 749 chr2 21553929 21554830 GGLTR8B 465 - 21553929 21554830 0 2 815,86, 0,815, -,-, 233947 LTR ERVL 750 chr2 21637754 21638917 CR1-F 414 - 21637754 21638917 0 2 849,272, 0,891, -,-, 233997 LINE CR1 750 chr2 21664622 21665105 CR1-Y2_Aves 259 + 21664622 21665105 0 2 324,159, 0,324, +,+, 234016 LINE CR1 750 chr2 21708669 21710054 CR1-X1 550 - 21708669 21710054 0 2 822,206, 0,1179, -,-, 234046 LINE CR1 751 chr2 21799136 21799655 TguLTR5e 308 - 21799136 21799655 0 2 206,281, 0,238, -,-, 234088 LTR ERVL 751 chr2 21810994 21811949 TguLTR5e 308 + 21810994 21811949 0 2 290,143, 0,812, +,+, 234096 LTR ERVL 751 chr2 21873463 21875086 CR1-Y1_Aves 405 + 21873463 21875086 0 3 678,622,94, 0,896,1529, +,+,+, 234137 LINE CR1 752 chr2 21916093 21916295 GGLTR3A 905 - 21916093 21916295 0 2 144,51, 0,151, -,-, 234155 LTR ERVL 752 chr2 21981412 21982042 CR1-D 748 + 21981412 21982042 0 2 248,202, 0,428, +,+, 234199 LINE CR1 753 chr2 22028625 22028886 CR1-G 462 - 22028625 22028886 0 2 42,219, 0,42, -,-, 234221 LINE CR1 753 chr2 22108332 22109175 REP131 102 - 22108332 22109175 0 2 423,145, 0,698, -,-, 234267 DNA? DNA? 755 chr2 22296394 22297374 CR1-Y2_Aves 337 - 22296394 22297374 0 2 890,85, 0,895, -,-, 234370 LINE CR1 756 chr2 22417823 22418642 CR1-Y1_Aves 492 + 22417823 22418642 0 2 255,86, 0,733, +,+, 234433 LINE CR1 756 chr2 22433559 22434259 CR1-Y2_Aves 173 + 22433559 22434259 0 2 426,229, 0,471, +,+, 234443 LINE CR1 756 chr2 22489113 22489278 CR1-Y2_Aves 550 - 22489113 22489278 0 2 53,56, 0,109, -,-, 234468 LINE CR1 757 chr2 22609329 22609954 CR1-X1 619 - 22609329 22609954 0 2 293,254, 0,371, -,-, 234516 LINE CR1 758 chr2 22788465 22789726 CR1-E 535 + 22788465 22789726 0 3 462,257,139, 0,476,1122, +,+,+, 234592 LINE CR1 758 chr2 22801980 22802462 CR1-11_Crp 192 - 22801980 22802462 0 2 146,235, 0,247, -,-, 234601 LINE CR1 759 chr2 22877499 22877762 Char12Mar1_GG 514 - 22877499 22877762 0 2 200,63, 0,200, -,-, 234636 DNA hAT-Charlie 759 chr2 22895492 22895995 CR1-F2 603 - 22895492 22895995 0 2 301,168, 0,335, -,-, 234647 LINE CR1 760 chr2 22947290 22947810 GGLTR8B 327 + 22947290 22947810 0 2 231,189, 0,331, +,+, 234678 LTR ERVL 760 chr2 22948454 22950394 Charlie12_GG 572 - 22948454 22950394 0 2 723,1217, 0,723, -,-, 234679 DNA hAT-Charlie 760 chr2 23008588 23008828 CR1-X2 632 - 23008588 23008828 0 2 192,48, 0,192, -,-, 234711 LINE CR1 762 chr2 23200207 23200594 GGLTR5B 750 + 23200207 23200594 0 2 345,42, 0,345, +,+, 234790 LTR ERVL 762 chr2 23212118 23212714 CR1-X2 303 - 23212118 23212714 0 2 170,401, 0,195, -,-, 234802 LINE CR1 762 chr2 23213803 23214122 CR1-F2 598 + 23213803 23214122 0 2 49,270, 0,49, +,+, 234804 LINE CR1 762 chr2 23238564 23238847 REP131 178 + 23238564 23238847 0 2 227,30, 0,253, +,+, 234818 DNA? DNA? 762 chr2 23278902 23279842 CR1-C4 607 - 23278902 23279842 0 2 726,214, 0,726, -,-, 234832 LINE CR1 762 chr2 23310231 23311528 CR1-C4 615 - 23310231 23311528 0 2 290,884, 0,413, -,-, 234846 LINE CR1 762 chr2 23325398 23326119 CR1-C4 639 + 23325398 23326119 0 2 486,235, 0,486, +,+, 234854 LINE CR1 763 chr2 23384076 23384409 GGLTR8A 330 - 23384076 23384409 0 2 137,167, 0,166, -,-, 234893 LTR ERVL 763 chr2 23397993 23399654 CR1-F2 535 + 23397993 23399654 0 3 773,183,705, 0,773,956, +,+,+, 234900 LINE CR1 765 chr2 23700435 23701593 CR1-L3A_Croc 115 + 23700435 23701593 0 2 160,517, 0,641, +,+, 235058 LINE CR1 765 chr2 23719410 23719923 CR1-Y2_Aves 456 - 23719410 23719923 0 2 237,214, 0,299, -,-, 235063 LINE CR1 766 chr2 23756411 23756968 CR1-Y1_Aves 477 + 23756411 23756968 0 2 194,337, 0,220, +,+, 235080 LINE CR1 767 chr2 23920498 23923413 CR1-F2 600 - 23920498 23923413 0 2 111,334, 0,2581, -,-, 235139 LINE CR1 767 chr2 23956994 23958033 CR1-Y1_Aves 264 - 23956994 23958033 0 2 685,317, 0,722, -,-, 235151 LINE CR1 768 chr2 24064681 24065218 REP131 112 - 24064681 24065218 0 2 289,131, 0,406, -,-, 235193 DNA? DNA? 769 chr2 24224725 24224871 A-rich 423 + 24224725 24224871 0 2 67,35, 0,111, +,+, 235261 Low_complexity Low_complexity 770 chr2 24274266 24274417 Char12Mar1_GG 678 - 24274266 24274417 0 2 78,72, 0,79, -,-, 235292 DNA hAT-Charlie 771 chr2 24445341 24445830 CR1-L3B_Croc 263 + 24445341 24445830 0 2 263,190, 0,299, +,+, 235368 LINE CR1 772 chr2 24585061 24586020 CR1-C4 583 + 24585061 24586020 0 2 782,177, 0,782, +,+, 235476 LINE CR1 772 chr2 24638888 24638965 (A)n 742 + 24638888 24638965 0 2 25,26, 0,51, +,+, 235505 Simple_repeat Simple_repeat 96 chr2 24641477 24642032 GGLTR8B 165 - 24641477 24642032 0 2 396,99, 0,456, -,-, 235507 LTR ERVL 773 chr2 24652185 24653927 CR1-F2 478 + 24652185 24653927 0 2 115,48, 0,1694, +,+, 235510 LINE CR1 774 chr2 24858574 24858661 (TTTC)n 610 + 24858574 24858661 0 2 7,12, 0,75, +,+, 235619 Simple_repeat Simple_repeat 774 chr2 24898969 24899494 CR1-C4 616 - 24898969 24899494 0 2 350,175, 0,350, -,-, 235634 LINE CR1 775 chr2 24908743 24908812 (TTCTCT)n 390 + 24908743 24908812 0 2 8,32, 0,37, +,+, 235638 Simple_repeat Simple_repeat 775 chr2 24943118 24944411 CR1-C4 433 - 24943118 24944411 0 2 251,1042, 0,251, -,-, 235650 LINE CR1 775 chr2 24948553 24948799 GGLTR5B 605 + 24948553 24948799 0 2 188,58, 0,188, +,+, 235652 LTR ERVL 775 chr2 24996629 24997851 CR1-L3B_Croc 190 + 24996629 24997851 0 2 680,114, 0,1108, +,+, 235680 LINE CR1 775 chr2 25006567 25007644 CR1-C4 599 + 25006567 25007644 0 3 276,266,522, 0,289,555, +,+,+, 235685 LINE CR1 776 chr2 25051442 25051495 (GAACA)n 410 + 25051442 25051495 0 2 15,7, 0,46, +,+, 235707 Simple_repeat Simple_repeat 777 chr2 25209454 25209550 (T)n 784 + 25209454 25209550 0 2 22,32, 0,64, +,+, 235802 Simple_repeat Simple_repeat 777 chr2 25281099 25283079 CR1-Y4 458 + 25281099 25283079 0 2 1402,578, 0,1402, +,+, 235843 LINE CR1 777 chr2 25295007 25296382 CR1-Y3 595 + 25295007 25296382 0 2 336,72, 0,1303, +,+, 235850 LINE CR1 778 chr2 25305937 25306426 GGLTR8B 223 + 25305937 25306426 0 2 122,245, 0,244, +,+, 235861 LTR ERVL 778 chr2 25318625 25319206 CR1-Y1_Aves 108 - 25318625 25319206 0 2 258,282, 0,299, -,-, 235872 LINE CR1 778 chr2 25365118 25365219 (T)n 905 + 25365118 25365219 0 2 34,35, 0,66, +,+, 235915 Simple_repeat Simple_repeat 778 chr2 25401830 25403388 Charlie12_GG 514 - 25401830 25403388 0 3 1071,153,62, 0,1230,1496, -,-,-, 235946 DNA hAT-Charlie 97 chr2 25426885 25429089 GGLTR3C2 572 + 25426885 25429089 0 2 145,421, 0,1783, +,+, 235965 LTR ERVL 779 chr2 25465424 25466835 CR1-C4 514 - 25465424 25466835 0 2 491,536, 0,875, -,-, 235996 LINE CR1 779 chr2 25535232 25535863 CR1-X2 497 + 25535232 25535863 0 2 462,169, 0,462, +,+, 236058 LINE CR1 780 chr2 25605394 25607687 CR1-E 407 + 25605394 25607687 0 3 850,645,321, 0,850,1972, +,+,+, 236129 LINE CR1 780 chr2 25609007 25609335 GGERV10_LTR 605 - 25609007 25609335 0 2 161,62, 0,266, -,-, 236131 LTR ERVL 780 chr2 25637823 25637880 (CTTTCT)n 548 + 25637823 25637880 0 2 9,8, 0,49, +,+, 236154 Simple_repeat Simple_repeat 781 chr2 25696652 25697934 CR1-F2 532 - 25696652 25697934 0 2 483,650, 0,632, -,-, 236216 LINE CR1 781 chr2 25702426 25703053 CR1-C4 596 + 25702426 25703053 0 2 557,65, 0,562, +,+, 236218 LINE CR1 781 chr2 25704013 25710190 GGERVK1-int 990 - 25704013 25710190 0 4 241,447,5248,241, 0,241,688,5936, -,-,-,-, 236220 LTR ERVK 781 chr2 25714993 25717878 CR1-X2 534 + 25714993 25717878 0 3 353,409,1028, 0,507,1857, +,+,+, 236228 LINE CR1 781 chr2 25748120 25749739 CR1-E 700 + 25748120 25749739 0 2 619,585, 0,1034, +,+, 236258 LINE CR1 781 chr2 25773302 25774245 CR1-C4 545 + 25773302 25774245 0 2 252,39, 0,904, +,+, 236287 LINE CR1 781 chr2 25785543 25786947 CR1-Y3 684 + 25785543 25786947 0 2 689,165, 0,1239, +,+, 236298 LINE CR1 782 chr2 25880807 25881509 Char12Mar1_GG 694 - 25880807 25881509 0 2 436,118, 0,584, -,-, 236388 DNA hAT-Charlie 783 chr2 25999335 25999997 GGLTR8B 231 - 25999335 25999997 0 2 255,267, 0,395, -,-, 236497 LTR ERVL 783 chr2 26014642 26016331 CR1-X2 547 - 26014642 26016331 0 4 105,30,334,1017, 0,259,289,672, -,-,-,-, 236508 LINE CR1 783 chr2 26062041 26062106 A-rich 344 + 26062041 26062106 0 2 28,16, 0,49, +,+, 236538 Low_complexity Low_complexity 783 chr2 26067608 26068800 CR1-D2 593 + 26067608 26068800 0 2 1032,93, 0,1099, +,+, 236542 LINE CR1 784 chr2 26142850 26143211 GGLTR3C1 598 + 26142850 26143211 0 2 317,44, 0,317, +,+, 236589 LTR ERVL 784 chr2 26174404 26175732 CR1-Y2_Aves 150 - 26174404 26175732 0 2 711,110, 0,1218, -,-, 236608 LINE CR1 785 chr2 26303344 26304359 GGLTR4A 679 + 26303344 26304359 0 2 149,204, 0,811, +,+, 236703 LTR ERVL 785 chr2 26336568 26337857 CR1-C3 644 + 26336568 26337857 0 2 883,406, 0,883, +,+, 236720 LINE CR1 786 chr2 26368400 26368948 CR1-Y2_Aves 88 + 26368400 26368948 0 2 273,239, 0,309, +,+, 236750 LINE CR1 786 chr2 26464382 26464484 (T)n 915 + 26464382 26464484 0 2 25,25, 0,77, +,+, 236810 Simple_repeat Simple_repeat 786 chr2 26466660 26466806 (T)n 1000 + 26466660 26466806 0 3 17,27,27, 0,61,119, +,+,+, 236811 Simple_repeat Simple_repeat 787 chr2 26504831 26506004 Mariner1_GG 543 - 26504831 26506004 0 2 670,498, 0,675, -,-, 236832 DNA TcMar-Mariner 787 chr2 26532096 26532164 (TTTG)n 498 + 26532096 26532164 0 2 18,12, 0,56, +,+, 236850 Simple_repeat Simple_repeat 787 chr2 26586702 26588920 CR1-X2 561 + 26586702 26588920 0 2 730,939, 0,1279, +,+, 236883 LINE CR1 788 chr2 26674122 26674565 CR1-D2 672 - 26674122 26674565 0 2 62,379, 0,64, -,-, 236939 LINE CR1 789 chr2 26859057 26859122 (GGTT)n 492 + 26859057 26859122 0 2 21,16, 0,49, +,+, 237036 Simple_repeat Simple_repeat 790 chr2 26876540 26877088 CR1-Y2_Aves 282 - 26876540 26877088 0 2 207,60, 0,488, -,-, 237050 LINE CR1 791 chr2 27004560 27004801 Mariner1_GG 641 - 27004560 27004801 0 2 193,48, 0,193, -,-, 237136 DNA TcMar-Mariner 793 chr2 27295707 27296090 GGLTR5A 482 - 27295707 27296090 0 2 49,266, 0,117, -,-, 237370 LTR ERVL 793 chr2 27305609 27307624 GGLTR5A 574 - 27305609 27307624 0 2 341,239, 0,1776, -,-, 237378 LTR ERVL 793 chr2 27309600 27309927 CR1-X2 444 + 27309600 27309927 0 2 284,43, 0,284, +,+, 237383 LINE CR1 793 chr2 27339539 27340723 CR1-L3B_Croc 195 - 27339539 27340723 0 2 855,329, 0,855, -,-, 237404 LINE CR1 794 chr2 27418276 27419052 CR1-F2 520 - 27418276 27419052 0 2 611,165, 0,611, -,-, 237447 LINE CR1 794 chr2 27510424 27511086 CR1-X2 499 - 27510424 27511086 0 2 156,377, 0,285, -,-, 237513 LINE CR1 795 chr2 27614738 27615681 CR1-F2 402 - 27614738 27615681 0 2 67,375, 0,568, -,-, 237593 LINE CR1 796 chr2 27759072 27759822 CR1-C4 557 + 27759072 27759822 0 2 585,165, 0,585, +,+, 237691 LINE CR1 797 chr2 27790038 27790316 CR1-F2 646 - 27790038 27790316 0 2 118,55, 0,223, -,-, 237718 LINE CR1 797 chr2 27831782 27833264 CR1-X2 122 + 27831782 27833264 0 2 1130,330, 0,1152, +,+, 237745 LINE CR1 797 chr2 27889076 27889230 A-rich 458 + 27889076 27889230 0 2 67,65, 0,89, +,+, 237792 Low_complexity Low_complexity 798 chr2 27931432 27931623 Char12Mar1_GG 556 - 27931432 27931623 0 2 63,128, 0,63, -,-, 237826 DNA hAT-Charlie 799 chr2 28147420 28147528 (GCGGCGG)n 326 + 28147420 28147528 0 2 47,6, 0,102, +,+, 237970 Simple_repeat Simple_repeat 799 chr2 28153791 28154028 UCON28a 387 - 28153791 28154028 0 2 99,74, 0,163, -,-, 237976 Unknown Unknown 799 chr2 28159324 28161267 CR1-L3A_Croc 239 + 28159324 28161267 0 4 378,456,270,313, 0,513,1014,1630, +,+,+,+, 237978 LINE CR1 800 chr2 28181846 28182601 REP131 160 - 28181846 28182601 0 2 148,120, 0,635, -,-, 237995 DNA? DNA? 800 chr2 28234879 28235398 CR1-11_Crp 285 + 28234879 28235398 0 2 183,120, 0,399, +,+, 238038 LINE CR1 800 chr2 28272093 28273065 CR1-C 878 + 28272093 28273065 0 2 488,478, 0,494, +,+, 238067 LINE CR1 800 chr2 28296983 28297793 Char12Mar1_GG 364 + 28296983 28297793 0 2 347,414, 0,396, +,+, 238079 DNA hAT-Charlie 801 chr2 28352162 28353145 Mariner1b_GG 517 - 28352162 28353145 0 2 336,196, 0,787, -,-, 238118 DNA TcMar-Mariner 801 chr2 28370749 28371346 TguLTR5e 268 - 28370749 28371346 0 2 117,362, 0,235, -,-, 238123 LTR ERVL 801 chr2 28382127 28388343 CR1-F 425 - 28382127 28388343 0 4 50,599,206,765, 0,4632,5245,5451, -,-,-,-, 238131 LINE CR1 801 chr2 28399252 28403256 Char12Mar1_GG 569 - 28399252 28403256 0 2 60,62, 0,3942, -,-, 238139 DNA hAT-Charlie 801 chr2 28401109 28401703 CR1-L3A_Croc 120 - 28401109 28401703 0 2 260,283, 0,311, -,-, 238140 LINE CR1 801 chr2 28434881 28436203 CR1-D2 535 - 28434881 28436203 0 2 775,216, 0,1106, -,-, 238160 LINE CR1 802 chr2 28486037 28486901 CR1-C4 601 + 28486037 28486901 0 2 569,295, 0,569, +,+, 238178 LINE CR1 803 chr2 28697599 28702832 CR1-F0 588 + 28697599 28702832 0 2 293,214, 0,5019, +,+, 238284 LINE CR1 804 chr2 28782897 28783460 CR1-C4 645 - 28782897 28783460 0 2 305,258, 0,305, -,-, 238328 LINE CR1 804 chr2 28833507 28834461 CR1-Y2_Aves 218 + 28833507 28834461 0 2 152,779, 0,175, +,+, 238363 LINE CR1 805 chr2 28844531 28845394 Mariner1_GG 551 - 28844531 28845394 0 2 559,304, 0,559, -,-, 238365 DNA TcMar-Mariner 806 chr2 29009246 29009814 CR1-L3A_Croc 364 - 29009246 29009814 0 2 129,173, 0,395, -,-, 238439 LINE CR1 806 chr2 29075238 29075329 A-rich 593 + 29075238 29075329 0 2 35,34, 0,57, +,+, 238478 Low_complexity Low_complexity 807 chr2 29129138 29130497 Mariner1_GG 659 - 29129138 29130497 0 2 977,101, 0,1258, -,-, 238509 DNA TcMar-Mariner 807 chr2 29188127 29193125 CR1-Y2_Aves 278 - 29188127 29193125 0 2 136,612, 0,4386, -,-, 238544 LINE CR1 807 chr2 29202145 29203223 CR1-L3B_Croc 132 + 29202145 29203223 0 2 349,266, 0,812, +,+, 238558 LINE CR1 808 chr2 29237294 29238626 CR1-Y4 279 + 29237294 29238626 0 3 92,1004,213, 0,115,1119, +,+,+, 238581 LINE CR1 810 chr2 29512721 29512785 A-rich 300 + 29512721 29512785 0 2 22,11, 0,53, +,+, 238727 Low_complexity Low_complexity 811 chr2 29639952 29640062 (TTCT)n 328 + 29639952 29640062 0 2 66,6, 0,104, +,+, 238804 Simple_repeat Simple_repeat 811 chr2 29647158 29647282 (GCTCC)n 592 + 29647158 29647282 0 2 51,27, 0,97, +,+, 238816 Simple_repeat Simple_repeat 812 chr2 29795242 29795938 CR1-11_Crp 177 + 29795242 29795938 0 2 478,120, 0,576, +,+, 238921 LINE CR1 812 chr2 29812762 29813141 OldhAT1 96 - 29812762 29813141 0 2 234,81, 0,298, -,-, 238932 DNA hAT-Ac 813 chr2 29898597 29900031 CR1-Y1_Aves 243 + 29898597 29900031 0 2 823,605, 0,829, +,+, 238997 LINE CR1 813 chr2 29926399 29926517 (CAA)n 654 + 29926399 29926517 0 2 19,43, 0,75, +,+, 239015 Simple_repeat Simple_repeat 814 chr2 30033012 30033341 Char12Mar1_GG 751 - 30033012 30033341 0 2 144,145, 0,184, -,-, 239075 DNA hAT-Charlie 814 chr2 30040136 30041507 CR1-Y4 511 + 30040136 30041507 0 2 366,700, 0,671, +,+, 239083 LINE CR1 814 chr2 30053848 30055167 CR1-C4 566 + 30053848 30055167 0 2 222,1095, 0,224, +,+, 239094 LINE CR1 816 chr2 30283741 30284328 (GAAA)n 882 + 30283741 30284328 0 2 179,408, 0,179, +,+, 239233 Simple_repeat Simple_repeat 816 chr2 30292033 30294046 Char12Mar1_GG 535 - 30292033 30294046 0 2 807,575, 0,1438, -,-, 239241 DNA hAT-Charlie 816 chr2 30348565 30348677 A-rich 524 + 30348565 30348677 0 2 39,37, 0,75, +,+, 239272 Low_complexity Low_complexity 816 chr2 30353120 30353693 CR1-11_Crp 239 - 30353120 30353693 0 2 107,342, 0,231, -,-, 239275 LINE CR1 816 chr2 30381560 30381619 (TCTT)n 402 + 30381560 30381619 0 2 19,12, 0,47, +,+, 239289 Simple_repeat Simple_repeat 817 chr2 30418376 30418954 CR1-Y2_Aves 385 - 30418376 30418954 0 2 466,112, 0,466, -,-, 239310 LINE CR1 817 chr2 30439624 30440057 CR1-F2 596 - 30439624 30440057 0 2 234,199, 0,234, -,-, 239324 LINE CR1 818 chr2 30563433 30564074 GGLTR8B 181 - 30563433 30564074 0 3 192,106,155, 0,304,486, -,-,-, 239387 LTR ERVL 818 chr2 30655096 30656846 CR1-X1 584 + 30655096 30656846 0 4 615,467,160,324, 0,799,1266,1426, +,+,+,+, 239430 LINE CR1 820 chr2 30827758 30828433 GGLTR8B 543 - 30827758 30828433 0 2 273,388, 0,287, -,-, 239508 LTR ERVL 820 chr2 30879669 30880479 CR1-Y2_Aves 41 + 30879669 30880479 0 2 263,513, 0,297, +,+, 239533 LINE CR1 820 chr2 30911185 30912309 CR1-Y2_Aves 107 + 30911185 30912309 0 2 121,320, 0,804, +,+, 239548 LINE CR1 822 chr2 31070479 31073669 GGERVL-C-int 690 - 31070479 31073669 0 2 836,767, 0,2423, -,-, 239621 LTR ERVL 822 chr2 31073868 31075695 ENS1-int 523 + 31073868 31075695 0 2 1063,587, 0,1240, +,+, 239624 LTR ERVL 822 chr2 31167676 31167866 (AGG)n 838 + 31167676 31167866 0 3 22,22,22, 0,84,168, +,+,+, 239644 Simple_repeat Simple_repeat 822 chr2 31170174 31170279 (AGG)n 804 + 31170174 31170279 0 2 22,22, 0,83, +,+, 239648 Simple_repeat Simple_repeat 822 chr2 31172674 31172864 (AGG)n 838 + 31172674 31172864 0 3 22,22,22, 0,84,168, +,+,+, 239652 Simple_repeat Simple_repeat 822 chr2 31177272 31177842 GGLTR3D 578 + 31177272 31177842 0 2 438,78, 0,492, +,+, 239654 LTR ERVL 824 chr2 31441135 31441581 CR1-Y3 754 - 31441135 31441581 0 2 314,132, 0,314, -,-, 239770 LINE CR1 825 chr2 31466638 31466884 GGLTR5B 246 - 31466638 31466884 0 2 170,28, 0,218, -,-, 239782 LTR ERVL 826 chr2 31597505 31598549 CR1-Y2_Aves 340 - 31597505 31598549 0 3 763,32,225, 0,764,819, -,-,-, 239840 LINE CR1 826 chr2 31680644 31681350 CR1-Y1_Aves 479 - 31680644 31681350 0 3 365,191,148, 0,367,558, -,-,-, 239872 LINE CR1 826 chr2 31689210 31691290 CR1-F2 519 + 31689210 31691290 0 2 56,91, 0,1989, +,+, 239877 LINE CR1 826 chr2 31691287 31691466 CR1-C4 556 - 31691287 31691466 0 2 151,28, 0,151, -,-, 239881 LINE CR1 827 chr2 31847165 31847764 CR1-Y1_Aves 350 - 31847165 31847764 0 2 377,222, 0,377, -,-, 239941 LINE CR1 829 chr2 32039347 32040217 CR1-Y4 613 + 32039347 32040217 0 2 615,255, 0,615, +,+, 240020 LINE CR1 829 chr2 32111835 32111905 (TTTATTT)n 588 + 32111835 32111905 0 2 31,6, 0,64, +,+, 240052 Simple_repeat Simple_repeat 831 chr2 32310522 32310704 GA-rich 112 + 32310522 32310704 0 2 48,16, 0,166, +,+, 240157 Low_complexity Low_complexity 832 chr2 32411006 32411638 CR1-C3 641 - 32411006 32411638 0 2 336,296, 0,336, -,-, 240204 LINE CR1 833 chr2 32583589 32583920 CR1-F2 524 + 32583589 32583920 0 2 73,145, 0,186, +,+, 240271 LINE CR1 834 chr2 32653338 32653445 GA-rich 130 + 32653338 32653445 0 2 35,39, 0,68, +,+, 240324 Low_complexity Low_complexity 834 chr2 32661288 32661442 G-rich 394 + 32661288 32661442 0 2 43,62, 0,92, +,+, 240335 Low_complexity Low_complexity 835 chr2 32785239 32785852 CR1-L3B_Croc 223 - 32785239 32785852 0 2 448,159, 0,454, -,-, 240504 LINE CR1 835 chr2 32876537 32876859 AmnSINE1 464 - 32876537 32876859 0 2 107,175, 0,147, -,-, 240554 SINE 5S-Deu-L2 836 chr2 32905485 32908093 CR1-C 694 + 32905485 32908093 0 2 59,184, 0,2424, +,+, 240570 LINE CR1 836 chr2 32931218 32932039 GGLTR8B 521 - 32931218 32932039 0 2 672,144, 0,677, -,-, 240579 LTR ERVL 836 chr2 32991119 32991618 CR1-Y1_Aves 487 + 32991119 32991618 0 2 375,63, 0,436, +,+, 240613 LINE CR1 837 chr2 33112751 33113613 CR1-X2 724 + 33112751 33113613 0 2 379,483, 0,379, +,+, 240666 LINE CR1 838 chr2 33185383 33185739 CR1-Y2 721 - 33185383 33185739 0 2 271,41, 0,315, -,-, 240695 LINE CR1 838 chr2 33249955 33250357 CR1-X1 661 - 33249955 33250357 0 2 52,48, 0,354, -,-, 240729 LINE CR1 841 chr2 33607572 33609303 CR1-Y2_Aves 125 - 33607572 33609303 0 2 133,981, 0,750, -,-, 240957 LINE CR1 841 chr2 33630387 33630639 CR1-Y2_Aves 417 - 33630387 33630639 0 2 127,123, 0,129, -,-, 240976 LINE CR1 842 chr2 33737229 33738569 CR1-Y1_Aves 125 - 33737229 33738569 0 3 242,815,148, 0,261,1192, -,-,-, 241029 LINE CR1 842 chr2 33741922 33742459 CR1-C4 695 - 33741922 33742459 0 2 495,42, 0,495, -,-, 241030 LINE CR1 842 chr2 33807653 33808506 REP131 136 - 33807653 33808506 0 2 152,170, 0,683, -,-, 241058 DNA? DNA? 843 chr2 33879487 33880060 CR1-L3A_Croc 384 + 33879487 33880060 0 2 121,77, 0,496, +,+, 241089 LINE CR1 843 chr2 33937080 33938033 CR1-Y1_Aves 420 + 33937080 33938033 0 2 197,321, 0,632, +,+, 241115 LINE CR1 844 chr2 33967457 33967543 (AAAAATA)n 706 + 33967457 33967543 0 2 37,10, 0,76, +,+, 241130 Simple_repeat Simple_repeat 846 chr2 34290756 34290936 GGLTR5B 402 + 34290756 34290936 0 2 107,57, 0,123, +,+, 241274 LTR ERVL 847 chr2 34368236 34368803 CR1-C4 517 - 34368236 34368803 0 2 287,251, 0,316, -,-, 241304 LINE CR1 847 chr2 34371657 34374441 Mariner1_GG 804 - 34371657 34374441 0 2 27,49, 0,2735, -,-, 241306 DNA TcMar-Mariner 848 chr2 34479499 34479611 CR1-D2 794 + 34479499 34479611 0 2 74,38, 0,74, +,+, 241359 LINE CR1 848 chr2 34508287 34508910 GGLTR5B 377 + 34508287 34508910 0 2 410,181, 0,442, +,+, 241375 LTR ERVL 848 chr2 34539790 34540224 CR1-Y1_Aves 493 + 34539790 34540224 0 2 180,79, 0,355, +,+, 241405 LINE CR1 848 chr2 34591404 34591464 (GGCGGCG)n 412 + 34591404 34591464 0 2 21,14, 0,46, +,+, 241430 Simple_repeat Simple_repeat 848 chr2 34591703 34591912 G-rich 439 + 34591703 34591912 0 2 44,106, 0,103, +,+, 241432 Low_complexity Low_complexity 849 chr2 34656981 34657729 CR1-Y2_Aves 301 - 34656981 34657729 0 2 174,572, 0,176, -,-, 241468 LINE CR1 849 chr2 34664336 34664652 GGLTR3B1 696 + 34664336 34664652 0 2 253,62, 0,254, +,+, 241473 LTR ERVL 850 chr2 34782596 34782921 UCON64 349 + 34782596 34782921 0 2 191,125, 0,200, +,+, 241527 Unknown Unknown 850 chr2 34842129 34843415 CR1-D2 513 - 34842129 34843415 0 2 75,1211, 0,75, -,-, 241567 LINE CR1 851 chr2 34990330 34991385 CR1-Y2_Aves 196 + 34990330 34991385 0 2 742,299, 0,756, +,+, 241647 LINE CR1 852 chr2 35022067 35023074 CR1-L3B_Croc 125 + 35022067 35023074 0 2 376,290, 0,717, +,+, 241668 LINE CR1 852 chr2 35057146 35058395 REP131 111 - 35057146 35058395 0 2 568,153, 0,1096, -,-, 241695 DNA? DNA? 853 chr2 35226625 35227588 Charlie12_GG 534 - 35226625 35227588 0 2 204,212, 0,751, -,-, 241803 DNA hAT-Charlie 854 chr2 35263872 35263930 (A)n 947 + 35263872 35263930 0 2 23,20, 0,38, +,+, 241825 Simple_repeat Simple_repeat 854 chr2 35299587 35299904 CR1-L3B_Croc 144 - 35299587 35299904 0 2 200,90, 0,227, -,-, 241843 LINE CR1 854 chr2 35336962 35337029 (GA)n 1000 + 35336962 35337029 0 2 22,16, 0,51, +,+, 241895 Simple_repeat Simple_repeat 854 chr2 35346959 35347207 MER134 461 - 35346959 35347207 0 2 72,97, 0,151, -,-, 241910 DNA? DNA? 854 chr2 35370771 35372406 CR1-F 448 + 35370771 35372406 0 2 343,1292, 0,343, +,+, 241926 LINE CR1 855 chr2 35421182 35421269 (TGTTT)n 366 + 35421182 35421269 0 2 17,35, 0,52, +,+, 241959 Simple_repeat Simple_repeat 855 chr2 35477846 35478000 CR1-C4 433 + 35477846 35478000 0 2 81,73, 0,81, +,+, 242004 LINE CR1 855 chr2 35495959 35496285 Charlie12_GG 401 - 35495959 35496285 0 2 165,62, 0,264, -,-, 242022 DNA hAT-Charlie 856 chr2 35529188 35530419 Mariner1_GG 590 - 35529188 35530419 0 2 392,810, 0,421, -,-, 242058 DNA TcMar-Mariner 856 chr2 35564604 35566190 CR1-F 473 - 35564604 35566190 0 2 1091,495, 0,1091, -,-, 242083 LINE CR1 858 chr2 35791371 35792629 Char12Mar1_GG 462 - 35791371 35792629 0 2 676,582, 0,676, -,-, 242267 DNA hAT-Charlie 858 chr2 35794911 35795255 GGLTR5B 668 - 35794911 35795255 0 2 132,207, 0,137, -,-, 242268 LTR ERVL 858 chr2 35809117 35811009 CR1-C2 648 - 35809117 35811009 0 2 942,949, 0,943, -,-, 242276 LINE CR1 859 chr2 35936517 35937662 CR1-Y4 598 - 35936517 35937662 0 2 498,224, 0,921, -,-, 242303 LINE CR1 859 chr2 36006465 36006841 CR1-Y3 692 + 36006465 36006841 0 2 47,274, 0,102, +,+, 242347 LINE CR1 860 chr2 36078103 36078490 AmnSINE1 399 - 36078103 36078490 0 2 90,64, 0,323, -,-, 242395 SINE 5S-Deu-L2 860 chr2 36112371 36112833 CR1-L3A_Croc 387 - 36112371 36112833 0 2 56,178, 0,284, -,-, 242418 LINE CR1 860 chr2 36121370 36122697 CR1-F0 395 - 36121370 36122697 0 2 287,1040, 0,287, -,-, 242428 LINE CR1 860 chr2 36146626 36146695 (TC)n 272 + 36146626 36146695 0 2 12,12, 0,57, +,+, 242449 Simple_repeat Simple_repeat 861 chr2 36281797 36283070 Mariner1_GG 554 + 36281797 36283070 0 2 726,413, 0,860, +,+, 242533 DNA TcMar-Mariner 862 chr2 36308144 36310089 CR1-D 260 + 36308144 36310089 0 2 163,1369, 0,576, +,+, 242558 LINE CR1 862 chr2 36318446 36319368 CR1-C4 551 + 36318446 36319368 0 2 759,163, 0,759, +,+, 242569 LINE CR1 862 chr2 36323787 36324247 CR1-D2 613 + 36323787 36324247 0 2 203,257, 0,203, +,+, 242574 LINE CR1 862 chr2 36338906 36339477 CR1-Y2_Aves 184 + 36338906 36339477 0 2 283,134, 0,437, +,+, 242590 LINE CR1 862 chr2 36374203 36374910 CR1-Y2_Aves 94 + 36374203 36374910 0 2 483,178, 0,529, +,+, 242616 LINE CR1 862 chr2 36379254 36383903 ENS1-LTR 977 - 36379254 36383903 0 3 913,2821,913, 0,913,3736, -,-,-, 242617 LTR ERVL 863 chr2 36464365 36465003 CR1-F2 418 - 36464365 36465003 0 2 259,377, 0,261, -,-, 242684 LINE CR1 863 chr2 36488436 36489211 REP131 147 - 36488436 36489211 0 2 339,204, 0,571, -,-, 242703 DNA? DNA? 864 chr2 36571183 36571284 (T)n 694 + 36571183 36571284 0 2 24,27, 0,74, +,+, 242774 Simple_repeat Simple_repeat 864 chr2 36587858 36589028 CR1-C4 442 + 36587858 36589028 0 2 561,609, 0,561, +,+, 242789 LINE CR1 865 chr2 36715629 36716159 GGLTR8B 193 + 36715629 36716159 0 2 223,275, 0,255, +,+, 242875 LTR ERVL 865 chr2 36727200 36727748 GGLTR11-int 264 + 36727200 36727748 0 2 110,216, 0,332, +,+, 242881 LTR ERV1 865 chr2 36751922 36752441 Char12Mar1_GG 630 - 36751922 36752441 0 2 188,304, 0,215, -,-, 242906 DNA hAT-Charlie 865 chr2 36786944 36787878 CR1-E 442 - 36786944 36787878 0 2 288,646, 0,288, -,-, 242934 LINE CR1 866 chr2 36867364 36867844 GGLTR5A 222 - 36867364 36867844 0 2 156,265, 0,215, -,-, 242990 LTR ERVL 866 chr2 36926989 36927635 CR1-C4 504 - 36926989 36927635 0 2 265,376, 0,270, -,-, 243009 LINE CR1 867 chr2 37026876 37028721 Charlie12_GG 576 + 37026876 37028721 0 2 1296,520, 0,1325, +,+, 243059 DNA hAT-Charlie 867 chr2 37033373 37034185 CR1-L3A_Croc 159 - 37033373 37034185 0 2 144,265, 0,547, -,-, 243063 LINE CR1 868 chr2 37134837 37138360 UCON84 219 - 37134837 37138360 0 2 91,337, 0,3186, -,-, 243123 Unknown Unknown 868 chr2 37179474 37181696 CR1-D 729 + 37179474 37181696 0 2 456,1465, 0,757, +,+, 243144 LINE CR1 869 chr2 37326925 37327036 (CCCGCGC)n 344 + 37326925 37327036 0 2 33,25, 0,86, +,+, 243225 Simple_repeat Simple_repeat 871 chr2 37502159 37502827 CR1-F2 309 - 37502159 37502827 0 2 13,144, 0,524, -,-, 243312 LINE CR1 871 chr2 37586020 37586425 CR1-H2 334 + 37586020 37586425 0 2 327,12, 0,393, +,+, 243360 LINE CR1 872 chr2 37689684 37691380 CR1-F2 498 + 37689684 37691380 0 2 70,226, 0,1470, +,+, 243401 LINE CR1 874 chr2 38000468 38000947 GGLTR11-int 623 + 38000468 38000947 0 2 210,215, 0,264, +,+, 243548 LTR ERV1 874 chr2 38002624 38002681 (ATATAA)n 420 + 38002624 38002681 0 2 13,16, 0,41, +,+, 243551 Simple_repeat Simple_repeat 875 chr2 38120881 38121398 CR1-Y3 671 + 38120881 38121398 0 2 347,94, 0,423, +,+, 243625 LINE CR1 876 chr2 38172921 38173376 CR1-D2 632 - 38172921 38173376 0 2 120,335, 0,120, -,-, 243656 LINE CR1 876 chr2 38197938 38199256 CR1-D2 670 - 38197938 38199256 0 2 295,1023, 0,295, -,-, 243668 LINE CR1 876 chr2 38254631 38258271 CR1-D2 483 - 38254631 38258271 0 3 1048,2051,184, 0,1397,3456, -,-,-, 243698 LINE CR1 876 chr2 38264092 38266856 CR1-D2 731 + 38264092 38266856 0 2 90,66, 0,2698, +,+, 243705 LINE CR1 877 chr2 38309440 38310560 CR1-L3B_Croc 249 - 38309440 38310560 0 2 60,388, 0,732, -,-, 243732 LINE CR1 877 chr2 38324470 38324518 A-rich 420 + 38324470 38324518 0 2 15,11, 0,37, +,+, 243743 Low_complexity Low_complexity 877 chr2 38341201 38341781 CR1-Y2_Aves 366 - 38341201 38341781 0 3 222,210,92, 0,222,488, -,-,-, 243755 LINE CR1 877 chr2 38383366 38383451 (TTTTA)n 356 + 38383366 38383451 0 2 13,48, 0,37, +,+, 243770 Simple_repeat Simple_repeat 877 chr2 38391052 38391612 CR1-L3B_Croc 184 - 38391052 38391612 0 2 264,207, 0,353, -,-, 243774 LINE CR1 878 chr2 38412210 38413510 CR1-Y4 545 - 38412210 38413510 0 4 206,307,422,311, 0,237,544,989, -,-,-,-, 243783 LINE CR1 878 chr2 38484126 38484914 CR1-C4 616 - 38484126 38484914 0 2 700,88, 0,700, -,-, 243818 LINE CR1 878 chr2 38489776 38490229 GGLTR11-int 423 + 38489776 38490229 0 2 78,131, 0,322, +,+, 243820 LTR ERV1 880 chr2 38793142 38793442 CR1-L3B_Croc 162 - 38793142 38793442 0 2 138,87, 0,213, -,-, 243985 LINE CR1 881 chr2 38808448 38808526 (A)n 1000 + 38808448 38808526 0 2 17,17, 0,61, +,+, 243996 Simple_repeat Simple_repeat 881 chr2 38867476 38868393 CR1-Y2_Aves 140 - 38867476 38868393 0 2 334,164, 0,753, -,-, 244037 LINE CR1 881 chr2 38871927 38872398 CR1-C4 635 + 38871927 38872398 0 2 302,161, 0,310, +,+, 244043 LINE CR1 881 chr2 38900208 38901039 UCON1 185 - 38900208 38901039 0 2 133,195, 0,636, -,-, 244052 Unknown Unknown 882 chr2 38934679 38936179 Charlie7_Aves 513 - 38934679 38936179 0 4 140,800,55,422, 0,140,949,1078, -,-,-,-, 244075 DNA hAT-Charlie 882 chr2 38958955 38959105 CR1-F0 428 + 38958955 38959105 0 2 62,88, 0,62, +,+, 244087 LINE CR1 882 chr2 39015191 39017202 CR1-11_Crp 236 - 39015191 39017202 0 2 276,201, 0,1810, -,-, 244116 LINE CR1 884 chr2 39225946 39225994 (TATTTT)n 576 + 39225946 39225994 0 2 15,7, 0,41, +,+, 244232 Simple_repeat Simple_repeat 884 chr2 39238608 39238917 Char12Mar1_GG 748 - 39238608 39238917 0 2 149,160, 0,149, -,-, 244240 DNA hAT-Charlie 885 chr2 39389993 39390694 CR1-Y2_Aves 128 - 39389993 39390694 0 2 297,254, 0,447, -,-, 244344 LINE CR1 885 chr2 39433406 39434191 CR1-L3A_Croc 229 - 39433406 39434191 0 2 210,163, 0,622, -,-, 244375 LINE CR1 886 chr2 39468556 39469321 CR1-C4 638 + 39468556 39469321 0 2 212,553, 0,212, +,+, 244401 LINE CR1 886 chr2 39480098 39480526 CR1-F2 616 - 39480098 39480526 0 2 242,179, 0,249, -,-, 244407 LINE CR1 886 chr2 39493320 39494422 CR1-F2 528 - 39493320 39494422 0 2 939,163, 0,939, -,-, 244418 LINE CR1 886 chr2 39559735 39559826 (TTTATA)n 434 + 39559735 39559826 0 2 6,10, 0,81, +,+, 244448 Simple_repeat Simple_repeat 886 chr2 39575158 39575244 (T)n 821 + 39575158 39575244 0 2 26,20, 0,66, +,+, 244457 Simple_repeat Simple_repeat 887 chr2 39688226 39689231 CR1-11_Crp 147 - 39688226 39689231 0 2 419,388, 0,617, -,-, 244514 LINE CR1 888 chr2 39763108 39763474 CR1-F2 541 - 39763108 39763474 0 2 325,41, 0,325, -,-, 244546 LINE CR1 888 chr2 39770910 39773077 CR1-D2 572 - 39770910 39773077 0 2 1164,502, 0,1665, -,-, 244551 LINE CR1 888 chr2 39781430 39782124 CR1-C4 582 - 39781430 39782124 0 2 402,292, 0,402, -,-, 244559 LINE CR1 888 chr2 39836358 39836653 Chompy-6_Croc 96 - 39836358 39836653 0 2 156,95, 0,200, -,-, 244593 DNA PIF-Harbinger 890 chr2 40004920 40005573 CR1-L3A_Croc 222 + 40004920 40005573 0 2 378,141, 0,512, +,+, 244688 LINE CR1 890 chr2 40062188 40063273 CR1-D2 510 - 40062188 40063273 0 3 181,512,383, 0,190,702, -,-,-, 244723 LINE CR1 111 chr2 40106898 40108888 CR1-L3B_Croc 217 + 40106898 40108888 0 2 510,573, 0,1417, +,+, 244747 LINE CR1 891 chr2 40215538 40216515 GGLTR8B 399 - 40215538 40216515 0 2 253,580, 0,397, -,-, 244805 LTR ERVL 891 chr2 40217940 40220648 CR1-D 724 + 40217940 40220648 0 2 2206,502, 0,2206, +,+, 244807 LINE CR1 892 chr2 40266879 40267370 GGLTR8B 285 + 40266879 40267370 0 2 138,156, 0,335, +,+, 244839 LTR ERVL 892 chr2 40292633 40292965 CR1-C4 463 - 40292633 40292965 0 2 200,132, 0,200, -,-, 244853 LINE CR1 893 chr2 40372705 40373020 GGLTR11-int 553 + 40372705 40373020 0 2 99,135, 0,180, +,+, 244880 LTR ERV1 893 chr2 40385191 40385609 GGLTR8A 464 + 40385191 40385609 0 2 60,358, 0,60, +,+, 244884 LTR ERVL 893 chr2 40450483 40451708 Char12Mar1_GG 607 - 40450483 40451708 0 3 148,549,380, 0,148,845, -,-,-, 244914 DNA hAT-Charlie 894 chr2 40536895 40537234 CR1-Y2_Aves 206 - 40536895 40537234 0 2 213,83, 0,256, -,-, 244952 LINE CR1 895 chr2 40639191 40639651 CR1-F2 532 + 40639191 40639651 0 2 363,97, 0,363, +,+, 244991 LINE CR1 895 chr2 40696751 40697209 CR1-C4 622 + 40696751 40697209 0 2 106,352, 0,106, +,+, 245016 LINE CR1 895 chr2 40731303 40734290 CR1-Y2_Aves 284 - 40731303 40734290 0 2 96,691, 0,2296, -,-, 245033 LINE CR1 896 chr2 40780851 40782082 CR1-H 723 + 40780851 40782082 0 2 233,998, 0,233, +,+, 245065 LINE CR1 896 chr2 40785344 40786576 CR1-H 743 + 40785344 40786576 0 2 233,999, 0,233, +,+, 245067 LINE CR1 896 chr2 40793452 40794681 CR1-H 741 + 40793452 40794681 0 2 233,996, 0,233, +,+, 245073 LINE CR1 896 chr2 40802955 40804187 CR1-H 743 + 40802955 40804187 0 2 233,999, 0,233, +,+, 245077 LINE CR1 896 chr2 40862894 40866587 CR1-X2 744 - 40862894 40866587 0 3 92,216,105, 0,92,3588, -,-,-, 245103 LINE CR1 898 chr2 41104535 41106235 GGERVL-C-int 509 - 41104535 41106235 0 2 73,1185, 0,515, -,-, 245205 LTR ERVL 898 chr2 41145833 41147228 CR1-C3 702 - 41145833 41147228 0 2 204,1191, 0,204, -,-, 245225 LINE CR1 899 chr2 41254573 41255341 CR1-F2 536 - 41254573 41255341 0 2 191,577, 0,191, -,-, 245262 LINE CR1 899 chr2 41258006 41258120 (TTTTC)n 438 + 41258006 41258120 0 2 39,15, 0,99, +,+, 245265 Simple_repeat Simple_repeat 900 chr2 41311628 41311677 (CACAGCA)n 558 + 41311628 41311677 0 2 12,6, 0,43, +,+, 245297 Simple_repeat Simple_repeat 900 chr2 41347979 41349643 Char12Mar1_GG 627 - 41347979 41349643 0 2 1075,274, 0,1390, -,-, 245324 DNA hAT-Charlie 901 chr2 41518916 41519926 CR1-D2 728 - 41518916 41519926 0 2 496,34, 0,976, -,-, 245410 LINE CR1 901 chr2 41548335 41548411 (GCCCC)n 296 + 41548335 41548411 0 2 8,37, 0,39, +,+, 245423 Simple_repeat Simple_repeat 902 chr2 41560640 41563617 Charlie12_GG 646 - 41560640 41563617 0 2 62,687, 0,2290, -,-, 245435 DNA hAT-Charlie 902 chr2 41562334 41562951 GGERVL18-int 400 + 41562334 41562951 0 2 372,210, 0,407, +,+, 245438 LTR ERVL 903 chr2 41772322 41774433 CR1-C4 581 + 41772322 41774433 0 2 922,1189, 0,922, +,+, 245530 LINE CR1 904 chr2 41875393 41876431 GGERVL-A-int 719 - 41875393 41876431 0 3 113,73,821, 0,113,217, -,-,-, 245591 LTR ERVL 904 chr2 41886105 41886229 CR1-C2 851 - 41886105 41886229 0 2 68,56, 0,68, -,-, 245599 LINE CR1 904 chr2 41927060 41928401 CR1-H 711 - 41927060 41928401 0 2 1043,298, 0,1043, -,-, 245621 LINE CR1 904 chr2 41928420 41929324 CR1-B2 780 + 41928420 41929324 0 2 113,786, 0,118, +,+, 245622 LINE CR1 905 chr2 42037234 42038469 CR1-F2 425 - 42037234 42038469 0 2 587,647, 0,588, -,-, 245674 LINE CR1 906 chr2 42107420 42109176 CR1-F2 846 - 42107420 42109176 0 2 757,997, 0,759, -,-, 245708 LINE CR1 906 chr2 42113881 42116687 CR1-C2 601 - 42113881 42116687 0 2 529,270, 0,2536, -,-, 245712 LINE CR1 907 chr2 42314798 42315436 CR1-Y2_Aves 295 + 42314798 42315436 0 2 266,82, 0,556, +,+, 245823 LINE CR1 909 chr2 42592489 42593612 Mariner1_GG 590 - 42592489 42593612 0 2 686,437, 0,686, -,-, 245938 DNA TcMar-Mariner 113 chr2 42597788 42599745 CR1-X 629 + 42597788 42599745 0 2 173,50, 0,1907, +,+, 245941 LINE CR1 910 chr2 42630913 42631225 CR1-X2 466 - 42630913 42631225 0 2 93,219, 0,93, -,-, 245963 LINE CR1 912 chr2 42878023 42878406 CR1-Y1_Aves 556 + 42878023 42878406 0 2 240,143, 0,240, +,+, 246064 LINE CR1 912 chr2 42935847 42937038 CR1-E 519 - 42935847 42937038 0 2 375,812, 0,379, -,-, 246092 LINE CR1 912 chr2 42978216 42978954 CR1-F2 463 - 42978216 42978954 0 2 217,520, 0,218, -,-, 246105 LINE CR1 914 chr2 43125396 43126146 CR1-D2 633 + 43125396 43126146 0 2 567,183, 0,567, +,+, 246167 LINE CR1 914 chr2 43145559 43148402 CR1-D 561 - 43145559 43148402 0 2 2109,734, 0,2109, -,-, 246181 LINE CR1 916 chr2 43488745 43489189 AmnSINE1 357 + 43488745 43489189 0 2 158,121, 0,323, +,+, 246363 SINE 5S-Deu-L2 917 chr2 43643704 43645000 CR1-C4 609 + 43643704 43645000 0 2 534,762, 0,534, +,+, 246457 LINE CR1 918 chr2 43655669 43657099 CR1-D2 534 + 43655669 43657099 0 2 379,1051, 0,379, +,+, 246465 LINE CR1 918 chr2 43683043 43683980 CR1-D2 657 + 43683043 43683980 0 2 385,542, 0,395, +,+, 246481 LINE CR1 918 chr2 43693669 43695494 Charlie12_GG 519 - 43693669 43695494 0 2 1751,48, 0,1777, -,-, 246486 DNA hAT-Charlie 918 chr2 43735842 43741523 Char12Mar1_GG 674 - 43735842 43741523 0 2 196,187, 0,5494, -,-, 246503 DNA hAT-Charlie 918 chr2 43740854 43741334 CR1-H2 902 - 43740854 43741334 0 2 68,111, 0,369, -,-, 246508 LINE CR1 919 chr2 43858876 43859731 CR1-Y1_Aves 397 - 43858876 43859731 0 2 201,319, 0,536, -,-, 246573 LINE CR1 920 chr2 43927391 43927708 CR1-Y1_Aves 432 - 43927391 43927708 0 2 108,209, 0,108, -,-, 246601 LINE CR1 920 chr2 43933090 43933209 Char12Mar1_GG 622 - 43933090 43933209 0 2 81,38, 0,81, -,-, 246604 DNA hAT-Charlie 920 chr2 44008756 44009536 CR1-H 802 + 44008756 44009536 0 2 691,89, 0,691, +,+, 246639 LINE CR1 920 chr2 44034853 44035050 CR1-Y2_Aves 365 + 44034853 44035050 0 2 62,135, 0,62, +,+, 246650 LINE CR1 921 chr2 44094858 44094915 A-rich 566 + 44094858 44094915 0 2 17,13, 0,44, +,+, 246687 Low_complexity Low_complexity 921 chr2 44141499 44142479 CR1-Y4 355 + 44141499 44142479 0 2 378,279, 0,701, +,+, 246708 LINE CR1 921 chr2 44141870 44142199 GGERV10_LTR 787 + 44141870 44142199 0 2 64,159, 0,170, +,+, 246709 LTR ERVL 922 chr2 44228863 44231063 CR1-Y 455 - 44228863 44231063 0 2 1941,225, 0,1975, -,-, 246742 LINE CR1 923 chr2 44372100 44376018 CR1-E 570 + 44372100 44376018 0 2 205,529, 0,3389, +,+, 246812 LINE CR1 923 chr2 44411766 44411978 Char12Mar1_GG 665 - 44411766 44411978 0 2 37,174, 0,38, -,-, 246835 DNA hAT-Charlie 923 chr2 44420850 44422181 GGERVL-A-int 169 - 44420850 44422181 0 3 280,265,151, 0,518,1180, -,-,-, 246842 LTR ERVL 924 chr2 44492184 44492786 CR1-D2 586 + 44492184 44492786 0 2 533,69, 0,533, +,+, 246884 LINE CR1 925 chr2 44653674 44654339 CR1-X1 673 - 44653674 44654339 0 2 204,147, 0,518, -,-, 246965 LINE CR1 927 chr2 44884122 44885136 CR1-X1 556 - 44884122 44885136 0 2 804,86, 0,928, -,-, 247072 LINE CR1 927 chr2 44914502 44915661 CR1-Y2 720 - 44914502 44915661 0 2 698,330, 0,829, -,-, 247088 LINE CR1 929 chr2 45131384 45132151 GGLTR8B 475 - 45131384 45132151 0 2 118,649, 0,118, -,-, 247172 LTR ERVL 929 chr2 45135576 45136296 CR1-11_Crp 229 - 45135576 45136296 0 2 445,160, 0,560, -,-, 247180 LINE CR1 929 chr2 45138061 45138278 MIR_Aves1 148 - 45138061 45138278 0 2 15,73, 0,144, -,-, 247182 SINE MIR 929 chr2 45148504 45148882 CR1-C4 660 - 45148504 45148882 0 2 263,115, 0,263, -,-, 247187 LINE CR1 930 chr2 45316180 45317199 CR1-Y2_Aves 215 + 45316180 45317199 0 2 730,200, 0,819, +,+, 247256 LINE CR1 930 chr2 45330639 45331123 CR1-B2 442 - 45330639 45331123 0 2 40,444, 0,40, -,-, 247268 LINE CR1 931 chr2 45459683 45460956 CR1-E 484 - 45459683 45460956 0 2 599,674, 0,599, -,-, 247333 LINE CR1 933 chr2 45662690 45663527 CR1-Y4 675 + 45662690 45663527 0 2 197,640, 0,197, +,+, 247428 LINE CR1 933 chr2 45707979 45709638 CR1-X 699 - 45707979 45709638 0 2 364,210, 0,1449, -,-, 247440 LINE CR1 933 chr2 45718301 45720618 Charlie12_GG 595 - 45718301 45720618 0 2 1217,1047, 0,1270, -,-, 247447 DNA hAT-Charlie 933 chr2 45735238 45735461 CR1-C4 666 + 45735238 45735461 0 2 102,121, 0,102, +,+, 247461 LINE CR1 934 chr2 45786108 45790860 Char12Mar1_GG 702 - 45786108 45790860 0 2 38,557, 0,4195, -,-, 247486 DNA hAT-Charlie 934 chr2 45819377 45819745 GGLTR4A 622 + 45819377 45819745 0 2 234,98, 0,270, +,+, 247507 LTR ERVL 935 chr2 45960363 45960813 CR1-X2 594 - 45960363 45960813 0 2 242,198, 0,252, -,-, 247577 LINE CR1 937 chr2 46152523 46155033 GGLTR3A 722 - 46152523 46155033 0 2 1974,536, 0,1974, -,-, 247669 LTR ERVL 937 chr2 46155962 46158025 GGLTR3C2 456 - 46155962 46158025 0 2 1517,544, 0,1519, -,-, 247671 LTR ERVL 937 chr2 46169978 46170393 CR1-Y1_Aves 518 + 46169978 46170393 0 2 306,109, 0,306, +,+, 247679 LINE CR1 938 chr2 46322755 46322809 (AACAA)n 570 + 46322755 46322809 0 2 8,6, 0,48, +,+, 247770 Simple_repeat Simple_repeat 938 chr2 46335344 46337062 CR1-Y4 512 + 46335344 46337062 0 2 1468,244, 0,1474, +,+, 247783 LINE CR1 938 chr2 46370127 46375476 Char12Mar1_GG 665 - 46370127 46375476 0 2 566,37, 0,5312, -,-, 247807 DNA hAT-Charlie 939 chr2 46409745 46410181 CR1-X1 622 - 46409745 46410181 0 2 136,293, 0,143, -,-, 247836 LINE CR1 939 chr2 46431255 46431940 CR1-Y2_Aves 267 - 46431255 46431940 0 2 274,377, 0,308, -,-, 247850 LINE CR1 939 chr2 46495976 46498339 CR1-F2 562 - 46495976 46498339 0 2 1209,1154, 0,1209, -,-, 247875 LINE CR1 940 chr2 46583452 46584046 CR1-F2 231 - 46583452 46584046 0 2 382,212, 0,382, -,-, 247921 LINE CR1 942 chr2 46802677 46802734 (TTTTTG)n 480 + 46802677 46802734 0 2 6,19, 0,38, +,+, 248026 Simple_repeat Simple_repeat 942 chr2 46869905 46871048 CR1-X 430 + 46869905 46871048 0 2 81,1062, 0,81, +,+, 248056 LINE CR1 942 chr2 46877821 46878387 GGLTR5B 266 - 46877821 46878387 0 2 145,325, 0,241, -,-, 248060 LTR ERVL 942 chr2 46895655 46895972 CR1-F0 252 + 46895655 46895972 0 2 177,59, 0,258, +,+, 248069 LINE CR1 944 chr2 47065451 47066314 CR1-F2 382 - 47065451 47066314 0 2 202,97, 0,766, -,-, 248142 LINE CR1 945 chr2 47242270 47244614 GGERVL-C-int 789 - 47242270 47244614 0 3 510,110,1699, 0,510,645, -,-,-, 248216 LTR ERVL 945 chr2 47256655 47257332 CR1-H 855 + 47256655 47257332 0 2 442,235, 0,442, +,+, 248230 LINE CR1 945 chr2 47276062 47277190 CR1-Y4 602 + 47276062 47277190 0 2 459,669, 0,459, +,+, 248241 LINE CR1 946 chr2 47446949 47447025 A-rich 428 + 47446949 47447025 0 2 20,23, 0,53, +,+, 248324 Low_complexity Low_complexity 947 chr2 47472129 47472328 GGLTR8B 531 - 47472129 47472328 0 2 65,134, 0,65, -,-, 248346 LTR ERVL 947 chr2 47529205 47529939 CR1-L3B_Croc 190 - 47529205 47529939 0 2 207,295, 0,439, -,-, 248384 LINE CR1 947 chr2 47551633 47551937 CR1-C3 742 - 47551633 47551937 0 2 69,235, 0,69, -,-, 248395 LINE CR1 948 chr2 47592964 47593277 CR1-X2 547 + 47592964 47593277 0 2 203,110, 0,203, +,+, 248409 LINE CR1 948 chr2 47632542 47633134 CR1-C4 572 - 47632542 47633134 0 2 197,385, 0,207, -,-, 248435 LINE CR1 948 chr2 47667237 47668246 Char12Mar1_GG 523 - 47667237 47668246 0 2 802,207, 0,802, -,-, 248448 DNA hAT-Charlie 949 chr2 47736687 47737469 CR1-X1 628 - 47736687 47737469 0 2 64,717, 0,65, -,-, 248490 LINE CR1 949 chr2 47740359 47741173 CR1-Y4 673 - 47740359 47741173 0 2 396,418, 0,396, -,-, 248491 LINE CR1 949 chr2 47783968 47784742 CR1-Y2_Aves 136 - 47783968 47784742 0 2 424,203, 0,571, -,-, 248505 LINE CR1 950 chr2 47874727 47874977 AmnSINE1 544 + 47874727 47874977 0 2 132,66, 0,184, +,+, 248551 SINE 5S-Deu-L2 950 chr2 47896873 47896938 GA-rich 520 + 47896873 47896938 0 2 37,11, 0,54, +,+, 248558 Low_complexity Low_complexity 950 chr2 47909027 47909520 CR1-C4 581 + 47909027 47909520 0 2 290,203, 0,290, +,+, 248568 LINE CR1 950 chr2 47922405 47924396 CR1-Y 629 + 47922405 47924396 0 2 242,1749, 0,242, +,+, 248576 LINE CR1 950 chr2 47954459 47956080 CR1-F2 521 + 47954459 47956080 0 3 258,839,524, 0,258,1097, +,+,+, 248593 LINE CR1 951 chr2 47986191 47986261 (TTTATTT)n 388 + 47986191 47986261 0 2 41,6, 0,64, +,+, 248609 Simple_repeat Simple_repeat 951 chr2 47997106 47998058 CR1-C4 448 + 47997106 47998058 0 2 276,201, 0,751, +,+, 248620 LINE CR1 952 chr2 48108962 48110100 CR1-Y2_Aves 174 - 48108962 48110100 0 2 613,122, 0,1016, -,-, 248678 LINE CR1 952 chr2 48112623 48114389 Mariner1_GG 580 - 48112623 48114389 0 2 358,901, 0,865, -,-, 248680 DNA TcMar-Mariner 953 chr2 48288127 48288793 CR1-E 376 - 48288127 48288793 0 2 183,155, 0,511, -,-, 248770 LINE CR1 953 chr2 48314672 48315564 Char12Mar1_GG 412 - 48314672 48315564 0 2 96,768, 0,124, -,-, 248785 DNA hAT-Charlie 954 chr2 48368835 48370547 CR1-F2 776 + 48368835 48370547 0 2 777,98, 0,1614, +,+, 248816 LINE CR1 954 chr2 48374680 48375977 CR1-Y1_Aves 418 - 48374680 48375977 0 2 363,162, 0,1135, -,-, 248820 LINE CR1 954 chr2 48388138 48388822 CR1-11_Crp 248 + 48388138 48388822 0 2 252,113, 0,571, +,+, 248824 LINE CR1 954 chr2 48393727 48396603 CR1-X1 480 + 48393727 48396603 0 2 576,412, 0,2464, +,+, 248828 LINE CR1 954 chr2 48443333 48444509 CR1-D2 656 + 48443333 48444509 0 3 47,492,318, 0,47,858, +,+,+, 248855 LINE CR1 954 chr2 48457311 48459401 CR1-E 698 - 48457311 48459401 0 3 1299,76,715, 0,1299,1375, -,-,-, 248863 LINE CR1 954 chr2 48482614 48484694 CR1-D2 550 + 48482614 48484694 0 2 1392,233, 0,1847, +,+, 248872 LINE CR1 955 chr2 48545780 48547086 Char12Mar1_GG 553 - 48545780 48547086 0 3 354,87,224, 0,995,1082, -,-,-, 248907 DNA hAT-Charlie 955 chr2 48555429 48557289 GGLTR8B 393 - 48555429 48557289 0 2 108,808, 0,1052, -,-, 248918 LTR ERVL 955 chr2 48576359 48576610 (ATAACT)n 378 + 48576359 48576610 0 2 12,66, 0,185, +,+, 248932 Simple_repeat Simple_repeat 955 chr2 48598348 48599582 CR1-Y1_Aves 467 - 48598348 48599582 0 2 580,134, 0,1100, -,-, 248941 LINE CR1 956 chr2 48644017 48644122 (CTTCTC)n 328 + 48644017 48644122 0 2 25,52, 0,53, +,+, 248964 Simple_repeat Simple_repeat 956 chr2 48672852 48674928 Charlie12_GG 652 - 48672852 48674928 0 2 59,1446, 0,630, -,-, 248979 DNA hAT-Charlie 957 chr2 48866754 48872097 Char12Mar1_GG 653 - 48866754 48872097 0 3 604,326,73, 0,4130,5270, -,-,-, 249092 DNA hAT-Charlie 957 chr2 48871212 48871972 Charlie12_GG 708 - 48871212 48871972 0 2 637,123, 0,637, -,-, 249094 DNA hAT-Charlie 958 chr2 48960350 48962017 CR1-E 425 + 48960350 48962017 0 2 830,223, 0,1444, +,+, 249147 LINE CR1 958 chr2 48969444 48969588 GGLTR12A 968 + 48969444 48969588 0 2 51,93, 0,51, +,+, 249163 LTR ERVL 958 chr2 48984565 48986827 CR1-C3 666 - 48984565 48986827 0 2 1760,247, 0,2015, -,-, 249178 LINE CR1 958 chr2 49017306 49018479 CR1-L3B_Croc 296 - 49017306 49018479 0 2 105,303, 0,870, -,-, 249193 LINE CR1 960 chr2 49194473 49195328 CR1-F2 595 + 49194473 49195328 0 2 439,416, 0,439, +,+, 249290 LINE CR1 960 chr2 49270580 49270794 CR1-Y1_Aves 571 + 49270580 49270794 0 2 123,73, 0,141, +,+, 249333 LINE CR1 961 chr2 49390709 49391079 AmnSINE1 299 + 49390709 49391079 0 2 101,160, 0,210, +,+, 249405 SINE 5S-Deu-L2 961 chr2 49405449 49405811 CR1-Y2_Aves 212 + 49405449 49405811 0 3 50,24,146, 0,158,216, +,+,+, 249410 LINE CR1 963 chr2 49553508 49554179 CR1-C4 640 - 49553508 49554179 0 3 76,41,554, 0,76,117, -,-,-, 249480 LINE CR1 963 chr2 49622166 49622809 UCON8 393 - 49622166 49622809 0 2 339,78, 0,565, -,-, 249532 DNA DNA 963 chr2 49627830 49628093 CR1-H 776 - 49627830 49628093 0 2 24,206, 0,57, -,-, 249537 LINE CR1 964 chr2 49761973 49762024 (TGTAA)n 548 + 49761973 49762024 0 2 13,6, 0,45, +,+, 249631 Simple_repeat Simple_repeat 964 chr2 49768695 49769517 CR1-L3B_Croc 313 - 49768695 49769517 0 3 70,162,206, 0,100,616, -,-,-, 249635 LINE CR1 964 chr2 49790905 49791452 LFSINE_Vert 328 - 49790905 49791452 0 2 310,113, 0,434, -,-, 249651 SINE tRNA 965 chr2 49825791 49825900 (T)n 820 + 49825791 49825900 0 2 35,37, 0,72, +,+, 249675 Simple_repeat Simple_repeat 965 chr2 49850122 49853333 GGLTR7-int 387 - 49850122 49853333 0 3 329,391,2330, 0,490,881, -,-,-, 249696 LTR ERV1 965 chr2 49854179 49857896 CR1-Y4 503 - 49854179 49857896 0 3 534,691,241, 0,2068,3476, -,-,-, 249699 LINE CR1 965 chr2 49880299 49882865 CR1-3_Croc 149 - 49880299 49882865 0 2 158,480, 0,2086, -,-, 249717 LINE CR1 965 chr2 49921481 49924123 Char12Mar1_GG 591 - 49921481 49924123 0 2 536,910, 0,1732, -,-, 249748 DNA hAT-Charlie 966 chr2 49938489 49940752 CR1-Y4 542 + 49938489 49940752 0 2 768,161, 0,2102, +,+, 249761 LINE CR1 966 chr2 49939281 49940593 CR1-D2 581 + 49939281 49940593 0 2 433,89, 0,1223, +,+, 249762 LINE CR1 966 chr2 49939713 49940346 Char12Mar1_GG 664 - 49939713 49940346 0 2 144,400, 0,233, -,-, 249763 DNA hAT-Charlie 966 chr2 49961151 49963493 CR1-C2 775 + 49961151 49963493 0 2 437,1239, 0,1103, +,+, 249780 LINE CR1 966 chr2 49962021 49962252 GGLTR3B1 585 + 49962021 49962252 0 2 93,138, 0,93, +,+, 249782 LTR ERVL 966 chr2 50034926 50035657 CR1-F2 533 - 50034926 50035657 0 2 396,259, 0,472, -,-, 249814 LINE CR1 966 chr2 50047198 50047609 CR1-D2 764 + 50047198 50047609 0 2 47,296, 0,115, +,+, 249822 LINE CR1 966 chr2 50058523 50059421 CR1-X1 645 + 50058523 50059421 0 3 146,353,399, 0,146,499, +,+,+, 249828 LINE CR1 967 chr2 50079972 50084753 GGERVL18-int 645 - 50079972 50084753 0 4 55,629,3760,333, 0,59,688,4448, -,-,-,-, 249842 LTR ERVL 967 chr2 50097074 50099068 CR1-C4 619 - 50097074 50099068 0 2 1894,100, 0,1894, -,-, 249851 LINE CR1 967 chr2 50164693 50166947 Mariner1_GG 560 - 50164693 50166947 0 2 797,399, 0,1855, -,-, 249886 DNA TcMar-Mariner 967 chr2 50167001 50168365 CR1-Y2_Aves 358 - 50167001 50168365 0 2 486,273, 0,1091, -,-, 249888 LINE CR1 968 chr2 50204473 50205552 CR1-E 296 + 50204473 50205552 0 2 165,331, 0,748, +,+, 249920 LINE CR1 968 chr2 50242077 50242130 (CTTT)n 432 + 50242077 50242130 0 2 8,27, 0,26, +,+, 249947 Simple_repeat Simple_repeat 968 chr2 50261549 50261868 CR1-H 235 + 50261549 50261868 0 2 240,79, 0,240, +,+, 249961 LINE CR1 968 chr2 50287293 50287599 GGLTR3C1 439 - 50287293 50287599 0 2 113,56, 0,250, -,-, 249977 LTR ERVL 968 chr2 50295813 50296449 CR1-Y2_Aves 215 + 50295813 50296449 0 2 380,236, 0,400, +,+, 249985 LINE CR1 969 chr2 50348467 50349329 Mariner1_GG 700 - 50348467 50349329 0 2 113,746, 0,116, -,-, 250014 DNA TcMar-Mariner 969 chr2 50416460 50417326 Char12Mar1_GG 566 - 50416460 50417326 0 3 300,266,300, 0,300,566, -,-,-, 250066 DNA hAT-Charlie 970 chr2 50526013 50532011 CR1-F0 222 + 50526013 50532011 0 2 308,578, 0,5420, +,+, 250152 LINE CR1 970 chr2 50526035 50529803 CR1-H 241 + 50526035 50529803 0 3 307,214,1104, 0,774,2664, +,+,+, 250153 LINE CR1 970 chr2 50526823 50528699 CR1-F 255 + 50526823 50528699 0 2 247,239, 0,1637, +,+, 250156 LINE CR1 970 chr2 50530659 50531449 GGERV20_I-int 497 + 50530659 50531449 0 2 312,465, 0,325, +,+, 250159 LTR ERVL 971 chr2 50604219 50604343 GGLTR3E1 794 - 50604219 50604343 0 2 54,70, 0,54, -,-, 250217 LTR ERVL 971 chr2 50606732 50606799 (TGTT)n 476 + 50606732 50606799 0 2 8,17, 0,50, +,+, 250222 Simple_repeat Simple_repeat 971 chr2 50611055 50612376 CR1-Y1_Aves 382 - 50611055 50612376 0 2 253,1052, 0,269, -,-, 250226 LINE CR1 971 chr2 50654594 50656690 CR1-C 788 + 50654594 50656690 0 2 604,1492, 0,604, +,+, 250252 LINE CR1 971 chr2 50678637 50679767 CR1-Y4 481 + 50678637 50679767 0 2 274,695, 0,435, +,+, 250267 LINE CR1 971 chr2 50678921 50679090 Charlie12_GG 230 + 50678921 50679090 0 2 34,82, 0,87, +,+, 250268 DNA hAT-Charlie 971 chr2 50713791 50714129 Char12Mar1_GG 523 - 50713791 50714129 0 2 136,202, 0,136, -,-, 250299 DNA hAT-Charlie 972 chr2 50804657 50806040 CR1-8_Crp 243 + 50804657 50806040 0 2 174,151, 0,1232, +,+, 250377 LINE CR1 972 chr2 50804809 50805729 CR1-E 524 - 50804809 50805729 0 2 266,620, 0,300, -,-, 250378 LINE CR1 972 chr2 50807414 50810067 CR1-D 710 + 50807414 50810067 0 2 877,633, 0,2020, +,+, 250381 LINE CR1 972 chr2 50808292 50809437 CR1-C 845 + 50808292 50809437 0 2 772,373, 0,772, +,+, 250382 LINE CR1 972 chr2 50819352 50820770 CR1-C2 757 + 50819352 50820770 0 2 516,410, 0,1008, +,+, 250386 LINE CR1 973 chr2 50878248 50878307 (AAAC)n 714 + 50878248 50878307 0 2 8,6, 0,53, +,+, 250429 Simple_repeat Simple_repeat 973 chr2 50985498 50985892 Char12Mar1_GG 589 - 50985498 50985892 0 2 256,138, 0,256, -,-, 250479 DNA hAT-Charlie 974 chr2 51044868 51047043 CR1-C4 538 + 51044868 51047043 0 2 141,561, 0,1614, +,+, 250513 LINE CR1 974 chr2 51102253 51102751 GGLTR3F2 802 - 51102253 51102751 0 2 227,233, 0,265, -,-, 250560 LTR ERVL 975 chr2 51130286 51133356 CR1-F 544 - 51130286 51133356 0 2 1339,1731, 0,1339, -,-, 250581 LINE CR1 975 chr2 51137947 51138223 GGLTR4A 448 - 51137947 51138223 0 2 120,125, 0,151, -,-, 250585 LTR ERVL 975 chr2 51161408 51167019 CR1-Y4 588 - 51161408 51167019 0 2 614,508, 0,5103, -,-, 250600 LINE CR1 975 chr2 51167204 51168360 CR1-F2 518 - 51167204 51168360 0 2 382,93, 0,1063, -,-, 250602 LINE CR1 975 chr2 51238984 51242631 CR1-C 819 + 51238984 51242631 0 2 491,3152, 0,495, +,+, 250647 LINE CR1 976 chr2 51252281 51252896 GGLTR3B1 725 + 51252281 51252896 0 2 486,129, 0,486, +,+, 250653 LTR ERVL 976 chr2 51302963 51304634 Mariner1_GG 623 - 51302963 51304634 0 2 440,553, 0,1118, -,-, 250699 DNA TcMar-Mariner 976 chr2 51351780 51354003 CR1-X 513 + 51351780 51354003 0 3 793,466,216, 0,1536,2007, +,+,+, 250741 LINE CR1 976 chr2 51369354 51370024 CR1-X2 381 - 51369354 51370024 0 2 192,478, 0,192, -,-, 250752 LINE CR1 977 chr2 51390322 51392233 CR1-X 564 + 51390322 51392233 0 2 765,1075, 0,836, +,+, 250768 LINE CR1 977 chr2 51392888 51393900 Char12Mar1_GG 473 - 51392888 51393900 0 2 375,637, 0,375, -,-, 250770 DNA hAT-Charlie 977 chr2 51462069 51463558 CR1-X2 569 + 51462069 51463558 0 3 121,72,691, 0,228,798, +,+,+, 250803 LINE CR1 978 chr2 51511529 51512953 CR1-C4 544 - 51511529 51512953 0 2 1147,277, 0,1147, -,-, 250830 LINE CR1 978 chr2 51539375 51539863 REP131 336 - 51539375 51539863 0 2 119,137, 0,351, -,-, 250839 DNA? DNA? 978 chr2 51546024 51546628 CR1-H2 753 - 51546024 51546628 0 2 49,555, 0,49, -,-, 250845 LINE CR1 978 chr2 51581460 51584051 CR1-F2 621 - 51581460 51584051 0 3 583,286,374, 0,583,2217, -,-,-, 250867 LINE CR1 978 chr2 51584300 51585639 CR1-Y1_Aves 480 - 51584300 51585639 0 2 65,1267, 0,72, -,-, 250869 LINE CR1 978 chr2 51601287 51601485 (TATG)n 148 + 51601287 51601485 0 2 21,82, 0,116, +,+, 250873 Simple_repeat Simple_repeat 978 chr2 51615285 51616949 CR1-F2 847 - 51615285 51616949 0 2 871,793, 0,871, -,-, 250882 LINE CR1 979 chr2 51722954 51723481 CR1-Y1_Aves 637 - 51722954 51723481 0 2 324,40, 0,487, -,-, 250938 LINE CR1 979 chr2 51746793 51752451 GGERVL18-int 794 + 51746793 51752451 0 4 341,3906,1036,353, 0,342,4269,5305, +,+,+,+, 250950 LTR ERVL 979 chr2 51759239 51761442 GGERV28_I-int 119 + 51759239 51761442 0 2 641,348, 0,1855, +,+, 250957 LTR ERVK 980 chr2 51780290 51781178 CR1-Y2_Aves 303 + 51780290 51781178 0 2 96,196, 0,692, +,+, 250970 LINE CR1 980 chr2 51802421 51803300 GGLTR12C 625 - 51802421 51803300 0 2 217,647, 0,232, -,-, 250985 LTR ERVL 980 chr2 51856521 51856938 GGLTR3D 304 + 51856521 51856938 0 2 141,227, 0,190, +,+, 251029 LTR ERVL 980 chr2 51881668 51884456 CR1-F2 603 + 51881668 51884456 0 2 2193,595, 0,2193, +,+, 251054 LINE CR1 980 chr2 51892623 51894329 CR1-Y2_Aves 113 - 51892623 51894329 0 2 413,767, 0,939, -,-, 251060 LINE CR1 981 chr2 51937746 51938667 Mariner1_GG 580 - 51937746 51938667 0 2 795,126, 0,795, -,-, 251094 DNA TcMar-Mariner 981 chr2 51941003 51941336 GGERVL-C-int 754 - 51941003 51941336 0 2 150,183, 0,150, -,-, 251097 LTR ERVL 981 chr2 51942193 51943422 CR1-C2 724 + 51942193 51943422 0 2 434,493, 0,736, +,+, 251099 LINE CR1 981 chr2 51948455 51948947 CR1-Y3 701 - 51948455 51948947 0 2 140,352, 0,140, -,-, 251103 LINE CR1 982 chr2 52103514 52104334 CR1-E 714 - 52103514 52104334 0 2 752,68, 0,752, -,-, 251187 LINE CR1 983 chr2 52179469 52179896 GGERVL-A-int 404 + 52179469 52179896 0 2 154,170, 0,257, +,+, 251235 LTR ERVL 983 chr2 52180057 52185335 GGERVL-A-int 500 - 52180057 52185335 0 4 1884,1158,277,554, 0,2707,4444,4724, -,-,-,-, 251237 LTR ERVL 983 chr2 52200794 52204474 CR1-X2 552 + 52200794 52204474 0 2 261,119, 0,3561, +,+, 251249 LINE CR1 983 chr2 52201059 52204355 GGLTR10D 862 + 52201059 52204355 0 3 345,2606,345, 0,345,2951, +,+,+, 251250 LTR ERVK 983 chr2 52205283 52207603 CR1-X 547 + 52205283 52207603 0 3 424,799,537, 0,424,1783, +,+,+, 251251 LINE CR1 983 chr2 52241952 52245922 GGLTR7-int 607 + 52241952 52245922 0 3 575,504,2512, 0,575,1458, +,+,+, 251273 LTR ERV1 983 chr2 52268013 52272940 GGERVL18-int 495 - 52268013 52272940 0 3 341,3712,841, 0,345,4086, -,-,-, 251288 LTR ERVL 984 chr2 52303463 52314811 GGERV22_LTR 611 - 52303463 52314811 0 2 185,96, 0,11252, -,-, 251308 LTR ERVL 984 chr2 52303648 52314713 GGLTR11-int 752 + 52303648 52314713 0 9 533,642,1392,721,735,256,1881,159,108, 0,920,1597,6841,7567,8302,8915,10796,10957, +,+,+,+,+,+,+,+,+, 251309 LTR ERV1 984 chr2 52306625 52310491 CR1-C 789 + 52306625 52310491 0 2 2244,1285, 0,2581, +,+, 251311 LINE CR1 988 chr2 52841808 52844142 GGLTR3E3 422 + 52841808 52844142 0 2 272,2062, 0,272, +,+, 251368 LTR ERVL 988 chr2 52844137 52845983 GGERVL-C-int 678 + 52844137 52845983 0 2 1351,495, 0,1351, +,+, 251369 LTR ERVL 988 chr2 52854462 52856734 GGLTR3E3 355 + 52854462 52856734 0 2 207,2065, 0,207, +,+, 251375 LTR ERVL 988 chr2 52856729 52858575 GGERVL-C-int 678 + 52856729 52858575 0 2 1351,495, 0,1351, +,+, 251376 LTR ERVL 988 chr2 52872796 52875524 CR1-C 807 - 52872796 52875524 0 2 2133,595, 0,2133, -,-, 251383 LINE CR1 988 chr2 52895557 52897558 CR1-D 504 + 52895557 52897558 0 2 673,1270, 0,731, +,+, 251401 LINE CR1 988 chr2 52918353 52920753 CR1-F 391 - 52918353 52920753 0 2 2111,256, 0,2144, -,-, 251426 LINE CR1 988 chr2 52931547 52935561 GGERV20_I-int 245 + 52931547 52935561 0 6 138,191,1225,288,328,530, 0,404,1354,2859,3155,3484, +,+,+,+,+,+, 251440 LTR ERVL 989 chr2 52957619 52958788 CR1-C4 632 - 52957619 52958788 0 2 189,980, 0,189, -,-, 251460 LINE CR1 989 chr2 52974195 52980261 CR1-C2 684 - 52974195 52980261 0 2 934,1430, 0,4636, -,-, 251468 LINE CR1 989 chr2 53011082 53020386 CR1-F2 361 - 53011082 53020386 0 3 677,525,2919, 0,5446,6385, -,-,-, 251483 LINE CR1 989 chr2 53023661 53027597 GGLTR3B1 773 - 53023661 53027597 0 5 798,1770,206,205,112, 0,798,2568,3094,3824, -,-,-,-,-, 251488 LTR ERVL 989 chr2 53026423 53026755 GGERV10_LTR 784 + 53026423 53026755 0 2 62,165, 0,167, +,+, 251489 LTR ERVL 989 chr2 53035729 53035938 CR1-D2 631 + 53035729 53035938 0 2 89,107, 0,102, +,+, 251497 LINE CR1 989 chr2 53039420 53042222 GGERVL18-int 489 + 53039420 53042222 0 3 526,1966,292, 0,544,2510, +,+,+, 251499 LTR ERVL 989 chr2 53048882 53049703 CR1-X2 323 + 53048882 53049703 0 2 552,269, 0,552, +,+, 251502 LINE CR1 989 chr2 53073847 53075102 CR1-F2 677 + 53073847 53075102 0 2 640,615, 0,640, +,+, 251521 LINE CR1 123 chr2 53080501 53084918 CR1-G 656 + 53080501 53084918 0 3 491,2680,332, 0,1405,4085, +,+,+, 251527 LINE CR1 990 chr2 53087322 53087930 CR1-H 378 + 53087322 53087930 0 3 64,434,77, 0,87,531, +,+,+, 251535 LINE CR1 990 chr2 53106423 53107299 GGLTR3G1 765 + 53106423 53107299 0 2 580,294, 0,582, +,+, 251551 LTR ERVL 990 chr2 53114443 53119023 GGERVL-C-int 760 + 53114443 53119023 0 4 160,2837,509,551, 0,160,3520,4029, +,+,+,+, 251554 LTR ERVL 990 chr2 53123011 53123245 CR1-X2 655 + 53123011 53123245 0 2 126,70, 0,164, +,+, 251559 LINE CR1 990 chr2 53124888 53126352 GGLTR7-int 383 + 53124888 53126352 0 3 237,293,93, 0,698,1371, +,+,+, 251560 LTR ERV1 990 chr2 53126535 53129614 GGLTR7-int 402 + 53126535 53129614 0 4 499,867,1227,103, 0,591,1458,2976, +,+,+,+, 251563 LTR ERV1 990 chr2 53132863 53133949 GGERVL18-int 475 + 53132863 53133949 0 3 449,57,319, 0,710,767, +,+,+, 251568 LTR ERVL 990 chr2 53136121 53138273 GGERV28_I-int 218 + 53136121 53138273 0 2 528,329, 0,1823, +,+, 251569 LTR ERVK 990 chr2 53146042 53150316 CR1-Y4 538 - 53146042 53150316 0 2 702,189, 0,4085, -,-, 251575 LINE CR1 990 chr2 53158976 53159657 CR1-Y1_Aves 592 + 53158976 53159657 0 2 617,50, 0,631, +,+, 251580 LINE CR1 990 chr2 53172525 53174707 CR1-H2 657 + 53172525 53174707 0 2 1249,166, 0,2016, +,+, 251587 LINE CR1 990 chr2 53182379 53185264 GGERV20_I-int 481 + 53182379 53185264 0 3 320,559,1996, 0,323,889, +,+,+, 251595 LTR ERVL 990 chr2 53185264 53191274 GGERV21_LTR 561 + 53185264 53191274 0 3 305,5386,318, 0,306,5692, +,+,+, 251596 LTR ERVL 990 chr2 53203139 53203945 CR1-F2 404 - 53203139 53203945 0 2 465,341, 0,465, -,-, 251603 LINE CR1 990 chr2 53208877 53214688 GGERV10_LTR 803 + 53208877 53214688 0 3 221,5383,206, 0,222,5605, +,+,+, 251608 LTR ERVL 991 chr2 53226892 53230338 GGLTR10C2 627 + 53226892 53230338 0 3 376,2717,353, 0,376,3093, +,+,+, 251617 LTR ERVK 991 chr2 53230338 53230557 Charlie12_GG 410 + 53230338 53230557 0 2 63,114, 0,105, +,+, 251618 DNA hAT-Charlie 991 chr2 53258541 53262121 GGLTR7B 743 + 53258541 53262121 0 2 3450,130, 0,3450, +,+, 251639 LTR ERV1 991 chr2 53263001 53263737 CR1-Y2_Aves 182 + 53263001 53263737 0 2 197,259, 0,477, +,+, 251642 LINE CR1 991 chr2 53271211 53271672 CR1-Y1_Aves 264 - 53271211 53271672 0 2 272,126, 0,335, -,-, 251653 LINE CR1 991 chr2 53283379 53285260 CR1-X2 479 + 53283379 53285260 0 3 474,821,460, 0,474,1421, +,+,+, 251666 LINE CR1 991 chr2 53288589 53289161 CR1-C4 144 + 53288589 53289161 0 2 153,375, 0,197, +,+, 251670 LINE CR1 991 chr2 53289874 53290862 CR1-Y4 577 + 53289874 53290862 0 2 57,560, 0,428, +,+, 251672 LINE CR1 991 chr2 53323636 53324106 GGLTR3A 683 + 53323636 53324106 0 2 330,102, 0,368, +,+, 251703 LTR ERVL 991 chr2 53328755 53337960 CR1-D2 403 + 53328755 53337960 0 3 625,995,323, 0,6231,8882, +,+,+, 251708 LINE CR1 991 chr2 53329380 53334828 GGERV10_LTR 683 - 53329380 53334828 0 6 160,62,2008,1875,1068,160, 0,261,323,2344,4219,5288, -,-,-,-,-,-, 251709 LTR ERVL 991 chr2 53341243 53342129 GGLTR5B 494 + 53341243 53342129 0 2 361,195, 0,691, +,+, 251715 LTR ERVL 991 chr2 53342736 53343418 GGERVL-A-int 445 + 53342736 53343418 0 2 245,40, 0,642, +,+, 251717 LTR ERVL 123 chr2 53343711 53346709 CR1-D2 538 - 53343711 53346709 0 3 323,272,1961, 0,710,1037, -,-,-, 251719 LINE CR1 992 chr2 53346868 53352055 GGERV20_I-int 725 + 53346868 53352055 0 5 160,1069,1875,2007,62, 0,161,1230,3118,5125, +,+,+,+,+, 251722 LTR ERVL 992 chr2 53353300 53353821 GGLTR3F2 802 + 53353300 53353821 0 2 416,68, 0,453, +,+, 251724 LTR ERVL 992 chr2 53360610 53361524 GGLTR3C1 560 - 53360610 53361524 0 2 532,375, 0,539, -,-, 251730 LTR ERVL 992 chr2 53363062 53364185 CR1-E 394 + 53363062 53364185 0 2 696,421, 0,702, +,+, 251734 LINE CR1 992 chr2 53364554 53364900 GGERV10_LTR 648 + 53364554 53364900 0 2 65,151, 0,195, +,+, 251735 LTR ERVL 992 chr2 53366899 53369130 GGERV28_I-int 159 - 53366899 53369130 0 2 314,525, 0,1706, -,-, 251736 LTR ERVK 992 chr2 53375673 53376588 GGLTR3C1 543 - 53375673 53376588 0 2 532,376, 0,539, -,-, 251742 LTR ERVL 992 chr2 53378123 53379245 CR1-E 398 + 53378123 53379245 0 2 696,420, 0,702, +,+, 251746 LINE CR1 992 chr2 53379614 53379960 GGERV10_LTR 648 + 53379614 53379960 0 2 65,151, 0,195, +,+, 251747 LTR ERVL 992 chr2 53381961 53384183 GGERV28_I-int 162 - 53381961 53384183 0 2 314,514, 0,1708, -,-, 251748 LTR ERVK 992 chr2 53387050 53391159 GGERVL18-int 608 + 53387050 53391159 0 4 441,2869,448,346, 0,442,3311,3763, +,+,+,+, 251751 LTR ERVL 992 chr2 53395720 53400502 GGLTR11-int 759 + 53395720 53400502 0 4 1817,1659,761,506, 0,1856,3515,4276, +,+,+,+, 251755 LTR ERV1 992 chr2 53404420 53406831 CR1-B2 694 - 53404420 53406831 0 2 924,1112, 0,1299, -,-, 251765 LINE CR1 992 chr2 53415966 53417081 GGERVL18-int 710 - 53415966 53417081 0 2 338,777, 0,338, -,-, 251778 LTR ERVL 992 chr2 53418554 53420443 GGERVL-C-int 608 - 53418554 53420443 0 3 105,784,202, 0,903,1687, -,-,-, 251781 LTR ERVL 992 chr2 53439766 53441886 GGERV28_I-int 171 + 53439766 53441886 0 2 412,312, 0,1808, +,+, 251793 LTR ERVK 992 chr2 53444847 53445197 CR1-Y1_Aves 530 - 53444847 53445197 0 2 205,145, 0,205, -,-, 251798 LINE CR1 992 chr2 53463690 53469518 GGERV10_LTR 832 + 53463690 53469518 0 3 222,5385,220, 0,223,5608, +,+,+, 251821 LTR ERVL 992 chr2 53473319 53475838 GGERV28_I-int 250 + 53473319 53475838 0 4 563,560,131,61, 0,1157,2164,2458, +,+,+,+, 251822 LTR ERVK 993 chr2 53481675 53482947 CR1-C4 620 + 53481675 53482947 0 2 209,492, 0,780, +,+, 251828 LINE CR1 993 chr2 53482947 53486918 GGLTR3A 653 + 53482947 53486918 0 2 565,3406, 0,565, +,+, 251830 LTR ERVL 993 chr2 53488154 53491912 GGERV10_LTR 689 + 53488154 53491912 0 4 2379,1027,86,160, 0,2379,3406,3598, +,+,+,+, 251833 LTR ERVL 993 chr2 53493957 53498415 GGERVL-A-int 706 - 53493957 53498415 0 3 2063,1829,565, 0,2064,3893, -,-,-, 251837 LTR ERVL 993 chr2 53498415 53499687 CR1-C4 620 - 53498415 53499687 0 2 492,209, 0,1063, -,-, 251838 LINE CR1 993 chr2 53532145 53532293 GGLTR3G2 670 - 53532145 53532293 0 2 53,51, 0,97, -,-, 251880 LTR ERVL 993 chr2 53534343 53534773 TguLTR5e 255 + 53534343 53534773 0 2 211,155, 0,275, +,+, 251884 LTR ERVL 993 chr2 53537992 53538586 Charlie12_GGa 436 - 53537992 53538586 0 2 248,341, 0,253, -,-, 251891 DNA hAT-Charlie 993 chr2 53538667 53541411 CR1-Y 750 - 53538667 53541411 0 2 193,409, 0,2335, -,-, 251892 LINE CR1 993 chr2 53538858 53539446 CR1-H 637 + 53538858 53539446 0 2 406,182, 0,406, +,+, 251893 LINE CR1 993 chr2 53567324 53568342 CR1-F2 758 - 53567324 53568342 0 2 474,527, 0,491, -,-, 251916 LINE CR1 993 chr2 53574270 53575218 CR1-D2 508 + 53574270 53575218 0 2 426,512, 0,436, +,+, 251923 LINE CR1 993 chr2 53577307 53577890 GGLTR5B 309 + 53577307 53577890 0 2 257,145, 0,438, +,+, 251928 LTR ERVL 993 chr2 53586809 53588969 CR1-B2 568 - 53586809 53588969 0 2 923,249, 0,1911, -,-, 251939 LINE CR1 993 chr2 53590534 53591457 CR1-F2 392 + 53590534 53591457 0 2 650,270, 0,653, +,+, 251941 LINE CR1 993 chr2 53596526 53596631 (T)n 726 + 53596526 53596631 0 2 56,27, 0,78, +,+, 251947 Simple_repeat Simple_repeat 993 chr2 53603692 53605487 ENS3-int 403 - 53603692 53605487 0 3 943,278,319, 0,943,1476, -,-,-, 251954 LTR ERVL 994 chr2 53640712 53641046 GGERV10_LTR 559 + 53640712 53641046 0 2 87,160, 0,174, +,+, 251996 LTR ERVL 994 chr2 53645471 53646155 GGLTR11-int 529 - 53645471 53646155 0 2 225,115, 0,569, -,-, 252002 LTR ERV1 994 chr2 53651568 53653490 CR1-D2 521 - 53651568 53653490 0 3 230,86,336, 0,740,1586, -,-,-, 252011 LINE CR1 994 chr2 53655313 53661115 GGLTR3F1 867 + 53655313 53661115 0 2 491,5309, 0,493, +,+, 252014 LTR ERVL 994 chr2 53661115 53661641 GGLTR3F1 897 + 53661115 53661641 0 2 36,490, 0,36, +,+, 252015 LTR ERVL 994 chr2 53669087 53669927 Charlie12_GG 627 - 53669087 53669927 0 2 56,293, 0,547, -,-, 252023 DNA hAT-Charlie 994 chr2 53671273 53672549 Charlie12_GG 482 - 53671273 53672549 0 3 741,84,124, 0,1041,1152, -,-,-, 252026 DNA hAT-Charlie 994 chr2 53675051 53675745 GGLTR12C 518 - 53675051 53675745 0 2 244,134, 0,560, -,-, 252028 LTR ERVL 994 chr2 53677128 53677396 CR1-Y2_Aves 335 + 53677128 53677396 0 2 95,162, 0,106, +,+, 252031 LINE CR1 994 chr2 53679306 53699390 CR1-D2 489 + 53679306 53699390 0 4 1495,562,1290,390, 0,12175,18036,19694, +,+,+,+, 252035 LINE CR1 994 chr2 53680802 53690458 GGERV22_LTR 568 - 53680802 53690458 0 3 118,222,4742, 0,4688,4914, -,-,-, 252036 LTR ERVL 994 chr2 53711878 53717941 CR1-Y2 643 - 53711878 53717941 0 3 90,767,197, 0,538,5866, -,-,-, 252051 LINE CR1 994 chr2 53713186 53717747 GGERVL-A-int 740 - 53713186 53717747 0 4 568,45,3478,427, 0,568,655,4134, -,-,-,-, 252053 LTR ERVL 994 chr2 53718324 53718806 CR1-E 678 - 53718324 53718806 0 2 399,83, 0,399, -,-, 252055 LINE CR1 994 chr2 53723143 53726688 GGERVL-B-int 620 - 53723143 53726688 0 2 32,3500, 0,45, -,-, 252058 LTR ERVL 994 chr2 53726789 53732975 CR1-F2 575 + 53726789 53732975 0 3 2088,693,58, 0,2435,6128, +,+,+, 252059 LINE CR1 124 chr2 53735718 53739615 CR1-D2 703 - 53735718 53739615 0 2 385,79, 0,3818, -,-, 252065 LINE CR1 995 chr2 53757134 53758406 Char12Mar1_GG 493 - 53757134 53758406 0 2 96,162, 0,1110, -,-, 252086 DNA hAT-Charlie 995 chr2 53764250 53764857 CR1-Y2_Aves 465 - 53764250 53764857 0 2 473,83, 0,524, -,-, 252094 LINE CR1 995 chr2 53787541 53790610 CR1-F2 409 + 53787541 53790610 0 3 2528,248,283, 0,2538,2786, +,+,+, 252110 LINE CR1 995 chr2 53796918 53803744 GGERVL18-int 646 + 53796918 53803744 0 2 2418,2252, 0,4574, +,+, 252119 LTR ERVL 995 chr2 53816586 53821840 CR1-F 559 + 53816586 53821840 0 3 839,75,2699, 0,846,2555, +,+,+, 252132 LINE CR1 995 chr2 53822094 53822665 CR1-C 606 - 53822094 53822665 0 2 518,53, 0,518, -,-, 252136 LINE CR1 995 chr2 53822678 53823809 CR1-G 400 - 53822678 53823809 0 2 468,649, 0,482, -,-, 252137 LINE CR1 995 chr2 53827554 53828267 GGERVL-C-int 539 + 53827554 53828267 0 2 642,71, 0,642, +,+, 252142 LTR ERVL 995 chr2 53833038 53836438 GGERVL18-int 654 - 53833038 53836438 0 4 83,2797,235,266, 0,91,2899,3134, -,-,-,-, 252145 LTR ERVL 995 chr2 53837287 53837610 GGERV10_LTR 704 - 53837287 53837610 0 2 159,62, 0,261, -,-, 252147 LTR ERVL 995 chr2 53844762 53845987 CR1-D 690 - 53844762 53845987 0 2 310,594, 0,631, -,-, 252152 LINE CR1 995 chr2 53860634 53861331 CR1-D 777 + 53860634 53861331 0 2 33,660, 0,37, +,+, 252162 LINE CR1 996 chr2 53878849 53883012 CR1-C4 513 - 53878849 53883012 0 2 973,420, 0,3743, -,-, 252184 LINE CR1 996 chr2 53887643 53888387 GGERVL18-int 345 + 53887643 53888387 0 3 194,156,256, 0,332,488, +,+,+, 252194 LTR ERVL 996 chr2 53908088 53910287 CR1-F 616 - 53908088 53910287 0 2 1676,155, 0,2044, -,-, 252225 LINE CR1 996 chr2 53939925 53943407 CR1-D 585 - 53939925 53943407 0 3 2334,824,297, 0,2334,3185, -,-,-, 252253 LINE CR1 996 chr2 53953413 53958183 CR1-C4 404 + 53953413 53958183 0 3 1419,612,201, 0,3537,4569, +,+,+, 252268 LINE CR1 996 chr2 53954889 53956704 CR1-C4 321 + 53954889 53956704 0 2 163,103, 0,1712, +,+, 252270 LINE CR1 996 chr2 53970463 53971265 GGLTR12C 462 - 53970463 53971265 0 2 236,112, 0,690, -,-, 252285 LTR ERVL 996 chr2 53972465 53973309 GGLTR7-int 814 - 53972465 53973309 0 3 350,260,212, 0,350,632, -,-,-, 252287 LTR ERV1 996 chr2 53973547 53976219 GGERV28_I-int 191 - 53973547 53976219 0 2 1994,376, 0,2296, -,-, 252288 LTR ERVK 996 chr2 53987593 53996240 CR1-F 266 - 53987593 53996240 0 2 25,558, 0,8089, -,-, 252298 LINE CR1 996 chr2 53987692 53995580 CR1-D2 659 - 53987692 53995580 0 3 413,64,871, 0,6936,7017, -,-,-, 252300 LINE CR1 996 chr2 53988117 53994628 GGERVL18-int 536 - 53988117 53994628 0 4 282,635,4656,301, 0,282,1499,6210, -,-,-,-, 252301 LTR ERVL 996 chr2 53997415 53999675 CR1-F 135 + 53997415 53999675 0 2 299,1350, 0,910, +,+, 252304 LINE CR1 997 chr2 54002721 54009561 Charlie12_GG 551 - 54002721 54009561 0 3 366,298,131, 0,6387,6709, -,-,-, 252312 DNA hAT-Charlie 997 chr2 54003087 54009118 GGERV10_LTR 554 - 54003087 54009118 0 5 160,90,5365,156,82, 0,249,339,5705,5949, -,-,-,-,-, 252313 LTR ERVL 997 chr2 54014628 54017294 GGERVL18-int 707 - 54014628 54017294 0 4 283,808,1250,325, 0,283,1091,2341, -,-,-,-, 252317 LTR ERVL 997 chr2 54022125 54027113 GGERV20_I-int 473 - 54022125 54027113 0 6 193,785,1477,219,517,244, 0,194,1179,3189,3447,4744, -,-,-,-,-,-, 252324 LTR ERVL 997 chr2 54026078 54026863 CR1-C2 772 - 54026078 54026863 0 2 650,116, 0,669, -,-, 252326 LINE CR1 997 chr2 54027108 54031433 GGERVL18-int 616 - 54027108 54031433 0 2 1398,2200, 0,2125, -,-, 252327 LTR ERVL 997 chr2 54031454 54032617 GGERV20_I-int 492 + 54031454 54032617 0 3 107,615,79, 0,138,1084, +,+,+, 252329 LTR ERVL 997 chr2 54032207 54032538 GGERV10_LTR 643 - 54032207 54032538 0 2 160,64, 0,267, -,-, 252331 LTR ERVL 997 chr2 54038665 54040116 GGERV20_I-int 285 + 54038665 54040116 0 2 740,456, 0,995, +,+, 252340 LTR ERVL 997 chr2 54040136 54043656 GGERVL18-int 595 + 54040136 54043656 0 3 1592,1155,272, 0,2089,3248, +,+,+, 252342 LTR ERVL 997 chr2 54060160 54063015 CR1-Y1_Aves 350 - 54060160 54063015 0 2 957,1369, 0,1486, -,-, 252357 LINE CR1 997 chr2 54069930 54074144 CR1-H 720 - 54069930 54074144 0 2 796,3418, 0,796, -,-, 252369 LINE CR1 997 chr2 54078801 54079554 GGLTR12C 224 - 54078801 54079554 0 2 445,187, 0,566, -,-, 252374 LTR ERVL 997 chr2 54079929 54085608 GGERVL18-int 412 - 54079929 54085608 0 5 288,1723,975,970,399, 0,306,2029,3004,5280, -,-,-,-,-, 252377 LTR ERVL 997 chr2 54089088 54095100 GGERVL18-LTR 802 - 54089088 54095100 0 4 136,214,5279,341, 0,178,392,5671, -,-,-,-, 252384 LTR ERVL 997 chr2 54119601 54122171 GGERV20_I-int 497 - 54119601 54122171 0 4 315,85,135,1520, 0,315,401,1050, -,-,-,-, 252408 LTR ERVL 997 chr2 54128413 54130765 CR1-F 404 - 54128413 54130765 0 2 1098,1253, 0,1099, -,-, 252422 LINE CR1 998 chr2 54133776 54134647 Char12Mar1_GG 572 - 54133776 54134647 0 2 270,288, 0,583, -,-, 252425 DNA hAT-Charlie 998 chr2 54138658 54138974 GGERV10_LTR 579 - 54138658 54138974 0 2 145,87, 0,229, -,-, 252428 LTR ERVL 998 chr2 54147445 54148293 CR1-C3 613 - 54147445 54148293 0 2 729,119, 0,729, -,-, 252437 LINE CR1 998 chr2 54149915 54151748 GGLTR8B 476 + 54149915 54151748 0 2 423,79, 0,1754, +,+, 252439 LTR ERVL 998 chr2 54161877 54163020 CR1-C2 199 - 54161877 54163020 0 2 326,586, 0,557, -,-, 252450 LINE CR1 998 chr2 54167109 54172383 GGERVL18-int 606 + 54167109 54172383 0 3 2709,633,319, 0,4318,4955, +,+,+, 252453 LTR ERVL 998 chr2 54169796 54171427 GGERVL18-int 609 - 54169796 54171427 0 3 791,504,327, 0,791,1304, -,-,-, 252454 LTR ERVL 998 chr2 54172913 54173348 CR1-E 798 - 54172913 54173348 0 2 404,31, 0,404, -,-, 252456 LINE CR1 998 chr2 54187275 54192206 CR1-D2 675 - 54187275 54192206 0 3 445,115,341, 0,807,4590, -,-,-, 252476 LINE CR1 998 chr2 54188216 54191484 GGLTR7A 816 - 54188216 54191484 0 2 369,243, 0,3025, -,-, 252477 LTR ERV1 998 chr2 54203640 54203720 (AC)n 947 + 54203640 54203720 0 2 17,34, 0,46, +,+, 252489 Simple_repeat Simple_repeat 998 chr2 54205472 54206475 CR1-Y4 516 + 54205472 54206475 0 2 172,252, 0,751, +,+, 252491 LINE CR1 998 chr2 54207413 54207908 GGLTR3F2 798 + 54207413 54207908 0 2 234,227, 0,268, +,+, 252493 LTR ERVL 998 chr2 54228775 54229422 CR1-E 552 + 54228775 54229422 0 2 564,83, 0,564, +,+, 252513 LINE CR1 998 chr2 54229698 54231684 GGERVL18-int 624 + 54229698 54231684 0 3 68,191,624, 0,811,1362, +,+,+, 252514 LTR ERVL 998 chr2 54231706 54234212 CR1-X2 388 - 54231706 54234212 0 3 1120,829,224, 0,1122,2282, -,-,-, 252516 LINE CR1 998 chr2 54235832 54236710 GGERVL18-int 494 + 54235832 54236710 0 3 244,332,294, 0,249,584, +,+,+, 252524 LTR ERVL 998 chr2 54250624 54251064 Char12Mar1_GG 545 - 54250624 54251064 0 2 365,75, 0,365, -,-, 252535 DNA hAT-Charlie 999 chr2 54287078 54288175 GGLTR7-int 274 - 54287078 54288175 0 2 296,219, 0,878, -,-, 252559 LTR ERV1 999 chr2 54319660 54320999 Char12Mar1_GG 626 - 54319660 54320999 0 2 213,215, 0,1124, -,-, 252589 DNA hAT-Charlie 999 chr2 54320997 54322289 Char12Mar1_GG 421 - 54320997 54322289 0 2 115,283, 0,1009, -,-, 252591 DNA hAT-Charlie 999 chr2 54324239 54327324 CR1-C2 790 - 54324239 54327324 0 2 940,1662, 0,1423, -,-, 252594 LINE CR1 999 chr2 54335162 54335485 GGERV10_LTR 573 - 54335162 54335485 0 2 156,52, 0,271, -,-, 252605 LTR ERVL 999 chr2 54340216 54340748 GGERVL18-LTR 596 - 54340216 54340748 0 2 183,275, 0,257, -,-, 252608 LTR ERVL 999 chr2 54361676 54365098 CR1-C 502 + 54361676 54365098 0 2 298,2580, 0,842, +,+, 252623 LINE CR1 999 chr2 54366808 54367604 CR1-C3 674 + 54366808 54367604 0 2 112,180, 0,616, +,+, 252629 LINE CR1 999 chr2 54370971 54371369 GGLTR11 441 - 54370971 54371369 0 2 116,280, 0,118, -,-, 252635 LTR ERV1 999 chr2 54374216 54375977 CR1-F2 872 + 54374216 54375977 0 2 1101,660, 0,1101, +,+, 252643 LINE CR1 999 chr2 54381336 54384515 GGLTR7-int 281 - 54381336 54384515 0 4 776,92,378,239, 0,1297,2047,2940, -,-,-,-, 252647 LTR ERV1 1000 chr2 54433992 54434708 CR1-D2 655 - 54433992 54434708 0 2 457,254, 0,462, -,-, 252677 LINE CR1 1000 chr2 54471468 54474179 CR1-Y1_Aves 305 - 54471468 54474179 0 2 800,539, 0,2172, -,-, 252695 LINE CR1 1000 chr2 54508221 54511635 GGERVL18-int 699 + 54508221 54511635 0 3 265,2803,346, 0,265,3068, +,+,+, 252721 LTR ERVL 1000 chr2 54519962 54520379 CR1-H 792 - 54519962 54520379 0 2 235,182, 0,235, -,-, 252726 LINE CR1 1000 chr2 54520916 54521355 Mariner1b_GG 370 - 54520916 54521355 0 2 325,110, 0,329, -,-, 252727 DNA TcMar-Mariner 15 chr2 54521574 54526134 CR1-F 391 - 54521574 54526134 0 2 3213,913, 0,3647, -,-, 252728 LINE CR1 1001 chr2 54527067 54529996 CR1-C4 504 + 54527067 54529996 0 2 719,1739, 0,1190, +,+, 252731 LINE CR1 1001 chr2 54531077 54533929 CR1-C2 711 + 54531077 54533929 0 2 2055,797, 0,2055, +,+, 252735 LINE CR1 1001 chr2 54588723 54592462 CR1-D 607 - 54588723 54592462 0 3 609,89,773, 0,971,2966, -,-,-, 252776 LINE CR1 1001 chr2 54589778 54591691 CR1-H2 856 - 54589778 54591691 0 2 867,1032, 0,881, -,-, 252777 LINE CR1 1001 chr2 54593008 54593277 CR1-Y 485 + 54593008 54593277 0 2 132,105, 0,164, +,+, 252779 LINE CR1 1001 chr2 54595131 54597024 CR1-D 742 + 54595131 54597024 0 3 566,580,161, 0,566,1732, +,+,+, 252785 LINE CR1 1001 chr2 54599159 54600434 CR1-F2 645 - 54599159 54600434 0 2 304,610, 0,665, -,-, 252789 LINE CR1 1001 chr2 54608744 54611335 GGLTR3C1 620 - 54608744 54611335 0 6 196,211,109,625,730,174, 0,573,923,1032,1657,2417, -,-,-,-,-,-, 252795 LTR ERVL 1001 chr2 54612466 54614429 GGERV28_I-int 235 - 54612466 54614429 0 3 106,83,310, 0,951,1653, -,-,-, 252801 LTR ERVK 1001 chr2 54617072 54618815 GGERVL-A-int 608 - 54617072 54618815 0 2 1004,739, 0,1004, -,-, 252804 LTR ERVL 1001 chr2 54618910 54619789 GGERVL-A-int 387 + 54618910 54619789 0 2 201,619, 0,260, +,+, 252806 LTR ERVL 1001 chr2 54623673 54625431 CR1-Y1_Aves 385 + 54623673 54625431 0 2 102,261, 0,1497, +,+, 252811 LINE CR1 1001 chr2 54637252 54637949 CR1-C4 526 + 54637252 54637949 0 2 236,461, 0,236, +,+, 252822 LINE CR1 1001 chr2 54637963 54639971 CR1-Y 727 + 54637963 54639971 0 2 1349,375, 0,1633, +,+, 252823 LINE CR1 1002 chr2 54662508 54664319 GGLTR5B 579 + 54662508 54664319 0 2 152,174, 0,1637, +,+, 252838 LTR ERVL 1002 chr2 54665566 54665818 GGLTR5B 517 - 54665566 54665818 0 2 119,119, 0,133, -,-, 252844 LTR ERVL 1002 chr2 54670206 54670924 Mariner1_GG 550 - 54670206 54670924 0 2 385,333, 0,385, -,-, 252848 DNA TcMar-Mariner 1002 chr2 54682440 54684015 CR1-F 795 + 54682440 54684015 0 2 293,1282, 0,293, +,+, 252863 LINE CR1 1002 chr2 54688313 54688875 CR1-D2 637 - 54688313 54688875 0 2 410,152, 0,410, -,-, 252868 LINE CR1 1002 chr2 54690886 54692104 CR1-X2 516 + 54690886 54692104 0 2 880,318, 0,900, +,+, 252870 LINE CR1 1002 chr2 54709750 54710888 GGERV20_I-int 324 + 54709750 54710888 0 2 262,876, 0,262, +,+, 252886 LTR ERVL 1002 chr2 54710909 54714880 GGERVL18-int 501 + 54710909 54714880 0 2 967,2698, 0,1273, +,+, 252887 LTR ERVL 1002 chr2 54731880 54733496 CR1-F 256 + 54731880 54733496 0 2 367,451, 0,1165, +,+, 252911 LINE CR1 1002 chr2 54735023 54736175 GGLTR8B 346 + 54735023 54736175 0 2 801,157, 0,995, +,+, 252916 LTR ERVL 1002 chr2 54743723 54746974 GGERVL18-int 331 + 54743723 54746974 0 3 840,1296,589, 0,1366,2662, +,+,+, 252926 LTR ERVL 1002 chr2 54755781 54756395 CR1-D2 538 + 54755781 54756395 0 2 317,111, 0,503, +,+, 252937 LINE CR1 1002 chr2 54763578 54764673 CR1-C4 496 + 54763578 54764673 0 2 902,193, 0,902, +,+, 252945 LINE CR1 1003 chr2 54789018 54789570 GGLTR5B 162 - 54789018 54789570 0 2 271,246, 0,306, -,-, 252976 LTR ERVL 1003 chr2 54793544 54796250 CR1-C2 517 - 54793544 54796250 0 3 530,78,406, 0,2222,2300, -,-,-, 252982 LINE CR1 1003 chr2 54799201 54801035 CR1-C4 404 + 54799201 54801035 0 2 508,492, 0,1342, +,+, 252985 LINE CR1 1003 chr2 54800080 54800289 Char12Mar1_GG 763 - 54800080 54800289 0 2 169,38, 0,171, -,-, 252988 DNA hAT-Charlie 1003 chr2 54801036 54802508 ENS3-int 411 + 54801036 54802508 0 2 710,233, 0,1239, +,+, 252991 LTR ERVL 1003 chr2 54803634 54804136 CR1-F2 412 - 54803634 54804136 0 2 338,164, 0,338, -,-, 252995 LINE CR1 1003 chr2 54812053 54813550 CR1-F2 893 + 54812053 54813550 0 2 399,234, 0,1263, +,+, 253003 LINE CR1 1003 chr2 54818031 54819462 CR1-C4 585 - 54818031 54819462 0 2 138,339, 0,1092, -,-, 253007 LINE CR1 1003 chr2 54822843 54823983 GGERVL-B-int 372 - 54822843 54823983 0 2 832,288, 0,852, -,-, 253012 LTR ERVL 1003 chr2 54824459 54825253 GGERVL-B-int 358 - 54824459 54825253 0 2 351,431, 0,363, -,-, 253016 LTR ERVL 1003 chr2 54825372 54826184 GGERVL-C-int 154 - 54825372 54826184 0 2 225,446, 0,366, -,-, 253017 LTR ERVL 1003 chr2 54832817 54833665 CR1-D2 661 + 54832817 54833665 0 2 144,700, 0,148, +,+, 253031 LINE CR1 1003 chr2 54842449 54842860 CR1-F0 339 + 54842449 54842860 0 2 27,368, 0,43, +,+, 253045 LINE CR1 1003 chr2 54859137 54859678 GGLTR11-int 449 - 54859137 54859678 0 2 181,63, 0,478, -,-, 253061 LTR ERV1 1003 chr2 54905832 54906629 GGERVL-B-int 526 + 54905832 54906629 0 2 693,70, 0,727, +,+, 253110 LTR ERVL 1003 chr2 54907535 54907731 GGLTR5B 616 + 54907535 54907731 0 2 107,89, 0,107, +,+, 253112 LTR ERVL 125 chr2 54918899 54932863 Char12Mar1_GG 550 - 54918899 54932863 0 2 455,163, 0,13801, -,-, 253118 DNA hAT-Charlie 1004 chr2 54921697 54925476 GGLTR5B 445 - 54921697 54925476 0 4 177,79,105,132, 0,1447,1610,3647, -,-,-,-, 253121 LTR ERVL 1004 chr2 54925836 54926362 GGERVL-C-int 323 - 54925836 54926362 0 2 180,346, 0,180, -,-, 253125 LTR ERVL 1004 chr2 54928024 54929396 CR1-X2 487 + 54928024 54929396 0 2 222,1101, 0,271, +,+, 253128 LINE CR1 1004 chr2 54934012 54935848 CR1-C4 493 - 54934012 54935848 0 2 683,1151, 0,685, -,-, 253133 LINE CR1 1004 chr2 54945976 54947819 CR1-E 715 - 54945976 54947819 0 3 703,471,285, 0,703,1558, -,-,-, 253140 LINE CR1 1004 chr2 54953164 54953881 GGLTR11-int 491 + 54953164 54953881 0 2 124,228, 0,489, +,+, 253146 LTR ERV1 1004 chr2 54954519 54955294 ENS1B-LTR 196 - 54954519 54955294 0 2 418,310, 0,465, -,-, 253148 LTR ERVL 1004 chr2 54960250 54963882 CR1-E 400 + 54960250 54963882 0 3 698,87,579, 0,1357,3053, +,+,+, 253154 LINE CR1 1004 chr2 54981974 54983200 CR1-C2 821 + 54981974 54983200 0 2 90,403, 0,823, +,+, 253171 LINE CR1 1004 chr2 55006705 55007276 CR1-Y2_Aves 282 + 55006705 55007276 0 2 130,404, 0,167, +,+, 253191 LINE CR1 1004 chr2 55011962 55014210 CR1-C3 738 - 55011962 55014210 0 3 897,803,68, 0,1072,2180, -,-,-, 253193 LINE CR1 1004 chr2 55024771 55028860 CR1-F 746 + 55024771 55028860 0 2 790,3299, 0,790, +,+, 253205 LINE CR1 1004 chr2 55039076 55040806 CR1-E 756 - 55039076 55040806 0 2 692,1038, 0,692, -,-, 253213 LINE CR1 1004 chr2 55042105 55043032 Mariner1_GG 595 - 55042105 55043032 0 2 478,449, 0,478, -,-, 253215 DNA TcMar-Mariner 1005 chr2 55050817 55051059 CR1-X2 439 - 55050817 55051059 0 2 88,133, 0,109, -,-, 253227 LINE CR1 1005 chr2 55079486 55080327 CR1-C4 595 - 55079486 55080327 0 2 267,208, 0,633, -,-, 253246 LINE CR1 1005 chr2 55083294 55085177 CR1-E 679 + 55083294 55085177 0 3 132,962,789, 0,132,1094, +,+,+, 253250 LINE CR1 1005 chr2 55096850 55096951 (TTTTTT)n 364 + 55096850 55096951 0 2 7,71, 0,30, +,+, 253264 Simple_repeat Simple_repeat 1005 chr2 55136946 55138870 ENS3-int 411 + 55136946 55138870 0 4 306,299,107,836, 0,310,873,1088, +,+,+,+, 253299 LTR ERVL 1005 chr2 55137427 55137721 GGLTR11-int 378 + 55137427 55137721 0 2 167,107, 0,187, +,+, 253300 LTR ERV1 1005 chr2 55151581 55151909 GGERV10_LTR 666 - 55151581 55151909 0 2 160,75, 0,253, -,-, 253318 LTR ERVL 1005 chr2 55160180 55161794 CR1-Y2_Aves 160 + 55160180 55161794 0 2 169,468, 0,1146, +,+, 253329 LINE CR1 1005 chr2 55166395 55166791 GGLTR8A 331 + 55166395 55166791 0 2 114,212, 0,184, +,+, 253334 LTR ERVL 1005 chr2 55169318 55174208 GGERVL-A-int 435 - 55169318 55174208 0 3 3674,808,103, 0,3979,4787, -,-,-, 253336 LTR ERVL 1005 chr2 55174427 55177312 GGERV20_I-int 413 + 55174427 55177312 0 3 319,808,1026, 0,430,1859, +,+,+, 253339 LTR ERVL 1006 chr2 55182837 55184596 CR1-F2 514 + 55182837 55184596 0 2 422,555, 0,1204, +,+, 253349 LINE CR1 1006 chr2 55199332 55201620 GGLTR3C2 530 + 55199332 55201620 0 2 464,162, 0,2126, +,+, 253368 LTR ERVL 1006 chr2 55214608 55215364 CR1-C2 797 + 55214608 55215364 0 2 462,293, 0,463, +,+, 253386 LINE CR1 1006 chr2 55217087 55218094 CR1-F2 417 - 55217087 55218094 0 2 403,604, 0,403, -,-, 253388 LINE CR1 1006 chr2 55243909 55243991 A-rich 328 + 55243909 55243991 0 2 16,30, 0,52, +,+, 253403 Low_complexity Low_complexity 1006 chr2 55249416 55251563 CR1-H 489 + 55249416 55251563 0 2 1788,328, 0,1819, +,+, 253411 LINE CR1 1006 chr2 55260265 55261887 CR1-X2 268 - 55260265 55261887 0 3 177,680,284, 0,218,1338, -,-,-, 253423 LINE CR1 1006 chr2 55261161 55261576 CR1-D2 605 - 55261161 55261576 0 2 69,122, 0,293, -,-, 253425 LINE CR1 1006 chr2 55265972 55266626 Charlie12_GG 501 - 55265972 55266626 0 3 197,158,267, 0,225,387, -,-,-, 253431 DNA hAT-Charlie 1006 chr2 55280150 55281308 CR1-Y2_Aves 239 + 55280150 55281308 0 2 72,480, 0,678, +,+, 253443 LINE CR1 1006 chr2 55282627 55284041 GGLTR8B 426 - 55282627 55284041 0 2 747,243, 0,1171, -,-, 253447 LTR ERVL 1006 chr2 55292080 55295543 CR1-D2 566 + 55292080 55295543 0 2 118,912, 0,2551, +,+, 253454 LINE CR1 1006 chr2 55292192 55294591 CR1-D 695 + 55292192 55294591 0 2 1802,597, 0,1802, +,+, 253455 LINE CR1 1007 chr2 55320867 55322311 CR1-X2 472 - 55320867 55322311 0 2 487,957, 0,487, -,-, 253474 LINE CR1 1007 chr2 55323780 55326612 GGERVL-C-int 409 + 55323780 55326612 0 2 2366,466, 0,2366, +,+, 253476 LTR ERVL 1007 chr2 55328795 55334496 CR1-Y4 406 + 55328795 55334496 0 3 172,877,604, 0,3489,5097, +,+,+, 253479 LINE CR1 1007 chr2 55328963 55331476 CR1-D 679 - 55328963 55331476 0 3 1312,532,669, 0,1312,1844, -,-,-, 253480 LINE CR1 1007 chr2 55336987 55339096 CR1-F2 384 + 55336987 55339096 0 2 1449,660, 0,1449, +,+, 253486 LINE CR1 1007 chr2 55350763 55353066 Charlie12_GG 522 - 55350763 55353066 0 3 609,156,432, 0,623,1871, -,-,-, 253494 DNA hAT-Charlie 1007 chr2 55365816 55368158 CR1-C4 557 + 55365816 55368158 0 4 440,331,550,198, 0,441,1594,2144, +,+,+,+, 253512 LINE CR1 1007 chr2 55368590 55370149 CR1-C3 325 + 55368590 55370149 0 2 1155,402, 0,1157, +,+, 253516 LINE CR1 1007 chr2 55372344 55373066 GGLTR5B 542 - 55372344 55373066 0 2 396,140, 0,582, -,-, 253518 LTR ERVL 1007 chr2 55423061 55425674 CR1-C4 559 + 55423061 55425674 0 2 1265,311, 0,2302, +,+, 253555 LINE CR1 1007 chr2 55429246 55429550 CR1-F2 582 + 55429246 55429550 0 2 180,115, 0,189, +,+, 253563 LINE CR1 1008 chr2 55459074 55462098 CR1-F 314 - 55459074 55462098 0 2 636,518, 0,2506, -,-, 253595 LINE CR1 1008 chr2 55487581 55489457 CR1-Y1_Aves 364 - 55487581 55489457 0 2 424,524, 0,1352, -,-, 253617 LINE CR1 1008 chr2 55494286 55496085 CR1-C2 815 - 55494286 55496085 0 2 219,476, 0,1323, -,-, 253622 LINE CR1 1008 chr2 55494683 55495614 CR1-F2 719 + 55494683 55495614 0 2 64,57, 0,874, +,+, 253623 LINE CR1 1008 chr2 55497450 55499481 CR1-F2 409 - 55497450 55499481 0 3 260,824,299, 0,852,1732, -,-,-, 253625 LINE CR1 1008 chr2 55530453 55530794 GGERVK1-int 405 + 55530453 55530794 0 2 109,59, 0,282, +,+, 253653 LTR ERVK 1008 chr2 55531701 55532115 CR1-X2 249 - 55531701 55532115 0 2 247,167, 0,247, -,-, 253654 LINE CR1 1008 chr2 55545962 55546567 CR1-Y1_Aves 491 - 55545962 55546567 0 2 547,58, 0,547, -,-, 253667 LINE CR1 1008 chr2 55549675 55555721 CR1-F2 581 - 55549675 55555721 0 2 371,685, 0,5361, -,-, 253670 LINE CR1 1008 chr2 55550011 55550504 CR1-F2 453 - 55550011 55550504 0 2 287,184, 0,309, -,-, 253671 LINE CR1 1009 chr2 55588612 55590597 CR1-F2 507 - 55588612 55590597 0 2 514,1396, 0,589, -,-, 253702 LINE CR1 1009 chr2 55609817 55611409 GGERVL18-int 518 - 55609817 55611409 0 2 286,1306, 0,286, -,-, 253727 LTR ERVL 1009 chr2 55617048 55623460 CR1-C3 601 - 55617048 55623460 0 2 287,982, 0,5430, -,-, 253733 LINE CR1 1009 chr2 55617432 55618292 GGLTR3D 607 - 55617432 55618292 0 2 408,452, 0,408, -,-, 253735 LTR ERVL 1009 chr2 55618869 55622361 GGERVL-C-int 737 - 55618869 55622361 0 3 565,857,2070, 0,565,1422, -,-,-, 253737 LTR ERVL 1009 chr2 55629660 55635022 GGERVL18-int 363 - 55629660 55635022 0 5 104,98,1234,862,1090, 0,104,1340,3027,4272, -,-,-,-,-, 253743 LTR ERVL 1009 chr2 55639435 55640274 Mariner1_GG 501 - 55639435 55640274 0 2 380,456, 0,383, -,-, 253751 DNA TcMar-Mariner 1009 chr2 55650835 55653018 CR1-E 319 - 55650835 55653018 0 2 1701,470, 0,1713, -,-, 253758 LINE CR1 1009 chr2 55665973 55668510 CR1-H 662 - 55665973 55668510 0 3 100,178,2105, 0,254,432, -,-,-, 253767 LINE CR1 1009 chr2 55678134 55678650 GGLTR5A 115 + 55678134 55678650 0 2 195,155, 0,361, +,+, 253782 LTR ERVL 1009 chr2 55683750 55684153 CR1-C 836 + 55683750 55684153 0 2 44,329, 0,74, +,+, 253787 LINE CR1 1009 chr2 55694442 55695586 CR1-F 378 - 55694442 55695586 0 2 1095,47, 0,1097, -,-, 253794 LINE CR1 1010 chr2 55706323 55706698 GGLTR5B 662 - 55706323 55706698 0 2 173,129, 0,246, -,-, 253809 LTR ERVL 1010 chr2 55706888 55707343 (TTAGGG)n 350 + 55706888 55707343 0 2 190,238, 0,217, +,+, 253812 Simple_repeat Simple_repeat 1010 chr2 55723785 55724906 CR1-C2 143 + 55723785 55724906 0 3 280,200,259, 0,469,862, +,+,+, 253830 LINE CR1 1010 chr2 55746153 55747165 GGLTR8B 153 - 55746153 55747165 0 2 791,193, 0,819, -,-, 253845 LTR ERVL 1010 chr2 55762670 55763993 CR1-C4 556 - 55762670 55763993 0 2 360,962, 0,361, -,-, 253858 LINE CR1 1010 chr2 55768209 55768673 CR1-F2 500 + 55768209 55768673 0 2 256,208, 0,256, +,+, 253864 LINE CR1 1010 chr2 55786183 55790637 GGLTR5B 239 + 55786183 55790637 0 2 134,160, 0,4294, +,+, 253881 LTR ERVL 1010 chr2 55792567 55793414 CR1-C4 540 - 55792567 55793414 0 2 281,57, 0,790, -,-, 253884 LINE CR1 1010 chr2 55818608 55822068 CR1-B2 170 + 55818608 55822068 0 3 460,839,217, 0,2351,3243, +,+,+, 253901 LINE CR1 1011 chr2 55838603 55840721 CR1-H 739 + 55838603 55840721 0 2 1597,414, 0,1704, +,+, 253917 LINE CR1 1011 chr2 55856372 55856935 TguLTR5e 366 - 55856372 55856935 0 3 120,105,132, 0,241,431, -,-,-, 253930 LTR ERVL 1011 chr2 55862342 55862978 TguLTR5e 340 - 55862342 55862978 0 3 196,105,129, 0,317,507, -,-,-, 253936 LTR ERVL 1011 chr2 55872317 55873208 CR1-E 628 - 55872317 55873208 0 2 171,714, 0,177, -,-, 253947 LINE CR1 1011 chr2 55874229 55882041 GGLTR10C1 889 - 55874229 55882041 0 3 365,7096,351, 0,365,7461, -,-,-, 253948 LTR ERVK 1011 chr2 55902395 55903703 CR1-Y1_Aves 440 + 55902395 55903703 0 2 67,706, 0,602, +,+, 253964 LINE CR1 1011 chr2 55935947 55939544 CR1-F 616 - 55935947 55939544 0 2 1460,285, 0,3312, -,-, 253987 LINE CR1 1011 chr2 55937407 55939205 CR1-C 802 - 55937407 55939205 0 2 613,944, 0,854, -,-, 253988 LINE CR1 1011 chr2 55960004 55960510 GGLTR5A 400 + 55960004 55960510 0 2 273,145, 0,361, +,+, 254009 LTR ERVL 126 chr2 55967361 55972401 Char12Mar1_GG 623 - 55967361 55972401 0 2 204,47, 0,4993, -,-, 254018 DNA hAT-Charlie 1012 chr2 55978667 55979510 TguLTR5e 481 - 55978667 55979510 0 2 470,99, 0,744, -,-, 254026 LTR ERVL 1012 chr2 56002353 56004152 Mariner1b_GG 528 - 56002353 56004152 0 2 428,55, 0,1744, -,-, 254048 DNA TcMar-Mariner 1012 chr2 56017197 56018155 CR1-F2 450 - 56017197 56018155 0 2 840,118, 0,840, -,-, 254062 LINE CR1 1012 chr2 56018608 56019088 CR1-X 316 - 56018608 56019088 0 2 182,256, 0,224, -,-, 254065 LINE CR1 1012 chr2 56031863 56033735 GGLTR11-int 561 + 56031863 56033735 0 2 96,1772, 0,100, +,+, 254076 LTR ERV1 1012 chr2 56059882 56060097 CR1-H2 612 + 56059882 56060097 0 2 149,66, 0,149, +,+, 254099 LINE CR1 1012 chr2 56080037 56080713 GGLTR3B4 572 - 56080037 56080713 0 2 198,386, 0,290, -,-, 254110 LTR ERVL 1013 chr2 56134855 56135372 CR1-X2 543 - 56134855 56135372 0 2 50,467, 0,50, -,-, 254147 LINE CR1 1013 chr2 56135376 56135733 GGLTR5A 284 + 56135376 56135733 0 2 112,188, 0,169, +,+, 254148 LTR ERVL 1013 chr2 56141575 56141891 CR1-X2 216 - 56141575 56141891 0 2 219,87, 0,229, -,-, 254149 LINE CR1 1013 chr2 56157449 56157520 (ATTTTGT)n 330 + 56157449 56157520 0 2 32,9, 0,62, +,+, 254164 Simple_repeat Simple_repeat 1014 chr2 56255616 56256943 CR1-Y2_Aves 342 + 56255616 56256943 0 2 306,984, 0,343, +,+, 254233 LINE CR1 1014 chr2 56257353 56258044 GGLTR5B 365 + 56257353 56258044 0 2 371,143, 0,548, +,+, 254234 LTR ERVL 1014 chr2 56303167 56303477 Charlie12_GGa 484 - 56303167 56303477 0 2 141,166, 0,144, -,-, 254262 DNA hAT-Charlie 1014 chr2 56314695 56321518 Char12Mar1_GG 545 - 56314695 56321518 0 2 112,166, 0,6657, -,-, 254270 DNA hAT-Charlie 126 chr2 56359641 56363213 CR1-X2 584 + 56359641 56363213 0 3 307,1721,216, 0,1215,3356, +,+,+, 254300 LINE CR1 1015 chr2 56374178 56374505 GGERV10_LTR 616 - 56374178 56374505 0 2 154,86, 0,241, -,-, 254311 LTR ERVL 1015 chr2 56424316 56425414 CR1-F2 601 + 56424316 56425414 0 2 710,388, 0,710, +,+, 254343 LINE CR1 1015 chr2 56472982 56477234 CR1-Y2_Aves 253 + 56472982 56477234 0 2 1032,1201, 0,3051, +,+, 254377 LINE CR1 126 chr2 56483556 56492363 CR1-C4 551 - 56483556 56492363 0 2 536,1503, 0,7304, -,-, 254387 LINE CR1 1015 chr2 56485507 56489170 CR1-Y3 508 + 56485507 56489170 0 2 120,3488, 0,175, +,+, 254388 LINE CR1 1016 chr2 56492425 56493372 CR1-Y4 463 - 56492425 56493372 0 3 405,389,153, 0,405,794, -,-,-, 254390 LINE CR1 1016 chr2 56495973 56499998 CR1-D2 645 - 56495973 56499998 0 3 712,242,55, 0,1015,3970, -,-,-, 254392 LINE CR1 1016 chr2 56503162 56504206 CR1-X2 574 - 56503162 56504206 0 2 213,418, 0,626, -,-, 254405 LINE CR1 1016 chr2 56571311 56573615 CR1-C4 619 + 56571311 56573615 0 2 571,845, 0,1459, +,+, 254444 LINE CR1 1016 chr2 56616405 56617072 CR1-C4 597 - 56616405 56617072 0 2 208,400, 0,267, -,-, 254467 LINE CR1 1016 chr2 56619536 56620251 Mariner1b_GG 611 - 56619536 56620251 0 3 268,61,52, 0,270,663, -,-,-, 254471 DNA TcMar-Mariner 1017 chr2 56689555 56690702 CR1-X2 615 - 56689555 56690702 0 2 621,526, 0,621, -,-, 254513 LINE CR1 1017 chr2 56713739 56715249 CR1-F2 366 - 56713739 56715249 0 2 279,1224, 0,286, -,-, 254528 LINE CR1 1018 chr2 56845670 56846127 CR1-C4 681 + 56845670 56846127 0 2 207,250, 0,207, +,+, 254594 LINE CR1 1018 chr2 56869676 56869814 (GCC)n 452 + 56869676 56869814 0 2 20,7, 0,131, +,+, 254619 Simple_repeat Simple_repeat 1019 chr2 56951119 56962104 Char12Mar1_GG 558 - 56951119 56962104 0 2 546,911, 0,10074, -,-, 254659 DNA hAT-Charlie 1019 chr2 57001750 57003111 CR1-D2 418 - 57001750 57003111 0 2 127,1234, 0,127, -,-, 254689 LINE CR1 1019 chr2 57007435 57009280 CR1-C3 654 - 57007435 57009280 0 2 161,1566, 0,279, -,-, 254692 LINE CR1 127 chr2 57015077 57017237 CR1-D2 637 - 57015077 57017237 0 2 56,1524, 0,636, -,-, 254699 LINE CR1 1020 chr2 57030758 57032422 GGLTR8B 211 + 57030758 57032422 0 2 692,128, 0,1536, +,+, 254707 LTR ERVL 1020 chr2 57077897 57078872 GGERVL-B-int 484 - 57077897 57078872 0 2 110,194, 0,781, -,-, 254730 LTR ERVL 1020 chr2 57078026 57078662 CR1-F2 477 - 57078026 57078662 0 2 353,260, 0,376, -,-, 254731 LINE CR1 1020 chr2 57082625 57083393 CR1-F2 547 - 57082625 57083393 0 2 191,576, 0,192, -,-, 254733 LINE CR1 1020 chr2 57089812 57090686 GGERVL-C-int 249 + 57089812 57090686 0 2 345,274, 0,600, +,+, 254739 LTR ERVL 1022 chr2 57357284 57358320 CR1-D2 587 + 57357284 57358320 0 3 562,233,59, 0,562,977, +,+,+, 254955 LINE CR1 1022 chr2 57364669 57366374 CR1-X2 473 - 57364669 57366374 0 2 451,1254, 0,451, -,-, 254962 LINE CR1 1022 chr2 57396919 57397908 CR1-Y4 607 + 57396919 57397908 0 3 509,163,290, 0,509,699, +,+,+, 254988 LINE CR1 1022 chr2 57398868 57401811 CR1-D2 663 + 57398868 57401811 0 2 862,91, 0,2852, +,+, 254990 LINE CR1 1023 chr2 57421511 57422005 CR1-Y1_Aves 435 - 57421511 57422005 0 2 318,159, 0,335, -,-, 255010 LINE CR1 1023 chr2 57423091 57423305 GGLTR5B 475 - 57423091 57423305 0 2 63,151, 0,63, -,-, 255011 LTR ERVL 1023 chr2 57459508 57460345 GGLTR8B 524 - 57459508 57460345 0 2 771,66, 0,771, -,-, 255050 LTR ERVL 1023 chr2 57465524 57466634 CR1-D2 603 - 57465524 57466634 0 2 795,315, 0,795, -,-, 255060 LINE CR1 1023 chr2 57467806 57468359 GGLTR3A 658 + 57467806 57468359 0 2 439,87, 0,466, +,+, 255061 LTR ERVL 1023 chr2 57514709 57517125 CR1-D 694 - 57514709 57517125 0 2 1106,1310, 0,1106, -,-, 255099 LINE CR1 1023 chr2 57519738 57519940 Eulor11 438 - 57519738 57519940 0 2 147,55, 0,147, -,-, 255103 DNA DNA 1023 chr2 57526748 57528013 CR1-D 686 + 57526748 57528013 0 2 116,1145, 0,120, +,+, 255113 LINE CR1 1023 chr2 57528006 57528887 Mariner1_GG 512 - 57528006 57528887 0 2 472,405, 0,476, -,-, 255114 DNA TcMar-Mariner 1024 chr2 57610516 57612787 CR1-D2 593 - 57610516 57612787 0 2 1076,330, 0,1941, -,-, 255182 LINE CR1 1024 chr2 57617517 57617587 (TTTA)n 444 + 57617517 57617587 0 2 6,7, 0,63, +,+, 255186 Simple_repeat Simple_repeat 1024 chr2 57647203 57648408 CR1-F2 837 + 57647203 57648408 0 2 487,349, 0,856, +,+, 255214 LINE CR1 1025 chr2 57678106 57678171 (TTT)n 394 + 57678106 57678171 0 2 9,15, 0,50, +,+, 255236 Simple_repeat Simple_repeat 1025 chr2 57683448 57683523 (T)n 903 + 57683448 57683523 0 2 24,22, 0,53, +,+, 255245 Simple_repeat Simple_repeat 1025 chr2 57740288 57740900 GGLTR8B 592 + 57740288 57740900 0 2 384,88, 0,524, +,+, 255278 LTR ERVL 1025 chr2 57769597 57770613 CR1-E 393 + 57769597 57770613 0 2 239,333, 0,683, +,+, 255299 LINE CR1 1026 chr2 57809087 57812521 CR1-E 644 + 57809087 57812521 0 2 821,1585, 0,1849, +,+, 255329 LINE CR1 1026 chr2 57835487 57837413 CR1-C4 508 + 57835487 57837413 0 2 279,213, 0,1713, +,+, 255339 LINE CR1 1026 chr2 57878740 57878827 (AAAAC)n 876 + 57878740 57878827 0 2 26,35, 0,52, +,+, 255374 Simple_repeat Simple_repeat 1026 chr2 57898074 57903805 CR1-D 657 - 57898074 57903805 0 2 261,451, 0,5280, -,-, 255387 LINE CR1 1027 chr2 57955254 57957376 CR1-D2 671 - 57955254 57957376 0 2 120,1926, 0,196, -,-, 255431 LINE CR1 1027 chr2 57961710 57962810 CR1-X2 511 - 57961710 57962810 0 3 190,86,754, 0,190,346, -,-,-, 255433 LINE CR1 1027 chr2 57973551 57973814 CR1-Y1_Aves 341 + 57973551 57973814 0 2 127,92, 0,171, +,+, 255444 LINE CR1 1027 chr2 57994514 57995004 CR1-Y1_Aves 480 + 57994514 57995004 0 2 174,316, 0,174, +,+, 255459 LINE CR1 1027 chr2 58004021 58004674 CR1-Y4 516 - 58004021 58004674 0 2 353,300, 0,353, -,-, 255464 LINE CR1 1027 chr2 58010243 58011805 CR1-C4 559 - 58010243 58011805 0 2 358,1200, 0,362, -,-, 255469 LINE CR1 1028 chr2 58157583 58158948 Char12Mar1_GG 512 - 58157583 58158948 0 3 92,106,518, 0,121,847, -,-,-, 255560 DNA hAT-Charlie 1028 chr2 58180554 58180755 CR1-Y1_Aves 455 + 58180554 58180755 0 2 121,75, 0,126, +,+, 255580 LINE CR1 1029 chr2 58199877 58204066 CR1-C2 675 - 58199877 58204066 0 3 604,67,686, 0,604,3503, -,-,-, 255595 LINE CR1 1029 chr2 58210675 58212518 Mariner1_GG 630 - 58210675 58212518 0 2 280,1044, 0,799, -,-, 255610 DNA TcMar-Mariner 1029 chr2 58262326 58262803 CR1-E 392 - 58262326 58262803 0 2 148,329, 0,148, -,-, 255647 LINE CR1 1029 chr2 58266073 58267844 CR1-C4 581 - 58266073 58267844 0 2 54,1717, 0,54, -,-, 255651 LINE CR1 1029 chr2 58323917 58324248 CR1-D2 509 + 58323917 58324248 0 2 122,209, 0,122, +,+, 255685 LINE CR1 1030 chr2 58344112 58344707 CR1-D2 580 + 58344112 58344707 0 2 271,323, 0,272, +,+, 255709 LINE CR1 1030 chr2 58349039 58349605 GGLTR5A 438 - 58349039 58349605 0 2 104,312, 0,254, -,-, 255713 LTR ERVL 1030 chr2 58371477 58372650 CR1-F2 668 + 58371477 58372650 0 2 623,550, 0,623, +,+, 255725 LINE CR1 1030 chr2 58381378 58381815 CR1-X 621 + 58381378 58381815 0 2 148,249, 0,188, +,+, 255730 LINE CR1 1030 chr2 58395271 58398176 CR1-X2 208 - 58395271 58398176 0 4 90,35,1026,767, 0,525,939,2138, -,-,-,-, 255739 LINE CR1 1030 chr2 58451951 58454357 CR1-C4 589 - 58451951 58454357 0 2 83,2321, 0,85, -,-, 255781 LINE CR1 1031 chr2 58466237 58466886 GGLTR8B 592 + 58466237 58466886 0 2 212,367, 0,282, +,+, 255790 LTR ERVL 1031 chr2 58487328 58489490 CR1-X2 463 - 58487328 58489490 0 2 471,201, 0,1961, -,-, 255806 LINE CR1 1031 chr2 58500441 58502450 CR1-X2 426 + 58500441 58502450 0 2 362,490, 0,1519, +,+, 255811 LINE CR1 1031 chr2 58535412 58536086 CR1-C3 677 - 58535412 58536086 0 2 506,131, 0,543, -,-, 255836 LINE CR1 1031 chr2 58541410 58542171 CR1-C4 614 - 58541410 58542171 0 2 87,580, 0,181, -,-, 255843 LINE CR1 1031 chr2 58568797 58568867 (TTTC)n 460 + 58568797 58568867 0 2 8,14, 0,56, +,+, 255860 Simple_repeat Simple_repeat 1032 chr2 58631116 58632190 CR1-H2 825 - 58631116 58632190 0 2 320,185, 0,889, -,-, 255911 LINE CR1 1032 chr2 58654993 58655428 CR1-F2 316 - 58654993 58655428 0 2 142,290, 0,145, -,-, 255933 LINE CR1 1032 chr2 58683978 58685908 GGLTR8A 665 - 58683978 58685908 0 3 165,45,286, 0,1599,1644, -,-,-, 255952 LTR ERVL 1033 chr2 58742388 58743690 CR1-C4 655 - 58742388 58743690 0 2 236,1065, 0,237, -,-, 256002 LINE CR1 1033 chr2 58762109 58763618 CR1-X2 557 - 58762109 58763618 0 2 887,74, 0,1435, -,-, 256014 LINE CR1 1033 chr2 58783224 58783419 (CCCTT)n 478 + 58783224 58783419 0 2 24,52, 0,143, +,+, 256034 Simple_repeat Simple_repeat 1034 chr2 58938861 58941291 CR1-D 703 - 58938861 58941291 0 2 603,342, 0,2088, -,-, 256159 LINE CR1 1034 chr2 58941299 58942182 CR1-D 693 - 58941299 58942182 0 2 599,280, 0,603, -,-, 256161 LINE CR1 1035 chr2 59076276 59077197 CR1-L3B_Croc 201 + 59076276 59077197 0 3 139,424,202, 0,241,719, +,+,+, 256258 LINE CR1 1036 chr2 59113691 59114633 CR1-11_Crp 180 + 59113691 59114633 0 2 496,162, 0,780, +,+, 256298 LINE CR1 1036 chr2 59206899 59208193 CR1-X2 469 - 59206899 59208193 0 2 103,195, 0,1099, -,-, 256355 LINE CR1 1036 chr2 59209445 59212680 GGERVL-A-int 388 - 59209445 59212680 0 3 1064,1154,311, 0,1067,2924, -,-,-, 256357 LTR ERVL 1036 chr2 59212681 59216720 GGERV21_LTR 518 + 59212681 59216720 0 3 114,195,1684, 0,2128,2355, +,+,+, 256359 LTR ERVL 1036 chr2 59212796 59213813 CR1-D 635 + 59212796 59213813 0 2 394,457, 0,560, +,+, 256360 LINE CR1 1036 chr2 59228687 59229345 GGLTR3C2 573 + 59228687 59229345 0 2 232,213, 0,445, +,+, 256378 LTR ERVL 1036 chr2 59241958 59242023 (TTC)n 312 + 59241958 59242023 0 2 10,30, 0,35, +,+, 256386 Simple_repeat Simple_repeat 1037 chr2 59253083 59253215 Mariner1b_GG 639 - 59253083 59253215 0 2 77,55, 0,77, -,-, 256394 DNA TcMar-Mariner 1037 chr2 59272795 59273826 Mariner1_GG 636 - 59272795 59273826 0 2 869,140, 0,891, -,-, 256409 DNA TcMar-Mariner 1037 chr2 59304507 59305155 CR1-Y4 553 + 59304507 59305155 0 2 509,139, 0,509, +,+, 256430 LINE CR1 1037 chr2 59346821 59347389 CR1-F 664 + 59346821 59347389 0 2 182,318, 0,250, +,+, 256454 LINE CR1 1038 chr2 59394694 59395438 CR1-Y2_Aves 88 - 59394694 59395438 0 2 386,335, 0,409, -,-, 256474 LINE CR1 1038 chr2 59447190 59448832 CR1-C4 519 - 59447190 59448832 0 2 76,548, 0,1094, -,-, 256497 LINE CR1 1038 chr2 59463479 59464249 CR1-Y2_Aves 148 + 59463479 59464249 0 2 181,584, 0,186, +,+, 256503 LINE CR1 1038 chr2 59481656 59483892 CR1-Y4 510 + 59481656 59483892 0 2 2013,223, 0,2013, +,+, 256512 LINE CR1 1039 chr2 59540199 59541803 CR1-E 312 + 59540199 59541803 0 2 1205,399, 0,1205, +,+, 256560 LINE CR1 1039 chr2 59541962 59542493 GGLTR5B 373 - 59541962 59542493 0 2 76,366, 0,165, -,-, 256562 LTR ERVL 1039 chr2 59562004 59562776 Char12Mar1_GG 509 - 59562004 59562776 0 3 517,126,122, 0,517,650, -,-,-, 256574 DNA hAT-Charlie 1039 chr2 59572179 59572944 CR1-X2 474 - 59572179 59572944 0 2 202,349, 0,416, -,-, 256583 LINE CR1 1039 chr2 59574968 59576262 CR1-Y1_Aves 304 - 59574968 59576262 0 2 565,693, 0,601, -,-, 256585 LINE CR1 1039 chr2 59592744 59593311 CR1-C4 487 + 59592744 59593311 0 2 232,335, 0,232, +,+, 256592 LINE CR1 1039 chr2 59606105 59606581 Char12Mar1_GG 676 - 59606105 59606581 0 2 56,406, 0,70, -,-, 256600 DNA hAT-Charlie 1039 chr2 59615415 59615850 TguLTR5e 428 + 59615415 59615850 0 2 174,131, 0,304, +,+, 256604 LTR ERVL 1040 chr2 59677982 59682045 CR1-H 799 - 59677982 59682045 0 2 423,330, 0,3733, -,-, 256648 LINE CR1 1040 chr2 59764220 59764860 CR1-X2 512 + 59764220 59764860 0 2 107,183, 0,457, +,+, 256678 LINE CR1 1040 chr2 59764343 59764486 CR1-F2 420 + 59764343 59764486 0 2 89,54, 0,89, +,+, 256679 LINE CR1 1040 chr2 59765793 59766303 CR1-F2 511 + 59765793 59766303 0 2 415,84, 0,426, +,+, 256683 LINE CR1 1041 chr2 59813511 59815329 CR1-C4 425 + 59813511 59815329 0 2 119,1451, 0,367, +,+, 256720 LINE CR1 1041 chr2 59819655 59820835 CR1-D 643 + 59819655 59820835 0 2 112,268, 0,912, +,+, 256724 LINE CR1 1042 chr2 59946707 59947518 Char12Mar1_GG 422 - 59946707 59947518 0 2 304,164, 0,647, -,-, 256811 DNA hAT-Charlie 1042 chr2 59965728 59966773 CR1-Y2_Aves 133 + 59965728 59966773 0 2 794,186, 0,859, +,+, 256820 LINE CR1 1043 chr2 60051624 60052403 GGLTR8B 552 - 60051624 60052403 0 4 316,96,163,86, 0,433,529,693, -,-,-,-, 256863 LTR ERVL 1043 chr2 60056117 60057408 CR1-C4 519 + 60056117 60057408 0 2 647,644, 0,647, +,+, 256868 LINE CR1 1043 chr2 60060028 60061346 CR1-X2 269 + 60060028 60061346 0 2 412,855, 0,463, +,+, 256877 LINE CR1 1043 chr2 60148855 60149086 CR1-Y3 260 - 60148855 60149086 0 2 113,47, 0,184, -,-, 256928 LINE CR1 1043 chr2 60159440 60160481 CR1-C4 542 - 60159440 60160481 0 2 144,518, 0,523, -,-, 256940 LINE CR1 1044 chr2 60180317 60181541 CR1-D2 666 - 60180317 60181541 0 2 190,1009, 0,215, -,-, 256952 LINE CR1 1044 chr2 60205609 60206486 CR1-L3A_Croc 164 - 60205609 60206486 0 2 368,153, 0,724, -,-, 256968 LINE CR1 1044 chr2 60219159 60219809 CR1-F2 628 + 60219159 60219809 0 2 595,54, 0,596, +,+, 256975 LINE CR1 1044 chr2 60281641 60283071 CR1-D 797 + 60281641 60283071 0 2 88,1342, 0,88, +,+, 257011 LINE CR1 130 chr2 60292803 60293339 CR1-D 468 - 60292803 60293339 0 2 420,116, 0,420, -,-, 257015 LINE CR1 1045 chr2 60342130 60348148 CR1-Y4 410 + 60342130 60348148 0 4 223,88,1669,530, 0,353,724,5488, +,+,+,+, 257041 LINE CR1 1046 chr2 60437699 60438688 CR1-C4 655 + 60437699 60438688 0 2 326,663, 0,326, +,+, 257084 LINE CR1 1046 chr2 60472070 60472370 CR1-C4 630 + 60472070 60472370 0 2 120,180, 0,120, +,+, 257102 LINE CR1 1046 chr2 60543818 60544506 CR1-Y2_Aves 129 + 60543818 60544506 0 2 465,140, 0,548, +,+, 257134 LINE CR1 1047 chr2 60588434 60588504 (ATTAAT)n 532 + 60588434 60588504 0 2 17,15, 0,55, +,+, 257157 Simple_repeat Simple_repeat 1047 chr2 60593769 60595093 CR1-D2 565 - 60593769 60595093 0 2 327,273, 0,1051, -,-, 257163 LINE CR1 1048 chr2 60786516 60788529 CR1-H 731 + 60786516 60788529 0 2 1123,890, 0,1123, +,+, 257261 LINE CR1 1049 chr2 60825524 60825625 (TTAA)n 352 + 60825524 60825625 0 2 16,42, 0,59, +,+, 257291 Simple_repeat Simple_repeat 1049 chr2 60831822 60834042 CR1-C2 810 + 60831822 60834042 0 2 981,238, 0,1982, +,+, 257297 LINE CR1 1049 chr2 60938517 60940048 CR1-C4 567 - 60938517 60940048 0 2 1440,91, 0,1440, -,-, 257365 LINE CR1 1050 chr2 60967970 60968797 CR1-F 429 - 60967970 60968797 0 2 659,168, 0,659, -,-, 257377 LINE CR1 1050 chr2 60977997 60979371 UCON27 388 - 60977997 60979371 0 2 173,616, 0,758, -,-, 257384 Unknown Unknown 1050 chr2 61021691 61022819 CR1-Y 707 - 61021691 61022819 0 2 683,445, 0,683, -,-, 257401 LINE CR1 1050 chr2 61075801 61076577 CR1-C3 567 + 61075801 61076577 0 2 670,98, 0,678, +,+, 257424 LINE CR1 1051 chr2 61083730 61083970 CR1-F2 587 - 61083730 61083970 0 2 135,94, 0,146, -,-, 257431 LINE CR1 1051 chr2 61136125 61136291 CR1-D 771 - 61136125 61136291 0 2 100,66, 0,100, -,-, 257456 LINE CR1 1052 chr2 61223519 61224728 CR1-F2 617 + 61223519 61224728 0 2 349,860, 0,349, +,+, 257504 LINE CR1 1052 chr2 61289311 61290790 CR1-F2 500 - 61289311 61290790 0 2 1060,56, 0,1423, -,-, 257543 LINE CR1 1054 chr2 61505108 61505969 CR1-C4 495 + 61505108 61505969 0 2 384,476, 0,385, +,+, 257636 LINE CR1 1054 chr2 61553331 61555559 GGLTR5B 598 - 61553331 61555559 0 2 192,359, 0,1869, -,-, 257663 LTR ERVL 1054 chr2 61553520 61555201 CR1-D 702 + 61553520 61555201 0 2 491,373, 0,1308, +,+, 257664 LINE CR1 1055 chr2 61722181 61724598 CR1-Y2_Aves 368 - 61722181 61724598 0 2 318,574, 0,1843, -,-, 257740 LINE CR1 1057 chr2 61970376 61970480 (CA)n 859 + 61970376 61970480 0 2 27,38, 0,66, +,+, 257867 Simple_repeat Simple_repeat 1057 chr2 61970779 61970844 GA-rich 344 + 61970779 61970844 0 2 12,20, 0,45, +,+, 257871 Low_complexity Low_complexity 1059 chr2 62160480 62160543 (CTTT)n 326 + 62160480 62160543 0 2 10,16, 0,47, +,+, 257964 Simple_repeat Simple_repeat 1059 chr2 62182935 62184259 CR1-D2 578 - 62182935 62184259 0 2 712,612, 0,712, -,-, 257977 LINE CR1 1060 chr2 62278696 62279896 CR1-X2 291 + 62278696 62279896 0 2 1107,91, 0,1109, +,+, 258017 LINE CR1 1060 chr2 62278701 62281367 CR1-F0 324 - 62278701 62281367 0 2 18,595, 0,2071, -,-, 258018 LINE CR1 1060 chr2 62342187 62342591 CR1-X 415 + 62342187 62342591 0 2 340,64, 0,340, +,+, 258052 LINE CR1 1060 chr2 62360332 62361246 L2-1_AMi 164 - 62360332 62361246 0 2 317,184, 0,730, -,-, 258059 LINE L2 1061 chr2 62494192 62495318 CR1-Y2 638 - 62494192 62495318 0 2 80,1046, 0,80, -,-, 258124 LINE CR1 1061 chr2 62505615 62506434 CR1-F2 453 + 62505615 62506434 0 2 246,573, 0,246, +,+, 258131 LINE CR1 1062 chr2 62558552 62559599 CR1-X2 233 + 62558552 62559599 0 2 126,788, 0,259, +,+, 258157 LINE CR1 1062 chr2 62564363 62564978 Chompy-6_Croc 279 - 62564363 62564978 0 2 58,156, 0,459, -,-, 258162 DNA PIF-Harbinger 1063 chr2 62741823 62744411 CR1-E 367 - 62741823 62744411 0 2 1998,268, 0,2320, -,-, 258245 LINE CR1 1066 chr2 63054969 63055691 CR1-Y2_Aves 422 - 63054969 63055691 0 2 197,488, 0,234, -,-, 258400 LINE CR1 1066 chr2 63090688 63091254 CR1-C4 474 - 63090688 63091254 0 2 420,141, 0,425, -,-, 258420 LINE CR1 1067 chr2 63181912 63181994 G-rich 288 + 63181912 63181994 0 2 18,13, 0,69, +,+, 258461 Low_complexity Low_complexity 1067 chr2 63191145 63192001 CR1-F2 407 - 63191145 63192001 0 2 43,225, 0,631, -,-, 258473 LINE CR1 1067 chr2 63211710 63212232 CR1-Y2 461 + 63211710 63212232 0 2 418,85, 0,437, +,+, 258490 LINE CR1 1068 chr2 63347285 63347733 REP131 169 - 63347285 63347733 0 2 274,152, 0,296, -,-, 258554 DNA? DNA? 1068 chr2 63362687 63363013 CR1-C 792 - 63362687 63363013 0 2 96,230, 0,96, -,-, 258565 LINE CR1 1068 chr2 63431431 63432466 CR1-D 646 + 63431431 63432466 0 2 833,202, 0,833, +,+, 258604 LINE CR1 1069 chr2 63445510 63445978 GGLTR6 611 - 63445510 63445978 0 2 112,321, 0,147, -,-, 258610 LTR ERVL 1069 chr2 63448318 63449656 Char12Mar1_GG 573 - 63448318 63449656 0 2 295,1032, 0,306, -,-, 258611 DNA hAT-Charlie 1069 chr2 63484171 63484720 CR1-E 720 + 63484171 63484720 0 2 56,45, 0,504, +,+, 258624 LINE CR1 1070 chr2 63628951 63629658 CR1-C2 623 + 63628951 63629658 0 2 37,670, 0,37, +,+, 258735 LINE CR1 1070 chr2 63674592 63677312 Char12Mar1_GG 665 - 63674592 63677312 0 2 550,46, 0,2674, -,-, 258767 DNA hAT-Charlie 1071 chr2 63726067 63726400 CR1-F2 697 + 63726067 63726400 0 2 191,36, 0,297, +,+, 258798 LINE CR1 1071 chr2 63728765 63730257 CR1-C4 590 - 63728765 63730257 0 2 968,523, 0,969, -,-, 258802 LINE CR1 1072 chr2 63863103 63863279 CR1-D2 727 + 63863103 63863279 0 2 77,99, 0,77, +,+, 258879 LINE CR1 1072 chr2 63950154 63950424 GGLTR8B 331 + 63950154 63950424 0 2 98,81, 0,189, +,+, 258925 LTR ERVL 1073 chr2 63968763 63970098 CR1-D2 676 + 63968763 63970098 0 2 625,703, 0,632, +,+, 258944 LINE CR1 1073 chr2 64009161 64009565 CR1-D2 715 - 64009161 64009565 0 2 173,231, 0,173, -,-, 258973 LINE CR1 1073 chr2 64010597 64013896 CR1-L3B_Croc 242 - 64010597 64013896 0 2 417,99, 0,3200, -,-, 258976 LINE CR1 1073 chr2 64025304 64025495 CR1-Y4 499 + 64025304 64025495 0 2 85,106, 0,85, +,+, 258984 LINE CR1 1073 chr2 64031073 64031213 GA-rich 398 + 64031073 64031213 0 2 19,57, 0,83, +,+, 258989 Low_complexity Low_complexity 1074 chr2 64097034 64097705 REP131 161 - 64097034 64097705 0 2 317,210, 0,461, -,-, 259026 DNA? DNA? 1074 chr2 64162618 64164460 CR1-E 659 - 64162618 64164460 0 3 49,1274,70, 0,49,1772, -,-,-, 259072 LINE CR1 1074 chr2 64163941 64164390 GGLTR12C 716 - 64163941 64164390 0 2 259,178, 0,271, -,-, 259073 LTR ERVL 1074 chr2 64184287 64184687 UCON84 305 - 64184287 64184687 0 2 64,191, 0,209, -,-, 259089 Unknown Unknown 1075 chr2 64315455 64317132 Mariner1_GG 582 - 64315455 64317132 0 2 363,979, 0,698, -,-, 259156 DNA TcMar-Mariner 1076 chr2 64419587 64421022 CR1-Y2_Aves 243 - 64419587 64421022 0 2 862,573, 0,862, -,-, 259218 LINE CR1 1076 chr2 64425995 64426083 (TCTTT)n 298 + 64425995 64426083 0 2 6,28, 0,60, +,+, 259219 Simple_repeat Simple_repeat 1077 chr2 64510957 64511580 GGLTR7A 824 - 64510957 64511580 0 2 42,575, 0,48, -,-, 259265 LTR ERV1 1077 chr2 64530990 64532730 CR1-Y1_Aves 376 - 64530990 64532730 0 5 197,229,74,457,85, 0,209,1097,1198,1655, -,-,-,-,-, 259271 LINE CR1 1078 chr2 64659629 64660322 CR1-C4 539 - 64659629 64660322 0 2 82,611, 0,82, -,-, 259343 LINE CR1 1078 chr2 64695956 64698256 CR1-X1 524 + 64695956 64698256 0 2 694,678, 0,1622, +,+, 259368 LINE CR1 1078 chr2 64722394 64723184 CR1-X2 457 - 64722394 64723184 0 2 126,664, 0,126, -,-, 259391 LINE CR1 1079 chr2 64793233 64796341 CR1-F2 543 - 64793233 64796341 0 2 329,74, 0,3034, -,-, 259425 LINE CR1 1080 chr2 64961413 64961843 CR1-Y4 585 + 64961413 64961843 0 2 305,97, 0,333, +,+, 259504 LINE CR1 1081 chr2 65033610 65034169 CR1-H 837 + 65033610 65034169 0 2 448,111, 0,448, +,+, 259543 LINE CR1 1081 chr2 65101140 65102207 CR1-Y4 549 + 65101140 65102207 0 2 210,857, 0,210, +,+, 259582 LINE CR1 1082 chr2 65161100 65161514 CR1-H2 172 + 65161100 65161514 0 2 197,160, 0,254, +,+, 259602 LINE CR1 1082 chr2 65171105 65172289 CR1-D 783 - 65171105 65172289 0 2 520,664, 0,520, -,-, 259608 LINE CR1 1082 chr2 65172568 65173215 CR1-X2 606 + 65172568 65173215 0 2 470,176, 0,471, +,+, 259609 LINE CR1 1082 chr2 65186618 65187363 GGERVL-A-int 536 - 65186618 65187363 0 2 468,270, 0,475, -,-, 259619 LTR ERVL 1082 chr2 65187366 65189670 CR1-C 602 + 65187366 65189670 0 3 69,40,679, 0,69,1625, +,+,+, 259620 LINE CR1 1083 chr2 65276037 65276292 CR1-C4 564 + 65276037 65276292 0 2 83,170, 0,85, +,+, 259662 LINE CR1 1083 chr2 65349524 65349753 GA-rich 672 + 65349524 65349753 0 2 47,74, 0,155, +,+, 259724 Low_complexity Low_complexity 1084 chr2 65482178 65484321 Charlie12_GG 520 - 65482178 65484321 0 2 242,1901, 0,242, -,-, 259795 DNA hAT-Charlie 1084 chr2 65502597 65503029 CR1-C4 664 + 65502597 65503029 0 2 262,159, 0,273, +,+, 259802 LINE CR1 1085 chr2 65602787 65603377 CR1-Y2_Aves 169 + 65602787 65603377 0 2 125,185, 0,405, +,+, 259858 LINE CR1 1085 chr2 65645684 65646363 CR1-C4 532 + 65645684 65646363 0 3 250,181,236, 0,262,443, +,+,+, 259886 LINE CR1 1086 chr2 65679713 65680680 CR1-Y4 606 - 65679713 65680680 0 2 346,390, 0,577, -,-, 259915 LINE CR1 1086 chr2 65744402 65745655 CR1-C 829 + 65744402 65745655 0 2 63,1190, 0,63, +,+, 259947 LINE CR1 1086 chr2 65762457 65763005 CR1-X 610 + 65762457 65763005 0 2 458,88, 0,460, +,+, 259954 LINE CR1 1086 chr2 65778103 65779816 CR1-D 486 + 65778103 65779816 0 2 284,1424, 0,289, +,+, 259967 LINE CR1 1087 chr2 65817691 65818702 CR1-Y1_Aves 337 + 65817691 65818702 0 2 911,100, 0,911, +,+, 259990 LINE CR1 1087 chr2 65903731 65905078 CR1-Y4 549 + 65903731 65905078 0 2 918,429, 0,918, +,+, 260055 LINE CR1 1088 chr2 65932536 65936235 CR1-H 853 + 65932536 65936235 0 2 1952,1747, 0,1952, +,+, 260083 LINE CR1 1088 chr2 65939580 65940049 CR1-F 588 - 65939580 65940049 0 2 174,295, 0,174, -,-, 260087 LINE CR1 1088 chr2 65946785 65949488 CR1-E 761 - 65946785 65949488 0 2 436,472, 0,2231, -,-, 260090 LINE CR1 1088 chr2 65951685 65953507 CR1-F 568 - 65951685 65953507 0 4 132,779,309,271, 0,132,1241,1551, -,-,-,-, 260096 LINE CR1 1088 chr2 65967310 65969609 CR1-Y4 549 + 65967310 65969609 0 3 45,1710,165, 0,423,2134, +,+,+, 260102 LINE CR1 1088 chr2 66014302 66016246 CR1-D2 619 + 66014302 66016246 0 2 217,970, 0,974, +,+, 260134 LINE CR1 1088 chr2 66037316 66037946 CR1-F2 497 - 66037316 66037946 0 2 362,268, 0,362, -,-, 260143 LINE CR1 1088 chr2 66042717 66044717 Charlie12_GG 613 - 66042717 66044717 0 3 562,96,1124, 0,562,876, -,-,-, 260144 DNA hAT-Charlie 1089 chr2 66102732 66104891 CR1-H 834 + 66102732 66104891 0 2 1660,178, 0,1981, +,+, 260185 LINE CR1 1090 chr2 66271251 66271713 CR1-C4 558 + 66271251 66271713 0 2 243,210, 0,252, +,+, 260292 LINE CR1 1091 chr2 66342112 66343327 CR1-D 612 - 66342112 66343327 0 2 163,142, 0,1073, -,-, 260328 LINE CR1 1091 chr2 66387344 66387875 REP131 302 - 66387344 66387875 0 2 69,461, 0,70, -,-, 260352 DNA? DNA? 1092 chr2 66571389 66571730 CR1-F2 482 + 66571389 66571730 0 2 212,129, 0,212, +,+, 260444 LINE CR1 1092 chr2 66574093 66575666 CR1-X 419 + 66574093 66575666 0 3 145,768,274, 0,145,1299, +,+,+, 260446 LINE CR1 1093 chr2 66598463 66599773 CR1-X1 462 - 66598463 66599773 0 2 21,627, 0,683, -,-, 260464 LINE CR1 1093 chr2 66701271 66701687 GGLTR5B 560 - 66701271 66701687 0 2 181,184, 0,232, -,-, 260510 LTR ERVL 1094 chr2 66836847 66836900 GA-rich 398 + 66836847 66836900 0 2 12,17, 0,36, +,+, 260581 Low_complexity Low_complexity 1095 chr2 66848003 66848464 CR1-Y 246 - 66848003 66848464 0 2 97,171, 0,290, -,-, 260595 LINE CR1 0 chr2 67108471 67108944 CR1-11_Crp 278 - 67108471 67108944 0 2 122,143, 0,330, -,-, 260728 LINE CR1 1097 chr2 67133501 67133968 GGLTR5A 418 - 67133501 67133968 0 2 146,286, 0,181, -,-, 260748 LTR ERVL 1097 chr2 67142062 67142789 GGERVL18-LTR 750 + 67142062 67142789 0 2 590,137, 0,590, +,+, 260754 LTR ERVL 1097 chr2 67158855 67158925 (CCCCCG)n 326 + 67158855 67158925 0 2 9,16, 0,54, +,+, 260783 Simple_repeat Simple_repeat 137 chr2 67370261 67371957 Mariner1_GG 662 - 67370261 67371957 0 2 519,792, 0,904, -,-, 260921 DNA TcMar-Mariner 1099 chr2 67417430 67417900 CR1-Y2_Aves 175 + 67417430 67417900 0 2 272,162, 0,308, +,+, 260946 LINE CR1 1099 chr2 67487845 67489180 CR1-H 868 - 67487845 67489180 0 2 909,422, 0,913, -,-, 260987 LINE CR1 1100 chr2 67586650 67588066 CR1-Y2_Aves 351 + 67586650 67588066 0 2 977,306, 0,1110, +,+, 261033 LINE CR1 1101 chr2 67679889 67681299 CR1-11_Crp 247 - 67679889 67681299 0 2 81,880, 0,530, -,-, 261075 LINE CR1 1101 chr2 67708659 67709143 CR1-11_Crp 417 + 67708659 67709143 0 2 291,119, 0,365, +,+, 261094 LINE CR1 137 chr2 67763796 67764383 CR1-E 584 - 67763796 67764383 0 2 419,168, 0,419, -,-, 261115 LINE CR1 1102 chr2 67871764 67872626 Mariner1_GG 553 - 67871764 67872626 0 2 55,479, 0,383, -,-, 261167 DNA TcMar-Mariner 1102 chr2 67875488 67876603 CR1-C2 697 - 67875488 67876603 0 2 100,1015, 0,100, -,-, 261169 LINE CR1 1105 chr2 68208391 68209274 CR1-C4 655 + 68208391 68209274 0 2 487,38, 0,845, +,+, 261330 LINE CR1 1105 chr2 68211656 68214090 CR1-D2 571 + 68211656 68214090 0 2 579,421, 0,2013, +,+, 261333 LINE CR1 1106 chr2 68330555 68330686 CR1-G 667 - 68330555 68330686 0 2 11,88, 0,43, -,-, 261370 LINE CR1 1107 chr2 68449261 68449450 CR1-X2 597 - 68449261 68449450 0 2 105,84, 0,105, -,-, 261429 LINE CR1 1107 chr2 68453895 68455330 CR1-X 530 + 68453895 68455330 0 3 672,623,124, 0,672,1311, +,+,+, 261432 LINE CR1 1107 chr2 68532697 68533859 CR1-Y2_Aves 407 + 68532697 68533859 0 2 229,49, 0,1113, +,+, 261474 LINE CR1 1108 chr2 68592970 68594125 CR1-E 728 - 68592970 68594125 0 2 656,482, 0,673, -,-, 261499 LINE CR1 138 chr2 68681177 68683156 CR1-C4 475 + 68681177 68683156 0 3 117,914,946, 0,119,1033, +,+,+, 261541 LINE CR1 1109 chr2 68739435 68740203 REP131 75 - 68739435 68740203 0 2 204,215, 0,553, -,-, 261574 DNA? DNA? 1110 chr2 68820956 68829902 REP131 301 - 68820956 68829902 0 2 239,95, 0,8851, -,-, 261610 DNA? DNA? 1110 chr2 68822841 68822880 (TTTCT)n 476 + 68822841 68822880 0 2 9,13, 0,26, +,+, 261612 Simple_repeat Simple_repeat 1110 chr2 68826339 68827593 CR1-Y1_Aves 433 - 68826339 68827593 0 2 906,324, 0,930, -,-, 261616 LINE CR1 1110 chr2 68901335 68901434 (T)n 959 + 68901335 68901434 0 2 18,25, 0,74, +,+, 261659 Simple_repeat Simple_repeat 1112 chr2 69080899 69081648 Mariner1_GG 705 - 69080899 69081648 0 2 118,185, 0,564, -,-, 261760 DNA TcMar-Mariner 1113 chr2 69217658 69217853 GGLTR5B 662 + 69217658 69217853 0 2 143,38, 0,157, +,+, 261832 LTR ERVL 1113 chr2 69252287 69252396 CR1-C3 424 + 69252287 69252396 0 2 22,48, 0,61, +,+, 261854 LINE CR1 1113 chr2 69256529 69262312 GGLTR3F1 845 + 69256529 69262312 0 2 466,5316, 0,467, +,+, 261857 LTR ERVL 1113 chr2 69262312 69262842 GGLTR3F1 938 + 69262312 69262842 0 2 36,494, 0,36, +,+, 261858 LTR ERVL 1113 chr2 69266063 69266428 (TTACG)n 175 + 69266063 69266428 0 2 178,160, 0,205, +,+, 261860 Simple_repeat Simple_repeat 1113 chr2 69269337 69272691 GGLTR10B 945 + 69269337 69272691 0 3 382,2585,382, 0,384,2972, +,+,+, 261864 LTR ERVK 1114 chr2 69339230 69345056 GGERV10_LTR 993 + 69339230 69345056 0 3 220,5385,220, 0,221,5606, +,+,+, 261908 LTR ERVL 1114 chr2 69346761 69352063 Char12Mar1_GG 547 - 69346761 69352063 0 3 555,187,191, 0,4920,5111, -,-,-, 261909 DNA hAT-Charlie 1114 chr2 69392069 69392513 GGLTR5B 377 + 69392069 69392513 0 2 144,285, 0,159, +,+, 261939 LTR ERVL 1114 chr2 69416465 69416834 GGLTR5A 377 + 69416465 69416834 0 2 200,56, 0,313, +,+, 261955 LTR ERVL 1115 chr2 69565252 69565617 GGLTR4A 636 + 69565252 69565617 0 2 227,112, 0,253, +,+, 262039 LTR ERVL 1115 chr2 69569764 69571813 CR1-Y2_Aves 106 + 69569764 69571813 0 3 426,966,317, 0,766,1732, +,+,+, 262043 LINE CR1 1116 chr2 69629585 69629680 (A)n 890 + 69629585 69629680 0 2 18,8, 0,87, +,+, 262074 Simple_repeat Simple_repeat 1116 chr2 69674077 69674568 TguLTR5e 301 - 69674077 69674568 0 2 136,263, 0,228, -,-, 262106 LTR ERVL 1116 chr2 69687952 69689662 CR1-C3 722 + 69687952 69689662 0 2 146,1052, 0,658, +,+, 262114 LINE CR1 139 chr2 69726856 69731911 CR1-C3 539 + 69726856 69731911 0 2 499,338, 0,4717, +,+, 262146 LINE CR1 1116 chr2 69728744 69728843 (T)n 810 + 69728744 69728843 0 2 37,32, 0,67, +,+, 262148 Simple_repeat Simple_repeat 1117 chr2 69744387 69744785 GGLTR8B 380 + 69744387 69744785 0 2 148,237, 0,161, +,+, 262163 LTR ERVL 1117 chr2 69775347 69778203 CR1-H 845 - 69775347 69778203 0 2 879,1977, 0,879, -,-, 262183 LINE CR1 1117 chr2 69783495 69784469 CR1-Y4 540 + 69783495 69784469 0 2 761,180, 0,794, +,+, 262191 LINE CR1 1117 chr2 69791632 69794571 CR1-F2 581 - 69791632 69794571 0 2 481,905, 0,2034, -,-, 262201 LINE CR1 1117 chr2 69859794 69860989 CR1-B2 749 + 69859794 69860989 0 2 200,65, 0,1130, +,+, 262263 LINE CR1 1118 chr2 69895650 69897406 CR1-H 830 - 69895650 69897406 0 2 1377,379, 0,1377, -,-, 262304 LINE CR1 1118 chr2 69908635 69909091 CR1-F2 413 + 69908635 69909091 0 2 134,85, 0,371, +,+, 262321 LINE CR1 1118 chr2 69918596 69918837 CR1-C4 588 - 69918596 69918837 0 2 83,158, 0,83, -,-, 262328 LINE CR1 1118 chr2 69986965 69988257 CR1-C 861 + 69986965 69988257 0 2 477,278, 0,1014, +,+, 262392 LINE CR1 1118 chr2 69988266 69990153 GGERVL-A-int 494 + 69988266 69990153 0 2 1777,100, 0,1787, +,+, 262394 LTR ERVL 1119 chr2 70055758 70056281 CR1-Y2_Aves 308 - 70055758 70056281 0 2 94,347, 0,176, -,-, 262454 LINE CR1 1120 chr2 70183260 70184225 Char12Mar1_GG 615 - 70183260 70184225 0 2 413,114, 0,851, -,-, 262578 DNA hAT-Charlie 1120 chr2 70195057 70195495 GGLTR7A 651 - 70195057 70195495 0 2 325,113, 0,325, -,-, 262589 LTR ERV1 1120 chr2 70195785 70197846 CR1-C4 489 + 70195785 70197846 0 2 1544,224, 0,1837, +,+, 262591 LINE CR1 1120 chr2 70245646 70247944 Charlie12_GG 268 - 70245646 70247944 0 2 1544,721, 0,1577, -,-, 262643 DNA hAT-Charlie 1120 chr2 70248496 70249435 CR1-Y2_Aves 202 - 70248496 70249435 0 2 287,116, 0,823, -,-, 262646 LINE CR1 1121 chr2 70260503 70261487 Char12Mar1_GG 400 - 70260503 70261487 0 2 322,80, 0,904, -,-, 262660 DNA hAT-Charlie 1121 chr2 70275068 70275875 CR1-D2 616 + 70275068 70275875 0 2 115,674, 0,133, +,+, 262681 LINE CR1 1121 chr2 70319538 70321382 CR1-C4 408 + 70319538 70321382 0 2 1075,545, 0,1299, +,+, 262721 LINE CR1 1121 chr2 70326290 70327435 Mariner1_GG 556 - 70326290 70327435 0 2 145,73, 0,1072, -,-, 262727 DNA TcMar-Mariner 1121 chr2 70327779 70328965 GGLTR12C 608 + 70327779 70328965 0 3 114,40,113, 0,114,1073, +,+,+, 262730 LTR ERVL 1121 chr2 70341682 70341972 GGLTR5A 486 + 70341682 70341972 0 2 127,136, 0,154, +,+, 262741 LTR ERVL 1122 chr2 70411845 70412657 CR1-C4 567 - 70411845 70412657 0 2 521,119, 0,693, -,-, 262802 LINE CR1 1122 chr2 70412381 70412548 CR1-H2 807 + 70412381 70412548 0 2 98,69, 0,98, +,+, 262803 LINE CR1 1122 chr2 70464575 70465071 CR1-D 618 + 70464575 70465071 0 2 74,422, 0,74, +,+, 262846 LINE CR1 1122 chr2 70485824 70486242 CR1-X1 570 - 70485824 70486242 0 2 56,350, 0,68, -,-, 262854 LINE CR1 1122 chr2 70515729 70515856 A-rich 580 + 70515729 70515856 0 2 44,33, 0,94, +,+, 262888 Low_complexity Low_complexity 1123 chr2 70536201 70536388 Sat-CR1_GG 270 - 70536201 70536388 0 2 26,12, 0,175, -,-, 262909 Satellite Satellite 1123 chr2 70547584 70552957 GGLTR3A 808 + 70547584 70552957 0 4 525,3717,853,274, 0,527,4244,5099, +,+,+,+, 262923 LTR ERVL 1123 chr2 70567816 70570059 CR1-C4 652 + 70567816 70570059 0 2 1322,98, 0,2145, +,+, 262936 LINE CR1 1123 chr2 70569138 70569956 GGLTR12C 642 + 70569138 70569956 0 2 418,49, 0,769, +,+, 262937 LTR ERVL 1123 chr2 70609444 70609742 CR1-Y2 671 - 70609444 70609742 0 2 49,48, 0,250, -,-, 262966 LINE CR1 1123 chr2 70614588 70616796 CR1-E 287 + 70614588 70616796 0 2 160,543, 0,1665, +,+, 262972 LINE CR1 1123 chr2 70633482 70635388 CR1-F2 472 + 70633482 70635388 0 3 175,751,980, 0,175,926, +,+,+, 262996 LINE CR1 1124 chr2 70672805 70674478 CR1-X2 238 + 70672805 70674478 0 3 175,592,149, 0,179,1524, +,+,+, 263030 LINE CR1 1124 chr2 70680216 70681649 Mariner1_GG 480 + 70680216 70681649 0 2 583,815, 0,618, +,+, 263034 DNA TcMar-Mariner 1124 chr2 70687747 70688316 Char12Mar1_GG 486 - 70687747 70688316 0 2 96,434, 0,135, -,-, 263039 DNA hAT-Charlie 1124 chr2 70695131 70695973 GGLTR9 621 + 70695131 70695973 0 2 124,233, 0,609, +,+, 263045 LTR ERVL 1124 chr2 70711042 70711521 GGLTR12C 826 + 70711042 70711521 0 2 68,175, 0,304, +,+, 263061 LTR ERVL 1124 chr2 70721416 70724305 CR1-Y 754 + 70721416 70724305 0 2 1308,1563, 0,1326, +,+, 263081 LINE CR1 1124 chr2 70746584 70748059 CR1-Y2_Aves 367 - 70746584 70748059 0 3 79,202,92, 0,96,1383, -,-,-, 263096 LINE CR1 1124 chr2 70746904 70747964 GGLTR7A 876 - 70746904 70747964 0 2 370,200, 0,860, -,-, 263097 LTR ERV1 1124 chr2 70766523 70769019 CR1-C4 301 - 70766523 70769019 0 2 374,2122, 0,374, -,-, 263125 LINE CR1 1125 chr2 70796220 70798423 CR1-Y4 540 + 70796220 70798423 0 2 532,1671, 0,532, +,+, 263141 LINE CR1 1125 chr2 70843967 70844443 CR1-Y4 550 + 70843967 70844443 0 2 217,233, 0,243, +,+, 263190 LINE CR1 1125 chr2 70860167 70860580 CR1-C4 500 + 70860167 70860580 0 2 161,234, 0,179, +,+, 263202 LINE CR1 1125 chr2 70870727 70870976 ENS1B-LTR 678 - 70870727 70870976 0 2 149,100, 0,149, -,-, 263214 LTR ERVL 1125 chr2 70871168 70871796 GGLTR8A 557 - 70871168 70871796 0 2 308,320, 0,308, -,-, 263215 LTR ERVL 1125 chr2 70890886 70891588 CR1-E 435 + 70890886 70891588 0 3 245,145,311, 0,245,391, +,+,+, 263228 LINE CR1 1126 chr2 70931182 70932044 CR1-X1 618 - 70931182 70932044 0 2 427,90, 0,772, -,-, 263266 LINE CR1 1126 chr2 70945324 70945930 CR1-Y2_Aves 314 - 70945324 70945930 0 2 147,201, 0,405, -,-, 263283 LINE CR1 1126 chr2 70946664 70946923 CR1-X2 589 - 70946664 70946923 0 2 197,62, 0,197, -,-, 263286 LINE CR1 1126 chr2 70955358 70956758 TguLTR5e 206 + 70955358 70956758 0 2 259,249, 0,1151, +,+, 263298 LTR ERVL 1126 chr2 70977052 70977681 GGLTR8B 381 + 70977052 70977681 0 2 402,227, 0,402, +,+, 263318 LTR ERVL 1126 chr2 70983760 70984750 CR1-F2 442 - 70983760 70984750 0 2 935,55, 0,935, -,-, 263323 LINE CR1 1126 chr2 70984937 70986020 GGLTR9 358 - 70984937 70986020 0 2 192,114, 0,969, -,-, 263324 LTR ERVL 1127 chr2 71041386 71041909 TguLTR5e 251 - 71041386 71041909 0 2 134,267, 0,256, -,-, 263365 LTR ERVL 1127 chr2 71045250 71045548 GGLTR4A 612 - 71045250 71045548 0 2 175,109, 0,189, -,-, 263368 LTR ERVL 1127 chr2 71047419 71048003 GGLTR5B 290 + 71047419 71048003 0 2 29,512, 0,72, +,+, 263369 LTR ERVL 1127 chr2 71086542 71088799 CR1-B 895 - 71086542 71088799 0 2 1507,750, 0,1507, -,-, 263407 LINE CR1 1127 chr2 71134841 71134897 (GTT)n 448 + 71134841 71134897 0 2 9,18, 0,38, +,+, 263451 Simple_repeat Simple_repeat 1128 chr2 71181340 71181950 GGLTR11-int 393 + 71181340 71181950 0 2 121,230, 0,380, +,+, 263504 LTR ERV1 1128 chr2 71218689 71218825 (GTTT)n 646 + 71218689 71218825 0 2 35,52, 0,84, +,+, 263546 Simple_repeat Simple_repeat 1128 chr2 71236626 71237124 CR1-F2 635 + 71236626 71237124 0 2 228,245, 0,253, +,+, 263566 LINE CR1 1128 chr2 71298753 71300153 CR1-Y2_Aves 249 + 71298753 71300153 0 2 470,543, 0,857, +,+, 263619 LINE CR1 1129 chr2 71303798 71304788 CR1-Y2_Aves 181 + 71303798 71304788 0 3 160,168,221, 0,522,769, +,+,+, 263624 LINE CR1 1129 chr2 71323935 71327095 GGERVL18-int 678 + 71323935 71327095 0 3 340,760,1727, 0,341,1433, +,+,+, 263643 LTR ERVL 1129 chr2 71325035 71325368 GGERV10_LTR 502 + 71325035 71325368 0 2 85,160, 0,173, +,+, 263644 LTR ERVL 1129 chr2 71333912 71334029 (T)n 863 + 71333912 71334029 0 2 23,35, 0,82, +,+, 263656 Simple_repeat Simple_repeat 1129 chr2 71337207 71337734 CR1-H 829 + 71337207 71337734 0 2 155,361, 0,166, +,+, 263661 LINE CR1 1129 chr2 71340466 71342985 GGERVL-C-int 748 - 71340466 71342985 0 2 488,2031, 0,488, -,-, 263664 LTR ERVL 1129 chr2 71398731 71399037 Charlie12_GG 440 - 71398731 71399037 0 2 151,61, 0,245, -,-, 263726 DNA hAT-Charlie 1129 chr2 71400516 71401041 TguLTR5e 336 + 71400516 71401041 0 2 271,201, 0,324, +,+, 263729 LTR ERVL 1129 chr2 71423486 71424013 GGERVK10-int 582 + 71423486 71424013 0 2 151,376, 0,151, +,+, 263754 LTR ERVK 1131 chr2 71569603 71570214 Mariner1b_GG 562 - 71569603 71570214 0 2 340,210, 0,401, -,-, 263889 DNA TcMar-Mariner 1131 chr2 71597895 71599104 Mariner1_GG 548 - 71597895 71599104 0 2 845,358, 0,851, -,-, 263920 DNA TcMar-Mariner 1131 chr2 71606672 71608865 CR1-C3 596 + 71606672 71608865 0 2 1003,1190, 0,1003, +,+, 263929 LINE CR1 1131 chr2 71639506 71639569 (ATTTTT)n 528 + 71639506 71639569 0 2 17,7, 0,56, +,+, 263954 Simple_repeat Simple_repeat 1131 chr2 71645648 71646107 CR1-D2 644 + 71645648 71646107 0 2 80,358, 0,101, +,+, 263961 LINE CR1 1131 chr2 71647902 71649985 GGLTR5B 205 + 71647902 71649985 0 2 397,176, 0,1907, +,+, 263962 LTR ERVL 1131 chr2 71650425 71651508 CR1-C3 604 - 71650425 71651508 0 3 590,336,157, 0,590,926, -,-,-, 263965 LINE CR1 1131 chr2 71664838 71665839 GGLTR8B 357 + 71664838 71665839 0 3 83,105,312, 0,584,689, +,+,+, 263981 LTR ERVL 1132 chr2 71702329 71703379 CR1-F2 526 + 71702329 71703379 0 2 423,626, 0,424, +,+, 264028 LINE CR1 1132 chr2 71707001 71708517 CR1-F 512 - 71707001 71708517 0 2 1260,234, 0,1282, -,-, 264031 LINE CR1 1132 chr2 71720630 71721353 CR1-F2 450 - 71720630 71721353 0 2 669,54, 0,669, -,-, 264045 LINE CR1 1132 chr2 71753762 71754746 CR1-Y2_Aves 141 - 71753762 71754746 0 2 553,389, 0,595, -,-, 264076 LINE CR1 1132 chr2 71805489 71805570 A-rich 384 + 71805489 71805570 0 2 31,15, 0,66, +,+, 264127 Low_complexity Low_complexity 1132 chr2 71816676 71816724 (ATTTT)n 552 + 71816676 71816724 0 2 6,10, 0,38, +,+, 264138 Simple_repeat Simple_repeat 1132 chr2 71821893 71822572 CR1-F2 604 - 71821893 71822572 0 2 164,503, 0,176, -,-, 264145 LINE CR1 1133 chr2 71827793 71828283 GGLTR3F2 838 + 71827793 71828283 0 2 233,199, 0,291, +,+, 264149 LTR ERVL 1133 chr2 71861423 71861716 GGLTR5B 381 - 71861423 71861716 0 2 194,99, 0,194, -,-, 264180 LTR ERVL 1133 chr2 71889892 71890176 CR1-C4 420 + 71889892 71890176 0 3 42,179,26, 0,42,258, +,+,+, 264201 LINE CR1 1133 chr2 71918014 71918455 ENS1B-LTR 956 - 71918014 71918455 0 2 259,178, 0,263, -,-, 264225 LTR ERVL 1133 chr2 71925638 71930575 GGLTR3B1 676 + 71925638 71930575 0 2 486,4450, 0,487, +,+, 264233 LTR ERVL 1133 chr2 71955147 71955225 (AATATAT)n 330 + 71955147 71955225 0 2 22,35, 0,43, +,+, 264257 Simple_repeat Simple_repeat 1134 chr2 71979567 71980126 CR1-C3 508 + 71979567 71980126 0 2 168,373, 0,186, +,+, 264282 LINE CR1 1134 chr2 71989500 71993765 Charlie12_GG 448 - 71989500 71993765 0 4 605,193,538,679, 0,2827,3021,3586, -,-,-,-, 264294 DNA hAT-Charlie 1134 chr2 71990115 71992327 CR1-D2 720 + 71990115 71992327 0 2 842,463, 0,1749, +,+, 264295 LINE CR1 1134 chr2 72010370 72010411 (TTTCTT)n 614 + 72010370 72010411 0 2 7,10, 0,31, +,+, 264310 Simple_repeat Simple_repeat 1134 chr2 72018720 72021281 CR1-D2 614 - 72018720 72021281 0 3 161,12,31, 0,2371,2530, -,-,-, 264330 LINE CR1 1134 chr2 72054536 72057449 CR1-C4 473 + 72054536 72057449 0 2 697,1303, 0,1610, +,+, 264374 LINE CR1 1135 chr2 72095865 72097072 CR1-X 417 - 72095865 72097072 0 2 703,504, 0,703, -,-, 264427 LINE CR1 1135 chr2 72113607 72115257 CR1-B 112 - 72113607 72115257 0 2 197,120, 0,1530, -,-, 264446 LINE CR1 1135 chr2 72115296 72115878 CR1-Y2_Aves 113 - 72115296 72115878 0 2 306,194, 0,388, -,-, 264450 LINE CR1 1135 chr2 72153913 72153973 CR1-F2 939 - 72153913 72153973 0 2 29,31, 0,29, -,-, 264500 LINE CR1 1135 chr2 72156406 72156836 GGLTR5B 411 + 72156406 72156836 0 2 100,139, 0,291, +,+, 264506 LTR ERVL 1135 chr2 72157821 72163079 GGLTR7-int 492 + 72157821 72163079 0 5 72,117,78,65,608, 0,509,1905,2035,4650, +,+,+,+,+, 264510 LTR ERV1 1135 chr2 72186568 72188018 CR1-C 836 - 72186568 72188018 0 2 1339,111, 0,1339, -,-, 264542 LINE CR1 1135 chr2 72218306 72220234 CR1-Y4 549 - 72218306 72220234 0 3 296,679,459, 0,300,1469, -,-,-, 264583 LINE CR1 1136 chr2 72248696 72249400 CR1-Y3 733 - 72248696 72249400 0 2 356,348, 0,356, -,-, 264619 LINE CR1 1136 chr2 72281415 72282950 GGLTR3E1 663 + 72281415 72282950 0 2 230,327, 0,1208, +,+, 264654 LTR ERVL 1136 chr2 72281649 72282638 GGERVL-B-int 827 + 72281649 72282638 0 2 523,442, 0,547, +,+, 264655 LTR ERVL 1136 chr2 72333022 72334809 CR1-Y4 552 + 72333022 72334809 0 2 96,800, 0,987, +,+, 264710 LINE CR1 1136 chr2 72335573 72335688 (T)n 789 + 72335573 72335688 0 2 28,41, 0,74, +,+, 264712 Simple_repeat Simple_repeat 1137 chr2 72352167 72352266 (A)n 1000 + 72352167 72352266 0 2 18,29, 0,70, +,+, 264727 Simple_repeat Simple_repeat 1137 chr2 72412246 72412709 GGLTR3F2 884 - 72412246 72412709 0 2 202,230, 0,233, -,-, 264777 LTR ERVL 1137 chr2 72445959 72446932 CR1-C4 495 - 72445959 72446932 0 2 764,98, 0,875, -,-, 264811 LINE CR1 1137 chr2 72446723 72447209 CR1-C 346 - 72446723 72447209 0 2 193,293, 0,193, -,-, 264812 LINE CR1 1138 chr2 72487882 72488391 GGLTR3F2 757 + 72487882 72488391 0 3 231,118,75, 0,283,434, +,+,+, 264853 LTR ERVL 1138 chr2 72518178 72519767 Mariner1b_GG 659 - 72518178 72519767 0 3 301,36,144, 0,368,1445, -,-,-, 264885 DNA TcMar-Mariner 1138 chr2 72557985 72559910 CR1-Y4 359 + 72557985 72559910 0 2 223,204, 0,1721, +,+, 264916 LINE CR1 142 chr2 72613093 72619627 CR1-F2 318 - 72613093 72619627 0 2 107,416, 0,6118, -,-, 264961 LINE CR1 142 chr2 72613380 72619181 GGERVK1-int 982 - 72613380 72619181 0 5 241,447,2179,2693,241, 0,241,688,2867,5560, -,-,-,-,-, 264963 LTR ERVK 1139 chr2 72621719 72622665 ENS1B-LTR 565 + 72621719 72622665 0 2 114,441, 0,505, +,+, 264966 LTR ERVL 1139 chr2 72629473 72630513 CR1-C4 478 - 72629473 72630513 0 2 399,599, 0,441, -,-, 264975 LINE CR1 1139 chr2 72634662 72636383 CR1-Y2_Aves 146 + 72634662 72636383 0 2 536,773, 0,948, +,+, 264979 LINE CR1 1139 chr2 72675619 72675951 GGERV10_LTR 544 - 72675619 72675951 0 2 160,84, 0,248, -,-, 265014 LTR ERVL 1139 chr2 72676939 72677681 CR1-X1 495 - 72676939 72677681 0 2 110,280, 0,462, -,-, 265015 LINE CR1 1139 chr2 72723300 72726521 GGERVL18-int 738 - 72723300 72726521 0 2 349,2872, 0,349, -,-, 265057 LTR ERVL 1140 chr2 72770254 72780179 Mariner1_GG 681 - 72770254 72780179 0 2 181,723, 0,9202, -,-, 265089 DNA TcMar-Mariner 1140 chr2 72792989 72795613 Char12Mar1_GG 609 - 72792989 72795613 0 2 251,87, 0,2537, -,-, 265115 DNA hAT-Charlie 1140 chr2 72817032 72817625 Char12Mar1_GG 396 - 72817032 72817625 0 2 479,91, 0,502, -,-, 265140 DNA hAT-Charlie 1140 chr2 72837659 72837961 Char12Mar1_GG 592 - 72837659 72837961 0 2 125,168, 0,134, -,-, 265157 DNA hAT-Charlie 1140 chr2 72848661 72850845 CR1-H 729 + 72848661 72850845 0 2 227,1506, 0,678, +,+, 265165 LINE CR1 1141 chr2 72906705 72907111 CR1-D2 656 - 72906705 72907111 0 2 46,357, 0,49, -,-, 265205 LINE CR1 1141 chr2 72940303 72941131 CR1-E 707 + 72940303 72941131 0 2 420,408, 0,420, +,+, 265230 LINE CR1 1141 chr2 72954513 72954951 Char12Mar1_GG 653 - 72954513 72954951 0 2 142,296, 0,142, -,-, 265248 DNA hAT-Charlie 1141 chr2 72993436 72993989 CR1-Y3 526 + 72993436 72993989 0 2 159,112, 0,441, +,+, 265285 LINE CR1 1141 chr2 73006380 73006820 GGLTR5A 488 + 73006380 73006820 0 2 236,65, 0,375, +,+, 265296 LTR ERVL 1142 chr2 73024519 73025338 GGLTR8B 257 - 73024519 73025338 0 2 116,576, 0,243, -,-, 265308 LTR ERVL 1142 chr2 73065090 73067301 CR1-X1 447 - 73065090 73067301 0 3 649,895,332, 0,651,1879, -,-,-, 265344 LINE CR1 1143 chr2 73184993 73191066 CR1-C4 553 - 73184993 73191066 0 2 433,323, 0,5750, -,-, 265449 LINE CR1 1143 chr2 73188098 73190005 CR1-X 427 + 73188098 73190005 0 2 878,1029, 0,878, +,+, 265452 LINE CR1 1143 chr2 73264401 73264894 CR1-D2 544 + 73264401 73264894 0 2 277,183, 0,310, +,+, 265522 LINE CR1 1144 chr2 73272261 73274093 CR1-Y2_Aves 248 + 73272261 73274093 0 2 577,953, 0,879, +,+, 265530 LINE CR1 1144 chr2 73338759 73339078 CR1-Y1_Aves 404 + 73338759 73339078 0 2 91,192, 0,127, +,+, 265584 LINE CR1 1144 chr2 73353561 73355440 CR1-D 441 + 73353561 73355440 0 2 1023,856, 0,1023, +,+, 265595 LINE CR1 1145 chr2 73415117 73415211 CR1-D2 629 - 73415117 73415211 0 2 79,15, 0,79, -,-, 265637 LINE CR1 1145 chr2 73440567 73443515 CR1-E 687 + 73440567 73443515 0 2 1884,984, 0,1964, +,+, 265661 LINE CR1 1145 chr2 73487470 73487557 (TATT)n 384 + 73487470 73487557 0 2 30,29, 0,58, +,+, 265689 Simple_repeat Simple_repeat 1145 chr2 73507037 73508777 CR1-C4 567 + 73507037 73508777 0 2 1205,519, 0,1221, +,+, 265704 LINE CR1 1146 chr2 73532749 73535558 CR1-D 494 + 73532749 73535558 0 2 237,2572, 0,237, +,+, 265734 LINE CR1 1146 chr2 73610330 73611986 CR1-Y2_Aves 293 - 73610330 73611986 0 2 1214,442, 0,1214, -,-, 265797 LINE CR1 1146 chr2 73617573 73617623 (GCTGTT)n 472 + 73617573 73617623 0 2 9,9, 0,41, +,+, 265803 Simple_repeat Simple_repeat 1146 chr2 73617623 73624045 GGLTR3A 827 - 73617623 73624045 0 4 527,47,5280,526, 0,527,616,5896, -,-,-,-, 265805 LTR ERVL 1146 chr2 73644276 73644495 CR1-C2 792 - 73644276 73644495 0 2 115,104, 0,115, -,-, 265827 LINE CR1 1147 chr2 73674589 73674801 CR1-C2 694 - 73674589 73674801 0 2 101,111, 0,101, -,-, 265865 LINE CR1 1147 chr2 73683084 73683145 (T)n 1000 + 73683084 73683145 0 2 21,18, 0,43, +,+, 265875 Simple_repeat Simple_repeat 1147 chr2 73709208 73709606 CR1-Y2_Aves 260 + 73709208 73709606 0 2 176,187, 0,211, +,+, 265908 LINE CR1 1147 chr2 73728431 73729514 CR1-C4 454 + 73728431 73729514 0 2 733,347, 0,736, +,+, 265931 LINE CR1 1147 chr2 73740471 73741898 CR1-X2 165 + 73740471 73741898 0 2 810,617, 0,810, +,+, 265936 LINE CR1 1147 chr2 73753027 73753680 CR1-Y 466 - 73753027 73753680 0 2 251,145, 0,508, -,-, 265948 LINE CR1 1147 chr2 73778556 73780201 GGERVL-A-int 594 + 73778556 73780201 0 3 521,255,777, 0,526,868, +,+,+, 265965 LTR ERVL 1147 chr2 73781433 73781488 (ACATAT)n 468 + 73781433 73781488 0 2 10,10, 0,45, +,+, 265968 Simple_repeat Simple_repeat 1148 chr2 73795406 73796738 CR1-Y2_Aves 251 - 73795406 73796738 0 2 143,144, 0,1188, -,-, 265982 LINE CR1 1148 chr2 73841424 73843787 CR1-Y4 499 + 73841424 73843787 0 4 178,291,78,123, 0,178,469,2240, +,+,+,+, 266023 LINE CR1 1148 chr2 73857450 73857541 (TTTTC)n 392 + 73857450 73857541 0 2 29,21, 0,70, +,+, 266046 Simple_repeat Simple_repeat 1148 chr2 73863881 73868653 CR1-F 855 - 73863881 73868653 0 2 1957,1289, 0,3483, -,-, 266054 LINE CR1 1148 chr2 73911226 73912787 GGLTR3F1 890 + 73911226 73912787 0 3 1081,231,198, 0,1081,1363, +,+,+, 266095 LTR ERVL 1148 chr2 73919001 73922649 Char12Mar1_GG 615 - 73919001 73922649 0 2 542,65, 0,3583, -,-, 266101 DNA hAT-Charlie 1148 chr2 73921548 73922590 CR1-C2 770 + 73921548 73922590 0 2 510,231, 0,811, +,+, 266103 LINE CR1 1149 chr2 73925558 73926230 GGLTR11-int 432 + 73925558 73926230 0 2 115,197, 0,475, +,+, 266105 LTR ERV1 1149 chr2 73938323 73939346 CR1-Y2_Aves 369 + 73938323 73939346 0 2 852,120, 0,903, +,+, 266117 LINE CR1 1149 chr2 73943902 73945280 CR1-D2 600 - 73943902 73945280 0 2 177,582, 0,796, -,-, 266123 LINE CR1 1149 chr2 73947137 73950745 Char12Mar1_GG 476 - 73947137 73950745 0 2 526,697, 0,2911, -,-, 266126 DNA hAT-Charlie 1149 chr2 73949053 73950041 Char12Mar1_GG 569 - 73949053 73950041 0 3 107,145,123, 0,190,865, -,-,-, 266129 DNA hAT-Charlie 1149 chr2 73965398 73965879 GGLTR5A 377 + 73965398 73965879 0 2 318,120, 0,361, +,+, 266144 LTR ERVL 1149 chr2 73971320 73972128 CR1-F0 270 - 73971320 73972128 0 2 656,150, 0,658, -,-, 266151 LINE CR1 1149 chr2 74014706 74015517 CR1-F2 552 + 74014706 74015517 0 2 564,75, 0,736, +,+, 266191 LINE CR1 1150 chr2 74057208 74057805 CR1-Y2_Aves 330 - 74057208 74057805 0 2 515,70, 0,527, -,-, 266234 LINE CR1 1150 chr2 74059707 74060348 ENS1B-LTR 931 + 74059707 74060348 0 2 185,456, 0,185, +,+, 266237 LTR ERVL 1150 chr2 74064097 74065161 Char12Mar1_GG 539 - 74064097 74065161 0 2 194,332, 0,732, -,-, 266244 DNA hAT-Charlie 1150 chr2 74067658 74068994 CR1-X2 513 + 74067658 74068994 0 2 640,649, 0,687, +,+, 266249 LINE CR1 1150 chr2 74092107 74097540 GGERV10_LTR 775 - 74092107 74097540 0 3 5169,160,44, 0,5170,5389, -,-,-, 266270 LTR ERVL 1150 chr2 74101913 74107310 GGERVL18-int 601 - 74101913 74107310 0 4 336,4431,273,336, 0,336,4767,5061, -,-,-,-, 266273 LTR ERVL 1150 chr2 74132730 74132871 A-rich 511 + 74132730 74132871 0 2 38,50, 0,91, +,+, 266297 Low_complexity Low_complexity 1150 chr2 74139643 74140494 CR1-D2 490 - 74139643 74140494 0 2 510,333, 0,518, -,-, 266308 LINE CR1 1151 chr2 74199344 74199668 GGERV10_LTR 676 + 74199344 74199668 0 2 62,160, 0,164, +,+, 266370 LTR ERVL 1151 chr2 74226279 74226812 CR1-C4 620 + 74226279 74226812 0 2 332,201, 0,332, +,+, 266391 LINE CR1 1151 chr2 74237472 74237930 CR1-Y4 587 + 74237472 74237930 0 2 349,109, 0,349, +,+, 266402 LINE CR1 1151 chr2 74238231 74240878 GGERVL18-int 724 - 74238231 74240878 0 2 322,2324, 0,323, -,-, 266404 LTR ERVL 1151 chr2 74257427 74258110 CR1-Y2_Aves 72 - 74257427 74258110 0 2 367,249, 0,434, -,-, 266419 LINE CR1 1151 chr2 74258196 74258443 CR1-Y2 503 - 74258196 74258443 0 2 188,42, 0,205, -,-, 266421 LINE CR1 1151 chr2 74267090 74267263 TguLTR5e 425 - 74267090 74267263 0 2 71,99, 0,74, -,-, 266430 LTR ERVL 1151 chr2 74289207 74289380 TguLTR5e 425 - 74289207 74289380 0 2 71,99, 0,74, -,-, 266459 LTR ERVL 1151 chr2 74298944 74302787 Char12Mar1_GG 543 - 74298944 74302787 0 2 57,193, 0,3650, -,-, 266471 DNA hAT-Charlie 1152 chr2 74321807 74322162 Char12Mar1_GG 526 - 74321807 74322162 0 2 230,125, 0,230, -,-, 266500 DNA hAT-Charlie 1152 chr2 74371552 74371883 GGERV10_LTR 625 + 74371552 74371883 0 2 62,160, 0,171, +,+, 266544 LTR ERVL 1152 chr2 74399453 74400834 CR1-C 807 - 74399453 74400834 0 2 1184,197, 0,1184, -,-, 266569 LINE CR1 1152 chr2 74404687 74406004 CR1-C4 222 - 74404687 74406004 0 3 363,57,108, 0,1152,1209, -,-,-, 266574 LINE CR1 1152 chr2 74434795 74435493 CR1-Y2_Aves 156 - 74434795 74435493 0 3 162,108,196, 0,213,502, -,-,-, 266598 LINE CR1 1153 chr2 74455677 74461560 GGERV10_LTR 502 + 74455677 74461560 0 4 321,5372,52,100, 0,322,5695,5783, +,+,+,+, 266622 LTR ERVL 1153 chr2 74465239 74465694 CR1-C2 630 + 74465239 74465694 0 2 75,380, 0,75, +,+, 266626 LINE CR1 1153 chr2 74492721 74495803 CR1-Y2_Aves 79 + 74492721 74495803 0 3 712,492,634, 0,712,2448, +,+,+, 266644 LINE CR1 1153 chr2 74502922 74504023 CR1-C4 526 - 74502922 74504023 0 2 69,553, 0,548, -,-, 266651 LINE CR1 1153 chr2 74507181 74509417 GGLTR5A 475 + 74507181 74509417 0 2 222,175, 0,2061, +,+, 266653 LTR ERVL 1153 chr2 74519205 74520856 CR1-X1 555 - 74519205 74520856 0 2 89,619, 0,1032, -,-, 266663 LINE CR1 1154 chr2 74585247 74585443 GGLTR5B 242 + 74585247 74585443 0 2 84,112, 0,84, +,+, 266721 LTR ERVL 1154 chr2 74622887 74623696 CR1-L3B_Croc 154 + 74622887 74623696 0 2 300,341, 0,468, +,+, 266750 LINE CR1 1154 chr2 74653083 74653142 (TTTGG)n 608 + 74653083 74653142 0 2 15,6, 0,53, +,+, 266779 Simple_repeat Simple_repeat 144 chr2 74701064 74712249 Char12Mar1_GG 561 - 74701064 74712249 0 2 548,76, 0,11109, -,-, 266828 DNA hAT-Charlie 1154 chr2 74707374 74708266 CR1-E 759 + 74707374 74708266 0 2 288,554, 0,338, +,+, 266832 LINE CR1 1155 chr2 74723058 74724061 CR1-C3 624 + 74723058 74724061 0 2 345,365, 0,638, +,+, 266847 LINE CR1 1155 chr2 74726108 74727125 CR1-C4 463 - 74726108 74727125 0 2 419,598, 0,419, -,-, 266852 LINE CR1 1155 chr2 74739360 74739996 GGLTR5B 307 - 74739360 74739996 0 2 317,278, 0,358, -,-, 266864 LTR ERVL 1155 chr2 74806630 74807218 GGLTR3B1 828 + 74806630 74807218 0 2 507,81, 0,507, +,+, 266924 LTR ERVL 1156 chr2 74846064 74846590 GGLTR12B 615 + 74846064 74846590 0 2 127,399, 0,127, +,+, 266958 LTR ERVL 1156 chr2 74900771 74901365 CR1-C2 517 + 74900771 74901365 0 2 299,41, 0,553, +,+, 267006 LINE CR1 1156 chr2 74914753 74915864 GGLTR5A 399 - 74914753 74915864 0 2 179,315, 0,796, -,-, 267018 LTR ERVL 1156 chr2 74917629 74918481 CR1-D2 603 - 74917629 74918481 0 2 489,229, 0,623, -,-, 267024 LINE CR1 1156 chr2 74924479 74926553 CR1-Y4 474 - 74924479 74926553 0 3 764,858,439, 0,764,1635, -,-,-, 267034 LINE CR1 1156 chr2 74943674 74944570 GGERVL-C-int 815 - 74943674 74944570 0 2 530,366, 0,530, -,-, 267054 LTR ERVL 1156 chr2 74946987 74947227 GGLTR8B 478 + 74946987 74947227 0 2 130,93, 0,147, +,+, 267055 LTR ERVL 1157 chr2 74990323 74991666 Char12Mar1_GG 642 - 74990323 74991666 0 2 358,202, 0,1141, -,-, 267100 DNA hAT-Charlie 1157 chr2 75038248 75038335 (TTCC)n 298 + 75038248 75038335 0 2 51,18, 0,69, +,+, 267142 Simple_repeat Simple_repeat 1157 chr2 75067420 75068069 CR1-Y3 728 - 75067420 75068069 0 2 533,116, 0,533, -,-, 267174 LINE CR1 1157 chr2 75088800 75088917 A-rich 586 + 75088800 75088917 0 2 32,52, 0,65, +,+, 267194 Low_complexity Low_complexity 1158 chr2 75138073 75145540 GGLTR8B 401 - 75138073 75145540 0 2 554,280, 0,7187, -,-, 267234 LTR ERVL 1158 chr2 75149631 75150666 CR1-C4 545 + 75149631 75150666 0 2 515,204, 0,831, +,+, 267240 LINE CR1 1158 chr2 75159223 75162242 CR1-C4 588 - 75159223 75162242 0 2 623,644, 0,2375, -,-, 267246 LINE CR1 1158 chr2 75159897 75161067 Charlie12_GG 447 - 75159897 75161067 0 2 495,233, 0,937, -,-, 267248 DNA hAT-Charlie 1158 chr2 75185921 75185985 (TTTG)n 548 + 75185921 75185985 0 2 15,15, 0,49, +,+, 267262 Simple_repeat Simple_repeat 1158 chr2 75191048 75191244 (AT)n 823 + 75191048 75191244 0 2 95,39, 0,157, +,+, 267268 Simple_repeat Simple_repeat 1158 chr2 75198998 75201310 CR1-F2 253 + 75198998 75201310 0 3 137,101,245, 0,1841,2067, +,+,+, 267274 LINE CR1 1158 chr2 75207786 75208546 Charlie12_GG 577 - 75207786 75208546 0 2 624,136, 0,624, -,-, 267283 DNA hAT-Charlie 1158 chr2 75227337 75228383 CR1-Y1_Aves 492 - 75227337 75228383 0 2 934,112, 0,934, -,-, 267299 LINE CR1 1158 chr2 75232340 75233002 CR1-E 697 + 75232340 75233002 0 2 90,572, 0,90, +,+, 267303 LINE CR1 144 chr2 75234756 75236521 Charlie12_GG 622 - 75234756 75236521 0 3 647,343,719, 0,676,1046, -,-,-, 267305 DNA hAT-Charlie 1159 chr2 75238835 75238902 CR1-C2 803 + 75238835 75238902 0 2 36,31, 0,36, +,+, 267310 LINE CR1 1159 chr2 75257943 75258616 CR1-Y4 581 + 75257943 75258616 0 2 74,366, 0,307, +,+, 267323 LINE CR1 1159 chr2 75285698 75286713 CR1-H 736 + 75285698 75286713 0 2 592,423, 0,592, +,+, 267342 LINE CR1 1159 chr2 75308408 75309207 CR1-X1 565 + 75308408 75309207 0 2 587,212, 0,587, +,+, 267355 LINE CR1 1159 chr2 75330070 75330128 (ACACAT)n 352 + 75330070 75330128 0 2 13,16, 0,42, +,+, 267367 Simple_repeat Simple_repeat 1159 chr2 75337070 75337543 (TTCTC)n 818 + 75337070 75337543 0 2 248,203, 0,270, +,+, 267372 Simple_repeat Simple_repeat 1159 chr2 75350256 75353908 CR1-Y2_Aves 287 - 75350256 75353908 0 2 44,229, 0,3423, -,-, 267385 LINE CR1 1160 chr2 75405142 75405520 GGERVL18-LTR 739 - 75405142 75405520 0 2 140,211, 0,167, -,-, 267420 LTR ERVL 1160 chr2 75412803 75414719 GGERVL18-int 603 + 75412803 75414719 0 3 1704,139,73, 0,1704,1843, +,+,+, 267427 LTR ERVL 1161 chr2 75512520 75513572 CR1-C4 632 - 75512520 75513572 0 2 391,661, 0,391, -,-, 267485 LINE CR1 1161 chr2 75627632 75627727 (T)n 770 + 75627632 75627727 0 2 39,45, 0,50, +,+, 267554 Simple_repeat Simple_repeat 1162 chr2 75634195 75636498 CR1-Y2_Aves 34 - 75634195 75636498 0 2 1191,857, 0,1446, -,-, 267563 LINE CR1 1162 chr2 75649750 75651193 CR1-D 652 + 75649750 75651193 0 2 307,1136, 0,307, +,+, 267572 LINE CR1 1162 chr2 75659100 75659699 CR1-X 386 - 75659100 75659699 0 2 497,41, 0,558, -,-, 267578 LINE CR1 1162 chr2 75680193 75681069 CR1-Y4 690 + 75680193 75681069 0 2 248,628, 0,248, +,+, 267589 LINE CR1 1162 chr2 75715915 75715969 (CCGGC)n 444 + 75715915 75715969 0 2 6,11, 0,43, +,+, 267604 Simple_repeat Simple_repeat 1163 chr2 75876216 75876402 CR1-E 709 - 75876216 75876402 0 2 49,137, 0,49, -,-, 267665 LINE CR1 1165 chr2 76038135 76039023 Char12Mar1_GG 627 - 76038135 76039023 0 2 344,231, 0,657, -,-, 267761 DNA hAT-Charlie 1165 chr2 76121602 76123057 Charlie12_GG 536 - 76121602 76123057 0 2 1069,385, 0,1070, -,-, 267803 DNA hAT-Charlie 1165 chr2 76150249 76151450 CR1-F2 499 + 76150249 76151450 0 2 47,477, 0,724, +,+, 267824 LINE CR1 1165 chr2 76150285 76150921 CR1-Y4 505 - 76150285 76150921 0 2 481,138, 0,498, -,-, 267825 LINE CR1 1166 chr2 76205786 76206800 Char12Mar1_GG 651 - 76205786 76206800 0 2 473,65, 0,949, -,-, 267850 DNA hAT-Charlie 1166 chr2 76215367 76216063 CR1-Y2_Aves 170 + 76215367 76216063 0 2 179,495, 0,201, +,+, 267853 LINE CR1 1166 chr2 76266451 76267225 CR1-Y2_Aves 355 + 76266451 76267225 0 2 367,83, 0,691, +,+, 267888 LINE CR1 1166 chr2 76267852 76268228 GGLTR8B 302 - 76267852 76268228 0 2 223,130, 0,246, -,-, 267890 LTR ERVL 1167 chr2 76316674 76318748 CR1-Y2_Aves 317 + 76316674 76318748 0 2 319,770, 0,1304, +,+, 267918 LINE CR1 1167 chr2 76337658 76337989 CR1-D2 716 - 76337658 76337989 0 2 121,205, 0,126, -,-, 267936 LINE CR1 1167 chr2 76380241 76380839 CR1-F2 447 + 76380241 76380839 0 2 15,518, 0,80, +,+, 267955 LINE CR1 1168 chr2 76486046 76487456 GGERVL18-int 647 + 76486046 76487456 0 3 1029,141,236, 0,1033,1174, +,+,+, 268016 LTR ERVL 1168 chr2 76538719 76542207 Charlie12_GG 550 - 76538719 76542207 0 2 96,86, 0,3402, -,-, 268049 DNA hAT-Charlie 1170 chr2 76705903 76707173 CR1-Y2_Aves 269 - 76705903 76707173 0 3 195,355,686, 0,229,584, -,-,-, 268120 LINE CR1 1170 chr2 76739357 76742215 Char12Mar1_GG 614 - 76739357 76742215 0 2 969,454, 0,2404, -,-, 268142 DNA hAT-Charlie 1170 chr2 76740321 76741764 CR1-E 729 + 76740321 76741764 0 2 813,630, 0,813, +,+, 268143 LINE CR1 1170 chr2 76749434 76751134 CR1-Y1_Aves 134 - 76749434 76751134 0 2 709,263, 0,1437, -,-, 268147 LINE CR1 1170 chr2 76792981 76793066 (T)n 810 + 76792981 76793066 0 2 32,20, 0,65, +,+, 268172 Simple_repeat Simple_repeat 1171 chr2 76842365 76843452 CR1-Y2_Aves 132 + 76842365 76843452 0 2 675,394, 0,693, +,+, 268218 LINE CR1 1172 chr2 77002514 77003628 GGLTR5A 392 - 77002514 77003628 0 2 191,378, 0,736, -,-, 268307 LTR ERVL 1172 chr2 77007575 77007935 CR1-C4 524 - 77007575 77007935 0 2 185,172, 0,188, -,-, 268311 LINE CR1 1173 chr2 77081469 77084545 CR1-X2 404 + 77081469 77084545 0 2 110,490, 0,2586, +,+, 268358 LINE CR1 1173 chr2 77107382 77109766 CR1-H 795 + 77107382 77109766 0 2 1631,753, 0,1631, +,+, 268383 LINE CR1 1173 chr2 77116988 77117455 GGLTR10C1 904 - 77116988 77117455 0 2 104,363, 0,104, -,-, 268392 LTR ERVK 1173 chr2 77128232 77129025 CR1-Y2_Aves 271 + 77128232 77129025 0 2 95,691, 0,102, +,+, 268403 LINE CR1 1173 chr2 77159437 77162125 CR1-Y4 547 + 77159437 77162125 0 3 97,293,266, 0,486,2422, +,+,+, 268428 LINE CR1 1173 chr2 77160210 77161865 CR1-D 467 - 77160210 77161865 0 2 558,1097, 0,558, -,-, 268430 LINE CR1 1173 chr2 77185456 77185806 GGLTR5B 653 + 77185456 77185806 0 2 265,85, 0,265, +,+, 268448 LTR ERVL 1173 chr2 77194166 77194223 (TTTTTA)n 588 + 77194166 77194223 0 2 12,13, 0,44, +,+, 268454 Simple_repeat Simple_repeat 1174 chr2 77230781 77230933 CR1-Y1_Aves 525 + 77230781 77230933 0 2 61,91, 0,61, +,+, 268493 LINE CR1 1174 chr2 77246476 77247401 CR1-Y1_Aves 412 - 77246476 77247401 0 2 183,127, 0,798, -,-, 268506 LINE CR1 1174 chr2 77284331 77284675 GGLTR8B 375 - 77284331 77284675 0 2 209,135, 0,209, -,-, 268537 LTR ERVL 1174 chr2 77290134 77291576 GGLTR3E3 824 + 77290134 77291576 0 2 60,503, 0,939, +,+, 268548 LTR ERVL 1175 chr2 77357824 77360715 GGERVL18-int 803 - 77357824 77360715 0 3 342,1914,635, 0,342,2256, -,-,-, 268620 LTR ERVL 1175 chr2 77378515 77379117 CR1-Y4 371 + 77378515 77379117 0 2 488,114, 0,488, +,+, 268637 LINE CR1 1175 chr2 77442787 77444726 CR1-C4 459 - 77442787 77444726 0 2 527,125, 0,1814, -,-, 268687 LINE CR1 1176 chr2 77478656 77478873 GGLTR5B 588 - 77478656 77478873 0 2 98,92, 0,125, -,-, 268714 LTR ERVL 1176 chr2 77486274 77487237 GGERVL-C-int 756 - 77486274 77487237 0 2 498,465, 0,498, -,-, 268724 LTR ERVL 1177 chr2 77615140 77616342 CR1-F2 567 - 77615140 77616342 0 2 253,949, 0,253, -,-, 268835 LINE CR1 1177 chr2 77697326 77698206 CR1-X 229 + 77697326 77698206 0 3 177,96,518, 0,218,362, +,+,+, 268895 LINE CR1 1178 chr2 77754343 77754805 TguLTR5e 334 - 77754343 77754805 0 2 139,255, 0,207, -,-, 268935 LTR ERVL 1178 chr2 77790250 77790363 (T)n 808 + 77790250 77790363 0 2 31,44, 0,69, +,+, 268954 Simple_repeat Simple_repeat 1179 chr2 77899006 77900242 CR1-F2 576 - 77899006 77900242 0 2 513,717, 0,519, -,-, 269019 LINE CR1 1179 chr2 77906755 77907424 CR1-F2 607 - 77906755 77907424 0 2 164,505, 0,164, -,-, 269024 LINE CR1 1179 chr2 77933988 77934330 CR1-Y2_Aves 264 + 77933988 77934330 0 2 115,227, 0,115, +,+, 269040 LINE CR1 1179 chr2 77957852 77958584 CR1-Y2_Aves 282 - 77957852 77958584 0 2 145,586, 0,146, -,-, 269055 LINE CR1 1179 chr2 77969717 77970941 Mariner1_GG 600 - 77969717 77970941 0 2 317,735, 0,489, -,-, 269068 DNA TcMar-Mariner 1180 chr2 78090445 78091185 CR1-C4 540 + 78090445 78091185 0 2 38,67, 0,673, +,+, 269118 LINE CR1 1181 chr2 78125746 78126013 CR1-E 654 - 78125746 78126013 0 2 73,194, 0,73, -,-, 269136 LINE CR1 1181 chr2 78169656 78171492 CR1-Y4 599 - 78169656 78171492 0 2 786,797, 0,1039, -,-, 269157 LINE CR1 1182 chr2 78355014 78356062 Char12Mar1_GG 656 - 78355014 78356062 0 2 63,985, 0,63, -,-, 269266 DNA hAT-Charlie 1184 chr2 78532978 78533247 CR1-Y2_Aves 363 - 78532978 78533247 0 2 105,124, 0,145, -,-, 269364 LINE CR1 1184 chr2 78625711 78626344 CR1-L3B_Croc 205 + 78625711 78626344 0 2 108,499, 0,134, +,+, 269416 LINE CR1 1186 chr2 78790352 78790801 CR1-Y4 364 - 78790352 78790801 0 2 71,329, 0,120, -,-, 269518 LINE CR1 1186 chr2 78792913 78793626 CR1-C4 652 - 78792913 78793626 0 2 417,296, 0,417, -,-, 269520 LINE CR1 1186 chr2 78837716 78838346 CR1-X 155 - 78837716 78838346 0 2 163,467, 0,163, -,-, 269543 LINE CR1 1187 chr2 78949889 78951133 CR1-D2 517 + 78949889 78951133 0 3 919,140,160, 0,919,1084, +,+,+, 269622 LINE CR1 1187 chr2 79000236 79000939 CR1-D2 496 - 79000236 79000939 0 2 333,370, 0,333, -,-, 269669 LINE CR1 1188 chr2 79054485 79054951 CR1-D2 588 - 79054485 79054951 0 2 264,202, 0,264, -,-, 269708 LINE CR1 1188 chr2 79090005 79091305 Mariner1_GG 604 + 79090005 79091305 0 2 882,392, 0,908, +,+, 269740 DNA TcMar-Mariner 1189 chr2 79200415 79200497 (T)n 810 + 79200415 79200497 0 2 26,36, 0,46, +,+, 269809 Simple_repeat Simple_repeat 1189 chr2 79215782 79216265 CR1-Y2_Aves 189 - 79215782 79216265 0 2 135,332, 0,151, -,-, 269822 LINE CR1 1189 chr2 79219359 79220227 Charlie12_GG 532 - 79219359 79220227 0 2 708,132, 0,736, -,-, 269824 DNA hAT-Charlie 1189 chr2 79223171 79225027 Mariner1_GG 600 - 79223171 79225027 0 2 1127,191, 0,1665, -,-, 269827 DNA TcMar-Mariner 1190 chr2 79304514 79305674 GGLTR4B 662 + 79304514 79305674 0 2 235,53, 0,1107, +,+, 269881 LTR ERVL 1190 chr2 79388484 79389526 GGLTR3B4 663 + 79388484 79389526 0 2 174,42, 0,1000, +,+, 269938 LTR ERVL 1190 chr2 79388655 79389486 CR1-B2 737 - 79388655 79389486 0 2 475,351, 0,480, -,-, 269939 LINE CR1 1190 chr2 79391186 79391606 (CCTG)n 326 + 79391186 79391606 0 2 191,204, 0,216, +,+, 269942 Simple_repeat Simple_repeat 1190 chr2 79401524 79401945 (CCTG)n 322 + 79401524 79401945 0 2 191,205, 0,216, +,+, 269951 Simple_repeat Simple_repeat 1190 chr2 79427888 79428213 CR1-Y2_Aves 446 - 79427888 79428213 0 2 63,262, 0,63, -,-, 269966 LINE CR1 1191 chr2 79431608 79431907 Charlie12_GG 488 - 79431608 79431907 0 2 110,162, 0,137, -,-, 269970 DNA hAT-Charlie 1191 chr2 79483974 79486304 Char12Mar1_GG 551 - 79483974 79486304 0 2 1091,254, 0,2076, -,-, 270014 DNA hAT-Charlie 1191 chr2 79493740 79496580 CR1-X 211 + 79493740 79496580 0 2 1570,1092, 0,1748, +,+, 270020 LINE CR1 1191 chr2 79527984 79528635 CR1-11_Crp 183 - 79527984 79528635 0 2 228,213, 0,438, -,-, 270035 LINE CR1 1191 chr2 79559148 79559772 GGLTR5B 286 - 79559148 79559772 0 2 311,273, 0,351, -,-, 270051 LTR ERVL 1192 chr2 79602225 79602410 CR1-D 636 + 79602225 79602410 0 2 148,37, 0,148, +,+, 270081 LINE CR1 1192 chr2 79623079 79624092 CR1-H 302 - 79623079 79624092 0 2 241,772, 0,241, -,-, 270094 LINE CR1 1192 chr2 79679099 79679756 CR1-11_Crp 287 - 79679099 79679756 0 2 95,432, 0,225, -,-, 270138 LINE CR1 1193 chr2 79722773 79724156 CR1-D2 156 - 79722773 79724156 0 2 160,1014, 0,369, -,-, 270164 LINE CR1 1193 chr2 79769464 79770092 CR1-D 640 + 79769464 79770092 0 2 407,221, 0,407, +,+, 270201 LINE CR1 1193 chr2 79809564 79811043 GGLTR5A 421 + 79809564 79811043 0 3 78,188,251, 0,332,1228, +,+,+, 270228 LTR ERVL 1193 chr2 79818409 79819321 CR1-B2 767 - 79818409 79819321 0 2 786,121, 0,791, -,-, 270236 LINE CR1 1193 chr2 79819301 79820669 CR1-H 752 + 79819301 79820669 0 2 327,1041, 0,327, +,+, 270237 LINE CR1 1194 chr2 79828839 79829751 CR1-B2 767 - 79828839 79829751 0 2 786,121, 0,791, -,-, 270242 LINE CR1 1194 chr2 79829731 79830975 CR1-H 748 + 79829731 79830975 0 2 327,917, 0,327, +,+, 270243 LINE CR1 1194 chr2 79853937 79854189 ENS1B-LTR 830 - 79853937 79854189 0 2 212,36, 0,216, -,-, 270259 LTR ERVL 1194 chr2 79871494 79872901 CR1-Y4 587 - 79871494 79872901 0 2 596,463, 0,944, -,-, 270273 LINE CR1 1194 chr2 79890166 79891378 CR1-Y2_Aves 217 + 79890166 79891378 0 2 729,256, 0,956, +,+, 270286 LINE CR1 1194 chr2 79937373 79937769 TguLTR5d 409 - 79937373 79937769 0 2 119,253, 0,143, -,-, 270320 LTR ERVL 1195 chr2 79960495 79962912 CR1-Y4 294 + 79960495 79962912 0 2 142,104, 0,2313, +,+, 270329 LINE CR1 1195 chr2 80025165 80025590 CR1-X2 424 + 80025165 80025590 0 2 215,210, 0,215, +,+, 270358 LINE CR1 1195 chr2 80056256 80057084 CR1-Y4 551 - 80056256 80057084 0 2 191,308, 0,520, -,-, 270381 LINE CR1 1196 chr2 80142390 80142921 GGLTR8A 258 - 80142390 80142921 0 2 186,172, 0,359, -,-, 270448 LTR ERVL 1196 chr2 80168756 80169500 CR1-C4 508 + 80168756 80169500 0 2 351,241, 0,503, +,+, 270462 LINE CR1 1196 chr2 80184571 80187127 CR1-X 526 - 80184571 80187127 0 2 693,1331, 0,1225, -,-, 270477 LINE CR1 1196 chr2 80198256 80203033 CR1-C 731 + 80198256 80203033 0 2 269,89, 0,4688, +,+, 270487 LINE CR1 1197 chr2 80279644 80280555 CR1-E 769 - 80279644 80280555 0 2 877,34, 0,877, -,-, 270520 LINE CR1 1197 chr2 80316200 80317564 CR1-C4 628 + 80316200 80317564 0 2 1295,52, 0,1312, +,+, 270548 LINE CR1 1198 chr2 80443551 80444780 CR1-C4 676 - 80443551 80444780 0 2 773,454, 0,775, -,-, 270635 LINE CR1 1199 chr2 80567449 80568685 CR1-F2 570 - 80567449 80568685 0 2 1127,99, 0,1137, -,-, 270722 LINE CR1 1200 chr2 80685727 80691959 CR1-C4 616 + 80685727 80691959 0 2 482,44, 0,6188, +,+, 270792 LINE CR1 1200 chr2 80686204 80687045 GGERVL-B-int 351 + 80686204 80687045 0 2 396,367, 0,474, +,+, 270793 LTR ERVL 1200 chr2 80729468 80730112 GGLTR8B 471 - 80729468 80730112 0 2 395,198, 0,446, -,-, 270821 LTR ERVL 1202 chr2 80911956 80912286 CR1-Y2_Aves 400 - 80911956 80912286 0 2 140,169, 0,161, -,-, 270930 LINE CR1 1202 chr2 80941380 80941650 CR1-F2 641 - 80941380 80941650 0 2 134,103, 0,167, -,-, 270943 LINE CR1 1202 chr2 81001690 81002363 GGLTR8A 232 + 81001690 81002363 0 2 194,287, 0,386, +,+, 270974 LTR ERVL 1203 chr2 81064146 81064815 GGLTR8B 560 - 81064146 81064815 0 3 407,63,197, 0,407,472, -,-,-, 271012 LTR ERVL 1203 chr2 81080262 81081139 CR1-B2 721 - 81080262 81081139 0 2 759,113, 0,764, -,-, 271023 LINE CR1 1203 chr2 81081127 81082482 CR1-H 758 + 81081127 81082482 0 2 327,1028, 0,327, +,+, 271024 LINE CR1 1203 chr2 81088588 81089948 CR1-H 724 + 81088588 81089948 0 2 304,1022, 0,338, +,+, 271032 LINE CR1 1203 chr2 81093693 81098170 GGLTR7A 869 + 81093693 81098170 0 4 609,282,3415,148, 0,609,891,4329, +,+,+,+, 271035 LTR ERV1 1203 chr2 81098557 81100058 CR1-B2 728 + 81098557 81100058 0 3 223,345,428, 0,224,1073, +,+,+, 271038 LINE CR1 1203 chr2 81099126 81099628 GGLTR3F1 784 + 81099126 81099628 0 2 236,232, 0,270, +,+, 271039 LTR ERVL 1204 chr2 81210453 81211246 CR1-Y2_Aves 99 + 81210453 81211246 0 2 406,335, 0,458, +,+, 271097 LINE CR1 1204 chr2 81213255 81214016 CR1-Y1_Aves 515 - 81213255 81214016 0 2 271,270, 0,491, -,-, 271098 LINE CR1 1204 chr2 81216238 81217936 CR1-C3 656 + 81216238 81217936 0 2 976,722, 0,976, +,+, 271102 LINE CR1 1205 chr2 81291185 81291721 Char12Mar1_GG 616 - 81291185 81291721 0 2 89,56, 0,480, -,-, 271145 DNA hAT-Charlie 1206 chr2 81416002 81416092 (T)n 713 + 81416002 81416092 0 2 30,22, 0,68, +,+, 271198 Simple_repeat Simple_repeat 1206 chr2 81417905 81418188 REP131 64 - 81417905 81418188 0 2 109,149, 0,134, -,-, 271200 DNA? DNA? 1207 chr2 81638335 81639063 CR1-C4 311 + 81638335 81639063 0 2 269,459, 0,269, +,+, 271333 LINE CR1 1208 chr2 81659042 81660435 CR1-X 427 + 81659042 81660435 0 2 450,937, 0,456, +,+, 271349 LINE CR1 1208 chr2 81711874 81712527 CR1-Y2_Aves 301 + 81711874 81712527 0 2 316,199, 0,454, +,+, 271387 LINE CR1 1208 chr2 81741657 81742810 CR1-F 347 - 81741657 81742810 0 3 11,11,950, 0,192,203, -,-,-, 271412 LINE CR1 1208 chr2 81749238 81749944 CR1-Y4 556 - 81749238 81749944 0 2 358,316, 0,390, -,-, 271418 LINE CR1 1208 chr2 81773302 81776643 EAVHP_I-int 975 + 81773302 81776643 0 2 313,3026, 0,315, +,+, 271448 LTR ERVK 1209 chr2 81842993 81845268 CR1-C4 515 + 81842993 81845268 0 2 1097,473, 0,1802, +,+, 271508 LINE CR1 1209 chr2 81846699 81847199 GGLTR5B 703 - 81846699 81847199 0 2 89,366, 0,134, -,-, 271512 LTR ERVL 1210 chr2 81951621 81957447 GGERV10_LTR 993 + 81951621 81957447 0 3 220,5385,220, 0,221,5606, +,+,+, 271596 LTR ERVL 1210 chr2 81991279 81991384 (GTTT)n 406 + 81991279 81991384 0 2 49,39, 0,66, +,+, 271612 Simple_repeat Simple_repeat 1210 chr2 82038848 82039710 CR1-11_Crp 207 + 82038848 82039710 0 2 558,187, 0,675, +,+, 271656 LINE CR1 1211 chr2 82064464 82065999 GGLTR3D 528 - 82064464 82065999 0 2 911,624, 0,911, -,-, 271672 LTR ERVL 1211 chr2 82077593 82079136 GGLTR3D 541 - 82077593 82079136 0 2 915,628, 0,915, -,-, 271680 LTR ERVL 1211 chr2 82085649 82087182 CR1-B2 755 - 82085649 82087182 0 2 501,243, 0,1290, -,-, 271683 LINE CR1 1211 chr2 82086150 82086939 ENS1B-LTR 699 + 82086150 82086939 0 2 300,489, 0,300, +,+, 271684 LTR ERVL 1212 chr2 82245596 82251774 GGERVK1-int 984 + 82245596 82251774 0 4 241,5257,439,241, 0,241,5498,5937, +,+,+,+, 271826 LTR ERVK 1212 chr2 82275982 82276522 GGLTR3B4 376 - 82275982 82276522 0 2 392,114, 0,426, -,-, 271847 LTR ERVL 1212 chr2 82308535 82308595 (TTTCTT)n 410 + 82308535 82308595 0 2 32,8, 0,52, +,+, 271884 Simple_repeat Simple_repeat 1213 chr2 82344180 82345052 ENS1B-LTR 541 - 82344180 82345052 0 2 129,619, 0,253, -,-, 271913 LTR ERVL 1213 chr2 82413229 82413900 GGLTR11-int 441 - 82413229 82413900 0 2 228,134, 0,537, -,-, 271980 LTR ERV1 1213 chr2 82417400 82420516 CR1-X1 455 + 82417400 82420516 0 3 1281,1444,391, 0,1281,2725, +,+,+, 271985 LINE CR1 1213 chr2 82437769 82439061 GGLTR5A 490 - 82437769 82439061 0 2 150,252, 0,1040, -,-, 272005 LTR ERVL 1213 chr2 82439270 82443950 GGERVL-B-int 303 - 82439270 82443950 0 2 577,667, 0,4013, -,-, 272010 LTR ERVL 1214 chr2 82452598 82453235 CR1-Y2_Aves 330 + 82452598 82453235 0 2 179,447, 0,190, +,+, 272024 LINE CR1 1214 chr2 82477002 82477762 CR1-F2 404 - 82477002 82477762 0 2 107,286, 0,474, -,-, 272049 LINE CR1 1214 chr2 82483670 82484339 CR1-C4 575 - 82483670 82484339 0 2 490,179, 0,490, -,-, 272057 LINE CR1 1214 chr2 82495965 82497938 GGERVL-B-int 713 - 82495965 82497938 0 2 1474,497, 0,1476, -,-, 272074 LTR ERVL 1214 chr2 82500000 82501938 CR1-D2 496 - 82500000 82501938 0 2 190,296, 0,1642, -,-, 272075 LINE CR1 1214 chr2 82519995 82520116 A-rich 314 + 82519995 82520116 0 2 13,71, 0,50, +,+, 272095 Low_complexity Low_complexity 1215 chr2 82590289 82590484 CR1-D2 316 - 82590289 82590484 0 2 131,64, 0,131, -,-, 272178 LINE CR1 1215 chr2 82590475 82591468 CR1-D 484 - 82590475 82591468 0 2 594,399, 0,594, -,-, 272179 LINE CR1 1215 chr2 82606114 82608131 Charlie12_GG 559 - 82606114 82608131 0 3 439,997,92, 0,928,1925, -,-,-, 272195 DNA hAT-Charlie 1215 chr2 82610183 82612218 CR1-C3 686 - 82610183 82612218 0 3 511,493,541, 0,511,1494, -,-,-, 272200 LINE CR1 1215 chr2 82637124 82638243 GGLTR5A 362 - 82637124 82638243 0 2 155,387, 0,732, -,-, 272227 LTR ERVL 1215 chr2 82646058 82647061 ENS3-int 863 - 82646058 82647061 0 2 216,783, 0,220, -,-, 272234 LTR ERVL 1215 chr2 82667174 82671335 CR1-C 845 - 82667174 82671335 0 2 1204,236, 0,3925, -,-, 272258 LINE CR1 1215 chr2 82668369 82671097 CR1-G 837 - 82668369 82671097 0 2 1332,1396, 0,1332, -,-, 272259 LINE CR1 1215 chr2 82695747 82696409 GGLTR8A 295 + 82695747 82696409 0 2 520,110, 0,552, +,+, 272287 LTR ERVL 1215 chr2 82700651 82700769 (T)n 787 + 82700651 82700769 0 2 22,55, 0,63, +,+, 272291 Simple_repeat Simple_repeat 1216 chr2 82709641 82710499 CR1-C4 435 - 82709641 82710499 0 2 412,446, 0,412, -,-, 272306 LINE CR1 1216 chr2 82724562 82725191 CR1-X2 408 - 82724562 82725191 0 2 151,440, 0,189, -,-, 272322 LINE CR1 1216 chr2 82756702 82758355 GGLTR12C 750 - 82756702 82758355 0 2 473,297, 0,1356, -,-, 272353 LTR ERVL 1216 chr2 82772309 82773086 ENS1B-LTR 480 - 82772309 82773086 0 2 441,249, 0,528, -,-, 272372 LTR ERVL 1216 chr2 82775586 82776532 Char12Mar1_GG 560 - 82775586 82776532 0 2 377,201, 0,745, -,-, 272378 DNA hAT-Charlie 1216 chr2 82798978 82799034 (TGTA)n 396 + 82798978 82799034 0 2 7,8, 0,48, +,+, 272397 Simple_repeat Simple_repeat 1216 chr2 82820543 82821067 CR1-F2 811 - 82820543 82821067 0 2 257,267, 0,257, -,-, 272420 LINE CR1 1216 chr2 82827883 82830752 CR1-F2 797 - 82827883 82830752 0 2 1199,1025, 0,1844, -,-, 272434 LINE CR1 1217 chr2 82839926 82840813 GGLTR12B 628 - 82839926 82840813 0 2 210,677, 0,210, -,-, 272451 LTR ERVL 1217 chr2 82869248 82872230 GGERVL-A-int 257 - 82869248 82872230 0 2 965,355, 0,2627, -,-, 272476 LTR ERVL 1217 chr2 82870243 82871578 GGLTR12A 800 - 82870243 82871578 0 2 539,217, 0,1118, -,-, 272477 LTR ERVL 1217 chr2 82872230 82872698 GGLTR9 635 - 82872230 82872698 0 2 76,274, 0,194, -,-, 272479 LTR ERVL 1217 chr2 82948292 82948885 CR1-C3 739 - 82948292 82948885 0 2 36,557, 0,36, -,-, 272571 LINE CR1 1217 chr2 82952530 82953301 TguLTR5e 283 - 82952530 82953301 0 2 219,233, 0,538, -,-, 272574 LTR ERVL 1218 chr2 83003298 83006135 CR1-F 925 - 83003298 83006135 0 2 1090,1747, 0,1090, -,-, 272624 LINE CR1 1218 chr2 83009650 83010061 CR1-H 731 - 83009650 83010061 0 2 203,206, 0,205, -,-, 272628 LINE CR1 1218 chr2 83044367 83045777 CR1-E 621 - 83044367 83045777 0 2 160,423, 0,987, -,-, 272663 LINE CR1 1218 chr2 83053833 83056109 CR1-C4 479 + 83053833 83056109 0 3 605,110,981, 0,608,1295, +,+,+, 272674 LINE CR1 1218 chr2 83080996 83081181 CR1-D2 588 + 83080996 83081181 0 2 141,44, 0,141, +,+, 272697 LINE CR1 1218 chr2 83087253 83088232 CR1-F2 515 - 83087253 83088232 0 2 742,237, 0,742, -,-, 272702 LINE CR1 1219 chr2 83115555 83116649 CR1-H 847 - 83115555 83116649 0 2 796,296, 0,798, -,-, 272731 LINE CR1 1219 chr2 83171620 83174013 CR1-F2 409 + 83171620 83174013 0 2 505,484, 0,1909, +,+, 272764 LINE CR1 1219 chr2 83216843 83220735 CR1-Y1_Aves 467 + 83216843 83220735 0 3 542,119,331, 0,549,3561, +,+,+, 272804 LINE CR1 1220 chr2 83245201 83246132 CR1-Y2_Aves 376 + 83245201 83246132 0 2 725,181, 0,750, +,+, 272819 LINE CR1 1220 chr2 83246161 83246740 CR1-C4 166 + 83246161 83246740 0 3 251,231,97, 0,251,482, +,+,+, 272820 LINE CR1 1220 chr2 83300925 83301784 CR1-Y2 392 + 83300925 83301784 0 2 149,381, 0,478, +,+, 272857 LINE CR1 1220 chr2 83301074 83301405 GGERV10_LTR 655 - 83301074 83301405 0 2 160,78, 0,253, -,-, 272859 LTR ERVL 1220 chr2 83349921 83349972 (TTATTG)n 408 + 83349921 83349972 0 2 15,16, 0,35, +,+, 272892 Simple_repeat Simple_repeat 1221 chr2 83421120 83421692 CR1-Y4 544 + 83421120 83421692 0 2 345,227, 0,345, +,+, 272924 LINE CR1 1221 chr2 83440111 83442225 CR1-F2 456 - 83440111 83442225 0 2 790,1127, 0,987, -,-, 272933 LINE CR1 1224 chr2 83781358 83782442 CR1-Y2 110 + 83781358 83782442 0 3 190,407,220, 0,376,864, +,+,+, 273159 LINE CR1 1225 chr2 83932232 83933316 CR1-L3B_Croc 316 + 83932232 83933316 0 3 78,516,158, 0,229,926, +,+,+, 273241 LINE CR1 1225 chr2 83960056 83961412 CR1-Y2_Aves 305 + 83960056 83961412 0 3 160,115,1055, 0,160,301, +,+,+, 273256 LINE CR1 1226 chr2 84032424 84032740 GGLTR12C 419 - 84032424 84032740 0 2 101,215, 0,101, -,-, 273292 LTR ERVL 1226 chr2 84066446 84066501 (AAC)n 454 + 84066446 84066501 0 2 6,12, 0,43, +,+, 273313 Simple_repeat Simple_repeat 1227 chr2 84175121 84176263 CR1-C4 561 - 84175121 84176263 0 2 134,176, 0,966, -,-, 273360 LINE CR1 1227 chr2 84220360 84220748 CR1-E 772 - 84220360 84220748 0 2 325,60, 0,328, -,-, 273386 LINE CR1 1228 chr2 84349450 84351517 CR1-F2 605 + 84349450 84351517 0 2 1648,419, 0,1648, +,+, 273452 LINE CR1 1228 chr2 84399928 84401901 CR1-C4 515 + 84399928 84401901 0 2 415,1527, 0,446, +,+, 273484 LINE CR1 1229 chr2 84452492 84454290 CR1-E 357 + 84452492 84454290 0 2 152,1459, 0,339, +,+, 273514 LINE CR1 1229 chr2 84471643 84471883 CR1-B2 660 - 84471643 84471883 0 2 16,16, 0,224, -,-, 273521 LINE CR1 1230 chr2 84568664 84568712 A-rich 470 + 84568664 84568712 0 2 12,12, 0,36, +,+, 273576 Low_complexity Low_complexity 1230 chr2 84575196 84575668 CR1-C4 717 + 84575196 84575668 0 2 43,429, 0,43, +,+, 273584 LINE CR1 1230 chr2 84596754 84596900 A-rich 523 + 84596754 84596900 0 2 54,33, 0,113, +,+, 273600 Low_complexity Low_complexity 1232 chr2 84838918 84839657 GGLTR8B 198 - 84838918 84839657 0 3 230,281,163, 0,242,576, -,-,-, 273730 LTR ERVL 1233 chr2 84987453 84988290 Mariner1_GG 501 - 84987453 84988290 0 2 400,434, 0,403, -,-, 273806 DNA TcMar-Mariner 1234 chr2 85104942 85105492 CR1-Y4 663 - 85104942 85105492 0 2 40,510, 0,40, -,-, 273886 LINE CR1 1234 chr2 85175078 85175961 CR1-11_Crp 60 + 85175078 85175961 0 2 294,286, 0,597, +,+, 273920 LINE CR1 1235 chr2 85290197 85292201 CR1-D 585 - 85290197 85292201 0 3 399,441,850, 0,701,1154, -,-,-, 273996 LINE CR1 1235 chr2 85293658 85294731 Char12Mar1_GG 530 - 85293658 85294731 0 2 380,693, 0,380, -,-, 273999 DNA hAT-Charlie 1236 chr2 85388344 85389024 CR1-L3A_Croc 282 + 85388344 85389024 0 2 257,145, 0,535, +,+, 274054 LINE CR1 1236 chr2 85419428 85420341 Char12Mar1_GG 619 - 85419428 85420341 0 2 129,436, 0,477, -,-, 274085 DNA hAT-Charlie 1237 chr2 85528143 85529357 CR1-Y1_Aves 466 - 85528143 85529357 0 2 83,330, 0,884, -,-, 274141 LINE CR1 1238 chr2 85629264 85629649 CR1-Y4 233 + 85629264 85629649 0 3 23,11,234, 0,96,151, +,+,+, 274210 LINE CR1 1238 chr2 85681669 85681724 (TTATAT)n 410 + 85681669 85681724 0 2 19,11, 0,44, +,+, 274241 Simple_repeat Simple_repeat 1238 chr2 85701748 85701796 (ATGTAT)n 488 + 85701748 85701796 0 2 17,6, 0,42, +,+, 274251 Simple_repeat Simple_repeat 1238 chr2 85718885 85719584 GGLTR8A 249 - 85718885 85719584 0 2 256,423, 0,276, -,-, 274259 LTR ERVL 1239 chr2 85798274 85799000 CR1-E 366 - 85798274 85799000 0 2 139,453, 0,273, -,-, 274310 LINE CR1 1240 chr2 85857793 85860476 CR1-X2 435 + 85857793 85860476 0 2 20,142, 0,2541, +,+, 274350 LINE CR1 1241 chr2 86056648 86057132 TguLTR5d 426 - 86056648 86057132 0 2 139,251, 0,233, -,-, 274471 LTR ERVL 1241 chr2 86076792 86077808 CR1-H 809 + 86076792 86077808 0 2 449,567, 0,449, +,+, 274478 LINE CR1 1241 chr2 86084878 86085724 CR1-X2 550 - 86084878 86085724 0 2 763,83, 0,763, -,-, 274481 LINE CR1 1242 chr2 86210137 86211334 GGERVL-B-int 435 - 86210137 86211334 0 2 153,1042, 0,155, -,-, 274542 LTR ERVL 1243 chr2 86272369 86273544 CR1-L3A_Croc 295 + 86272369 86273544 0 2 387,289, 0,886, +,+, 274583 LINE CR1 1243 chr2 86281449 86281943 CR1-Y4 605 + 86281449 86281943 0 2 332,162, 0,332, +,+, 274593 LINE CR1 1244 chr2 86384144 86386898 CR1-L3B_Croc 229 - 86384144 86386898 0 2 410,342, 0,2412, -,-, 274660 LINE CR1 1244 chr2 86384557 86385036 CR1-F2 645 - 86384557 86385036 0 2 233,246, 0,233, -,-, 274661 LINE CR1 1244 chr2 86422975 86423575 GGLTR3A 610 - 86422975 86423575 0 2 125,427, 0,173, -,-, 274693 LTR ERVL 1244 chr2 86439746 86440346 GGLTR3A 610 - 86439746 86440346 0 2 125,427, 0,173, -,-, 274707 LTR ERVL 1244 chr2 86458760 86460254 CR1-Y2_Aves 361 - 86458760 86460254 0 3 594,143,119, 0,847,1375, -,-,-, 274724 LINE CR1 1244 chr2 86476056 86476736 CR1-L3A_Croc 380 - 86476056 86476736 0 2 226,76, 0,604, -,-, 274744 LINE CR1 1244 chr2 86503205 86504441 CR1-F2 570 + 86503205 86504441 0 2 235,468, 0,768, +,+, 274764 LINE CR1 1245 chr2 86553166 86553524 CR1-X2 366 - 86553166 86553524 0 2 202,156, 0,202, -,-, 274796 LINE CR1 1245 chr2 86597100 86597184 (T)n 856 + 86597100 86597184 0 2 25,24, 0,60, +,+, 274833 Simple_repeat Simple_repeat 1245 chr2 86600837 86600911 A-rich 502 + 86600837 86600911 0 2 34,16, 0,58, +,+, 274836 Low_complexity Low_complexity 1245 chr2 86609380 86611000 CR1-Y4 384 - 86609380 86611000 0 2 1285,335, 0,1285, -,-, 274842 LINE CR1 1246 chr2 86665064 86666211 CR1-E 492 - 86665064 86666211 0 2 86,1061, 0,86, -,-, 274898 LINE CR1 1246 chr2 86672107 86673182 CR1-C4 574 - 86672107 86673182 0 2 628,447, 0,628, -,-, 274904 LINE CR1 1246 chr2 86683319 86684978 CR1-C3 634 + 86683319 86684978 0 2 609,1042, 0,617, +,+, 274911 LINE CR1 1246 chr2 86706120 86706734 Mariner1_GG 555 - 86706120 86706734 0 2 446,118, 0,496, -,-, 274923 DNA TcMar-Mariner 1246 chr2 86714987 86719208 GGERVL-A-int 804 + 86714987 86719208 0 3 528,1345,2345, 0,528,1876, +,+,+, 274927 LTR ERVL 1248 chr2 86922737 86925462 CR1-L3B_Croc 309 - 86922737 86925462 0 4 79,60,339,140, 0,591,2023,2585, -,-,-,-, 275130 LINE CR1 1248 chr2 86960392 86961654 CR1-C3 499 + 86960392 86961654 0 2 470,789, 0,473, +,+, 275162 LINE CR1 1248 chr2 86964671 86965252 GGLTR3E2 708 + 86964671 86965252 0 2 411,131, 0,450, +,+, 275164 LTR ERVL 1248 chr2 86985838 86986474 CR1-X 237 - 86985838 86986474 0 2 547,77, 0,559, -,-, 275181 LINE CR1 1248 chr2 86991261 86993912 CR1-Y2_Aves 191 - 86991261 86993912 0 2 1696,941, 0,1710, -,-, 275187 LINE CR1 1249 chr2 87122584 87123155 CR1-Y4 636 + 87122584 87123155 0 2 345,226, 0,345, +,+, 275307 LINE CR1 1249 chr2 87137969 87139250 CR1-D2 545 + 87137969 87139250 0 3 471,694,116, 0,471,1165, +,+,+, 275311 LINE CR1 1249 chr2 87153754 87154783 CR1-E 375 + 87153754 87154783 0 2 364,647, 0,382, +,+, 275322 LINE CR1 1249 chr2 87154789 87155638 CR1-Y2_Aves 237 + 87154789 87155638 0 2 327,420, 0,429, +,+, 275323 LINE CR1 1250 chr2 87189113 87191478 GGLTR10C-int 620 - 87189113 87191478 0 2 377,1988, 0,377, -,-, 275349 LTR ERVK 1250 chr2 87193684 87195334 CR1-Y4 454 - 87193684 87195334 0 2 504,959, 0,691, -,-, 275352 LINE CR1 1250 chr2 87210390 87211366 CR1-L3A_Croc 206 - 87210390 87211366 0 2 579,314, 0,662, -,-, 275361 LINE CR1 1251 chr2 87382293 87383023 CR1-X1 459 + 87382293 87383023 0 2 120,602, 0,128, +,+, 275501 LINE CR1 1252 chr2 87445763 87446795 GGLTR10C1 882 - 87445763 87446795 0 2 363,666, 0,366, -,-, 275567 LTR ERVK 1252 chr2 87527856 87529591 CR1-D2 682 + 87527856 87529591 0 3 277,809,65, 0,850,1670, +,+,+, 275641 LINE CR1 1253 chr2 87591784 87592241 GGLTR5A 339 - 87591784 87592241 0 2 114,304, 0,153, -,-, 275696 LTR ERVL 1253 chr2 87607944 87608811 GGERVL-A-int 204 - 87607944 87608811 0 2 233,234, 0,633, -,-, 275716 LTR ERVL 1253 chr2 87663446 87663515 (CTTTTC)n 414 + 87663446 87663515 0 2 26,15, 0,54, +,+, 275760 Simple_repeat Simple_repeat 1253 chr2 87677468 87682126 ENS1-LTR 982 - 87677468 87682126 0 3 913,2828,913, 0,913,3745, -,-,-, 275777 LTR ERVL 1254 chr2 87688466 87691581 ENS3-int 917 - 87688466 87691581 0 2 2198,913, 0,2202, -,-, 275783 LTR ERVL 1254 chr2 87731596 87733264 CR1-L3A_Croc 182 - 87731596 87733264 0 2 447,626, 0,1042, -,-, 275829 LINE CR1 1254 chr2 87736315 87736400 (A)n 892 + 87736315 87736400 0 2 31,22, 0,63, +,+, 275833 Simple_repeat Simple_repeat 1254 chr2 87754381 87756992 CR1-D 684 - 87754381 87756992 0 2 1175,526, 0,2085, -,-, 275850 LINE CR1 1254 chr2 87759151 87759260 (T)n 699 + 87759151 87759260 0 2 24,43, 0,66, +,+, 275852 Simple_repeat Simple_repeat 1254 chr2 87774512 87775294 CR1-D2 736 + 87774512 87775294 0 2 441,197, 0,585, +,+, 275863 LINE CR1 1254 chr2 87810810 87811554 CR1-C4 659 - 87810810 87811554 0 3 124,367,163, 0,124,581, -,-,-, 275888 LINE CR1 1255 chr2 87891308 87891559 Char12Mar1_GG 528 - 87891308 87891559 0 2 97,154, 0,97, -,-, 275960 DNA hAT-Charlie 1256 chr2 87953374 87957293 CR1-C4 374 - 87953374 87957293 0 2 1982,1588, 0,2331, -,-, 276002 LINE CR1 1256 chr2 87957991 87958925 CR1-X2 691 - 87957991 87958925 0 2 43,691, 0,243, -,-, 276004 LINE CR1 1256 chr2 88019746 88020159 CR1-X2 543 + 88019746 88020159 0 2 192,221, 0,192, +,+, 276039 LINE CR1 1256 chr2 88049545 88050264 CR1-F0 894 - 88049545 88050264 0 2 659,53, 0,666, -,-, 276067 LINE CR1 1256 chr2 88052101 88053226 CR1-G 815 + 88052101 88053226 0 2 468,657, 0,468, +,+, 276069 LINE CR1 1257 chr2 88111482 88112231 CR1-C4 558 + 88111482 88112231 0 2 131,616, 0,133, +,+, 276115 LINE CR1 1257 chr2 88162757 88163254 CR1-F2 527 - 88162757 88163254 0 2 174,321, 0,176, -,-, 276145 LINE CR1 1257 chr2 88198962 88199185 Char12Mar1_GG 571 - 88198962 88199185 0 2 83,140, 0,83, -,-, 276168 DNA hAT-Charlie 1258 chr2 88242018 88242291 CR1-Y2_Aves 338 + 88242018 88242291 0 2 144,77, 0,196, +,+, 276204 LINE CR1 1258 chr2 88242432 88243129 CR1-Y2_Aves 429 + 88242432 88243129 0 3 132,293,204, 0,189,493, +,+,+, 276206 LINE CR1 1258 chr2 88287653 88291249 CR1-F2 272 + 88287653 88291249 0 2 511,842, 0,2754, +,+, 276240 LINE CR1 1258 chr2 88288176 88290413 CR1-D 551 + 88288176 88290413 0 3 83,437,1561, 0,239,676, +,+,+, 276241 LINE CR1 1258 chr2 88336987 88337463 CR1-Y2_Aves 307 + 88336987 88337463 0 2 247,159, 0,317, +,+, 276266 LINE CR1 1259 chr2 88361657 88361960 CR1-Y1_Aves 333 - 88361657 88361960 0 2 223,80, 0,223, -,-, 276283 LINE CR1 1259 chr2 88374863 88375232 GGLTR5B 349 + 88374863 88375232 0 2 136,101, 0,268, +,+, 276292 LTR ERVL 1259 chr2 88375255 88375712 CR1-D2 545 - 88375255 88375712 0 2 74,383, 0,74, -,-, 276293 LINE CR1 1259 chr2 88378726 88379030 Chompy-6_Croc 58 + 88378726 88379030 0 2 188,88, 0,216, +,+, 276298 DNA PIF-Harbinger 1259 chr2 88397229 88397759 GGLTR3F1 938 - 88397229 88397759 0 2 494,36, 0,494, -,-, 276312 LTR ERVL 1259 chr2 88397759 88403572 GGLTR3F1 901 - 88397759 88403572 0 2 5318,494, 0,5319, -,-, 276313 LTR ERVL 1259 chr2 88403953 88404892 CR1-D2 344 + 88403953 88404892 0 2 324,545, 0,394, +,+, 276314 LINE CR1 1259 chr2 88430025 88430569 GGLTR8B 560 - 88430025 88430569 0 2 513,31, 0,513, -,-, 276336 LTR ERVL 1260 chr2 88514087 88515802 CR1-X2 585 - 88514087 88515802 0 3 44,422,319, 0,974,1396, -,-,-, 276393 LINE CR1 1260 chr2 88517671 88518060 GGLTR4B 573 - 88517671 88518060 0 2 115,239, 0,150, -,-, 276395 LTR ERVL 1260 chr2 88557091 88558985 CR1-Y2_Aves 250 - 88557091 88558985 0 2 259,1630, 0,264, -,-, 276429 LINE CR1 1260 chr2 88565875 88566143 Char12Mar1_GG 710 - 88565875 88566143 0 2 102,163, 0,105, -,-, 276435 DNA hAT-Charlie 1260 chr2 88588658 88589035 CR1-H 826 + 88588658 88589035 0 2 111,266, 0,111, +,+, 276443 LINE CR1 1261 chr2 88625501 88631308 CR1-C4 625 + 88625501 88631308 0 2 897,131, 0,5676, +,+, 276470 LINE CR1 1261 chr2 88651551 88651895 CR1-Y1_Aves 434 - 88651551 88651895 0 2 230,92, 0,252, -,-, 276486 LINE CR1 1261 chr2 88695127 88695878 CR1-B 871 + 88695127 88695878 0 2 521,230, 0,521, +,+, 276521 LINE CR1 1261 chr2 88710140 88711757 Char12Mar1_GG 496 - 88710140 88711757 0 2 382,917, 0,700, -,-, 276532 DNA hAT-Charlie 1262 chr2 88755481 88756063 CR1-E 641 + 88755481 88756063 0 2 40,114, 0,468, +,+, 276559 LINE CR1 1262 chr2 88801250 88801776 CR1-Y2_Aves 263 + 88801250 88801776 0 2 152,321, 0,205, +,+, 276581 LINE CR1 1262 chr2 88818135 88818522 GGLTR5A 429 - 88818135 88818522 0 2 44,342, 0,45, -,-, 276591 LTR ERVL 1262 chr2 88857454 88857832 CR1-C4 452 + 88857454 88857832 0 2 77,300, 0,78, +,+, 276609 LINE CR1 1263 chr2 88906884 88907563 GGLTR8B 282 - 88906884 88907563 0 2 233,417, 0,262, -,-, 276640 LTR ERVL 1263 chr2 88920394 88921228 CR1-F2 592 - 88920394 88921228 0 2 584,250, 0,584, -,-, 276653 LINE CR1 1263 chr2 88941055 88941378 CR1-Y1_Aves 144 - 88941055 88941378 0 2 182,129, 0,194, -,-, 276670 LINE CR1 1264 chr2 89039454 89039997 TguLTR5e 362 - 89039454 89039997 0 2 148,288, 0,255, -,-, 276731 LTR ERVL 1264 chr2 89094960 89095919 CR1-Y2_Aves 359 - 89094960 89095919 0 2 711,248, 0,711, -,-, 276764 LINE CR1 1264 chr2 89106383 89109577 CR1-Y4 550 + 89106383 89109577 0 3 1254,806,216, 0,2144,2978, +,+,+, 276769 LINE CR1 1264 chr2 89116374 89117736 CR1-Y2_Aves 256 + 89116374 89117736 0 2 422,760, 0,602, +,+, 276780 LINE CR1 1265 chr2 89132131 89132243 GGLTR3B4 710 - 89132131 89132243 0 2 57,52, 0,60, -,-, 276788 LTR ERVL 1265 chr2 89248736 89251540 CR1-Y2_Aves 237 - 89248736 89251540 0 4 200,159,153,107, 0,453,918,2697, -,-,-,-, 276860 LINE CR1 1265 chr2 89251540 89252148 CR1-Y2_Aves 111 - 89251540 89252148 0 2 148,289, 0,319, -,-, 276863 LINE CR1 1266 chr2 89303266 89303591 CR1-B 957 - 89303266 89303591 0 2 291,34, 0,291, -,-, 276892 LINE CR1 1266 chr2 89349548 89351998 CR1-L3B_Croc 154 + 89349548 89351998 0 2 278,777, 0,1673, +,+, 276915 LINE CR1 1267 chr2 89460998 89461831 REP131 183 - 89460998 89461831 0 2 152,210, 0,623, -,-, 276978 DNA? DNA? 1267 chr2 89495470 89496127 CR1-Y2_Aves 295 - 89495470 89496127 0 2 269,324, 0,333, -,-, 276999 LINE CR1 1267 chr2 89515115 89515757 CR1-Y4 151 + 89515115 89515757 0 2 310,331, 0,311, +,+, 277009 LINE CR1 1268 chr2 89523890 89526455 CR1-Y2_Aves 380 - 89523890 89526455 0 2 646,112, 0,2453, -,-, 277014 LINE CR1 1269 chr2 89731396 89732041 CR1-Y2_Aves 179 + 89731396 89732041 0 2 16,516, 0,129, +,+, 277149 LINE CR1 1269 chr2 89743533 89744291 CR1-Y2_Aves 349 - 89743533 89744291 0 2 143,535, 0,223, -,-, 277159 LINE CR1 1270 chr2 89839238 89840315 GGLTR8B 269 - 89839238 89840315 0 2 442,146, 0,931, -,-, 277222 LTR ERVL 1270 chr2 89862547 89863545 CR1-H 780 - 89862547 89863545 0 2 569,193, 0,805, -,-, 277239 LINE CR1 1270 chr2 89872898 89874148 CR1-D 395 - 89872898 89874148 0 2 323,299, 0,951, -,-, 277245 LINE CR1 1270 chr2 89876848 89876903 (TTGTG)n 482 + 89876848 89876903 0 2 16,10, 0,45, +,+, 277249 Simple_repeat Simple_repeat 1271 chr2 90012002 90013531 CR1-C4 529 - 90012002 90013531 0 2 591,937, 0,592, -,-, 277333 LINE CR1 1271 chr2 90020138 90020515 (GAAA)n 882 + 90020138 90020515 0 2 181,180, 0,197, +,+, 277340 Simple_repeat Simple_repeat 1272 chr2 90081287 90081811 CR1-Y2_Aves 446 - 90081287 90081811 0 2 39,283, 0,241, -,-, 277382 LINE CR1 1272 chr2 90126909 90130507 CR1-F2 404 + 90126909 90130507 0 2 230,191, 0,3407, +,+, 277398 LINE CR1 1273 chr2 90216522 90216795 CR1-F2 559 + 90216522 90216795 0 2 165,108, 0,165, +,+, 277442 LINE CR1 1273 chr2 90256478 90258955 CR1-L3B_Croc 186 + 90256478 90258955 0 4 115,382,228,187, 0,672,1865,2290, +,+,+,+, 277458 LINE CR1 1275 chr2 90449242 90449518 CR1-X2 625 + 90449242 90449518 0 2 77,60, 0,216, +,+, 277575 LINE CR1 1275 chr2 90522119 90522828 CR1-X2 216 + 90522119 90522828 0 2 135,272, 0,437, +,+, 277615 LINE CR1 1276 chr2 90587337 90588026 CR1-Y2_Aves 116 + 90587337 90588026 0 2 271,414, 0,275, +,+, 277651 LINE CR1 1276 chr2 90623071 90623644 CR1-D2 604 - 90623071 90623644 0 3 173,98,283, 0,173,290, -,-,-, 277675 LINE CR1 1276 chr2 90687601 90688143 GGLTR5B 233 - 90687601 90688143 0 2 233,197, 0,345, -,-, 277718 LTR ERVL 1276 chr2 90689182 90690097 GGERVL-B-int 291 - 90689182 90690097 0 4 64,474,175,165, 0,65,539,750, -,-,-,-, 277722 LTR ERVL 1277 chr2 90746130 90747138 CR1-F2 646 + 90746130 90747138 0 2 684,324, 0,684, +,+, 277771 LINE CR1 1277 chr2 90791266 90792399 CR1-Y2_Aves 178 - 90791266 90792399 0 2 194,516, 0,617, -,-, 277793 LINE CR1 1278 chr2 90900962 90902152 CR1-Y2_Aves 304 - 90900962 90902152 0 2 518,300, 0,890, -,-, 277862 LINE CR1 1278 chr2 90923978 90925039 CR1-X2 389 - 90923978 90925039 0 2 847,204, 0,857, -,-, 277875 LINE CR1 1279 chr2 91024055 91027509 CR1-C4 540 + 91024055 91027509 0 2 301,90, 0,3364, +,+, 277936 LINE CR1 1279 chr2 91082079 91082407 CR1-B2 768 + 91082079 91082407 0 2 167,123, 0,205, +,+, 277974 LINE CR1 1280 chr2 91220548 91221550 CR1-X1 593 + 91220548 91221550 0 2 138,862, 0,140, +,+, 278068 LINE CR1 1281 chr2 91309290 91310388 OldhAT1 228 - 91309290 91310388 0 2 142,762, 0,336, -,-, 278138 DNA hAT-Ac 1282 chr2 91422426 91422822 (TTTC)n 759 + 91422426 91422822 0 2 192,183, 0,213, +,+, 278210 Simple_repeat Simple_repeat 1283 chr2 91571684 91571787 (TTTA)n 318 + 91571684 91571787 0 2 55,27, 0,76, +,+, 278317 Simple_repeat Simple_repeat 1283 chr2 91591951 91592444 Eulor8 350 - 91591951 91592444 0 2 143,99, 0,394, -,-, 278338 DNA TcMar? 1283 chr2 91598152 91598317 GGLTR4B 742 - 91598152 91598317 0 2 49,116, 0,49, -,-, 278345 LTR ERVL 1284 chr2 91699979 91700116 G-rich 598 + 91699979 91700116 0 2 46,63, 0,74, +,+, 278417 Low_complexity Low_complexity 1284 chr2 91733999 91734779 CR1-Y2_Aves 424 + 91733999 91734779 0 2 96,648, 0,132, +,+, 278454 LINE CR1 1286 chr2 91886067 91886866 CR1-L3B_Croc 244 + 91886067 91886866 0 2 286,183, 0,616, +,+, 278546 LINE CR1 1287 chr2 92045601 92047890 CR1-C3 496 - 92045601 92047890 0 2 1818,471, 0,1818, -,-, 278626 LINE CR1 1287 chr2 92112369 92114386 CR1-C4 450 + 92112369 92114386 0 3 167,485,1021, 0,219,996, +,+,+, 278665 LINE CR1 1288 chr2 92144843 92149153 CR1-F2 749 - 92144843 92149153 0 2 427,3883, 0,427, -,-, 278687 LINE CR1 1288 chr2 92177446 92178285 CR1-H2 574 + 92177446 92178285 0 2 92,747, 0,92, +,+, 278698 LINE CR1 1289 chr2 92307043 92307522 CR1-D2 500 - 92307043 92307522 0 2 95,152, 0,327, -,-, 278762 LINE CR1 1289 chr2 92307148 92307331 GGERVL18-LTR 817 + 92307148 92307331 0 2 66,65, 0,118, +,+, 278763 LTR ERVL 1289 chr2 92318134 92318957 CR1-D2 531 - 92318134 92318957 0 2 92,493, 0,330, -,-, 278772 LINE CR1 1289 chr2 92318234 92318426 GGERVL18-LTR 831 + 92318234 92318426 0 2 66,75, 0,117, +,+, 278773 LTR ERVL 1289 chr2 92334747 92336558 GGLTR8B 435 - 92334747 92336558 0 2 728,282, 0,1529, -,-, 278780 LTR ERVL 1289 chr2 92365607 92366293 ENS1B-LTR 445 + 92365607 92366293 0 2 315,341, 0,345, +,+, 278800 LTR ERVL 1289 chr2 92382739 92383458 CR1-Y2_Aves 125 - 92382739 92383458 0 3 116,130,427, 0,116,292, -,-,-, 278806 LINE CR1 1290 chr2 92419150 92419699 Char12Mar1_GG 526 - 92419150 92419699 0 2 488,34, 0,515, -,-, 278823 DNA hAT-Charlie 1290 chr2 92421272 92422019 CR1-X2 550 - 92421272 92422019 0 2 440,307, 0,440, -,-, 278825 LINE CR1 1290 chr2 92524403 92528011 Charlie12_GG 564 - 92524403 92528011 0 2 368,761, 0,2847, -,-, 278904 DNA hAT-Charlie 1290 chr2 92524816 92525651 CR1-C3 671 - 92524816 92525651 0 3 40,596,199, 0,40,636, -,-,-, 278905 LINE CR1 1290 chr2 92526065 92526462 GGLTR5A 516 + 92526065 92526462 0 2 294,66, 0,331, +,+, 278908 LTR ERVL 1290 chr2 92528018 92528728 Charlie12_GG 330 - 92528018 92528728 0 2 94,158, 0,552, -,-, 278909 DNA hAT-Charlie 1291 chr2 92563879 92564986 CR1-F 591 - 92563879 92564986 0 2 86,1021, 0,86, -,-, 278931 LINE CR1 1291 chr2 92623320 92624085 GGLTR8B 251 + 92623320 92624085 0 2 340,160, 0,605, +,+, 278959 LTR ERVL 1291 chr2 92633850 92634408 GGLTR5B 554 + 92633850 92634408 0 2 427,85, 0,473, +,+, 278977 LTR ERVL 1292 chr2 92687198 92687524 GGERV10_LTR 518 + 92687198 92687524 0 2 84,157, 0,169, +,+, 279022 LTR ERVL 1292 chr2 92750343 92750704 Z-REP 0 + 92750343 92750704 0 2 53,200, 0,161, +,+, 279074 Satellite macro 1292 chr2 92750396 92750819 GGLTR5A 412 - 92750396 92750819 0 2 108,315, 0,108, -,-, 279075 LTR ERVL 1292 chr2 92788593 92788653 (T)n 945 + 92788593 92788653 0 2 19,17, 0,43, +,+, 279099 Simple_repeat Simple_repeat 1293 chr2 92856675 92857653 CR1-Y2_Aves 221 - 92856675 92857653 0 2 721,208, 0,770, -,-, 279157 LINE CR1 1293 chr2 92912678 92913116 CR1-Y2_Aves 221 + 92912678 92913116 0 2 323,96, 0,342, +,+, 279205 LINE CR1 1293 chr2 92916020 92918900 CR1-F 891 - 92916020 92918900 0 2 508,2372, 0,508, -,-, 279208 LINE CR1 1294 chr2 92936812 92937490 GGLTR8B 234 - 92936812 92937490 0 2 202,452, 0,226, -,-, 279227 LTR ERVL 1294 chr2 92955329 92956232 CR1-Y2_Aves 172 - 92955329 92956232 0 2 421,254, 0,649, -,-, 279248 LINE CR1 1294 chr2 92956226 92956628 CR1-Y2_Aves 234 - 92956226 92956628 0 2 124,266, 0,136, -,-, 279249 LINE CR1 1294 chr2 92963233 92963507 GGLTR8A 431 + 92963233 92963507 0 2 206,68, 0,206, +,+, 279253 LTR ERVL 1294 chr2 92976464 92976998 CR1-Y2_Aves 196 + 92976464 92976998 0 2 304,203, 0,331, +,+, 279262 LINE CR1 1294 chr2 92981785 92982571 GGLTR8B 442 + 92981785 92982571 0 2 191,560, 0,226, +,+, 279266 LTR ERVL 1294 chr2 92988020 92989191 CR1-Y1_Aves 354 - 92988020 92989191 0 3 283,241,362, 0,555,809, -,-,-, 279270 LINE CR1 1295 chr2 93077791 93078965 Charlie12_GG 611 - 93077791 93078965 0 4 85,86,232,108, 0,150,799,1066, -,-,-,-, 279345 DNA hAT-Charlie 1295 chr2 93104682 93107234 CR1-Y3 601 + 93104682 93107234 0 2 298,581, 0,1971, +,+, 279371 LINE CR1 1295 chr2 93112746 93114487 CR1-C3 614 + 93112746 93114487 0 2 200,641, 0,1100, +,+, 279382 LINE CR1 1295 chr2 93162452 93163225 CR1-H 767 - 93162452 93163225 0 2 508,265, 0,508, -,-, 279418 LINE CR1 1296 chr2 93194258 93194322 (TTTTTG)n 424 + 93194258 93194322 0 2 22,7, 0,57, +,+, 279456 Simple_repeat Simple_repeat 1296 chr2 93203535 93203607 (TCTTTT)n 538 + 93203535 93203607 0 2 6,20, 0,52, +,+, 279472 Simple_repeat Simple_repeat 1296 chr2 93218747 93219130 CR1-X 259 - 93218747 93219130 0 2 258,125, 0,258, -,-, 279493 LINE CR1 1296 chr2 93233818 93233920 (AATATG)n 496 + 93233818 93233920 0 2 44,31, 0,71, +,+, 279507 Simple_repeat Simple_repeat 1296 chr2 93234824 93234931 (T)n 776 + 93234824 93234931 0 2 32,23, 0,84, +,+, 279511 Simple_repeat Simple_repeat 1296 chr2 93250060 93256888 CR1-Y1_Aves 521 + 93250060 93256888 0 2 286,183, 0,6645, +,+, 279536 LINE CR1 1296 chr2 93294552 93295541 ENS1-LTR 401 + 93294552 93295541 0 2 109,425, 0,564, +,+, 279589 LTR ERVL 1296 chr2 93298255 93299015 CR1-E 400 - 93298255 93299015 0 2 106,632, 0,128, -,-, 279594 LINE CR1 1296 chr2 93310206 93311078 CR1-Y2_Aves 188 - 93310206 93311078 0 2 669,108, 0,764, -,-, 279602 LINE CR1 1296 chr2 93317186 93317423 GGLTR5B 427 - 93317186 93317423 0 2 149,88, 0,149, -,-, 279612 LTR ERVL 1297 chr2 93323520 93324669 CR1-D2 696 + 93323520 93324669 0 2 133,1016, 0,133, +,+, 279621 LINE CR1 1297 chr2 93355114 93357554 CR1-Y4 507 + 93355114 93357554 0 4 108,266,448,463, 0,108,959,1977, +,+,+,+, 279670 LINE CR1 1297 chr2 93358126 93360363 GGERVL-C-int 529 - 93358126 93360363 0 4 900,343,566,352, 0,900,1301,1885, -,-,-,-, 279673 LTR ERVL 1297 chr2 93368745 93368814 (ATTAAT)n 408 + 93368745 93368814 0 2 7,6, 0,63, +,+, 279679 Simple_repeat Simple_repeat 1297 chr2 93369141 93369654 CR1-D 543 + 93369141 93369654 0 2 59,454, 0,59, +,+, 279683 LINE CR1 1297 chr2 93378633 93379847 CR1-F2 577 - 93378633 93379847 0 2 393,805, 0,409, -,-, 279693 LINE CR1 1297 chr2 93415367 93415583 GGLTR5A 355 + 93415367 93415583 0 2 121,95, 0,121, +,+, 279740 LTR ERVL 1297 chr2 93445839 93446424 REP131 130 - 93445839 93446424 0 2 127,212, 0,373, -,-, 279774 DNA? DNA? 1297 chr2 93446567 93447600 CR1-Y2_Aves 209 - 93446567 93447600 0 2 156,790, 0,243, -,-, 279775 LINE CR1 1298 chr2 93456485 93459424 CR1-C4 502 + 93456485 93459424 0 2 1707,652, 0,2287, +,+, 279784 LINE CR1 1298 chr2 93462879 93463546 Char12Mar1_GG 569 - 93462879 93463546 0 2 165,377, 0,290, -,-, 279791 DNA hAT-Charlie 1298 chr2 93477696 93478770 CR1-D2 511 - 93477696 93478770 0 2 286,604, 0,470, -,-, 279809 LINE CR1 1298 chr2 93548412 93548933 GGLTR3F2 822 - 93548412 93548933 0 2 78,393, 0,128, -,-, 279896 LTR ERVL 1298 chr2 93552380 93553729 CR1-Y 802 + 93552380 93553729 0 2 63,477, 0,872, +,+, 279900 LINE CR1 1298 chr2 93555214 93557352 CR1-Y2_Aves 117 + 93555214 93557352 0 3 184,512,336, 0,675,1802, +,+,+, 279904 LINE CR1 1298 chr2 93558866 93565485 GGERVL-A-int 795 + 93558866 93565485 0 3 496,79,65, 0,496,6554, +,+,+, 279911 LTR ERVL 1298 chr2 93559455 93565419 CR1-F 910 + 93559455 93565419 0 2 964,298, 0,5666, +,+, 279912 LINE CR1 1298 chr2 93560419 93565121 ENS1-LTR 936 + 93560419 93565121 0 3 939,2824,939, 0,939,3763, +,+,+, 279913 LTR ERVL 1298 chr2 93570757 93573249 CR1-D2 413 + 93570757 93573249 0 2 154,125, 0,2367, +,+, 279919 LINE CR1 1299 chr2 93601797 93601855 (TGTT)n 518 + 93601797 93601855 0 2 11,6, 0,52, +,+, 279945 Simple_repeat Simple_repeat 1299 chr2 93618673 93620198 CR1-Y2_Aves 153 - 93618673 93620198 0 2 637,828, 0,697, -,-, 279961 LINE CR1 1299 chr2 93627038 93627280 (GGAA)n 908 + 93627038 93627280 0 2 50,178, 0,64, +,+, 279969 Simple_repeat Simple_repeat 1299 chr2 93629893 93630216 GGLTR5B 384 + 93629893 93630216 0 3 59,143,88, 0,59,235, +,+,+, 279971 LTR ERVL 1299 chr2 93662888 93664307 CR1-Y4 591 + 93662888 93664307 0 2 452,315, 0,1104, +,+, 280001 LINE CR1 1300 chr2 93725081 93726407 CR1-X2 420 - 93725081 93726407 0 2 230,121, 0,1205, -,-, 280054 LINE CR1 1300 chr2 93743152 93744803 CR1-F 898 + 93743152 93744803 0 2 801,850, 0,801, +,+, 280069 LINE CR1 1300 chr2 93806005 93806813 CR1-Y4 219 + 93806005 93806813 0 2 87,709, 0,99, +,+, 280123 LINE CR1 1300 chr2 93835990 93836948 GGLTR9 639 + 93835990 93836948 0 2 231,73, 0,885, +,+, 280142 LTR ERVL 1300 chr2 93836218 93836863 CR1-E 785 - 93836218 93836863 0 2 541,104, 0,541, -,-, 280143 LINE CR1 1300 chr2 93839010 93839665 GGLTR5A 230 - 93839010 93839665 0 3 183,27,198, 0,233,457, -,-,-, 280146 LTR ERVL 1300 chr2 93839193 93839467 Z-REP 0 + 93839193 93839467 0 2 50,167, 0,107, +,+, 280147 Satellite macro 1300 chr2 93839979 93840526 CR1-X2 637 - 93839979 93840526 0 2 341,204, 0,343, -,-, 280149 LINE CR1 1301 chr2 93886579 93888292 CR1-D 746 + 93886579 93888292 0 2 1100,590, 0,1123, +,+, 280189 LINE CR1 1301 chr2 93914319 93916985 CR1-Y2 393 + 93914319 93916985 0 2 103,298, 0,2368, +,+, 280204 LINE CR1 1301 chr2 93941408 93942610 CR1-X2 539 - 93941408 93942610 0 2 456,746, 0,456, -,-, 280229 LINE CR1 1301 chr2 93954988 93955423 CR1-Y1_Aves 473 + 93954988 93955423 0 2 136,286, 0,149, +,+, 280238 LINE CR1 1301 chr2 93966479 93967394 CR1-F2 456 - 93966479 93967394 0 2 589,169, 0,746, -,-, 280246 LINE CR1 1302 chr2 93991541 93991954 CR1-Y1_Aves 449 - 93991541 93991954 0 2 63,347, 0,66, -,-, 280269 LINE CR1 1302 chr2 94070746 94072147 CR1-F2 266 - 94070746 94072147 0 2 1243,116, 0,1285, -,-, 280329 LINE CR1 1302 chr2 94081935 94083594 CR1-C4 497 - 94081935 94083594 0 2 904,747, 0,912, -,-, 280335 LINE CR1 1302 chr2 94105307 94105583 CR1-D2 207 + 94105307 94105583 0 2 108,159, 0,117, +,+, 280351 LINE CR1 1302 chr2 94108630 94109053 CR1-C2 866 + 94108630 94109053 0 2 141,282, 0,141, +,+, 280353 LINE CR1 1303 chr2 94176100 94179675 CR1-Y2_Aves 147 - 94176100 94179675 0 3 154,312,661, 0,208,2914, -,-,-, 280407 LINE CR1 1303 chr2 94176535 94177313 CR1-H2 207 - 94176535 94177313 0 2 308,230, 0,548, -,-, 280408 LINE CR1 1303 chr2 94180992 94182149 CR1-Y1_Aves 442 - 94180992 94182149 0 2 164,447, 0,710, -,-, 280416 LINE CR1 1304 chr2 94319528 94320335 CR1-Y1_Aves 389 + 94319528 94320335 0 2 418,389, 0,418, +,+, 280545 LINE CR1 1304 chr2 94339613 94339744 CR1-C3 605 - 94339613 94339744 0 2 51,76, 0,55, -,-, 280566 LINE CR1 1304 chr2 94341510 94344737 CR1-C2 431 - 94341510 94344737 0 3 33,258,641, 0,2328,2586, -,-,-, 280570 LINE CR1 1304 chr2 94345670 94346012 Char12Mar1_GG 510 - 94345670 94346012 0 2 104,235, 0,107, -,-, 280573 DNA hAT-Charlie 1304 chr2 94353517 94353724 CR1-D 835 + 94353517 94353724 0 2 162,45, 0,162, +,+, 280579 LINE CR1 1305 chr2 94372550 94373531 CR1-C4 602 + 94372550 94373531 0 2 177,796, 0,185, +,+, 280600 LINE CR1 1305 chr2 94393444 94394258 CR1-X 461 + 94393444 94394258 0 2 83,446, 0,368, +,+, 280616 LINE CR1 1305 chr2 94439128 94439219 (ATAA)n 260 + 94439128 94439219 0 2 46,17, 0,74, +,+, 280659 Simple_repeat Simple_repeat 1305 chr2 94450452 94451683 CR1-X2 589 + 94450452 94451683 0 2 162,158, 0,1073, +,+, 280675 LINE CR1 1306 chr2 94621493 94621698 CR1-X 685 - 94621493 94621698 0 2 50,155, 0,50, -,-, 280817 LINE CR1 1307 chr2 94662779 94663004 Char12Mar1_GG 797 - 94662779 94663004 0 2 70,152, 0,73, -,-, 280850 DNA hAT-Charlie 1307 chr2 94755486 94757224 CR1-C3 676 - 94755486 94757224 0 2 365,1365, 0,373, -,-, 280930 LINE CR1 1308 chr2 94774938 94775233 GGLTR5A 392 - 94774938 94775233 0 2 58,196, 0,99, -,-, 280946 LTR ERVL 1308 chr2 94794908 94795535 CR1-Y1_Aves 401 + 94794908 94795535 0 2 353,113, 0,514, +,+, 280969 LINE CR1 1308 chr2 94798671 94799356 CR1-E 320 - 94798671 94799356 0 3 175,346,139, 0,200,546, -,-,-, 280972 LINE CR1 1308 chr2 94830364 94831484 CR1-F 869 + 94830364 94831484 0 2 131,989, 0,131, +,+, 281022 LINE CR1 1308 chr2 94879803 94882400 CR1-Y2_Aves 234 - 94879803 94882400 0 4 267,319,127,277, 0,1285,2005,2320, -,-,-,-, 281071 LINE CR1 1309 chr2 94918769 94919304 GGLTR5A 376 + 94918769 94919304 0 2 415,99, 0,436, +,+, 281104 LTR ERVL 1309 chr2 94931365 94936346 CR1-C4 619 + 94931365 94936346 0 2 2429,218, 0,4763, +,+, 281118 LINE CR1 1309 chr2 94933820 94936124 CR1-F2 523 - 94933820 94936124 0 3 658,640,1005, 0,658,1299, -,-,-, 281120 LINE CR1 1309 chr2 94988355 94989457 CR1-C4 231 - 94988355 94989457 0 2 210,187, 0,915, -,-, 281178 LINE CR1 1309 chr2 94997230 94998300 CR1-X1 624 + 94997230 94998300 0 2 225,845, 0,225, +,+, 281184 LINE CR1 1309 chr2 95012262 95012462 CR1-F0 484 + 95012262 95012462 0 2 148,52, 0,148, +,+, 281200 LINE CR1 1309 chr2 95013416 95013851 Char12Mar1_GG 700 - 95013416 95013851 0 2 359,76, 0,359, -,-, 281201 DNA hAT-Charlie 1309 chr2 95020503 95020889 GGLTR5B 550 + 95020503 95020889 0 2 182,149, 0,237, +,+, 281211 LTR ERVL 1310 chr2 95036890 95037537 TguLTR5e 407 - 95036890 95037537 0 2 438,145, 0,502, -,-, 281230 LTR ERVL 1310 chr2 95065708 95067292 CR1-E 446 + 95065708 95067292 0 2 758,294, 0,1290, +,+, 281256 LINE CR1 1310 chr2 95066466 95066997 GGLTR6 413 - 95066466 95066997 0 3 155,121,239, 0,155,292, -,-,-, 281257 LTR ERVL 1310 chr2 95081558 95082065 GGLTR5B 203 - 95081558 95082065 0 2 259,236, 0,271, -,-, 281275 LTR ERVL 1310 chr2 95146990 95147417 GGLTR8B 363 - 95146990 95147417 0 2 129,94, 0,333, -,-, 281338 LTR ERVL 1311 chr2 95159166 95167812 Char12Mar1_GG 651 - 95159166 95167812 0 2 565,43, 0,8603, -,-, 281350 DNA hAT-Charlie 1311 chr2 95160560 95161283 GGLTR8A 461 + 95160560 95161283 0 2 560,162, 0,561, +,+, 281352 LTR ERVL 1311 chr2 95172517 95173148 CR1-E 469 + 95172517 95173148 0 2 89,542, 0,89, +,+, 281365 LINE CR1 1311 chr2 95200893 95201410 GGLTR3F2 816 + 95200893 95201410 0 2 239,231, 0,286, +,+, 281387 LTR ERVL 1311 chr2 95228816 95235836 CR1-C3 652 - 95228816 95235836 0 2 729,91, 0,6929, -,-, 281412 LINE CR1 1311 chr2 95229545 95235745 GGERVK1-int 985 - 95229545 95235745 0 4 241,446,5272,241, 0,241,687,5959, -,-,-,-, 281413 LTR ERVK 1311 chr2 95240721 95242835 CR1-C2 179 - 95240721 95242835 0 6 174,23,494,394,488,97, 0,363,386,929,1459,2017, -,-,-,-,-,-, 281422 LINE CR1 1311 chr2 95241964 95242133 CR1-Y 198 - 95241964 95242133 0 2 84,38, 0,131, -,-, 281424 LINE CR1 1311 chr2 95260209 95262759 CR1-Y3 382 + 95260209 95262759 0 2 1489,922, 0,1628, +,+, 281439 LINE CR1 1311 chr2 95268507 95268971 TguLTR5e 187 + 95268507 95268971 0 2 232,166, 0,298, +,+, 281447 LTR ERVL 1311 chr2 95275806 95280641 Charlie12_GG 609 - 95275806 95280641 0 2 560,781, 0,4054, -,-, 281454 DNA hAT-Charlie 1312 chr2 95290809 95293279 CR1-C3 613 + 95290809 95293279 0 2 425,1764, 0,706, +,+, 281472 LINE CR1 1312 chr2 95346502 95347623 GGLTR3B1 810 - 95346502 95347623 0 2 254,257, 0,864, -,-, 281531 LTR ERVL 1312 chr2 95356717 95357555 Mariner1_GG 631 - 95356717 95357555 0 2 402,436, 0,402, -,-, 281543 DNA TcMar-Mariner 1312 chr2 95415516 95416089 GGLTR5B 446 + 95415516 95416089 0 2 458,86, 0,487, +,+, 281616 LTR ERVL 1312 chr2 95416738 95417280 CR1-C4 343 - 95416738 95417280 0 2 216,314, 0,228, -,-, 281619 LINE CR1 1313 chr2 95432111 95432728 CR1-C4 638 + 95432111 95432728 0 2 52,550, 0,67, +,+, 281638 LINE CR1 1313 chr2 95473724 95477275 CR1-Y4 391 - 95473724 95477275 0 3 528,1226,983, 0,528,2568, -,-,-, 281681 LINE CR1 1313 chr2 95511141 95512172 CR1-C3 621 + 95511141 95512172 0 2 406,519, 0,512, +,+, 281715 LINE CR1 1313 chr2 95529445 95531040 CR1-Y1_Aves 337 - 95529445 95531040 0 2 413,1181, 0,414, -,-, 281746 LINE CR1 1313 chr2 95542451 95544046 CR1-Y1_Aves 337 - 95542451 95544046 0 2 413,1181, 0,414, -,-, 281768 LINE CR1 1314 chr2 95560635 95561195 CR1-C 235 + 95560635 95561195 0 2 125,170, 0,390, +,+, 281788 LINE CR1 1314 chr2 95576611 95577871 CR1-Y4 572 - 95576611 95577871 0 3 72,426,530, 0,110,730, -,-,-, 281806 LINE CR1 1314 chr2 95603179 95603712 GGLTR5A 266 + 95603179 95603712 0 2 409,59, 0,474, +,+, 281844 LTR ERVL 1314 chr2 95633769 95634827 CR1-F2 599 + 95633769 95634827 0 2 640,415, 0,643, +,+, 281884 LINE CR1 1314 chr2 95645477 95647254 CR1-F 488 + 95645477 95647254 0 2 307,326, 0,1451, +,+, 281891 LINE CR1 1314 chr2 95645784 95646923 ENS1-LTR 205 - 95645784 95646923 0 2 847,194, 0,945, -,-, 281892 LTR ERVL 1314 chr2 95667154 95667990 GGLTR12C 465 + 95667154 95667990 0 2 121,250, 0,586, +,+, 281915 LTR ERVL 1314 chr2 95679004 95680449 Char12Mar1_GG 505 - 95679004 95680449 0 3 270,129,877, 0,400,568, -,-,-, 281925 DNA hAT-Charlie 1315 chr2 95695864 95699219 CR1-H 810 - 95695864 95699219 0 2 1787,1568, 0,1787, -,-, 281943 LINE CR1 1315 chr2 95748764 95751294 CR1-X 528 + 95748764 95751294 0 2 1497,662, 0,1868, +,+, 282004 LINE CR1 1315 chr2 95750261 95750632 GGLTR3A 939 + 95750261 95750632 0 2 68,303, 0,68, +,+, 282005 LTR ERVL 1315 chr2 95751899 95752956 CR1-D 797 - 95751899 95752956 0 2 104,578, 0,479, -,-, 282006 LINE CR1 1315 chr2 95776890 95779045 CR1-C4 515 - 95776890 95779045 0 4 410,317,301,296, 0,431,1024,1859, -,-,-,-, 282042 LINE CR1 1315 chr2 95796588 95797438 CR1-C4 575 + 95796588 95797438 0 2 131,191, 0,659, +,+, 282059 LINE CR1 1315 chr2 95810736 95810838 (ACAA)n 420 + 95810736 95810838 0 2 23,11, 0,91, +,+, 282080 Simple_repeat Simple_repeat 1315 chr2 95812473 95812532 (TAA)n 370 + 95812473 95812532 0 2 7,23, 0,36, +,+, 282083 Simple_repeat Simple_repeat 1316 chr2 95821383 95821775 Char12Mar1_GG 680 - 95821383 95821775 0 2 61,331, 0,61, -,-, 282094 DNA hAT-Charlie 1316 chr2 95836902 95836985 (T)n 950 + 95836902 95836985 0 2 22,21, 0,62, +,+, 282113 Simple_repeat Simple_repeat 1316 chr2 95840450 95840725 CR1-X2 593 + 95840450 95840725 0 2 71,185, 0,90, +,+, 282117 LINE CR1 1316 chr2 95907743 95907822 (AAT)n 424 + 95907743 95907822 0 2 32,14, 0,65, +,+, 282167 Simple_repeat Simple_repeat 1316 chr2 95911144 95911950 GGLTR8A 508 - 95911144 95911950 0 2 614,192, 0,614, -,-, 282172 LTR ERVL 1316 chr2 95911950 95912920 CR1-C4 501 + 95911950 95912920 0 2 545,425, 0,545, +,+, 282173 LINE CR1 1316 chr2 95929387 95932500 CR1-C4 427 + 95929387 95932500 0 6 443,414,88,214,807,206, 0,1354,1768,1856,2070,2907, +,+,+,+,+,+, 282191 LINE CR1 1317 chr2 95975255 95975633 GGLTR8A 400 - 95975255 95975633 0 2 110,260, 0,118, -,-, 282247 LTR ERVL 1317 chr2 95989774 95991110 Mariner1_GG 456 + 95989774 95991110 0 2 28,1261, 0,75, +,+, 282264 DNA TcMar-Mariner 1317 chr2 96000204 96000795 TguLTR5e 318 + 96000204 96000795 0 2 326,139, 0,452, +,+, 282275 LTR ERVL 1317 chr2 96004135 96004730 GGLTR8A 560 + 96004135 96004730 0 2 347,232, 0,363, +,+, 282279 LTR ERVL 1317 chr2 96024393 96026599 CR1-Y4 516 - 96024393 96026599 0 2 364,970, 0,1236, -,-, 282299 LINE CR1 1317 chr2 96028859 96031537 CR1-Y4 416 - 96028859 96031537 0 2 881,1018, 0,1660, -,-, 282304 LINE CR1 1317 chr2 96033884 96036047 CR1-C4 643 - 96033884 96036047 0 2 608,211, 0,1952, -,-, 282308 LINE CR1 1317 chr2 96034493 96035819 CR1-F 377 + 96034493 96035819 0 2 341,981, 0,345, +,+, 282309 LINE CR1 1317 chr2 96052038 96053237 CR1-H2 816 + 96052038 96053237 0 2 317,882, 0,317, +,+, 282331 LINE CR1 1317 chr2 96064543 96064724 (TA)n 649 + 96064543 96064724 0 2 98,50, 0,131, +,+, 282346 Simple_repeat Simple_repeat 1318 chr2 96083735 96084331 Mariner1b_GG 500 - 96083735 96084331 0 2 99,458, 0,138, -,-, 282366 DNA TcMar-Mariner 1318 chr2 96098085 96099446 CR1-C4 428 + 96098085 96099446 0 2 332,194, 0,1167, +,+, 282381 LINE CR1 1318 chr2 96114496 96116457 Charlie12_GG 629 - 96114496 96116457 0 2 1858,60, 0,1901, -,-, 282400 DNA hAT-Charlie 1318 chr2 96151868 96152077 GGLTR5B 468 - 96151868 96152077 0 2 89,73, 0,136, -,-, 282435 LTR ERVL 1318 chr2 96153021 96154509 CR1-C4 249 + 96153021 96154509 0 3 474,686,204, 0,487,1284, +,+,+, 282438 LINE CR1 1319 chr2 96229969 96231244 ENS1B-LTR 381 - 96229969 96231244 0 2 351,455, 0,820, -,-, 282507 LTR ERVL 1319 chr2 96241908 96242298 CR1-C4 448 + 96241908 96242298 0 2 57,184, 0,206, +,+, 282519 LINE CR1 1319 chr2 96256158 96257461 GGERVL-C-int 861 - 96256158 96257461 0 2 527,776, 0,527, -,-, 282529 LTR ERVL 1319 chr2 96274188 96274582 Char12Mar1_GG 652 + 96274188 96274582 0 2 255,107, 0,287, +,+, 282550 DNA hAT-Charlie 1319 chr2 96280930 96281291 CR1-Y1_Aves 345 + 96280930 96281291 0 2 27,207, 0,154, +,+, 282557 LINE CR1 1319 chr2 96285815 96288745 CR1-X1 519 - 96285815 96288745 0 2 750,378, 0,2552, -,-, 282565 LINE CR1 1319 chr2 96303796 96305761 GGERVL-B-int 752 + 96303796 96305761 0 2 496,1467, 0,498, +,+, 282584 LTR ERVL 1320 chr2 96343825 96345905 CR1-Y 535 - 96343825 96345905 0 2 538,1503, 0,577, -,-, 282627 LINE CR1 1320 chr2 96360752 96360807 (GACATA)n 420 + 96360752 96360807 0 2 10,11, 0,44, +,+, 282640 Simple_repeat Simple_repeat 1320 chr2 96418426 96428737 Char12Mar1_GG 740 - 96418426 96428737 0 2 47,91, 0,10220, -,-, 282695 DNA hAT-Charlie 1320 chr2 96448591 96448809 GGLTR4B 624 + 96448591 96448809 0 2 134,84, 0,134, +,+, 282723 LTR ERVL 1320 chr2 96449205 96449758 CR1-Y1_Aves 350 - 96449205 96449758 0 2 378,110, 0,443, -,-, 282724 LINE CR1 20 chr2 96467700 96469666 Charlie12_GG 508 - 96467700 96469666 0 2 1812,127, 0,1839, -,-, 282745 DNA hAT-Charlie 1321 chr2 96480769 96481583 GGLTR8B 200 - 96480769 96481583 0 2 274,396, 0,418, -,-, 282758 LTR ERVL 1321 chr2 96501266 96501540 LFSINE_Vert 338 + 96501266 96501540 0 2 135,84, 0,190, +,+, 282777 SINE tRNA 1321 chr2 96578338 96579123 GGLTR12C 493 + 96578338 96579123 0 2 104,261, 0,524, +,+, 282837 LTR ERVL 1321 chr2 96579174 96581250 ENS3-int 331 + 96579174 96581250 0 3 1012,704,359, 0,1013,1717, +,+,+, 282839 LTR ERVL 1321 chr2 96595999 96600001 GGERVL-A-int 859 - 96595999 96600001 0 3 527,43,3388, 0,527,614, -,-,-, 282848 LTR ERVL 1322 chr2 96613982 96615594 GGERVL-C-int 862 - 96613982 96615594 0 2 527,1084, 0,528, -,-, 282865 LTR ERVL 1322 chr2 96662305 96663334 CR1-Y2_Aves 178 - 96662305 96663334 0 2 325,439, 0,590, -,-, 282899 LINE CR1 1322 chr2 96687592 96691203 CR1-C4 584 - 96687592 96691203 0 2 547,669, 0,2942, -,-, 282914 LINE CR1 1322 chr2 96692539 96693246 CR1-C4 557 - 96692539 96693246 0 2 64,643, 0,64, -,-, 282915 LINE CR1 1322 chr2 96695893 96697163 CR1-E 453 - 96695893 96697163 0 2 710,205, 0,1065, -,-, 282916 LINE CR1 1322 chr2 96701184 96702250 Char12Mar1_GG 556 - 96701184 96702250 0 3 491,336,198, 0,491,868, -,-,-, 282920 DNA hAT-Charlie 1323 chr2 96747604 96747990 GGLTR8B 175 + 96747604 96747990 0 2 178,148, 0,238, +,+, 282950 LTR ERVL 1323 chr2 96788836 96789568 GGLTR9 640 + 96788836 96789568 0 2 286,65, 0,667, +,+, 282973 LTR ERVL 1323 chr2 96798751 96800916 CR1-Y2_Aves 357 + 96798751 96800916 0 2 1986,167, 0,1998, +,+, 282978 LINE CR1 1323 chr2 96811310 96811473 CR1-D 837 + 96811310 96811473 0 2 98,65, 0,98, +,+, 282985 LINE CR1 1323 chr2 96836880 96837889 CR1-X1 612 - 96836880 96837889 0 2 526,135, 0,874, -,-, 283000 LINE CR1 1324 chr2 96887775 96888085 hAT6-N1_Croc 192 + 96887775 96888085 0 2 234,45, 0,265, +,+, 283036 DNA hAT-hAT6 1324 chr2 96961700 96962024 CR1-Y1_Aves 526 - 96961700 96962024 0 2 273,46, 0,278, -,-, 283079 LINE CR1 1327 chr2 97280296 97280488 (AT)n 622 + 97280296 97280488 0 2 58,121, 0,71, +,+, 283224 Simple_repeat Simple_repeat 1327 chr2 97339071 97339430 CR1-F2 479 + 97339071 97339430 0 2 180,178, 0,181, +,+, 283261 LINE CR1 1328 chr2 97396521 97396578 (TGTT)n 550 + 97396521 97396578 0 2 6,7, 0,50, +,+, 283282 Simple_repeat Simple_repeat 1328 chr2 97425264 97425640 GGLTR8A 656 + 97425264 97425640 0 2 160,216, 0,160, +,+, 283297 LTR ERVL 1329 chr2 97538241 97539060 CR1-Y4 485 + 97538241 97539060 0 2 450,144, 0,675, +,+, 283344 LINE CR1 1329 chr2 97541791 97542333 GGLTR5B 620 - 97541791 97542333 0 2 174,343, 0,199, -,-, 283348 LTR ERVL 1329 chr2 97563272 97564117 CR1-F2 489 - 97563272 97564117 0 2 688,156, 0,689, -,-, 283360 LINE CR1 1329 chr2 97644386 97644821 CR1-Y1_Aves 566 - 97644386 97644821 0 3 108,56,179, 0,153,256, -,-,-, 283396 LINE CR1 1330 chr2 97752525 97752796 (CCCTAA)n 601 + 97752525 97752796 0 2 162,98, 0,173, +,+, 283451 Simple_repeat Simple_repeat 1330 chr2 97756141 97757419 Mariner1_GG 644 - 97756141 97757419 0 2 507,645, 0,633, -,-, 283454 DNA TcMar-Mariner 1331 chr2 97815681 97816086 CR1-C3 573 + 97815681 97816086 0 2 205,200, 0,205, +,+, 283480 LINE CR1 1331 chr2 97818185 97819649 GGLTR8B 469 - 97818185 97819649 0 2 85,739, 0,725, -,-, 283482 LTR ERVL 1331 chr2 97853579 97853870 CR1-D2 713 - 97853579 97853870 0 2 150,141, 0,150, -,-, 283501 LINE CR1 1331 chr2 97857503 97857630 CR1-D2 642 . 97857503 97857630 0 2 67,60, 0,67, -,+, 283502 LINE CR1 1331 chr2 97880093 97880596 CR1-C4 502 + 97880093 97880596 0 2 83,414, 0,89, +,+, 283513 LINE CR1 1331 chr2 97881721 97883177 CR1-F2 504 - 97881721 97883177 0 2 190,1266, 0,190, -,-, 283515 LINE CR1 1331 chr2 97889876 97890634 CR1-X 506 + 97889876 97890634 0 2 127,631, 0,127, +,+, 283516 LINE CR1 1332 chr2 97926267 97927132 CR1-F2 683 + 97926267 97927132 0 2 277,588, 0,277, +,+, 283535 LINE CR1 1332 chr2 97961632 97962333 CR1-F2 655 - 97961632 97962333 0 2 612,89, 0,612, -,-, 283554 LINE CR1 1332 chr2 97987866 97988469 CR1-D 733 - 97987866 97988469 0 2 188,415, 0,188, -,-, 283581 LINE CR1 1333 chr2 98124664 98124724 A-rich 412 + 98124664 98124724 0 2 26,11, 0,49, +,+, 283676 Low_complexity Low_complexity 1333 chr2 98169436 98170094 CR1-Y2_Aves 291 - 98169436 98170094 0 2 197,461, 0,197, -,-, 283708 LINE CR1 1334 chr2 98259456 98260241 CR1-D2 595 + 98259456 98260241 0 2 188,597, 0,188, +,+, 283753 LINE CR1 1335 chr2 98322511 98325478 CR1-E 561 + 98322511 98325478 0 3 214,179,802, 0,646,2165, +,+,+, 283799 LINE CR1 1335 chr2 98337618 98337671 A-rich 372 + 98337618 98337671 0 2 15,15, 0,38, +,+, 283810 Low_complexity Low_complexity 1335 chr2 98352154 98352275 A-rich 432 + 98352154 98352275 0 2 41,60, 0,61, +,+, 283820 Low_complexity Low_complexity 1337 chr2 98612307 98612868 CR1-L3B_Croc 273 - 98612307 98612868 0 2 132,333, 0,228, -,-, 283983 LINE CR1 1337 chr2 98618731 98619425 CR1-Y1_Aves 429 - 98618731 98619425 0 2 362,241, 0,453, -,-, 283988 LINE CR1 1337 chr2 98633492 98634444 CR1-Y2_Aves 116 + 98633492 98634444 0 2 574,172, 0,780, +,+, 283995 LINE CR1 1337 chr2 98650191 98650516 CR1-X2 631 + 98650191 98650516 0 2 116,205, 0,120, +,+, 284001 LINE CR1 1338 chr2 98739370 98739938 CR1-D2 506 - 98739370 98739938 0 2 501,63, 0,505, -,-, 284062 LINE CR1 1338 chr2 98770030 98771118 CR1-X 599 - 98770030 98771118 0 2 970,118, 0,970, -,-, 284079 LINE CR1 1339 chr2 98892577 98893145 CR1-Y3 699 - 98892577 98893145 0 2 34,277, 0,291, -,-, 284145 LINE CR1 1339 chr2 98926893 98928123 CR1-C4 583 + 98926893 98928123 0 2 524,706, 0,524, +,+, 284167 LINE CR1 1341 chr2 99169908 99170219 Char12Mar1_GG 742 - 99169908 99170219 0 2 271,34, 0,277, -,-, 284302 DNA hAT-Charlie 1341 chr2 99205896 99210050 CR1-C4 261 - 99205896 99210050 0 2 158,271, 0,3883, -,-, 284314 LINE CR1 1342 chr2 99323679 99323725 (ATAC)n 270 + 99323679 99323725 0 2 9,6, 0,40, +,+, 284367 Simple_repeat Simple_repeat 1343 chr2 99353912 99354031 CR1-F2 601 + 99353912 99354031 0 2 72,42, 0,77, +,+, 284380 LINE CR1 1343 chr2 99450443 99451515 CR1-Y2_Aves 312 - 99450443 99451515 0 2 243,637, 0,435, -,-, 284433 LINE CR1 1344 chr2 99524631 99527704 CR1-Y1_Aves 413 - 99524631 99527704 0 3 83,718,564, 0,995,2509, -,-,-, 284472 LINE CR1 1344 chr2 99599841 99600615 CR1-F2 342 + 99599841 99600615 0 2 163,212, 0,562, +,+, 284509 LINE CR1 1345 chr2 99652250 99653118 CR1-C4 528 - 99652250 99653118 0 2 347,521, 0,347, -,-, 284544 LINE CR1 1345 chr2 99703174 99703298 (AT)n 784 + 99703174 99703298 0 2 28,79, 0,45, +,+, 284573 Simple_repeat Simple_repeat 1346 chr2 99843431 99844600 CR1-C4 539 - 99843431 99844600 0 2 877,155, 0,1014, -,-, 284660 LINE CR1 1346 chr2 99855028 99855586 CR1-Y4 614 + 99855028 99855586 0 2 484,74, 0,484, +,+, 284666 LINE CR1 1347 chr2 99895039 99895938 CR1-D 657 - 99895039 99895938 0 2 619,280, 0,619, -,-, 284685 LINE CR1 1347 chr2 99983624 99983982 GGLTR4B 600 + 99983624 99983982 0 2 231,99, 0,259, +,+, 284733 LTR ERVL 1348 chr2 100066575 100067023 CR1-Y2_Aves 274 + 100066575 100067023 0 2 180,174, 0,274, +,+, 284789 LINE CR1 1348 chr2 100123927 100124345 CR1-Y4 597 - 100123927 100124345 0 2 132,286, 0,132, -,-, 284828 LINE CR1 1350 chr2 100276387 100277460 CR1-Y2_Aves 81 + 100276387 100277460 0 2 250,257, 0,816, +,+, 284904 LINE CR1 1351 chr2 100434258 100434684 Char12Mar1_GG 675 - 100434258 100434684 0 2 322,103, 0,323, -,-, 285002 DNA hAT-Charlie 1351 chr2 100529081 100529923 CR1-D2 733 + 100529081 100529923 0 2 74,220, 0,622, +,+, 285081 LINE CR1 1352 chr2 100560435 100561020 CR1-Y2_Aves 102 - 100560435 100561020 0 2 382,176, 0,409, -,-, 285100 LINE CR1 1352 chr2 100633053 100633532 CR1-L3A_Croc 336 + 100633053 100633532 0 2 63,207, 0,272, +,+, 285137 LINE CR1 1352 chr2 100648283 100648762 CR1-L3A_Croc 332 + 100648283 100648762 0 2 63,207, 0,272, +,+, 285147 LINE CR1 1353 chr2 100672971 100674419 CR1-D 768 - 100672971 100674419 0 2 629,818, 0,630, -,-, 285166 LINE CR1 1353 chr2 100718292 100720147 Mariner1_GG 588 - 100718292 100720147 0 2 779,471, 0,1384, -,-, 285208 DNA TcMar-Mariner 1353 chr2 100719059 100719724 CR1-F2 441 - 100719059 100719724 0 2 298,367, 0,298, -,-, 285209 LINE CR1 1353 chr2 100724162 100725417 CR1-C4 666 - 100724162 100725417 0 2 883,372, 0,883, -,-, 285214 LINE CR1 1354 chr2 100819336 100819935 CR1-X2 502 + 100819336 100819935 0 2 381,168, 0,431, +,+, 285287 LINE CR1 1354 chr2 100874271 100874647 CR1-X2 580 - 100874271 100874647 0 2 287,80, 0,296, -,-, 285321 LINE CR1 1354 chr2 100888986 100889317 Mariner1b_GG 760 - 100888986 100889317 0 2 298,33, 0,298, -,-, 285327 DNA TcMar-Mariner 1354 chr2 100891331 100891970 CR1-H2 607 - 100891331 100891970 0 2 506,133, 0,506, -,-, 285332 LINE CR1 1355 chr2 100936872 100937167 CR1-F2 683 + 100936872 100937167 0 2 138,157, 0,138, +,+, 285365 LINE CR1 1355 chr2 101015544 101019609 CR1-F2 433 - 101015544 101019609 0 2 390,108, 0,3957, -,-, 285413 LINE CR1 1356 chr2 101179332 101179823 CR1-C4 613 + 101179332 101179823 0 2 208,218, 0,273, +,+, 285533 LINE CR1 1357 chr2 101268554 101269788 CR1-F2 579 + 101268554 101269788 0 3 124,119,978, 0,135,256, +,+,+, 285588 LINE CR1 1358 chr2 101333896 101334261 CR1-C4 736 + 101333896 101334261 0 2 114,250, 0,115, +,+, 285624 LINE CR1 1358 chr2 101373444 101374055 GGLTR5B 711 - 101373444 101374055 0 2 53,299, 0,312, -,-, 285649 LTR ERVL 1358 chr2 101390745 101391625 CR1-F2 299 - 101390745 101391625 0 3 437,134,147, 0,437,733, -,-,-, 285656 LINE CR1 1358 chr2 101391625 101392278 GGLTR8A 257 + 101391625 101392278 0 2 123,350, 0,303, +,+, 285658 LTR ERVL 1358 chr2 101436474 101437247 GGERVL-C-int 608 + 101436474 101437247 0 2 653,120, 0,653, +,+, 285687 LTR ERVL 1358 chr2 101438053 101438711 GGLTR11-int 457 + 101438053 101438711 0 2 121,219, 0,439, +,+, 285689 LTR ERV1 1359 chr2 101460866 101461830 CR1-C4 625 - 101460866 101461830 0 2 138,600, 0,364, -,-, 285705 LINE CR1 1359 chr2 101465033 101465465 TguLTR5e 342 + 101465033 101465465 0 2 61,193, 0,239, +,+, 285709 LTR ERVL 1359 chr2 101507914 101509292 CR1-D 743 + 101507914 101509292 0 2 589,789, 0,589, +,+, 285736 LINE CR1 1359 chr2 101535655 101536027 GGLTR8B 394 + 101535655 101536027 0 2 107,168, 0,204, +,+, 285751 LTR ERVL 1359 chr2 101573899 101574840 CR1-C4 683 + 101573899 101574840 0 2 65,873, 0,68, +,+, 285776 LINE CR1 1360 chr2 101596952 101598332 CR1-Y2_Aves 325 - 101596952 101598332 0 2 778,426, 0,954, -,-, 285789 LINE CR1 1360 chr2 101599520 101600540 CR1-D2 706 - 101599520 101600540 0 2 863,157, 0,863, -,-, 285791 LINE CR1 1361 chr2 101738797 101742656 CR1-G 365 + 101738797 101742656 0 3 252,1116,333, 0,322,3526, +,+,+, 285896 LINE CR1 1361 chr2 101742658 101743742 CR1-F2 501 - 101742658 101743742 0 2 468,173, 0,911, -,-, 285898 LINE CR1 1361 chr2 101808762 101808844 (GTTT)n 372 + 101808762 101808844 0 2 15,14, 0,68, +,+, 285950 Simple_repeat Simple_repeat 1361 chr2 101826907 101827640 CR1-Y1_Aves 537 - 101826907 101827640 0 2 643,90, 0,643, -,-, 285963 LINE CR1 1361 chr2 101829493 101832170 CR1-C2 683 + 101829493 101832170 0 3 1219,215,552, 0,1553,2125, +,+,+, 285970 LINE CR1 1362 chr2 101876116 101876981 GGERVL-C-int 238 + 101876116 101876981 0 2 349,237, 0,628, +,+, 286002 LTR ERVL 1362 chr2 101939268 101940060 CR1-H 800 + 101939268 101940060 0 2 670,16, 0,776, +,+, 286051 LINE CR1 1362 chr2 101945465 101945597 (CTTCC)n 486 + 101945465 101945597 0 2 16,25, 0,107, +,+, 286054 Simple_repeat Simple_repeat 1362 chr2 101954121 101955339 CR1-D2 642 + 101954121 101955339 0 2 265,953, 0,265, +,+, 286064 LINE CR1 1363 chr2 101986415 101987228 CR1-D2 610 + 101986415 101987228 0 2 77,736, 0,77, +,+, 286095 LINE CR1 1363 chr2 102080083 102080974 CR1-Y3 528 - 102080083 102080974 0 2 150,737, 0,154, -,-, 286155 LINE CR1 1363 chr2 102092006 102092565 CR1-F2 606 + 102092006 102092565 0 2 494,63, 0,496, +,+, 286165 LINE CR1 1364 chr2 102121166 102121227 (GTTT)n 398 + 102121166 102121227 0 2 21,21, 0,40, +,+, 286188 Simple_repeat Simple_repeat 1364 chr2 102177328 102177388 (TTGT)n 514 + 102177328 102177388 0 2 7,11, 0,49, +,+, 286237 Simple_repeat Simple_repeat 1365 chr2 102254825 102256294 Char12Mar1_GG 572 - 102254825 102256294 0 2 1162,252, 0,1217, -,-, 286280 DNA hAT-Charlie 1365 chr2 102264270 102265398 CR1-D 733 - 102264270 102265398 0 2 678,236, 0,892, -,-, 286287 LINE CR1 1366 chr2 102438982 102439653 CR1-Y2_Aves 338 - 102438982 102439653 0 2 191,345, 0,326, -,-, 286406 LINE CR1 1366 chr2 102462948 102463030 (GGC)n 276 + 102462948 102463030 0 2 43,14, 0,68, +,+, 286420 Simple_repeat Simple_repeat 1366 chr2 102480004 102480478 CR1-Y1_Aves 332 + 102480004 102480478 0 2 322,152, 0,322, +,+, 286427 LINE CR1 1367 chr2 102508317 102509316 CR1-Y2_Aves 245 - 102508317 102509316 0 3 112,137,243, 0,367,756, -,-,-, 286434 LINE CR1 1367 chr2 102521815 102522483 CR1-Y2_Aves 213 + 102521815 102522483 0 2 150,390, 0,278, +,+, 286445 LINE CR1 1367 chr2 102573170 102573274 (A)n 840 + 102573170 102573274 0 2 22,29, 0,75, +,+, 286478 Simple_repeat Simple_repeat 1368 chr2 102684423 102685342 CR1-E 652 - 102684423 102685342 0 2 748,171, 0,748, -,-, 286524 LINE CR1 1368 chr2 102752433 102753981 CR1-Y2_Aves 188 + 102752433 102753981 0 2 174,1184, 0,364, +,+, 286552 LINE CR1 1369 chr2 102770232 102770874 CR1-Y1_Aves 512 - 102770232 102770874 0 2 180,423, 0,219, -,-, 286566 LINE CR1 1370 chr2 102900287 102900403 (TCTTTCT)n 678 + 102900287 102900403 0 2 30,14, 0,102, +,+, 286646 Simple_repeat Simple_repeat 1370 chr2 102986763 102986843 (TCTTTT)n 650 + 102986763 102986843 0 2 6,28, 0,52, +,+, 286710 Simple_repeat Simple_repeat 1372 chr2 103253341 103253596 CR1-C4 696 + 103253341 103253596 0 2 93,162, 0,93, +,+, 286853 LINE CR1 1372 chr2 103263693 103264120 CR1-D2 803 - 103263693 103264120 0 2 392,35, 0,392, -,-, 286864 LINE CR1 171 chr2 103283771 103285803 CR1-Y2_Aves 290 - 103283771 103285803 0 3 83,332,284, 0,1037,1748, -,-,-, 286872 LINE CR1 1373 chr2 103342425 103342936 GGLTR5A 274 - 103342425 103342936 0 2 145,355, 0,156, -,-, 286903 LTR ERVL 1374 chr2 103445530 103446979 CR1-Y2_Aves 112 - 103445530 103446979 0 2 408,397, 0,1052, -,-, 286942 LINE CR1 1374 chr2 103483787 103484330 CR1-C4 488 + 103483787 103484330 0 2 325,216, 0,327, +,+, 286955 LINE CR1 1375 chr2 103566777 103567382 CR1-C 892 - 103566777 103567382 0 2 117,488, 0,117, -,-, 286994 LINE CR1 1375 chr2 103591530 103591895 TguLTR5e 376 - 103591530 103591895 0 2 144,89, 0,276, -,-, 287002 LTR ERVL 1376 chr2 103730924 103732410 GGERVL18-int 535 - 103730924 103732410 0 3 310,178,998, 0,310,488, -,-,-, 287075 LTR ERVL 1377 chr2 103874979 103875223 LFSINE_Vert 404 + 103874979 103875223 0 2 108,93, 0,151, +,+, 287168 SINE tRNA 1378 chr2 104020347 104020412 (TTTA)n 330 + 104020347 104020412 0 2 19,16, 0,49, +,+, 287237 Simple_repeat Simple_repeat 1379 chr2 104073619 104074213 REP131 155 - 104073619 104074213 0 2 163,208, 0,386, -,-, 287258 DNA? DNA? 1380 chr2 104247263 104247972 CR1-F2 555 + 104247263 104247972 0 2 524,185, 0,524, +,+, 287379 LINE CR1 1380 chr2 104272467 104273575 CR1-11_Crp 287 - 104272467 104273575 0 3 212,127,129, 0,505,979, -,-,-, 287393 LINE CR1 1381 chr2 104407417 104408608 Mariner1_GG 612 - 104407417 104408608 0 2 262,929, 0,262, -,-, 287462 DNA TcMar-Mariner 1381 chr2 104428133 104430133 CR1-Y2_Aves 395 - 104428133 104430133 0 3 282,931,70, 0,311,1930, -,-,-, 287467 LINE CR1 1381 chr2 104457054 104457379 GGERV10_LTR 701 - 104457054 104457379 0 2 153,63, 0,262, -,-, 287491 LTR ERVL 1383 chr2 104613943 104614087 (CTC)n 730 + 104613943 104614087 0 2 42,79, 0,65, +,+, 287576 Simple_repeat Simple_repeat 1383 chr2 104674171 104674682 CR1-L3B_Croc 244 + 104674171 104674682 0 2 96,124, 0,387, +,+, 287621 LINE CR1 1383 chr2 104707254 104707978 GGERVL-A-int 144 - 104707254 104707978 0 2 248,155, 0,569, -,-, 287642 LTR ERVL 1384 chr2 104750163 104751149 CR1-L3B_Croc 97 - 104750163 104751149 0 2 463,471, 0,515, -,-, 287675 LINE CR1 1387 chr2 105240807 105242190 CR1-Y2_Aves 362 + 105240807 105242190 0 3 148,233,80, 0,173,1303, +,+,+, 287966 LINE CR1 1388 chr2 105270440 105271681 Char12Mar1_GG 508 - 105270440 105271681 0 2 1146,76, 0,1165, -,-, 287991 DNA hAT-Charlie 1389 chr2 105506845 105507298 Char12Mar1_GG 701 - 105506845 105507298 0 2 389,64, 0,389, -,-, 288152 DNA hAT-Charlie 1390 chr2 105531395 105533065 CR1-Y4 420 - 105531395 105533065 0 2 186,489, 0,1181, -,-, 288179 LINE CR1 1390 chr2 105543373 105543657 CR1-L3B_Croc 217 + 105543373 105543657 0 2 153,101, 0,183, +,+, 288195 LINE CR1 1390 chr2 105584631 105585896 CR1-Y4 492 - 105584631 105585896 0 2 67,259, 0,1006, -,-, 288230 LINE CR1 1390 chr2 105607654 105608299 GGLTR3E2 662 + 105607654 105608299 0 2 490,120, 0,525, +,+, 288243 LTR ERVL 1390 chr2 105611928 105612321 Mariner1b_GG 600 - 105611928 105612321 0 2 286,107, 0,286, -,-, 288251 DNA TcMar-Mariner 1391 chr2 105649176 105650578 CR1-C4 612 - 105649176 105650578 0 2 164,1235, 0,167, -,-, 288278 LINE CR1 1391 chr2 105682172 105684141 CR1-D 697 + 105682172 105684141 0 3 110,486,1042, 0,119,927, +,+,+, 288312 LINE CR1 1391 chr2 105698360 105699879 CR1-X2 548 - 105698360 105699879 0 2 540,380, 0,1139, -,-, 288323 LINE CR1 1391 chr2 105715888 105715967 (TGTATG)n 162 + 105715888 105715967 0 2 8,47, 0,32, +,+, 288336 Simple_repeat Simple_repeat 1391 chr2 105718973 105719308 GGLTR5A 394 + 105718973 105719308 0 2 142,126, 0,209, +,+, 288340 LTR ERVL 1391 chr2 105756130 105756514 TguLTR5d 405 + 105756130 105756514 0 2 127,81, 0,303, +,+, 288367 LTR ERVL 1391 chr2 105757676 105758141 CR1-G 877 + 105757676 105758141 0 2 365,91, 0,374, +,+, 288368 LINE CR1 1392 chr2 105777553 105777978 CR1-X 546 - 105777553 105777978 0 2 224,201, 0,224, -,-, 288383 LINE CR1 1392 chr2 105780907 105781332 CR1-X 546 - 105780907 105781332 0 2 224,201, 0,224, -,-, 288387 LINE CR1 1392 chr2 105784283 105784666 CR1-X 548 - 105784283 105784666 0 2 177,206, 0,177, -,-, 288392 LINE CR1 1392 chr2 105786829 105787198 CR1-X 522 - 105786829 105787198 0 2 172,197, 0,172, -,-, 288396 LINE CR1 1392 chr2 105791205 105791630 CR1-X 542 - 105791205 105791630 0 2 224,201, 0,224, -,-, 288401 LINE CR1 1392 chr2 105812363 105813053 CR1-H 687 + 105812363 105813053 0 3 522,46,92, 0,526,598, +,+,+, 288421 LINE CR1 1392 chr2 105845712 105846108 GGLTR5A 308 + 105845712 105846108 0 2 185,123, 0,273, +,+, 288449 LTR ERVL 1393 chr2 105931387 105933426 GGLTR5A 409 + 105931387 105933426 0 2 283,196, 0,1843, +,+, 288534 LTR ERVL 1393 chr2 105967780 105968092 CR1-L3B_Croc 276 - 105967780 105968092 0 2 115,86, 0,226, -,-, 288567 LINE CR1 1393 chr2 105983770 105984367 CR1-Y2_Aves 170 - 105983770 105984367 0 2 152,281, 0,316, -,-, 288581 LINE CR1 1394 chr2 106132351 106132934 CR1-F2 564 - 106132351 106132934 0 2 493,90, 0,493, -,-, 288713 LINE CR1 1394 chr2 106155785 106156162 CR1-X 574 + 106155785 106156162 0 2 205,172, 0,205, +,+, 288734 LINE CR1 1394 chr2 106159144 106159521 CR1-X 558 + 106159144 106159521 0 2 205,172, 0,205, +,+, 288738 LINE CR1 1394 chr2 106162483 106162858 CR1-X 479 + 106162483 106162858 0 2 200,175, 0,200, +,+, 288742 LINE CR1 1394 chr2 106165431 106165808 CR1-X 569 + 106165431 106165808 0 2 205,172, 0,205, +,+, 288745 LINE CR1 1395 chr2 106168790 106169167 CR1-X 569 + 106168790 106169167 0 2 205,172, 0,205, +,+, 288749 LINE CR1 1395 chr2 106172151 106172528 CR1-X 569 + 106172151 106172528 0 2 205,172, 0,205, +,+, 288753 LINE CR1 1395 chr2 106175511 106175888 CR1-X 569 + 106175511 106175888 0 2 205,172, 0,205, +,+, 288757 LINE CR1 1395 chr2 106195338 106196095 CR1-H 806 - 106195338 106196095 0 2 169,588, 0,169, -,-, 288779 LINE CR1 1396 chr2 106353992 106354085 (A)n 1000 + 106353992 106354085 0 2 17,17, 0,76, +,+, 288896 Simple_repeat Simple_repeat 1396 chr2 106427726 106428485 CR1-Y4 620 + 106427726 106428485 0 2 233,526, 0,233, +,+, 288953 LINE CR1 1397 chr2 106452819 106454494 CR1-D2 632 + 106452819 106454494 0 2 217,465, 0,1210, +,+, 288966 LINE CR1 1397 chr2 106512864 106512926 (AACA)n 520 + 106512864 106512926 0 2 9,23, 0,39, +,+, 289004 Simple_repeat Simple_repeat 1398 chr2 106618952 106619045 (AATTA)n 378 + 106618952 106619045 0 2 20,10, 0,83, +,+, 289075 Simple_repeat Simple_repeat 1398 chr2 106668477 106670422 CR1-L3B_Croc 210 - 106668477 106670422 0 3 117,179,175, 0,597,1770, -,-,-, 289101 LINE CR1 1399 chr2 106761081 106762162 CR1-X2 679 - 106761081 106762162 0 2 121,191, 0,890, -,-, 289157 LINE CR1 1399 chr2 106790471 106791186 CR1-L3A_Croc 99 - 106790471 106791186 0 2 188,112, 0,603, -,-, 289167 LINE CR1 1399 chr2 106799619 106800376 Char12Mar1_GG 690 - 106799619 106800376 0 2 197,374, 0,383, -,-, 289172 DNA hAT-Charlie 1400 chr2 106899048 106900198 CR1-C4 604 - 106899048 106900198 0 2 1047,103, 0,1047, -,-, 289237 LINE CR1 1400 chr2 106904328 106905198 CR1-Y1_Aves 373 - 106904328 106905198 0 2 153,492, 0,378, -,-, 289244 LINE CR1 1400 chr2 106905353 106905967 CR1-G 863 - 106905353 106905967 0 2 136,478, 0,136, -,-, 289246 LINE CR1 1401 chr2 107015417 107017057 CR1-L3A_Croc 254 + 107015417 107017057 0 2 400,443, 0,1197, +,+, 289312 LINE CR1 1402 chr2 107136030 107138496 Char12Mar1_GG 588 - 107136030 107138496 0 2 994,203, 0,2263, -,-, 289386 DNA hAT-Charlie 1402 chr2 107150005 107150724 CR1-C2 770 + 107150005 107150724 0 2 120,233, 0,486, +,+, 289394 LINE CR1 1402 chr2 107163615 107163685 (TC)n 368 + 107163615 107163685 0 2 30,6, 0,64, +,+, 289407 Simple_repeat Simple_repeat 1402 chr2 107196325 107201271 CR1-F2 543 - 107196325 107201271 0 2 335,96, 0,4850, -,-, 289443 LINE CR1 1403 chr2 107222505 107222575 (CCGCCC)n 450 + 107222505 107222575 0 2 9,6, 0,64, +,+, 289460 Simple_repeat Simple_repeat 1403 chr2 107231937 107235023 GGLTR8B 589 - 107231937 107235023 0 4 79,107,42,781, 0,409,1518,2305, -,-,-,-, 289467 LTR ERVL 1403 chr2 107232448 107233454 Char12Mar1_GG 642 - 107232448 107233454 0 2 145,400, 0,606, -,-, 289469 DNA hAT-Charlie 1403 chr2 107269391 107270521 CR1-Y2_Aves 190 + 107269391 107270521 0 2 476,241, 0,889, +,+, 289500 LINE CR1 1403 chr2 107276247 107276692 GGLTR5B 592 - 107276247 107276692 0 2 176,242, 0,203, -,-, 289506 LTR ERVL 1404 chr2 107372184 107372934 CR1-C4 557 - 107372184 107372934 0 2 246,159, 0,591, -,-, 289580 LINE CR1 1404 chr2 107394202 107394699 TguLTR5e 313 + 107394202 107394699 0 2 256,80, 0,417, +,+, 289597 LTR ERVL 1405 chr2 107500769 107502826 CR1-Y3 521 + 107500769 107502826 0 2 1349,708, 0,1349, +,+, 289658 LINE CR1 1405 chr2 107558217 107558286 (TTGT)n 448 + 107558217 107558286 0 2 6,21, 0,48, +,+, 289687 Simple_repeat Simple_repeat 1405 chr2 107606865 107607233 CR1-L3B_Croc 269 - 107606865 107607233 0 2 71,177, 0,191, -,-, 289737 LINE CR1 1406 chr2 107696620 107696680 (TG)n 472 + 107696620 107696680 0 2 15,16, 0,44, +,+, 289782 Simple_repeat Simple_repeat 1406 chr2 107728991 107729796 CR1-Y3 689 - 107728991 107729796 0 2 163,336, 0,469, -,-, 289799 LINE CR1 1406 chr2 107732303 107734760 CR1-C 782 + 107732303 107734760 0 3 648,1094,713, 0,650,1744, +,+,+, 289801 LINE CR1 1407 chr2 107751636 107752002 CR1-C4 478 - 107751636 107752002 0 2 101,258, 0,108, -,-, 289810 LINE CR1 1407 chr2 107776121 107776965 GGERVL-C-int 145 - 107776121 107776965 0 2 70,251, 0,593, -,-, 289816 LTR ERVL 1408 chr2 107937473 107937576 (GCGGCA)n 350 + 107937473 107937576 0 2 13,30, 0,73, +,+, 289891 Simple_repeat Simple_repeat 1409 chr2 108103551 108104674 CR1-C2 762 - 108103551 108104674 0 2 719,401, 0,722, -,-, 289975 LINE CR1 1409 chr2 108111836 108112883 CR1-L3B_Croc 304 - 108111836 108112883 0 2 487,108, 0,939, -,-, 289980 LINE CR1 1411 chr2 108313264 108313844 CR1-D2 684 - 108313264 108313844 0 2 444,134, 0,446, -,-, 290087 LINE CR1 1411 chr2 108343390 108344178 CR1-Y2_Aves 264 + 108343390 108344178 0 2 114,567, 0,221, +,+, 290100 LINE CR1 1411 chr2 108353119 108355065 GGLTR3B2 611 + 108353119 108355065 0 2 361,199, 0,1747, +,+, 290105 LTR ERVL 1411 chr2 108362168 108363423 CR1-D2 699 + 108362168 108363423 0 2 529,267, 0,988, +,+, 290117 LINE CR1 1413 chr2 108630167 108630285 (TTCC)n 176 + 108630167 108630285 0 2 55,23, 0,95, +,+, 290287 Simple_repeat Simple_repeat 1414 chr2 108784633 108784774 A-rich 436 + 108784633 108784774 0 2 44,78, 0,63, +,+, 290393 Low_complexity Low_complexity 1415 chr2 108800789 108801253 CR1-D2 638 + 108800789 108801253 0 2 406,58, 0,406, +,+, 290410 LINE CR1 1415 chr2 108831861 108846091 Char12Mar1_GG 512 - 108831861 108846091 0 2 45,76, 0,14154, -,-, 290427 DNA hAT-Charlie 1415 chr2 108853892 108854518 GGLTR12B 744 - 108853892 108854518 0 2 46,542, 0,84, -,-, 290446 LTR ERVL 1415 chr2 108866177 108868438 CR1-C4 617 - 108866177 108868438 0 3 338,669,1254, 0,338,1007, -,-,-, 290457 LINE CR1 1415 chr2 108877646 108877739 (T)n 1000 + 108877646 108877739 0 2 26,30, 0,63, +,+, 290465 Simple_repeat Simple_repeat 1415 chr2 108898645 108900466 GGLTR8B 609 + 108898645 108900466 0 2 200,91, 0,1730, +,+, 290483 LTR ERVL 1415 chr2 108901116 108901375 GGLTR9 525 + 108901116 108901375 0 2 87,158, 0,101, +,+, 290486 LTR ERVL 1416 chr2 108921067 108922911 CR1-C4 440 - 108921067 108922911 0 2 277,184, 0,1660, -,-, 290509 LINE CR1 1416 chr2 108926694 108927353 CR1-Y4 517 - 108926694 108927353 0 2 384,275, 0,384, -,-, 290513 LINE CR1 1416 chr2 108945682 108946718 GGLTR3A 677 + 108945682 108946718 0 2 680,356, 0,680, +,+, 290529 LTR ERVL 1416 chr2 108950692 108951999 CR1-C 848 + 108950692 108951999 0 2 799,148, 0,1159, +,+, 290533 LINE CR1 1416 chr2 108952117 108952831 GGLTR5A 302 + 108952117 108952831 0 2 85,290, 0,424, +,+, 290534 LTR ERVL 1416 chr2 108958228 108959219 CR1-Y1_Aves 495 + 108958228 108959219 0 2 139,318, 0,673, +,+, 290540 LINE CR1 1416 chr2 108991396 108992641 GGERVL-C-int 805 - 108991396 108992641 0 2 522,723, 0,522, -,-, 290566 LTR ERVL 1416 chr2 109028286 109029741 GGLTR5A 463 + 109028286 109029741 0 3 137,261,122, 0,930,1333, +,+,+, 290587 LTR ERVL 1417 chr2 109075134 109076753 CR1-D2 581 - 109075134 109076753 0 3 465,79,624, 0,465,995, -,-,-, 290629 LINE CR1 1417 chr2 109117311 109117386 (T)n 1000 + 109117311 109117386 0 2 19,17, 0,58, +,+, 290657 Simple_repeat Simple_repeat 1417 chr2 109144115 109145503 GGERVL-B-int 463 + 109144115 109145503 0 2 288,1091, 0,297, +,+, 290673 LTR ERVL 1417 chr2 109163211 109166799 CR1-X 543 - 109163211 109166799 0 2 1220,674, 0,2914, -,-, 290686 LINE CR1 1417 chr2 109164425 109166156 CR1-F2 519 - 109164425 109166156 0 2 96,1635, 0,96, -,-, 290687 LINE CR1 1418 chr2 109244467 109244562 (ATTTTTT)n 294 + 109244467 109244562 0 2 31,42, 0,53, +,+, 290747 Simple_repeat Simple_repeat 1418 chr2 109245709 109245981 CR1-C4 571 - 109245709 109245981 0 2 206,51, 0,221, -,-, 290750 LINE CR1 1418 chr2 109283935 109284308 CR1-D2 584 + 109283935 109284308 0 2 71,262, 0,111, +,+, 290782 LINE CR1 1419 chr2 109374172 109376348 CR1-D 630 - 109374172 109376348 0 3 1455,241,477, 0,1455,1699, -,-,-, 290847 LINE CR1 1419 chr2 109386886 109386975 (GTT)n 480 + 109386886 109386975 0 2 11,38, 0,51, +,+, 290855 Simple_repeat Simple_repeat 1419 chr2 109409886 109410372 CR1-F2 533 - 109409886 109410372 0 2 184,285, 0,201, -,-, 290873 LINE CR1 1419 chr2 109440607 109441548 CR1-11_Crp 314 - 109440607 109441548 0 2 382,115, 0,826, -,-, 290895 LINE CR1 1420 chr2 109536117 109536870 GGLTR12C 587 - 109536117 109536870 0 2 240,113, 0,640, -,-, 290979 LTR ERVL 1420 chr2 109566489 109566533 (TTGTT)n 504 + 109566489 109566533 0 2 10,10, 0,34, +,+, 291009 Simple_repeat Simple_repeat 1420 chr2 109574814 109575126 CR1-D 721 + 109574814 109575126 0 2 116,196, 0,116, +,+, 291018 LINE CR1 177 chr2 109575705 109576495 CR1-D 665 + 109575705 109576495 0 2 461,293, 0,497, +,+, 291020 LINE CR1 1421 chr2 109581836 109582648 ENS1B-LTR 458 + 109581836 109582648 0 3 131,196,82, 0,534,730, +,+,+, 291028 LTR ERVL 1421 chr2 109584684 109585298 CR1-F 866 - 109584684 109585298 0 2 239,354, 0,260, -,-, 291033 LINE CR1 1421 chr2 109593344 109593931 CR1-X2 563 - 109593344 109593931 0 2 420,160, 0,427, -,-, 291041 LINE CR1 1421 chr2 109600924 109601034 (TTATAT)n 282 + 109600924 109601034 0 2 73,7, 0,103, +,+, 291050 Simple_repeat Simple_repeat 1421 chr2 109655499 109655969 GGLTR5B 353 - 109655499 109655969 0 2 382,69, 0,401, -,-, 291087 LTR ERVL 1421 chr2 109684018 109684722 CR1-X2 490 - 109684018 109684722 0 2 48,514, 0,190, -,-, 291113 LINE CR1 1422 chr2 109718561 109718631 A-rich 384 + 109718561 109718631 0 2 24,17, 0,53, +,+, 291140 Low_complexity Low_complexity 1422 chr2 109719450 109720060 CR1-D2 613 - 109719450 109720060 0 2 189,415, 0,195, -,-, 291143 LINE CR1 1422 chr2 109724926 109725105 GGERV21_LTR 626 + 109724926 109725105 0 2 90,83, 0,96, +,+, 291151 LTR ERVL 1422 chr2 109732742 109734877 CR1-D2 562 + 109732742 109734877 0 2 1063,127, 0,2008, +,+, 291158 LINE CR1 1422 chr2 109746532 109746633 (T)n 824 + 109746532 109746633 0 2 18,32, 0,69, +,+, 291170 Simple_repeat Simple_repeat 1422 chr2 109768791 109769732 CR1-E 426 + 109768791 109769732 0 2 220,721, 0,220, +,+, 291182 LINE CR1 1423 chr2 109883171 109886519 GGLTR10B 945 + 109883171 109886519 0 3 377,2585,381, 0,379,2967, +,+,+, 291250 LTR ERVK 1424 chr2 109976463 109976869 Char12Mar1_GG 678 - 109976463 109976869 0 2 128,278, 0,128, -,-, 291321 DNA hAT-Charlie 1424 chr2 109986586 109986997 Char12Mar1_GG 673 - 109986586 109986997 0 2 133,278, 0,133, -,-, 291330 DNA hAT-Charlie 1425 chr2 110147460 110148126 CR1-Y2_Aves 380 + 110147460 110148126 0 2 174,392, 0,274, +,+, 291446 LINE CR1 1425 chr2 110175975 110179349 GGLTR10D 939 - 110175975 110179349 0 3 346,2682,346, 0,346,3028, -,-,-, 291467 LTR ERVK 1427 chr2 110380106 110380408 GGLTR5A 292 - 110380106 110380408 0 2 107,115, 0,187, -,-, 291599 LTR ERVL 1427 chr2 110391162 110391678 CR1-Y4 500 - 110391162 110391678 0 3 346,44,124, 0,346,392, -,-,-, 291609 LINE CR1 1427 chr2 110430216 110431092 Char12Mar1_GG 548 - 110430216 110431092 0 2 66,464, 0,412, -,-, 291645 DNA hAT-Charlie 1427 chr2 110457428 110457753 CR1-C4 616 + 110457428 110457753 0 2 201,69, 0,256, +,+, 291665 LINE CR1 1428 chr2 110554724 110554854 A-rich 586 + 110554724 110554854 0 2 36,36, 0,94, +,+, 291729 Low_complexity Low_complexity 1428 chr2 110589199 110589927 CR1-C4 548 - 110589199 110589927 0 2 208,519, 0,209, -,-, 291751 LINE CR1 1429 chr2 110708616 110709149 CR1-Y4 693 - 110708616 110709149 0 2 300,228, 0,305, -,-, 291810 LINE CR1 1430 chr2 110807313 110807951 CR1-Y 713 + 110807313 110807951 0 2 263,375, 0,263, +,+, 291865 LINE CR1 1430 chr2 110872646 110873480 CR1-Y1_Aves 509 - 110872646 110873480 0 2 153,246, 0,588, -,-, 291912 LINE CR1 1430 chr2 110872758 110873235 CR1-X 625 + 110872758 110873235 0 3 226,112,48, 0,317,429, +,+,+, 291913 LINE CR1 1430 chr2 110883343 110884451 CR1-L3A_Croc 98 - 110883343 110884451 0 2 668,189, 0,919, -,-, 291922 LINE CR1 1431 chr2 110985614 110986635 CR1-Y2_Aves 346 - 110985614 110986635 0 2 249,50, 0,971, -,-, 291984 LINE CR1 1432 chr2 111068863 111068945 (TATT)n 230 + 111068863 111068945 0 2 38,20, 0,62, +,+, 292036 Simple_repeat Simple_repeat 1432 chr2 111072549 111073223 CR1-Y1_Aves 272 + 111072549 111073223 0 2 455,177, 0,497, +,+, 292039 LINE CR1 1432 chr2 111093262 111095710 CR1-C4 415 + 111093262 111095710 0 3 370,1663,404, 0,381,2044, +,+,+, 292054 LINE CR1 1432 chr2 111102396 111102735 CR1-Y1_Aves 331 - 111102396 111102735 0 2 54,285, 0,54, -,-, 292060 LINE CR1 1432 chr2 111104796 111107250 CR1-C4 409 + 111104796 111107250 0 2 2037,417, 0,2037, +,+, 292064 LINE CR1 22 chr2 111143865 111149423 GGERVL-C-int 567 + 111143865 111149423 0 4 563,1078,15,971, 0,564,2366,4587, +,+,+,+, 292089 LTR ERVL 1432 chr2 111148163 111148434 GGLTR3B1 696 + 111148163 111148434 0 2 60,210, 0,61, +,+, 292091 LTR ERVL 1433 chr2 111157912 111157981 (GTTTTGTT)n 446 + 111157912 111157981 0 2 7,17, 0,52, +,+, 292095 Simple_repeat Simple_repeat 1433 chr2 111196906 111196976 (CATATA)n 370 + 111196906 111196976 0 2 19,20, 0,50, +,+, 292124 Simple_repeat Simple_repeat 1433 chr2 111224828 111224955 (AT)n 657 + 111224828 111224955 0 2 51,48, 0,79, +,+, 292140 Simple_repeat Simple_repeat 1434 chr2 111377543 111378295 CR1-Y2_Aves 244 - 111377543 111378295 0 2 167,431, 0,321, -,-, 292213 LINE CR1 1434 chr2 111392891 111393463 CR1-Y2_Aves 458 - 111392891 111393463 0 2 72,463, 0,109, -,-, 292222 LINE CR1 1436 chr2 111544965 111545010 (ACAT)n 454 + 111544965 111545010 0 2 12,9, 0,36, +,+, 292311 Simple_repeat Simple_repeat 1436 chr2 111563918 111565181 CR1-L3A_Croc 295 - 111563918 111565181 0 2 648,77, 0,1186, -,-, 292323 LINE CR1 1436 chr2 111569628 111570628 CR1-C4 646 - 111569628 111570628 0 2 121,553, 0,447, -,-, 292325 LINE CR1 1436 chr2 111590203 111590325 (ACAA)n 352 + 111590203 111590325 0 2 33,10, 0,112, +,+, 292339 Simple_repeat Simple_repeat 1437 chr2 111763071 111763911 CR1-Y2_Aves 431 - 111763071 111763911 0 2 11,169, 0,671, -,-, 292445 LINE CR1 1437 chr2 111775049 111775483 CR1-C4 580 + 111775049 111775483 0 2 143,291, 0,143, +,+, 292451 LINE CR1 1438 chr2 111815480 111815570 (CTTT)n 400 + 111815480 111815570 0 2 24,29, 0,61, +,+, 292472 Simple_repeat Simple_repeat 1438 chr2 111832204 111833032 CR1-F2 537 - 111832204 111833032 0 2 105,404, 0,424, -,-, 292476 LINE CR1 1439 chr2 111939789 111940144 CR1-Y3 721 - 111939789 111940144 0 2 215,140, 0,215, -,-, 292549 LINE CR1 1439 chr2 112058554 112059859 CR1-F2 619 - 112058554 112059859 0 2 757,207, 0,1098, -,-, 292615 LINE CR1 1440 chr2 112103919 112104044 (TTTGC)n 644 + 112103919 112104044 0 2 59,24, 0,101, +,+, 292644 Simple_repeat Simple_repeat 1440 chr2 112163459 112164320 CR1-11_Crp 149 + 112163459 112164320 0 2 322,475, 0,386, +,+, 292685 LINE CR1 1441 chr2 112268532 112269027 CR1-H 909 + 112268532 112269027 0 2 60,435, 0,60, +,+, 292726 LINE CR1 1441 chr2 112296779 112304579 CR1-Y4 689 + 112296779 112304579 0 2 237,654, 0,7146, +,+, 292743 LINE CR1 1442 chr2 112344320 112345074 TguLTR5e 456 + 112344320 112345074 0 2 258,108, 0,646, +,+, 292764 LTR ERVL 1442 chr2 112349425 112350424 CR1-F2 634 - 112349425 112350424 0 2 809,190, 0,809, -,-, 292768 LINE CR1 1442 chr2 112358178 112359274 CR1-X2 243 - 112358178 112359274 0 2 277,806, 0,290, -,-, 292772 LINE CR1 1442 chr2 112383088 112383616 CR1-X2 618 + 112383088 112383616 0 2 383,40, 0,488, +,+, 292784 LINE CR1 1443 chr2 112531560 112533196 Chompy-6_Croc 313 - 112531560 112533196 0 2 251,54, 0,1582, -,-, 292884 DNA PIF-Harbinger 1443 chr2 112559739 112560296 GGLTR5A 323 - 112559739 112560296 0 2 141,380, 0,177, -,-, 292899 LTR ERVL 1444 chr2 112620109 112621839 CR1-X2 563 + 112620109 112621839 0 2 856,861, 0,869, +,+, 292925 LINE CR1 1444 chr2 112630866 112631308 CR1-X 708 - 112630866 112631308 0 2 52,51, 0,391, -,-, 292927 LINE CR1 1444 chr2 112660623 112662535 CR1-L3B_Croc 145 + 112660623 112662535 0 3 164,223,122, 0,901,1790, +,+,+, 292949 LINE CR1 1445 chr2 112804467 112806255 CR1-H 773 - 112804467 112806255 0 2 1723,57, 0,1731, -,-, 293034 LINE CR1 1445 chr2 112827673 112828431 GGLTR8B 507 - 112827673 112828431 0 2 578,180, 0,578, -,-, 293047 LTR ERVL 1445 chr2 112832016 112833423 CR1-X2 508 + 112832016 112833423 0 2 299,299, 0,1108, +,+, 293054 LINE CR1 1445 chr2 112844140 112847891 CR1-C4 495 - 112844140 112847891 0 4 933,1126,293,118, 0,933,3224,3633, -,-,-,-, 293066 LINE CR1 1446 chr2 112894897 112895454 Penelope1_Vert 255 - 112894897 112895454 0 2 272,217, 0,340, -,-, 293110 LINE Penelope 1446 chr2 112928944 112930011 CR1-F2 446 + 112928944 112930011 0 2 823,244, 0,823, +,+, 293138 LINE CR1 1448 chr2 113116176 113117669 CR1-Y1_Aves 516 + 113116176 113117669 0 2 270,70, 0,1423, +,+, 293263 LINE CR1 1448 chr2 113117756 113118590 CR1-G 587 - 113117756 113118590 0 2 346,470, 0,364, -,-, 293266 LINE CR1 1448 chr2 113123686 113125347 CR1-L3B_Croc 171 - 113123686 113125347 0 2 350,845, 0,816, -,-, 293271 LINE CR1 1448 chr2 113132763 113133951 CR1-Y2_Aves 273 - 113132763 113133951 0 2 207,961, 0,227, -,-, 293277 LINE CR1 1448 chr2 113240144 113240329 G-rich 516 + 113240144 113240329 0 2 108,31, 0,154, +,+, 293338 Low_complexity Low_complexity 1450 chr2 113455035 113455199 REP131 400 - 113455035 113455199 0 2 67,83, 0,81, -,-, 293457 DNA? DNA? 1451 chr2 113616803 113618666 CR1-D2 544 - 113616803 113618666 0 2 942,241, 0,1622, -,-, 293567 LINE CR1 1451 chr2 113619625 113620232 CR1-Y2_Aves 100 - 113619625 113620232 0 2 239,310, 0,297, -,-, 293570 LINE CR1 1454 chr2 113914963 113915355 CR1-F2 601 + 113914963 113915355 0 2 102,290, 0,102, +,+, 293744 LINE CR1 1454 chr2 113940334 113941398 CR1-Y2_Aves 313 - 113940334 113941398 0 2 354,649, 0,415, -,-, 293762 LINE CR1 1454 chr2 113964249 113964310 A-rich 474 + 113964249 113964310 0 2 13,31, 0,30, +,+, 293777 Low_complexity Low_complexity 1454 chr2 113989858 113990162 Chompy-7_Croc 74 - 113989858 113990162 0 2 235,25, 0,279, -,-, 293798 DNA PIF-Harbinger 1454 chr2 114015530 114016605 CR1-L3B_Croc 206 - 114015530 114016605 0 2 387,204, 0,871, -,-, 293814 LINE CR1 1454 chr2 114020430 114021121 GGLTR5B 391 + 114020430 114021121 0 2 358,142, 0,549, +,+, 293817 LTR ERVL 1454 chr2 114027435 114027889 GGLTR5A 363 - 114027435 114027889 0 2 97,271, 0,183, -,-, 293822 LTR ERVL 1455 chr2 114034976 114037813 CR1-D 735 + 114034976 114037813 0 2 896,1145, 0,1692, +,+, 293828 LINE CR1 1455 chr2 114113539 114114672 CR1-E 756 - 114113539 114114672 0 2 526,607, 0,526, -,-, 293881 LINE CR1 1457 chr2 114334332 114334937 Mariner1b_GG 683 - 114334332 114334937 0 2 198,366, 0,239, -,-, 294005 DNA TcMar-Mariner 1457 chr2 114347056 114348203 CR1-Y2 352 - 114347056 114348203 0 2 809,328, 0,819, -,-, 294016 LINE CR1 1457 chr2 114363747 114366758 CR1-F2 553 + 114363747 114366758 0 3 947,1457,578, 0,972,2433, +,+,+, 294026 LINE CR1 1457 chr2 114387418 114389351 CR1-D 705 - 114387418 114389351 0 2 199,1074, 0,859, -,-, 294045 LINE CR1 1457 chr2 114391368 114391900 CR1-C4 658 + 114391368 114391900 0 2 333,130, 0,402, +,+, 294047 LINE CR1 1457 chr2 114409053 114409435 CR1-X2 590 - 114409053 114409435 0 2 295,87, 0,295, -,-, 294056 LINE CR1 1458 chr2 114471057 114471888 GGLTR8A 388 + 114471057 114471888 0 2 695,135, 0,696, +,+, 294107 LTR ERVL 1458 chr2 114486691 114487245 CR1-E 812 - 114486691 114487245 0 2 291,187, 0,367, -,-, 294120 LINE CR1 1458 chr2 114527374 114528553 CR1-C4 476 + 114527374 114528553 0 2 863,316, 0,863, +,+, 294150 LINE CR1 1459 chr2 114597407 114598449 CR1-F2 544 + 114597407 114598449 0 2 923,90, 0,952, +,+, 294191 LINE CR1 1459 chr2 114624389 114628346 CR1-Y1_Aves 483 - 114624389 114628346 0 3 115,374,646, 0,2638,3311, -,-,-, 294208 LINE CR1 1460 chr2 114735255 114735775 CR1-Y2_Aves 482 + 114735255 114735775 0 2 172,348, 0,172, +,+, 294294 LINE CR1 1460 chr2 114759848 114761341 CR1-Y2_Aves 121 + 114759848 114761341 0 2 957,533, 0,960, +,+, 294310 LINE CR1 1460 chr2 114762193 114765952 CR1-Y2_Aves 303 + 114762193 114765952 0 2 1359,323, 0,3436, +,+, 294312 LINE CR1 1461 chr2 114833890 114835973 CR1-F 505 - 114833890 114835973 0 2 1890,193, 0,1890, -,-, 294377 LINE CR1 1462 chr2 114994096 114994420 CR1-Y4 531 - 114994096 114994420 0 2 216,108, 0,216, -,-, 294475 LINE CR1 1462 chr2 114998254 114998316 (CTTT)n 466 + 114998254 114998316 0 2 8,27, 0,35, +,+, 294478 Simple_repeat Simple_repeat 1462 chr2 115048059 115049706 CR1-H 839 - 115048059 115049706 0 2 1102,545, 0,1102, -,-, 294510 LINE CR1 1462 chr2 115065049 115065532 GGLTR8A 492 + 115065049 115065532 0 2 173,301, 0,182, +,+, 294518 LTR ERVL 1463 chr2 115149848 115150112 Char12Mar1_GG 749 - 115149848 115150112 0 2 40,198, 0,66, -,-, 294565 DNA hAT-Charlie 1463 chr2 115194937 115196028 CR1-Y1_Aves 436 + 115194937 115196028 0 3 240,465,341, 0,273,750, +,+,+, 294598 LINE CR1 1464 chr2 115275329 115275869 CR1-Y3 712 + 115275329 115275869 0 2 473,67, 0,473, +,+, 294632 LINE CR1 1464 chr2 115323845 115324512 CR1-Y1_Aves 528 - 115323845 115324512 0 2 216,341, 0,326, -,-, 294647 LINE CR1 1464 chr2 115325730 115326255 GGLTR8B 152 + 115325730 115326255 0 2 360,117, 0,408, +,+, 294651 LTR ERVL 1465 chr2 115383657 115384018 CR1-Y1_Aves 536 - 115383657 115384018 0 2 116,245, 0,116, -,-, 294709 LINE CR1 1465 chr2 115396024 115396140 GA-rich 520 + 115396024 115396140 0 2 48,40, 0,76, +,+, 294714 Low_complexity Low_complexity 1465 chr2 115453097 115453594 TguLTR5e 440 + 115453097 115453594 0 2 278,142, 0,355, +,+, 294745 LTR ERVL 183 chr2 115604408 115606357 CR1-D2 625 - 115604408 115606357 0 3 161,659,894, 0,396,1055, -,-,-, 294833 LINE CR1 1467 chr2 115665563 115667665 CR1-C4 567 - 115665563 115667665 0 2 1167,898, 0,1204, -,-, 294869 LINE CR1 1467 chr2 115723860 115725147 CR1-F2 689 + 115723860 115725147 0 2 778,483, 0,804, +,+, 294900 LINE CR1 1468 chr2 115753236 115753880 CR1-C4 646 - 115753236 115753880 0 2 47,123, 0,521, -,-, 294918 LINE CR1 1468 chr2 115776710 115777196 GGLTR5A 426 - 115776710 115777196 0 3 126,81,252, 0,126,234, -,-,-, 294934 LTR ERVL 1468 chr2 115827539 115828812 CR1-F2 504 + 115827539 115828812 0 2 620,640, 0,633, +,+, 294953 LINE CR1 1468 chr2 115835880 115836600 CR1-C4 552 + 115835880 115836600 0 2 586,120, 0,600, +,+, 294959 LINE CR1 1469 chr2 115877354 115877924 CR1-Y3 804 + 115877354 115877924 0 2 527,43, 0,527, +,+, 294983 LINE CR1 1469 chr2 115946474 115947450 Char12Mar1_GG 677 - 115946474 115947450 0 2 46,578, 0,398, -,-, 295008 DNA hAT-Charlie 1469 chr2 115985143 115986696 CR1-L3B_Croc 255 + 115985143 115986696 0 4 191,427,191,53, 0,191,933,1500, +,+,+,+, 295038 LINE CR1 1469 chr2 115992812 115993699 CR1-C4 518 + 115992812 115993699 0 2 158,478, 0,409, +,+, 295045 LINE CR1 1470 chr2 116009373 116009953 TguLTR5e 279 - 116009373 116009953 0 2 152,228, 0,352, -,-, 295061 LTR ERVL 1470 chr2 116032663 116033923 CR1-Y2_Aves 82 + 116032663 116033923 0 2 566,694, 0,566, +,+, 295075 LINE CR1 1470 chr2 116120336 116120490 CR1-C4 510 - 116120336 116120490 0 2 91,63, 0,91, -,-, 295130 LINE CR1 1471 chr2 116135629 116136388 CR1-11_Crp 139 + 116135629 116136388 0 2 334,144, 0,615, +,+, 295144 LINE CR1 1471 chr2 116137392 116137476 (T)n 815 + 116137392 116137476 0 2 22,24, 0,60, +,+, 295147 Simple_repeat Simple_repeat 1471 chr2 116178554 116179989 GGLTR5A 465 + 116178554 116179989 0 2 243,154, 0,1281, +,+, 295161 LTR ERVL 1471 chr2 116209363 116209926 CR1-Y2_Aves 282 + 116209363 116209926 0 2 118,228, 0,335, +,+, 295179 LINE CR1 1471 chr2 116217651 116218826 Char12Mar1_GG 521 - 116217651 116218826 0 2 255,920, 0,255, -,-, 295185 DNA hAT-Charlie 1471 chr2 116242076 116242638 GGLTR5B 216 + 116242076 116242638 0 2 463,60, 0,502, +,+, 295209 LTR ERVL 1471 chr2 116251099 116252997 CR1-Y2_Aves 403 - 116251099 116252997 0 2 1495,60, 0,1838, -,-, 295216 LINE CR1 1472 chr2 116264278 116266388 CR1-C4 636 - 116264278 116266388 0 2 60,163, 0,1947, -,-, 295227 LINE CR1 1472 chr2 116282161 116283994 CR1-D 487 - 116282161 116283994 0 3 1328,84,421, 0,1328,1412, -,-,-, 295234 LINE CR1 1472 chr2 116297968 116299789 CR1-D 487 - 116297968 116299789 0 3 1317,83,421, 0,1317,1400, -,-,-, 295243 LINE CR1 1472 chr2 116313331 116315707 CR1-D 707 - 116313331 116315707 0 3 67,1823,153, 0,400,2223, -,-,-, 295251 LINE CR1 1473 chr2 116431987 116434014 CR1-D2 616 - 116431987 116434014 0 2 157,1498, 0,529, -,-, 295321 LINE CR1 1473 chr2 116459349 116461407 CR1-Y4 559 - 116459349 116461407 0 2 1193,390, 0,1668, -,-, 295331 LINE CR1 1473 chr2 116476411 116477688 CR1-D2 486 + 116476411 116477688 0 2 155,741, 0,536, +,+, 295345 LINE CR1 1473 chr2 116476566 116476931 GGLTR4A 597 + 116476566 116476931 0 2 241,101, 0,264, +,+, 295346 LTR ERVL 1473 chr2 116512025 116513170 CR1-D 750 - 116512025 116513170 0 2 967,178, 0,967, -,-, 295372 LINE CR1 1474 chr2 116535728 116537950 CR1-Y4 427 - 116535728 116537950 0 2 478,113, 0,2109, -,-, 295391 LINE CR1 1474 chr2 116604597 116605144 CR1-L3B_Croc 272 - 116604597 116605144 0 2 139,332, 0,215, -,-, 295436 LINE CR1 1475 chr2 116750234 116750747 CR1-Y2_Aves 242 + 116750234 116750747 0 2 106,342, 0,171, +,+, 295532 LINE CR1 1476 chr2 116826229 116829662 CR1-F2 408 + 116826229 116829662 0 2 190,241, 0,3192, +,+, 295566 LINE CR1 1476 chr2 116856819 116858128 CR1-F 520 - 116856819 116858128 0 3 711,496,77, 0,736,1232, -,-,-, 295586 LINE CR1 1476 chr2 116860776 116860844 (TTAA)n 434 + 116860776 116860844 0 2 17,12, 0,56, +,+, 295589 Simple_repeat Simple_repeat 1477 chr2 116985693 116986794 GGLTR5B 303 + 116985693 116986794 0 3 135,175,138, 0,153,963, +,+,+, 295652 LTR ERVL 1477 chr2 117006075 117006649 CR1-X2 602 + 117006075 117006649 0 2 267,307, 0,267, +,+, 295669 LINE CR1 1478 chr2 117049250 117049610 REP131 176 - 117049250 117049610 0 2 105,226, 0,134, -,-, 295693 DNA? DNA? 1478 chr2 117065797 117066749 CR1-L3A_Croc 340 - 117065797 117066749 0 2 147,101, 0,851, -,-, 295704 LINE CR1 1479 chr2 117256760 117257405 CR1-Y3 602 - 117256760 117257405 0 2 440,205, 0,440, -,-, 295824 LINE CR1 1480 chr2 117374024 117374599 UCON28a 445 - 117374024 117374599 0 2 280,51, 0,524, -,-, 295871 Unknown Unknown 1480 chr2 117387364 117387953 GGLTR5A 358 + 117387364 117387953 0 2 237,262, 0,327, +,+, 295878 LTR ERVL 1481 chr2 117474216 117474913 CR1-Y2_Aves 363 + 117474216 117474913 0 2 62,570, 0,127, +,+, 295912 LINE CR1 1482 chr2 117591957 117593200 CR1-Y2_Aves 154 + 117591957 117593200 0 3 161,184,666, 0,180,577, +,+,+, 295998 LINE CR1 1483 chr2 117765344 117766100 CR1-C4 578 + 117765344 117766100 0 2 51,705, 0,51, +,+, 296120 LINE CR1 1483 chr2 117804864 117806576 CR1-C4 441 + 117804864 117806576 0 2 181,890, 0,822, +,+, 296148 LINE CR1 1484 chr2 117835943 117837105 CR1-X1 563 + 117835943 117837105 0 2 983,179, 0,983, +,+, 296164 LINE CR1 1484 chr2 117941333 117942385 CR1-F2 651 - 117941333 117942385 0 2 749,303, 0,749, -,-, 296232 LINE CR1 1484 chr2 117950844 117952141 Char12Mar1_GG 628 - 117950844 117952141 0 2 268,257, 0,1040, -,-, 296235 DNA hAT-Charlie 1485 chr2 117988138 117988529 CR1-B2 666 - 117988138 117988529 0 2 204,187, 0,204, -,-, 296247 LINE CR1 1485 chr2 118013867 118014190 CR1-Y2_Aves 434 + 118013867 118014190 0 3 78,81,98, 0,78,225, +,+,+, 296254 LINE CR1 1485 chr2 118079245 118079971 CR1-C4 682 - 118079245 118079971 0 2 313,147, 0,579, -,-, 296283 LINE CR1 1486 chr2 118146114 118146735 CR1-Y2_Aves 204 + 118146114 118146735 0 2 137,467, 0,154, +,+, 296329 LINE CR1 1486 chr2 118221126 118221928 UCON27 179 - 118221126 118221928 0 2 241,142, 0,660, -,-, 296358 Unknown Unknown 1487 chr2 118252376 118252918 CR1-L3B_Croc 280 - 118252376 118252918 0 2 333,112, 0,430, -,-, 296367 LINE CR1 1487 chr2 118301785 118303814 CR1-C 830 - 118301785 118303814 0 2 218,1811, 0,218, -,-, 296385 LINE CR1 1487 chr2 118318987 118322779 CR1-D2 458 + 118318987 118322779 0 2 421,750, 0,3042, +,+, 296395 LINE CR1 1487 chr2 118344171 118345219 CR1-Y2_Aves 203 - 118344171 118345219 0 2 408,638, 0,410, -,-, 296405 LINE CR1 1488 chr2 118376776 118376896 (TA)n 168 + 118376776 118376896 0 2 15,62, 0,58, +,+, 296423 Simple_repeat Simple_repeat 1488 chr2 118386129 118386208 (ACAAGAA)n 420 + 118386129 118386208 0 2 36,7, 0,72, +,+, 296426 Simple_repeat Simple_repeat 1488 chr2 118399586 118400242 CR1-Y4 483 + 118399586 118400242 0 2 67,384, 0,272, +,+, 296434 LINE CR1 1488 chr2 118415183 118417584 CR1-X2 347 + 118415183 118417584 0 2 1939,462, 0,1939, +,+, 296441 LINE CR1 1488 chr2 118424174 118425358 CR1-F2 508 + 118424174 118425358 0 2 682,495, 0,689, +,+, 296446 LINE CR1 1488 chr2 118459963 118460229 CR1-F2 414 + 118459963 118460229 0 2 19,147, 0,119, +,+, 296468 LINE CR1 1489 chr2 118508687 118509922 CR1-C4 580 - 118508687 118509922 0 2 185,431, 0,804, -,-, 296493 LINE CR1 1489 chr2 118581992 118582676 CR1-C2 553 + 118581992 118582676 0 2 281,346, 0,338, +,+, 296533 LINE CR1 1490 chr2 118688405 118689423 CR1-8_Crp 467 + 118688405 118689423 0 2 513,49, 0,969, +,+, 296594 LINE CR1 1490 chr2 118706454 118707174 CR1-Y1_Aves 170 + 118706454 118707174 0 2 117,190, 0,530, +,+, 296608 LINE CR1 1491 chr2 118767026 118767558 CR1-11_Crp 157 + 118767026 118767558 0 2 171,188, 0,344, +,+, 296649 LINE CR1 1491 chr2 118770563 118770727 TguLTR5d 440 - 118770563 118770727 0 2 95,63, 0,101, -,-, 296651 LTR ERVL 1491 chr2 118865545 118866583 CR1-X2 612 + 118865545 118866583 0 3 41,126,142, 0,770,896, +,+,+, 296717 LINE CR1 1492 chr2 118905488 118907387 CR1-C4 635 + 118905488 118907387 0 2 1279,33, 0,1866, +,+, 296753 LINE CR1 1492 chr2 118909063 118909140 G-rich 460 + 118909063 118909140 0 2 24,12, 0,65, +,+, 296756 Low_complexity Low_complexity 1492 chr2 118927088 118927765 CR1-E 670 - 118927088 118927765 0 2 168,509, 0,168, -,-, 296769 LINE CR1 1492 chr2 118972176 118972371 CR1-C4 509 + 118972176 118972371 0 2 116,78, 0,117, +,+, 296796 LINE CR1 1492 chr2 119005450 119005855 CR1-F2 485 - 119005450 119005855 0 2 244,155, 0,250, -,-, 296822 LINE CR1 1493 chr2 119097267 119097648 LFSINE_Vert 271 + 119097267 119097648 0 2 80,146, 0,235, +,+, 296888 SINE tRNA 1494 chr2 119154725 119154810 (TTTCTT)n 380 + 119154725 119154810 0 2 37,7, 0,78, +,+, 296928 Simple_repeat Simple_repeat 1494 chr2 119249772 119250875 GGLTR8B 588 + 119249772 119250875 0 3 42,151,528, 0,424,575, +,+,+, 297008 LTR ERVL 1494 chr2 119253533 119255002 CR1-E 716 + 119253533 119255002 0 2 79,821, 0,648, +,+, 297014 LINE CR1 1494 chr2 119269636 119269703 CR1-E 857 - 119269636 119269703 0 2 41,26, 0,41, -,-, 297024 LINE CR1 1495 chr2 119310040 119310757 GGERVL-B-int 156 - 119310040 119310757 0 2 237,238, 0,479, -,-, 297069 LTR ERVL 1495 chr2 119315387 119316448 CR1-X2 627 + 119315387 119316448 0 3 277,125,150, 0,786,911, +,+,+, 297073 LINE CR1 1495 chr2 119336320 119337601 CR1-L3B_Croc 325 - 119336320 119337601 0 3 72,130,287, 0,84,994, -,-,-, 297102 LINE CR1 1495 chr2 119346448 119346688 TguLTR5e 474 - 119346448 119346688 0 2 78,58, 0,182, -,-, 297111 LTR ERVL 1495 chr2 119367698 119368239 CR1-F2 306 - 119367698 119368239 0 2 175,332, 0,209, -,-, 297134 LINE CR1 1495 chr2 119386496 119387842 OldhAT1 187 - 119386496 119387842 0 2 392,149, 0,1197, -,-, 297158 DNA hAT-Ac 1496 chr2 119422054 119423610 GGLTR12C 718 + 119422054 119423610 0 2 122,623, 0,933, +,+, 297192 LTR ERVL 1496 chr2 119484480 119485279 CR1-C4 609 + 119484480 119485279 0 2 363,436, 0,363, +,+, 297252 LINE CR1 1496 chr2 119510430 119511031 CR1-H 877 - 119510430 119511031 0 2 100,495, 0,106, -,-, 297288 LINE CR1 1497 chr2 119567977 119569439 CR1-Y1_Aves 486 + 119567977 119569439 0 2 254,488, 0,974, +,+, 297350 LINE CR1 1497 chr2 119568231 119571685 CR1-H2 334 + 119568231 119571685 0 2 55,186, 0,3268, +,+, 297352 LINE CR1 1498 chr2 119679253 119679701 CR1-L3B_Croc 238 + 119679253 119679701 0 2 219,216, 0,232, +,+, 297445 LINE CR1 1500 chr2 119945066 119946427 CR1-Y1_Aves 266 - 119945066 119946427 0 2 1037,322, 0,1039, -,-, 297671 LINE CR1 1500 chr2 119951960 119952319 CR1-D2 548 + 119951960 119952319 0 2 106,216, 0,143, +,+, 297675 LINE CR1 1500 chr2 119981791 119982057 CR1-D2 46 - 119981791 119982057 0 2 14,105, 0,161, -,-, 297710 LINE CR1 1500 chr2 119987644 119989241 CR1-D2 563 + 119987644 119989241 0 3 370,185,587, 0,816,1010, +,+,+, 297721 LINE CR1 1500 chr2 120025852 120028589 GGERVL-C-int 748 + 120025852 120028589 0 2 2216,521, 0,2216, +,+, 297752 LTR ERVL 1500 chr2 120041380 120043376 CR1-C4 481 - 120041380 120043376 0 2 1193,230, 0,1766, -,-, 297768 LINE CR1 187 chr2 120060843 120061982 CR1-Y4 143 + 120060843 120061982 0 3 280,106,171, 0,827,968, +,+,+, 297788 LINE CR1 1501 chr2 120087199 120090445 CR1-F 762 - 120087199 120090445 0 2 1411,1822, 0,1424, -,-, 297819 LINE CR1 1501 chr2 120143195 120144357 CR1-X2 162 - 120143195 120144357 0 2 780,377, 0,785, -,-, 297875 LINE CR1 1501 chr2 120154817 120155587 CR1-C4 568 + 120154817 120155587 0 2 237,56, 0,714, +,+, 297886 LINE CR1 1501 chr2 120168537 120169672 CR1-L3B_Croc 177 + 120168537 120169672 0 2 318,380, 0,755, +,+, 297908 LINE CR1 1501 chr2 120174785 120176563 CR1-F2 574 + 120174785 120176563 0 3 104,577,525, 0,112,1253, +,+,+, 297914 LINE CR1 1501 chr2 120188756 120190529 CR1-D 515 - 120188756 120190529 0 2 1005,202, 0,1571, -,-, 297922 LINE CR1 1502 chr2 120241300 120241704 GGLTR5B 388 - 120241300 120241704 0 2 229,102, 0,302, -,-, 297972 LTR ERVL 1502 chr2 120246875 120247403 CR1-X2 636 - 120246875 120247403 0 2 100,426, 0,102, -,-, 297978 LINE CR1 1502 chr2 120251146 120251209 (TATAGTA)n 594 + 120251146 120251209 0 2 7,23, 0,40, +,+, 297985 Simple_repeat Simple_repeat 1503 chr2 120343180 120344495 CR1-C 830 - 120343180 120344495 0 2 415,900, 0,415, -,-, 298087 LINE CR1 1503 chr2 120447410 120451361 CR1-C4 624 - 120447410 120451361 0 2 105,53, 0,3898, -,-, 298095 LINE CR1 1504 chr2 120455619 120457139 CR1-C 837 - 120455619 120457139 0 2 415,1105, 0,415, -,-, 298103 LINE CR1 1504 chr2 120500908 120501383 CR1-C4 454 - 120500908 120501383 0 2 12,414, 0,61, -,-, 298138 LINE CR1 1504 chr2 120509223 120509870 Char12Mar1_GG 665 - 120509223 120509870 0 2 124,437, 0,210, -,-, 298146 DNA hAT-Charlie 1504 chr2 120522969 120523500 TguLTR5e 328 - 120522969 120523500 0 2 117,279, 0,252, -,-, 298157 LTR ERVL 1505 chr2 120636733 120637818 Mariner1_GG 652 - 120636733 120637818 0 2 423,662, 0,423, -,-, 298249 DNA TcMar-Mariner 1506 chr2 120743488 120744033 GGLTR8A 557 - 120743488 120744033 0 2 291,254, 0,291, -,-, 298324 LTR ERVL 1506 chr2 120746355 120746417 (GGTT)n 424 + 120746355 120746417 0 2 20,14, 0,48, +,+, 298325 Simple_repeat Simple_repeat 1506 chr2 120748309 120749504 CR1-F 500 - 120748309 120749504 0 2 683,512, 0,683, -,-, 298327 LINE CR1 1506 chr2 120792641 120793408 CR1-Y2_Aves 278 + 120792641 120793408 0 2 218,489, 0,278, +,+, 298358 LINE CR1 1506 chr2 120830011 120832630 CR1-Y1_Aves 433 - 120830011 120832630 0 2 290,102, 0,2517, -,-, 298381 LINE CR1 1507 chr2 120951221 120952138 CR1-F2 466 + 120951221 120952138 0 2 499,416, 0,501, +,+, 298486 LINE CR1 1508 chr2 120996170 120997485 CR1-C4 542 - 120996170 120997485 0 3 372,101,587, 0,627,728, -,-,-, 298510 LINE CR1 1509 chr2 121123460 121124325 CR1-C 875 + 121123460 121124325 0 2 447,418, 0,447, +,+, 298525 LINE CR1 1509 chr2 121125463 121128901 CR1-C4 472 + 121125463 121128901 0 2 949,234, 0,3204, +,+, 298528 LINE CR1 1509 chr2 121131598 121135058 CR1-C 723 - 121131598 121135058 0 2 1142,1781, 0,1679, -,-, 298533 LINE CR1 1509 chr2 121137419 121138012 CR1-E 535 + 121137419 121138012 0 2 15,382, 0,211, +,+, 298538 LINE CR1 1509 chr2 121157486 121163294 GGLTR3F1 898 - 121157486 121163294 0 2 5310,497, 0,5311, -,-, 298549 LTR ERVL 1509 chr2 121180018 121180600 CR1-F2 644 + 121180018 121180600 0 2 44,532, 0,50, +,+, 298560 LINE CR1 1509 chr2 121187352 121189485 CR1-F2 451 - 121187352 121189485 0 2 1149,958, 0,1175, -,-, 298562 LINE CR1 1509 chr2 121207780 121207861 (TTTTTC)n 478 + 121207780 121207861 0 2 23,9, 0,72, +,+, 298571 Simple_repeat Simple_repeat 1509 chr2 121226669 121227448 REP131 283 - 121226669 121227448 0 2 355,213, 0,566, -,-, 298583 DNA? DNA? 1510 chr2 121271180 121271313 GGLTR5B 671 . 121271180 121271313 0 2 77,56, 0,77, +,-, 298608 LTR ERVL 1510 chr2 121341283 121341943 CR1-Y1_Aves 531 - 121341283 121341943 0 3 85,490,85, 0,85,575, -,-,-, 298663 LINE CR1 1510 chr2 121356223 121357414 CR1-C4 430 + 121356223 121357414 0 2 123,1068, 0,123, +,+, 298669 LINE CR1 1511 chr2 121411660 121412040 CR1-Y1_Aves 674 - 121411660 121412040 0 2 320,60, 0,320, -,-, 298707 LINE CR1 1511 chr2 121447131 121448325 CR1-F2 343 - 121447131 121448325 0 2 263,931, 0,263, -,-, 298727 LINE CR1 1512 chr2 121508047 121508932 GGLTR8A 436 + 121508047 121508932 0 2 312,365, 0,520, +,+, 298752 LTR ERVL 1512 chr2 121578214 121578598 CR1-C4 541 - 121578214 121578598 0 2 241,54, 0,330, -,-, 298795 LINE CR1 1513 chr2 121656315 121656822 CR1-D 531 - 121656315 121656822 0 2 150,357, 0,150, -,-, 298845 LINE CR1 1513 chr2 121666672 121667354 CR1-E 671 - 121666672 121667354 0 2 431,251, 0,431, -,-, 298852 LINE CR1 1514 chr2 121766249 121766908 CR1-C4 473 + 121766249 121766908 0 2 352,296, 0,363, +,+, 298901 LINE CR1 1514 chr2 121809485 121810916 CR1-Y4 559 - 121809485 121810916 0 2 289,70, 0,1361, -,-, 298932 LINE CR1 1514 chr2 121868330 121868755 GGLTR8A 576 - 121868330 121868755 0 2 257,161, 0,264, -,-, 298963 LTR ERVL 1514 chr2 121872864 121873686 Mariner1_GG 691 - 121872864 121873686 0 2 541,281, 0,541, -,-, 298965 DNA TcMar-Mariner 1514 chr2 121886015 121886151 (T)n 782 + 121886015 121886151 0 2 25,60, 0,76, +,+, 298973 Simple_repeat Simple_repeat 1515 chr2 121918071 121920165 CR1-X2 614 + 121918071 121920165 0 2 1226,406, 0,1688, +,+, 298998 LINE CR1 1515 chr2 122001364 122002943 CR1-Y4 554 + 122001364 122002943 0 3 362,199,529, 0,851,1050, +,+,+, 299041 LINE CR1 1515 chr2 122001722 122002214 CR1-F2 637 - 122001722 122002214 0 2 232,252, 0,240, -,-, 299042 LINE CR1 1516 chr2 122035896 122036209 CR1-X 698 - 122035896 122036209 0 2 90,223, 0,90, -,-, 299060 LINE CR1 1516 chr2 122036453 122037312 CR1-F2 554 + 122036453 122037312 0 2 57,399, 0,460, +,+, 299061 LINE CR1 1516 chr2 122088674 122090197 CR1-Y2_Aves 395 + 122088674 122090197 0 2 963,303, 0,1220, +,+, 299090 LINE CR1 1516 chr2 122088914 122089820 CR1-Y4 433 + 122088914 122089820 0 2 864,42, 0,864, +,+, 299091 LINE CR1 1517 chr2 122162288 122162725 CR1-C2 840 + 122162288 122162725 0 2 35,398, 0,39, +,+, 299142 LINE CR1 1517 chr2 122211665 122213249 CR1-E 757 + 122211665 122213249 0 3 50,852,676, 0,56,908, +,+,+, 299175 LINE CR1 1517 chr2 122230269 122231513 Char12Mar1_GG 593 - 122230269 122231513 0 2 692,550, 0,694, -,-, 299191 DNA hAT-Charlie 1517 chr2 122233930 122236252 CR1-H 850 + 122233930 122236252 0 2 679,1282, 0,1040, +,+, 299193 LINE CR1 1517 chr2 122269447 122269971 CR1-Y2 360 + 122269447 122269971 0 2 423,101, 0,423, +,+, 299225 LINE CR1 1518 chr2 122321272 122321645 CR1-D 653 + 122321272 122321645 0 2 243,127, 0,246, +,+, 299271 LINE CR1 1518 chr2 122371698 122373257 CR1-D2 571 - 122371698 122373257 0 2 921,293, 0,1266, -,-, 299318 LINE CR1 1518 chr2 122404735 122404940 CR1-C4 523 + 122404735 122404940 0 2 43,160, 0,45, +,+, 299349 LINE CR1 1518 chr2 122408464 122409024 GGLTR3E3 768 + 122408464 122409024 0 2 294,241, 0,319, +,+, 299357 LTR ERVL 1519 chr2 122434174 122435585 CR1-Y3 533 + 122434174 122435585 0 2 438,952, 0,459, +,+, 299379 LINE CR1 1519 chr2 122464321 122465204 ENS1B-LTR 438 + 122464321 122465204 0 2 182,670, 0,213, +,+, 299408 LTR ERVL 1519 chr2 122475924 122476249 Charlie12_GG 492 - 122475924 122476249 0 2 151,69, 0,256, -,-, 299419 DNA hAT-Charlie 1519 chr2 122485071 122485191 A-rich 350 + 122485071 122485191 0 2 18,53, 0,67, +,+, 299427 Low_complexity Low_complexity 1519 chr2 122485907 122486542 Char12Mar1_GG 635 - 122485907 122486542 0 2 373,189, 0,446, -,-, 299429 DNA hAT-Charlie 1519 chr2 122522291 122524936 CR1-D 663 - 122522291 122524936 0 3 657,88,1055, 0,1098,1590, -,-,-, 299457 LINE CR1 1519 chr2 122539170 122541371 CR1-B2 743 + 122539170 122541371 0 2 1116,1085, 0,1116, +,+, 299474 LINE CR1 1519 chr2 122550829 122551703 GGLTR8B 190 - 122550829 122551703 0 2 533,341, 0,533, -,-, 299484 LTR ERVL 1520 chr2 122558972 122560258 CR1-H2 149 - 122558972 122560258 0 3 130,317,674, 0,132,612, -,-,-, 299492 LINE CR1 1520 chr2 122597761 122600190 CR1-B 869 - 122597761 122600190 0 2 971,975, 0,1454, -,-, 299528 LINE CR1 1520 chr2 122611795 122612743 Mariner1_GG 627 - 122611795 122612743 0 2 156,792, 0,156, -,-, 299543 DNA TcMar-Mariner 1520 chr2 122619833 122620017 CR1-C2 672 + 122619833 122620017 0 2 37,147, 0,37, +,+, 299550 LINE CR1 1520 chr2 122631349 122631427 (TCCTT)n 430 + 122631349 122631427 0 2 6,19, 0,59, +,+, 299556 Simple_repeat Simple_repeat 1520 chr2 122649688 122650453 CR1-C4 465 + 122649688 122650453 0 2 199,566, 0,199, +,+, 299572 LINE CR1 1520 chr2 122668295 122668538 CR1-F 256 - 122668295 122668538 0 2 45,198, 0,45, -,-, 299593 LINE CR1 1521 chr2 122700103 122701422 CR1-Y1_Aves 522 - 122700103 122701422 0 2 431,56, 0,1263, -,-, 299623 LINE CR1 1521 chr2 122701446 122702286 CR1-Y2_Aves 294 - 122701446 122702286 0 2 250,451, 0,389, -,-, 299625 LINE CR1 1522 chr2 122815754 122816746 CR1-Y3 714 - 122815754 122816746 0 2 411,439, 0,553, -,-, 299712 LINE CR1 1522 chr2 122825144 122825379 CR1-B2 502 + 122825144 122825379 0 2 16,75, 0,160, +,+, 299724 LINE CR1 1522 chr2 122910941 122911252 REP131 243 - 122910941 122911252 0 2 80,209, 0,102, -,-, 299796 DNA? DNA? 1523 chr2 122949245 122949987 CR1-L3A_Croc 36 + 122949245 122949987 0 2 412,215, 0,527, +,+, 299841 LINE CR1 1523 chr2 122962850 122963576 CR1-C 888 - 122962850 122963576 0 2 203,519, 0,207, -,-, 299853 LINE CR1 1523 chr2 122965460 122966189 Mariner1b_GG 665 - 122965460 122966189 0 2 279,288, 0,441, -,-, 299856 DNA TcMar-Mariner 1523 chr2 123053740 123054322 CR1-C4 419 - 123053740 123054322 0 2 291,291, 0,291, -,-, 299923 LINE CR1 1524 chr2 123081875 123082376 GGLTR5B 185 - 123081875 123082376 0 2 181,286, 0,215, -,-, 299952 LTR ERVL 1524 chr2 123093834 123094091 CR1-F2 946 - 123093834 123094091 0 2 108,149, 0,108, -,-, 299962 LINE CR1 1524 chr2 123100977 123101627 CR1-11_Crp 258 - 123100977 123101627 0 2 86,444, 0,206, -,-, 299966 LINE CR1 1524 chr2 123135801 123136631 GGLTR5A 409 + 123135801 123136631 0 2 289,270, 0,560, +,+, 299988 LTR ERVL 1524 chr2 123149544 123151803 Char12Mar1_GG 598 - 123149544 123151803 0 2 282,270, 0,1989, -,-, 300000 DNA hAT-Charlie 1524 chr2 123202624 123202923 CR1-E 713 - 123202624 123202923 0 2 249,48, 0,251, -,-, 300044 LINE CR1 1525 chr2 123250020 123250080 (GGC)n 338 + 123250020 123250080 0 2 9,7, 0,53, +,+, 300066 Simple_repeat Simple_repeat 1525 chr2 123256742 123257281 CR1-L3A_Croc 250 - 123256742 123257281 0 2 205,86, 0,453, -,-, 300076 LINE CR1 190 chr2 123469531 123471938 CR1-X2 543 - 123469531 123471938 0 2 131,2275, 0,132, -,-, 300190 LINE CR1 1527 chr2 123473512 123474470 CR1-E 358 - 123473512 123474470 0 2 304,654, 0,304, -,-, 300194 LINE CR1 1527 chr2 123537577 123537675 (ACAA)n 480 + 123537577 123537675 0 2 46,11, 0,87, +,+, 300238 Simple_repeat Simple_repeat 1527 chr2 123585652 123586424 CR1-F2 567 - 123585652 123586424 0 3 537,104,131, 0,537,641, -,-,-, 300266 LINE CR1 1528 chr2 123635658 123636219 TguLTR5e 266 + 123635658 123636219 0 2 308,213, 0,348, +,+, 300298 LTR ERVL 1528 chr2 123665116 123666050 Char12Mar1_GG 583 - 123665116 123666050 0 2 117,413, 0,521, -,-, 300312 DNA hAT-Charlie 1529 chr2 123747332 123748094 CR1-Y2_Aves 139 + 123747332 123748094 0 2 561,197, 0,565, +,+, 300355 LINE CR1 1529 chr2 123777941 123778866 Charlie12_GG 465 - 123777941 123778866 0 2 491,264, 0,661, -,-, 300373 DNA hAT-Charlie 1529 chr2 123780799 123781680 GGLTR12C 582 - 123780799 123781680 0 2 208,653, 0,228, -,-, 300377 LTR ERVL 1529 chr2 123801851 123802272 CR1-D2 712 + 123801851 123802272 0 2 109,302, 0,119, +,+, 300394 LINE CR1 1529 chr2 123805329 123805674 CR1-F2 484 + 123805329 123805674 0 2 220,125, 0,220, +,+, 300399 LINE CR1 1529 chr2 123824255 123824794 CR1-Y1_Aves 432 + 123824255 123824794 0 2 101,311, 0,228, +,+, 300414 LINE CR1 1530 chr2 123902415 123902918 CR1-X2 610 - 123902415 123902918 0 2 74,212, 0,291, -,-, 300481 LINE CR1 1530 chr2 123915998 123916743 CR1-C 810 + 123915998 123916743 0 2 399,114, 0,631, +,+, 300492 LINE CR1 1530 chr2 123921702 123922003 GGERVL-C-int 87 + 123921702 123922003 0 2 117,184, 0,117, +,+, 300497 LTR ERVL 1530 chr2 123946880 123946965 (TTCTTT)n 232 + 123946880 123946965 0 2 18,34, 0,51, +,+, 300525 Simple_repeat Simple_repeat 1530 chr2 123959752 123960239 GGLTR8B 185 + 123959752 123960239 0 2 278,189, 0,298, +,+, 300542 LTR ERVL 1530 chr2 123962163 123963460 CR1-E 709 + 123962163 123963460 0 3 206,258,478, 0,206,819, +,+,+, 300546 LINE CR1 1531 chr2 124037465 124037543 (TGTATA)n 400 + 124037465 124037543 0 2 11,14, 0,64, +,+, 300614 Simple_repeat Simple_repeat 1531 chr2 124100824 124101312 CR1-16_AMi 285 - 124100824 124101312 0 2 135,237, 0,251, -,-, 300671 LINE CR1 1531 chr2 124108376 124108916 GGLTR8B 250 - 124108376 124108916 0 2 233,136, 0,404, -,-, 300678 LTR ERVL 1532 chr2 124138371 124140269 CR1-C4 538 + 124138371 124140269 0 3 858,351,680, 0,858,1218, +,+,+, 300703 LINE CR1 1532 chr2 124147636 124148934 CR1-Y1_Aves 355 - 124147636 124148934 0 2 389,909, 0,389, -,-, 300706 LINE CR1 1532 chr2 124177634 124178334 GGLTR8B 223 - 124177634 124178334 0 2 198,315, 0,385, -,-, 300732 LTR ERVL 1532 chr2 124185546 124187595 CR1-Y1_Aves 324 - 124185546 124187595 0 2 256,545, 0,1504, -,-, 300741 LINE CR1 1532 chr2 124185810 124187048 CR1-C3 633 - 124185810 124187048 0 2 398,783, 0,455, -,-, 300742 LINE CR1 1532 chr2 124222501 124223168 CR1-Y4 471 - 124222501 124223168 0 2 390,195, 0,472, -,-, 300779 LINE CR1 1532 chr2 124242505 124243172 CR1-Y4 471 - 124242505 124243172 0 2 390,195, 0,472, -,-, 300800 LINE CR1 1533 chr2 124313087 124314702 CR1-E 470 + 124313087 124314702 0 2 1063,545, 0,1070, +,+, 300860 LINE CR1 1533 chr2 124345589 124345927 ENS1B-LTR 904 + 124345589 124345927 0 2 110,228, 0,110, +,+, 300889 LTR ERVL 1533 chr2 124351642 124352603 CR1-D2 589 - 124351642 124352603 0 3 52,844,65, 0,52,896, -,-,-, 300895 LINE CR1 1534 chr2 124427829 124430410 CR1-E 358 - 124427829 124430410 0 3 251,259,420, 0,1000,2161, -,-,-, 300955 LINE CR1 1534 chr2 124428096 124428827 CR1-D2 637 + 124428096 124428827 0 2 202,163, 0,568, +,+, 300956 LINE CR1 1534 chr2 124488296 124489431 CR1-X 382 + 124488296 124489431 0 2 733,402, 0,733, +,+, 301020 LINE CR1 1534 chr2 124503155 124504296 CR1-Y4 526 - 124503155 124504296 0 2 536,580, 0,561, -,-, 301039 LINE CR1 1534 chr2 124512939 124513706 Charlie12_GG 376 - 124512939 124513706 0 2 276,459, 0,308, -,-, 301053 DNA hAT-Charlie 1535 chr2 124567817 124570258 CR1-D 723 - 124567817 124570258 0 2 1260,1181, 0,1260, -,-, 301094 LINE CR1 1535 chr2 124578204 124578574 GGLTR5A 376 + 124578204 124578574 0 2 264,79, 0,291, +,+, 301104 LTR ERVL 1535 chr2 124580535 124581893 CR1-Y1_Aves 554 - 124580535 124581893 0 2 75,491, 0,867, -,-, 301107 LINE CR1 1535 chr2 124610200 124611783 CR1-X2 169 + 124610200 124611783 0 2 675,208, 0,1375, +,+, 301131 LINE CR1 1535 chr2 124616107 124617222 GGERVL-C-int 356 - 124616107 124617222 0 2 609,479, 0,636, -,-, 301142 LTR ERVL 1535 chr2 124617277 124618113 GGERVL-A-int 248 - 124617277 124618113 0 2 113,199, 0,637, -,-, 301143 LTR ERVL 1535 chr2 124620686 124621134 CR1-Y2_Aves 368 + 124620686 124621134 0 2 187,100, 0,348, +,+, 301153 LINE CR1 1535 chr2 124629764 124632676 CR1-D 741 - 124629764 124632676 0 3 266,397,1831, 0,266,1081, -,-,-, 301158 LINE CR1 1535 chr2 124633402 124635194 GGLTR5A 468 + 124633402 124635194 0 2 141,383, 0,1409, +,+, 301160 LTR ERVL 1535 chr2 124635984 124638426 CR1-E 804 - 124635984 124638426 0 2 143,1483, 0,959, -,-, 301162 LINE CR1 1536 chr2 124678716 124685245 Char12Mar1_GG 591 - 124678716 124685245 0 2 542,48, 0,6481, -,-, 301192 DNA hAT-Charlie 1536 chr2 124693693 124694717 CR1-C4 407 - 124693693 124694717 0 2 875,95, 0,929, -,-, 301209 LINE CR1 1536 chr2 124696670 124698931 CR1-Y3 731 + 124696670 124698931 0 3 394,590,218, 0,923,2043, +,+,+, 301213 LINE CR1 1536 chr2 124699417 124701451 CR1-F2 503 + 124699417 124701451 0 2 910,1124, 0,910, +,+, 301216 LINE CR1 1536 chr2 124779479 124779827 GGLTR5B 453 + 124779479 124779827 0 2 245,103, 0,245, +,+, 301273 LTR ERVL 1537 chr2 124798127 124799587 CR1-Y1_Aves 631 + 124798127 124799587 0 3 50,104,403, 0,54,1057, +,+,+, 301289 LINE CR1 1538 chr2 124952261 124953070 GGERVL-C-int 550 + 124952261 124953070 0 2 185,545, 0,264, +,+, 301382 LTR ERVL 1539 chr2 125101980 125102369 CR1-C2 931 - 125101980 125102369 0 2 30,359, 0,30, -,-, 301471 LINE CR1 1540 chr2 125202105 125202702 CR1-X1 606 + 125202105 125202702 0 2 186,411, 0,186, +,+, 301535 LINE CR1 1541 chr2 125401543 125402608 CR1-F2 492 - 125401543 125402608 0 2 69,983, 0,82, -,-, 301653 LINE CR1 1541 chr2 125411602 125411650 (TCTT)n 558 + 125411602 125411650 0 2 6,7, 0,41, +,+, 301657 Simple_repeat Simple_repeat 1542 chr2 125439440 125440221 CR1-C4 621 - 125439440 125440221 0 2 420,87, 0,694, -,-, 301677 LINE CR1 1542 chr2 125552772 125553835 CR1-Y2_Aves 192 - 125552772 125553835 0 2 756,141, 0,922, -,-, 301743 LINE CR1 1543 chr2 125621916 125621993 (A)n 900 + 125621916 125621993 0 2 22,22, 0,55, +,+, 301781 Simple_repeat Simple_repeat 1543 chr2 125629472 125630672 CR1-F2 443 + 125629472 125630672 0 2 116,89, 0,1111, +,+, 301787 LINE CR1 1544 chr2 125747944 125748133 (AT)n 294 + 125747944 125748133 0 2 62,18, 0,171, +,+, 301856 Simple_repeat Simple_repeat 1544 chr2 125776414 125776508 (A)n 845 + 125776414 125776508 0 2 27,29, 0,65, +,+, 301879 Simple_repeat Simple_repeat 1545 chr2 125914845 125915573 CR1-Y4 247 - 125914845 125915573 0 2 160,107, 0,621, -,-, 301952 LINE CR1 1547 chr2 126122930 126123407 CR1-L3B_Croc 264 - 126122930 126123407 0 2 154,122, 0,355, -,-, 302095 LINE CR1 1547 chr2 126142741 126143228 Char12Mar1_GG 766 - 126142741 126143228 0 2 94,347, 0,140, -,-, 302108 DNA hAT-Charlie 1547 chr2 126157865 126158458 CR1-Y4 581 - 126157865 126158458 0 2 155,438, 0,155, -,-, 302120 LINE CR1 1547 chr2 126171686 126171737 (TATTT)n 506 + 126171686 126171737 0 2 12,6, 0,45, +,+, 302129 Simple_repeat Simple_repeat 1547 chr2 126188200 126190808 CR1-L3B_Croc 205 - 126188200 126190808 0 3 140,340,210, 0,1645,2398, -,-,-, 302139 LINE CR1 1547 chr2 126200969 126201617 CR1-L3B_Croc 156 + 126200969 126201617 0 2 128,284, 0,364, +,+, 302148 LINE CR1 1547 chr2 126203954 126204492 CR1-C4 672 - 126203954 126204492 0 2 69,453, 0,85, -,-, 302149 LINE CR1 1547 chr2 126206681 126208079 REP131 149 - 126206681 126208079 0 2 142,754, 0,644, -,-, 302153 DNA? DNA? 1548 chr2 126246783 126247389 CR1-X1 666 - 126246783 126247389 0 2 354,252, 0,354, -,-, 302171 LINE CR1 1549 chr2 126391068 126391420 CR1-L3B_Croc 332 - 126391068 126391420 0 2 57,201, 0,151, -,-, 302261 LINE CR1 1549 chr2 126479698 126479871 CR1-C4 644 - 126479698 126479871 0 2 56,112, 0,61, -,-, 302312 LINE CR1 1549 chr2 126481458 126482500 CR1-Y2_Aves 296 - 126481458 126482500 0 2 70,798, 0,244, -,-, 302315 LINE CR1 1550 chr2 126557573 126558021 CR1-L3A_Croc 234 - 126557573 126558021 0 2 287,99, 0,349, -,-, 302354 LINE CR1 1551 chr2 126689510 126690687 TguLTR5d 479 + 126689510 126690687 0 2 155,122, 0,1055, +,+, 302416 LTR ERVL 1552 chr2 126809621 126810393 CR1-X 696 - 126809621 126810393 0 2 343,429, 0,343, -,-, 302467 LINE CR1 1552 chr2 126832788 126832902 (CGC)n 350 + 126832788 126832902 0 2 30,20, 0,94, +,+, 302476 Simple_repeat Simple_repeat 1552 chr2 126868179 126868924 CR1-X1 685 + 126868179 126868924 0 2 95,85, 0,660, +,+, 302502 LINE CR1 1553 chr2 126952057 126953381 CR1-Y2_Aves 167 - 126952057 126953381 0 3 468,83,609, 0,627,715, -,-,-, 302550 LINE CR1 194 chr2 127139772 127141793 CR1-L3A_Croc 177 + 127139772 127141793 0 2 142,682, 0,1339, +,+, 302655 LINE CR1 1555 chr2 127151754 127152506 REP131 225 - 127151754 127152506 0 3 276,71,98, 0,555,654, -,-,-, 302665 DNA? DNA? 1555 chr2 127175319 127177870 CR1-Y2_Aves 284 - 127175319 127177870 0 2 1139,274, 0,2277, -,-, 302686 LINE CR1 1555 chr2 127230563 127231100 CR1-L3B_Croc 123 + 127230563 127231100 0 2 143,212, 0,325, +,+, 302721 LINE CR1 1556 chr2 127314260 127314871 CR1-F2 684 - 127314260 127314871 0 2 92,519, 0,92, -,-, 302767 LINE CR1 1557 chr2 127434150 127435362 CR1-B2 573 - 127434150 127435362 0 2 1044,90, 0,1122, -,-, 302845 LINE CR1 1557 chr2 127446637 127446879 CR1-8_Crp 415 - 127446637 127446879 0 2 137,100, 0,142, -,-, 302852 LINE CR1 1558 chr2 127558132 127558806 CR1-Y1_Aves 522 - 127558132 127558806 0 2 617,57, 0,617, -,-, 302903 LINE CR1 1558 chr2 127596808 127598224 CR1-C4 498 + 127596808 127598224 0 2 274,756, 0,660, +,+, 302919 LINE CR1 1558 chr2 127637441 127639103 CR1-Y1_Aves 429 - 127637441 127639103 0 2 1307,204, 0,1458, -,-, 302939 LINE CR1 1558 chr2 127639807 127640174 CR1-Y1_Aves 164 - 127639807 127640174 0 2 44,98, 0,269, -,-, 302941 LINE CR1 1559 chr2 127675580 127676482 CR1-Y4 579 + 127675580 127676482 0 2 180,169, 0,733, +,+, 302966 LINE CR1 1559 chr2 127741558 127743376 CR1-F 539 + 127741558 127743376 0 2 54,1321, 0,497, +,+, 303007 LINE CR1 1559 chr2 127783916 127784983 CR1-D2 588 - 127783916 127784983 0 2 880,180, 0,887, -,-, 303034 LINE CR1 1560 chr2 127867811 127868759 CR1-Y2_Aves 286 + 127867811 127868759 0 2 118,691, 0,257, +,+, 303080 LINE CR1 1560 chr2 127868769 127869216 Char12Mar1_GG 509 - 127868769 127869216 0 2 134,296, 0,151, -,-, 303082 DNA hAT-Charlie 1560 chr2 127921314 127922517 CR1-L3B_Croc 139 + 127921314 127922517 0 2 710,168, 0,1035, +,+, 303115 LINE CR1 1561 chr2 127930217 127931398 CR1-E 741 + 127930217 127931398 0 2 602,579, 0,602, +,+, 303127 LINE CR1 1561 chr2 127931887 127933345 CR1-C4 647 + 127931887 127933345 0 2 742,715, 0,743, +,+, 303128 LINE CR1 1561 chr2 127973156 127974902 CR1-D2 668 + 127973156 127974902 0 2 650,1096, 0,650, +,+, 303156 LINE CR1 1561 chr2 127996307 127996603 CR1-C 817 - 127996307 127996603 0 2 200,96, 0,200, -,-, 303169 LINE CR1 1561 chr2 128007713 128008516 CR1-Y2_Aves 215 - 128007713 128008516 0 2 450,177, 0,626, -,-, 303180 LINE CR1 1561 chr2 128021095 128024601 CR1-L3A_Croc 117 - 128021095 128024601 0 4 430,540,765,434, 0,585,1181,3072, -,-,-,-, 303188 LINE CR1 1561 chr2 128023050 128024074 CR1-X 621 + 128023050 128024074 0 2 674,350, 0,674, +,+, 303189 LINE CR1 1561 chr2 128034747 128038254 CR1-L3A_Croc 117 - 128034747 128038254 0 4 430,540,765,434, 0,585,1181,3073, -,-,-,-, 303195 LINE CR1 1561 chr2 128036702 128037727 CR1-X 620 + 128036702 128037727 0 2 675,350, 0,675, +,+, 303196 LINE CR1 1563 chr2 128216295 128216818 REP131 365 - 128216295 128216818 0 2 56,318, 0,205, -,-, 303287 DNA? DNA? 1563 chr2 128308937 128309801 Char12Mar1_GG 603 - 128308937 128309801 0 2 570,65, 0,799, -,-, 303337 DNA hAT-Charlie 1565 chr2 128469066 128469314 Char12Mar1_GG 519 - 128469066 128469314 0 2 182,66, 0,182, -,-, 303451 DNA hAT-Charlie 1565 chr2 128501406 128503183 CR1-Y1_Aves 272 - 128501406 128503183 0 2 1335,190, 0,1587, -,-, 303465 LINE CR1 1565 chr2 128516152 128516201 (TGTT)n 474 + 128516152 128516201 0 2 11,9, 0,40, +,+, 303476 Simple_repeat Simple_repeat 1565 chr2 128529890 128531667 CR1-Y1_Aves 272 - 128529890 128531667 0 2 1335,190, 0,1587, -,-, 303484 LINE CR1 1566 chr2 128707696 128707923 GGLTR5B 630 - 128707696 128707923 0 2 68,159, 0,68, -,-, 303565 LTR ERVL 1567 chr2 128722983 128724067 CR1-L3B_Croc 155 + 128722983 128724067 0 2 530,192, 0,892, +,+, 303573 LINE CR1 1567 chr2 128729300 128730056 CR1-X 717 - 128729300 128730056 0 2 411,345, 0,411, -,-, 303578 LINE CR1 1568 chr2 128913004 128913882 GGLTR8B 141 - 128913004 128913882 0 2 188,176, 0,702, -,-, 303651 LTR ERVL 1568 chr2 128917237 128917344 GA-rich 360 + 128917237 128917344 0 2 13,61, 0,46, +,+, 303656 Low_complexity Low_complexity 1568 chr2 128956603 128957152 GGLTR8B 548 - 128956603 128957152 0 2 259,286, 0,263, -,-, 303683 LTR ERVL 1569 chr2 129063210 129064249 CR1-F 457 - 129063210 129064249 0 2 849,123, 0,916, -,-, 303734 LINE CR1 1569 chr2 129085113 129085793 CR1-F2 602 + 129085113 129085793 0 2 606,74, 0,606, +,+, 303743 LINE CR1 1570 chr2 129214345 129214445 (GC)n 358 + 129214345 129214445 0 2 6,44, 0,56, +,+, 303809 Simple_repeat Simple_repeat 196 chr2 129367931 129369185 CR1-11_Crp 149 - 129367931 129369185 0 2 306,261, 0,993, -,-, 303873 LINE CR1 1572 chr2 129388448 129389683 CR1-11_Crp 174 + 129388448 129389683 0 2 592,127, 0,1108, +,+, 303885 LINE CR1 1572 chr2 129459763 129461345 CR1-C4 520 - 129459763 129461345 0 2 588,989, 0,593, -,-, 303918 LINE CR1 1573 chr2 129532520 129533089 CR1-11_Crp 349 + 129532520 129533089 0 2 190,376, 0,193, +,+, 303948 LINE CR1 1574 chr2 129659677 129659949 (GGGAA)n 908 + 129659677 129659949 0 2 212,23, 0,249, +,+, 304027 Simple_repeat Simple_repeat 196 chr2 129890262 129894016 CR1-F2 502 + 129890262 129894016 0 2 307,365, 0,3389, +,+, 304143 LINE CR1 1576 chr2 129956463 129961128 CR1-F 663 + 129956463 129961128 0 2 72,1656, 0,3009, +,+, 304185 LINE CR1 1576 chr2 129963728 129963855 GA-rich 670 + 129963728 129963855 0 2 61,31, 0,96, +,+, 304187 Low_complexity Low_complexity 1577 chr2 130104733 130105279 TguLTR5e 362 - 130104733 130105279 0 2 403,80, 0,466, -,-, 304260 LTR ERVL 1578 chr2 130179776 130180757 CR1-11_Crp 200 + 130179776 130180757 0 2 189,363, 0,618, +,+, 304307 LINE CR1 1578 chr2 130189565 130189992 CR1-D2 492 + 130189565 130189992 0 2 286,141, 0,286, +,+, 304313 LINE CR1 1578 chr2 130235024 130236785 CR1-L3A_Croc 225 - 130235024 130236785 0 3 507,50,276, 0,799,1485, -,-,-, 304339 LINE CR1 1578 chr2 130272584 130273388 Char12Mar1_GG 574 - 130272584 130273388 0 2 372,193, 0,611, -,-, 304360 DNA hAT-Charlie 1579 chr2 130364696 130364974 CR1-G 785 - 130364696 130364974 0 2 82,196, 0,82, -,-, 304409 LINE CR1 1579 chr2 130416186 130416247 (ATATA)n 416 + 130416186 130416247 0 2 11,11, 0,50, +,+, 304436 Simple_repeat Simple_repeat 1580 chr2 130442834 130443658 CR1-D2 694 - 130442834 130443658 0 2 69,671, 0,153, -,-, 304451 LINE CR1 1580 chr2 130482286 130484545 CR1-D2 540 - 130482286 130484545 0 2 1025,1234, 0,1025, -,-, 304475 LINE CR1 1580 chr2 130533376 130534068 CR1-C4 548 + 130533376 130534068 0 2 339,353, 0,339, +,+, 304502 LINE CR1 1580 chr2 130536205 130537637 CR1-Y2 317 + 130536205 130537637 0 3 207,189,197, 0,207,1235, +,+,+, 304503 LINE CR1 1580 chr2 130539903 130541227 Char12Mar1_GG 396 - 130539903 130541227 0 2 112,331, 0,993, -,-, 304505 DNA hAT-Charlie 1581 chr2 130607495 130610019 CR1-D2 685 + 130607495 130610019 0 3 161,1119,722, 0,683,1802, +,+,+, 304539 LINE CR1 1581 chr2 130622847 130623015 CR1-F0 723 + 130622847 130623015 0 2 106,62, 0,106, +,+, 304546 LINE CR1 1582 chr2 130727431 130728254 CR1-E 556 + 130727431 130728254 0 2 257,566, 0,257, +,+, 304592 LINE CR1 1582 chr2 130785351 130785801 GA-rich 620 + 130785351 130785801 0 2 119,243, 0,207, +,+, 304627 Low_complexity Low_complexity 1582 chr2 130803109 130804017 CR1-C4 394 - 130803109 130804017 0 2 611,268, 0,640, -,-, 304640 LINE CR1 1583 chr2 130841700 130842377 CR1-C3 718 + 130841700 130842377 0 2 297,376, 0,301, +,+, 304658 LINE CR1 1584 chr2 130993374 130993441 (GTT)n 418 + 130993374 130993441 0 2 6,39, 0,28, +,+, 304746 Simple_repeat Simple_repeat 1584 chr2 131000762 131001913 CR1-Y2_Aves 164 - 131000762 131001913 0 3 422,288,220, 0,510,931, -,-,-, 304752 LINE CR1 1584 chr2 131005671 131006803 CR1-L3A_Croc 100 - 131005671 131006803 0 2 504,520, 0,612, -,-, 304758 LINE CR1 1585 chr2 131090978 131091366 UCON20 400 + 131090978 131091366 0 2 137,67, 0,321, +,+, 304804 Unknown Unknown 1586 chr2 131212552 131212617 A-rich 380 + 131212552 131212617 0 2 17,22, 0,43, +,+, 304865 Low_complexity Low_complexity 1586 chr2 131227564 131228653 CR1-Y2_Aves 405 - 131227564 131228653 0 2 81,986, 0,103, -,-, 304873 LINE CR1 1586 chr2 131306982 131307685 ENS1-LTR 189 + 131306982 131307685 0 2 310,360, 0,343, +,+, 304939 LTR ERVL 1587 chr2 131397453 131399371 CR1-Y2_Aves 158 + 131397453 131399371 0 2 486,856, 0,1062, +,+, 304998 LINE CR1 1588 chr2 131493902 131495672 CR1-C2 196 + 131493902 131495672 0 2 317,258, 0,1512, +,+, 305042 LINE CR1 1588 chr2 131494256 131495339 CR1-C4 558 + 131494256 131495339 0 2 438,354, 0,729, +,+, 305044 LINE CR1 1588 chr2 131540744 131541477 CR1-E 493 - 131540744 131541477 0 2 476,233, 0,500, -,-, 305077 LINE CR1 1589 chr2 131674691 131676040 CR1-F2 491 + 131674691 131676040 0 3 155,87,631, 0,427,718, +,+,+, 305136 LINE CR1 1589 chr2 131696159 131696691 CR1-F2 569 - 131696159 131696691 0 2 494,38, 0,494, -,-, 305153 LINE CR1 1589 chr2 131721168 131723547 CR1-G 740 + 131721168 131723547 0 2 912,1467, 0,912, +,+, 305174 LINE CR1 1590 chr2 131733736 131734703 CR1-Y2 399 + 131733736 131734703 0 2 782,179, 0,788, +,+, 305181 LINE CR1 1590 chr2 131773207 131774265 ENS1B-LTR 465 - 131773207 131774265 0 2 446,399, 0,659, -,-, 305207 LTR ERVL 1591 chr2 131868415 131871415 GGLTR8B 251 + 131868415 131871415 0 2 240,169, 0,2831, +,+, 305279 LTR ERVL 1591 chr2 131949450 131949519 (CTTTCT)n 438 + 131949450 131949519 0 2 22,16, 0,53, +,+, 305348 Simple_repeat Simple_repeat 1591 chr2 131955815 131956615 CR1-D 705 + 131955815 131956615 0 2 353,447, 0,353, +,+, 305351 LINE CR1 1592 chr2 132000599 132001716 CR1-E 494 - 132000599 132001716 0 2 326,791, 0,326, -,-, 305383 LINE CR1 1592 chr2 132024728 132025398 CR1-Y1_Aves 314 + 132024728 132025398 0 3 256,280,85, 0,262,585, +,+,+, 305403 LINE CR1 1592 chr2 132064723 132067907 CR1-H 829 + 132064723 132067907 0 2 948,2235, 0,949, +,+, 305430 LINE CR1 1592 chr2 132075594 132077107 CR1-E 780 - 132075594 132077107 0 3 378,575,550, 0,387,963, -,-,-, 305432 LINE CR1 1592 chr2 132078294 132078848 CR1-F0 111 - 132078294 132078848 0 2 361,174, 0,380, -,-, 305434 LINE CR1 1592 chr2 132085304 132086702 CR1-Y1_Aves 543 + 132085304 132086702 0 2 86,43, 0,1355, +,+, 305438 LINE CR1 1592 chr2 132101776 132102239 (CAGG)n 347 + 132101776 132102239 0 2 216,217, 0,246, +,+, 305455 Simple_repeat Simple_repeat 1592 chr2 132110242 132110705 (CAGG)n 356 + 132110242 132110705 0 2 219,215, 0,248, +,+, 305469 Simple_repeat Simple_repeat 1592 chr2 132110782 132111560 (CAGG)n 379 + 132110782 132111560 0 3 240,210,270, 0,288,508, +,+,+, 305470 Simple_repeat Simple_repeat 1592 chr2 132111522 132111733 (CAGC)n 282 + 132111522 132111733 0 2 48,31, 0,180, +,+, 305471 Simple_repeat Simple_repeat 1592 chr2 132117253 132118176 CR1-Y 737 - 132117253 132118176 0 2 506,383, 0,540, -,-, 305484 LINE CR1 1593 chr2 132133193 132133382 CR1-D2 611 - 132133193 132133382 0 2 61,127, 0,62, -,-, 305497 LINE CR1 1593 chr2 132161061 132162361 Mariner1_GG 514 + 132161061 132162361 0 2 1131,130, 0,1170, +,+, 305511 DNA TcMar-Mariner 1593 chr2 132192985 132193296 CR1-D2 586 - 132192985 132193296 0 2 106,178, 0,133, -,-, 305532 LINE CR1 1593 chr2 132193300 132194465 CR1-D 399 - 132193300 132194465 0 2 159,482, 0,683, -,-, 305534 LINE CR1 1594 chr2 132304332 132305429 GGERVL-B-int 443 - 132304332 132305429 0 2 991,106, 0,991, -,-, 305606 LTR ERVL 1594 chr2 132308369 132309027 Char12Mar1_GG 673 - 132308369 132309027 0 2 66,499, 0,159, -,-, 305609 DNA hAT-Charlie 1595 chr2 132400039 132400808 CR1-X2 568 + 132400039 132400808 0 2 567,202, 0,567, +,+, 305647 LINE CR1 1595 chr2 132417748 132421093 GGLTR10B 947 - 132417748 132421093 0 3 382,2576,382, 0,385,2963, -,-,-, 305660 LTR ERVK 1596 chr2 132562244 132562715 TguLTR5e 242 - 132562244 132562715 0 2 209,227, 0,244, -,-, 305738 LTR ERVL 1597 chr2 132663563 132664349 CR1-Y4 414 + 132663563 132664349 0 2 176,610, 0,176, +,+, 305792 LINE CR1 1597 chr2 132709727 132710105 GGLTR5B 685 + 132709727 132710105 0 2 230,148, 0,230, +,+, 305821 LTR ERVL 1597 chr2 132717471 132723008 CR1-D2 683 - 132717471 132723008 0 2 147,614, 0,4923, -,-, 305829 LINE CR1 1597 chr2 132742571 132744449 CR1-C4 560 - 132742571 132744449 0 2 165,1709, 0,169, -,-, 305842 LINE CR1 1598 chr2 132833525 132834161 GGERV10_LTR 471 - 132833525 132834161 0 2 74,87, 0,549, -,-, 305900 LTR ERVL 1598 chr2 132848641 132849679 CR1-F0 48 + 132848641 132849679 0 2 603,435, 0,603, +,+, 305909 LINE CR1 1598 chr2 132858569 132860434 Charlie12_GG 521 - 132858569 132860434 0 2 1007,857, 0,1008, -,-, 305922 DNA hAT-Charlie 1598 chr2 132865314 132866854 CR1-D2 501 - 132865314 132866854 0 2 1172,356, 0,1184, -,-, 305925 LINE CR1 1598 chr2 132870485 132871469 CR1-E 366 - 132870485 132871469 0 2 173,282, 0,702, -,-, 305926 LINE CR1 1598 chr2 132875873 132876631 CR1-C4 539 - 132875873 132876631 0 2 506,252, 0,506, -,-, 305930 LINE CR1 1599 chr2 132918376 132918425 (TTAT)n 546 + 132918376 132918425 0 2 10,11, 0,38, +,+, 305966 Simple_repeat Simple_repeat 1599 chr2 132927948 132931210 CR1-D 569 - 132927948 132931210 0 2 1327,452, 0,2810, -,-, 305979 LINE CR1 1599 chr2 132934906 132935190 GGLTR8B 190 - 132934906 132935190 0 2 146,138, 0,146, -,-, 305987 LTR ERVL 1599 chr2 132938886 132940156 CR1-H 639 - 132938886 132940156 0 2 153,105, 0,1165, -,-, 305991 LINE CR1 1599 chr2 132965736 132967944 CR1-X1 370 - 132965736 132967944 0 2 184,1024, 0,1184, -,-, 306011 LINE CR1 1599 chr2 132969602 132970397 TguLTR5e 184 + 132969602 132970397 0 2 375,168, 0,627, +,+, 306015 LTR ERVL 1599 chr2 132988293 132989171 CR1-F2 455 + 132988293 132989171 0 2 277,109, 0,769, +,+, 306037 LINE CR1 1599 chr2 132995314 132996013 CR1-C4 405 + 132995314 132996013 0 2 177,522, 0,177, +,+, 306049 LINE CR1 1599 chr2 133013462 133014407 CR1-C4 564 - 133013462 133014407 0 2 521,413, 0,532, -,-, 306061 LINE CR1 1600 chr2 133040931 133041625 GGLTR8B 487 - 133040931 133041625 0 2 264,430, 0,264, -,-, 306088 LTR ERVL 1600 chr2 133059801 133060893 CR1-Y1_Aves 538 + 133059801 133060893 0 2 372,178, 0,914, +,+, 306100 LINE CR1 1600 chr2 133069523 133071075 CR1-C 822 - 133069523 133071075 0 2 338,338, 0,1214, -,-, 306108 LINE CR1 1600 chr2 133071670 133072728 CR1-Y4 565 - 133071670 133072728 0 2 270,531, 0,527, -,-, 306111 LINE CR1 1600 chr2 133094227 133096102 CR1-F2 413 - 133094227 133096102 0 2 798,1077, 0,798, -,-, 306145 LINE CR1 1600 chr2 133097081 133097844 CR1-E 839 + 133097081 133097844 0 2 136,622, 0,141, +,+, 306146 LINE CR1 1600 chr2 133116807 133117698 CR1-Y3 700 + 133116807 133117698 0 2 285,606, 0,285, +,+, 306165 LINE CR1 1600 chr2 133143702 133144010 Char12Mar1_GG 695 - 133143702 133144010 0 2 33,275, 0,33, -,-, 306184 DNA hAT-Charlie 1600 chr2 133154596 133154905 Char12Mar1_GG 703 - 133154596 133154905 0 2 34,275, 0,34, -,-, 306195 DNA hAT-Charlie 24 chr2 133168623 133169402 CR1-H 457 - 133168623 133169402 0 2 35,52, 0,727, -,-, 306217 LINE CR1 1601 chr2 133172410 133172715 GGLTR8B 325 - 133172410 133172715 0 2 59,169, 0,136, -,-, 306221 LTR ERVL 1601 chr2 133183713 133184406 GGLTR5A 314 + 133183713 133184406 0 2 394,141, 0,552, +,+, 306233 LTR ERVL 1601 chr2 133187076 133187426 ENS1-LTR 478 - 133187076 133187426 0 2 255,92, 0,258, -,-, 306238 LTR ERVL 1601 chr2 133190035 133190802 GGLTR8B 481 - 133190035 133190802 0 2 424,343, 0,424, -,-, 306243 LTR ERVL 1601 chr2 133193018 133193189 GGLTR12C 613 + 133193018 133193189 0 2 60,109, 0,62, +,+, 306246 LTR ERVL 1601 chr2 133197115 133198391 CR1-F2 540 - 133197115 133198391 0 2 107,598, 0,678, -,-, 306249 LINE CR1 1601 chr2 133224563 133226762 CR1-C 773 - 133224563 133226762 0 2 624,1561, 0,638, -,-, 306279 LINE CR1 1601 chr2 133248955 133250349 CR1-Y3 689 - 133248955 133250349 0 2 198,696, 0,698, -,-, 306305 LINE CR1 1601 chr2 133250350 133251349 CR1-Y4 498 - 133250350 133251349 0 2 693,288, 0,711, -,-, 306307 LINE CR1 1601 chr2 133263706 133266011 Charlie12_GGa 603 - 133263706 133266011 0 2 86,676, 0,1629, -,-, 306322 DNA hAT-Charlie 1601 chr2 133270337 133270871 GGLTR5A 154 - 133270337 133270871 0 2 62,441, 0,93, -,-, 306330 LTR ERVL 1601 chr2 133277524 133278658 CR1-F2 190 + 133277524 133278658 0 2 471,663, 0,471, +,+, 306340 LINE CR1 1602 chr2 133312359 133313066 CR1-D2 549 - 133312359 133313066 0 2 468,170, 0,537, -,-, 306376 LINE CR1 1602 chr2 133329695 133332132 ENS1-int 780 + 133329695 133332132 0 2 825,1612, 0,825, +,+, 306396 LTR ERVL 1602 chr2 133336432 133340939 CR1-D2 363 - 133336432 133340939 0 3 14,652,131, 0,3595,4376, -,-,-, 306404 LINE CR1 1602 chr2 133336446 133337438 CR1-C2 789 - 133336446 133337438 0 2 65,564, 0,428, -,-, 306405 LINE CR1 1602 chr2 133339398 133339925 ENS1B-LTR 586 + 133339398 133339925 0 2 198,325, 0,202, +,+, 306411 LTR ERVL 1602 chr2 133345596 133346810 CR1-Y1_Aves 441 + 133345596 133346810 0 2 597,168, 0,1046, +,+, 306420 LINE CR1 1602 chr2 133352142 133352212 (T)n 1000 + 133352142 133352212 0 2 29,18, 0,52, +,+, 306432 Simple_repeat Simple_repeat 1602 chr2 133357927 133358904 CR1-D2 486 - 133357927 133358904 0 2 742,228, 0,749, -,-, 306444 LINE CR1 1602 chr2 133358879 133360645 CR1-D 391 - 133358879 133360645 0 2 698,521, 0,1245, -,-, 306446 LINE CR1 1602 chr2 133369453 133369499 (TTTTGT)n 604 + 133369453 133369499 0 2 8,6, 0,40, +,+, 306463 Simple_repeat Simple_repeat 1602 chr2 133372491 133373125 CR1-Y2_Aves 180 + 133372491 133373125 0 2 434,86, 0,548, +,+, 306470 LINE CR1 1602 chr2 133381873 133382452 CR1-H 849 + 133381873 133382452 0 2 39,48, 0,531, +,+, 306488 LINE CR1 1602 chr2 133385583 133387416 CR1-D 638 - 133385583 133387416 0 2 239,577, 0,1256, -,-, 306493 LINE CR1 1602 chr2 133390150 133391701 CR1-E 702 + 133390150 133391701 0 2 150,422, 0,1129, +,+, 306500 LINE CR1 1602 chr2 133391876 133392806 GGLTR5B 641 + 133391876 133392806 0 2 46,63, 0,867, +,+, 306502 LTR ERVL 1602 chr2 133397558 133398044 CR1-C4 422 - 133397558 133398044 0 2 383,52, 0,434, -,-, 306511 LINE CR1 1602 chr2 133410978 133412949 GGLTR5A 358 - 133410978 133412949 0 2 180,295, 0,1676, -,-, 306528 LTR ERVL 200 chr2 133421185 133435515 Char12Mar1_GG 674 - 133421185 133435515 0 2 44,44, 0,14286, -,-, 306543 DNA hAT-Charlie 1603 chr2 133451429 133455558 CR1-X2 539 + 133451429 133455558 0 3 282,317,930, 0,282,3199, +,+,+, 306580 LINE CR1 1603 chr2 133471722 133473657 GGLTR8B 348 - 133471722 133473657 0 3 395,20,367, 0,1515,1568, -,-,-, 306610 LTR ERVL 1603 chr2 133472117 133473255 CR1-H 775 + 133472117 133473255 0 2 234,55, 0,1083, +,+, 306611 LINE CR1 1603 chr2 133480959 133481986 CR1-F2 599 - 133480959 133481986 0 2 686,330, 0,697, -,-, 306629 LINE CR1 1603 chr2 133513827 133524528 CR1-Y1_Aves 133 + 133513827 133524528 0 2 380,129, 0,10572, +,+, 306666 LINE CR1 1603 chr2 133515324 133516939 CR1-H 743 - 133515324 133516939 0 2 1395,220, 0,1395, -,-, 306668 LINE CR1 1603 chr2 133518607 133523310 GGLTR3F2 815 + 133518607 133523310 0 3 236,122,74, 0,4475,4629, +,+,+, 306671 LTR ERVL 1603 chr2 133518868 133523082 GGERVL-B-int 778 + 133518868 133523082 0 2 231,3981, 0,233, +,+, 306673 LTR ERVL 1603 chr2 133526446 133527950 Char12Mar1_GG 532 - 133526446 133527950 0 2 90,280, 0,1224, -,-, 306682 DNA hAT-Charlie 1603 chr2 133551110 133552231 CR1-D2 533 - 133551110 133552231 0 2 259,83, 0,1038, -,-, 306709 LINE CR1 1603 chr2 133558397 133558891 GGLTR5B 358 + 133558397 133558891 0 2 208,247, 0,247, +,+, 306724 LTR ERVL 1604 chr2 133590951 133591816 GGLTR8A 354 - 133590951 133591816 0 2 217,622, 0,243, -,-, 306768 LTR ERVL 1604 chr2 133592479 133595742 GGLTR10D 947 + 133592479 133595742 0 3 241,2676,346, 0,241,2917, +,+,+, 306769 LTR ERVK 1604 chr2 133600847 133601717 GGLTR12A 795 - 133600847 133601717 0 2 213,637, 0,233, -,-, 306776 LTR ERVL 1604 chr2 133651824 133652502 GGLTR12B 434 - 133651824 133652502 0 2 293,113, 0,565, -,-, 306841 LTR ERVL 1604 chr2 133658849 133659833 CR1-X2 411 - 133658849 133659833 0 2 378,604, 0,380, -,-, 306853 LINE CR1 1604 chr2 133678934 133680296 CR1-X2 536 + 133678934 133680296 0 2 247,55, 0,1307, +,+, 306868 LINE CR1 1604 chr2 133682947 133683981 GGLTR5A 525 + 133682947 133683981 0 2 193,60, 0,974, +,+, 306873 LTR ERVL 1604 chr2 133684136 133684211 A-rich 352 + 133684136 133684211 0 2 27,19, 0,56, +,+, 306875 Low_complexity Low_complexity 1605 chr2 133722393 133722900 GGLTR3F2 620 + 133722393 133722900 0 3 231,122,74, 0,265,433, +,+,+, 306925 LTR ERVL 1605 chr2 133794263 133796929 CR1-F 766 - 133794263 133796929 0 2 1830,836, 0,1830, -,-, 307007 LINE CR1 1605 chr2 133814286 133815266 CR1-X 412 - 133814286 133815266 0 2 538,442, 0,538, -,-, 307021 LINE CR1 1606 chr2 133831315 133833122 CR1-C3 629 - 133831315 133833122 0 2 147,1420, 0,387, -,-, 307038 LINE CR1 1606 chr2 133863359 133863825 CR1-X2 517 - 133863359 133863825 0 3 271,54,60, 0,315,406, -,-,-, 307075 LINE CR1 1606 chr2 133868913 133869930 CR1-X2 472 - 133868913 133869930 0 2 669,316, 0,701, -,-, 307079 LINE CR1 1606 chr2 133898916 133904750 GGERV10_LTR 933 + 133898916 133904750 0 3 226,5387,220, 0,227,5614, +,+,+, 307107 LTR ERVL 1606 chr2 133909383 133910036 CR1-X2 407 + 133909383 133910036 0 3 275,237,118, 0,295,535, +,+,+, 307110 LINE CR1 1606 chr2 133918126 133918968 Char12Mar1_GG 456 - 133918126 133918968 0 3 251,251,86, 0,348,756, -,-,-, 307121 DNA hAT-Charlie 1606 chr2 133927227 133928378 GGLTR8B 398 + 133927227 133928378 0 2 906,130, 0,1021, +,+, 307132 LTR ERVL 1606 chr2 133931325 133931767 GGLTR5B 110 - 133931325 133931767 0 2 122,202, 0,240, -,-, 307138 LTR ERVL 1606 chr2 133937537 133938703 CR1-C4 416 + 133937537 133938703 0 2 705,455, 0,711, +,+, 307147 LINE CR1 1606 chr2 133944553 133946261 GGLTR5A 465 + 133944553 133946261 0 2 153,276, 0,1432, +,+, 307153 LTR ERVL 1606 chr2 133947185 133948672 GGLTR8B 381 + 133947185 133948672 0 2 222,790, 0,697, +,+, 307157 LTR ERVL 200 chr2 133955469 133957907 CR1-C3 511 + 133955469 133957907 0 3 583,1212,640, 0,583,1798, +,+,+, 307167 LINE CR1 1607 chr2 133987556 133988702 CR1-X2 111 - 133987556 133988702 0 2 731,320, 0,826, -,-, 307201 LINE CR1 1607 chr2 133988734 133989644 CR1-Y4 466 + 133988734 133989644 0 2 544,366, 0,544, +,+, 307202 LINE CR1 1607 chr2 134045097 134046744 CR1-C 839 - 134045097 134046744 0 2 645,1002, 0,645, -,-, 307273 LINE CR1 1607 chr2 134067674 134067718 (TTTTATT)n 566 + 134067674 134067718 0 2 12,10, 0,34, +,+, 307293 Simple_repeat Simple_repeat 1607 chr2 134083293 134084485 CR1-Y2_Aves 337 + 134083293 134084485 0 2 92,478, 0,714, +,+, 307311 LINE CR1 1607 chr2 134085496 134085951 TguLTR5e 300 - 134085496 134085951 0 2 103,259, 0,196, -,-, 307313 LTR ERVL 200 chr2 134085979 134089642 CR1-F2 655 - 134085979 134089642 0 2 1111,1427, 0,2236, -,-, 307314 LINE CR1 1608 chr2 134098084 134101240 CR1-E 315 + 134098084 134101240 0 2 155,683, 0,2473, +,+, 307327 LINE CR1 1608 chr2 134098224 134100537 CR1-D 597 - 134098224 134100537 0 3 945,943,425, 0,945,1888, -,-,-, 307328 LINE CR1 1608 chr2 134131315 134135056 CR1-D2 573 + 134131315 134135056 0 2 635,278, 0,3463, +,+, 307362 LINE CR1 1608 chr2 134131952 134134760 CR1-D 668 + 134131952 134134760 0 4 151,288,246,926, 0,158,474,1882, +,+,+,+, 307363 LINE CR1 1608 chr2 134132667 134133827 CR1-H 692 - 134132667 134133827 0 2 209,209, 0,951, -,-, 307365 LINE CR1 1608 chr2 134137340 134139393 CR1-D 623 + 134137340 134139393 0 2 245,402, 0,1651, +,+, 307369 LINE CR1 1608 chr2 134155618 134156333 GGLTR5B 277 - 134155618 134156333 0 2 205,400, 0,315, -,-, 307390 LTR ERVL 1608 chr2 134162404 134167056 CR1-C 793 - 134162404 134167056 0 3 2317,608,1201, 0,2843,3451, -,-,-, 307398 LINE CR1 1609 chr2 134239405 134243206 CR1-C3 457 + 134239405 134243206 0 2 2397,1391, 0,2410, +,+, 307481 LINE CR1 1609 chr2 134281981 134282330 GGERV10_LTR 514 - 134281981 134282330 0 2 158,90, 0,259, -,-, 307528 LTR ERVL 1609 chr2 134299434 134302935 CR1-D2 577 - 134299434 134302935 0 2 250,941, 0,2560, -,-, 307552 LINE CR1 1609 chr2 134304744 134305841 CR1-Y2_Aves 281 - 134304744 134305841 0 2 468,526, 0,571, -,-, 307556 LINE CR1 1609 chr2 134310777 134312234 TguLTR5e 539 + 134310777 134312234 0 3 116,37,56, 0,1287,1401, +,+,+, 307565 LTR ERVL 1609 chr2 134310893 134311917 ENS1-LTR 819 - 134310893 134311917 0 3 450,194,238, 0,592,786, -,-,-, 307566 LTR ERVL 1609 chr2 134319773 134322293 GGERVL-C-int 803 - 134319773 134322293 0 3 563,548,1047, 0,563,1473, -,-,-, 307575 LTR ERVL 1609 chr2 134328230 134329476 CR1-X2 439 + 134328230 134329476 0 2 917,329, 0,917, +,+, 307582 LINE CR1 1609 chr2 134330912 134331586 CR1-F2 611 - 134330912 134331586 0 2 97,491, 0,183, -,-, 307585 LINE CR1 1610 chr2 134352385 134352716 CR1-X2 487 - 134352385 134352716 0 2 207,124, 0,207, -,-, 307602 LINE CR1 1610 chr2 134358318 134359581 CR1-B2 446 - 134358318 134359581 0 2 93,829, 0,434, -,-, 307610 LINE CR1 1610 chr2 134369880 134370458 GGLTR8B 226 - 134369880 134370458 0 2 76,473, 0,105, -,-, 307622 LTR ERVL 1610 chr2 134370602 134370780 A-rich 425 + 134370602 134370780 0 2 39,84, 0,94, +,+, 307624 Low_complexity Low_complexity 1610 chr2 134375156 134375536 CR1-Y4 611 - 134375156 134375536 0 2 191,176, 0,204, -,-, 307630 LINE CR1 1610 chr2 134375527 134376738 CR1-Y 719 - 134375527 134376738 0 2 599,611, 0,600, -,-, 307631 LINE CR1 1610 chr2 134376778 134378584 CR1-Y 415 - 134376778 134378584 0 2 509,1297, 0,509, -,-, 307632 LINE CR1 1610 chr2 134388462 134389397 GGLTR5A 257 + 134388462 134389397 0 2 110,317, 0,618, +,+, 307646 LTR ERVL 1610 chr2 134409659 134423841 Char12Mar1_GG 620 - 134409659 134423841 0 2 76,121, 0,14061, -,-, 307672 DNA hAT-Charlie 1610 chr2 134409738 134410774 CR1-D2 586 + 134409738 134410774 0 2 98,513, 0,523, +,+, 307673 LINE CR1 1610 chr2 134418824 134419854 CR1-Y2_Aves 239 - 134418824 134419854 0 2 776,172, 0,858, -,-, 307686 LINE CR1 1610 chr2 134440562 134441248 GGLTR5A 457 + 134440562 134441248 0 2 247,347, 0,339, +,+, 307713 LTR ERVL 1610 chr2 134442333 134443190 CR1-H2 931 + 134442333 134443190 0 2 301,556, 0,301, +,+, 307716 LINE CR1 1610 chr2 134470425 134470940 CR1-Y2_Aves 224 - 134470425 134470940 0 2 286,79, 0,436, -,-, 307746 LINE CR1 1611 chr2 134482568 134484050 CR1-X2 568 + 134482568 134484050 0 2 333,1142, 0,340, +,+, 307764 LINE CR1 1611 chr2 134515462 134516088 CR1-X2 590 - 134515462 134516088 0 2 482,141, 0,485, -,-, 307806 LINE CR1 1611 chr2 134517924 134518523 Char12Mar1_GG 603 - 134517924 134518523 0 2 104,450, 0,149, -,-, 307808 DNA hAT-Charlie 1611 chr2 134533698 134534025 GGERV10_LTR 393 + 134533698 134534025 0 2 76,156, 0,171, +,+, 307823 LTR ERVL 1611 chr2 134534048 134534434 GGLTR8B 171 + 134534048 134534434 0 2 132,194, 0,192, +,+, 307824 LTR ERVL 1611 chr2 134539652 134542017 CR1-Y2_Aves 266 + 134539652 134542017 0 3 1080,211,567, 0,1487,1798, +,+,+, 307831 LINE CR1 1611 chr2 134543616 134545522 CR1-D2 618 - 134543616 134545522 0 2 1717,163, 0,1743, -,-, 307835 LINE CR1 1611 chr2 134559518 134560091 GGLTR8B 282 - 134559518 134560091 0 2 112,315, 0,258, -,-, 307848 LTR ERVL 1611 chr2 134561975 134565690 CR1-C3 669 + 134561975 134565690 0 2 110,2427, 0,1288, +,+, 307852 LINE CR1 1611 chr2 134562085 134563263 ENS1-int 787 - 134562085 134563263 0 2 941,237, 0,941, -,-, 307853 LTR ERVL 1611 chr2 134569265 134571576 CR1-X 303 - 134569265 134571576 0 3 170,205,324, 0,561,1987, -,-,-, 307856 LINE CR1 1612 chr2 134617032 134617578 Char12Mar1_GG 464 + 134617032 134617578 0 2 372,140, 0,406, +,+, 307916 DNA hAT-Charlie 1612 chr2 134625245 134625696 CR1-Y1_Aves 504 + 134625245 134625696 0 2 146,68, 0,383, +,+, 307926 LINE CR1 1612 chr2 134627535 134628334 GGLTR12C 518 - 134627535 134628334 0 2 242,102, 0,697, -,-, 307929 LTR ERVL 1612 chr2 134658430 134659082 CR1-Y4 628 - 134658430 134659082 0 2 599,53, 0,599, -,-, 307961 LINE CR1 1612 chr2 134681265 134681948 CR1-F2 449 - 134681265 134681948 0 2 563,100, 0,583, -,-, 307985 LINE CR1 1612 chr2 134695321 134696058 CR1-Y4 486 + 134695321 134696058 0 2 225,512, 0,225, +,+, 307995 LINE CR1 1613 chr2 134794715 134796180 GGLTR8B 362 + 134794715 134796180 0 2 743,333, 0,1132, +,+, 308103 LTR ERVL 1613 chr2 134803228 134805503 CR1-H 824 + 134803228 134805503 0 2 1838,437, 0,1838, +,+, 308113 LINE CR1 1613 chr2 134806314 134807456 CR1-C2 801 - 134806314 134807456 0 2 782,144, 0,998, -,-, 308117 LINE CR1 1613 chr2 134812877 134814218 CR1-C3 658 + 134812877 134814218 0 2 431,209, 0,1132, +,+, 308125 LINE CR1 1613 chr2 134825140 134825695 CR1-Y2 460 - 134825140 134825695 0 2 79,476, 0,79, -,-, 308131 LINE CR1 1614 chr2 134902917 134903435 GGLTR8A 265 + 134902917 134903435 0 2 388,101, 0,417, +,+, 308207 LTR ERVL 1614 chr2 134939750 134940357 CR1-Y2_Aves 341 + 134939750 134940357 0 2 193,320, 0,287, +,+, 308229 LINE CR1 1614 chr2 134968441 134969065 CR1-L3B_Croc 369 - 134968441 134969065 0 2 74,82, 0,542, -,-, 308250 LINE CR1 1615 chr2 135067297 135067670 DNA-12_Crp 248 . 135067297 135067670 0 2 336,37, 0,336, +,-, 308300 DNA DNA 1616 chr2 135142465 135144027 CR1-L3A_Croc 269 - 135142465 135144027 0 3 291,174,67, 0,834,1495, -,-,-, 308358 LINE CR1 1616 chr2 135163483 135164216 CR1-D2 715 + 135163483 135164216 0 2 520,38, 0,695, +,+, 308383 LINE CR1 1616 chr2 135169189 135169779 CR1-L3A_Croc 419 - 135169189 135169779 0 2 73,231, 0,359, -,-, 308387 LINE CR1 1616 chr2 135190656 135191135 CR1-8_Crp 150 + 135190656 135191135 0 2 331,96, 0,383, +,+, 308400 LINE CR1 1616 chr2 135203337 135203735 GGLTR8B 299 - 135203337 135203735 0 2 235,139, 0,259, -,-, 308408 LTR ERVL 1617 chr2 135366631 135367874 Mariner1_GG 617 - 135366631 135367874 0 2 810,402, 0,841, -,-, 308497 DNA TcMar-Mariner 1618 chr2 135405356 135406391 CR1-D2 672 - 135405356 135406391 0 2 569,466, 0,569, -,-, 308519 LINE CR1 1618 chr2 135408502 135409253 CR1-F2 247 + 135408502 135409253 0 2 242,492, 0,259, +,+, 308522 LINE CR1 1618 chr2 135409678 135409748 (TAT)n 352 + 135409678 135409748 0 2 11,15, 0,55, +,+, 308524 Simple_repeat Simple_repeat 1618 chr2 135425426 135427903 CR1-D2 685 + 135425426 135427903 0 2 98,111, 0,2366, +,+, 308535 LINE CR1 1619 chr2 135531366 135532748 CR1-C3 736 + 135531366 135532748 0 2 310,928, 0,454, +,+, 308588 LINE CR1 1619 chr2 135573421 135574171 GGLTR8B 591 - 135573421 135574171 0 2 539,189, 0,561, -,-, 308609 LTR ERVL 1620 chr2 135673840 135674474 CR1-D2 707 - 135673840 135674474 0 2 190,139, 0,495, -,-, 308669 LINE CR1 1620 chr2 135677901 135678288 CR1-B2 556 + 135677901 135678288 0 2 107,280, 0,107, +,+, 308673 LINE CR1 1620 chr2 135736597 135737387 CR1-3_Croc 163 + 135736597 135737387 0 2 170,128, 0,662, +,+, 308712 LINE CR1 1620 chr2 135777678 135778436 CR1-F2 387 - 135777678 135778436 0 2 178,427, 0,331, -,-, 308734 LINE CR1 1621 chr2 135791389 135791682 Char12Mar1_GG 698 - 135791389 135791682 0 2 133,160, 0,133, -,-, 308746 DNA hAT-Charlie 1621 chr2 135805321 135805866 GGLTR10C-int 347 + 135805321 135805866 0 2 372,173, 0,372, +,+, 308754 LTR ERVK 1621 chr2 135817273 135818128 CR1-F2 531 - 135817273 135818128 0 2 203,640, 0,215, -,-, 308761 LINE CR1 1622 chr2 135928508 135929346 CR1-G 163 + 135928508 135929346 0 2 92,202, 0,636, +,+, 308831 LINE CR1 1622 chr2 135930819 135932139 CR1-Y 395 - 135930819 135932139 0 3 437,95,205, 0,1020,1115, -,-,-, 308837 LINE CR1 1622 chr2 135997099 135997733 CR1-L3B_Croc 343 + 135997099 135997733 0 3 53,339,128, 0,103,506, +,+,+, 308872 LINE CR1 1623 chr2 136140164 136140445 CR1-F2 409 + 136140164 136140445 0 2 24,188, 0,93, +,+, 308937 LINE CR1 1623 chr2 136143359 136144809 CR1-L3B_Croc 188 - 136143359 136144809 0 2 429,135, 0,1315, -,-, 308940 LINE CR1 1623 chr2 136143431 136144565 CR1-L3B_Croc 147 - 136143431 136144565 0 2 401,261, 0,873, -,-, 308941 LINE CR1 1624 chr2 136194616 136197234 CR1-E 762 + 136194616 136197234 0 2 1751,862, 0,1756, +,+, 308971 LINE CR1 1624 chr2 136234325 136237013 CR1-E 656 + 136234325 136237013 0 2 936,156, 0,2532, +,+, 308988 LINE CR1 1624 chr2 136249458 136249868 CR1-D2 635 - 136249458 136249868 0 2 74,336, 0,74, -,-, 308997 LINE CR1 1624 chr2 136274570 136275535 CR1-F0 894 - 136274570 136275535 0 2 930,35, 0,930, -,-, 309011 LINE CR1 1624 chr2 136292454 136292617 L2-3_Crp 164 + 136292454 136292617 0 2 55,70, 0,93, +,+, 309018 LINE L2 1625 chr2 136320112 136320798 CR1-Y2_Aves 376 - 136320112 136320798 0 2 239,433, 0,253, -,-, 309032 LINE CR1 1625 chr2 136343424 136343552 CR1-X2 820 - 136343424 136343552 0 2 45,83, 0,45, -,-, 309049 LINE CR1 1626 chr2 136493786 136495129 CR1-Y4 163 - 136493786 136495129 0 3 463,446,323, 0,466,1020, -,-,-, 309141 LINE CR1 1626 chr2 136532668 136533502 CR1-Y2_Aves 338 + 136532668 136533502 0 2 670,93, 0,741, +,+, 309168 LINE CR1 1626 chr2 136538937 136540513 CR1-F 883 + 136538937 136540513 0 2 93,1483, 0,93, +,+, 309171 LINE CR1 1627 chr2 136587544 136589068 Mariner1_GG 647 - 136587544 136589068 0 2 1105,210, 0,1314, -,-, 309213 DNA TcMar-Mariner 1627 chr2 136597067 136598239 CR1-L3A_Croc 248 + 136597067 136598239 0 2 302,331, 0,841, +,+, 309221 LINE CR1 1627 chr2 136679198 136679607 GGLTR8B 451 + 136679198 136679607 0 2 325,84, 0,325, +,+, 309265 LTR ERVL 1627 chr2 136696632 136696729 (TA)n 374 + 136696632 136696729 0 2 29,10, 0,87, +,+, 309271 Simple_repeat Simple_repeat 1627 chr2 136699258 136699600 CR1-E 280 - 136699258 136699600 0 2 106,210, 0,132, -,-, 309274 LINE CR1 1628 chr2 136744010 136745848 CR1-F2 555 + 136744010 136745848 0 2 362,1045, 0,793, +,+, 309300 LINE CR1 1629 chr2 136889631 136890178 CR1-Y2_Aves 427 + 136889631 136890178 0 2 265,121, 0,426, +,+, 309390 LINE CR1 1629 chr2 136913892 136914208 CR1-C3 731 - 136913892 136914208 0 2 58,258, 0,58, -,-, 309409 LINE CR1 1630 chr2 136987329 136988268 CR1-Y1_Aves 443 - 136987329 136988268 0 2 751,188, 0,751, -,-, 309458 LINE CR1 1630 chr2 136988921 136990412 CR1-Y2_Aves 191 - 136988921 136990412 0 2 204,413, 0,1078, -,-, 309459 LINE CR1 1630 chr2 137002004 137003929 CR1-D2 612 - 137002004 137003929 0 3 318,270,459, 0,761,1466, -,-,-, 309471 LINE CR1 1631 chr2 137172657 137173013 CR1-X2 475 - 137172657 137173013 0 2 239,72, 0,284, -,-, 309566 LINE CR1 1631 chr2 137204639 137207033 CR1-Y1_Aves 367 - 137204639 137207033 0 2 115,117, 0,2277, -,-, 309596 LINE CR1 1632 chr2 137286009 137286149 CR1-B2 635 - 137286009 137286149 0 2 12,88, 0,52, -,-, 309651 LINE CR1 1633 chr2 137365112 137366669 GGLTR3F1 793 - 137365112 137366669 0 2 1335,221, 0,1336, -,-, 309709 LTR ERVL 1633 chr2 137371176 137371705 GGLTR3F1 936 + 137371176 137371705 0 2 36,493, 0,36, +,+, 309711 LTR ERVL 1633 chr2 137439898 137439978 (TTTTCCC)n 430 + 137439898 137439978 0 2 17,6, 0,74, +,+, 309752 Simple_repeat Simple_repeat 1633 chr2 137471851 137472292 CR1-C4 597 + 137471851 137472292 0 2 148,293, 0,148, +,+, 309775 LINE CR1 1634 chr2 137516647 137518163 CR1-C3 685 - 137516647 137518163 0 2 1249,264, 0,1252, -,-, 309806 LINE CR1 1634 chr2 137520120 137525687 CR1-D 494 - 137520120 137525687 0 2 826,509, 0,5058, -,-, 309807 LINE CR1 1634 chr2 137531820 137532755 CR1-C 866 - 137531820 137532755 0 2 76,859, 0,76, -,-, 309818 LINE CR1 1634 chr2 137534050 137534457 CR1-X 656 + 137534050 137534457 0 2 53,354, 0,53, +,+, 309820 LINE CR1 1634 chr2 137555739 137557214 CR1-F2 491 + 137555739 137557214 0 2 559,874, 0,601, +,+, 309840 LINE CR1 1634 chr2 137570971 137571022 (ACAA)n 578 + 137570971 137571022 0 2 6,13, 0,38, +,+, 309848 Simple_repeat Simple_repeat 1634 chr2 137578598 137579101 GGLTR5A 541 - 137578598 137579101 0 2 337,66, 0,437, -,-, 309854 LTR ERVL 1635 chr2 137659696 137660043 CR1-C 736 + 137659696 137660043 0 2 268,54, 0,293, +,+, 309893 LINE CR1 1635 chr2 137660554 137661370 CR1-E 432 - 137660554 137661370 0 2 414,402, 0,414, -,-, 309895 LINE CR1 1635 chr2 137664941 137668577 CR1-Y4 512 - 137664941 137668577 0 3 149,1470,41, 0,150,3595, -,-,-, 309900 LINE CR1 1635 chr2 137666563 137668529 CR1-F2 383 - 137666563 137668529 0 3 495,199,994, 0,495,972, -,-,-, 309901 LINE CR1 1635 chr2 137675619 137676569 CR1-F2 440 + 137675619 137676569 0 2 239,68, 0,882, +,+, 309905 LINE CR1 1635 chr2 137692632 137693094 CR1-Y2_Aves 291 - 137692632 137693094 0 2 220,242, 0,220, -,-, 309918 LINE CR1 1635 chr2 137696515 137696974 CR1-H 850 + 137696515 137696974 0 2 271,188, 0,271, +,+, 309925 LINE CR1 1635 chr2 137741148 137741552 CR1-E 665 - 137741148 137741552 0 2 245,153, 0,251, -,-, 309958 LINE CR1 1636 chr2 137813006 137813400 GGLTR8B 566 + 137813006 137813400 0 2 234,158, 0,236, +,+, 309997 LTR ERVL 1636 chr2 137866458 137866536 (TTTGT)n 540 + 137866458 137866536 0 2 9,11, 0,67, +,+, 310035 Simple_repeat Simple_repeat 1637 chr2 137954334 137955382 Mariner1_GG 677 - 137954334 137955382 0 2 274,774, 0,274, -,-, 310107 DNA TcMar-Mariner 1638 chr2 138048849 138049659 CR1-Y4 688 - 138048849 138049659 0 2 146,479, 0,331, -,-, 310169 LINE CR1 1638 chr2 138100026 138100748 CR1-C4 480 + 138100026 138100748 0 2 433,271, 0,451, +,+, 310198 LINE CR1 1638 chr2 138105236 138105478 GGLTR5B 560 - 138105236 138105478 0 2 171,71, 0,171, -,-, 310200 LTR ERVL 1639 chr2 138231589 138232117 CR1-F2 579 + 138231589 138232117 0 2 322,204, 0,324, +,+, 310253 LINE CR1 204 chr2 138280129 138281467 CR1-D2 546 - 138280129 138281467 0 2 47,360, 0,978, -,-, 310285 LINE CR1 1641 chr2 138472024 138474977 CR1-F2 490 + 138472024 138474977 0 2 169,257, 0,2696, +,+, 310423 LINE CR1 1641 chr2 138484178 138484868 CR1-E 832 - 138484178 138484868 0 2 194,445, 0,245, -,-, 310432 LINE CR1 1641 chr2 138487461 138488483 CR1-C3 772 - 138487461 138488483 0 2 556,466, 0,556, -,-, 310435 LINE CR1 1641 chr2 138493380 138494163 CR1-D 664 - 138493380 138494163 0 2 59,221, 0,562, -,-, 310440 LINE CR1 1641 chr2 138506946 138507815 CR1-C 849 - 138506946 138507815 0 2 158,711, 0,158, -,-, 310449 LINE CR1 1642 chr2 138576964 138578361 CR1-F2 557 + 138576964 138578361 0 2 110,594, 0,803, +,+, 310482 LINE CR1 1642 chr2 138577269 138577806 CR1-F2 500 - 138577269 138577806 0 2 84,196, 0,341, -,-, 310484 LINE CR1 1642 chr2 138579100 138579168 (GGC)n 488 + 138579100 138579168 0 2 6,7, 0,61, +,+, 310488 Simple_repeat Simple_repeat 1642 chr2 138581379 138581629 GGLTR5A 477 - 138581379 138581629 0 2 72,148, 0,102, -,-, 310494 LTR ERVL 1643 chr2 138718272 138720621 CR1-L3A_Croc 438 + 138718272 138720621 0 2 128,78, 0,2271, +,+, 310542 LINE CR1 1643 chr2 138754248 138755087 CR1-Y2_Aves 470 - 138754248 138755087 0 2 163,347, 0,492, -,-, 310577 LINE CR1 1643 chr2 138782787 138783685 CR1-Y1_Aves 413 - 138782787 138783685 0 2 661,237, 0,661, -,-, 310595 LINE CR1 1643 chr2 138802532 138802932 CR1-E 763 + 138802532 138802932 0 2 197,194, 0,206, +,+, 310611 LINE CR1 1644 chr2 138855857 138857835 CR1-X2 448 - 138855857 138857835 0 2 302,103, 0,1875, -,-, 310643 LINE CR1 1644 chr2 138877067 138877845 CR1-F2 671 + 138877067 138877845 0 2 637,141, 0,637, +,+, 310656 LINE CR1 1644 chr2 138877979 138880516 CR1-Y1_Aves 237 - 138877979 138880516 0 2 346,164, 0,2373, -,-, 310657 LINE CR1 1644 chr2 138878318 138879331 CR1-F2 473 + 138878318 138879331 0 2 889,101, 0,912, +,+, 310659 LINE CR1 1645 chr2 138980976 138981586 CR1-F2 587 - 138980976 138981586 0 2 355,255, 0,355, -,-, 310705 LINE CR1 1645 chr2 138998398 138999691 CR1-Y2_Aves 317 - 138998398 138999691 0 3 174,838,144, 0,309,1149, -,-,-, 310719 LINE CR1 1645 chr2 139022966 139023934 CR1-F2 537 + 139022966 139023934 0 2 779,189, 0,779, +,+, 310732 LINE CR1 1645 chr2 139045242 139046619 CR1-X2 470 - 139045242 139046619 0 2 216,1161, 0,216, -,-, 310740 LINE CR1 1646 chr2 139082341 139082886 CR1-X2 432 - 139082341 139082886 0 2 217,328, 0,217, -,-, 310758 LINE CR1 1646 chr2 139108061 139111506 CR1-F2 504 + 139108061 139111506 0 2 59,125, 0,3320, +,+, 310778 LINE CR1 1646 chr2 139137025 139137885 CR1-Y 432 - 139137025 139137885 0 2 316,453, 0,407, -,-, 310796 LINE CR1 1646 chr2 139144260 139145492 CR1-D2 741 - 139144260 139145492 0 2 634,168, 0,1064, -,-, 310803 LINE CR1 1646 chr2 139174355 139177736 CR1-L3A_Croc 178 + 139174355 139177736 0 4 133,226,208,406, 0,661,2318,2975, +,+,+,+, 310828 LINE CR1 1646 chr2 139185161 139185248 (GTTTCT)n 326 + 139185161 139185248 0 2 28,18, 0,69, +,+, 310835 Simple_repeat Simple_repeat 1647 chr2 139219630 139219762 A-rich 524 + 139219630 139219762 0 2 50,60, 0,72, +,+, 310859 Low_complexity Low_complexity 1647 chr2 139222511 139223132 GGLTR5B 324 + 139222511 139223132 0 2 270,322, 0,299, +,+, 310864 LTR ERVL 1647 chr2 139235028 139235417 CR1-C 868 + 139235028 139235417 0 2 38,351, 0,38, +,+, 310874 LINE CR1 1647 chr2 139239832 139240855 CR1-L3B_Croc 297 + 139239832 139240855 0 3 72,249,127, 0,470,896, +,+,+, 310882 LINE CR1 1647 chr2 139243844 139245195 CR1-C4 552 - 139243844 139245195 0 2 301,963, 0,388, -,-, 310887 LINE CR1 1647 chr2 139249451 139250312 CR1-F2 340 - 139249451 139250312 0 2 155,706, 0,155, -,-, 310892 LINE CR1 1647 chr2 139271309 139272232 CR1-F2 246 + 139271309 139272232 0 2 623,300, 0,623, +,+, 310905 LINE CR1 1648 chr2 139335199 139335673 REP131 134 - 139335199 139335673 0 2 168,147, 0,327, -,-, 310949 DNA? DNA? 1648 chr2 139416991 139418168 GGLTR5A 435 + 139416991 139418168 0 2 262,202, 0,975, +,+, 311005 LTR ERVL 1648 chr2 139421172 139422149 CR1-E 393 + 139421172 139422149 0 2 137,840, 0,137, +,+, 311014 LINE CR1 1648 chr2 139431509 139432360 CR1-C4 601 + 139431509 139432360 0 2 733,118, 0,733, +,+, 311025 LINE CR1 1648 chr2 139435372 139435434 (CAACAA)n 614 + 139435372 139435434 0 2 17,28, 0,34, +,+, 311027 Simple_repeat Simple_repeat 1648 chr2 139438891 139439501 CR1-Y2_Aves 219 - 139438891 139439501 0 2 140,431, 0,179, -,-, 311030 LINE CR1 1649 chr2 139471066 139472809 CR1-C4 583 - 139471066 139472809 0 2 130,1613, 0,130, -,-, 311047 LINE CR1 1649 chr2 139528418 139529159 Mariner1_GG 672 - 139528418 139529159 0 2 117,624, 0,117, -,-, 311083 DNA TcMar-Mariner 1650 chr2 139685639 139688357 CR1-Y2_Aves 170 + 139685639 139688357 0 2 186,271, 0,2447, +,+, 311179 LINE CR1 1651 chr2 139727187 139727722 CR1-Y1_Aves 482 + 139727187 139727722 0 2 486,49, 0,486, +,+, 311209 LINE CR1 1651 chr2 139752896 139753238 CR1-D2 668 - 139752896 139753238 0 2 11,290, 0,52, -,-, 311233 LINE CR1 1651 chr2 139777053 139778269 CR1-F2 652 - 139777053 139778269 0 2 481,600, 0,616, -,-, 311252 LINE CR1 1651 chr2 139789766 139789840 (TTGTT)n 394 + 139789766 139789840 0 2 11,22, 0,52, +,+, 311265 Simple_repeat Simple_repeat 1651 chr2 139819274 139819351 (TTTATT)n 252 + 139819274 139819351 0 2 16,39, 0,38, +,+, 311285 Simple_repeat Simple_repeat 1651 chr2 139828568 139829615 GGLTR8A 492 - 139828568 139829615 0 2 115,512, 0,535, -,-, 311293 LTR ERVL 1651 chr2 139837478 139838059 CR1-F2 546 + 139837478 139838059 0 2 132,415, 0,166, +,+, 311301 LINE CR1 1652 chr2 139860773 139860951 CR1-D2 738 + 139860773 139860951 0 2 117,48, 0,130, +,+, 311326 LINE CR1 1653 chr2 140078268 140078800 X2_LINE 349 + 140078268 140078800 0 2 127,129, 0,403, +,+, 311503 LINE CR1 1653 chr2 140109670 140110269 CR1-D2 666 + 140109670 140110269 0 2 354,209, 0,390, +,+, 311523 LINE CR1 1654 chr2 140165008 140165620 CR1-Y2_Aves 218 - 140165008 140165620 0 2 167,178, 0,434, -,-, 311557 LINE CR1 1654 chr2 140207008 140207547 CR1-C4 542 + 140207008 140207547 0 2 234,303, 0,236, +,+, 311592 LINE CR1 1655 chr2 140262641 140263386 CR1-F2 618 - 140262641 140263386 0 2 441,304, 0,441, -,-, 311638 LINE CR1 1655 chr2 140264569 140264915 CR1-11_Crp 342 - 140264569 140264915 0 2 149,82, 0,264, -,-, 311641 LINE CR1 1655 chr2 140296082 140297054 CR1-E 425 - 140296082 140297054 0 2 883,89, 0,883, -,-, 311671 LINE CR1 1655 chr2 140298699 140299889 CR1-E 725 + 140298699 140299889 0 2 742,159, 0,1031, +,+, 311675 LINE CR1 1655 chr2 140331923 140332902 Mariner1_GG 543 - 140331923 140332902 0 2 404,566, 0,413, -,-, 311702 DNA TcMar-Mariner 1655 chr2 140354768 140355079 CR1-Y3 738 + 140354768 140355079 0 2 38,273, 0,38, +,+, 311726 LINE CR1 1655 chr2 140359693 140361273 CR1-C4 580 - 140359693 140361273 0 2 606,83, 0,1497, -,-, 311727 LINE CR1 1655 chr2 140360295 140361190 CR1-E 600 - 140360295 140361190 0 2 281,614, 0,281, -,-, 311728 LINE CR1 1657 chr2 140513610 140515325 CR1-E 420 - 140513610 140515325 0 2 223,513, 0,1202, -,-, 311843 LINE CR1 1657 chr2 140531693 140532445 CR1-L3A_Croc 211 + 140531693 140532445 0 2 98,394, 0,358, +,+, 311861 LINE CR1 1657 chr2 140552177 140552488 CR1-X2 452 + 140552177 140552488 0 2 168,142, 0,169, +,+, 311873 LINE CR1 1657 chr2 140571861 140573209 CR1-D 358 + 140571861 140573209 0 2 238,1110, 0,238, +,+, 311891 LINE CR1 1658 chr2 140660870 140661821 CR1-C4 646 - 140660870 140661821 0 2 257,694, 0,257, -,-, 311931 LINE CR1 1659 chr2 140786800 140787096 (GGATAG)n 414 + 140786800 140787096 0 2 16,250, 0,46, +,+, 311998 Simple_repeat Simple_repeat 1659 chr2 140795322 140796291 CR1-Y4 536 - 140795322 140796291 0 2 350,619, 0,350, -,-, 312005 LINE CR1 1659 chr2 140797600 140798314 CR1-C4 568 - 140797600 140798314 0 2 533,181, 0,533, -,-, 312007 LINE CR1 1659 chr2 140853728 140854133 CR1-D2 788 - 140853728 140854133 0 2 270,129, 0,276, -,-, 312048 LINE CR1 1659 chr2 140880184 140880273 (T)n 817 + 140880184 140880273 0 2 24,37, 0,52, +,+, 312064 Simple_repeat Simple_repeat 1659 chr2 140889011 140889381 CR1-X 456 + 140889011 140889381 0 2 296,64, 0,306, +,+, 312071 LINE CR1 1659 chr2 140889869 140890884 CR1-C4 619 - 140889869 140890884 0 2 11,961, 0,54, -,-, 312073 LINE CR1 1660 chr2 140931370 140931994 CR1-11_Crp 229 + 140931370 140931994 0 2 181,181, 0,443, +,+, 312108 LINE CR1 1660 chr2 140933178 140934826 CR1-G 820 - 140933178 140934826 0 2 110,395, 0,1253, -,-, 312110 LINE CR1 1660 chr2 140948000 140948658 CR1-F2 545 + 140948000 140948658 0 2 110,548, 0,110, +,+, 312118 LINE CR1 1660 chr2 140977170 140978466 CR1-X2 586 + 140977170 140978466 0 2 754,358, 0,938, +,+, 312142 LINE CR1 1660 chr2 140997540 140997663 A-rich 553 + 140997540 140997663 0 2 35,29, 0,94, +,+, 312156 Low_complexity Low_complexity 1660 chr2 140999473 141000000 CR1-C4 603 - 140999473 141000000 0 2 243,284, 0,243, -,-, 312159 LINE CR1 1661 chr2 141048449 141048597 (ATACTAT)n 418 + 141048449 141048597 0 2 6,6, 0,142, +,+, 312195 Simple_repeat Simple_repeat 1661 chr2 141055192 141057263 CR1-Y4 423 + 141055192 141057263 0 3 20,498,646, 0,927,1425, +,+,+, 312200 LINE CR1 1661 chr2 141063768 141065102 CR1-X2 486 - 141063768 141065102 0 2 187,1144, 0,190, -,-, 312205 LINE CR1 1661 chr2 141079245 141080027 CR1-F2 459 + 141079245 141080027 0 2 445,95, 0,687, +,+, 312217 LINE CR1 1661 chr2 141097803 141099894 CR1-F 791 + 141097803 141099894 0 3 451,344,1269, 0,478,822, +,+,+, 312233 LINE CR1 1662 chr2 141170134 141170182 (CTTT)n 398 + 141170134 141170182 0 2 9,9, 0,39, +,+, 312300 Simple_repeat Simple_repeat 1662 chr2 141172436 141173135 Mariner1_GG 659 - 141172436 141173135 0 2 143,554, 0,145, -,-, 312302 DNA TcMar-Mariner 1662 chr2 141253072 141254530 CR1-E 705 - 141253072 141254530 0 2 1257,201, 0,1257, -,-, 312366 LINE CR1 1663 chr2 141329970 141331929 CR1-Y2_Aves 354 + 141329970 141331929 0 2 329,1620, 0,339, +,+, 312432 LINE CR1 1663 chr2 141335899 141336573 CR1-C4 605 - 141335899 141336573 0 2 216,458, 0,216, -,-, 312436 LINE CR1 1663 chr2 141382506 141382827 CR1-C3 732 + 141382506 141382827 0 2 279,36, 0,285, +,+, 312464 LINE CR1 1663 chr2 141401070 141401475 CR1-D2 587 + 141401070 141401475 0 2 39,326, 0,79, +,+, 312480 LINE CR1 1664 chr2 141452359 141453176 CR1-Y1_Aves 434 - 141452359 141453176 0 2 381,166, 0,651, -,-, 312519 LINE CR1 1664 chr2 141461234 141461574 CR1-G 925 - 141461234 141461574 0 2 261,40, 0,300, -,-, 312528 LINE CR1 1664 chr2 141495562 141495909 CR1-F2 563 - 141495562 141495909 0 2 216,131, 0,216, -,-, 312550 LINE CR1 1664 chr2 141537700 141538156 CR1-D2 533 - 141537700 141538156 0 2 390,66, 0,390, -,-, 312577 LINE CR1 1665 chr2 141567038 141567296 GGLTR8B 211 + 141567038 141567296 0 2 92,162, 0,96, +,+, 312594 LTR ERVL 1665 chr2 141639624 141640308 CR1-G 796 - 141639624 141640308 0 2 101,58, 0,626, -,-, 312649 LINE CR1 1665 chr2 141679342 141680766 CR1-L3B_Croc 67 + 141679342 141680766 0 2 466,524, 0,900, +,+, 312682 LINE CR1 1666 chr2 141721773 141723647 CR1-Y2_Aves 315 + 141721773 141723647 0 4 84,180,181,549, 0,84,615,1325, +,+,+,+, 312722 LINE CR1 1666 chr2 141726191 141729095 CR1-D2 567 - 141726191 141729095 0 2 74,160, 0,2744, -,-, 312725 LINE CR1 1666 chr2 141746246 141746747 CR1-C3 572 + 141746246 141746747 0 2 182,122, 0,379, +,+, 312739 LINE CR1 1666 chr2 141805475 141805909 GGERVL-A-int 220 - 141805475 141805909 0 2 194,151, 0,283, -,-, 312778 LTR ERVL 1666 chr2 141810923 141812211 CR1-D2 587 - 141810923 141812211 0 2 266,1022, 0,266, -,-, 312785 LINE CR1 1668 chr2 142054984 142055359 CR1-D2 560 + 142054984 142055359 0 2 296,13, 0,362, +,+, 312951 LINE CR1 1668 chr2 142077264 142079309 CR1-G 624 + 142077264 142079309 0 2 257,77, 0,1968, +,+, 312967 LINE CR1 1669 chr2 142108561 142108837 CR1-D2 518 - 142108561 142108837 0 2 200,38, 0,238, -,-, 312984 LINE CR1 1669 chr2 142167176 142167870 CR1-D 685 + 142167176 142167870 0 2 633,61, 0,633, +,+, 313021 LINE CR1 1669 chr2 142170583 142170771 CR1-C4 554 - 142170583 142170771 0 2 112,65, 0,123, -,-, 313023 LINE CR1 1669 chr2 142204716 142205033 ENS1-LTR 967 + 142204716 142205033 0 2 105,212, 0,105, +,+, 313052 LTR ERVL 1670 chr2 142272797 142273511 Char12Mar1_GG 667 - 142272797 142273511 0 2 388,155, 0,559, -,-, 313108 DNA hAT-Charlie 1671 chr2 142410967 142415191 CR1-F2 477 - 142410967 142415191 0 2 180,321, 0,3903, -,-, 313216 LINE CR1 1671 chr2 142455751 142456503 CR1-F2 691 + 142455751 142456503 0 2 261,491, 0,261, +,+, 313247 LINE CR1 1671 chr2 142471248 142472782 CR1-F2 497 - 142471248 142472782 0 2 68,110, 0,1424, -,-, 313258 LINE CR1 1672 chr2 142554858 142557482 CR1-X2 526 + 142554858 142557482 0 2 93,365, 0,2259, +,+, 313332 LINE CR1 1672 chr2 142554949 142557116 CR1-D2 579 + 142554949 142557116 0 2 978,720, 0,1447, +,+, 313333 LINE CR1 1672 chr2 142563925 142565702 CR1-H 385 - 142563925 142565702 0 5 861,214,161,105,113, 0,1145,1359,1550,1664, -,-,-,-,-, 313342 LINE CR1 1672 chr2 142581386 142582061 CR1-Y4 238 + 142581386 142582061 0 2 95,304, 0,371, +,+, 313358 LINE CR1 1673 chr2 142619727 142620898 CR1-F2 602 + 142619727 142620898 0 2 453,718, 0,453, +,+, 313386 LINE CR1 1673 chr2 142641871 142642918 CR1-F2 534 + 142641871 142642918 0 2 576,456, 0,591, +,+, 313401 LINE CR1 1673 chr2 142647887 142648359 CR1-Y4 473 - 142647887 142648359 0 2 85,379, 0,93, -,-, 313404 LINE CR1 1673 chr2 142665424 142665749 GGERV10_LTR 699 + 142665424 142665749 0 2 61,160, 0,165, +,+, 313416 LTR ERVL 1675 chr2 142909736 142910139 CR1-D2 505 + 142909736 142910139 0 3 43,12,141, 0,156,262, +,+,+, 313539 LINE CR1 1675 chr2 142919652 142920123 CR1-D2 688 - 142919652 142920123 0 2 377,94, 0,377, -,-, 313546 LINE CR1 1675 chr2 142980219 142980753 TguLTR5e 320 + 142980219 142980753 0 2 408,91, 0,443, +,+, 313604 LTR ERVL 1676 chr2 143003334 143004430 CR1-B2 728 - 143003334 143004430 0 2 224,487, 0,609, -,-, 313625 LINE CR1 1676 chr2 143019141 143020332 CR1-B2 300 - 143019141 143020332 0 2 345,472, 0,719, -,-, 313642 LINE CR1 1676 chr2 143027347 143027644 GGLTR5A 564 + 143027347 143027644 0 2 105,188, 0,109, +,+, 313649 LTR ERVL 1676 chr2 143103117 143105091 CR1-Y2_Aves 224 + 143103117 143105091 0 2 806,823, 0,1151, +,+, 313713 LINE CR1 1676 chr2 143105640 143107202 Char12Mar1_GG 666 - 143105640 143107202 0 2 149,417, 0,1145, -,-, 313715 DNA hAT-Charlie 1676 chr2 143118689 143118844 (TCTCC)n 612 + 143118689 143118844 0 2 19,69, 0,86, +,+, 313728 Simple_repeat Simple_repeat 1677 chr2 143186310 143188246 CR1-D 570 - 143186310 143188246 0 2 658,478, 0,1458, -,-, 313795 LINE CR1 1677 chr2 143220820 143221834 Mariner1_GG 342 - 143220820 143221834 0 2 419,594, 0,420, -,-, 313823 DNA TcMar-Mariner 1678 chr2 143305558 143308244 CR1-Y2_Aves 264 - 143305558 143308244 0 2 205,274, 0,2412, -,-, 313879 LINE CR1 1678 chr2 143306410 143307752 CR1-D2 488 + 143306410 143307752 0 2 327,993, 0,349, +,+, 313881 LINE CR1 1678 chr2 143313703 143314128 CR1-Y2_Aves 339 + 143313703 143314128 0 2 183,106, 0,319, +,+, 313886 LINE CR1 1679 chr2 143402991 143403712 GGLTR8B 376 - 143402991 143403712 0 2 301,323, 0,398, -,-, 313965 LTR ERVL 1679 chr2 143428727 143429429 CR1-F2 500 + 143428727 143429429 0 3 169,371,151, 0,169,551, +,+,+, 313990 LINE CR1 1679 chr2 143450180 143450605 Char12Mar1_GG 576 - 143450180 143450605 0 2 340,57, 0,368, -,-, 314011 DNA hAT-Charlie 1679 chr2 143473439 143480971 CR1-C4 639 + 143473439 143480971 0 3 245,196,60, 0,3517,7472, +,+,+, 314031 LINE CR1 1680 chr2 143541589 143542887 CR1-Y2_Aves 304 + 143541589 143542887 0 2 490,713, 0,585, +,+, 314108 LINE CR1 1680 chr2 143572852 143573061 GGLTR5A 648 - 143572852 143573061 0 2 96,112, 0,97, -,-, 314145 LTR ERVL 1680 chr2 143612994 143614061 CR1-E 728 - 143612994 143614061 0 2 116,951, 0,116, -,-, 314197 LINE CR1 1681 chr2 143680756 143681620 CR1-L3B_Croc 288 - 143680756 143681620 0 2 162,371, 0,493, -,-, 314257 LINE CR1 1681 chr2 143692536 143693029 GGLTR5A 299 + 143692536 143693029 0 2 260,134, 0,359, +,+, 314274 LTR ERVL 1681 chr2 143725471 143726758 CR1-X 423 - 143725471 143726758 0 2 75,355, 0,932, -,-, 314317 LINE CR1 1681 chr2 143742954 143743658 CR1-F0 292 - 143742954 143743658 0 2 374,330, 0,374, -,-, 314340 LINE CR1 1681 chr2 143766852 143767281 (GGGAA)n 856 + 143766852 143767281 0 2 180,194, 0,235, +,+, 314371 Simple_repeat Simple_repeat 1681 chr2 143769602 143770404 CR1-X2 547 + 143769602 143770404 0 3 315,70,403, 0,315,399, +,+,+, 314374 LINE CR1 1681 chr2 143774054 143775009 CR1-C4 409 + 143774054 143775009 0 2 573,352, 0,603, +,+, 314376 LINE CR1 1682 chr2 143786948 143787170 CR1-D2 515 + 143786948 143787170 0 2 130,70, 0,152, +,+, 314391 LINE CR1 1682 chr2 143794244 143798231 GGERVK1-int 977 - 143794244 143798231 0 3 241,447,3299, 0,241,688, -,-,-, 314399 LTR ERVK 1682 chr2 143800403 143806581 GGERVK1-int 978 - 143800403 143806581 0 4 242,447,5248,241, 0,242,689,5937, -,-,-,-, 314401 LTR ERVK 1682 chr2 143844711 143845257 GGLTR8B 647 - 143844711 143845257 0 2 239,307, 0,239, -,-, 314447 LTR ERVL 1682 chr2 143846137 143847008 CR1-X2 636 - 143846137 143847008 0 3 334,199,294, 0,378,577, -,-,-, 314450 LINE CR1 1682 chr2 143872726 143873089 CR1-D2 487 - 143872726 143873089 0 2 199,65, 0,298, -,-, 314471 LINE CR1 1682 chr2 143882034 143884611 CR1-F 531 + 143882034 143884611 0 2 201,541, 0,2036, +,+, 314488 LINE CR1 1682 chr2 143896756 143897142 CR1-D2 659 + 143896756 143897142 0 2 54,332, 0,54, +,+, 314506 LINE CR1 1682 chr2 143902299 143902427 A-rich 414 + 143902299 143902427 0 2 38,55, 0,73, +,+, 314513 Low_complexity Low_complexity 1682 chr2 143913672 143913719 (TTTTGT)n 508 + 143913672 143913719 0 2 6,12, 0,35, +,+, 314531 Simple_repeat Simple_repeat 1683 chr2 143921383 143921704 GGERV10_LTR 546 + 143921383 143921704 0 2 67,158, 0,163, +,+, 314542 LTR ERVL 1683 chr2 143922724 143924338 CR1-X1 586 - 143922724 143924338 0 3 511,566,65, 0,802,1549, -,-,-, 314545 LINE CR1 1683 chr2 143927543 143929292 CR1-C2 476 + 143927543 143929292 0 3 87,80,491, 0,944,1258, +,+,+, 314550 LINE CR1 1683 chr2 143959420 143962802 GGLTR10B 920 - 143959420 143962802 0 3 381,2592,381, 0,384,3001, -,-,-, 314581 LTR ERVK 1683 chr2 143970669 143971216 CR1-Y1_Aves 453 + 143970669 143971216 0 2 396,151, 0,396, +,+, 314588 LINE CR1 1683 chr2 143980350 143981666 CR1-E 640 + 143980350 143981666 0 2 662,654, 0,662, +,+, 314597 LINE CR1 1683 chr2 144019281 144020111 CR1-Y3 538 + 144019281 144020111 0 2 336,456, 0,374, +,+, 314641 LINE CR1 1684 chr2 144055494 144057014 CR1-D2 514 - 144055494 144057014 0 2 651,869, 0,651, -,-, 314696 LINE CR1 1684 chr2 144070705 144071264 GGLTR5B 568 + 144070705 144071264 0 2 436,90, 0,469, +,+, 314711 LTR ERVL 1684 chr2 144076895 144087093 Char12Mar1_GG 516 - 144076895 144087093 0 2 57,295, 0,9903, -,-, 314715 DNA hAT-Charlie 1684 chr2 144090413 144090702 LSU-rRNA_Hsa 469 + 144090413 144090702 0 2 145,104, 0,185, +,+, 314731 rRNA rRNA 1684 chr2 144106090 144106706 CR1-F2 491 + 144106090 144106706 0 3 175,140,301, 0,175,315, +,+,+, 314746 LINE CR1 1684 chr2 144154218 144155587 CR1-F 498 + 144154218 144155587 0 2 264,1105, 0,264, +,+, 314790 LINE CR1 1684 chr2 144155742 144156660 CR1-D2 587 - 144155742 144156660 0 2 861,56, 0,862, -,-, 314791 LINE CR1 1684 chr2 144158316 144164128 GGLTR3F1 901 + 144158316 144164128 0 2 494,5317, 0,495, +,+, 314793 LTR ERVL 1684 chr2 144164128 144164658 GGLTR3F1 940 + 144164128 144164658 0 2 36,494, 0,36, +,+, 314794 LTR ERVL 1685 chr2 144191713 144192799 ENS3-int 452 + 144191713 144192799 0 2 151,935, 0,151, +,+, 314817 LTR ERVL 1685 chr2 144212092 144212750 CR1-X1 560 + 144212092 144212750 0 2 163,495, 0,163, +,+, 314841 LINE CR1 1685 chr2 144238897 144238971 (T)n 884 + 144238897 144238971 0 2 29,28, 0,46, +,+, 314881 Simple_repeat Simple_repeat 1685 chr2 144239924 144240994 CR1-F2 505 + 144239924 144240994 0 2 347,723, 0,347, +,+, 314883 LINE CR1 1685 chr2 144257148 144258344 CR1-F2 423 - 144257148 144258344 0 3 285,554,329, 0,313,867, -,-,-, 314906 LINE CR1 1685 chr2 144269550 144269896 CR1-D2 553 + 144269550 144269896 0 2 65,166, 0,180, +,+, 314918 LINE CR1 1686 chr2 144311371 144313228 CR1-C2 595 - 144311371 144313228 0 2 1408,278, 0,1579, -,-, 314969 LINE CR1 1686 chr2 144435352 144436294 GGLTR8B 557 + 144435352 144436294 0 2 640,89, 0,853, +,+, 315076 LTR ERVL 1687 chr2 144448323 144452189 CR1-C2 614 + 144448323 144452189 0 3 51,89,171, 0,89,3695, +,+,+, 315086 LINE CR1 1687 chr2 144458815 144459463 CR1-F2 469 - 144458815 144459463 0 2 79,416, 0,232, -,-, 315095 LINE CR1 1687 chr2 144463407 144465384 CR1-C2 601 + 144463407 144465384 0 2 520,526, 0,1451, +,+, 315099 LINE CR1 1687 chr2 144476538 144477229 CR1-X1 522 - 144476538 144477229 0 2 373,314, 0,377, -,-, 315108 LINE CR1 1687 chr2 144494601 144494825 CR1-D2 638 + 144494601 144494825 0 2 56,168, 0,56, +,+, 315126 LINE CR1 1687 chr2 144517346 144518648 CR1-E 760 + 144517346 144518648 0 3 253,708,341, 0,253,961, +,+,+, 315145 LINE CR1 1687 chr2 144522314 144524055 CR1-F2 444 - 144522314 144524055 0 2 84,241, 0,1500, -,-, 315148 LINE CR1 1687 chr2 144548272 144548912 CR1-D2 164 + 144548272 144548912 0 2 364,195, 0,445, +,+, 315171 LINE CR1 1687 chr2 144563317 144564636 Charlie12_GG 649 - 144563317 144564636 0 2 103,585, 0,734, -,-, 315184 DNA hAT-Charlie 1687 chr2 144569230 144570267 CR1-Y3 721 - 144569230 144570267 0 2 516,521, 0,516, -,-, 315191 LINE CR1 1688 chr2 144583883 144584065 CR1-X2 553 + 144583883 144584065 0 2 46,134, 0,48, +,+, 315202 LINE CR1 1688 chr2 144609629 144610073 CR1-F2 516 + 144609629 144610073 0 2 62,62, 0,382, +,+, 315227 LINE CR1 1688 chr2 144617237 144619855 CR1-F2 353 - 144617237 144619855 0 2 144,487, 0,2131, -,-, 315234 LINE CR1 1688 chr2 144634396 144635356 CR1-Y4 663 - 144634396 144635356 0 2 758,202, 0,758, -,-, 315251 LINE CR1 1688 chr2 144672144 144673422 CR1-H2 606 + 144672144 144673422 0 2 1049,229, 0,1049, +,+, 315277 LINE CR1 1688 chr2 144679634 144680990 CR1-C4 539 - 144679634 144680990 0 2 253,1103, 0,253, -,-, 315283 LINE CR1 1689 chr2 144784939 144788196 CR1-Y2_Aves 376 - 144784939 144788196 0 2 248,180, 0,3077, -,-, 315341 LINE CR1 1689 chr2 144824395 144825157 CR1-E 743 + 144824395 144825157 0 3 94,419,248, 0,95,514, +,+,+, 315377 LINE CR1 1690 chr2 144870959 144871436 CR1-H 813 - 144870959 144871436 0 2 299,177, 0,300, -,-, 315409 LINE CR1 1690 chr2 144927281 144927848 GGLTR5B 610 + 144927281 144927848 0 2 147,379, 0,188, +,+, 315451 LTR ERVL 1690 chr2 144940069 144944919 CR1-D2 575 - 144940069 144944919 0 2 155,554, 0,4296, -,-, 315461 LINE CR1 1690 chr2 144962484 144962582 CR1-C3 622 - 144962484 144962582 0 2 24,36, 0,62, -,-, 315477 LINE CR1 1691 chr2 144979241 144980936 CR1-3_Croc 248 + 144979241 144980936 0 3 191,107,174, 0,834,1521, +,+,+, 315495 LINE CR1 1691 chr2 144979563 144979662 (A)n 877 + 144979563 144979662 0 2 32,19, 0,80, +,+, 315496 Simple_repeat Simple_repeat 1691 chr2 145038400 145039422 CR1-L3A_Croc 226 + 145038400 145039422 0 2 289,132, 0,890, +,+, 315540 LINE CR1 1691 chr2 145080556 145081912 CR1-Y2_Aves 561 - 145080556 145081912 0 2 140,87, 0,1269, -,-, 315588 LINE CR1 1691 chr2 145080694 145081806 CR1-D2 676 + 145080694 145081806 0 2 367,557, 0,555, +,+, 315589 LINE CR1 1691 chr2 145089821 145090611 GGLTR8B 273 - 145089821 145090611 0 2 190,263, 0,527, -,-, 315602 LTR ERVL 1692 chr2 145126126 145126587 CR1-X1 641 - 145126126 145126587 0 2 395,66, 0,395, -,-, 315621 LINE CR1 1692 chr2 145133195 145134174 CR1-H2 872 - 145133195 145134174 0 2 370,603, 0,376, -,-, 315624 LINE CR1 1692 chr2 145155150 145160259 CR1-D2 618 + 145155150 145160259 0 2 369,288, 0,4821, +,+, 315641 LINE CR1 1692 chr2 145186604 145187063 GGLTR5B 168 + 145186604 145187063 0 2 155,260, 0,199, +,+, 315665 LTR ERVL 1693 chr2 145233441 145236933 CR1-F0 402 - 145233441 145236933 0 2 112,271, 0,3221, -,-, 315696 LINE CR1 1693 chr2 145261891 145264735 CR1-F 269 + 145261891 145264735 0 2 85,357, 0,2487, +,+, 315728 LINE CR1 1693 chr2 145328419 145331870 CR1-B2 471 + 145328419 145331870 0 2 162,470, 0,2981, +,+, 315785 LINE CR1 1693 chr2 145333494 145334199 CR1-Y1_Aves 386 - 145333494 145334199 0 2 78,627, 0,78, -,-, 315792 LINE CR1 1694 chr2 145391520 145392359 CR1-Y4 553 - 145391520 145392359 0 2 596,102, 0,737, -,-, 315824 LINE CR1 1694 chr2 145425203 145426093 CR1-D2 706 - 145425203 145426093 0 2 286,468, 0,422, -,-, 315849 LINE CR1 1694 chr2 145433272 145434086 CR1-F2 579 - 145433272 145434086 0 2 74,531, 0,283, -,-, 315856 LINE CR1 1694 chr2 145455702 145456103 CR1-C 687 - 145455702 145456103 0 2 45,70, 0,331, -,-, 315874 LINE CR1 1694 chr2 145474278 145474930 CR1-C4 614 + 145474278 145474930 0 3 147,81,369, 0,147,283, +,+,+, 315889 LINE CR1 1695 chr2 145499106 145500000 CR1-C4 573 + 145499106 145500000 0 2 562,328, 0,566, +,+, 315910 LINE CR1 1695 chr2 145523311 145523634 CR1-Y2_Aves 227 - 145523311 145523634 0 2 127,73, 0,250, -,-, 315930 LINE CR1 1695 chr2 145535610 145535869 CR1-L3B_Croc 271 - 145535610 145535869 0 2 157,102, 0,157, -,-, 315940 LINE CR1 1695 chr2 145558369 145559103 CR1-Y2_Aves 414 + 145558369 145559103 0 2 552,182, 0,552, +,+, 315956 LINE CR1 1695 chr2 145564081 145565190 CR1-C 805 + 145564081 145565190 0 2 139,55, 0,1054, +,+, 315960 LINE CR1 1695 chr2 145573435 145573797 CR1-F2 365 + 145573435 145573797 0 2 172,190, 0,172, +,+, 315967 LINE CR1 1695 chr2 145597372 145600880 CR1-E 717 + 145597372 145600880 0 2 1076,130, 0,3378, +,+, 315983 LINE CR1 1696 chr2 145636778 145637648 CR1-D 696 + 145636778 145637648 0 2 630,232, 0,638, +,+, 316011 LINE CR1 1696 chr2 145644318 145645587 CR1-F2 310 - 145644318 145645587 0 2 655,162, 0,1107, -,-, 316017 LINE CR1 1696 chr2 145646484 145647300 CR1-D2 391 - 145646484 145647300 0 3 340,107,361, 0,340,455, -,-,-, 316019 LINE CR1 1696 chr2 145659319 145660180 GGLTR8B 298 + 145659319 145660180 0 2 197,168, 0,693, +,+, 316026 LTR ERVL 1696 chr2 145706277 145708208 CR1-F2 565 - 145706277 145708208 0 3 1179,578,174, 0,1179,1757, -,-,-, 316054 LINE CR1 1696 chr2 145714841 145715779 CR1-F2 240 - 145714841 145715779 0 2 365,384, 0,554, -,-, 316060 LINE CR1 1696 chr2 145745734 145746128 CR1-X1 618 + 145745734 145746128 0 2 293,93, 0,301, +,+, 316086 LINE CR1 1697 chr2 145800547 145802275 CR1-E 363 + 145800547 145802275 0 2 24,76, 0,1652, +,+, 316116 LINE CR1 1697 chr2 145881314 145882161 CR1-E 422 + 145881314 145882161 0 2 124,402, 0,445, +,+, 316172 LINE CR1 1698 chr2 145899701 145901512 GGLTR3F1 807 + 145899701 145901512 0 2 494,1316, 0,495, +,+, 316183 LTR ERVL 1698 chr2 145901506 145902352 GGLTR3F1 980 + 145901506 145902352 0 2 353,493, 0,353, +,+, 316184 LTR ERVL 1698 chr2 146005093 146005648 CR1-C3 609 + 146005093 146005648 0 2 517,38, 0,517, +,+, 316236 LINE CR1 1698 chr2 146007602 146007872 CR1-C2 779 + 146007602 146007872 0 2 71,199, 0,71, +,+, 316237 LINE CR1 1699 chr2 146047070 146047972 CR1-L3B_Croc 172 + 146047070 146047972 0 2 375,162, 0,740, +,+, 316281 LINE CR1 1699 chr2 146049716 146050325 CR1-Y1_Aves 550 - 146049716 146050325 0 2 192,205, 0,404, -,-, 316286 LINE CR1 1699 chr2 146089974 146090255 GGLTR8A 387 - 146089974 146090255 0 2 87,113, 0,168, -,-, 316325 LTR ERVL 1699 chr2 146092598 146093083 CR1-C 763 + 146092598 146093083 0 2 144,341, 0,144, +,+, 316327 LINE CR1 1700 chr2 146186101 146186279 CR1-F2 569 + 146186101 146186279 0 2 67,111, 0,67, +,+, 316379 LINE CR1 1700 chr2 146198963 146200074 CR1-Y1_Aves 395 + 146198963 146200074 0 2 120,252, 0,859, +,+, 316388 LINE CR1 1700 chr2 146221145 146221276 CR1-X2 666 + 146221145 146221276 0 2 58,73, 0,58, +,+, 316406 LINE CR1 1700 chr2 146229608 146229950 CR1-C4 677 + 146229608 146229950 0 2 110,226, 0,116, +,+, 316415 LINE CR1 1700 chr2 146257375 146262864 CR1-F2 483 - 146257375 146262864 0 2 103,92, 0,5397, -,-, 316437 LINE CR1 1700 chr2 146270487 146271701 CR1-C4 651 - 146270487 146271701 0 3 213,673,326, 0,215,888, -,-,-, 316445 LINE CR1 1701 chr2 146303763 146304497 CR1-D2 663 - 146303763 146304497 0 3 586,110,38, 0,586,696, -,-,-, 316472 LINE CR1 1701 chr2 146312467 146312974 CR1-D2 640 + 146312467 146312974 0 2 342,165, 0,342, +,+, 316476 LINE CR1 1701 chr2 146341880 146342393 CR1-F2 557 + 146341880 146342393 0 2 132,85, 0,428, +,+, 316501 LINE CR1 1701 chr2 146399146 146399605 CR1-C4 639 + 146399146 146399605 0 2 385,74, 0,385, +,+, 316555 LINE CR1 1702 chr2 146460404 146461422 CR1-Y3 644 - 146460404 146461422 0 2 100,862, 0,156, -,-, 316618 LINE CR1 1702 chr2 146481405 146484389 CR1-C4 593 - 146481405 146484389 0 2 193,334, 0,2650, -,-, 316634 LINE CR1 1702 chr2 146484475 146487221 CR1-Y2_Aves 430 - 146484475 146487221 0 2 123,856, 0,1890, -,-, 316635 LINE CR1 1702 chr2 146531162 146532208 CR1-D2 618 - 146531162 146532208 0 2 84,943, 0,103, -,-, 316677 LINE CR1 1703 chr2 146556168 146556637 CR1-E 656 + 146556168 146556637 0 2 135,45, 0,424, +,+, 316705 LINE CR1 1703 chr2 146557327 146560393 CR1-Y 569 - 146557327 146560393 0 2 102,152, 0,2914, -,-, 316707 LINE CR1 1703 chr2 146560395 146561427 CR1-Y4 519 + 146560395 146561427 0 2 315,338, 0,694, +,+, 316709 LINE CR1 1703 chr2 146571517 146577328 Char12Mar1_GG 703 - 146571517 146577328 0 3 534,44,47, 0,586,5764, -,-,-, 316717 DNA hAT-Charlie 1703 chr2 146574180 146574791 CR1-C2 386 + 146574180 146574791 0 2 205,406, 0,205, +,+, 316719 LINE CR1 1703 chr2 146598823 146599626 CR1-Y2_Aves 280 - 146598823 146599626 0 2 256,154, 0,649, -,-, 316741 LINE CR1 1703 chr2 146622316 146622410 CR1-G 584 - 146622316 146622410 0 2 12,41, 0,53, -,-, 316773 LINE CR1 1703 chr2 146650274 146650845 CR1-F2 911 + 146650274 146650845 0 2 216,347, 0,224, +,+, 316807 LINE CR1 1703 chr2 146661094 146661240 A-rich 612 + 146661094 146661240 0 2 35,53, 0,93, +,+, 316821 Low_complexity Low_complexity 1704 chr2 146713363 146713583 CR1-X2 643 - 146713363 146713583 0 2 112,108, 0,112, -,-, 316881 LINE CR1 1704 chr2 146722107 146722958 CR1-D2 658 + 146722107 146722958 0 2 547,304, 0,547, +,+, 316892 LINE CR1 1704 chr2 146763259 146766834 CR1-X2 563 + 146763259 146766834 0 2 133,73, 0,3502, +,+, 316930 LINE CR1 1705 chr2 146806516 146807419 CR1-Y4 557 + 146806516 146807419 0 2 99,102, 0,801, +,+, 316966 LINE CR1 1705 chr2 146829034 146830341 CR1-D2 407 + 146829034 146830341 0 3 385,23,857, 0,427,450, +,+,+, 316987 LINE CR1 1705 chr2 146863206 146865808 CR1-F2 367 + 146863206 146865808 0 2 113,103, 0,2499, +,+, 317016 LINE CR1 1705 chr2 146873535 146879368 GGERV10_LTR 990 - 146873535 146879368 0 3 220,5385,227, 0,220,5606, -,-,-, 317023 LTR ERVL 1705 chr2 146909338 146910000 GGLTR8B 456 + 146909338 146910000 0 2 324,155, 0,507, +,+, 317053 LTR ERVL 1706 chr2 146946576 146946943 CR1-L3B_Croc 281 - 146946576 146946943 0 2 166,136, 0,231, -,-, 317094 LINE CR1 1706 chr2 146953522 146954010 GGLTR5A 295 + 146953522 146954010 0 2 248,152, 0,336, +,+, 317101 LTR ERVL 1706 chr2 146959204 146962382 CR1-C3 491 - 146959204 146962382 0 2 116,242, 0,2936, -,-, 317106 LINE CR1 1706 chr2 146977269 146977725 CR1-F2 555 - 146977269 146977725 0 2 21,94, 0,362, -,-, 317130 LINE CR1 1706 chr2 147012000 147012516 CR1-Y2_Aves 188 - 147012000 147012516 0 2 159,277, 0,239, -,-, 317156 LINE CR1 1706 chr2 147016688 147017975 CR1-Y3 761 + 147016688 147017975 0 2 208,399, 0,888, +,+, 317162 LINE CR1 1707 chr2 147110605 147111385 CR1-X1 763 + 147110605 147111385 0 2 51,396, 0,384, +,+, 317248 LINE CR1 1707 chr2 147126857 147128951 CR1-L3B_Croc 266 + 147126857 147128951 0 3 211,389,167, 0,998,1927, +,+,+, 317265 LINE CR1 1707 chr2 147134271 147135171 CR1-Y2_Aves 383 + 147134271 147135171 0 2 133,520, 0,380, +,+, 317274 LINE CR1 1707 chr2 147163989 147165001 CR1-F2 718 - 147163989 147165001 0 2 695,59, 0,953, -,-, 317301 LINE CR1 1708 chr2 147202295 147203815 CR1-F2 383 - 147202295 147203815 0 2 103,126, 0,1394, -,-, 317356 LINE CR1 1708 chr2 147235267 147236505 CR1-Y2_Aves 354 - 147235267 147236505 0 6 112,199,177,99,119,215, 0,112,461,656,755,1023, -,-,-,-,-,-, 317389 LINE CR1 1708 chr2 147260304 147261146 CR1-H2 655 + 147260304 147261146 0 3 273,473,96, 0,273,746, +,+,+, 317415 LINE CR1 1708 chr2 147278722 147280522 Mariner1_GG 611 - 147278722 147280522 0 2 1317,38, 0,1762, -,-, 317428 DNA TcMar-Mariner 1708 chr2 147289096 147289383 CR1-X1 650 - 147289096 147289383 0 2 145,74, 0,213, -,-, 317435 LINE CR1 1709 chr2 147327283 147328122 CR1-L3B_Croc 216 - 147327283 147328122 0 2 309,149, 0,690, -,-, 317482 LINE CR1 1709 chr2 147358127 147358452 CR1-Y4 451 + 147358127 147358452 0 2 273,52, 0,273, +,+, 317511 LINE CR1 1709 chr2 147358786 147359228 CR1-Y2_Aves 235 - 147358786 147359228 0 2 286,111, 0,331, -,-, 317513 LINE CR1 1709 chr2 147368167 147368248 A-rich 472 + 147368167 147368248 0 2 18,34, 0,47, +,+, 317523 Low_complexity Low_complexity 1709 chr2 147383414 147383758 CR1-X2 623 - 147383414 147383758 0 2 189,155, 0,189, -,-, 317540 LINE CR1 1709 chr2 147387436 147389582 CR1-D2 695 + 147387436 147389582 0 2 140,58, 0,2088, +,+, 317545 LINE CR1 1709 chr2 147392791 147393936 CR1-Y4 644 + 147392791 147393936 0 2 132,423, 0,722, +,+, 317548 LINE CR1 1709 chr2 147430181 147430229 (TTGTTTT)n 492 + 147430181 147430229 0 2 7,16, 0,32, +,+, 317593 Simple_repeat Simple_repeat 1709 chr2 147435396 147436723 CR1-L3A_Croc 327 + 147435396 147436723 0 2 219,106, 0,1221, +,+, 317602 LINE CR1 1710 chr2 147505198 147505454 CR1-X2 717 - 147505198 147505454 0 2 115,141, 0,115, -,-, 317667 LINE CR1 1710 chr2 147508835 147509468 CR1-F2 452 - 147508835 147509468 0 2 175,424, 0,209, -,-, 317671 LINE CR1 1710 chr2 147537870 147538680 CR1-C4 620 - 147537870 147538680 0 2 378,164, 0,646, -,-, 317696 LINE CR1 1710 chr2 147586224 147586672 CR1-Y2_Aves 192 - 147586224 147586672 0 2 214,234, 0,214, -,-, 317747 LINE CR1 1711 chr2 147601655 147602110 GGLTR3F2 598 - 147601655 147602110 0 2 198,231, 0,224, -,-, 317765 LTR ERVL 1711 chr2 147607757 147610874 CR1-L3B_Croc 222 - 147607757 147610874 0 4 239,463,327,270, 0,433,2171,2847, -,-,-,-, 317772 LINE CR1 1711 chr2 147641254 147643050 CR1-C4 610 + 147641254 147643050 0 3 296,772,598, 0,402,1198, +,+,+, 317804 LINE CR1 1711 chr2 147684419 147684451 (TCCCC)n 558 + 147684419 147684451 0 2 7,7, 0,25, +,+, 317857 Simple_repeat Simple_repeat 1712 chr2 147769044 147769192 CR1-F0 650 + 147769044 147769192 0 2 87,61, 0,87, +,+, 317925 LINE CR1 1712 chr2 147788771 147789911 CR1-C3 693 + 147788771 147789911 0 2 788,352, 0,788, +,+, 317941 LINE CR1 1713 chr2 147854140 147854578 CR1-X2 607 - 147854140 147854578 0 2 270,47, 0,391, -,-, 317984 LINE CR1 1713 chr2 147872048 147872843 CR1-L3A_Croc 244 + 147872048 147872843 0 2 516,137, 0,658, +,+, 318005 LINE CR1 1713 chr2 147898264 147900011 CR1-Y2_Aves 172 + 147898264 147900011 0 2 1335,280, 0,1467, +,+, 318034 LINE CR1 1713 chr2 147937753 147938564 CR1-F2 369 - 147937753 147938564 0 2 318,493, 0,318, -,-, 318073 LINE CR1 1714 chr2 147982414 147982713 CR1-F2 480 - 147982414 147982713 0 2 166,128, 0,171, -,-, 318121 LINE CR1 1714 chr2 147991437 147992605 CR1-F2 559 + 147991437 147992605 0 2 264,109, 0,1059, +,+, 318130 LINE CR1 1714 chr2 148028560 148031926 CR1-F0 481 + 148028560 148031926 0 2 373,89, 0,3277, +,+, 318175 LINE CR1 1714 chr2 148053956 148054896 CR1-F2 497 + 148053956 148054896 0 2 370,92, 0,848, +,+, 318201 LINE CR1 1714 chr2 148062805 148062938 A-rich 463 + 148062805 148062938 0 2 52,42, 0,91, +,+, 318213 Low_complexity Low_complexity 1714 chr2 148083742 148083909 CR1-C2 838 - 148083742 148083909 0 2 121,46, 0,121, -,-, 318240 LINE CR1 214 chr2 148106468 148111569 CR1-F0 483 - 148106468 148111569 0 3 78,131,164, 0,3362,4937, -,-,-, 318265 LINE CR1 1715 chr2 148131687 148131889 CR1-C3 700 + 148131687 148131889 0 2 146,14, 0,188, +,+, 318295 LINE CR1 1715 chr2 148153481 148153772 CR1-X1 589 - 148153481 148153772 0 2 92,170, 0,121, -,-, 318325 LINE CR1 1715 chr2 148171950 148172193 CR1-Y1_Aves 448 + 148171950 148172193 0 2 154,89, 0,154, +,+, 318352 LINE CR1 1715 chr2 148188306 148189185 CR1-D2 562 - 148188306 148189185 0 2 613,266, 0,613, -,-, 318373 LINE CR1 1715 chr2 148199175 148199451 CR1-D2 493 - 148199175 148199451 0 2 72,204, 0,72, -,-, 318384 LINE CR1 1715 chr2 148220729 148221139 ENS1B-LTR 354 + 148220729 148221139 0 2 228,182, 0,228, +,+, 318404 LTR ERVL 1716 chr2 148251131 148251544 CR1-L3B_Croc 480 + 148251131 148251544 0 2 340,56, 0,357, +,+, 318437 LINE CR1 1716 chr2 148277151 148277757 CR1-D2 667 - 148277151 148277757 0 2 368,238, 0,368, -,-, 318467 LINE CR1 1716 chr2 148284686 148285527 CR1-Y4 593 - 148284686 148285527 0 2 676,165, 0,676, -,-, 318476 LINE CR1 1716 chr2 148292357 148292638 CR1-F2 459 + 148292357 148292638 0 2 200,81, 0,200, +,+, 318481 LINE CR1 1716 chr2 148327799 148329718 CR1-D2 545 + 148327799 148329718 0 2 124,92, 0,1827, +,+, 318508 LINE CR1 1717 chr2 148433006 148433247 (CCCCT)n 448 + 148433006 148433247 0 2 76,59, 0,182, +,+, 318628 Simple_repeat Simple_repeat 1717 chr2 148436042 148438291 CR1-D2 415 - 148436042 148438291 0 2 11,140, 0,2109, -,-, 318634 LINE CR1 1717 chr2 148451625 148452357 CR1-Y4 568 + 148451625 148452357 0 2 451,75, 0,657, +,+, 318645 LINE CR1 1717 chr2 148458141 148459265 CR1-X2 618 + 148458141 148459265 0 2 184,58, 0,1066, +,+, 318655 LINE CR1 1717 chr2 148478931 148480768 CR1-Y2_Aves 441 - 148478931 148480768 0 3 1515,93,167, 0,1515,1670, -,-,-, 318670 LINE CR1 1717 chr2 148496140 148497277 CR1-D2 688 + 148496140 148497277 0 2 101,144, 0,993, +,+, 318685 LINE CR1 1718 chr2 148509661 148512439 CR1-F2 419 - 148509661 148512439 0 2 98,186, 0,2592, -,-, 318697 LINE CR1 1718 chr2 148527313 148527752 CR1-C4 459 - 148527313 148527752 0 2 344,95, 0,344, -,-, 318716 LINE CR1 1718 chr2 148528003 148528354 CR1-Y1_Aves 553 + 148528003 148528354 0 2 81,99, 0,252, +,+, 318717 LINE CR1 1718 chr2 148585567 148586028 CR1-Y1_Aves 295 - 148585567 148586028 0 2 150,259, 0,202, -,-, 318759 LINE CR1 1718 chr2 148606077 148606223 CR1-D2 765 - 148606077 148606223 0 2 84,62, 0,84, -,-, 318779 LINE CR1 1719 chr2 148641577 148641853 CR1-F2 445 - 148641577 148641853 0 2 89,187, 0,89, -,-, 318818 LINE CR1 1719 chr2 148662551 148664022 CR1-L3A_Croc 175 - 148662551 148664022 0 4 76,237,437,228, 0,76,441,1243, -,-,-,-, 318841 LINE CR1 1719 chr2 148682682 148683205 CR1-X2 208 - 148682682 148683205 0 2 338,40, 0,483, -,-, 318864 LINE CR1 1719 chr2 148700340 148701218 CR1-F2 407 + 148700340 148701218 0 2 212,303, 0,575, +,+, 318897 LINE CR1 1719 chr2 148747036 148747196 CR1-Y4 635 - 148747036 148747196 0 2 72,88, 0,72, -,-, 318946 LINE CR1 1719 chr2 148763424 148763646 CR1-F2 455 - 148763424 148763646 0 2 160,62, 0,160, -,-, 318966 LINE CR1 1720 chr2 148792651 148795568 CR1-F2 507 + 148792651 148795568 0 2 23,101, 0,2816, +,+, 319000 LINE CR1 1720 chr2 148799296 148800246 CR1-X2 519 + 148799296 148800246 0 2 41,726, 0,224, +,+, 319009 LINE CR1 1720 chr2 148809758 148809923 CR1-X1 740 + 148809758 148809923 0 2 54,62, 0,103, +,+, 319022 LINE CR1 1720 chr2 148810830 148811051 CR1-C3 670 + 148810830 148811051 0 2 63,95, 0,126, +,+, 319024 LINE CR1 1720 chr2 148819494 148819941 CR1-C4 655 - 148819494 148819941 0 2 46,274, 0,173, -,-, 319032 LINE CR1 1720 chr2 148823725 148824474 CR1-H2 613 - 148823725 148824474 0 2 178,571, 0,178, -,-, 319037 LINE CR1 1720 chr2 148834001 148834589 CR1-D2 594 - 148834001 148834589 0 3 202,51,333, 0,202,255, -,-,-, 319050 LINE CR1 1720 chr2 148845177 148846505 Char12Mar1_GG 314 - 148845177 148846505 0 2 1074,229, 0,1099, -,-, 319063 DNA hAT-Charlie 1720 chr2 148846556 148849392 CR1-F2 463 + 148846556 148849392 0 2 60,77, 0,2759, +,+, 319066 LINE CR1 1720 chr2 148850960 148854506 CR1-F 524 + 148850960 148854506 0 2 56,76, 0,3470, +,+, 319071 LINE CR1 1720 chr2 148854673 148857486 CR1-F2 488 - 148854673 148857486 0 2 107,185, 0,2628, -,-, 319074 LINE CR1 1720 chr2 148866197 148868937 CR1-X2 632 + 148866197 148868937 0 2 61,198, 0,2542, +,+, 319088 LINE CR1 1720 chr2 148868432 148868586 CR1-F2 537 + 148868432 148868586 0 2 74,70, 0,84, +,+, 319090 LINE CR1 1720 chr2 148868941 148870317 CR1-X2 590 + 148868941 148870317 0 2 133,95, 0,1281, +,+, 319091 LINE CR1 1720 chr2 148879219 148881600 CR1-F2 427 - 148879219 148881600 0 2 168,116, 0,2265, -,-, 319101 LINE CR1 1721 chr2 148900140 148900402 CR1-C4 463 - 148900140 148900402 0 3 50,52,126, 0,50,136, -,-,-, 319119 LINE CR1 1721 chr2 148909607 148910028 CR1-C4 676 + 148909607 148910028 0 2 252,60, 0,361, +,+, 319129 LINE CR1 1721 chr2 148913969 148916595 CR1-H2 491 + 148913969 148916595 0 2 120,81, 0,2545, +,+, 319135 LINE CR1 1721 chr2 148919951 148920119 CR1-F2 496 - 148919951 148920119 0 2 79,89, 0,79, -,-, 319142 LINE CR1 1721 chr2 148928814 148929525 CR1-B2 755 + 148928814 148929525 0 2 210,220, 0,491, +,+, 319153 LINE CR1 1721 chr2 148939928 148940314 CR1-Y1_Aves 502 + 148939928 148940314 0 2 173,75, 0,311, +,+, 319160 LINE CR1 1721 chr2 148942943 148945886 CR1-B 924 - 148942943 148945886 0 2 2782,156, 0,2787, -,-, 319164 LINE CR1 1721 chr2 148971138 148971397 CR1-F2 345 - 148971138 148971397 0 2 80,114, 0,145, -,-, 319182 LINE CR1 1721 chr2 148974410 148976053 CR1-F2 517 - 148974410 148976053 0 2 100,96, 0,1547, -,-, 319186 LINE CR1 1721 chr2 148976043 148976200 CR1-F2 417 - 148976043 148976200 0 2 77,80, 0,77, -,-, 319188 LINE CR1 1721 chr2 148990533 148991407 CR1-C 719 + 148990533 148991407 0 2 703,160, 0,714, +,+, 319195 LINE CR1 1721 chr2 149022827 149025720 CR1-F2 381 - 149022827 149025720 0 2 144,206, 0,2687, -,-, 319214 LINE CR1 1722 chr2 149030479 149031860 CR1-Y2_Aves 199 + 149030479 149031860 0 2 218,873, 0,508, +,+, 319222 LINE CR1 1722 chr2 149036974 149042990 CR1-Y2_Aves 343 + 149036974 149042990 0 3 62,155,877, 0,504,5139, +,+,+, 319226 LINE CR1 1722 chr2 149049981 149051608 CR1-X2 427 + 149049981 149051608 0 2 740,138, 0,1489, +,+, 319237 LINE CR1 1722 chr2 149067037 149068436 CR1-Y2_Aves 205 - 149067037 149068436 0 2 882,241, 0,1158, -,-, 319248 LINE CR1 1722 chr2 149083227 149084722 CR1-X2 400 - 149083227 149084722 0 2 161,609, 0,886, -,-, 319260 LINE CR1 1722 chr2 149086542 149087943 CR1-Y2_Aves 199 - 149086542 149087943 0 2 884,241, 0,1160, -,-, 319263 LINE CR1 1722 chr2 149094037 149096474 CR1-F 548 - 149094037 149096474 0 2 833,308, 0,2129, -,-, 319268 LINE CR1 1722 chr2 149104308 149105913 CR1-X2 462 - 149104308 149105913 0 2 140,717, 0,888, -,-, 319275 LINE CR1 1722 chr2 149107593 149109007 CR1-Y2_Aves 188 - 149107593 149109007 0 2 950,254, 0,1160, -,-, 319277 LINE CR1 1722 chr2 149118408 149119810 CR1-Y2_Aves 209 - 149118408 149119810 0 2 885,241, 0,1161, -,-, 319284 LINE CR1 1722 chr2 149142304 149143982 CR1-F 538 - 149142304 149143982 0 2 1301,55, 0,1623, -,-, 319301 LINE CR1 1722 chr2 149145945 149147340 CR1-Y2_Aves 207 - 149145945 149147340 0 2 878,241, 0,1154, -,-, 319304 LINE CR1 1722 chr2 149149660 149151048 CR1-Y2_Aves 189 - 149149660 149151048 0 2 937,241, 0,1147, -,-, 319307 LINE CR1 1722 chr2 149154056 149155600 GGLTR7A 667 + 149154056 149155600 0 2 273,354, 0,1190, +,+, 319309 LTR ERV1 1722 chr2 149156402 149156666 CR1-Y1_Aves 479 + 149156402 149156666 0 2 187,57, 0,207, +,+, 319313 LINE CR1 1723 chr2 149162643 149162727 (T)n 856 + 149162643 149162727 0 2 30,43, 0,41, +,+, 319323 Simple_repeat Simple_repeat 1723 chr2 149173474 149173642 CR1-F2 444 - 149173474 149173642 0 2 77,91, 0,77, -,-, 319338 LINE CR1 1723 chr2 149182593 149182687 CR1-C4 601 - 149182593 149182687 0 2 53,41, 0,53, -,-, 319350 LINE CR1 1723 chr2 149189515 149189664 CR1-C4 545 - 149189515 149189664 0 2 55,68, 0,81, -,-, 319360 LINE CR1 1723 chr2 149200864 149201198 CR1-H2 455 - 149200864 149201198 0 2 78,95, 0,239, -,-, 319382 LINE CR1 1723 chr2 149205884 149206186 CR1-C4 536 - 149205884 149206186 0 2 48,63, 0,239, -,-, 319389 LINE CR1 1723 chr2 149210774 149211058 CR1-C4 556 + 149210774 149211058 0 3 55,115,54, 0,55,230, +,+,+, 319392 LINE CR1 1723 chr2 149216938 149217252 CR1-F2 501 + 149216938 149217252 0 2 99,62, 0,252, +,+, 319400 LINE CR1 1723 chr2 149222331 149222777 (CATCC)n 696 + 149222331 149222777 0 2 226,220, 0,226, +,+, 319407 Simple_repeat Simple_repeat 1723 chr2 149236822 149237173 (CATTC)n 363 + 149236822 149237173 0 2 78,226, 0,125, +,+, 319423 Satellite Satellite 1723 chr2 149237393 149245142 Z-REP 628 + 149237393 149245142 0 2 518,7201, 0,548, +,+, 319425 Satellite macro 1723 chr2 149251023 149251823 CR1-C4 472 - 149251023 149251823 0 2 96,704, 0,96, -,-, 319429 LINE CR1 1723 chr2 149266899 149267983 CR1-Y3 551 + 149266899 149267983 0 2 733,136, 0,948, +,+, 319444 LINE CR1 1723 chr2 149274367 149275128 CR1-X2 439 + 149274367 149275128 0 2 102,281, 0,480, +,+, 319457 LINE CR1 1723 chr2 149276722 149277196 CR1-E 346 + 149276722 149277196 0 2 165,264, 0,210, +,+, 319460 LINE CR1 1723 chr2 149278439 149279135 CR1-C 813 - 149278439 149279135 0 2 264,432, 0,264, -,-, 319463 LINE CR1 1723 chr2 149282285 149282656 CR1-X1 539 - 149282285 149282656 0 2 298,72, 0,299, -,-, 319468 LINE CR1 1723 chr2 149284918 149285637 CR1-C2 772 + 149284918 149285637 0 2 117,304, 0,415, +,+, 319470 LINE CR1 1724 chr2 149301232 149303914 CR1-C 726 + 149301232 149303914 0 2 189,197, 0,2485, +,+, 319484 LINE CR1 1724 chr2 149305718 149309290 CR1-C2 744 + 149305718 149309290 0 2 197,178, 0,3394, +,+, 319492 LINE CR1 1724 chr2 149306807 149307169 CR1-C2 760 - 149306807 149307169 0 2 157,205, 0,157, -,-, 319494 LINE CR1 1724 chr2 149310534 149310937 CR1-X2 534 - 149310534 149310937 0 2 168,220, 0,183, -,-, 319496 LINE CR1 1724 chr2 149321999 149322459 CR1-C2 770 + 149321999 149322459 0 2 212,248, 0,212, +,+, 319516 LINE CR1 1724 chr2 149331820 149332437 CR1-C2 759 - 149331820 149332437 0 2 271,346, 0,271, -,-, 319527 LINE CR1 1724 chr2 149333949 149335106 CR1-Y4 661 - 149333949 149335106 0 2 115,1042, 0,115, -,-, 319529 LINE CR1 1724 chr2 149346474 149347362 CR1-C 796 + 149346474 149347362 0 2 641,247, 0,641, +,+, 319542 LINE CR1 1724 chr2 149352887 149354108 CR1-F 305 + 149352887 149354108 0 2 15,257, 0,964, +,+, 319548 LINE CR1 1724 chr2 149354111 149356948 CR1-B2 783 - 149354111 149356948 0 2 229,308, 0,2529, -,-, 319552 LINE CR1 1724 chr2 149373695 149374612 CR1-Y3 777 + 149373695 149374612 0 2 53,38, 0,879, +,+, 319572 LINE CR1 1724 chr2 149376549 149377483 CR1-D 342 + 149376549 149377483 0 2 188,177, 0,757, +,+, 319576 LINE CR1 1724 chr2 149392946 149393850 CR1-F2 414 + 149392946 149393850 0 2 99,458, 0,446, +,+, 319597 LINE CR1 1724 chr2 149401096 149401158 (GCACAAC)n 430 + 149401096 149401158 0 2 13,13, 0,49, +,+, 319607 Simple_repeat Simple_repeat 1724 chr2 149420800 149421744 CR1-F2 434 - 149420800 149421744 0 2 303,641, 0,303, -,-, 319622 LINE CR1 1725 chr2 149425742 149426541 CR1-Y1_Aves 231 + 149425742 149426541 0 2 464,335, 0,464, +,+, 319630 LINE CR1 1725 chr2 149441652 149442864 CR1-F2 513 - 149441652 149442864 0 2 107,531, 0,681, -,-, 319648 LINE CR1 1725 chr2 149477575 149477816 CR1-F2 282 - 149477575 149477816 0 2 61,140, 0,101, -,-, 319685 LINE CR1 1725 chr2 149480919 149483477 CR1-F2 418 - 149480919 149483477 0 2 109,193, 0,2365, -,-, 319690 LINE CR1 1725 chr2 149484463 149487392 CR1-F2 585 - 149484463 149487392 0 2 69,58, 0,2871, -,-, 319694 LINE CR1 1725 chr2 149489169 149489439 CR1-F2 226 - 149489169 149489439 0 3 29,64,123, 0,83,147, -,-,-, 319703 LINE CR1 1725 chr2 149495269 149495677 (CACAG)n 524 + 149495269 149495677 0 2 196,190, 0,218, +,+, 319710 Simple_repeat Simple_repeat 1725 chr2 149495767 149496327 (CACAG)n 467 + 149495767 149496327 0 2 341,202, 0,358, +,+, 319712 Simple_repeat Simple_repeat 1725 chr2 149500342 149500924 CR1-C 754 + 149500342 149500924 0 2 94,454, 0,128, +,+, 319722 LINE CR1 1725 chr2 149501297 149503832 CR1-B2 678 - 149501297 149503832 0 2 139,90, 0,2445, -,-, 319724 LINE CR1 1725 chr2 149550166 149550674 (CACAG)n 630 + 149550166 149550674 0 2 229,99, 0,409, +,+, 319768 Simple_repeat Simple_repeat 215 chr2 149552304 149554438 (CCCCAA)n 628 + 149552304 149554438 0 3 177,177,1754, 0,190,380, +,+,+, 319776 Simple_repeat Simple_repeat 1726 chr2 149555195 149556223 (GCATG)n 595 + 149555195 149556223 0 4 167,36,398,195, 0,399,435,833, +,+,+,+, 319781 Simple_repeat Simple_repeat 585 chr20 2791 9036 GGXHOI 384 - 2791 9036 0 5 1065,1787,431,1267,1518, 0,1086,2935,3398,4727, -,-,-,-,-, 319802 Satellite W-chromosome 585 chr20 9075 11413 GGXHOI 442 - 9075 11413 0 3 187,1841,227, 0,249,2111, -,-,-, 319804 Satellite W-chromosome 585 chr20 12205 12576 (CGAGG)n 722 + 12205 12576 0 2 153,30, 0,341, +,+, 319806 Simple_repeat Simple_repeat 585 chr20 12624 13926 GGXHOI 438 - 12624 13926 0 2 1138,150, 0,1152, -,-, 319808 Satellite W-chromosome 585 chr20 43449 43884 (GCCTG)n 514 + 43449 43884 0 2 187,60, 0,375, +,+, 319826 Simple_repeat Simple_repeat 585 chr20 44519 45080 (CCTTG)n 564 + 44519 45080 0 2 219,157, 0,404, +,+, 319832 Simple_repeat Simple_repeat 585 chr20 60069 61665 CR1-C4 349 + 60069 61665 0 2 467,188, 0,1408, +,+, 319843 LINE CR1 585 chr20 60537 61471 CR1-Y 295 + 60537 61471 0 2 210,81, 0,853, +,+, 319844 LINE CR1 585 chr20 93717 95911 GGLTR5A 248 - 93717 95911 0 2 182,350, 0,1844, -,-, 319863 LTR ERVL 585 chr20 93869 95541 Char12Mar1_GG 572 - 93869 95541 0 2 406,97, 0,1575, -,-, 319864 DNA hAT-Charlie 585 chr20 94275 95444 GGLTR3G1 292 + 94275 95444 0 2 120,477, 0,692, +,+, 319865 LTR ERVL 585 chr20 96288 99452 GGERVL-B-int 289 + 96288 99452 0 2 98,606, 0,2558, +,+, 319867 LTR ERVL 585 chr20 97722 98840 CR1-C4 616 - 97722 98840 0 2 759,359, 0,759, -,-, 319870 LINE CR1 585 chr20 101875 104142 CR1-D2 662 + 101875 104142 0 2 495,301, 0,1966, +,+, 319875 LINE CR1 585 chr20 128553 128838 CR1-Y3 787 + 128553 128838 0 2 68,214, 0,71, +,+, 319898 LINE CR1 73 chr20 130978 132742 CR1-C3 665 + 130978 132742 0 2 1371,393, 0,1371, +,+, 319900 LINE CR1 586 chr20 141849 144544 CR1-X1 563 - 141849 144544 0 3 992,87,424, 0,2184,2271, -,-,-, 319905 LINE CR1 586 chr20 153382 154488 CR1-Y2_Aves 353 - 153382 154488 0 2 388,689, 0,417, -,-, 319911 LINE CR1 586 chr20 174390 176038 CR1-F 411 - 174390 176038 0 3 1401,70,177, 0,1401,1471, -,-,-, 319924 LINE CR1 587 chr20 273913 275088 GGLTR8A 530 + 273913 275088 0 2 869,134, 0,1041, +,+, 319952 LTR ERVL 587 chr20 353069 355691 CR1-D 598 + 353069 355691 0 2 535,1703, 0,919, +,+, 319981 LINE CR1 587 chr20 359678 359884 CR1-D 185 - 359678 359884 0 2 22,145, 0,61, -,-, 319985 LINE CR1 587 chr20 366903 367488 CR1-F2 484 + 366903 367488 0 2 74,509, 0,76, +,+, 319989 LINE CR1 588 chr20 460926 461333 CR1-X 319 + 460926 461333 0 2 325,82, 0,325, +,+, 320026 LINE CR1 589 chr20 553939 556515 CR1-C4 610 - 553939 556515 0 2 421,2124, 0,452, -,-, 320075 LINE CR1 589 chr20 604155 604520 REP131 251 - 604155 604520 0 2 144,101, 0,264, -,-, 320100 DNA? DNA? 589 chr20 604717 606116 CR1-X 262 + 604717 606116 0 2 454,893, 0,506, +,+, 320101 LINE CR1 589 chr20 631586 631930 CR1-C2 360 - 631586 631930 0 2 176,168, 0,176, -,-, 320114 LINE CR1 589 chr20 649761 650207 CR1-X2 132 + 649761 650207 0 2 11,240, 0,206, +,+, 320123 LINE CR1 591 chr20 874760 876285 CR1-C4 468 - 874760 876285 0 2 88,796, 0,729, -,-, 320210 LINE CR1 591 chr20 908309 915894 CR1-C4 511 + 908309 915894 0 3 650,49,637, 0,726,6948, +,+,+, 320218 LINE CR1 592 chr20 964246 964303 (CTTTTCT)n 488 + 964246 964303 0 2 9,7, 0,50, +,+, 320232 Simple_repeat Simple_repeat 592 chr20 968368 968887 CR1-C4 507 + 968368 968887 0 2 372,147, 0,372, +,+, 320235 LINE CR1 592 chr20 971383 974981 GGERV28_LTR 699 - 971383 974981 0 3 3062,213,283, 0,3063,3315, -,-,-, 320241 LTR ERVK 592 chr20 995069 998110 CR1-E 632 - 995069 998110 0 2 371,359, 0,2682, -,-, 320248 LINE CR1 593 chr20 1078076 1078383 CR1-H 742 - 1078076 1078383 0 2 51,223, 0,84, -,-, 320285 LINE CR1 594 chr20 1227933 1228036 A-rich 570 + 1227933 1228036 0 2 38,40, 0,63, +,+, 320367 Low_complexity Low_complexity 594 chr20 1273174 1273543 GGLTR8B 450 + 1273174 1273543 0 2 100,269, 0,100, +,+, 320393 LTR ERVL 595 chr20 1315514 1316112 CR1-X1 605 + 1315514 1316112 0 2 348,244, 0,354, +,+, 320416 LINE CR1 595 chr20 1326768 1327481 GGLTR8B 346 - 1326768 1327481 0 2 465,248, 0,465, -,-, 320423 LTR ERVL 595 chr20 1362068 1362915 CR1-D 520 - 1362068 1362915 0 2 221,625, 0,222, -,-, 320439 LINE CR1 595 chr20 1375798 1376165 CR1-F2 515 + 1375798 1376165 0 3 14,33,156, 0,178,211, +,+,+, 320444 LINE CR1 595 chr20 1392354 1392796 CR1-Y2_Aves 442 - 1392354 1392796 0 2 101,242, 0,200, -,-, 320449 LINE CR1 595 chr20 1409523 1409905 TguLTR5e 378 + 1409523 1409905 0 2 210,145, 0,237, +,+, 320458 LTR ERVL 595 chr20 1429786 1430333 CR1-F2 386 + 1429786 1430333 0 2 172,375, 0,172, +,+, 320470 LINE CR1 596 chr20 1464051 1464884 CR1-H2 854 - 1464051 1464884 0 2 127,706, 0,127, -,-, 320494 LINE CR1 596 chr20 1471639 1471750 (GCCCC)n 330 + 1471639 1471750 0 2 10,46, 0,65, +,+, 320500 Simple_repeat Simple_repeat 596 chr20 1472754 1473588 CR1-H2 843 - 1472754 1473588 0 2 126,708, 0,126, -,-, 320504 LINE CR1 596 chr20 1480455 1480560 (GCCCCGC)n 380 + 1480455 1480560 0 2 8,50, 0,55, +,+, 320510 Simple_repeat Simple_repeat 596 chr20 1481561 1482394 CR1-H2 854 - 1481561 1482394 0 2 127,706, 0,127, -,-, 320514 LINE CR1 596 chr20 1490283 1491116 CR1-H2 854 - 1490283 1491116 0 2 127,706, 0,127, -,-, 320523 LINE CR1 596 chr20 1497889 1497996 (GCCCCGA)n 382 + 1497889 1497996 0 2 8,51, 0,56, +,+, 320529 Simple_repeat Simple_repeat 596 chr20 1498998 1499831 CR1-H2 857 - 1498998 1499831 0 2 127,706, 0,127, -,-, 320533 LINE CR1 596 chr20 1505486 1506315 CR1-H2 755 - 1505486 1506315 0 2 122,707, 0,122, -,-, 320540 LINE CR1 596 chr20 1514202 1515030 CR1-H2 863 - 1514202 1515030 0 2 120,708, 0,120, -,-, 320550 LINE CR1 596 chr20 1565348 1567002 CR1-C2 539 + 1565348 1567002 0 3 494,52,150, 0,1233,1504, +,+,+, 320579 LINE CR1 597 chr20 1573734 1574575 Mariner1b_GG 690 - 1573734 1574575 0 2 298,44, 0,797, -,-, 320587 DNA TcMar-Mariner 597 chr20 1625813 1627570 CR1-X 173 + 1625813 1627570 0 2 888,417, 0,1340, +,+, 320621 LINE CR1 597 chr20 1639077 1639128 A-rich 530 + 1639077 1639128 0 2 12,16, 0,35, +,+, 320631 Low_complexity Low_complexity 597 chr20 1669075 1669604 CR1-Y1_Aves 482 + 1669075 1669604 0 2 397,119, 0,410, +,+, 320649 LINE CR1 598 chr20 1710343 1710776 CR1-C4 666 + 1710343 1710776 0 2 346,75, 0,358, +,+, 320682 LINE CR1 598 chr20 1716412 1717929 CR1-G 795 - 1716412 1717929 0 2 240,1277, 0,240, -,-, 320687 LINE CR1 598 chr20 1748084 1748575 Char12Mar1_GG 559 - 1748084 1748575 0 3 80,177,54, 0,88,437, -,-,-, 320703 DNA hAT-Charlie 598 chr20 1751378 1751569 CR1-F2 338 + 1751378 1751569 0 2 79,70, 0,121, +,+, 320706 LINE CR1 598 chr20 1780423 1781414 ENS1B-LTR 542 + 1780423 1781414 0 2 128,459, 0,532, +,+, 320728 LTR ERVL 598 chr20 1787242 1787870 CR1-L3A_Croc 288 + 1787242 1787870 0 2 226,66, 0,562, +,+, 320732 LINE CR1 598 chr20 1817641 1817980 CR1-E 824 + 1817641 1817980 0 2 181,155, 0,184, +,+, 320754 LINE CR1 598 chr20 1827771 1827992 CR1-X1 571 - 1827771 1827992 0 2 148,73, 0,148, -,-, 320757 LINE CR1 598 chr20 1832709 1833102 CR1-Y1_Aves 324 - 1832709 1833102 0 2 164,217, 0,176, -,-, 320758 LINE CR1 599 chr20 1919576 1919778 CR1-Y3 768 - 1919576 1919778 0 2 148,54, 0,148, -,-, 320795 LINE CR1 599 chr20 1957122 1957216 (TTTA)n 306 + 1957122 1957216 0 2 25,26, 0,68, +,+, 320823 Simple_repeat Simple_repeat 600 chr20 2008598 2012350 CR1-F2 384 + 2008598 2012350 0 2 113,202, 0,3550, +,+, 320855 LINE CR1 600 chr20 2071872 2075316 GGLTR10C2 891 - 2071872 2075316 0 3 360,2723,361, 0,360,3083, -,-,-, 320889 LTR ERVK 601 chr20 2107612 2110185 CR1-X2 512 + 2107612 2110185 0 4 87,301,1145,157, 0,961,1271,2416, +,+,+,+, 320904 LINE CR1 601 chr20 2154398 2154869 CR1-X1 548 - 2154398 2154869 0 2 176,293, 0,178, -,-, 320918 LINE CR1 601 chr20 2156838 2157139 CR1-C3 568 - 2156838 2157139 0 2 85,113, 0,188, -,-, 320919 LINE CR1 601 chr20 2193996 2194055 GA-rich 332 + 2193996 2194055 0 2 22,13, 0,46, +,+, 320949 Low_complexity Low_complexity 601 chr20 2210048 2211630 CR1-C2 293 - 2210048 2211630 0 2 130,1434, 0,148, -,-, 320956 LINE CR1 602 chr20 2242690 2242759 (GCTGC)n 392 + 2242690 2242759 0 2 38,6, 0,63, +,+, 320970 Simple_repeat Simple_repeat 602 chr20 2329905 2335957 CR1-X1 391 - 2329905 2335957 0 4 150,532,286,170, 0,223,771,5882, -,-,-,-, 321005 LINE CR1 603 chr20 2359412 2359783 (TCTA)n 622 + 2359412 2359783 0 2 179,180, 0,191, +,+, 321028 Simple_repeat Simple_repeat 604 chr20 2518472 2519020 CR1-8_Crp 350 + 2518472 2519020 0 2 390,158, 0,390, +,+, 321132 LINE CR1 604 chr20 2577766 2577941 CR1-H2 441 + 2577766 2577941 0 2 117,58, 0,117, +,+, 321181 LINE CR1 605 chr20 2731488 2731687 GGLTR5B 706 - 2731488 2731687 0 2 58,141, 0,58, -,-, 321234 LTR ERVL 606 chr20 2782902 2783481 GGLTR8B 531 + 2782902 2783481 0 3 65,399,115, 0,65,464, +,+,+, 321247 LTR ERVL 606 chr20 2819726 2820213 CR1-X2 612 - 2819726 2820213 0 2 117,370, 0,117, -,-, 321260 LINE CR1 606 chr20 2858598 2858719 CR1-X2 724 - 2858598 2858719 0 2 34,87, 0,34, -,-, 321271 LINE CR1 607 chr20 2955114 2957387 CR1-L3B_Croc 273 - 2955114 2957387 0 2 252,200, 0,2073, -,-, 321321 LINE CR1 607 chr20 2975578 2976377 CR1-C3 393 - 2975578 2976377 0 2 579,179, 0,620, -,-, 321329 LINE CR1 607 chr20 2985048 2985401 CR1-Y2_Aves 415 - 2985048 2985401 0 2 168,173, 0,180, -,-, 321334 LINE CR1 608 chr20 3110421 3112813 Char12Mar1_GG 499 - 3110421 3112813 0 2 351,108, 0,2284, -,-, 321381 DNA hAT-Charlie 608 chr20 3111853 3112695 CR1-X 481 + 3111853 3112695 0 2 128,714, 0,128, +,+, 321383 LINE CR1 608 chr20 3118258 3120152 CR1-F2 539 - 3118258 3120152 0 2 1013,881, 0,1013, -,-, 321386 LINE CR1 609 chr20 3201963 3202408 CR1-Y3 695 + 3201963 3202408 0 2 77,181, 0,264, +,+, 321409 LINE CR1 609 chr20 3237425 3239083 CR1-X 502 + 3237425 3239083 0 4 317,261,264,177, 0,341,621,1481, +,+,+,+, 321426 LINE CR1 609 chr20 3253149 3253788 CR1-X1 569 + 3253149 3253788 0 3 416,125,98, 0,416,541, +,+,+, 321432 LINE CR1 609 chr20 3270577 3270940 GGLTR5A 424 + 3270577 3270940 0 2 236,112, 0,251, +,+, 321443 LTR ERVL 612 chr20 3636540 3638033 CR1-C4 498 + 3636540 3638033 0 2 75,316, 0,1177, +,+, 321604 LINE CR1 612 chr20 3641415 3642901 CR1-C4 487 + 3641415 3642901 0 2 75,312, 0,1174, +,+, 321607 LINE CR1 613 chr20 3676422 3677838 CR1-C4 483 + 3676422 3677838 0 2 75,307, 0,1109, +,+, 321610 LINE CR1 613 chr20 3681212 3682705 CR1-C4 508 + 3681212 3682705 0 2 75,316, 0,1177, +,+, 321613 LINE CR1 615 chr20 3967818 3967909 (GGCGGCG)n 424 + 3967818 3967909 0 2 10,29, 0,62, +,+, 321736 Simple_repeat Simple_repeat 615 chr20 4026247 4031999 GGERV10_LTR 982 + 4026247 4031999 0 3 221,5310,220, 0,222,5532, +,+,+, 321759 LTR ERVL 616 chr20 4112602 4119335 CR1-C4 490 - 4112602 4119335 0 3 75,75,75, 0,3329,6658, -,-,-, 321799 LINE CR1 616 chr20 4174226 4174522 CR1-X2 667 + 4174226 4174522 0 2 156,99, 0,197, +,+, 321829 LINE CR1 616 chr20 4191194 4191844 CR1-X2 408 + 4191194 4191844 0 2 552,97, 0,553, +,+, 321836 LINE CR1 617 chr20 4224648 4226087 CR1-C4 357 - 4224648 4226087 0 2 262,75, 0,1364, -,-, 321849 LINE CR1 617 chr20 4229443 4230882 CR1-C4 449 - 4229443 4230882 0 2 262,75, 0,1364, -,-, 321852 LINE CR1 617 chr20 4234236 4235675 CR1-C4 343 - 4234236 4235675 0 2 262,75, 0,1364, -,-, 321855 LINE CR1 618 chr20 4413347 4414840 CR1-C4 508 + 4413347 4414840 0 2 75,316, 0,1177, +,+, 321940 LINE CR1 618 chr20 4418748 4420224 CR1-C4 443 + 4418748 4420224 0 2 76,300, 0,1176, +,+, 321944 LINE CR1 618 chr20 4420784 4421060 GGLTR3A 679 + 4420784 4421060 0 2 154,58, 0,218, +,+, 321945 LTR ERVL 619 chr20 4461711 4462100 UCON64 164 - 4461711 4462100 0 2 121,126, 0,263, -,-, 321961 Unknown Unknown 619 chr20 4470618 4471737 CR1-F2 426 - 4470618 4471737 0 2 376,743, 0,376, -,-, 321968 LINE CR1 622 chr20 4950404 4953504 CR1-F2 374 + 4950404 4953504 0 2 321,86, 0,3014, +,+, 322269 LINE CR1 625 chr20 5369623 5371613 CR1-C3 445 + 5369623 5371613 0 2 356,167, 0,1823, +,+, 322432 LINE CR1 626 chr20 5403440 5404334 Char12Mar1_GG 641 - 5403440 5404334 0 2 497,367, 0,527, -,-, 322445 DNA hAT-Charlie 78 chr20 5635594 5636204 CR1-Y2 567 + 5635594 5636204 0 2 144,466, 0,144, +,+, 322513 LINE CR1 628 chr20 5680810 5681183 CR1-C 652 + 5680810 5681183 0 2 189,184, 0,189, +,+, 322542 LINE CR1 628 chr20 5720669 5724441 CR1-F2 360 + 5720669 5724441 0 2 328,273, 0,3499, +,+, 322567 LINE CR1 629 chr20 5821831 5825389 CR1-Y2 540 + 5821831 5825389 0 2 492,74, 0,3484, +,+, 322617 LINE CR1 79 chr20 6552607 6553861 CR1-B 904 - 6552607 6553861 0 2 895,359, 0,895, -,-, 322889 LINE CR1 635 chr20 6604096 6604621 TguLTR5e 418 - 6604096 6604621 0 2 123,306, 0,219, -,-, 322902 LTR ERVL 637 chr20 6840505 6841191 CR1-Y2 249 - 6840505 6841191 0 2 464,137, 0,549, -,-, 322994 LINE CR1 639 chr20 7117431 7117506 (ATGT)n 364 + 7117431 7117506 0 2 24,20, 0,55, +,+, 323103 Simple_repeat Simple_repeat 639 chr20 7133390 7133735 Mariner1b_GG 483 - 7133390 7133735 0 2 283,62, 0,283, -,-, 323110 DNA TcMar-Mariner 640 chr20 7262766 7262861 (T)n 661 + 7262766 7262861 0 2 24,35, 0,60, +,+, 323165 Simple_repeat Simple_repeat 644 chr20 7802165 7802503 CR1-8_Crp 226 - 7802165 7802503 0 2 125,213, 0,125, -,-, 323409 LINE CR1 646 chr20 8049748 8049807 (CCTC)n 384 + 8049748 8049807 0 2 9,23, 0,36, +,+, 323505 Simple_repeat Simple_repeat 648 chr20 8348468 8350563 CR1-L3A_Croc 307 + 8348468 8350563 0 3 323,370,322, 0,1150,1773, +,+,+, 323660 LINE CR1 81 chr20 8650601 8650872 CR1-F2 497 - 8650601 8650872 0 2 200,51, 0,220, -,-, 323765 LINE CR1 651 chr20 8763560 8763795 (TA)n 412 + 8763560 8763795 0 2 16,43, 0,192, +,+, 323819 Simple_repeat Simple_repeat 654 chr20 9106223 9106317 (TTCTC)n 164 + 9106223 9106317 0 2 7,6, 0,88, +,+, 323971 Simple_repeat Simple_repeat 655 chr20 9202891 9203037 (GAATG)n 705 + 9202891 9203037 0 2 41,92, 0,54, +,+, 324032 Simple_repeat Simple_repeat 656 chr20 9306906 9307863 CR1-F2 257 + 9306906 9307863 0 2 234,368, 0,589, +,+, 324082 LINE CR1 657 chr20 9476695 9477468 CR1-L3B_Croc 314 - 9476695 9477468 0 2 255,78, 0,695, -,-, 324184 LINE CR1 657 chr20 9503860 9503986 CR1-H 402 - 9503860 9503986 0 2 58,25, 0,101, -,-, 324192 LINE CR1 658 chr20 9578013 9578147 CR1-E 388 + 9578013 9578147 0 2 46,38, 0,96, +,+, 324226 LINE CR1 658 chr20 9695345 9695693 CR1-X1 454 + 9695345 9695693 0 2 84,140, 0,208, +,+, 324295 LINE CR1 659 chr20 9745113 9752997 CR1-X1 583 - 9745113 9752997 0 2 61,300, 0,7584, -,-, 324323 LINE CR1 659 chr20 9803575 9803836 CR1-Y4 691 - 9803575 9803836 0 2 47,180, 0,81, -,-, 324353 LINE CR1 659 chr20 9809078 9809220 G-rich 553 + 9809078 9809220 0 2 58,31, 0,111, +,+, 324359 Low_complexity Low_complexity 664 chr20 10481592 10482645 Char12Mar1_GG 421 - 10481592 10482645 0 2 58,920, 0,133, -,-, 324731 DNA hAT-Charlie 665 chr20 10494511 10495046 CR1-L3A_Croc 123 + 10494511 10495046 0 2 182,350, 0,185, +,+, 324735 LINE CR1 665 chr20 10496404 10496520 CR1-Y4 649 + 10496404 10496520 0 2 58,58, 0,58, +,+, 324738 LINE CR1 665 chr20 10496516 10496627 CR1-Y2 617 + 10496516 10496627 0 2 60,51, 0,60, +,+, 324739 LINE CR1 665 chr20 10585721 10585982 CR1-X1 484 + 10585721 10585982 0 2 174,56, 0,205, +,+, 324760 LINE CR1 666 chr20 10641150 10641219 (TCCTGCTC)n 400 + 10641150 10641219 0 2 6,32, 0,37, +,+, 324775 Simple_repeat Simple_repeat 667 chr20 10789185 10789248 (TGCGC)n 342 + 10789185 10789248 0 2 11,11, 0,52, +,+, 324852 Simple_repeat Simple_repeat 667 chr20 10818192 10819263 CR1-L3A_Croc 119 - 10818192 10819263 0 2 258,208, 0,863, -,-, 324860 LINE CR1 669 chr20 11014981 11015231 CR1-X2 315 + 11014981 11015231 0 2 105,61, 0,189, +,+, 324942 LINE CR1 669 chr20 11065400 11065925 CR1-Y4 609 + 11065400 11065925 0 2 198,327, 0,198, +,+, 324954 LINE CR1 669 chr20 11097982 11098028 (TTC)n 438 + 11097982 11098028 0 2 6,6, 0,40, +,+, 324966 Simple_repeat Simple_repeat 671 chr20 11383793 11385162 CR1-L3B_Croc 169 - 11383793 11385162 0 3 346,98,439, 0,454,930, -,-,-, 325064 LINE CR1 675 chr20 11855059 11855123 (GCCCCCA)n 434 + 11855059 11855123 0 2 8,13, 0,51, +,+, 325255 Simple_repeat Simple_repeat 676 chr20 11964493 11964655 CR1-D2 613 + 11964493 11964655 0 2 98,64, 0,98, +,+, 325293 LINE CR1 679 chr20 12414167 12414234 (CT)n 354 + 12414167 12414234 0 2 36,6, 0,61, +,+, 325439 Simple_repeat Simple_repeat 680 chr20 12465478 12465745 GGLTR3C2 326 + 12465478 12465745 0 2 94,131, 0,136, +,+, 325448 LTR ERVL 680 chr20 12551434 12552096 CR1-C2 676 - 12551434 12552096 0 2 493,169, 0,493, -,-, 325467 LINE CR1 681 chr20 12647807 12653368 CR1-C2 490 + 12647807 12653368 0 2 89,113, 0,5448, +,+, 325490 LINE CR1 682 chr20 12713987 12714057 (A)n 875 + 12713987 12714057 0 2 23,26, 0,44, +,+, 325515 Simple_repeat Simple_repeat 684 chr20 13059817 13060194 CR1-D2 639 - 13059817 13060194 0 2 77,300, 0,77, -,-, 325664 LINE CR1 686 chr20 13249505 13249566 A-rich 322 + 13249505 13249566 0 2 12,21, 0,40, +,+, 325726 Low_complexity Low_complexity 687 chr20 13397376 13397437 (GCCCG)n 346 + 13397376 13397437 0 2 21,10, 0,51, +,+, 325789 Simple_repeat Simple_repeat 691 chr20 13926693 13926743 (GCCCCCG)n 344 + 13926693 13926743 0 2 8,9, 0,41, +,+, 325974 Simple_repeat Simple_repeat 692 chr20 14073410 14073758 TguLTR5d 196 - 14073410 14073758 0 2 154,169, 0,179, -,-, 326042 LTR ERVL 585 chr20_NT_462795v1_random 16765 18807 CR1-B2 592 - 16765 18807 0 2 133,194, 0,1848, -,-, 326073 LINE CR1 585 chr20_NT_462795v1_random 53560 54164 CR1-Y4 531 - 53560 54164 0 2 75,529, 0,75, -,-, 326101 LINE CR1 585 chr20_NT_462796v1_random 1064 6124 CR1-G 642 + 1064 6124 0 3 266,1378,1964, 0,331,3096, +,+,+, 326117 LINE CR1 585 chr20_NT_462796v1_random 6122 12773 GGERVL-A-int 595 - 6122 12773 0 3 1036,204,116, 0,5751,6535, -,-,-, 326119 LTR ERVL 585 chr20_NT_462796v1_random 13310 28940 GGLTR7-int 349 - 13310 28940 0 6 112,258,1105,509,1082,56, 0,1029,2855,13562,14300,15574, -,-,-,-,-,-, 326123 LTR ERV1 585 chr20_NT_462796v1_random 17345 25751 GGERVL18-int 739 + 17345 25751 0 4 341,512,4782,345, 0,349,3279,8061, +,+,+,+, 326126 LTR ERVL 585 chr20_NT_462796v1_random 30088 35094 GGLTR7A 840 - 30088 35094 0 2 581,4425, 0,581, -,-, 326129 LTR ERV1 585 chr20_NT_462799v1_random 12509 13496 CR1-E 806 - 12509 13496 0 2 408,579, 0,408, -,-, 326169 LINE CR1 585 chr20_NT_462799v1_random 13489 14437 CR1-F 780 - 13489 14437 0 2 305,491, 0,457, -,-, 326170 LINE CR1 585 chr20_NT_462799v1_random 18237 18989 CR1-Y3 801 + 18237 18989 0 2 65,56, 0,696, +,+, 326172 LINE CR1 585 chr20_NT_462799v1_random 21247 24859 GGLTR7A 872 - 21247 24859 0 2 609,3003, 0,609, -,-, 326177 LTR ERV1 585 chr20_NT_462799v1_random 24860 27320 GGERVL-C-int 778 - 24860 27320 0 4 524,1336,257,343, 0,524,1860,2117, -,-,-,-, 326178 LTR ERVL 585 chr20_NT_462800v1_random 22368 22924 CR1-E 538 + 22368 22924 0 2 496,59, 0,497, +,+, 326192 LINE CR1 585 chr20_NT_462801v1_random 8095 8631 CR1-Y1_Aves 456 + 8095 8631 0 2 403,120, 0,416, +,+, 326200 LINE CR1 585 chr20_NT_462805v1_random 4463 6172 CR1-G 517 - 4463 6172 0 3 384,159,593, 0,701,1116, -,-,-, 326268 LINE CR1 585 chr20_NT_462806v1_random 2687 4180 CR1-C4 508 + 2687 4180 0 2 75,316, 0,1177, +,+, 326275 LINE CR1 585 chr20_NT_462806v1_random 8078 9571 CR1-C4 508 + 8078 9571 0 2 75,316, 0,1177, +,+, 326278 LINE CR1 585 chr20_NT_462808v1_random 218 1877 GGXHOI 398 - 218 1877 0 4 912,231,137,304, 0,928,1195,1355, -,-,-,-, 326295 Satellite W-chromosome 585 chr20_NT_462809v1_random 15457 17409 CR1-C 555 + 15457 17409 0 2 408,825, 0,1127, +,+, 326327 LINE CR1 585 chr20_NT_462810v1_random 5484 6064 CR1-E 535 + 5484 6064 0 2 520,60, 0,520, +,+, 326344 LINE CR1 585 chr20_NT_462811v1_random 2347 3840 CR1-C4 508 + 2347 3840 0 2 75,316, 0,1177, +,+, 326366 LINE CR1 585 chr20_NT_462813v1_random 4929 5761 CR1-H2 846 - 4929 5761 0 2 126,706, 0,126, -,-, 326400 LINE CR1 585 chr20_NT_462814v1_random 1032 1119 (GCC)n 370 + 1032 1119 0 2 18,18, 0,69, +,+, 326420 Simple_repeat Simple_repeat 585 chr20_NT_462814v1_random 4964 5568 CR1-Y4 529 - 4964 5568 0 2 75,529, 0,75, -,-, 326426 LINE CR1 585 chr20_NT_462814v1_random 8864 10961 CR1-B2 592 - 8864 10961 0 2 133,194, 0,1903, -,-, 326429 LINE CR1 585 chr20_NT_462816v1_random 14969 15583 CR1-Y4 516 + 14969 15583 0 2 554,60, 0,554, +,+, 326458 LINE CR1 585 chr20_NT_462817v1_random 9263 9820 CR1-E 538 - 9263 9820 0 2 59,497, 0,60, -,-, 326473 LINE CR1 585 chr20_NT_462817v1_random 13146 15235 CR1-B2 594 - 13146 15235 0 2 133,194, 0,1895, -,-, 326476 LINE CR1 585 chr20_NT_462820v1_random 3415 5976 CR1-Y4 545 + 3415 5976 0 2 544,295, 0,2266, +,+, 326523 LINE CR1 585 chr20_NT_462820v1_random 10096 10676 CR1-E 533 + 10096 10676 0 2 520,60, 0,520, +,+, 326537 LINE CR1 585 chr20_NT_462821v1_random 15330 15904 CR1-E 508 + 15330 15904 0 2 514,60, 0,514, +,+, 326566 LINE CR1 585 chr20_NT_462822v1_random 12867 14462 CR1-G 421 + 12867 14462 0 2 574,340, 0,1255, +,+, 326571 LINE CR1 585 chr20_NT_462826v1_random 4354 5187 CR1-H2 857 + 4354 5187 0 2 708,125, 0,708, +,+, 326610 LINE CR1 585 chr20_NT_462826v1_random 13062 13893 CR1-H2 853 + 13062 13893 0 2 706,125, 0,706, +,+, 326620 LINE CR1 585 chr20_NT_462827v1_random 3718 3767 (CCGAGCC)n 414 + 3718 3767 0 2 11,19, 0,30, +,+, 326629 Simple_repeat Simple_repeat 585 chr20_NT_462831v1_random 8323 8904 CR1-E 524 - 8323 8904 0 2 76,505, 0,76, -,-, 326700 LINE CR1 585 chr20_NT_462834v1_random 2638 4131 CR1-C4 498 - 2638 4131 0 2 316,75, 0,1418, -,-, 326741 LINE CR1 585 chr20_NT_462834v1_random 7515 9008 CR1-C4 498 - 7515 9008 0 2 316,75, 0,1418, -,-, 326743 LINE CR1 585 chr20_NT_462834v1_random 12390 13883 CR1-C4 485 - 12390 13883 0 2 316,75, 0,1418, -,-, 326745 LINE CR1 585 chr20_NT_462835v1_random 8009 9502 CR1-C4 508 + 8009 9502 0 2 75,316, 0,1177, +,+, 326749 LINE CR1 585 chr20_NT_462836v1_random 9448 11943 CR1-E 511 - 9448 11943 0 2 296,527, 0,1968, -,-, 326761 LINE CR1 585 chr20_NT_462838v1_random 7985 9474 CR1-C4 482 + 7985 9474 0 2 74,316, 0,1173, +,+, 326772 LINE CR1 585 chr20_NT_462840v1_random 2259 2815 CR1-E 490 - 2259 2815 0 2 75,481, 0,75, -,-, 326800 LINE CR1 585 chr20_NT_462840v1_random 8876 9432 CR1-E 492 - 8876 9432 0 2 75,481, 0,75, -,-, 326811 LINE CR1 585 chr20_NT_462841v1_random 4874 5454 CR1-E 537 - 4874 5454 0 2 75,505, 0,75, -,-, 326825 LINE CR1 585 chr20_NT_462842v1_random 2369 3862 CR1-C4 498 + 2369 3862 0 2 75,316, 0,1177, +,+, 326839 LINE CR1 585 chr20_NT_462842v1_random 7246 8737 CR1-C4 497 + 7246 8737 0 2 75,314, 0,1177, +,+, 326841 LINE CR1 585 chr20_NT_462844v1_random 4961 6463 CR1-C4 388 + 4961 6463 0 2 91,318, 0,1184, +,+, 326854 LINE CR1 585 chr20_NT_462845v1_random 3261 5205 CR1-C 544 + 3261 5205 0 2 407,822, 0,1122, +,+, 326865 LINE CR1 585 chr20_NT_462846v1_random 8517 9095 CR1-E 529 + 8517 9095 0 2 518,60, 0,518, +,+, 326881 LINE CR1 585 chr20_NT_462848v1_random 7667 8197 CR1-Y4 293 + 7667 8197 0 3 24,99,59, 0,360,471, +,+,+, 326899 LINE CR1 585 chr20_NT_462848v1_random 7691 8138 CR1-D2 382 + 7691 8138 0 2 336,75, 0,372, +,+, 326900 LINE CR1 585 chr20_NT_462849v1_random 7750 8525 CR1-H2 844 - 7750 8525 0 2 128,647, 0,128, -,-, 326908 LINE CR1 585 chr20_NT_462855v1_random 6724 9265 CR1-Y4 367 + 6724 9265 0 2 549,317, 0,2224, +,+, 326948 LINE CR1 585 chr20_NT_462856v1_random 5044 6142 CR1-H2 786 + 5044 6142 0 4 326,274,331,125, 0,331,642,973, +,+,+,+, 326951 LINE CR1 585 chr20_NT_462859v1_random 7346 7924 CR1-E 492 - 7346 7924 0 2 75,503, 0,75, -,-, 326976 LINE CR1 585 chr20_NT_462860v1_random 2530 3940 CR1-C4 496 + 2530 3940 0 2 76,294, 0,1116, +,+, 326981 LINE CR1 585 chr20_NT_462865v1_random 5372 5958 CR1-E 514 + 5372 5958 0 2 519,67, 0,519, +,+, 327007 LINE CR1 585 chr20_NT_462872v1_random 506 6091 GGERV10_LTR 834 + 506 6091 0 3 147,5205,222, 0,158,5363, +,+,+, 327023 LTR ERVL 585 chr20_NT_462872v1_random 6452 7604 CR1-H 664 + 6452 7604 0 2 1040,112, 0,1040, +,+, 327024 LINE CR1 585 chr20_NT_462877v1_random 2022 3533 CR1-C4 428 + 2022 3533 0 2 76,334, 0,1177, +,+, 327043 LINE CR1 585 chr20_NT_462879v1_random 3144 6571 CR1-C4 490 + 3144 6571 0 2 75,75, 0,3352, +,+, 327052 LINE CR1 585 chr20_NT_462889v1_random 2877 3073 CR1-X 521 + 2877 3073 0 2 33,140, 0,56, +,+, 327090 LINE CR1 585 chr20_NT_462894v1_random 3114 5410 CR1-Y4 543 - 3114 5410 0 2 295,363, 0,1933, -,-, 327118 LINE CR1 585 chr20_NT_462905v1_random 589 851 CR1-Y4 670 - 589 851 0 2 48,180, 0,82, -,-, 327142 LINE CR1 585 chr20_NT_462908v1_random 2542 4486 CR1-E 633 - 2542 4486 0 2 295,46, 0,1898, -,-, 327151 LINE CR1 585 chr20_NT_462920v1_random 1050 1608 (CCTTG)n 647 + 1050 1608 0 2 122,291, 0,267, +,+, 327171 Simple_repeat Simple_repeat 585 chr20_NT_462920v1_random 1633 2254 (CCTTG)n 590 + 1633 2254 0 3 187,181,207, 0,233,414, +,+,+, 327173 Simple_repeat Simple_repeat 585 chr20_NT_462920v1_random 2193 2554 (GCCTG)n 548 + 2193 2554 0 2 112,69, 0,292, +,+, 327174 Simple_repeat Simple_repeat 585 chr20_NT_462921v1_random 39 664 (CAAGG)n 649 + 39 664 0 3 177,57,186, 0,359,439, +,+,+, 327178 Simple_repeat Simple_repeat 585 chr20_NT_462921v1_random 705 2263 (CAAGG)n 660 + 705 2263 0 5 281,70,67,99,72, 0,464,713,1122,1486, +,+,+,+,+, 327181 Simple_repeat Simple_repeat 585 chr20_NT_462925v1_random 680 1257 (CCTTG)n 627 + 680 1257 0 2 186,371, 0,206, +,+, 327194 Simple_repeat Simple_repeat 585 chr20_NT_462925v1_random 1239 1732 (CCTTG)n 634 + 1239 1732 0 2 239,75, 0,418, +,+, 327196 Simple_repeat Simple_repeat 585 chr20_NT_462925v1_random 1761 2302 (CCTTG)n 626 + 1761 2302 0 2 274,77, 0,464, +,+, 327199 Simple_repeat Simple_repeat 585 chr20_NT_462947v1_random 1532 4457 GGLTR11 857 - 1532 4457 0 2 243,2682, 0,243, -,-, 327210 LTR ERV1 585 chr20_NT_462947v1_random 4457 5961 GGLTR7A 892 - 4457 5961 0 2 610,894, 0,610, -,-, 327211 LTR ERV1 585 chr20_NT_462948v1_random 2717 3040 GGERV10_LTR 678 - 2717 3040 0 2 159,62, 0,261, -,-, 327219 LTR ERVL 585 chr20_NT_462949v1_random 952 1275 GGERV10_LTR 589 - 952 1275 0 2 159,80, 0,243, -,-, 327229 LTR ERVL 585 chr21 1619 3205 GGXHOI 417 - 1619 3205 0 2 387,1184, 0,402, -,-, 327238 Satellite W-chromosome 585 chr21 32785 42235 UCON69 418 - 32785 42235 0 2 79,79, 0,9371, -,-, 327262 DNA hAT? 586 chr21 157128 159199 CR1-Y3 594 - 157128 159199 0 2 685,1039, 0,1032, -,-, 327369 LINE CR1 590 chr21 740945 743442 CR1-F2 446 - 740945 743442 0 2 78,145, 0,2352, -,-, 327623 LINE CR1 591 chr21 786832 787286 (TCTG)n 519 + 786832 787286 0 2 184,253, 0,201, +,+, 327639 Simple_repeat Simple_repeat 591 chr21 800933 801099 CR1-F2 437 + 800933 801099 0 2 80,80, 0,86, +,+, 327648 LINE CR1 592 chr21 1020375 1020420 (GCTGCC)n 484 + 1020375 1020420 0 2 11,15, 0,30, +,+, 327737 Simple_repeat Simple_repeat 593 chr21 1089816 1090129 (CTCTATGGGG)n 168 - 1089816 1090129 0 2 141,153, 0,160, -,-, 327769 Satellite Satellite 593 chr21 1112419 1116096 CR1-F2 368 - 1112419 1116096 0 2 197,204, 0,3473, -,-, 327780 LINE CR1 594 chr21 1212007 1212146 CR1-C4 649 - 1212007 1212146 0 3 53,37,49, 0,53,90, -,-,-, 327824 LINE CR1 601 chr21 2183261 2183356 CR1-Y4 317 - 2183261 2183356 0 2 19,55, 0,40, -,-, 328146 LINE CR1 605 chr21 2632272 2633033 CR1-Y3 314 - 2632272 2633033 0 2 97,664, 0,97, -,-, 328267 LINE CR1 605 chr21 2635922 2636167 CR1-C2 698 + 2635922 2636167 0 2 45,196, 0,49, +,+, 328269 LINE CR1 606 chr21 2817104 2819096 CR1-C4 555 + 2817104 2819096 0 2 11,109, 0,1883, +,+, 328383 LINE CR1 606 chr21 2878107 2878409 CR1-B2 521 + 2878107 2878409 0 2 95,207, 0,95, +,+, 328428 LINE CR1 607 chr21 2890353 2891328 CR1-D2 572 - 2890353 2891328 0 2 582,393, 0,582, -,-, 328430 LINE CR1 613 chr21 3698003 3698570 CR1-H2 551 + 3698003 3698570 0 2 61,135, 0,432, +,+, 328729 LINE CR1 614 chr21 3806741 3806845 GA-rich 228 + 3806741 3806845 0 2 45,25, 0,79, +,+, 328774 Low_complexity Low_complexity 614 chr21 3820099 3820137 (TTCTTT)n 484 + 3820099 3820137 0 2 7,12, 0,26, +,+, 328788 Simple_repeat Simple_repeat 614 chr21 3900557 3900650 GA-rich 548 + 3900557 3900650 0 2 43,38, 0,55, +,+, 328839 Low_complexity Low_complexity 617 chr21 4245962 4247053 CR1-F2 574 + 4245962 4247053 0 2 785,302, 0,789, +,+, 329010 LINE CR1 617 chr21 4280013 4280224 LFSINE_Vert 378 + 4280013 4280224 0 2 81,73, 0,138, +,+, 329022 SINE tRNA 618 chr21 4417426 4417666 CR1-F2 452 - 4417426 4417666 0 3 74,76,62, 0,82,178, -,-,-, 329101 LINE CR1 619 chr21 4579100 4579444 CR1-F2 447 + 4579100 4579444 0 2 165,152, 0,192, +,+, 329258 LINE CR1 620 chr21 4673785 4673878 CR1-C4 669 + 4673785 4673878 0 2 49,44, 0,49, +,+, 329300 LINE CR1 620 chr21 4673866 4673960 CR1-B2 672 + 4673866 4673960 0 2 59,35, 0,59, +,+, 329301 LINE CR1 620 chr21 4674010 4674100 CR1-C3 717 + 4674010 4674100 0 2 53,37, 0,53, +,+, 329303 LINE CR1 620 chr21 4674096 4674188 CR1-C4 689 + 4674096 4674188 0 2 49,43, 0,49, +,+, 329304 LINE CR1 620 chr21 4674238 4674376 CR1-C3 727 + 4674238 4674376 0 3 53,35,44, 0,53,94, +,+,+, 329306 LINE CR1 622 chr21 4859233 4859564 CR1-Y1_Aves 325 - 4859233 4859564 0 2 103,208, 0,123, -,-, 329366 LINE CR1 622 chr21 4971075 4971231 (CCATCT)n 365 + 4971075 4971231 0 2 68,51, 0,105, +,+, 329480 Simple_repeat Simple_repeat 622 chr21 4976512 4976557 (TACA)n 428 + 4976512 4976557 0 2 6,9, 0,36, +,+, 329486 Simple_repeat Simple_repeat 622 chr21 4978265 4979456 CR1-F2 449 - 4978265 4979456 0 4 196,102,90,102, 0,897,999,1089, -,-,-,-, 329491 LINE CR1 623 chr21 5000354 5000539 CR1-F2 530 + 5000354 5000539 0 2 94,67, 0,118, +,+, 329515 LINE CR1 623 chr21 5005081 5005489 CR1-C4 584 + 5005081 5005489 0 4 108,66,54,42, 0,226,312,366, +,+,+,+, 329522 LINE CR1 623 chr21 5008507 5008762 CR1-F0 453 - 5008507 5008762 0 2 103,130, 0,125, -,-, 329530 LINE CR1 623 chr21 5023287 5024937 CR1-F2 501 + 5023287 5024937 0 2 118,217, 0,1433, +,+, 329552 LINE CR1 623 chr21 5070966 5071377 CR1-X2 688 + 5070966 5071377 0 2 66,128, 0,283, +,+, 329603 LINE CR1 623 chr21 5097925 5099577 CR1-F2 404 - 5097925 5099577 0 2 65,215, 0,1437, -,-, 329627 LINE CR1 624 chr21 5112806 5114410 CR1-B2 476 - 5112806 5114410 0 2 200,158, 0,1446, -,-, 329646 LINE CR1 625 chr21 5254383 5254639 CR1-C4 663 - 5254383 5254639 0 2 67,187, 0,69, -,-, 329714 LINE CR1 626 chr21 5451422 5452452 CR1-C4 608 - 5451422 5452452 0 2 453,577, 0,453, -,-, 329839 LINE CR1 628 chr21 5677214 5679439 CR1-F2 508 - 5677214 5679439 0 3 259,96,63, 0,1200,2162, -,-,-, 329939 LINE CR1 628 chr21 5699879 5701510 CR1-D2 491 - 5699879 5701510 0 2 152,113, 0,1518, -,-, 329951 LINE CR1 628 chr21 5754227 5754285 (CCTCT)n 520 + 5754227 5754285 0 2 16,6, 0,52, +,+, 329977 Simple_repeat Simple_repeat 629 chr21 5818283 5818619 CR1-C4 573 + 5818283 5818619 0 2 103,90, 0,246, +,+, 330029 LINE CR1 629 chr21 5850657 5850803 CR1-F2 568 + 5850657 5850803 0 2 64,82, 0,64, +,+, 330054 LINE CR1 629 chr21 5851945 5852966 CR1-Y2 126 - 5851945 5852966 0 2 510,465, 0,556, -,-, 330055 LINE CR1 629 chr21 5859085 5859212 TguLTR5d 550 - 5859085 5859212 0 2 14,65, 0,62, -,-, 330063 LTR ERVL 629 chr21 5870065 5870418 CR1-X2 584 - 5870065 5870418 0 2 115,238, 0,115, -,-, 330077 LINE CR1 629 chr21 5883477 5883683 CR1-F2 731 + 5883477 5883683 0 2 99,107, 0,99, +,+, 330094 LINE CR1 629 chr21 5885494 5885829 CR1-X2 556 - 5885494 5885829 0 2 100,235, 0,100, -,-, 330097 LINE CR1 629 chr21 5889444 5890070 CR1-C2 276 + 5889444 5890070 0 2 16,291, 0,335, +,+, 330098 LINE CR1 629 chr21 5892060 5892233 CR1-H 789 + 5892060 5892233 0 2 66,107, 0,66, +,+, 330101 LINE CR1 78 chr21 5898006 5898738 CR1-C2 310 + 5898006 5898738 0 3 16,22,375, 0,335,357, +,+,+, 330108 LINE CR1 630 chr21 5900659 5900832 CR1-H 813 + 5900659 5900832 0 2 66,107, 0,66, +,+, 330111 LINE CR1 630 chr21 5910584 5912463 CR1-Y2_Aves 181 - 5910584 5912463 0 2 207,330, 0,1549, -,-, 330123 LINE CR1 630 chr21 5967714 5968521 CR1-C4 582 + 5967714 5968521 0 2 395,411, 0,396, +,+, 330178 LINE CR1 630 chr21 5995429 5995679 CR1-F2 581 - 5995429 5995679 0 3 95,77,74, 0,95,176, -,-,-, 330200 LINE CR1 630 chr21 6013105 6016785 CR1-X 521 - 6013105 6016785 0 2 217,189, 0,3491, -,-, 330212 LINE CR1 631 chr21 6048173 6050134 CR1-L3B_Croc 349 + 6048173 6050134 0 2 244,190, 0,1771, +,+, 330236 LINE CR1 631 chr21 6071284 6075616 CR1-F2 378 - 6071284 6075616 0 2 144,95, 0,4237, -,-, 330258 LINE CR1 631 chr21 6091575 6092662 CR1-X 312 + 6091575 6092662 0 2 988,88, 0,999, +,+, 330274 LINE CR1 631 chr21 6099105 6099740 Char12Mar1_GG 577 - 6099105 6099740 0 2 85,514, 0,121, -,-, 330280 DNA hAT-Charlie 78 chr21 6160323 6160794 CR1-L3B_Croc 363 + 6160323 6160794 0 2 39,220, 0,251, +,+, 330344 LINE CR1 632 chr21 6180681 6180928 (GCCCCACAGCT)n 320 + 6180681 6180928 0 2 67,127, 0,120, +,+, 330364 Satellite Satellite 632 chr21 6200336 6201303 CR1-11_Crp 265 - 6200336 6201303 0 3 418,102,177, 0,500,790, -,-,-, 330374 LINE CR1 632 chr21 6233199 6233298 CR1-C3 771 - 6233199 6233298 0 2 55,44, 0,55, -,-, 330398 LINE CR1 632 chr21 6261193 6261444 CR1-F0 543 + 6261193 6261444 0 2 152,99, 0,152, +,+, 330434 LINE CR1 633 chr21 6299102 6299652 CR1-Y2_Aves 302 - 6299102 6299652 0 2 211,204, 0,346, -,-, 330467 LINE CR1 633 chr21 6388083 6388312 CR1-D2 467 + 6388083 6388312 0 2 72,157, 0,72, +,+, 330516 LINE CR1 633 chr21 6398297 6398342 (GCTTTTT)n 446 + 6398297 6398342 0 2 9,12, 0,33, +,+, 330521 Simple_repeat Simple_repeat 633 chr21 6401704 6403457 CR1-D2 349 + 6401704 6403457 0 2 51,158, 0,1595, +,+, 330525 LINE CR1 633 chr21 6414406 6414479 (GGCG)n 336 + 6414406 6414479 0 2 31,6, 0,67, +,+, 330539 Simple_repeat Simple_repeat 634 chr21 6429598 6430017 CR1-X 392 - 6429598 6430017 0 2 265,153, 0,266, -,-, 330547 LINE CR1 635 chr21 6670088 6671565 CR1-F 409 - 6670088 6671565 0 2 1119,352, 0,1125, -,-, 330722 LINE CR1 635 chr21 6679983 6682900 CR1-Y 442 + 6679983 6682900 0 2 704,1659, 0,1258, +,+, 330728 LINE CR1 636 chr21 6715874 6716631 CR1-F2 462 - 6715874 6716631 0 2 441,309, 0,448, -,-, 330749 LINE CR1 637 chr21 6824852 6825191 (CAGGC)n 472 + 6824852 6825191 0 2 124,56, 0,283, +,+, 330801 Simple_repeat Simple_repeat 637 chr21 6825392 6826149 (CAAGG)n 706 + 6825392 6826149 0 2 179,567, 0,190, +,+, 330805 Simple_repeat Simple_repeat 637 chr21 6826165 6827832 (CAAGG)n 661 + 6826165 6827832 0 5 191,692,194,175,180, 0,370,1062,1291,1487, +,+,+,+,+, 330807 Simple_repeat Simple_repeat 637 chr21 6827932 6829574 (CAAGG)n 626 + 6827932 6829574 0 4 269,100,311,236, 0,449,564,1406, +,+,+,+, 330810 Simple_repeat Simple_repeat 637 chr21 6831163 6831853 (CCTTG)n 500 + 6831163 6831853 0 2 263,244, 0,446, +,+, 330815 Simple_repeat Simple_repeat 637 chr21 6831633 6832128 (CCTCG)n 602 + 6831633 6832128 0 2 234,80, 0,415, +,+, 330817 Simple_repeat Simple_repeat 637 chr21 6833083 6834077 GGXHOI 377 + 6833083 6834077 0 2 387,548, 0,446, +,+, 330820 Satellite W-chromosome 637 chr21 6834159 6841579 GGXHOI 387 + 6834159 6841579 0 9 1043,275,938,139,291,623,964,809,2122, 0,1101,1395,2351,2511,2845,3488,4467,5298, +,+,+,+,+,+,+,+,+, 330821 Satellite W-chromosome 637 chr21 6843950 6846071 GGXHOI 416 + 6843950 6846071 0 2 334,1730, 0,391, +,+, 330823 Satellite W-chromosome 637 chr21 6846156 6848236 GGXHOI 418 + 6846156 6848236 0 2 334,1689, 0,391, +,+, 330824 Satellite W-chromosome 637 chr21 6848357 6852621 GGXHOI 416 + 6848357 6852621 0 4 1385,709,333,1722, 0,1403,2152,2542, +,+,+,+, 330825 Satellite W-chromosome 637 chr21 6852706 6854827 GGXHOI 419 + 6852706 6854827 0 2 334,1730, 0,391, +,+, 330826 Satellite W-chromosome 637 chr21 6854912 6860740 GGXHOI 410 + 6854912 6860740 0 3 334,3179,2201, 0,391,3627, +,+,+, 330827 Satellite W-chromosome 637 chr21 6860872 6862157 GGXHOI 317 + 6860872 6862157 0 2 1092,130, 0,1155, +,+, 330828 Satellite W-chromosome 585 chr21_NT_462953v1_random 50 152 CR1-C4 734 - 50 152 0 2 57,45, 0,57, -,-, 330845 LINE CR1 585 chr21_NT_462970v1_random 5234 5529 CR1-F2 525 + 5234 5529 0 3 103,101,91, 0,103,204, +,+,+, 330914 LINE CR1 585 chr21_NT_462979v1_random 884 1808 (CGAGG)n 603 + 884 1808 0 3 248,39,256, 0,629,668, +,+,+, 330932 Simple_repeat Simple_repeat 585 chr21_NT_462979v1_random 3987 4887 (CCTTG)n 609 + 3987 4887 0 3 144,36,523, 0,326,377, +,+,+, 330941 Simple_repeat Simple_repeat 585 chr21_NT_462983v1_random 858 3629 CR1-F2 431 + 858 3629 0 2 90,62, 0,2709, +,+, 330958 LINE CR1 585 chr21_NT_462983v1_random 2168 2264 CR1-C4 655 - 2168 2264 0 2 47,49, 0,47, -,-, 330959 LINE CR1 585 chr21_NT_462983v1_random 2284 2514 CR1-C4 659 - 2284 2514 0 2 65,48, 0,182, -,-, 330961 LINE CR1 585 chr21_NT_462983v1_random 2498 2661 CR1-C4 452 - 2498 2661 0 2 62,101, 0,62, -,-, 330965 LINE CR1 585 chr21_NT_462996v1_random 847 1693 (CCTTG)n 622 + 847 1693 0 2 236,418, 0,428, +,+, 330996 Simple_repeat Simple_repeat 585 chr22 3283 6440 GGERV10_LTR 944 + 3283 6440 0 2 2937,220, 0,2937, +,+, 331007 LTR ERVL 585 chr22 33030 33604 GGLTR5B 560 + 33030 33604 0 2 359,187, 0,387, +,+, 331041 LTR ERVL 585 chr22 120865 122853 CR1-X2 575 - 120865 122853 0 2 114,179, 0,1809, -,-, 331074 LINE CR1 586 chr22 146857 149812 CR1-F2 524 - 146857 149812 0 2 72,204, 0,2751, -,-, 331086 LINE CR1 586 chr22 160333 160492 CR1-X1 623 - 160333 160492 0 2 50,60, 0,99, -,-, 331103 LINE CR1 586 chr22 172019 173100 CR1-H2 385 + 172019 173100 0 2 94,74, 0,1007, +,+, 331115 LINE CR1 586 chr22 251236 251697 CR1-C4 405 + 251236 251697 0 3 203,158,68, 0,203,393, +,+,+, 331166 LINE CR1 586 chr22 253409 253575 CR1-F2 531 - 253409 253575 0 2 99,67, 0,99, -,-, 331167 LINE CR1 586 chr22 254529 259708 CR1-F2 397 - 254529 259708 0 3 123,98,90, 0,4991,5089, -,-,-, 331168 LINE CR1 586 chr22 257088 257536 CR1-C4 690 + 257088 257536 0 2 157,289, 0,159, +,+, 331170 LINE CR1 587 chr22 265616 267876 CR1-F2 348 + 265616 267876 0 2 139,258, 0,2002, +,+, 331174 LINE CR1 587 chr22 281766 282032 CR1-C4 563 - 281766 282032 0 2 55,177, 0,89, -,-, 331185 LINE CR1 587 chr22 389224 390446 CR1-X2 132 - 389224 390446 0 2 524,689, 0,533, -,-, 331250 LINE CR1 588 chr22 397494 398314 CR1-F2 337 + 397494 398314 0 2 302,332, 0,488, +,+, 331253 LINE CR1 588 chr22 434029 434182 CR1-F2 655 + 434029 434182 0 2 73,72, 0,81, +,+, 331275 LINE CR1 588 chr22 434383 434548 CR1-F2 404 + 434383 434548 0 2 87,78, 0,87, +,+, 331278 LINE CR1 588 chr22 457443 458360 CR1-F2 374 + 457443 458360 0 2 92,480, 0,437, +,+, 331303 LINE CR1 589 chr22 573003 573207 CR1-C 747 - 573003 573207 0 2 65,139, 0,65, -,-, 331369 LINE CR1 590 chr22 749789 751323 X2_LINE 355 - 749789 751323 0 2 184,220, 0,1314, -,-, 331463 LINE CR1 591 chr22 865192 865273 (TTTGT)n 516 + 865192 865273 0 2 25,23, 0,58, +,+, 331512 Simple_repeat Simple_repeat 591 chr22 915933 916049 (A)n 872 + 915933 916049 0 2 30,23, 0,93, +,+, 331527 Simple_repeat Simple_repeat 592 chr22 997347 998964 CR1-F 327 + 997347 998964 0 2 113,144, 0,1473, +,+, 331559 LINE CR1 592 chr22 1041331 1043264 CR1-F2 425 - 1041331 1043264 0 2 118,259, 0,1674, -,-, 331567 LINE CR1 593 chr22 1052449 1053120 CR1-F2 358 + 1052449 1053120 0 2 82,150, 0,521, +,+, 331572 LINE CR1 593 chr22 1058437 1061703 CR1-F0 526 - 1058437 1061703 0 2 80,80, 0,3186, -,-, 331574 LINE CR1 593 chr22 1064671 1065742 CR1-F2 459 - 1064671 1065742 0 2 77,150, 0,921, -,-, 331579 LINE CR1 593 chr22 1084778 1085498 CR1-X2 456 + 1084778 1085498 0 2 102,173, 0,547, +,+, 331600 LINE CR1 593 chr22 1092395 1092657 CR1-F2 439 - 1092395 1092657 0 3 95,72,94, 0,95,168, -,-,-, 331609 LINE CR1 593 chr22 1111990 1112544 CR1-C2 615 - 1111990 1112544 0 2 11,177, 0,377, -,-, 331620 LINE CR1 593 chr22 1134103 1134446 CR1-D2 690 - 1134103 1134446 0 2 53,43, 0,300, -,-, 331637 LINE CR1 593 chr22 1138989 1139128 CR1-F2 509 - 1138989 1139128 0 2 70,65, 0,74, -,-, 331640 LINE CR1 593 chr22 1152181 1153966 CR1-B2 673 + 1152181 1153966 0 3 64,55,44, 0,1686,1741, +,+,+, 331657 LINE CR1 74 chr22 1178787 1181314 CR1-F2 435 - 1178787 1181314 0 2 158,90, 0,2437, -,-, 331684 LINE CR1 594 chr22 1226685 1226818 CR1-F2 552 + 1226685 1226818 0 2 58,66, 0,67, +,+, 331709 LINE CR1 594 chr22 1230621 1230750 CR1-F2 528 - 1230621 1230750 0 2 70,59, 0,70, -,-, 331714 LINE CR1 594 chr22 1237540 1237688 CR1-F2 514 + 1237540 1237688 0 2 73,75, 0,73, +,+, 331719 LINE CR1 594 chr22 1243420 1243646 CR1-C4 656 - 1243420 1243646 0 4 53,49,43,45, 0,89,138,181, -,-,-,-, 331725 LINE CR1 594 chr22 1294726 1294779 (CTC)n 474 + 1294726 1294779 0 2 6,18, 0,35, +,+, 331761 Simple_repeat Simple_repeat 595 chr22 1317225 1317490 (ACCCATAGGG)n 319 + 1317225 1317490 0 2 103,106, 0,159, +,+, 331770 Satellite Satellite 595 chr22 1360352 1360416 (CCGTC)n 344 + 1360352 1360416 0 2 14,22, 0,42, +,+, 331803 Simple_repeat Simple_repeat 595 chr22 1412023 1412400 (CAATG)n 372 + 1412023 1412400 0 2 197,164, 0,213, +,+, 331829 Simple_repeat Simple_repeat 597 chr22 1614299 1614714 CR1-D2 530 + 1614299 1614714 0 2 280,35, 0,380, +,+, 331955 LINE CR1 597 chr22 1641449 1641559 (TA)n 775 + 1641449 1641559 0 2 53,37, 0,73, +,+, 331973 Simple_repeat Simple_repeat 601 chr22 2169112 2169160 (TACA)n 528 + 2169112 2169160 0 2 15,11, 0,37, +,+, 332148 Simple_repeat Simple_repeat 606 chr22 2858787 2858938 (CTTTC)n 370 + 2858787 2858938 0 2 64,45, 0,106, +,+, 332475 Simple_repeat Simple_repeat 606 chr22 2879457 2879549 (C)n 944 + 2879457 2879549 0 2 18,19, 0,73, +,+, 332495 Simple_repeat Simple_repeat 607 chr22 2889785 2889827 (CTTTT)n 616 + 2889785 2889827 0 2 6,13, 0,29, +,+, 332505 Simple_repeat Simple_repeat 607 chr22 2957887 2958270 CR1-F2 434 - 2957887 2958270 0 2 280,103, 0,280, -,-, 332555 LINE CR1 607 chr22 2963702 2966578 CR1-F2 398 - 2963702 2966578 0 2 76,108, 0,2768, -,-, 332556 LINE CR1 611 chr22 3507723 3508437 (ACCCATAGGG)n 447 - 3507723 3508437 0 3 121,380,92, 0,121,622, -,-,-, 332577 Satellite Satellite 611 chr22 3522468 3522537 (G)n 862 + 3522468 3522537 0 2 19,26, 0,43, +,+, 332584 Simple_repeat Simple_repeat 611 chr22 3536075 3536610 (CTGTG)n 293 + 3536075 3536610 0 2 254,260, 0,275, +,+, 332598 Simple_repeat Simple_repeat 611 chr22 3536676 3537752 (CTGTG)n 323 + 3536676 3537752 0 2 728,288, 0,788, +,+, 332599 Simple_repeat Simple_repeat 611 chr22 3538549 3538934 (CATGC)n 399 + 3538549 3538934 0 2 179,174, 0,211, +,+, 332601 Simple_repeat Simple_repeat 612 chr22 3543509 3543544 (CCCCGT)n 546 + 3543509 3543544 0 2 6,8, 0,27, +,+, 332603 Simple_repeat Simple_repeat 612 chr22 3552771 3552882 CR1-B 638 + 3552771 3552882 0 2 60,51, 0,60, +,+, 332618 LINE CR1 612 chr22 3565815 3565929 (T)n 750 + 3565815 3565929 0 2 35,44, 0,70, +,+, 332638 Simple_repeat Simple_repeat 612 chr22 3578609 3579725 CR1-X2 416 + 3578609 3579725 0 3 148,130,586, 0,316,530, +,+,+, 332649 LINE CR1 612 chr22 3585584 3586062 (CACTG)n 358 + 3585584 3586062 0 2 226,214, 0,264, +,+, 332654 Simple_repeat Simple_repeat 612 chr22 3587235 3588211 CR1-Y4 459 - 3587235 3588211 0 2 325,211, 0,765, -,-, 332655 LINE CR1 612 chr22 3589731 3590669 (CTGTG)n 413 + 3589731 3590669 0 3 256,120,194, 0,611,744, +,+,+, 332659 Simple_repeat Simple_repeat 612 chr22 3591193 3592243 (CTGTG)n 411 + 3591193 3592243 0 4 200,398,47,64, 0,220,783,986, +,+,+,+, 332665 Simple_repeat Simple_repeat 612 chr22 3614199 3614509 (ACCCATTGGG)n 353 + 3614199 3614509 0 2 138,132, 0,178, +,+, 332679 Satellite Satellite 613 chr22 3707739 3708451 CR1-F2 476 - 3707739 3708451 0 2 357,94, 0,618, -,-, 332754 LINE CR1 613 chr22 3772896 3773814 CR1-C3 574 + 3772896 3773814 0 2 431,487, 0,431, +,+, 332792 LINE CR1 614 chr22 3802335 3803023 CR1-F2 537 + 3802335 3803023 0 2 245,443, 0,245, +,+, 332800 LINE CR1 614 chr22 3903758 3904374 CR1-Y2_Aves 305 + 3903758 3904374 0 2 272,110, 0,506, +,+, 332857 LINE CR1 614 chr22 3930189 3930491 Penelope1_Vert 352 + 3930189 3930491 0 2 120,162, 0,140, +,+, 332878 LINE Penelope 615 chr22 3953837 3954298 CR1-F2 695 + 3953837 3954298 0 2 58,41, 0,420, +,+, 332889 LINE CR1 615 chr22 4053878 4053975 G-rich 630 + 4053878 4053975 0 2 30,37, 0,60, +,+, 332943 Low_complexity Low_complexity 619 chr22 4474492 4480023 CR1-F2 579 + 4474492 4480023 0 3 320,97,76, 0,4498,5455, +,+,+, 333152 LINE CR1 619 chr22 4566591 4567821 CR1-C3 510 + 4566591 4567821 0 2 96,142, 0,1088, +,+, 333208 LINE CR1 619 chr22 4573853 4575090 CR1-C3 490 + 4573853 4575090 0 2 96,142, 0,1095, +,+, 333216 LINE CR1 619 chr22 4578052 4579289 CR1-C3 490 + 4578052 4579289 0 2 96,142, 0,1095, +,+, 333220 LINE CR1 620 chr22 4610791 4611237 CR1-C4 646 - 4610791 4611237 0 2 140,251, 0,195, -,-, 333248 LINE CR1 620 chr22 4651308 4651643 (GCATG)n 243 + 4651308 4651643 0 2 159,150, 0,185, +,+, 333278 Simple_repeat Simple_repeat 620 chr22 4651707 4652247 (GCATG)n 200 + 4651707 4652247 0 2 317,199, 0,341, +,+, 333279 Simple_repeat Simple_repeat 620 chr22 4655487 4656076 (GGATG)n 745 + 4655487 4656076 0 2 187,377, 0,212, +,+, 333287 Simple_repeat Simple_repeat 620 chr22 4687260 4688028 (TTAGGG)n 567 + 4687260 4688028 0 2 185,549, 0,219, +,+, 333310 Simple_repeat Simple_repeat 620 chr22 4707866 4708458 (CCCTAA)n 607 + 4707866 4708458 0 2 367,187, 0,405, +,+, 333340 Simple_repeat Simple_repeat 620 chr22 4708646 4710414 (CCCTAA)n 646 + 4708646 4710414 0 7 184,178,185,194,61,213,328, 0,198,394,592,938,1186,1440, +,+,+,+,+,+,+, 333342 Simple_repeat Simple_repeat 621 chr22 4721292 4722220 (TTAGGG)n 542 + 4721292 4722220 0 3 206,183,489, 0,242,439, +,+,+, 333351 Simple_repeat Simple_repeat 621 chr22 4728727 4729222 (CATTG)n 606 + 4728727 4729222 0 2 285,210, 0,285, +,+, 333364 Simple_repeat Simple_repeat 585 chr22_NT_463004v1_random 6803 11908 GGXHOI 366 + 6803 11908 0 7 877,224,262,796,2029,528,229, 0,896,1151,1441,2287,4336,4876, +,+,+,+,+,+,+, 333423 Satellite W-chromosome 585 chr22_NT_463004v1_random 12057 14491 GGXHOI 395 + 12057 14491 0 2 881,1532, 0,902, +,+, 333425 Satellite W-chromosome 585 chr22_NT_463006v1_random 8639 11247 (TTAGGG)n 660 + 8639 11247 0 7 377,606,187,78,185,185,771, 0,377,983,1355,1446,1644,1837, +,+,+,+,+,+,+, 333469 Simple_repeat Simple_repeat 585 chr22_NT_463006v1_random 22224 22976 G-rich 246 + 22224 22976 0 2 619,53, 0,699, +,+, 333483 Low_complexity Low_complexity 585 chr22_NT_463008v1_random 1447 1507 (GGAGGAT)n 382 + 1447 1507 0 2 11,14, 0,46, +,+, 333503 Simple_repeat Simple_repeat 585 chr22_NT_463008v1_random 5853 6688 CR1-C2 554 - 5853 6688 0 2 112,66, 0,769, -,-, 333528 LINE CR1 585 chr22_NT_463008v1_random 6276 6626 CR1-C 572 - 6276 6626 0 2 175,175, 0,175, -,-, 333532 LINE CR1 585 chr22_NT_463009v1_random 15255 15369 (A)n 902 + 15255 15369 0 2 29,22, 0,92, +,+, 333546 Simple_repeat Simple_repeat 585 chr22_NT_463010v1_random 4563 7700 GGERV10_LTR 840 - 4563 7700 0 2 206,2931, 0,206, -,-, 333555 LTR ERVL 585 chr22_NT_463010v1_random 11615 13739 GGXHOI 340 + 11615 13739 0 2 1601,506, 0,1618, +,+, 333559 Satellite W-chromosome 585 chr22_NT_463010v1_random 14509 18632 GGXHOI 344 + 14509 18632 0 5 1705,833,662,514,344, 0,1722,2570,3249,3779, +,+,+,+,+, 333561 Satellite W-chromosome 585 chr22_NT_463011v1_random 2375 3714 GGXHOI 411 + 2375 3714 0 3 841,312,147, 0,858,1192, +,+,+, 333563 Satellite W-chromosome 585 chr22_NT_463011v1_random 4227 8019 GGXHOI 429 + 4227 8019 0 4 846,1149,348,1352, 0,861,2071,2440, +,+,+,+, 333565 Satellite W-chromosome 585 chr22_NT_463011v1_random 8144 13371 GGXHOI 415 + 8144 13371 0 6 286,606,1769,887,860,731, 0,307,930,2716,3619,4496, +,+,+,+,+,+, 333566 Satellite W-chromosome 585 chr22_NT_463011v1_random 13494 18303 GGXHOI 383 + 13494 18303 0 5 286,2390,850,799,417, 0,307,2714,3578,4392, +,+,+,+,+, 333567 Satellite W-chromosome 585 chr22_NT_463013v1_random 5260 8441 GGERV10_LTR 954 + 5260 8441 0 2 2962,219, 0,2962, +,+, 333582 LTR ERVL 585 chr22_NT_463014v1_random 2597 3075 (CACTG)n 358 + 2597 3075 0 2 226,214, 0,264, +,+, 333595 Simple_repeat Simple_repeat 585 chr22_NT_463014v1_random 4248 5224 CR1-Y4 459 - 4248 5224 0 2 325,211, 0,765, -,-, 333596 LINE CR1 585 chr22_NT_463014v1_random 7738 9264 (CTGTG)n 417 + 7738 9264 0 5 293,369,384,213,65, 0,306,695,1092,1461, +,+,+,+,+, 333604 Simple_repeat Simple_repeat 585 chr22_NT_463015v1_random 6635 9829 GGERV10_LTR 896 - 6635 9829 0 2 222,2972, 0,222, -,-, 333611 LTR ERVL 585 chr22_NT_463016v1_random 8179 11363 GGERV10_LTR 951 + 8179 11363 0 2 2962,220, 0,2964, +,+, 333618 LTR ERVL 585 chr22_NT_463020v1_random 3477 3725 CR1-F2 487 - 3477 3725 0 3 61,80,94, 0,73,154, -,-,-, 333652 LINE CR1 585 chr22_NT_463024v1_random 3134 6061 GGERV10_LTR 925 - 3134 6061 0 2 207,2720, 0,207, -,-, 333667 LTR ERVL 585 chr22_NT_463025v1_random 1883 2611 (CATCC)n 788 + 1883 2611 0 2 509,186, 0,542, +,+, 333670 Simple_repeat Simple_repeat 585 chr22_NT_463025v1_random 3406 3946 (CATGC)n 200 + 3406 3946 0 2 199,317, 0,223, +,+, 333672 Simple_repeat Simple_repeat 585 chr22_NT_463025v1_random 4010 4345 (CATGC)n 243 + 4010 4345 0 2 150,159, 0,176, +,+, 333673 Simple_repeat Simple_repeat 585 chr22_NT_463026v1_random 1843 5025 GGERV10_LTR 946 - 1843 5025 0 2 219,2963, 0,219, -,-, 333682 LTR ERVL 585 chr22_NT_463028v1_random 2678 5836 GGERV10_LTR 863 - 2678 5836 0 2 216,2939, 0,219, -,-, 333691 LTR ERVL 585 chr22_NT_463033v1_random 1542 5059 GGERV20_I-int 883 - 1542 5059 0 3 227,2027,933, 0,233,2584, -,-,-, 333724 LTR ERVL 585 chr22_NT_463036v1_random 5696 5870 CR1-Y1_Aves 420 - 5696 5870 0 2 87,71, 0,103, -,-, 333738 LINE CR1 585 chr22_NT_463037v1_random 338 3504 GGERV10_LTR 929 - 338 3504 0 2 221,2941, 0,225, -,-, 333741 LTR ERVL 585 chr22_NT_463039v1_random 305 362 (ATCCC)n 712 + 305 362 0 2 13,11, 0,46, +,+, 333753 Simple_repeat Simple_repeat 585 chr22_NT_463041v1_random 1873 5298 GGERV20_I-int 743 - 1873 5298 0 3 245,1947,922, 0,245,2503, -,-,-, 333768 LTR ERVL 585 chr22_NT_463042v1_random 387 3572 GGERV10_LTR 899 - 387 3572 0 2 216,2969, 0,216, -,-, 333772 LTR ERVL 585 chr22_NT_463046v1_random 5391 5456 (CCGTC)n 340 + 5391 5456 0 2 14,22, 0,43, +,+, 333788 Simple_repeat Simple_repeat 585 chr22_NT_463052v1_random 313 3454 GGERV10_LTR 923 - 313 3454 0 2 214,2927, 0,214, -,-, 333811 LTR ERVL 585 chr22_NT_463059v1_random 2136 2322 (C)n 939 + 2136 2322 0 3 37,29,34, 0,72,152, +,+,+, 333835 Simple_repeat Simple_repeat 585 chr22_NT_463059v1_random 2622 4319 GGERV20_I-int 733 + 2622 4319 0 4 271,69,236,648, 0,470,564,1049, +,+,+,+, 333837 LTR ERVL 585 chr22_NT_463064v1_random 2077 2439 (CATTG)n 415 + 2077 2439 0 2 198,143, 0,219, +,+, 333861 Simple_repeat Simple_repeat 585 chr22_NT_463066v1_random 695 1041 (GCATG)n 254 + 695 1041 0 2 127,60, 0,286, +,+, 333866 Simple_repeat Simple_repeat 585 chr22_NT_463066v1_random 1000 1556 (CACAG)n 338 + 1000 1556 0 2 191,344, 0,212, +,+, 333868 Simple_repeat Simple_repeat 585 chr22_NT_463066v1_random 2161 3177 (CACAG)n 279 + 2161 3177 0 3 482,273,185, 0,539,831, +,+,+, 333870 Simple_repeat Simple_repeat 585 chr22_NT_463068v1_random 1395 1733 (GCATG)n 193 + 1395 1733 0 2 159,153, 0,185, +,+, 333874 Simple_repeat Simple_repeat 585 chr22_NT_463076v1_random 1531 1679 CR1-F2 543 - 1531 1679 0 2 67,73, 0,75, -,-, 333908 LINE CR1 585 chr23 788 1060 CR1-C4 475 - 788 1060 0 2 167,105, 0,167, -,-, 333919 LINE CR1 585 chr23 3159 7172 CR1-C 759 - 3159 7172 0 4 571,295,1309,1559, 0,599,894,2454, -,-,-,-, 333923 LINE CR1 586 chr23 247815 249074 CR1-F2 533 - 247815 249074 0 2 986,269, 0,990, -,-, 334039 LINE CR1 587 chr23 285660 287271 CR1-G 357 - 285660 287271 0 2 31,163, 0,1448, -,-, 334063 LINE CR1 587 chr23 333850 334994 CR1-L3B_Croc 151 + 333850 334994 0 3 121,286,322, 0,380,822, +,+,+, 334096 LINE CR1 587 chr23 343437 344375 CR1-F2 563 + 343437 344375 0 2 554,384, 0,554, +,+, 334108 LINE CR1 588 chr23 408122 408710 CR1-X2 632 + 408122 408710 0 2 94,72, 0,516, +,+, 334153 LINE CR1 589 chr23 554163 554475 (CATCC)n 597 + 554163 554475 0 2 197,102, 0,210, +,+, 334238 Simple_repeat Simple_repeat 589 chr23 643463 643807 (TTAGGG)n 567 + 643463 643807 0 2 179,145, 0,199, +,+, 334312 Simple_repeat Simple_repeat 589 chr23 650186 650934 (TTAGGG)n 497 + 650186 650934 0 2 179,521, 0,227, +,+, 334316 Simple_repeat Simple_repeat 590 chr23 681364 681802 CR1-D 559 - 681364 681802 0 2 166,99, 0,339, -,-, 334341 LINE CR1 590 chr23 697035 697944 CR1-C2 853 + 697035 697944 0 2 339,124, 0,785, +,+, 334351 LINE CR1 590 chr23 754516 755059 CR1-C4 667 + 754516 755059 0 2 265,278, 0,265, +,+, 334391 LINE CR1 590 chr23 780049 780211 CR1-C2 792 - 780049 780211 0 2 93,69, 0,93, -,-, 334405 LINE CR1 591 chr23 837635 837775 CR1-C4 760 + 837635 837775 0 3 47,43,50, 0,47,90, +,+,+, 334445 LINE CR1 591 chr23 849702 852044 CR1-B2 663 + 849702 852044 0 2 175,67, 0,2275, +,+, 334455 LINE CR1 592 chr23 963591 963934 CR1-C4 546 - 963591 963934 0 2 58,237, 0,106, -,-, 334516 LINE CR1 592 chr23 987839 988039 CR1-C4 424 - 987839 988039 0 2 117,79, 0,121, -,-, 334530 LINE CR1 593 chr23 1091169 1091717 CR1-F2 438 + 1091169 1091717 0 2 180,368, 0,180, +,+, 334598 LINE CR1 593 chr23 1168346 1168892 CR1-F2 521 - 1168346 1168892 0 2 409,137, 0,409, -,-, 334655 LINE CR1 594 chr23 1188252 1189104 CR1-Y 348 - 1188252 1189104 0 2 654,63, 0,789, -,-, 334669 LINE CR1 594 chr23 1191349 1191651 CR1-F2 356 - 1191349 1191651 0 2 87,194, 0,108, -,-, 334671 LINE CR1 594 chr23 1206115 1206510 (CACCAT)n 398 + 1206115 1206510 0 2 153,63, 0,332, +,+, 334684 Simple_repeat Simple_repeat 594 chr23 1206876 1207144 (CAT)n 507 + 1206876 1207144 0 2 72,181, 0,87, +,+, 334688 Simple_repeat Simple_repeat 594 chr23 1223637 1223905 (ATG)n 507 + 1223637 1223905 0 2 181,72, 0,196, +,+, 334711 Simple_repeat Simple_repeat 594 chr23 1224128 1224670 (ATG)n 479 + 1224128 1224670 0 3 188,179,147, 0,203,395, +,+,+, 334713 Simple_repeat Simple_repeat 594 chr23 1236207 1236635 (ATG)n 528 + 1236207 1236635 0 3 94,186,72, 0,155,356, +,+,+, 334724 Simple_repeat Simple_repeat 594 chr23 1236858 1237242 (ATG)n 492 + 1236858 1237242 0 2 191,193, 0,191, +,+, 334726 Simple_repeat Simple_repeat 594 chr23 1250767 1251751 CR1-Y2 716 - 1250767 1251751 0 2 210,714, 0,270, -,-, 334747 LINE CR1 594 chr23 1255555 1255974 (TTGTG)n 524 + 1255555 1255974 0 2 196,47, 0,372, +,+, 334753 Simple_repeat Simple_repeat 594 chr23 1257190 1258036 CR1-Y 535 + 1257190 1258036 0 3 191,327,328, 0,191,518, +,+,+, 334758 LINE CR1 595 chr23 1324434 1324682 (GGAGA)n 862 + 1324434 1324682 0 2 180,39, 0,209, +,+, 334805 Simple_repeat Simple_repeat 595 chr23 1331823 1336311 CR1-H2 467 + 1331823 1336311 0 2 82,79, 0,4409, +,+, 334809 LINE CR1 595 chr23 1366198 1366506 CR1-E 762 - 1366198 1366506 0 2 170,138, 0,170, -,-, 334828 LINE CR1 595 chr23 1404997 1405323 CR1-F2 421 - 1404997 1405323 0 2 242,81, 0,245, -,-, 334852 LINE CR1 595 chr23 1440084 1440505 GGLTR8B 422 + 1440084 1440505 0 2 244,177, 0,244, +,+, 334871 LTR ERVL 596 chr23 1516090 1516949 CR1-Y2_Aves 261 + 1516090 1516949 0 2 155,117, 0,742, +,+, 334909 LINE CR1 596 chr23 1536674 1542440 CR1-D2 288 + 1536674 1542440 0 3 128,910,217, 0,642,5549, +,+,+, 334920 LINE CR1 597 chr23 1625711 1626731 CR1-F2 178 - 1625711 1626731 0 2 452,249, 0,771, -,-, 334963 LINE CR1 597 chr23 1675114 1675595 CR1-H 331 - 1675114 1675595 0 2 354,127, 0,354, -,-, 334999 LINE CR1 597 chr23 1689601 1690661 Char12Mar1_GG 412 - 1689601 1690661 0 2 539,383, 0,677, -,-, 335009 DNA hAT-Charlie 598 chr23 1718305 1718431 CR1-E 655 + 1718305 1718431 0 2 72,54, 0,72, +,+, 335026 LINE CR1 598 chr23 1747193 1748101 CR1-C4 518 + 1747193 1748101 0 2 610,278, 0,630, +,+, 335037 LINE CR1 598 chr23 1779743 1780821 CR1-Y2_Aves 218 + 1779743 1780821 0 2 649,111, 0,967, +,+, 335058 LINE CR1 598 chr23 1782218 1783067 CR1-X 161 + 1782218 1783067 0 2 244,498, 0,351, +,+, 335060 LINE CR1 599 chr23 1860997 1861118 G-rich 576 + 1860997 1861118 0 2 36,67, 0,54, +,+, 335098 Low_complexity Low_complexity 599 chr23 1871005 1871693 (TGGA)n 647 + 1871005 1871693 0 3 176,181,287, 0,195,401, +,+,+, 335107 Simple_repeat Simple_repeat 599 chr23 1889920 1889996 (CCATTC)n 384 + 1889920 1889996 0 2 6,6, 0,70, +,+, 335124 Simple_repeat Simple_repeat 600 chr23 1970065 1970357 (GGATG)n 256 + 1970065 1970357 0 2 19,106, 0,186, +,+, 335165 Simple_repeat Simple_repeat 600 chr23 1973392 1974102 (CATCC)n 685 + 1973392 1974102 0 2 176,520, 0,190, +,+, 335173 Simple_repeat Simple_repeat 600 chr23 2034265 2034324 (CGCTC)n 418 + 2034265 2034324 0 2 19,13, 0,46, +,+, 335230 Simple_repeat Simple_repeat 601 chr23 2214611 2214723 G-rich 607 + 2214611 2214723 0 2 33,35, 0,77, +,+, 335370 Low_complexity Low_complexity 602 chr23 2263477 2263608 G-rich 509 + 2263477 2263608 0 2 40,44, 0,87, +,+, 335413 Low_complexity Low_complexity 602 chr23 2292609 2293410 CR1-F2 90 + 2292609 2293410 0 2 439,225, 0,576, +,+, 335422 LINE CR1 603 chr23 2410651 2411113 CR1-C4 579 + 2410651 2411113 0 2 137,213, 0,249, +,+, 335476 LINE CR1 603 chr23 2416986 2417391 CR1-C4 375 - 2416986 2417391 0 2 103,295, 0,110, -,-, 335482 LINE CR1 603 chr23 2432285 2432427 CR1-C4 640 - 2432285 2432427 0 3 49,43,50, 0,49,92, -,-,-, 335494 LINE CR1 603 chr23 2442318 2442373 (TT)n 310 + 2442318 2442373 0 2 6,15, 0,40, +,+, 335507 Simple_repeat Simple_repeat 603 chr23 2487114 2487416 (ACCCCATAGGG)n 464 - 2487114 2487416 0 2 109,40, 0,262, -,-, 335540 Satellite Satellite 603 chr23 2488420 2489105 (CTCTATGGGG)n 428 - 2488420 2489105 0 3 267,131,232, 0,293,453, -,-,-, 335547 Satellite Satellite 603 chr23 2489335 2489646 (CTCTATGGGG)n 431 - 2489335 2489646 0 2 141,131, 0,180, -,-, 335549 Satellite Satellite 604 chr23 2575656 2575860 (GTGTCA)n 302 + 2575656 2575860 0 2 72,79, 0,125, +,+, 335598 Simple_repeat Simple_repeat 605 chr23 2683114 2683220 (GTGTGC)n 208 + 2683114 2683220 0 2 12,42, 0,64, +,+, 335644 Simple_repeat Simple_repeat 606 chr23 2754516 2754928 CR1-X1 664 - 2754516 2754928 0 2 228,184, 0,228, -,-, 335675 LINE CR1 606 chr23 2758798 2759260 (CATGC)n 700 + 2758798 2759260 0 2 154,132, 0,330, +,+, 335680 Simple_repeat Simple_repeat 606 chr23 2813368 2814341 GGERVL18-int 491 - 2813368 2814341 0 3 117,431,361, 0,181,612, -,-,-, 335716 LTR ERVL 606 chr23 2868021 2868137 CR1-E 480 - 2868021 2868137 0 2 40,37, 0,79, -,-, 335742 LINE CR1 607 chr23 2938121 2938642 CR1-D2 654 + 2938121 2938642 0 2 85,239, 0,282, +,+, 335777 LINE CR1 609 chr23 3248470 3248531 (CCGC)n 432 + 3248470 3248531 0 2 19,15, 0,46, +,+, 335893 Simple_repeat Simple_repeat 609 chr23 3254336 3254483 G-rich 447 + 3254336 3254483 0 2 52,48, 0,99, +,+, 335897 Low_complexity Low_complexity 610 chr23 3348981 3350356 CR1-C2 868 - 3348981 3350356 0 2 48,270, 0,1105, -,-, 335925 LINE CR1 611 chr23 3469415 3469500 (CCGGCG)n 402 + 3469415 3469500 0 2 40,12, 0,73, +,+, 335981 Simple_repeat Simple_repeat 612 chr23 3567393 3568077 CR1-D2 540 - 3567393 3568077 0 2 533,141, 0,543, -,-, 336014 LINE CR1 613 chr23 3692538 3692578 (CTTT)n 574 + 3692538 3692578 0 2 6,10, 0,30, +,+, 336060 Simple_repeat Simple_repeat 613 chr23 3737395 3737744 (CTGTG)n 388 + 3737395 3737744 0 2 143,27, 0,322, +,+, 336079 Simple_repeat Simple_repeat 614 chr23 3804975 3805508 (GGAGA)n 849 + 3804975 3805508 0 2 179,339, 0,194, +,+, 336103 Simple_repeat Simple_repeat 615 chr23 3946680 3947155 (TTAGGG)n 648 + 3946680 3947155 0 2 194,262, 0,213, +,+, 336177 Simple_repeat Simple_repeat 615 chr23 3952484 3952859 (GCATG)n 744 + 3952484 3952859 0 2 180,195, 0,180, +,+, 336180 Simple_repeat Simple_repeat 617 chr23 4267256 4267356 G-rich 294 + 4267256 4267356 0 2 54,19, 0,81, +,+, 336337 Low_complexity Low_complexity 617 chr23 4302940 4303492 CR1-D2 598 - 4302940 4303492 0 2 76,43, 0,509, -,-, 336350 LINE CR1 620 chr23 4690282 4690569 CR1-D2 353 - 4690282 4690569 0 2 185,102, 0,185, -,-, 336483 LINE CR1 624 chr23 5229920 5230208 CR1-F2 517 + 5229920 5230208 0 2 91,195, 0,93, +,+, 336686 LINE CR1 628 chr23 5650373 5654982 CR1-F2 460 + 5650373 5654982 0 2 80,102, 0,4507, +,+, 336859 LINE CR1 629 chr23 5782469 5786519 GGXHOI 458 - 5782469 5786519 0 6 1651,613,562,307,604,114, 0,1694,2350,2929,3288,3936, -,-,-,-,-,-, 336936 Satellite W-chromosome 585 chr23_NT_463082v1_random 8005 8274 CR1-C4 485 - 8005 8274 0 2 164,105, 0,164, -,-, 336942 LINE CR1 585 chr23_NT_463082v1_random 10367 14198 CR1-C 774 - 10367 14198 0 4 571,294,1319,1368, 0,599,893,2463, -,-,-,-, 336946 LINE CR1 585 chr23_NT_463082v1_random 29474 29738 CR1-C4 484 - 29474 29738 0 2 156,97, 0,167, -,-, 336962 LINE CR1 585 chr23_NT_463083v1_random 7625 8537 CR1-C2 835 + 7625 8537 0 2 175,506, 0,406, +,+, 336972 LINE CR1 585 chr23_NT_463083v1_random 17394 18307 CR1-C2 835 + 17394 18307 0 2 175,507, 0,406, +,+, 336982 LINE CR1 585 chr23_NT_463083v1_random 27493 29991 CR1-C 704 + 27493 29991 0 2 1364,881, 0,1617, +,+, 336994 LINE CR1 585 chr23_NT_463084v1_random 2373 6202 CR1-C 761 + 2373 6202 0 3 1367,1318,893, 0,1618,2936, +,+,+, 337001 LINE CR1 585 chr23_NT_463084v1_random 8295 8564 CR1-C4 432 + 8295 8564 0 2 131,138, 0,131, +,+, 337005 LINE CR1 585 chr23_NT_463085v1_random 17636 21445 CR1-C 750 + 17636 21445 0 3 1347,1318,893, 0,1598,2916, +,+,+, 337044 LINE CR1 585 chr23_NT_463086v1_random 13819 14088 CR1-C4 485 - 13819 14088 0 2 164,105, 0,164, -,-, 337061 LINE CR1 585 chr23_NT_463086v1_random 16179 19844 CR1-C 706 - 16179 19844 0 4 569,290,1247,1274, 0,600,890,2391, -,-,-,-, 337065 LINE CR1 585 chr23_NT_463088v1_random 5685 5954 CR1-C4 432 + 5685 5954 0 2 131,138, 0,131, +,+, 337109 LINE CR1 585 chr23_NT_463089v1_random 2789 6599 CR1-C 739 + 2789 6599 0 3 1363,1315,881, 0,1614,2929, +,+,+, 337131 LINE CR1 585 chr23_NT_463089v1_random 8678 8946 CR1-C4 439 + 8678 8946 0 2 130,138, 0,130, +,+, 337135 LINE CR1 585 chr23_NT_463090v1_random 8975 9244 CR1-C4 485 - 8975 9244 0 2 164,105, 0,164, -,-, 337149 LINE CR1 585 chr23_NT_463090v1_random 11336 15157 CR1-C 762 - 11336 15157 0 4 570,292,1309,1369, 0,600,892,2452, -,-,-,-, 337153 LINE CR1 585 chr23_NT_463091v1_random 13193 18439 CR1-C 390 - 13193 18439 0 3 163,93,2047, 0,163,3199, -,-,-, 337172 LINE CR1 585 chr23_NT_463091v1_random 15519 16393 CR1-C 784 - 15519 16393 0 2 562,284, 0,590, -,-, 337174 LINE CR1 585 chr23_NT_463092v1_random 8030 11834 CR1-C 749 + 8030 11834 0 3 1347,1316,890, 0,1598,2914, +,+,+, 337185 LINE CR1 585 chr23_NT_463092v1_random 13923 14192 CR1-C4 432 + 13923 14192 0 2 131,138, 0,131, +,+, 337189 LINE CR1 585 chr23_NT_463093v1_random 7522 13802 GGXHOI 490 - 7522 13802 0 4 1136,641,1839,2601, 0,1157,1819,3679, -,-,-,-, 337197 Satellite W-chromosome 585 chr23_NT_463094v1_random 4394 4687 (CTCTATGGGG)n 411 + 4394 4687 0 2 131,136, 0,157, +,+, 337205 Satellite Satellite 585 chr23_NT_463096v1_random 5974 12214 CR1-C 392 - 5974 12214 0 2 164,2992, 0,3248, -,-, 337222 LINE CR1 585 chr23_NT_463096v1_random 8331 9223 CR1-C 810 - 8331 9223 0 2 571,294, 0,598, -,-, 337227 LINE CR1 585 chr23_NT_463104v1_random 2627 3631 GGXHOI 421 + 2627 3631 0 2 477,512, 0,492, +,+, 337253 Satellite W-chromosome 585 chr23_NT_463104v1_random 4769 6533 GGXHOI 391 + 4769 6533 0 5 688,500,107,227,154, 0,735,1249,1367,1610, +,+,+,+,+, 337254 Satellite W-chromosome 585 chr23_NT_463109v1_random 1232 1522 (CTCTATGGGG)n 396 + 1232 1522 0 2 130,125, 0,165, +,+, 337265 Satellite Satellite 585 chr23_NT_463119v1_random 2530 3641 GGXHOI 468 - 2530 3641 0 2 321,779, 0,332, -,-, 337294 Satellite W-chromosome 585 chr23_NT_463120v1_random 2124 3511 GGXHOI 366 - 2124 3511 0 2 1151,223, 0,1164, -,-, 337296 Satellite W-chromosome 585 chr23_NT_463122v1_random 2444 3025 (CATCC)n 716 + 2444 3025 0 2 380,180, 0,401, +,+, 337302 Simple_repeat Simple_repeat 585 chr23_NT_463123v1_random 1377 1673 G-rich 474 + 1377 1673 0 2 138,97, 0,199, +,+, 337310 Low_complexity Low_complexity 586 chr24 134440 135917 CR1-H 748 - 134440 135917 0 2 1431,40, 0,1437, -,-, 337421 LINE CR1 586 chr24 142347 142696 CR1-X1 688 + 142347 142696 0 2 64,51, 0,298, +,+, 337427 LINE CR1 587 chr24 282840 283659 CR1-Y4 475 + 282840 283659 0 2 346,471, 0,348, +,+, 337492 LINE CR1 587 chr24 300907 301286 (CCCATC)n 208 + 300907 301286 0 2 34,302, 0,77, +,+, 337500 Simple_repeat Simple_repeat 587 chr24 310294 310469 CR1-C4 515 + 310294 310469 0 2 79,96, 0,79, +,+, 337503 LINE CR1 587 chr24 310535 313308 CR1-F2 380 + 310535 313308 0 2 13,571, 0,2202, +,+, 337504 LINE CR1 587 chr24 369767 369868 (CATCCC)n 260 + 369767 369868 0 2 7,56, 0,45, +,+, 337535 Simple_repeat Simple_repeat 587 chr24 380145 380276 (CCCGC)n 342 + 380145 380276 0 2 101,6, 0,125, +,+, 337546 Simple_repeat Simple_repeat 589 chr24 554583 554904 CR1-C4 644 - 554583 554904 0 2 146,158, 0,163, -,-, 337628 LINE CR1 589 chr24 568646 568704 (TTGT)n 366 + 568646 568704 0 2 21,13, 0,45, +,+, 337642 Simple_repeat Simple_repeat 590 chr24 660676 660887 CR1-F2 449 + 660676 660887 0 2 121,74, 0,137, +,+, 337683 LINE CR1 590 chr24 684596 684637 (ACCCCGC)n 472 + 684596 684637 0 2 8,8, 0,33, +,+, 337693 Simple_repeat Simple_repeat 590 chr24 716169 716762 CR1-L3A_Croc 462 - 716169 716762 0 2 132,340, 0,253, -,-, 337708 LINE CR1 591 chr24 818579 818630 (CCCTC)n 528 + 818579 818630 0 2 6,10, 0,41, +,+, 337754 Simple_repeat Simple_repeat 592 chr24 1000586 1000940 CR1-11_Crp 328 - 1000586 1000940 0 2 187,76, 0,278, -,-, 337837 LINE CR1 593 chr24 1130386 1130451 (TTTGT)n 438 + 1130386 1130451 0 2 6,27, 0,38, +,+, 337888 Simple_repeat Simple_repeat 593 chr24 1142695 1143878 CR1-F 874 - 1142695 1143878 0 2 609,571, 0,612, -,-, 337893 LINE CR1 593 chr24 1163463 1166839 Z-REP 440 - 1163463 1166839 0 2 299,818, 0,2558, -,-, 337898 Satellite macro 594 chr24 1192828 1193283 Z-REP 363 - 1192828 1193283 0 2 276,128, 0,327, -,-, 337905 Satellite macro 594 chr24 1199270 1202638 Z-REP 570 - 1199270 1202638 0 4 407,108,271,375, 0,1420,1692,2993, -,-,-,-, 337908 Satellite macro 594 chr24 1223469 1225830 Z-REP 366 - 1223469 1225830 0 2 1154,1168, 0,1193, -,-, 337915 Satellite macro 594 chr24 1238526 1238808 CR1-C4 485 + 1238526 1238808 0 2 177,105, 0,177, +,+, 337919 LINE CR1 595 chr24 1387798 1387885 (A)n 741 + 1387798 1387885 0 2 25,27, 0,60, +,+, 337959 Simple_repeat Simple_repeat 595 chr24 1439393 1440083 CR1-Y4 528 - 1439393 1440083 0 2 76,590, 0,100, -,-, 337987 LINE CR1 597 chr24 1663397 1664517 CR1-H2 299 - 1663397 1664517 0 2 155,202, 0,918, -,-, 338037 LINE CR1 599 chr24 1889577 1891632 CR1-F2 358 - 1889577 1891632 0 2 97,227, 0,1828, -,-, 338134 LINE CR1 599 chr24 1921500 1922094 UCON27 502 - 1921500 1922094 0 2 78,101, 0,493, -,-, 338154 Unknown Unknown 600 chr24 1995774 1997148 CR1-F2 496 - 1995774 1997148 0 2 106,83, 0,1291, -,-, 338213 LINE CR1 600 chr24 2031799 2032537 CR1-L3B_Croc 216 - 2031799 2032537 0 2 391,159, 0,579, -,-, 338232 LINE CR1 602 chr24 2252635 2252921 CR1-Y4 439 - 2252635 2252921 0 2 156,130, 0,156, -,-, 338377 LINE CR1 603 chr24 2371378 2371650 CR1-Y2_Aves 368 - 2371378 2371650 0 2 135,62, 0,210, -,-, 338435 LINE CR1 603 chr24 2386357 2387250 CR1-H 617 + 2386357 2387250 0 2 58,88, 0,805, +,+, 338446 LINE CR1 613 chr24 3713199 3713371 CR1-E 146 - 3713199 3713371 0 2 19,124, 0,48, -,-, 338962 LINE CR1 617 chr24 4197457 4198001 CR1-Y2_Aves 150 + 4197457 4198001 0 2 206,217, 0,327, +,+, 339209 LINE CR1 618 chr24 4331633 4331898 CR1-C 829 - 4331633 4331898 0 2 151,114, 0,151, -,-, 339276 LINE CR1 618 chr24 4342211 4342380 (T)n 752 + 4342211 4342380 0 2 78,32, 0,137, +,+, 339282 Simple_repeat Simple_repeat 619 chr24 4503997 4504157 CR1-C4 584 + 4503997 4504157 0 3 55,52,53, 0,55,107, +,+,+, 339353 LINE CR1 619 chr24 4554472 4554570 (TG)n 1000 + 4554472 4554570 0 2 22,28, 0,70, +,+, 339379 Simple_repeat Simple_repeat 619 chr24 4561404 4561689 CR1-C4 560 + 4561404 4561689 0 2 112,173, 0,112, +,+, 339384 LINE CR1 621 chr24 4761930 4762475 CR1-C4 602 + 4761930 4762475 0 2 45,498, 0,47, +,+, 339501 LINE CR1 622 chr24 4936759 4936870 (AAT)n 701 + 4936759 4936870 0 2 24,28, 0,83, +,+, 339611 Simple_repeat Simple_repeat 622 chr24 4938745 4939292 CR1-C4 552 + 4938745 4939292 0 2 182,365, 0,182, +,+, 339612 LINE CR1 622 chr24 4979212 4980381 Char12Mar1_GG 538 - 4979212 4980381 0 2 868,279, 0,890, -,-, 339633 DNA hAT-Charlie 623 chr24 5035785 5036250 CR1-D2 570 + 5035785 5036250 0 2 140,325, 0,140, +,+, 339666 LINE CR1 627 chr24 5593793 5596596 CR1-H2 687 - 5593793 5596596 0 2 64,895, 0,1908, -,-, 339908 LINE CR1 627 chr24 5627238 5627916 CR1-C4 612 + 5627238 5627916 0 2 335,343, 0,335, +,+, 339932 LINE CR1 627 chr24 5628509 5629256 CR1-Y4 645 + 5628509 5629256 0 2 144,603, 0,144, +,+, 339934 LINE CR1 628 chr24 5690956 5691976 Char12Mar1_GG 544 - 5690956 5691976 0 2 878,142, 0,878, -,-, 339966 DNA hAT-Charlie 628 chr24 5753990 5754874 CR1-D2 600 - 5753990 5754874 0 2 590,294, 0,590, -,-, 340009 LINE CR1 628 chr24 5762725 5763333 CR1-C4 743 + 5762725 5763333 0 2 346,257, 0,351, +,+, 340012 LINE CR1 629 chr24 5863219 5863951 CR1-C4 592 - 5863219 5863951 0 2 164,534, 0,198, -,-, 340074 LINE CR1 629 chr24 5884611 5885636 Char12Mar1_GG 546 - 5884611 5885636 0 2 612,413, 0,612, -,-, 340090 DNA hAT-Charlie 630 chr24 5910556 5911470 CR1-C4 672 - 5910556 5911470 0 2 265,644, 0,270, -,-, 340111 LINE CR1 630 chr24 5914584 5915193 CR1-F2 506 + 5914584 5915193 0 2 275,334, 0,275, +,+, 340112 LINE CR1 630 chr24 5922568 5923141 CR1-C4 721 + 5922568 5923141 0 2 305,263, 0,310, +,+, 340118 LINE CR1 630 chr24 5956493 5957218 CR1-D2 638 - 5956493 5957218 0 2 478,247, 0,478, -,-, 340141 LINE CR1 630 chr24 6001789 6002294 CR1-C4 687 + 6001789 6002294 0 2 297,208, 0,297, +,+, 340175 LINE CR1 630 chr24 6002856 6004035 CR1-C4 619 + 6002856 6004035 0 2 958,216, 0,963, +,+, 340176 LINE CR1 630 chr24 6022095 6022486 CR1-C4 747 - 6022095 6022486 0 2 204,185, 0,206, -,-, 340189 LINE CR1 631 chr24 6034678 6035398 CR1-C4 693 - 6034678 6035398 0 2 523,197, 0,523, -,-, 340200 LINE CR1 631 chr24 6074988 6075310 CR1-D2 487 - 6074988 6075310 0 2 243,79, 0,243, -,-, 340235 LINE CR1 631 chr24 6080143 6083662 CR1-H2 614 + 6080143 6083662 0 2 1225,146, 0,3373, +,+, 340240 LINE CR1 631 chr24 6084322 6084994 Char12Mar1_GG 600 - 6084322 6084994 0 2 187,458, 0,214, -,-, 340243 DNA hAT-Charlie 631 chr24 6103753 6104725 Char12Mar1_GG 569 - 6103753 6104725 0 2 882,90, 0,882, -,-, 340254 DNA hAT-Charlie 632 chr24 6185636 6186381 CR1-F2 548 - 6185636 6186381 0 2 66,679, 0,66, -,-, 340297 LINE CR1 632 chr24 6217547 6217876 CR1-F2 600 - 6217547 6217876 0 2 184,130, 0,199, -,-, 340305 LINE CR1 632 chr24 6224846 6226620 CR1-C4 711 + 6224846 6226620 0 3 384,370,249, 0,1150,1525, +,+,+, 340310 LINE CR1 632 chr24 6233153 6233240 (T)n 930 + 6233153 6233240 0 2 17,30, 0,57, +,+, 340314 Simple_repeat Simple_repeat 632 chr24 6249422 6250589 Char12Mar1_GG 488 - 6249422 6250589 0 2 949,216, 0,951, -,-, 340320 DNA hAT-Charlie 632 chr24 6264256 6264799 CR1-X2 550 + 6264256 6264799 0 2 292,251, 0,292, +,+, 340331 LINE CR1 585 chr24_NT_463148v1_random 1297 1866 (CCTTG)n 684 + 1297 1866 0 2 244,67, 0,502, +,+, 340355 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 3710 4747 (CCTTG)n 608 + 3710 4747 0 2 512,511, 0,526, +,+, 340367 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 4531 5017 (GCCTG)n 519 + 4531 5017 0 3 124,77,115, 0,282,371, +,+,+, 340368 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 5003 5415 (CCTTG)n 613 + 5003 5415 0 2 181,231, 0,181, +,+, 340371 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 5430 5734 (CCTTG)n 698 + 5430 5734 0 2 105,12, 0,292, +,+, 340373 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 5960 6681 (CCTTG)n 573 + 5960 6681 0 2 381,340, 0,381, +,+, 340376 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 6773 7255 (CCTTG)n 608 + 6773 7255 0 2 198,96, 0,386, +,+, 340378 Simple_repeat Simple_repeat 585 chr24_NT_463148v1_random 26146 26614 CR1-X2 428 + 26146 26614 0 2 243,211, 0,257, +,+, 340385 LINE CR1 585 chr24_NT_463148v1_random 34093 36174 GGERVL-B-int 727 + 34093 36174 0 4 229,204,929,621, 0,295,501,1460, +,+,+,+, 340391 LTR ERVL 585 chr24_NT_463148v1_random 42408 44489 GGERVL-B-int 775 - 42408 44489 0 3 621,929,499, 0,651,1582, -,-,-, 340400 LTR ERVL 585 chr24_NT_463148v1_random 51974 52442 CR1-X2 428 - 51974 52442 0 2 211,243, 0,225, -,-, 340407 LINE CR1 585 chr24_NT_463148v1_random 74061 75228 Char12Mar1_GG 488 - 74061 75228 0 2 949,216, 0,951, -,-, 340426 DNA hAT-Charlie 585 chr24_NT_463150v1_random 3235 3469 GGXHOI 498 + 3235 3469 0 2 61,152, 0,82, +,+, 340444 Satellite W-chromosome 585 chr24_NT_463150v1_random 6358 11658 GGXHOI 454 + 6358 11658 0 8 180,1644,818,1110,150,275,818,150, 0,196,1856,2690,3816,4025,4316,5150, +,+,+,+,+,+,+,+, 340445 Satellite W-chromosome 585 chr24_NT_463150v1_random 11747 14675 GGXHOI 449 + 11747 14675 0 4 2241,150,311,175, 0,2257,2424,2753, +,+,+,+, 340446 Satellite W-chromosome 585 chr24_NT_463153v1_random 5927 11058 GGXHOI 382 + 5927 11058 0 8 144,1274,312,803,768,177,386,992, 0,160,1492,1820,2665,3495,3721,4139, +,+,+,+,+,+,+,+, 340460 Satellite W-chromosome 585 chr24_NT_463155v1_random 3752 5119 CR1-F2 496 - 3752 5119 0 2 106,83, 0,1284, -,-, 340467 LINE CR1 585 chr24_NT_463155v1_random 6035 7399 CR1-F2 496 - 6035 7399 0 2 106,83, 0,1281, -,-, 340469 LINE CR1 585 chr25 1289 1352 (C)n 951 + 1289 1352 0 2 24,21, 0,42, +,+, 340583 Simple_repeat Simple_repeat 585 chr25 9174 9540 CR1-D2 302 - 9174 9540 0 2 81,285, 0,81, -,-, 340590 LINE CR1 585 chr25 20364 21160 CR1-C2 578 + 20364 21160 0 2 309,487, 0,309, +,+, 340599 LINE CR1 585 chr25 35554 36006 (CTGTG)n 208 + 35554 36006 0 2 173,225, 0,227, +,+, 340616 Simple_repeat Simple_repeat 585 chr25 52246 53035 CR1-C2 564 + 52246 53035 0 2 304,485, 0,304, +,+, 340633 LINE CR1 585 chr25 73177 74058 GGERVL-C-int 679 + 73177 74058 0 2 270,610, 0,271, +,+, 340658 LTR ERVL 585 chr25 74559 74765 CR1-E 619 - 74559 74765 0 3 53,56,50, 0,100,156, -,-,-, 340660 LINE CR1 585 chr25 78579 79880 CR1-C4 559 + 78579 79880 0 2 726,438, 0,863, +,+, 340666 LINE CR1 585 chr25 88078 88953 CR1-Y 518 + 88078 88953 0 2 395,317, 0,558, +,+, 340671 LINE CR1 585 chr25 88953 89309 GGLTR3G1 831 + 88953 89309 0 2 326,30, 0,326, +,+, 340673 LTR ERVL 586 chr25 147756 149888 CR1-X 563 + 147756 149888 0 3 541,649,51, 0,909,2081, +,+,+, 340712 LINE CR1 586 chr25 148297 148665 GGERV10_LTR 471 + 148297 148665 0 2 52,157, 0,211, +,+, 340713 LTR ERVL 586 chr25 182215 182949 (CAGGC)n 592 + 182215 182949 0 3 90,185,101, 0,268,633, +,+,+, 340739 Simple_repeat Simple_repeat 586 chr25 182871 183216 (CAAGG)n 598 + 182871 183216 0 2 114,49, 0,296, +,+, 340742 Simple_repeat Simple_repeat 586 chr25 196892 198638 CR1-Y4 572 - 196892 198638 0 4 147,323,317,395, 0,192,870,1351, -,-,-,-, 340756 LINE CR1 586 chr25 197408 197762 GGLTR3G1 834 - 197408 197762 0 2 40,314, 0,40, -,-, 340757 LTR ERVL 586 chr25 206848 208149 CR1-C4 557 - 206848 208149 0 2 438,726, 0,575, -,-, 340761 LINE CR1 586 chr25 213903 214781 GGERVL-C-int 673 - 213903 214781 0 2 607,270, 0,608, -,-, 340769 LTR ERVL 586 chr25 222875 223489 (CACAG)n 332 + 222875 223489 0 2 216,40, 0,574, +,+, 340779 Simple_repeat Simple_repeat 586 chr25 223842 224212 (CAGTG)n 392 + 223842 224212 0 2 145,42, 0,328, +,+, 340786 Simple_repeat Simple_repeat 586 chr25 231932 232171 CR1-C 607 - 231932 232171 0 2 104,111, 0,128, -,-, 340798 LINE CR1 586 chr25 232250 233720 CR1-C 730 - 232250 233720 0 2 639,238, 0,1232, -,-, 340801 LINE CR1 586 chr25 235414 235819 (CCCTAA)n 464 + 235414 235819 0 2 170,181, 0,224, +,+, 340806 Simple_repeat Simple_repeat 586 chr25 235895 236339 (CCCTAA)n 503 + 235895 236339 0 2 248,172, 0,272, +,+, 340808 Simple_repeat Simple_repeat 587 chr25 263446 263699 (ACCCATTGGG)n 304 - 263446 263699 0 2 109,109, 0,144, -,-, 340861 Satellite Satellite 587 chr25 269704 270254 CR1-Y4 455 - 269704 270254 0 3 162,206,74, 0,169,476, -,-,-, 340867 LINE CR1 587 chr25 271344 271616 CR1-B 449 - 271344 271616 0 5 64,52,52,52,52, 0,64,116,168,220, -,-,-,-,-, 340869 LINE CR1 587 chr25 271602 272903 CR1-E 313 - 271602 272903 0 3 376,179,455, 0,554,846, -,-,-, 340870 LINE CR1 587 chr25 272979 273084 CR1-E 594 - 272979 273084 0 2 54,51, 0,54, -,-, 340872 LINE CR1 587 chr25 273381 273486 CR1-C4 557 - 273381 273486 0 2 54,51, 0,54, -,-, 340873 LINE CR1 590 chr25 777780 780454 GGXHOI 370 + 777780 780454 0 3 234,682,1675, 0,256,999, +,+,+, 340886 Satellite W-chromosome 590 chr25 782624 783326 CR1-C4 223 - 782624 783326 0 2 329,293, 0,409, -,-, 340888 LINE CR1 591 chr25 789003 791728 GGXHOI 400 + 789003 791728 0 4 225,229,1054,1158, 0,248,497,1567, +,+,+,+, 340893 Satellite W-chromosome 591 chr25 793875 795259 GGXHOI 414 + 793875 795259 0 2 953,409, 0,975, +,+, 340895 Satellite W-chromosome 591 chr25 795372 796072 CR1-C4 220 - 795372 796072 0 2 327,293, 0,407, -,-, 340896 LINE CR1 591 chr25 800399 801409 GGLTR11-int 387 - 800399 801409 0 3 352,54,565, 0,391,445, -,-,-, 340899 LTR ERV1 591 chr25 801419 801852 GGLTR7-int 449 + 801419 801852 0 2 193,162, 0,271, +,+, 340901 LTR ERV1 591 chr25 802491 803162 CR1-Y2 588 + 802491 803162 0 2 532,139, 0,532, +,+, 340902 LINE CR1 591 chr25 822468 823786 (CTGTG)n 610 + 822468 823786 0 3 158,8,26, 0,926,1292, +,+,+, 340915 Simple_repeat Simple_repeat 591 chr25 822626 823394 (CATGC)n 357 + 822626 823394 0 3 178,218,194, 0,178,574, +,+,+, 340916 Simple_repeat Simple_repeat 591 chr25 844414 845986 GGXHOI 432 + 844414 845986 0 2 584,968, 0,604, +,+, 340961 Satellite W-chromosome 591 chr25 846153 846853 CR1-C4 231 - 846153 846853 0 2 328,292, 0,408, -,-, 340962 LINE CR1 591 chr25 867736 869224 GGXHOI 371 + 867736 869224 0 4 178,262,672,256, 0,204,497,1232, +,+,+,+, 340975 Satellite W-chromosome 591 chr25 872047 873813 GGXHOI 428 + 872047 873813 0 2 1264,486, 0,1280, +,+, 340977 Satellite W-chromosome 592 chr25 925943 926034 (CCCCA)n 286 + 925943 926034 0 2 11,53, 0,38, +,+, 341004 Simple_repeat Simple_repeat 592 chr25 989166 989782 GGLTR11 781 + 989166 989782 0 2 289,248, 0,368, +,+, 341046 LTR ERV1 595 chr25 1311485 1311616 G-rich 390 + 1311485 1311616 0 2 20,94, 0,37, +,+, 341173 Low_complexity Low_complexity 595 chr25 1345200 1345269 (TTTGT)n 548 + 1345200 1345269 0 2 13,6, 0,63, +,+, 341207 Simple_repeat Simple_repeat 595 chr25 1354386 1354760 (TCCA)n 614 + 1354386 1354760 0 2 132,62, 0,312, +,+, 341220 Simple_repeat Simple_repeat 596 chr25 1473790 1473872 GA-rich 292 + 1473790 1473872 0 2 41,22, 0,60, +,+, 341294 Low_complexity Low_complexity 596 chr25 1554674 1555220 (TTAGGG)n 581 + 1554674 1555220 0 2 341,190, 0,356, +,+, 341379 Simple_repeat Simple_repeat 597 chr25 1624429 1625450 (CCCTAA)n 573 + 1624429 1625450 0 4 367,190,188,191, 0,423,628,830, +,+,+,+, 341433 Simple_repeat Simple_repeat 597 chr25 1626069 1626440 (GGGAA)n 943 + 1626069 1626440 0 2 176,174, 0,197, +,+, 341440 Simple_repeat Simple_repeat 597 chr25 1636288 1636746 (ACCCCATAGGG)n 439 + 1636288 1636746 0 2 149,259, 0,199, +,+, 341452 Satellite Satellite 597 chr25 1642492 1642911 (TGGGG)n 704 + 1642492 1642911 0 6 29,29,29,29,29,29, 0,78,156,234,312,390, +,+,+,+,+,+, 341455 Simple_repeat Simple_repeat 597 chr25 1644815 1644911 G-rich 530 + 1644815 1644911 0 2 42,16, 0,80, +,+, 341463 Low_complexity Low_complexity 597 chr25 1659967 1660189 (CTCTATGGGG)n 426 + 1659967 1660189 0 2 119,79, 0,143, +,+, 341485 Satellite Satellite 597 chr25 1696093 1696247 G-rich 451 + 1696093 1696247 0 2 68,32, 0,122, +,+, 341509 Low_complexity Low_complexity 597 chr25 1698508 1698670 G-rich 463 + 1698508 1698670 0 2 73,35, 0,127, +,+, 341513 Low_complexity Low_complexity 598 chr25 1717413 1717538 (ATGG)n 912 + 1717413 1717538 0 2 33,44, 0,81, +,+, 341548 Simple_repeat Simple_repeat 598 chr25 1721382 1721589 CR1-Y1_Aves 397 - 1721382 1721589 0 2 142,65, 0,142, -,-, 341557 LINE CR1 598 chr25 1729503 1729594 (CGG)n 466 + 1729503 1729594 0 2 8,7, 0,84, +,+, 341562 Simple_repeat Simple_repeat 598 chr25 1771755 1772228 CR1-C3 686 - 1771755 1772228 0 2 207,266, 0,207, -,-, 341599 LINE CR1 598 chr25 1782875 1783294 (GCATG)n 446 + 1782875 1783294 0 2 193,226, 0,193, +,+, 341610 Simple_repeat Simple_repeat 598 chr25 1783207 1783536 (CATAG)n 470 + 1783207 1783536 0 2 58,8, 0,321, +,+, 341611 Simple_repeat Simple_repeat 598 chr25 1812862 1812986 (GGAC)n 765 + 1812862 1812986 0 2 32,51, 0,73, +,+, 341646 Simple_repeat Simple_repeat 598 chr25 1818808 1818990 G-rich 513 + 1818808 1818990 0 2 82,49, 0,133, +,+, 341662 Low_complexity Low_complexity 598 chr25 1831198 1831293 (C)n 740 + 1831198 1831293 0 2 22,33, 0,62, +,+, 341680 Simple_repeat Simple_repeat 599 chr25 1888440 1891253 CR1-Y1_Aves 295 - 1888440 1891253 0 2 129,130, 0,2683, -,-, 341737 LINE CR1 599 chr25 1914319 1914684 CR1-D2 308 + 1914319 1914684 0 2 94,152, 0,213, +,+, 341755 LINE CR1 599 chr25 1953110 1953205 (CCT)n 751 + 1953110 1953205 0 2 32,29, 0,66, +,+, 341769 Simple_repeat Simple_repeat 599 chr25 1953416 1953511 (CCT)n 861 + 1953416 1953511 0 2 29,32, 0,63, +,+, 341771 Simple_repeat Simple_repeat 599 chr25 1953685 1953782 (ACC)n 621 + 1953685 1953782 0 2 28,37, 0,60, +,+, 341774 Simple_repeat Simple_repeat 599 chr25 1953947 1954045 (CCT)n 798 + 1953947 1954045 0 2 32,32, 0,66, +,+, 341776 Simple_repeat Simple_repeat 600 chr25 2036477 2036537 (TCCTC)n 288 + 2036477 2036537 0 2 20,6, 0,54, +,+, 341811 Simple_repeat Simple_repeat 600 chr25 2050590 2051018 CR1-C2 766 + 2050590 2051018 0 2 91,257, 0,171, +,+, 341817 LINE CR1 600 chr25 2076014 2076067 (GCCCC)n 456 + 2076014 2076067 0 2 10,13, 0,40, +,+, 341830 Simple_repeat Simple_repeat 601 chr25 2175785 2175827 (CCCTCT)n 576 + 2175785 2175827 0 2 13,7, 0,35, +,+, 341926 Simple_repeat Simple_repeat 601 chr25 2178500 2178645 A-rich 601 + 2178500 2178645 0 2 55,66, 0,79, +,+, 341928 Low_complexity Low_complexity 602 chr25 2261836 2262036 TguLTR5e 405 - 2261836 2262036 0 2 144,56, 0,144, -,-, 341988 LTR ERVL 602 chr25 2345182 2345288 (CCCATC)n 368 + 2345182 2345288 0 2 6,57, 0,49, +,+, 342036 Simple_repeat Simple_repeat 603 chr25 2413089 2413255 GGLTR5A 361 + 2413089 2413255 0 2 70,93, 0,73, +,+, 342089 LTR ERVL 603 chr25 2413626 2413918 CR1-C4 267 + 2413626 2413918 0 2 163,129, 0,163, +,+, 342090 LINE CR1 604 chr25 2490890 2492341 CR1-F2 501 - 2490890 2492341 0 2 68,105, 0,1346, -,-, 342155 LINE CR1 604 chr25 2534299 2534664 CR1-C3 568 + 2534299 2534664 0 2 191,50, 0,315, +,+, 342209 LINE CR1 604 chr25 2547718 2547823 CR1-C4 664 - 2547718 2547823 0 2 53,52, 0,53, -,-, 342233 LINE CR1 604 chr25 2584015 2584123 CR1-F2 508 - 2584015 2584123 0 2 12,83, 0,25, -,-, 342268 LINE CR1 604 chr25 2588674 2588727 (CCCACC)n 628 + 2588674 2588727 0 2 10,16, 0,37, +,+, 342273 Simple_repeat Simple_repeat 605 chr25 2664327 2664597 (ACCCCATAGGG)n 395 + 2664327 2664597 0 2 111,134, 0,136, +,+, 342333 Satellite Satellite 605 chr25 2714531 2714860 CR1-D2 407 - 2714531 2714860 0 2 170,153, 0,176, -,-, 342377 LINE CR1 606 chr25 2755314 2756667 CR1-F2 399 - 2755314 2756667 0 3 89,199,209, 0,945,1144, -,-,-, 342411 LINE CR1 606 chr25 2822450 2822561 CR1-X1 700 - 2822450 2822561 0 2 60,49, 0,62, -,-, 342447 LINE CR1 606 chr25 2840810 2843506 CR1-B2 474 + 2840810 2843506 0 2 118,60, 0,2636, +,+, 342463 LINE CR1 607 chr25 2904899 2906281 GGXHOI 475 + 2904899 2906281 0 2 1175,188, 0,1194, +,+, 342531 Satellite W-chromosome 585 chr25_NT_463194v1_random 5247 7634 GGXHOI 419 + 5247 7634 0 3 1221,682,444, 0,1245,1943, +,+,+, 342566 Satellite W-chromosome 585 chr25_NT_463194v1_random 8833 10645 GGXHOI 420 + 8833 10645 0 2 592,1172, 0,640, +,+, 342568 Satellite W-chromosome 585 chr25_NT_463194v1_random 10812 11512 CR1-C4 226 - 10812 11512 0 2 327,293, 0,407, -,-, 342569 LINE CR1 585 chr25_NT_463194v1_random 19616 22073 GGXHOI 396 + 19616 22073 0 4 478,221,427,1258, 0,500,746,1199, +,+,+,+, 342574 Satellite W-chromosome 585 chr25_NT_463196v1_random 8718 9423 CR1-C4 218 + 8718 9423 0 2 295,329, 0,376, +,+, 342583 LINE CR1 585 chr25_NT_463196v1_random 16606 17088 GGLTR3F1 891 + 16606 17088 0 2 230,199, 0,283, +,+, 342587 LTR ERVL 585 chr25_NT_463197v1_random 5860 8067 GGXHOI 427 + 5860 8067 0 2 1871,318, 0,1889, +,+, 342593 Satellite W-chromosome 585 chr25_NT_463197v1_random 9263 12041 GGXHOI 434 + 9263 12041 0 2 803,1955, 0,823, +,+, 342595 Satellite W-chromosome 585 chr25_NT_463197v1_random 12128 13593 GGXHOI 444 + 12128 13593 0 2 1329,114, 0,1351, +,+, 342596 Satellite W-chromosome 585 chr25_NT_463197v1_random 13712 14408 CR1-C4 227 - 13712 14408 0 2 329,287, 0,409, -,-, 342597 LINE CR1 585 chr25_NT_463198v1_random 5209 7225 GGXHOI 442 + 5209 7225 0 3 1214,603,114, 0,1277,1902, +,+,+, 342605 Satellite W-chromosome 585 chr25_NT_463198v1_random 7344 8045 CR1-C4 233 - 7344 8045 0 2 328,293, 0,408, -,-, 342606 LINE CR1 585 chr25_NT_463198v1_random 16629 18025 GGXHOI 424 + 16629 18025 0 2 1190,143, 0,1253, +,+, 342613 Satellite W-chromosome 585 chr25_NT_463198v1_random 18116 19301 GGXHOI 370 + 18116 19301 0 2 649,519, 0,666, +,+, 342614 Satellite W-chromosome 585 chr25_NT_463199v1_random 3230 3916 CR1-C4 200 + 3230 3916 0 2 273,333, 0,353, +,+, 342616 LINE CR1 585 chr25_NT_463199v1_random 4079 7642 GGXHOI 441 - 4079 7642 0 2 2742,801, 0,2762, -,-, 342617 Satellite W-chromosome 585 chr25_NT_463199v1_random 17304 18003 CR1-C4 213 + 17304 18003 0 2 292,329, 0,370, +,+, 342622 LINE CR1 585 chr25_NT_463200v1_random 3627 4329 CR1-C4 230 + 3627 4329 0 2 293,329, 0,373, +,+, 342626 LINE CR1 585 chr25_NT_463200v1_random 4496 5992 GGXHOI 428 - 4496 5992 0 3 544,157,736, 0,589,760, -,-,-, 342627 Satellite W-chromosome 585 chr25_NT_463200v1_random 7276 8397 GGXHOI 402 - 7276 8397 0 2 468,598, 0,523, -,-, 342630 Satellite W-chromosome 585 chr25_NT_463201v1_random 3002 3703 CR1-C4 230 + 3002 3703 0 2 293,328, 0,373, +,+, 342638 LINE CR1 585 chr25_NT_463201v1_random 10908 11394 GGLTR3F1 889 + 10908 11394 0 2 231,202, 0,284, +,+, 342642 LTR ERVL 585 chr25_NT_463202v1_random 269 948 CR1-C4 190 - 269 948 0 2 316,287, 0,392, -,-, 342647 LINE CR1 585 chr25_NT_463202v1_random 9482 12391 GGXHOI 410 + 9482 12391 0 3 471,1687,703, 0,502,2206, +,+,+, 342652 Satellite W-chromosome 585 chr25_NT_463204v1_random 2967 6909 GGXHOI 435 + 2967 6909 0 3 1382,1023,1461, 0,1406,2481, +,+,+, 342669 Satellite W-chromosome 585 chr25_NT_463204v1_random 7023 7724 CR1-C4 229 - 7023 7724 0 2 328,293, 0,408, -,-, 342670 LINE CR1 585 chr25_NT_463205v1_random 9867 10567 CR1-C4 213 + 9867 10567 0 2 290,328, 0,372, +,+, 342681 LINE CR1 585 chr25_NT_463205v1_random 10952 13190 GGXHOI 457 - 10952 13190 0 2 509,1709, 0,529, -,-, 342683 Satellite W-chromosome 585 chr25_NT_463206v1_random 7156 7857 CR1-C4 224 + 7156 7857 0 2 293,328, 0,373, +,+, 342689 LINE CR1 585 chr25_NT_463206v1_random 7976 11596 GGXHOI 453 - 7976 11596 0 3 114,614,2854, 0,136,766, -,-,-, 342690 Satellite W-chromosome 585 chr25_NT_463206v1_random 13149 14375 GGXHOI 366 - 13149 14375 0 2 166,1043, 0,183, -,-, 342693 Satellite W-chromosome 585 chr25_NT_463208v1_random 3261 3961 CR1-C4 224 + 3261 3961 0 2 292,328, 0,372, +,+, 342713 LINE CR1 585 chr25_NT_463208v1_random 4075 5606 GGXHOI 389 - 4075 5606 0 2 1029,480, 0,1051, -,-, 342714 Satellite W-chromosome 585 chr25_NT_463208v1_random 13499 13982 CR1-C4 570 + 13499 13982 0 2 164,112, 0,371, +,+, 342718 LINE CR1 585 chr25_NT_463209v1_random 7076 7777 CR1-C4 226 + 7076 7777 0 2 293,328, 0,373, +,+, 342726 LINE CR1 585 chr25_NT_463210v1_random 8751 8827 (G)n 890 + 8751 8827 0 2 19,19, 0,57, +,+, 342737 Simple_repeat Simple_repeat 585 chr25_NT_463211v1_random 5836 6056 (CTCTATGGGG)n 453 - 5836 6056 0 2 79,117, 0,103, -,-, 342745 Satellite Satellite 585 chr25_NT_463211v1_random 7963 8373 (CTGTG)n 406 + 7963 8373 0 2 146,74, 0,336, +,+, 342751 Simple_repeat Simple_repeat 585 chr25_NT_463211v1_random 8436 8752 (CTGTG)n 258 + 8436 8752 0 2 108,38, 0,278, +,+, 342754 Simple_repeat Simple_repeat 585 chr25_NT_463214v1_random 4927 5586 CR1-C4 216 + 4927 5586 0 2 254,325, 0,334, +,+, 342778 LINE CR1 585 chr25_NT_463214v1_random 5704 6586 GGXHOI 390 - 5704 6586 0 3 554,166,125, 0,570,757, -,-,-, 342779 Satellite W-chromosome 585 chr25_NT_463216v1_random 10108 10809 CR1-C4 233 + 10108 10809 0 2 293,328, 0,373, +,+, 342797 LINE CR1 585 chr25_NT_463217v1_random 4357 7073 GGXHOI 403 + 4357 7073 0 3 466,1045,1160, 0,495,1556, +,+,+, 342801 Satellite W-chromosome 585 chr25_NT_463217v1_random 7803 10637 GGXHOI 430 + 7803 10637 0 2 894,1921, 0,913, +,+, 342802 Satellite W-chromosome 585 chr25_NT_463217v1_random 10742 11277 CR1-C4 447 - 10742 11277 0 2 327,136, 0,399, -,-, 342803 LINE CR1 585 chr25_NT_463218v1_random 292 999 CR1-C4 181 + 292 999 0 2 296,328, 0,379, +,+, 342805 LINE CR1 585 chr25_NT_463218v1_random 1249 2365 GGXHOI 438 - 1249 2365 0 2 437,616, 0,500, -,-, 342806 Satellite W-chromosome 585 chr25_NT_463218v1_random 8154 8640 GGLTR3F1 899 + 8154 8640 0 2 231,202, 0,284, +,+, 342808 LTR ERVL 585 chr25_NT_463219v1_random 3636 5060 GGXHOI 456 - 3636 5060 0 2 819,585, 0,839, -,-, 342817 Satellite W-chromosome 585 chr25_NT_463220v1_random 2891 3592 CR1-C4 230 + 2891 3592 0 2 293,328, 0,373, +,+, 342822 LINE CR1 585 chr25_NT_463221v1_random 2770 3628 GGXHOI 341 + 2770 3628 0 2 639,200, 0,658, +,+, 342827 Satellite W-chromosome 585 chr25_NT_463221v1_random 4437 5119 CR1-C4 140 - 4437 5119 0 2 337,263, 0,419, -,-, 342830 LINE CR1 585 chr25_NT_463225v1_random 6284 6982 CR1-C4 209 + 6284 6982 0 2 288,328, 0,370, +,+, 342841 LINE CR1 585 chr25_NT_463225v1_random 7090 8403 GGXHOI 420 - 7090 8403 0 2 855,443, 0,870, -,-, 342842 Satellite W-chromosome 585 chr25_NT_463226v1_random 6663 6931 CR1-C4 546 + 6663 6931 0 2 210,47, 0,221, +,+, 342848 LINE CR1 585 chr25_NT_463227v1_random 7091 7669 CR1-C4 186 + 7091 7669 0 2 294,204, 0,374, +,+, 342854 LINE CR1 585 chr25_NT_463233v1_random 5287 5987 CR1-C4 228 + 5287 5987 0 2 292,328, 0,372, +,+, 342879 LINE CR1 585 chr25_NT_463248v1_random 447 552 CR1-C4 664 - 447 552 0 2 53,52, 0,53, -,-, 342949 LINE CR1 585 chr25_NT_463251v1_random 1686 2132 (ACCCATTGGG)n 243 + 1686 2132 0 3 141,103,107, 0,199,339, +,+,+, 342962 Satellite Satellite 585 chr25_NT_463253v1_random 849 1236 (CAGGC)n 542 + 849 1236 0 2 117,95, 0,292, +,+, 342974 Simple_repeat Simple_repeat 585 chr25_NT_463253v1_random 1222 2144 (CAAGG)n 643 + 1222 2144 0 3 205,343,182, 0,385,740, +,+,+, 342976 Simple_repeat Simple_repeat 585 chr25_NT_463253v1_random 2276 2789 (CAAGG)n 602 + 2276 2789 0 2 259,80, 0,433, +,+, 342979 Simple_repeat Simple_repeat 585 chr25_NT_463253v1_random 3100 4713 (CAAGG)n 661 + 3100 4713 0 6 191,187,53,233,13,104, 0,235,739,809,1219,1509, +,+,+,+,+,+, 342984 Simple_repeat Simple_repeat 585 chr25_NT_463262v1_random 1196 1885 (CAAGG)n 705 + 1196 1885 0 3 204,225,85, 0,204,604, +,+,+, 343018 Simple_repeat Simple_repeat 585 chr25_NT_463262v1_random 1999 3064 (CAAGG)n 583 + 1999 3064 0 4 103,100,247,62, 0,276,387,1003, +,+,+,+, 343021 Simple_repeat Simple_repeat 585 chr25_NT_463267v1_random 1244 2005 (CAAGG)n 558 + 1244 2005 0 3 213,147,227, 0,213,534, +,+,+, 343035 Simple_repeat Simple_repeat 585 chr25_NT_463273v1_random 585 1220 CR1-B2 444 + 585 1220 0 2 62,539, 0,96, +,+, 343054 LINE CR1 585 chr25_NT_463280v1_random 3085 4781 GGERVL18-int 409 - 3085 4781 0 3 1116,287,270, 0,1116,1426, -,-,-, 343068 LTR ERVL 585 chr26 91466 91557 (CCCCAT)n 392 + 91466 91557 0 2 7,6, 0,85, +,+, 343135 Simple_repeat Simple_repeat 586 chr26 183993 184084 (A)n 751 + 183993 184084 0 2 44,27, 0,64, +,+, 343183 Simple_repeat Simple_repeat 586 chr26 249925 250273 CR1-X2 324 + 249925 250273 0 2 266,68, 0,280, +,+, 343217 LINE CR1 587 chr26 310772 310877 (CTGCACC)n 364 + 310772 310877 0 2 17,23, 0,82, +,+, 343243 Simple_repeat Simple_repeat 587 chr26 311338 311652 CR1-F2 220 + 311338 311652 0 2 169,122, 0,192, +,+, 343245 LINE CR1 587 chr26 355203 355463 CR1-D2 0 + 355203 355463 0 2 14,154, 0,106, +,+, 343269 LINE CR1 589 chr26 535250 535297 (CCCT)n 470 + 535250 535297 0 2 12,12, 0,35, +,+, 343355 Simple_repeat Simple_repeat 590 chr26 698609 699092 CR1-C4 490 + 698609 699092 0 2 320,161, 0,322, +,+, 343453 LINE CR1 591 chr26 869459 869659 (GCACCA)n 445 + 869459 869659 0 3 44,44,44, 0,78,156, +,+,+, 343525 Simple_repeat Simple_repeat 591 chr26 870203 870799 (GCACCA)n 434 + 870203 870799 0 8 44,44,44,50,44,44,44,44, 0,78,156,234,318,396,474,552, +,+,+,+,+,+,+,+, 343527 Simple_repeat Simple_repeat 591 chr26 896656 897952 CR1-X1 410 - 896656 897952 0 2 147,350, 0,946, -,-, 343537 LINE CR1 592 chr26 926557 926720 G-rich 532 + 926557 926720 0 2 105,30, 0,133, +,+, 343549 Low_complexity Low_complexity 593 chr26 1067682 1068191 TguLTR5e 298 + 1067682 1068191 0 2 232,253, 0,256, +,+, 343591 LTR ERVL 593 chr26 1081014 1081316 Charlie12_GG 416 + 1081014 1081316 0 2 50,223, 0,79, +,+, 343601 DNA hAT-Charlie 593 chr26 1129592 1129735 (CCCATC)n 368 + 1129592 1129735 0 2 12,34, 0,109, +,+, 343641 Simple_repeat Simple_repeat 593 chr26 1155141 1155265 (TGCGTG)n 300 + 1155141 1155265 0 2 61,11, 0,113, +,+, 343667 Simple_repeat Simple_repeat 594 chr26 1231808 1231912 (GTGCT)n 416 + 1231808 1231912 0 2 21,41, 0,63, +,+, 343733 Simple_repeat Simple_repeat 594 chr26 1276745 1276789 (GCCC)n 442 + 1276745 1276789 0 2 12,7, 0,37, +,+, 343798 Simple_repeat Simple_repeat 594 chr26 1280037 1280103 (CCTCTGC)n 344 + 1280037 1280103 0 2 25,8, 0,58, +,+, 343800 Simple_repeat Simple_repeat 595 chr26 1414418 1414974 CR1-D2 553 - 1414418 1414974 0 2 303,248, 0,308, -,-, 343896 LINE CR1 595 chr26 1415048 1416423 CR1-X1 531 - 1415048 1416423 0 2 93,149, 0,1226, -,-, 343897 LINE CR1 597 chr26 1574838 1575144 CR1-Y4 387 - 1574838 1575144 0 2 172,112, 0,194, -,-, 343964 LINE CR1 597 chr26 1581486 1581735 CR1-D2 396 - 1581486 1581735 0 2 113,136, 0,113, -,-, 343968 LINE CR1 599 chr26 1924554 1929606 CR1-F2 393 - 1924554 1929606 0 2 117,80, 0,4972, -,-, 344142 LINE CR1 600 chr26 2060992 2061325 CR1-F2 476 + 2060992 2061325 0 2 181,77, 0,256, +,+, 344201 LINE CR1 603 chr26 2449377 2449469 (TA)n 801 + 2449377 2449469 0 2 28,46, 0,46, +,+, 344353 Simple_repeat Simple_repeat 605 chr26 2636238 2637634 CR1-C4 478 - 2636238 2637634 0 2 67,142, 0,1254, -,-, 344429 LINE CR1 605 chr26 2721860 2721928 (ATA)n 406 + 2721860 2721928 0 2 10,12, 0,56, +,+, 344451 Simple_repeat Simple_repeat 610 chr26 3296940 3297016 (TATGTA)n 288 + 3296940 3297016 0 2 6,10, 0,66, +,+, 344692 Simple_repeat Simple_repeat 611 chr26 3455521 3455969 (CTGTG)n 522 + 3455521 3455969 0 2 143,90, 0,358, +,+, 344761 Simple_repeat Simple_repeat 611 chr26 3456412 3456773 (CTGTG)n 522 + 3456412 3456773 0 2 165,20, 0,341, +,+, 344766 Simple_repeat Simple_repeat 611 chr26 3480009 3480495 (CAGTG)n 369 + 3480009 3480495 0 2 294,178, 0,308, +,+, 344787 Simple_repeat Simple_repeat 613 chr26 3684571 3684631 (TTGTTT)n 446 + 3684571 3684631 0 2 26,14, 0,46, +,+, 344861 Simple_repeat Simple_repeat 615 chr26 4025073 4026217 CR1-C3 701 - 4025073 4026217 0 2 986,158, 0,986, -,-, 344981 LINE CR1 616 chr26 4176448 4177253 CR1-D2 408 + 4176448 4177253 0 2 666,100, 0,705, +,+, 345063 LINE CR1 618 chr26 4349230 4349520 CR1-C4 567 - 4349230 4349520 0 2 57,73, 0,217, -,-, 345132 LINE CR1 618 chr26 4420352 4420421 GA-rich 550 + 4420352 4420421 0 2 23,17, 0,52, +,+, 345177 Low_complexity Low_complexity 618 chr26 4420834 4421192 Char12Mar1_GG 668 - 4420834 4421192 0 2 270,48, 0,310, -,-, 345183 DNA hAT-Charlie 619 chr26 4516267 4516863 CR1-C4 434 + 4516267 4516863 0 2 413,183, 0,413, +,+, 345245 LINE CR1 620 chr26 4614888 4615200 (CACTG)n 493 + 4614888 4615200 0 2 160,141, 0,171, +,+, 345283 Simple_repeat Simple_repeat 621 chr26 4758933 4759067 G-rich 516 + 4758933 4759067 0 2 39,44, 0,90, +,+, 345326 Low_complexity Low_complexity 621 chr26 4760936 4761079 G-rich 506 + 4760936 4761079 0 2 39,53, 0,90, +,+, 345327 Low_complexity Low_complexity 621 chr26 4808432 4808681 CR1-F2 483 - 4808432 4808681 0 3 80,67,84, 0,87,165, -,-,-, 345358 LINE CR1 621 chr26 4819476 4819776 CR1-D2 630 - 4819476 4819776 0 2 208,92, 0,208, -,-, 345373 LINE CR1 622 chr26 4916995 4917092 CR1-C4 717 - 4916995 4917092 0 2 47,50, 0,47, -,-, 345476 LINE CR1 622 chr26 4965568 4965691 (GGCCCG)n 396 + 4965568 4965691 0 2 22,70, 0,53, +,+, 345506 Simple_repeat Simple_repeat 623 chr26 5070027 5070703 Char12Mar1_GG 491 - 5070027 5070703 0 2 399,106, 0,570, -,-, 345550 DNA hAT-Charlie 623 chr26 5071640 5072040 GGLTR3D 586 - 5071640 5072040 0 2 213,187, 0,213, -,-, 345553 LTR ERVL 623 chr26 5095982 5096732 CR1-C4 621 - 5095982 5096732 0 2 650,45, 0,705, -,-, 345563 LINE CR1 625 chr26 5254837 5258390 CR1-F 924 - 5254837 5258390 0 2 3215,338, 0,3215, -,-, 345658 LINE CR1 625 chr26 5258896 5261633 CR1-X1 433 - 5258896 5261633 0 2 186,209, 0,2528, -,-, 345659 LINE CR1 585 chr26_NT_463292v1_random 6054 7258 (CAAGG)n 617 + 6054 7258 0 3 258,116,423, 0,625,781, +,+,+, 345733 Simple_repeat Simple_repeat 585 chr26_NT_463292v1_random 6312 6891 (CAGGC)n 506 + 6312 6891 0 2 367,212, 0,367, +,+, 345734 Simple_repeat Simple_repeat 585 chr26_NT_463292v1_random 7418 8417 (CAAGG)n 667 + 7418 8417 0 4 364,153,46,214, 0,401,739,785, +,+,+,+, 345736 Simple_repeat Simple_repeat 585 chr26_NT_463292v1_random 9154 10348 (CAAGG)n 618 + 9154 10348 0 3 290,217,511, 0,466,683, +,+,+, 345743 Simple_repeat Simple_repeat 585 chr26_NT_463293v1_random 3829 4114 (GCTGGT)n 481 + 3829 4114 0 4 45,44,44,50, 0,79,157,235, +,+,+,+, 345749 Simple_repeat Simple_repeat 585 chr26_NT_463293v1_random 4878 5000 (GCTGGT)n 428 + 4878 5000 0 2 44,44, 0,78, +,+, 345751 Simple_repeat Simple_repeat 585 chr26_NT_463296v1_random 5818 6023 (GCACCA)n 403 + 5818 6023 0 3 44,44,49, 0,78,156, +,+,+, 345762 Simple_repeat Simple_repeat 585 chr27 2011 2449 GGLTR11 587 - 2011 2449 0 2 133,58, 0,380, -,-, 345825 LTR ERV1 585 chr27 13185 15983 CR1-Y2_Aves 175 - 13185 15983 0 4 616,382,153,423, 0,653,1753,2375, -,-,-,-, 345840 LINE CR1 585 chr27 16465 16848 GGERVL-A-int 235 + 16465 16848 0 2 238,94, 0,289, +,+, 345845 LTR ERVL 585 chr27 18180 18630 CR1-Y2_Aves 485 + 18180 18630 0 2 111,149, 0,301, +,+, 345849 LINE CR1 585 chr27 22227 23139 GGLTR8B 223 - 22227 23139 0 2 195,639, 0,273, -,-, 345853 LTR ERVL 585 chr27 28009 28183 CR1-Y3 577 - 28009 28183 0 2 61,113, 0,61, -,-, 345862 LINE CR1 585 chr27 38295 38866 GGLTR11 579 + 38295 38866 0 2 58,133, 0,438, +,+, 345874 LTR ERV1 585 chr27 42776 43845 CR1-Y3 565 - 42776 43845 0 3 63,61,113, 0,895,956, -,-,-, 345880 LINE CR1 585 chr27 51823 52396 GGLTR11 571 + 51823 52396 0 2 58,133, 0,440, +,+, 345890 LTR ERV1 585 chr27 56485 56673 CR1-Y3 578 - 56485 56673 0 2 77,111, 0,77, -,-, 345898 LINE CR1 585 chr27 57683 57873 Sat-CR1_GG 92 + 57683 57873 0 2 25,42, 0,148, +,+, 345900 Satellite Satellite 585 chr27 61000 64492 GGLTR10C2 531 + 61000 64492 0 3 376,2740,376, 0,376,3116, +,+,+, 345903 LTR ERVK 585 chr27 65927 66101 CR1-Y3 577 - 65927 66101 0 2 61,113, 0,61, -,-, 345907 LINE CR1 585 chr27 70876 74521 GGERV28_I-int 178 + 70876 74521 0 3 1414,1772,117, 0,1730,3528, +,+,+, 345913 LTR ERVK 585 chr27 74759 75627 GGLTR7A 794 + 74759 75627 0 4 42,192,262,350, 0,42,256,518, +,+,+,+, 345914 LTR ERV1 585 chr27 81662 82573 GGLTR3C1 629 - 81662 82573 0 2 411,134, 0,777, -,-, 345922 LTR ERVL 585 chr27 82574 96152 GGERVL-C-int 515 + 82574 96152 0 3 1424,85,1629, 0,2194,11949, +,+,+, 345924 LTR ERVL 585 chr27 84001 84768 GGLTR3E3 747 + 84001 84768 0 2 64,444, 0,323, +,+, 345925 LTR ERVL 585 chr27 85133 88455 CR1-G 611 + 85133 88455 0 2 2103,475, 0,2847, +,+, 345928 LINE CR1 585 chr27 88455 92666 GGLTR3B1 695 + 88455 92666 0 2 494,3717, 0,494, +,+, 345929 LTR ERVL 585 chr27 103814 104382 GGERVK10-int 423 - 103814 104382 0 3 63,136,86, 0,216,482, -,-,-, 345933 LTR ERVK 585 chr27 107006 111148 GGERVL18-int 838 - 107006 111148 0 2 861,3273, 0,869, -,-, 345935 LTR ERVL 585 chr27 111117 119930 CR1-F 899 - 111117 119930 0 3 241,854,1389, 0,241,7424, -,-,-, 345936 LINE CR1 585 chr27 112212 118010 GGLTR3F1 882 + 112212 118010 0 2 495,5302, 0,496, +,+, 345937 LTR ERVL 585 chr27 118010 118541 GGLTR3F1 916 + 118010 118541 0 2 36,495, 0,36, +,+, 345938 LTR ERVL 585 chr27 119930 123424 GGERV28_LTR 832 + 119930 123424 0 4 390,90,736,1162, 0,978,1068,2332, +,+,+,+, 345939 LTR ERVK 585 chr27 123427 129204 GGERVL-B-int 839 + 123427 129204 0 2 479,5296, 0,481, +,+, 345942 LTR ERVL 585 chr27 129204 129720 GGLTR3F2 882 + 129204 129720 0 3 36,230,201, 0,36,315, +,+,+, 345943 LTR ERVL 73 chr27 129720 131347 GGERVL-A-int 783 + 129720 131347 0 2 303,1004, 0,623, +,+, 345945 LTR ERVL 585 chr27 130017 130343 GGERV10_LTR 655 + 130017 130343 0 2 65,160, 0,166, +,+, 345946 LTR ERVL 586 chr27 131350 133911 GGERVL-B-int 719 + 131350 133911 0 5 257,657,103,258,594, 0,867,1584,1709,1967, +,+,+,+,+, 345947 LTR ERVL 586 chr27 135197 136735 GGLTR7-int 626 - 135197 136735 0 3 546,196,412, 0,547,1126, -,-,-, 345953 LTR ERV1 586 chr27 141797 142428 GGLTR7-int 272 + 141797 142428 0 2 184,127, 0,504, +,+, 345959 LTR ERV1 586 chr27 146764 152582 GGLTR3F1 810 - 146764 152582 0 2 5317,499, 0,5319, -,-, 345965 LTR ERVL 586 chr27 155125 155363 GGLTR5A 528 + 155125 155363 0 2 168,70, 0,168, +,+, 345970 LTR ERVL 586 chr27 248141 253051 CR1-C4 595 + 248141 253051 0 2 425,456, 0,4454, +,+, 346022 LINE CR1 587 chr27 263099 265527 CR1-C3 633 + 263099 265527 0 3 190,166,151, 0,2111,2277, +,+,+, 346032 LINE CR1 587 chr27 264017 264241 Mariner1b_GG 634 - 264017 264241 0 2 140,84, 0,140, -,-, 346035 DNA TcMar-Mariner 587 chr27 274909 276493 CR1-C3 619 - 274909 276493 0 2 329,1253, 0,331, -,-, 346046 LINE CR1 587 chr27 285863 286867 GGLTR7-int 270 - 285863 286867 0 3 155,194,120, 0,519,884, -,-,-, 346059 LTR ERV1 587 chr27 287207 287906 GGLTR7-int 273 - 287207 287906 0 2 232,122, 0,577, -,-, 346061 LTR ERV1 587 chr27 301634 303284 CR1-C3 633 - 301634 303284 0 2 344,1304, 0,346, -,-, 346074 LINE CR1 587 chr27 305618 309785 GGERVL-B-int 809 + 305618 309785 0 3 152,3522,493, 0,152,3674, +,+,+, 346077 LTR ERVL 587 chr27 331656 332371 GGLTR7-int 349 - 331656 332371 0 3 116,194,120, 0,229,595, -,-,-, 346096 LTR ERV1 587 chr27 336038 337170 GGLTR7-int 282 - 336038 337170 0 2 155,194, 0,938, -,-, 346104 LTR ERV1 587 chr27 337801 338508 GGLTR7-int 259 - 337801 338508 0 2 234,128, 0,579, -,-, 346107 LTR ERV1 587 chr27 349816 350963 GGLTR7-int 330 - 349816 350963 0 2 93,194, 0,953, -,-, 346119 LTR ERV1 587 chr27 351539 352216 GGLTR7-int 292 - 351539 352216 0 2 204,128, 0,549, -,-, 346123 LTR ERV1 588 chr27 395273 396400 GGLTR7-int 359 - 395273 396400 0 3 155,116,194, 0,705,933, -,-,-, 346165 LTR ERV1 588 chr27 397046 397713 GGLTR7-int 277 - 397046 397713 0 2 204,122, 0,545, -,-, 346168 LTR ERV1 588 chr27 410551 412302 CR1-C3 622 - 410551 412302 0 2 441,1308, 0,443, -,-, 346184 LINE CR1 588 chr27 415694 417104 GGLTR7-int 271 - 415694 417104 0 2 155,120, 0,1290, -,-, 346190 LTR ERV1 588 chr27 417474 418145 GGLTR7-int 285 - 417474 418145 0 2 204,122, 0,549, -,-, 346195 LTR ERV1 588 chr27 424172 427854 CR1-X2 624 + 424172 427854 0 2 462,2671, 0,1011, +,+, 346202 LINE CR1 588 chr27 431566 432256 CR1-Y4 493 - 431566 432256 0 2 198,483, 0,207, -,-, 346208 LINE CR1 588 chr27 437253 437452 G-rich 328 + 437253 437452 0 2 36,51, 0,148, +,+, 346211 Low_complexity Low_complexity 588 chr27 442979 444756 CR1-Y3 472 - 442979 444756 0 2 387,483, 0,1294, -,-, 346219 LINE CR1 588 chr27 451224 452911 CR1-Y3 486 - 451224 452911 0 3 119,167,483, 0,130,1204, -,-,-, 346224 LINE CR1 588 chr27 459406 460601 CR1-Y4 548 - 459406 460601 0 2 130,167, 0,1028, -,-, 346231 LINE CR1 588 chr27 467762 469525 CR1-Y3 464 - 467762 469525 0 2 387,483, 0,1280, -,-, 346238 LINE CR1 588 chr27 480680 482457 CR1-Y3 466 - 480680 482457 0 2 387,483, 0,1294, -,-, 346248 LINE CR1 588 chr27 488901 490894 CR1-Y3 475 - 488901 490894 0 2 387,483, 0,1510, -,-, 346256 LINE CR1 588 chr27 494740 495791 CR1-Y1_Aves 380 + 494740 495791 0 2 119,199, 0,852, +,+, 346260 LINE CR1 588 chr27 495789 497014 CR1-X 374 - 495789 497014 0 2 1117,108, 0,1117, -,-, 346262 LINE CR1 588 chr27 497937 498558 GGLTR5A 90 + 497937 498558 0 2 392,194, 0,427, +,+, 346266 LTR ERVL 588 chr27 512666 515216 CR1-C4 517 - 512666 515216 0 2 630,818, 0,1732, -,-, 346273 LINE CR1 589 chr27 554401 555245 CR1-C4 556 - 554401 555245 0 2 404,440, 0,404, -,-, 346300 LINE CR1 589 chr27 595666 596250 CR1-Y2_Aves 198 - 595666 596250 0 2 160,315, 0,269, -,-, 346321 LINE CR1 589 chr27 628564 629140 CR1-Y2_Aves 203 - 628564 629140 0 2 160,315, 0,261, -,-, 346336 LINE CR1 589 chr27 643149 643201 (CTTT)n 508 + 643149 643201 0 2 11,9, 0,43, +,+, 346347 Simple_repeat Simple_repeat 590 chr27 662853 663417 CR1-Y2_Aves 188 - 662853 663417 0 2 156,315, 0,249, -,-, 346357 LINE CR1 590 chr27 677359 678491 CR1-G 275 + 677359 678491 0 2 466,79, 0,1053, +,+, 346372 LINE CR1 590 chr27 688722 689286 CR1-Y2_Aves 188 - 688722 689286 0 2 156,315, 0,249, -,-, 346373 LINE CR1 590 chr27 702570 703142 CR1-Y2_Aves 198 - 702570 703142 0 2 160,315, 0,257, -,-, 346380 LINE CR1 590 chr27 722394 722453 (CTTT)n 420 + 722394 722453 0 2 11,9, 0,50, +,+, 346391 Simple_repeat Simple_repeat 590 chr27 731372 732216 CR1-C4 561 - 731372 732216 0 2 404,440, 0,404, -,-, 346395 LINE CR1 591 chr27 850490 851211 CR1-Y2_Aves 88 - 850490 851211 0 2 212,483, 0,238, -,-, 346469 LINE CR1 591 chr27 867205 867794 CR1-F0 931 - 867205 867794 0 2 163,418, 0,171, -,-, 346476 LINE CR1 591 chr27 899616 899970 CR1-C4 508 - 899616 899970 0 2 127,227, 0,127, -,-, 346492 LINE CR1 591 chr27 903759 905208 CR1-Y4 381 + 903759 905208 0 2 120,392, 0,1057, +,+, 346494 LINE CR1 592 chr27 943329 944402 CR1-C4 463 - 943329 944402 0 2 629,444, 0,629, -,-, 346517 LINE CR1 592 chr27 953392 956669 CR1-F2 393 - 953392 956669 0 3 125,2139,406, 0,732,2871, -,-,-, 346524 LINE CR1 592 chr27 960539 966149 CR1-X2 484 + 960539 966149 0 2 534,185, 0,5425, +,+, 346526 LINE CR1 592 chr27 970924 971714 CR1-Y2_Aves 173 - 970924 971714 0 2 388,356, 0,434, -,-, 346532 LINE CR1 592 chr27 982218 984203 GGERV20_I-int 243 - 982218 984203 0 2 656,1305, 0,680, -,-, 346541 LTR ERVL 592 chr27 984959 986065 CR1-C4 534 - 984959 986065 0 2 580,526, 0,580, -,-, 346543 LINE CR1 592 chr27 988061 988624 CR1-Y4 611 - 988061 988624 0 2 55,487, 0,76, -,-, 346545 LINE CR1 592 chr27 994580 995150 CR1-Y4 620 - 994580 995150 0 2 55,494, 0,76, -,-, 346548 LINE CR1 592 chr27 1001108 1001676 CR1-Y4 623 - 1001108 1001676 0 2 55,492, 0,76, -,-, 346551 LINE CR1 592 chr27 1007638 1008208 CR1-Y4 619 - 1007638 1008208 0 2 55,494, 0,76, -,-, 346554 LINE CR1 592 chr27 1026325 1026760 CR1-E 312 + 1026325 1026760 0 2 345,88, 0,347, +,+, 346564 LINE CR1 592 chr27 1027215 1027469 CR1-C4 609 + 1027215 1027469 0 2 119,85, 0,169, +,+, 346565 LINE CR1 593 chr27 1060625 1061099 CR1-Y2_Aves 357 + 1060625 1061099 0 2 217,71, 0,403, +,+, 346595 LINE CR1 74 chr27 1179086 1180318 TguLTR5e 273 - 1179086 1180318 0 2 53,136, 0,1096, -,-, 346614 LTR ERVL 594 chr27 1180345 1180882 ENS1-LTR 540 + 1180345 1180882 0 2 350,149, 0,388, +,+, 346617 LTR ERVL 594 chr27 1189774 1190442 ENS1-LTR 840 + 1189774 1190442 0 2 450,218, 0,450, +,+, 346624 LTR ERVL 594 chr27 1205126 1209248 CR1-X2 291 + 1205126 1209248 0 3 889,260,267, 0,2865,3855, +,+,+, 346633 LINE CR1 594 chr27 1211015 1211913 CR1-D2 571 - 1211015 1211913 0 2 149,749, 0,149, -,-, 346637 LINE CR1 594 chr27 1212721 1213818 Char12Mar1_GG 459 - 1212721 1213818 0 2 271,237, 0,860, -,-, 346638 DNA hAT-Charlie 594 chr27 1224026 1227816 CR1-E 738 + 1224026 1227816 0 2 164,2570, 0,1220, +,+, 346647 LINE CR1 594 chr27 1237669 1240065 CR1-E 623 - 1237669 1240065 0 2 120,110, 0,2286, -,-, 346651 LINE CR1 594 chr27 1246975 1247548 CR1-C4 526 - 1246975 1247548 0 2 70,503, 0,70, -,-, 346663 LINE CR1 594 chr27 1247654 1248781 CR1-F2 566 + 1247654 1248781 0 2 318,664, 0,463, +,+, 346664 LINE CR1 594 chr27 1264863 1264916 (TTTCT)n 450 + 1264863 1264916 0 2 17,7, 0,46, +,+, 346679 Simple_repeat Simple_repeat 594 chr27 1275260 1275625 Char12Mar1_GG 651 - 1275260 1275625 0 2 117,248, 0,117, -,-, 346692 DNA hAT-Charlie 594 chr27 1283433 1283950 (CCCTAA)n 673 + 1283433 1283950 0 2 186,293, 0,224, +,+, 346700 Simple_repeat Simple_repeat 595 chr27 1316941 1317790 CR1-Y2_Aves 319 + 1316941 1317790 0 2 341,87, 0,762, +,+, 346740 LINE CR1 595 chr27 1341456 1342204 CR1-Y4 279 - 1341456 1342204 0 2 312,156, 0,592, -,-, 346749 LINE CR1 595 chr27 1343317 1343845 CR1-D2 621 + 1343317 1343845 0 2 328,199, 0,329, +,+, 346754 LINE CR1 595 chr27 1358992 1359438 CR1-Y2_Aves 318 + 1358992 1359438 0 2 186,183, 0,263, +,+, 346764 LINE CR1 595 chr27 1367993 1368362 CR1-F2 525 - 1367993 1368362 0 2 86,283, 0,86, -,-, 346770 LINE CR1 595 chr27 1372744 1373379 CR1-Y4 570 + 1372744 1373379 0 2 325,303, 0,332, +,+, 346774 LINE CR1 595 chr27 1375121 1375846 CR1-F2 447 + 1375121 1375846 0 2 113,156, 0,569, +,+, 346776 LINE CR1 595 chr27 1398053 1398918 CR1-Y4 472 - 1398053 1398918 0 2 421,444, 0,421, -,-, 346783 LINE CR1 596 chr27 1498550 1499146 CR1-C4 338 - 1498550 1499146 0 2 157,439, 0,157, -,-, 346852 LINE CR1 596 chr27 1514635 1515254 (GGATG)n 553 + 1514635 1515254 0 2 330,262, 0,357, +,+, 346864 Simple_repeat Simple_repeat 596 chr27 1536296 1536708 CR1-Y1_Aves 502 - 1536296 1536708 0 2 132,259, 0,153, -,-, 346879 LINE CR1 596 chr27 1548165 1549129 CR1-H 818 + 1548165 1549129 0 2 23,896, 0,68, +,+, 346886 LINE CR1 597 chr27 1580043 1580193 CR1-C4 607 - 1580043 1580193 0 3 53,48,47, 0,53,103, -,-,-, 346903 LINE CR1 597 chr27 1581566 1581657 (AACAC)n 554 + 1581566 1581657 0 2 38,30, 0,61, +,+, 346907 Simple_repeat Simple_repeat 597 chr27 1615304 1615406 CR1-C3 678 - 1615304 1615406 0 2 50,49, 0,53, -,-, 346932 LINE CR1 597 chr27 1618948 1619492 CR1-F2 411 + 1618948 1619492 0 2 277,262, 0,282, +,+, 346936 LINE CR1 597 chr27 1637025 1637090 (TCT)n 296 + 1637025 1637090 0 2 21,14, 0,51, +,+, 346953 Simple_repeat Simple_repeat 597 chr27 1668938 1669396 (TCCA)n 444 + 1668938 1669396 0 2 205,218, 0,240, +,+, 346991 Simple_repeat Simple_repeat 598 chr27 1721091 1721260 (GCC)n 542 + 1721091 1721260 0 2 103,52, 0,117, +,+, 347040 Simple_repeat Simple_repeat 598 chr27 1760684 1761985 CR1-C3 618 + 1760684 1761985 0 2 49,59, 0,1242, +,+, 347084 LINE CR1 598 chr27 1760786 1760886 CR1-C3 613 + 1760786 1760886 0 2 49,49, 0,51, +,+, 347085 LINE CR1 598 chr27 1761732 1761918 (CCAAC)n 506 + 1761732 1761918 0 2 124,30, 0,156, +,+, 347087 Simple_repeat Simple_repeat 598 chr27 1786914 1787413 (CCCCAG)n 395 + 1786914 1787413 0 2 186,256, 0,243, +,+, 347100 Simple_repeat Simple_repeat 598 chr27 1788213 1788359 CR1-C3 642 - 1788213 1788359 0 3 47,50,49, 0,47,97, -,-,-, 347104 LINE CR1 599 chr27 1859636 1859833 CR1-C4 583 + 1859636 1859833 0 2 144,53, 0,144, +,+, 347157 LINE CR1 599 chr27 1905605 1915129 CR1-F0 514 - 1905605 1915129 0 2 172,108, 0,9416, -,-, 347184 LINE CR1 600 chr27 1978342 1978600 CR1-C3 648 - 1978342 1978600 0 5 54,51,51,48,52, 0,54,105,156,206, -,-,-,-,-, 347231 LINE CR1 600 chr27 1985589 1985688 CR1-B 670 - 1985589 1985688 0 2 45,51, 0,48, -,-, 347236 LINE CR1 600 chr27 1985685 1985787 CR1-C3 699 - 1985685 1985787 0 2 54,48, 0,54, -,-, 347237 LINE CR1 601 chr27 2199288 2199619 CR1-B2 762 + 2199288 2199619 0 2 248,83, 0,248, +,+, 347347 LINE CR1 602 chr27 2243954 2244346 CR1-H2 524 + 2243954 2244346 0 2 262,119, 0,273, +,+, 347361 LINE CR1 603 chr27 2383365 2384362 CR1-L3B_Croc 147 + 2383365 2384362 0 2 385,307, 0,690, +,+, 347425 LINE CR1 604 chr27 2500708 2501520 CR1-F2 578 - 2500708 2501520 0 2 126,675, 0,137, -,-, 347474 LINE CR1 604 chr27 2503217 2503572 CR1-X2 422 + 2503217 2503572 0 2 233,100, 0,255, +,+, 347476 LINE CR1 604 chr27 2578672 2579438 CR1-C2 464 - 2578672 2579438 0 2 108,126, 0,640, -,-, 347507 LINE CR1 605 chr27 2659711 2659870 G-rich 432 + 2659711 2659870 0 2 92,43, 0,116, +,+, 347552 Low_complexity Low_complexity 605 chr27 2687219 2689514 CR1-C3 424 - 2687219 2689514 0 2 114,578, 0,1717, -,-, 347569 LINE CR1 605 chr27 2699370 2701681 CR1-C3 429 - 2699370 2701681 0 2 84,576, 0,1735, -,-, 347579 LINE CR1 605 chr27 2716718 2716999 CR1-B2 498 - 2716718 2716999 0 2 33,144, 0,137, -,-, 347590 LINE CR1 605 chr27 2719264 2719779 CR1-C2 767 + 2719264 2719779 0 3 127,211,176, 0,127,339, +,+,+, 347595 LINE CR1 605 chr27 2722706 2723581 CR1-H2 534 + 2722706 2723581 0 2 30,681, 0,194, +,+, 347598 LINE CR1 606 chr27 2756358 2758975 CR1-F2 440 - 2756358 2758975 0 2 204,118, 0,2499, -,-, 347625 LINE CR1 606 chr27 2763314 2764233 (CCTAA)n 684 + 2763314 2764233 0 3 279,16,258, 0,473,661, +,+,+, 347631 Simple_repeat Simple_repeat 606 chr27 2787210 2787366 CR1-F 548 - 2787210 2787366 0 2 66,89, 0,67, -,-, 347646 LINE CR1 606 chr27 2803987 2804432 CR1-C4 497 - 2803987 2804432 0 2 64,237, 0,208, -,-, 347657 LINE CR1 606 chr27 2803996 2804096 CR1-B2 622 - 2803996 2804096 0 2 58,42, 0,58, -,-, 347658 LINE CR1 606 chr27 2854653 2854748 (CCT)n 564 + 2854653 2854748 0 2 13,15, 0,80, +,+, 347693 Simple_repeat Simple_repeat 607 chr27 2904054 2904654 CR1-11_Crp 249 + 2904054 2904654 0 2 275,244, 0,356, +,+, 347715 LINE CR1 609 chr27 3184485 3184892 (CAGCC)n 529 + 3184485 3184892 0 2 181,200, 0,207, +,+, 347849 Simple_repeat Simple_repeat 609 chr27 3212536 3212587 (CCCCATC)n 540 + 3212536 3212587 0 2 8,11, 0,40, +,+, 347901 Simple_repeat Simple_repeat 610 chr27 3283225 3283688 CR1-F2 388 - 3283225 3283688 0 2 229,234, 0,229, -,-, 347948 LINE CR1 612 chr27 3622555 3622980 CR1-C4 605 - 3622555 3622980 0 2 370,55, 0,370, -,-, 348097 LINE CR1 612 chr27 3645749 3645802 (TCTT)n 478 + 3645749 3645802 0 2 16,11, 0,42, +,+, 348118 Simple_repeat Simple_repeat 614 chr27 3814667 3814722 (TATA)n 464 + 3814667 3814722 0 2 8,14, 0,41, +,+, 348258 Simple_repeat Simple_repeat 615 chr27 4020004 4020482 (CATCC)n 464 + 4020004 4020482 0 2 198,233, 0,245, +,+, 348453 Simple_repeat Simple_repeat 615 chr27 4037308 4037362 (TTTTTG)n 676 + 4037308 4037362 0 2 9,11, 0,43, +,+, 348476 Simple_repeat Simple_repeat 616 chr27 4082475 4082540 (GCGCT)n 352 + 4082475 4082540 0 2 23,11, 0,54, +,+, 348502 Simple_repeat Simple_repeat 616 chr27 4158300 4158375 (TGGTTG)n 374 + 4158300 4158375 0 2 18,7, 0,68, +,+, 348560 Simple_repeat Simple_repeat 617 chr27 4211932 4212010 (CCCCGG)n 364 + 4211932 4212010 0 2 44,9, 0,69, +,+, 348606 Simple_repeat Simple_repeat 618 chr27 4345985 4346275 CR1-E 625 + 4345985 4346275 0 2 49,55, 0,235, +,+, 348762 LINE CR1 620 chr27 4600748 4601071 (CACAG)n 597 + 4600748 4601071 0 2 167,156, 0,167, +,+, 348992 Simple_repeat Simple_repeat 620 chr27 4602534 4602761 (TGCACA)n 244 + 4602534 4602761 0 2 117,52, 0,175, +,+, 349005 Simple_repeat Simple_repeat 621 chr27 4731505 4731563 (GGC)n 404 + 4731505 4731563 0 2 8,11, 0,47, +,+, 349123 Simple_repeat Simple_repeat 621 chr27 4764203 4764329 (GCCGC)n 314 + 4764203 4764329 0 2 13,23, 0,103, +,+, 349143 Simple_repeat Simple_repeat 621 chr27 4777516 4777659 (CGCCC)n 314 + 4777516 4777659 0 2 84,9, 0,134, +,+, 349160 Simple_repeat Simple_repeat 621 chr27 4783411 4783503 (CGC)n 358 + 4783411 4783503 0 2 10,6, 0,86, +,+, 349172 Simple_repeat Simple_repeat 621 chr27 4785884 4786147 (TG)n 598 + 4785884 4786147 0 2 34,193, 0,70, +,+, 349179 Simple_repeat Simple_repeat 621 chr27 4786339 4786443 (GT)n 666 + 4786339 4786443 0 2 48,30, 0,74, +,+, 349180 Simple_repeat Simple_repeat 627 chr27 5528287 5528438 G-rich 374 + 5528287 5528438 0 2 48,68, 0,83, +,+, 349517 Low_complexity Low_complexity 627 chr27 5539589 5540088 GGLTR5A 340 + 5539589 5540088 0 2 260,156, 0,343, +,+, 349518 LTR ERVL 627 chr27 5624957 5625850 GGERVL18-LTR 612 - 5624957 5625850 0 2 176,173, 0,720, -,-, 349555 LTR ERVL 627 chr27 5626341 5626991 CR1-D 518 - 5626341 5626991 0 2 365,259, 0,391, -,-, 349558 LINE CR1 585 chr27_NT_463313v1_random 17891 19050 TguLTR5e 243 - 17891 19050 0 2 362,144, 0,1015, -,-, 349595 LTR ERVL 585 chr27_NT_463313v1_random 19083 19764 ENS1-LTR 937 + 19083 19764 0 2 459,222, 0,459, +,+, 349597 LTR ERVL 585 chr27_NT_463313v1_random 28115 29274 TguLTR5e 237 - 28115 29274 0 2 362,144, 0,1015, -,-, 349607 LTR ERVL 585 chr27_NT_463313v1_random 29307 29981 ENS1-LTR 922 + 29307 29981 0 2 452,222, 0,452, +,+, 349609 LTR ERVL 585 chr27_NT_463313v1_random 35914 42430 GGERVL-B-int 799 + 35914 42430 0 4 487,3698,1539,494, 0,489,4483,6022, +,+,+,+, 349615 LTR ERVL 585 chr27_NT_463313v1_random 42459 44444 CR1-C2 651 - 42459 44444 0 2 61,118, 0,1867, -,-, 349617 LINE CR1 585 chr27_NT_463313v1_random 44470 46657 GGERVL-B-int 382 - 44470 46657 0 4 275,418,828,559, 0,375,793,1628, -,-,-,-, 349620 LTR ERVL 585 chr27_NT_463314v1_random 11282 11872 CR1-F0 941 + 11282 11872 0 2 418,163, 0,427, +,+, 349642 LINE CR1 585 chr27_NT_463314v1_random 16488 16842 CR1-C4 512 + 16488 16842 0 2 235,119, 0,235, +,+, 349645 LINE CR1 585 chr27_NT_463314v1_random 33837 34191 CR1-C4 512 + 33837 34191 0 2 235,119, 0,235, +,+, 349656 LINE CR1 585 chr27_NT_463314v1_random 43593 44418 CR1-X2 174 - 43593 44418 0 2 171,423, 0,402, -,-, 349659 LINE CR1 585 chr27_NT_463315v1_random 6341 7414 CR1-C4 467 + 6341 7414 0 2 448,625, 0,448, +,+, 349669 LINE CR1 585 chr27_NT_463315v1_random 19184 19793 CR1-F2 307 - 19184 19793 0 2 45,201, 0,408, -,-, 349674 LINE CR1 585 chr27_NT_463315v1_random 19898 20481 CR1-Y2_Aves 184 + 19898 20481 0 2 345,132, 0,451, +,+, 349676 LINE CR1 585 chr27_NT_463315v1_random 28895 29248 CR1-C4 503 + 28895 29248 0 2 234,119, 0,234, +,+, 349685 LINE CR1 585 chr27_NT_463318v1_random 5960 6533 GGLTR11 471 + 5960 6533 0 2 58,180, 0,393, +,+, 349731 LTR ERV1 585 chr27_NT_463318v1_random 11997 12230 GGLTR5A 552 + 11997 12230 0 2 163,70, 0,163, +,+, 349741 LTR ERVL 585 chr27_NT_463318v1_random 12853 13985 GGERVL-B-int 188 + 12853 13985 0 2 252,694, 0,438, +,+, 349742 LTR ERVL 585 chr27_NT_463319v1_random 8874 9447 GGLTR11 579 + 8874 9447 0 2 58,133, 0,440, +,+, 349763 LTR ERV1 585 chr27_NT_463319v1_random 13552 13726 CR1-Y3 577 - 13552 13726 0 2 61,113, 0,61, -,-, 349771 LINE CR1 585 chr27_NT_463319v1_random 21826 22399 GGLTR11 579 + 21826 22399 0 2 58,133, 0,440, +,+, 349781 LTR ERV1 585 chr27_NT_463320v1_random 2561 3172 CR1-Y2_Aves 130 - 2561 3172 0 2 105,480, 0,131, -,-, 349788 LINE CR1 585 chr27_NT_463322v1_random 395 1172 CR1-F0 844 + 395 1172 0 2 105,533, 0,244, +,+, 349803 LINE CR1 585 chr27_NT_463322v1_random 5831 6189 CR1-C4 486 + 5831 6189 0 2 238,120, 0,238, +,+, 349806 LINE CR1 585 chr27_NT_463324v1_random 12281 13149 CR1-F 850 - 12281 13149 0 2 347,501, 0,367, -,-, 349834 LINE CR1 585 chr27_NT_463326v1_random 144 942 CR1-F2 254 + 144 942 0 2 308,472, 0,326, +,+, 349847 LINE CR1 585 chr27_NT_463328v1_random 8195 8547 CR1-C4 509 + 8195 8547 0 2 234,118, 0,234, +,+, 349870 LINE CR1 585 chr27_NT_463330v1_random 8320 8423 (G)n 903 + 8320 8423 0 2 22,23, 0,80, +,+, 349895 Simple_repeat Simple_repeat 585 chr27_NT_463330v1_random 10007 10395 (GGATG)n 624 + 10007 10395 0 2 184,188, 0,200, +,+, 349899 Simple_repeat Simple_repeat 585 chr27_NT_463330v1_random 10737 10935 G-rich 382 + 10737 10935 0 2 64,96, 0,102, +,+, 349900 Low_complexity Low_complexity 585 chr27_NT_463331v1_random 5602 6132 (GGATG)n 631 + 5602 6132 0 2 176,343, 0,187, +,+, 349914 Simple_repeat Simple_repeat 585 chr27_NT_463331v1_random 6459 6660 G-rich 389 + 6459 6660 0 2 66,97, 0,104, +,+, 349916 Low_complexity Low_complexity 585 chr27_NT_463332v1_random 1936 2021 (TC)n 422 + 1936 2021 0 2 8,36, 0,49, +,+, 349936 Simple_repeat Simple_repeat 585 chr27_NT_463333v1_random 3898 7025 GGLTR10C-int 509 - 3898 7025 0 4 374,442,1888,376, 0,377,863,2751, -,-,-,-, 349953 LTR ERVK 585 chr27_NT_463335v1_random 4581 6694 Mariner1_GG 504 - 4581 6694 0 3 236,85,455, 0,838,1658, -,-,-, 349961 DNA TcMar-Mariner 585 chr27_NT_463335v1_random 7595 8267 GGLTR7-int 303 + 7595 8267 0 2 123,204, 0,468, +,+, 349964 LTR ERV1 585 chr27_NT_463340v1_random 6992 7343 CR1-C4 508 + 6992 7343 0 2 232,119, 0,232, +,+, 349992 LINE CR1 585 chr27_NT_463341v1_random 5076 5567 (ACCCCATAGGG)n 418 + 5076 5567 0 2 264,164, 0,327, +,+, 350000 Satellite Satellite 585 chr27_NT_463341v1_random 5779 6280 (ACCCCATAGGG)n 289 + 5779 6280 0 2 139,324, 0,177, +,+, 350001 Satellite Satellite 585 chr27_NT_463341v1_random 6396 6707 (ACCCCATAGGG)n 342 + 6396 6707 0 2 127,169, 0,142, +,+, 350002 Satellite Satellite 585 chr27_NT_463342v1_random 1160 1512 (CATCC)n 702 + 1160 1512 0 2 127,44, 0,308, +,+, 350008 Simple_repeat Simple_repeat 585 chr27_NT_463344v1_random 1260 1818 GGLTR11 535 - 1260 1818 0 2 133,59, 0,499, -,-, 350023 LTR ERV1 585 chr27_NT_463346v1_random 1729 2374 CR1-E 463 + 1729 2374 0 2 57,570, 0,75, +,+, 350037 LINE CR1 585 chr27_NT_463346v1_random 5593 6213 CR1-Y2_Aves 160 - 5593 6213 0 2 238,274, 0,346, -,-, 350038 LINE CR1 585 chr27_NT_463349v1_random 1105 1278 CR1-Y3 566 - 1105 1278 0 2 61,112, 0,61, -,-, 350048 LINE CR1 585 chr27_NT_463350v1_random 4507 5421 CR1-Y2_Aves 90 + 4507 5421 0 2 353,531, 0,383, +,+, 350055 LINE CR1 585 chr27_NT_463356v1_random 780 1027 (CATGC)n 464 + 780 1027 0 2 42,28, 0,219, +,+, 350078 Simple_repeat Simple_repeat 585 chr27_NT_463356v1_random 3346 3456 G-rich 583 + 3346 3456 0 2 37,40, 0,70, +,+, 350082 Low_complexity Low_complexity 585 chr27_NT_463362v1_random 1831 1981 CR1-C4 607 - 1831 1981 0 3 53,48,47, 0,53,103, -,-,-, 350090 LINE CR1 585 chr27_NT_463370v1_random 266 503 (ACCCCATAGGG)n 461 - 266 503 0 2 79,132, 0,105, -,-, 350110 Satellite Satellite 585 chr28 4333 5604 CR1-H 599 + 4333 5604 0 2 1158,113, 0,1158, +,+, 350120 LINE CR1 585 chr28 7717 8340 CR1-H 670 + 7717 8340 0 2 484,139, 0,484, +,+, 350123 LINE CR1 585 chr28 16545 18396 CR1-F 872 + 16545 18396 0 2 631,1131, 0,720, +,+, 350135 LINE CR1 585 chr28 18396 22692 GGERV10_LTR 909 - 18396 22692 0 5 220,256,3495,158,62, 0,220,476,3972,4234, -,-,-,-,-, 350137 LTR ERVL 585 chr28 54322 56028 CR1-B 851 + 54322 56028 0 2 972,734, 0,972, +,+, 350157 LINE CR1 585 chr28 64140 65804 CR1-B 768 + 64140 65804 0 2 929,735, 0,929, +,+, 350166 LINE CR1 585 chr28 73894 75558 CR1-B 764 + 73894 75558 0 2 929,735, 0,929, +,+, 350175 LINE CR1 585 chr28 88277 89278 CR1-X1 472 - 88277 89278 0 2 147,849, 0,152, -,-, 350184 LINE CR1 585 chr28 97337 98846 CR1-D 550 + 97337 98846 0 2 121,1377, 0,132, +,+, 350190 LINE CR1 585 chr28 110511 114478 CR1-Y4 528 - 110511 114478 0 2 180,75, 0,3892, -,-, 350199 LINE CR1 585 chr28 125309 127773 CR1-8_Crp 302 - 125309 127773 0 2 96,155, 0,2309, -,-, 350209 LINE CR1 586 chr28 134318 135201 CR1-H 346 + 134318 135201 0 2 171,149, 0,734, +,+, 350216 LINE CR1 586 chr28 136926 140791 CR1-C4 516 + 136926 140791 0 2 849,331, 0,3534, +,+, 350218 LINE CR1 586 chr28 148470 156056 GGERVK10-int 821 - 148470 156056 0 4 363,1031,5829,363, 0,363,1394,7223, -,-,-,-, 350224 LTR ERVK 586 chr28 194908 194960 (TTTC)n 516 + 194908 194960 0 2 8,6, 0,46, +,+, 350243 Simple_repeat Simple_repeat 586 chr28 206865 209028 CR1-Y2_Aves 348 + 206865 209028 0 3 139,1416,337, 0,203,1826, +,+,+, 350251 LINE CR1 587 chr28 295724 298548 CR1-Y4 619 + 295724 298548 0 2 322,276, 0,2548, +,+, 350312 LINE CR1 587 chr28 296044 298278 CR1-H 831 + 296044 298278 0 2 520,1377, 0,857, +,+, 350313 LINE CR1 587 chr28 326494 328251 CR1-X 470 + 326494 328251 0 2 846,152, 0,1605, +,+, 350329 LINE CR1 73 chr28 390118 395182 CR1-C4 575 - 390118 395182 0 2 68,142, 0,4922, -,-, 350351 LINE CR1 588 chr28 412597 413231 GGERVL-A-int 338 + 412597 413231 0 2 290,252, 0,382, +,+, 350361 LTR ERVL 588 chr28 438942 440820 CR1-Y 324 + 438942 440820 0 2 648,854, 0,1024, +,+, 350381 LINE CR1 588 chr28 468880 469423 GGLTR8A 470 - 468880 469423 0 2 297,246, 0,297, -,-, 350398 LTR ERVL 588 chr28 469908 471240 CR1-D 599 - 469908 471240 0 2 989,126, 0,1206, -,-, 350400 LINE CR1 73 chr28 523090 528751 CR1-X1 477 - 523090 528751 0 2 240,183, 0,5478, -,-, 350430 LINE CR1 588 chr28 523328 523663 CR1-X1 484 + 523328 523663 0 2 191,144, 0,191, +,+, 350431 LINE CR1 589 chr28 560102 560796 CR1-X1 389 - 560102 560796 0 3 79,393,219, 0,82,475, -,-,-, 350456 LINE CR1 589 chr28 565464 566031 CR1-E 598 + 565464 566031 0 2 51,516, 0,51, +,+, 350461 LINE CR1 589 chr28 590820 591996 CR1-Y3 574 - 590820 591996 0 2 948,228, 0,948, -,-, 350471 LINE CR1 589 chr28 628549 630200 CR1-C4 422 - 628549 630200 0 2 340,1311, 0,340, -,-, 350490 LINE CR1 589 chr28 639248 640339 CR1-C4 485 + 639248 640339 0 2 77,1014, 0,77, +,+, 350494 LINE CR1 589 chr28 643053 643590 CR1-Y2_Aves 275 - 643053 643590 0 3 72,205,233, 0,85,304, -,-,-, 350497 LINE CR1 590 chr28 664953 665012 (CTGCT)n 460 + 664953 665012 0 2 10,11, 0,48, +,+, 350515 Simple_repeat Simple_repeat 590 chr28 683188 684302 CR1-Y4 454 - 683188 684302 0 2 196,916, 0,198, -,-, 350526 LINE CR1 590 chr28 748915 750419 CR1-E 295 - 748915 750419 0 3 349,242,425, 0,349,1079, -,-,-, 350553 LINE CR1 590 chr28 755391 756592 CR1-Y3 81 + 755391 756592 0 2 479,205, 0,996, +,+, 350555 LINE CR1 591 chr28 860791 860851 (CCACTT)n 438 + 860791 860851 0 2 6,14, 0,46, +,+, 350622 Simple_repeat Simple_repeat 591 chr28 877297 877446 CR1-D2 607 + 877297 877446 0 2 81,41, 0,108, +,+, 350634 LINE CR1 592 chr28 933882 934286 CR1-Y2_Aves 411 + 933882 934286 0 2 81,72, 0,332, +,+, 350678 LINE CR1 593 chr28 1090713 1090788 (G)n 947 + 1090713 1090788 0 2 19,20, 0,55, +,+, 350789 Simple_repeat Simple_repeat 593 chr28 1092675 1092935 (ACCCCATAGGG)n 402 - 1092675 1092935 0 2 107,110, 0,150, -,-, 350798 Satellite Satellite 593 chr28 1112631 1112897 (CACAG)n 437 + 1112631 1112897 0 2 37,195, 0,71, +,+, 350838 Simple_repeat Simple_repeat 593 chr28 1148471 1149098 (CCCTAA)n 683 + 1148471 1149098 0 3 194,191,192, 0,216,435, +,+,+, 350889 Simple_repeat Simple_repeat 593 chr28 1151534 1152662 (CATCC)n 676 + 1151534 1152662 0 4 44,224,464,325, 0,47,306,803, +,+,+,+, 350900 Simple_repeat Simple_repeat 593 chr28 1168796 1169111 CR1-C4 429 + 1168796 1169111 0 2 213,102, 0,213, +,+, 350924 LINE CR1 594 chr28 1207502 1207556 (GCG)n 460 + 1207502 1207556 0 2 11,19, 0,35, +,+, 350948 Simple_repeat Simple_repeat 594 chr28 1241019 1241829 CR1-C4 343 - 1241019 1241829 0 2 317,277, 0,533, -,-, 350987 LINE CR1 594 chr28 1307486 1308317 CR1-X 471 - 1307486 1308317 0 2 687,138, 0,693, -,-, 351024 LINE CR1 595 chr28 1366789 1367018 (CACCAT)n 556 + 1366789 1367018 0 2 186,32, 0,197, +,+, 351063 Simple_repeat Simple_repeat 595 chr28 1372866 1373274 (GCATG)n 382 + 1372866 1373274 0 2 206,202, 0,206, +,+, 351074 Simple_repeat Simple_repeat 595 chr28 1373676 1374474 (GCATG)n 321 + 1373676 1374474 0 4 185,187,163,183, 0,206,436,615, +,+,+,+, 351078 Simple_repeat Simple_repeat 595 chr28 1404693 1405161 (CATCC)n 744 + 1404693 1405161 0 2 257,39, 0,429, +,+, 351111 Simple_repeat Simple_repeat 596 chr28 1461056 1461135 (CCCCT)n 296 + 1461056 1461135 0 2 24,20, 0,59, +,+, 351176 Simple_repeat Simple_repeat 596 chr28 1481634 1482049 CR1-F2 445 + 1481634 1482049 0 2 66,349, 0,66, +,+, 351189 LINE CR1 596 chr28 1486511 1486887 (CACAT)n 332 + 1486511 1486887 0 2 168,179, 0,197, +,+, 351193 Simple_repeat Simple_repeat 596 chr28 1535909 1536184 CR1-C4 574 - 1535909 1536184 0 2 173,102, 0,173, -,-, 351225 LINE CR1 596 chr28 1571808 1572050 CR1-D2 319 - 1571808 1572050 0 2 172,70, 0,172, -,-, 351242 LINE CR1 596 chr28 1572100 1572475 CR1-D2 610 + 1572100 1572475 0 2 222,150, 0,225, +,+, 351243 LINE CR1 598 chr28 1747524 1747791 CR1-Y4 570 - 1747524 1747791 0 2 112,81, 0,186, -,-, 351323 LINE CR1 598 chr28 1803574 1803682 (A)n 835 + 1803574 1803682 0 2 52,26, 0,82, +,+, 351356 Simple_repeat Simple_repeat 599 chr28 1845859 1846527 CR1-C4 472 - 1845859 1846527 0 2 92,254, 0,414, -,-, 351383 LINE CR1 600 chr28 1978372 1982356 CR1-F2 419 + 1978372 1982356 0 2 245,65, 0,3919, +,+, 351437 LINE CR1 601 chr28 2200509 2200590 (CCGCG)n 264 + 2200509 2200590 0 2 22,10, 0,71, +,+, 351583 Simple_repeat Simple_repeat 602 chr28 2248371 2248754 (TTAGGG)n 387 + 2248371 2248754 0 2 178,193, 0,190, +,+, 351631 Simple_repeat Simple_repeat 602 chr28 2320266 2320389 (TCTTTCC)n 150 + 2320266 2320389 0 2 20,69, 0,54, +,+, 351692 Simple_repeat Simple_repeat 603 chr28 2478547 2478624 (C)n 834 + 2478547 2478624 0 2 27,27, 0,50, +,+, 351842 Simple_repeat Simple_repeat 603 chr28 2484246 2484348 (TTTTTG)n 518 + 2484246 2484348 0 2 30,10, 0,92, +,+, 351845 Simple_repeat Simple_repeat 604 chr28 2615932 2616262 CR1-X2 299 - 2615932 2616262 0 2 134,96, 0,234, -,-, 351928 LINE CR1 605 chr28 2675788 2676129 CR1-C3 558 - 2675788 2676129 0 4 48,138,77,78, 0,48,186,263, -,-,-,-, 351964 LINE CR1 608 chr28 3034932 3035618 CR1-C3 723 - 3034932 3035618 0 2 319,356, 0,330, -,-, 352166 LINE CR1 608 chr28 3082895 3083007 (G)n 742 + 3082895 3083007 0 2 45,29, 0,83, +,+, 352229 Simple_repeat Simple_repeat 608 chr28 3085134 3085212 (GCCCC)n 466 + 3085134 3085212 0 2 9,19, 0,59, +,+, 352237 Simple_repeat Simple_repeat 609 chr28 3192169 3192223 (CGCAC)n 652 + 3192169 3192223 0 2 9,15, 0,39, +,+, 352353 Simple_repeat Simple_repeat 609 chr28 3229844 3230018 (GCAGT)n 674 + 3229844 3230018 0 2 98,53, 0,121, +,+, 352382 Simple_repeat Simple_repeat 609 chr28 3245524 3245724 (GACA)n 779 + 3245524 3245724 0 3 27,26,35, 0,76,165, +,+,+, 352400 Simple_repeat Simple_repeat 610 chr28 3296410 3296481 (GCTCCCT)n 398 + 3296410 3296481 0 2 10,16, 0,55, +,+, 352433 Simple_repeat Simple_repeat 610 chr28 3316562 3316806 (GCCCCACAGCT)n 250 - 3316562 3316806 0 2 101,127, 0,117, -,-, 352448 Satellite Satellite 610 chr28 3321724 3321988 (ACCCATAGGG)n 624 - 3321724 3321988 0 2 120,114, 0,150, -,-, 352453 Satellite Satellite 610 chr28 3375143 3375275 G-rich 581 + 3375143 3375275 0 2 27,47, 0,85, +,+, 352533 Low_complexity Low_complexity 612 chr28 3646833 3647064 CR1-F2 444 + 3646833 3647064 0 2 160,65, 0,166, +,+, 352727 LINE CR1 613 chr28 3746368 3746450 (CGGCTG)n 430 + 3746368 3746450 0 2 8,9, 0,73, +,+, 352759 Simple_repeat Simple_repeat 615 chr28 3950485 3950588 (T)n 627 + 3950485 3950588 0 2 56,24, 0,79, +,+, 352834 Simple_repeat Simple_repeat 615 chr28 3991884 3991962 (CCG)n 390 + 3991884 3991962 0 2 18,24, 0,54, +,+, 352889 Simple_repeat Simple_repeat 616 chr28 4111917 4112361 CR1-X2 472 - 4111917 4112361 0 2 134,245, 0,199, -,-, 352954 LINE CR1 616 chr28 4167012 4167159 (GCC)n 372 + 4167012 4167159 0 2 39,72, 0,75, +,+, 352970 Simple_repeat Simple_repeat 617 chr28 4212167 4212587 CR1-L3A_Croc 257 + 4212167 4212587 0 2 77,114, 0,306, +,+, 352980 LINE CR1 617 chr28 4308547 4308630 (GCC)n 422 + 4308547 4308630 0 2 24,12, 0,71, +,+, 353008 Simple_repeat Simple_repeat 618 chr28 4404323 4405083 CR1-L3A_Croc 250 - 4404323 4405083 0 2 222,417, 0,343, -,-, 353040 LINE CR1 620 chr28 4711748 4711849 (CTCTGCT)n 370 + 4711748 4711849 0 2 24,53, 0,48, +,+, 353184 Simple_repeat Simple_repeat 621 chr28 4792178 4792688 TguLTR5e 206 - 4792178 4792688 0 2 205,263, 0,247, -,-, 353227 LTR ERVL 622 chr28 4967796 4972769 GGXHOI 479 - 4967796 4972769 0 5 1352,1875,703,363,530, 0,1368,3285,4029,4443, -,-,-,-,-, 353313 Satellite W-chromosome 622 chr28 4972840 4974273 GGXHOI 433 - 4972840 4974273 0 3 607,596,202, 0,618,1231, -,-,-, 353314 Satellite W-chromosome 585 chr28_NT_463380v1_random 3505 3565 (GTGGAA)n 440 + 3505 3565 0 2 18,6, 0,54, +,+, 353320 Simple_repeat Simple_repeat 585 chr28_NT_463382v1_random 5493 9677 GGXHOI 506 - 5493 9677 0 6 1478,347,1067,359,233,583, 0,1499,1889,2973,3349,3601, -,-,-,-,-,-, 353333 Satellite W-chromosome 585 chr28_NT_463388v1_random 6081 6489 (GCATG)n 382 + 6081 6489 0 2 206,202, 0,206, +,+, 353368 Simple_repeat Simple_repeat 585 chr28_NT_463388v1_random 6891 7277 (GCATG)n 310 + 6891 7277 0 2 185,180, 0,206, +,+, 353372 Simple_repeat Simple_repeat 585 chr28_NT_463392v1_random 2915 3377 (TCCCCA)n 304 + 2915 3377 0 2 342,66, 0,396, +,+, 353401 Simple_repeat Simple_repeat 585 chr28_NT_463394v1_random 3527 6414 GGXHOI 444 - 3527 6414 0 6 209,147,652,177,809,800, 0,233,398,1066,1261,2087, -,-,-,-,-,-, 353415 Satellite W-chromosome 585 chr28_NT_463400v1_random 2889 3083 (CAGTG)n 416 + 2889 3083 0 2 42,25, 0,169, +,+, 353427 Simple_repeat Simple_repeat 585 chr2_NT_457873v1_random 866 5444 ENS1-LTR 875 - 866 5444 0 3 937,2827,813, 0,937,3765, -,-,-, 353487 LTR ERVL 585 chr2_NT_457873v1_random 8661 11566 GGLTR7-int 465 + 8661 11566 0 3 507,1043,1259, 0,507,1646, +,+,+, 353489 LTR ERV1 585 chr2_NT_457873v1_random 11591 16904 GGLTR3A 692 - 11591 16904 0 4 567,89,4131,526, 0,567,656,4787, -,-,-,-, 353490 LTR ERVL 585 chr2_NT_457873v1_random 17761 19816 GGERVL-A-int 492 + 17761 19816 0 2 529,1526, 0,529, +,+, 353492 LTR ERVL 585 chr2_NT_457873v1_random 22476 27128 GGERV10_LTR 780 + 22476 27128 0 4 83,154,972,3353, 0,172,327,1299, +,+,+,+, 353496 LTR ERVL 585 chr2_NT_457873v1_random 27128 29355 GGLTR7A 858 + 27128 29355 0 2 608,1619, 0,608, +,+, 353497 LTR ERV1 585 chr2_NT_457873v1_random 29390 34105 GGLTR7-int 850 - 29390 34105 0 3 1581,1619,609, 0,2487,4106, -,-,-, 353499 LTR ERV1 585 chr2_NT_457873v1_random 44324 45564 GGERVL-A-int 609 - 44324 45564 0 3 476,210,529, 0,501,711, -,-,-, 353513 LTR ERVL 585 chr2_NT_457873v1_random 46837 53593 GGLTR11-int 780 + 46837 53593 0 6 265,70,307,1986,770,3002, 0,266,336,643,2636,3754, +,+,+,+,+,+, 353515 LTR ERV1 585 chr2_NT_457873v1_random 53608 54083 GGERVL18-LTR 620 + 53608 54083 0 2 169,306, 0,169, +,+, 353517 LTR ERVL 585 chr2_NT_457873v1_random 54083 55514 CR1-C3 709 + 54083 55514 0 2 596,299, 0,1132, +,+, 353518 LINE CR1 585 chr2_NT_457873v1_random 58400 59198 GGLTR3E1 741 + 58400 59198 0 2 533,61, 0,737, +,+, 353521 LTR ERVL 585 chr2_NT_457873v1_random 59816 59908 GGERV20_I-int 557 + 59816 59908 0 2 54,37, 0,55, +,+, 353525 LTR ERVL 585 chr2_NT_457874v1_random 27124 29320 CR1-C4 317 + 27124 29320 0 2 682,801, 0,1395, +,+, 353560 LINE CR1 585 chr2_NT_457874v1_random 27810 28519 ENS1B-LTR 512 - 27810 28519 0 2 384,325, 0,384, -,-, 353562 LTR ERVL 585 chr2_NT_457874v1_random 31615 35999 GGERV20_I-int 351 - 31615 35999 0 4 202,2542,743,516, 0,208,2756,3868, -,-,-,-, 353566 LTR ERVL 585 chr2_NT_457874v1_random 42319 43640 CR1-F2 762 + 42319 43640 0 2 434,885, 0,436, +,+, 353573 LINE CR1 585 chr2_NT_457874v1_random 47548 49747 CR1-F 616 - 47548 49747 0 2 1676,155, 0,2044, -,-, 353581 LINE CR1 585 chr2_NT_457875v1_random 16646 17151 GGLTR3F2 696 + 16646 17151 0 2 230,208, 0,297, +,+, 353608 LTR ERVL 585 chr2_NT_457875v1_random 32627 34072 GGLTR3E3 831 - 32627 34072 0 2 506,60, 0,1385, -,-, 353620 LTR ERVL 585 chr2_NT_457875v1_random 39551 39895 GGLTR8B 368 + 39551 39895 0 2 140,204, 0,140, +,+, 353631 LTR ERVL 585 chr2_NT_457876v1_random 224 595 CR1-X 534 + 224 595 0 2 199,172, 0,199, +,+, 353637 LINE CR1 585 chr2_NT_457876v1_random 3576 3953 CR1-X 564 + 3576 3953 0 2 205,172, 0,205, +,+, 353641 LINE CR1 585 chr2_NT_457876v1_random 6936 7313 CR1-X 564 + 6936 7313 0 2 205,172, 0,205, +,+, 353645 LINE CR1 585 chr2_NT_457876v1_random 9644 10195 GGLTR8B 401 - 9644 10195 0 2 154,219, 0,332, -,-, 353649 LTR ERVL 585 chr2_NT_457876v1_random 10211 10634 CR1-X 512 + 10211 10634 0 2 206,217, 0,206, +,+, 353650 LINE CR1 585 chr2_NT_457876v1_random 13594 13973 CR1-X 555 + 13594 13973 0 2 207,172, 0,207, +,+, 353654 LINE CR1 585 chr2_NT_457876v1_random 16980 17359 CR1-X 555 + 16980 17359 0 2 207,172, 0,207, +,+, 353658 LINE CR1 585 chr2_NT_457876v1_random 20366 20745 CR1-X 555 + 20366 20745 0 2 207,172, 0,207, +,+, 353662 LINE CR1 585 chr2_NT_457876v1_random 23752 24131 CR1-X 555 + 23752 24131 0 2 207,172, 0,207, +,+, 353666 LINE CR1 585 chr2_NT_457876v1_random 27125 27503 CR1-X 570 + 27125 27503 0 2 206,172, 0,206, +,+, 353670 LINE CR1 585 chr2_NT_457876v1_random 30489 30867 CR1-X 570 + 30489 30867 0 2 206,172, 0,206, +,+, 353674 LINE CR1 585 chr2_NT_457876v1_random 37225 37604 CR1-X 586 + 37225 37604 0 2 207,172, 0,207, +,+, 353683 LINE CR1 585 chr2_NT_457876v1_random 40593 40972 CR1-X 586 + 40593 40972 0 2 207,172, 0,207, +,+, 353687 LINE CR1 585 chr2_NT_457876v1_random 43951 44330 CR1-X 586 + 43951 44330 0 2 207,172, 0,207, +,+, 353691 LINE CR1 585 chr2_NT_457878v1_random 2218 5706 CR1-C4 483 + 2218 5706 0 2 953,241, 0,3247, +,+, 353726 LINE CR1 585 chr2_NT_457878v1_random 11004 12322 CR1-C 841 + 11004 12322 0 2 903,415, 0,903, +,+, 353736 LINE CR1 585 chr2_NT_457878v1_random 13480 16968 CR1-C4 480 + 13480 16968 0 2 953,241, 0,3247, +,+, 353739 LINE CR1 585 chr2_NT_457878v1_random 22296 23614 CR1-C 840 + 22296 23614 0 2 903,415, 0,903, +,+, 353749 LINE CR1 585 chr2_NT_457878v1_random 24773 28260 CR1-C4 496 + 24773 28260 0 2 844,241, 0,3246, +,+, 353752 LINE CR1 585 chr2_NT_457878v1_random 25194 25781 CR1-Y4 310 + 25194 25781 0 2 318,60, 0,527, +,+, 353753 LINE CR1 585 chr2_NT_457878v1_random 38559 38941 CR1-C4 515 + 38559 38941 0 2 52,240, 0,142, +,+, 353768 LINE CR1 585 chr2_NT_457879v1_random 4525 5037 CR1-X2 765 + 4525 5037 0 2 147,365, 0,147, +,+, 353774 LINE CR1 585 chr2_NT_457879v1_random 5033 5755 CR1-E 672 - 5033 5755 0 2 188,212, 0,510, -,-, 353775 LINE CR1 585 chr2_NT_457879v1_random 8981 15533 GGERVL-B-int 607 - 8981 15533 0 3 566,864,3437, 0,566,3115, -,-,-, 353779 LTR ERVL 585 chr2_NT_457879v1_random 16174 18810 GGERVL-A-int 543 - 16174 18810 0 3 1199,416,538, 0,1682,2098, -,-,-, 353782 LTR ERVL 585 chr2_NT_457879v1_random 17373 17856 GGLTR3F2 844 + 17373 17856 0 2 231,222, 0,261, +,+, 353783 LTR ERVL 585 chr2_NT_457879v1_random 18810 20604 GGERVL18-int 692 + 18810 20604 0 4 148,503,788,346, 0,153,656,1448, +,+,+,+, 353785 LTR ERVL 585 chr2_NT_457879v1_random 20604 20938 GGERVL-B-int 512 + 20604 20938 0 2 151,183, 0,151, +,+, 353786 LTR ERVL 585 chr2_NT_457879v1_random 20947 21962 GGLTR3B4 485 - 20947 21962 0 3 174,345,202, 0,174,813, -,-,-, 353787 LTR ERVL 585 chr2_NT_457879v1_random 22751 23967 GGERV10_LTR 802 + 22751 23967 0 4 63,160,791,86, 0,178,339,1130, +,+,+,+, 353789 LTR ERVL 585 chr2_NT_457879v1_random 23975 27395 GGERV20_I-int 875 - 23975 27395 0 4 54,201,3006,158, 0,54,255,3262, -,-,-,-, 353791 LTR ERVL 585 chr2_NT_457879v1_random 28337 29187 GGLTR7-int 765 - 28337 29187 0 3 355,262,217, 0,355,633, -,-,-, 353792 LTR ERV1 585 chr2_NT_457879v1_random 29421 32102 GGERV28_I-int 192 - 29421 32102 0 2 1994,375, 0,2306, -,-, 353793 LTR ERVK 585 chr2_NT_457879v1_random 35500 36704 ENS3-int 495 - 35500 36704 0 2 884,320, 0,884, -,-, 353797 LTR ERVL 585 chr2_NT_457881v1_random 5947 6812 CR1-C 877 - 5947 6812 0 2 418,447, 0,418, -,-, 353849 LINE CR1 585 chr2_NT_457881v1_random 8095 12078 CR1-C4 602 - 8095 12078 0 2 105,53, 0,3930, -,-, 353852 LINE CR1 585 chr2_NT_457881v1_random 18711 19465 CR1-C4 590 + 18711 19465 0 2 127,372, 0,382, +,+, 353864 LINE CR1 585 chr2_NT_457882v1_random 2692 3072 CR1-C4 530 + 2692 3072 0 2 53,237, 0,143, +,+, 353875 LINE CR1 585 chr2_NT_457882v1_random 7949 8814 CR1-C 875 + 7949 8814 0 2 447,418, 0,447, +,+, 353881 LINE CR1 585 chr2_NT_457882v1_random 9955 13388 CR1-C4 494 + 9955 13388 0 2 844,241, 0,3192, +,+, 353884 LINE CR1 585 chr2_NT_457882v1_random 18268 19133 CR1-C 875 + 18268 19133 0 2 447,418, 0,447, +,+, 353894 LINE CR1 585 chr2_NT_457882v1_random 20273 23709 CR1-C4 493 + 20273 23709 0 2 845,241, 0,3195, +,+, 353897 LINE CR1 585 chr2_NT_457882v1_random 28570 28954 CR1-C4 537 + 28570 28954 0 2 53,241, 0,143, +,+, 353905 LINE CR1 585 chr2_NT_457884v1_random 1145 2154 CR1-C3 608 - 1145 2154 0 2 373,344, 0,665, -,-, 353933 LINE CR1 585 chr2_NT_457884v1_random 2473 2735 CR1-G 781 + 2473 2735 0 2 128,134, 0,128, +,+, 353936 LINE CR1 585 chr2_NT_457886v1_random 3484 5180 CR1-F 489 - 3484 5180 0 2 1415,242, 0,1454, -,-, 353986 LINE CR1 585 chr2_NT_457887v1_random 23021 23273 ENS1B-LTR 830 + 23021 23273 0 2 36,212, 0,40, +,+, 354028 LTR ERVL 585 chr2_NT_457890v1_random 6958 8503 GGLTR3D 541 + 6958 8503 0 2 631,914, 0,631, +,+, 354060 LTR ERVL 585 chr2_NT_457890v1_random 18561 20107 GGLTR3D 541 + 18561 20107 0 2 631,915, 0,631, +,+, 354066 LTR ERVL 585 chr2_NT_457891v1_random 23642 24275 GGERV10_LTR 471 - 23642 24275 0 2 74,87, 0,546, -,-, 354088 LTR ERVL 585 chr2_NT_457892v1_random 7165 8475 CR1-C 855 + 7165 8475 0 2 903,407, 0,903, +,+, 354099 LINE CR1 585 chr2_NT_457895v1_random 9340 10277 CR1-H 849 - 9340 10277 0 2 892,38, 0,899, -,-, 354177 LINE CR1 585 chr2_NT_457895v1_random 17623 18560 CR1-H 847 - 17623 18560 0 2 892,38, 0,899, -,-, 354182 LINE CR1 585 chr2_NT_457896v1_random 1323 3577 GGERVL-A-int 736 - 1323 3577 0 4 60,303,1789,102, 0,60,363,2152, -,-,-,-, 354189 LTR ERVL 585 chr2_NT_457896v1_random 8831 9360 GGLTR3F1 930 + 8831 9360 0 2 36,493, 0,36, +,+, 354191 LTR ERVL 585 chr2_NT_457896v1_random 14483 19988 GGLTR7A 831 - 14483 19988 0 2 611,4894, 0,611, -,-, 354194 LTR ERV1 585 chr2_NT_457898v1_random 5928 6504 CR1-H 848 + 5928 6504 0 2 39,47, 0,529, +,+, 354230 LINE CR1 585 chr2_NT_457898v1_random 9627 11456 CR1-D 633 - 9627 11456 0 2 238,577, 0,1252, -,-, 354235 LINE CR1 585 chr2_NT_457898v1_random 16297 17845 CR1-E 702 + 16297 17845 0 2 150,422, 0,1126, +,+, 354247 LINE CR1 585 chr2_NT_457898v1_random 18020 18949 GGLTR5B 641 + 18020 18949 0 2 46,63, 0,866, +,+, 354249 LTR ERVL 585 chr2_NT_457898v1_random 24443 24926 CR1-C4 388 - 24443 24926 0 2 384,47, 0,436, -,-, 354257 LINE CR1 585 chr2_NT_457899v1_random 4576 8164 CR1-F2 422 - 4576 8164 0 2 252,85, 0,3503, -,-, 354265 LINE CR1 585 chr2_NT_457899v1_random 4867 5746 CR1-C 826 - 4867 5746 0 2 254,625, 0,254, -,-, 354266 LINE CR1 585 chr2_NT_457899v1_random 19586 20043 CR1-C2 765 + 19586 20043 0 2 365,92, 0,365, +,+, 354278 LINE CR1 585 chr2_NT_457900v1_random 9915 13295 GGLTR10B 919 - 9915 13295 0 3 382,2588,382, 0,385,2998, -,-,-, 354289 LTR ERVK 585 chr2_NT_457901v1_random 9278 10215 CR1-H 847 - 9278 10215 0 2 892,38, 0,899, -,-, 354307 LINE CR1 585 chr2_NT_457902v1_random 8185 12830 ENS1-LTR 971 + 8185 12830 0 3 913,2819,913, 0,913,3732, +,+,+, 354327 LTR ERVL 585 chr2_NT_457903v1_random 9258 9448 (AGG)n 838 + 9258 9448 0 3 22,22,22, 0,84,168, +,+,+, 354350 Simple_repeat Simple_repeat 585 chr2_NT_457904v1_random 2698 2804 (TCC)n 804 + 2698 2804 0 2 22,22, 0,84, +,+, 354362 Simple_repeat Simple_repeat 585 chr2_NT_457904v1_random 7967 8103 (TCC)n 688 + 7967 8103 0 2 28,45, 0,91, +,+, 354372 Simple_repeat Simple_repeat 585 chr2_NT_457904v1_random 14523 14623 (TCC)n 855 + 14523 14623 0 2 22,22, 0,78, +,+, 354380 Simple_repeat Simple_repeat 585 chr2_NT_457904v1_random 14762 14966 (TCC)n 816 + 14762 14966 0 3 22,28,31, 0,84,173, +,+,+, 354381 Simple_repeat Simple_repeat 585 chr2_NT_457904v1_random 17255 17460 (TCC)n 791 + 17255 17460 0 3 22,28,31, 0,84,174, +,+,+, 354384 Simple_repeat Simple_repeat 585 chr2_NT_457905v1_random 1385 2917 GGLTR3D 524 + 1385 2917 0 2 618,914, 0,618, +,+, 354392 LTR ERVL 585 chr2_NT_457905v1_random 12974 14520 GGLTR3D 541 + 12974 14520 0 2 631,915, 0,631, +,+, 354398 LTR ERVL 585 chr2_NT_457905v1_random 20579 22085 GGLTR3D 507 + 20579 22085 0 2 628,878, 0,628, +,+, 354402 LTR ERVL 585 chr2_NT_457906v1_random 9198 10516 CR1-C 840 + 9198 10516 0 2 903,415, 0,903, +,+, 354411 LINE CR1 585 chr2_NT_457906v1_random 11673 15161 CR1-C4 480 + 11673 15161 0 2 953,241, 0,3247, +,+, 354414 LINE CR1 585 chr2_NT_457907v1_random 7642 8469 CR1-Y1_Aves 517 - 7642 8469 0 2 146,246, 0,581, -,-, 354432 LINE CR1 585 chr2_NT_457907v1_random 7792 8224 CR1-X 675 + 7792 8224 0 3 181,112,48, 0,272,384, +,+,+, 354433 LINE CR1 585 chr2_NT_457907v1_random 16863 17977 CR1-L3A_Croc 110 - 16863 17977 0 2 646,195, 0,919, -,-, 354440 LINE CR1 585 chr2_NT_457909v1_random 6069 6659 GGLTR3B1 827 + 6069 6659 0 2 508,82, 0,508, +,+, 354471 LTR ERVL 585 chr2_NT_457910v1_random 397 5155 CR1-Y3 679 - 397 5155 0 2 336,545, 0,4213, -,-, 354489 LINE CR1 585 chr2_NT_457912v1_random 9992 14619 GGLTR3C1 448 - 9992 14619 0 2 95,498, 0,4129, -,-, 354530 LTR ERVL 585 chr2_NT_457913v1_random 9174 14989 GGLTR3F1 901 - 9174 14989 0 2 5320,494, 0,5321, -,-, 354538 LTR ERVL 585 chr2_NT_457914v1_random 6543 8200 GGERVL-B-int 725 - 6543 8200 0 3 416,743,496, 0,416,1161, -,-,-, 354556 LTR ERVL 585 chr2_NT_457915v1_random 3589 4186 GGLTR3D 578 + 3589 4186 0 2 438,78, 0,519, +,+, 354570 LTR ERVL 585 chr2_NT_457915v1_random 14210 14652 (AGG)n 821 + 14210 14652 0 6 22,22,22,22,22,22, 0,84,168,252,336,420, +,+,+,+,+,+, 354583 Simple_repeat Simple_repeat 585 chr2_NT_457915v1_random 16983 17173 (AGG)n 838 + 16983 17173 0 3 22,22,22, 0,84,168, +,+,+, 354587 Simple_repeat Simple_repeat 585 chr2_NT_457915v1_random 19498 19688 (AGG)n 838 + 19498 19688 0 3 22,22,22, 0,84,168, +,+,+, 354591 Simple_repeat Simple_repeat 585 chr2_NT_457916v1_random 6806 11679 GGERV10_LTR 784 + 6806 11679 0 3 44,160,4609, 0,103,264, +,+,+, 354596 LTR ERVL 585 chr2_NT_457917v1_random 2461 2926 (TCC)n 797 + 2461 2926 0 6 22,22,22,19,28,43, 0,84,167,251,332,422, +,+,+,+,+,+, 354609 Simple_repeat Simple_repeat 585 chr2_NT_457917v1_random 5057 5442 (TCC)n 799 + 5057 5442 0 5 22,22,22,28,43, 0,84,168,252,342, +,+,+,+,+, 354611 Simple_repeat Simple_repeat 585 chr2_NT_457917v1_random 7572 8041 (TCC)n 800 + 7572 8041 0 6 22,22,22,22,28,43, 0,84,168,252,336,426, +,+,+,+,+,+, 354613 Simple_repeat Simple_repeat 585 chr2_NT_457917v1_random 10171 10722 (TCC)n 800 + 10171 10722 0 7 22,22,22,22,22,28,43, 0,84,168,250,334,418,508, +,+,+,+,+,+,+, 354615 Simple_repeat Simple_repeat 585 chr2_NT_457920v1_random 12250 15726 CR1-C4 489 + 12250 15726 0 2 844,241, 0,3235, +,+, 354662 LINE CR1 585 chr2_NT_457920v1_random 20227 20591 GGLTR3B1 762 + 20227 20591 0 2 107,226, 0,138, +,+, 354671 LTR ERVL 585 chr2_NT_457920v1_random 20596 21115 CR1-C 830 + 20596 21115 0 2 105,414, 0,105, +,+, 354672 LINE CR1 585 chr2_NT_457921v1_random 3221 4318 CR1-Y2_Aves 281 - 3221 4318 0 2 468,526, 0,571, -,-, 354678 LINE CR1 585 chr2_NT_457921v1_random 9522 9695 TguLTR5e 508 + 9522 9695 0 2 39,60, 0,113, +,+, 354688 LTR ERVL 585 chr2_NT_457921v1_random 17252 19772 GGERVL-C-int 803 - 17252 19772 0 3 563,548,1047, 0,563,1473, -,-,-, 354697 LTR ERVL 585 chr2_NT_457922v1_random 3754 3863 (TCC)n 817 + 3754 3863 0 2 22,25, 0,84, +,+, 354702 Simple_repeat Simple_repeat 585 chr2_NT_457922v1_random 4004 4137 (TCC)n 740 + 4004 4137 0 2 28,43, 0,90, +,+, 354703 Simple_repeat Simple_repeat 585 chr2_NT_457922v1_random 6262 6814 (TCC)n 800 + 6262 6814 0 7 22,22,22,22,22,28,43, 0,84,168,252,336,420,509, +,+,+,+,+,+,+, 354705 Simple_repeat Simple_repeat 585 chr2_NT_457922v1_random 16136 16698 GGLTR3D 534 - 16136 16698 0 2 88,445, 0,117, -,-, 354714 LTR ERVL 585 chr2_NT_457925v1_random 962 1001 (TTTCT)n 476 + 962 1001 0 2 9,13, 0,26, +,+, 354758 Simple_repeat Simple_repeat 585 chr2_NT_457925v1_random 4490 5744 CR1-Y1_Aves 428 - 4490 5744 0 2 905,325, 0,929, -,-, 354762 LINE CR1 585 chr2_NT_457926v1_random 2651 6051 CR1-C4 459 + 2651 6051 0 2 844,229, 0,3171, +,+, 354776 LINE CR1 585 chr2_NT_457926v1_random 3072 3659 CR1-Y4 310 + 3072 3659 0 2 318,60, 0,527, +,+, 354777 LINE CR1 585 chr2_NT_457926v1_random 9285 19265 CR1-C4 495 + 9285 19265 0 3 93,940,92, 0,3140,9888, +,+,+, 354783 LINE CR1 585 chr2_NT_457926v1_random 10461 11314 CR1-C 820 + 10461 11314 0 2 441,412, 0,441, +,+, 354786 LINE CR1 585 chr2_NT_457929v1_random 4793 5009 GGLTR3E1 897 + 4793 5009 0 2 73,143, 0,73, +,+, 354819 LTR ERVL 585 chr2_NT_457929v1_random 13818 14566 (AT)n 610 + 13818 14566 0 2 58,677, 0,71, +,+, 354829 Simple_repeat Simple_repeat 585 chr2_NT_457931v1_random 1251 1410 CR1-X2 649 - 1251 1410 0 2 55,70, 0,89, -,-, 354850 LINE CR1 585 chr2_NT_457932v1_random 2332 5566 CR1-D 484 + 2332 5566 0 2 139,344, 0,2890, +,+, 354871 LINE CR1 585 chr2_NT_457932v1_random 8505 9442 CR1-H 849 + 8505 9442 0 2 38,892, 0,45, +,+, 354877 LINE CR1 585 chr2_NT_457935v1_random 5330 7358 CR1-F 528 + 5330 7358 0 2 362,1201, 0,827, +,+, 354921 LINE CR1 585 chr2_NT_457935v1_random 7708 8230 GGLTR3F1 879 - 7708 8230 0 2 486,36, 0,486, -,-, 354923 LTR ERVL 585 chr2_NT_457935v1_random 13467 15722 GGERVL-A-int 727 + 13467 15722 0 4 102,1823,272,58, 0,102,1925,2197, +,+,+,+, 354925 LTR ERVL 585 chr2_NT_457935v1_random 15721 17556 GGLTR3A 868 + 15721 17556 0 2 1308,526, 0,1309, +,+, 354926 LTR ERVL 585 chr2_NT_457936v1_random 2150 2914 CR1-C 600 + 2150 2914 0 2 420,344, 0,420, +,+, 354932 LINE CR1 585 chr2_NT_457936v1_random 4037 11013 CR1-B2 489 + 4037 11013 0 3 833,138,91, 0,3183,6885, +,+,+, 354935 LINE CR1 585 chr2_NT_457936v1_random 18686 19130 CR1-Y4 247 - 18686 19130 0 2 193,189, 0,255, -,-, 354949 LINE CR1 585 chr2_NT_457937v1_random 14030 15351 CR1-Y1_Aves 319 - 14030 15351 0 2 147,126, 0,1195, -,-, 354959 LINE CR1 585 chr2_NT_457940v1_random 7364 7470 (AGG)n 804 + 7364 7470 0 2 22,22, 0,84, +,+, 355000 Simple_repeat Simple_repeat 585 chr2_NT_457940v1_random 14712 14896 (AGG)n 833 + 14712 14896 0 3 19,22,22, 0,80,162, +,+,+, 355008 Simple_repeat Simple_repeat 585 chr2_NT_457940v1_random 17281 17470 (AGG)n 838 + 17281 17470 0 3 22,22,22, 0,83,167, +,+,+, 355012 Simple_repeat Simple_repeat 585 chr2_NT_457945v1_random 2451 3553 Mariner1_GG 593 - 2451 3553 0 2 836,266, 0,836, -,-, 355058 DNA TcMar-Mariner 585 chr2_NT_457946v1_random 7177 7421 CR1-C4 344 - 7177 7421 0 2 26,181, 0,63, -,-, 355075 LINE CR1 585 chr2_NT_457946v1_random 9813 18647 ENS1B-LTR 769 - 9813 18647 0 3 814,7291,728, 0,814,8106, -,-,-, 355080 LTR ERVL 585 chr2_NT_457947v1_random 7504 8047 GGLTR5B 556 - 7504 8047 0 2 52,458, 0,85, -,-, 355083 LTR ERVL 585 chr2_NT_457953v1_random 8838 9786 ENS1B-LTR 563 + 8838 9786 0 2 114,441, 0,507, +,+, 355161 LTR ERVL 585 chr2_NT_457953v1_random 16601 17631 CR1-C4 438 - 16601 17631 0 2 389,599, 0,431, -,-, 355171 LINE CR1 585 chr2_NT_457954v1_random 976 1326 GGERV10_LTR 514 - 976 1326 0 2 158,91, 0,259, -,-, 355175 LTR ERVL 585 chr2_NT_457954v1_random 8471 10039 GGLTR8B 477 - 8471 10039 0 2 726,324, 0,1244, -,-, 355181 LTR ERVL 585 chr2_NT_457955v1_random 1437 1818 CR1-G 488 + 1437 1818 0 2 66,309, 0,72, +,+, 355199 LINE CR1 585 chr2_NT_457955v1_random 15702 16590 CR1-Y2 321 + 15702 16590 0 3 39,30,384, 0,192,504, +,+,+, 355209 LINE CR1 585 chr2_NT_457955v1_random 15877 16208 GGERV10_LTR 655 - 15877 16208 0 2 160,78, 0,253, -,-, 355211 LTR ERVL 585 chr2_NT_457956v1_random 14330 15617 (GCCCCACAGCT)n 306 - 14330 15617 0 5 120,122,551,133,264, 0,161,303,870,1023, -,-,-,-,-, 355232 Satellite Satellite 585 chr2_NT_457957v1_random 409 679 (AGG)n 830 + 409 679 0 4 22,22,22,22, 0,83,166,248, +,+,+,+, 355239 Simple_repeat Simple_repeat 585 chr2_NT_457957v1_random 2813 2909 (AGG)n 804 + 2813 2909 0 2 22,22, 0,74, +,+, 355241 Simple_repeat Simple_repeat 585 chr2_NT_457957v1_random 10334 10521 (AGG)n 804 + 10334 10521 0 3 22,22,22, 0,82,165, +,+,+, 355252 Simple_repeat Simple_repeat 585 chr2_NT_457957v1_random 12935 13043 (AGG)n 808 + 12935 13043 0 2 23,22, 0,86, +,+, 355256 Simple_repeat Simple_repeat 585 chr2_NT_457957v1_random 13193 13299 (AGG)n 855 + 13193 13299 0 2 22,22, 0,84, +,+, 355257 Simple_repeat Simple_repeat 585 chr2_NT_457958v1_random 2930 4693 CR1-X 435 + 2930 4693 0 3 691,282,102, 0,1264,1661, +,+,+, 355266 LINE CR1 585 chr2_NT_457959v1_random 4867 6413 GGLTR3D 541 + 4867 6413 0 2 631,915, 0,631, +,+, 355277 LTR ERVL 585 chr2_NT_457960v1_random 13504 14159 CR1-11_Crp 172 - 13504 14159 0 2 120,437, 0,218, -,-, 355292 LINE CR1 585 chr2_NT_457965v1_random 9164 11380 CR1-E 294 - 9164 11380 0 2 551,160, 0,2056, -,-, 355352 LINE CR1 585 chr2_NT_457965v1_random 16244 16542 CR1-Y2 671 + 16244 16542 0 2 48,49, 0,249, +,+, 355357 LINE CR1 585 chr2_NT_457967v1_random 3459 7729 GGERVL-A-int 143 + 3459 7729 0 2 123,121, 0,4149, +,+, 355370 LTR ERVL 585 chr2_NT_457967v1_random 11821 12237 GGLTR3C1 510 + 11821 12237 0 2 156,187, 0,229, +,+, 355377 LTR ERVL 585 chr2_NT_457973v1_random 2614 5043 CR1-D 708 + 2614 5043 0 2 342,602, 0,1827, +,+, 355427 LINE CR1 585 chr2_NT_457974v1_random 14038 14086 (GCCCCG)n 420 + 14038 14086 0 2 12,7, 0,41, +,+, 355441 Simple_repeat Simple_repeat 585 chr2_NT_457982v1_random 5286 8789 CR1-L3A_Croc 132 - 5286 8789 0 4 430,537,767,433, 0,587,1179,3070, -,-,-,-, 355521 LINE CR1 585 chr2_NT_457982v1_random 7241 8263 CR1-X 613 + 7241 8263 0 2 675,347, 0,675, +,+, 355522 LINE CR1 585 chr2_NT_457985v1_random 1065 2007 CR1-H 825 + 1065 2007 0 2 37,898, 0,44, +,+, 355549 LINE CR1 585 chr2_NT_457985v1_random 13102 14037 CR1-H 844 + 13102 14037 0 2 38,890, 0,45, +,+, 355558 LINE CR1 585 chr2_NT_457986v1_random 901 2046 Mariner1_GG 556 - 901 2046 0 2 145,73, 0,1072, -,-, 355561 DNA TcMar-Mariner 585 chr2_NT_457986v1_random 2390 3567 GGLTR12C 661 + 2390 3567 0 3 114,40,103, 0,114,1074, +,+,+, 355563 LTR ERVL 585 chr2_NT_457997v1_random 820 1792 CR1-B2 678 + 820 1792 0 2 639,178, 0,794, +,+, 355692 LINE CR1 585 chr2_NT_457997v1_random 1782 2367 CR1-H 849 + 1782 2367 0 2 38,48, 0,537, +,+, 355694 LINE CR1 585 chr2_NT_457997v1_random 3621 4314 CR1-D 855 - 3621 4314 0 2 84,65, 0,628, -,-, 355696 LINE CR1 585 chr2_NT_457997v1_random 5499 6909 CR1-D 700 - 5499 6909 0 2 239,154, 0,1256, -,-, 355698 LINE CR1 585 chr2_NT_457997v1_random 9125 10670 CR1-E 661 + 9125 10670 0 2 148,425, 0,1120, +,+, 355704 LINE CR1 585 chr2_NT_457999v1_random 2125 2312 (AGG)n 833 + 2125 2312 0 3 19,22,22, 0,81,165, +,+,+, 355726 Simple_repeat Simple_repeat 585 chr2_NT_457999v1_random 6671 7223 GGLTR3D 578 + 6671 7223 0 2 438,78, 0,474, +,+, 355728 LTR ERVL 585 chr2_NT_457999v1_random 12618 12840 GGERVL-C-int 708 - 12618 12840 0 2 159,54, 0,168, -,-, 355732 LTR ERVL 585 chr2_NT_458000v1_random 1348 2616 CR1-C 727 + 1348 2616 0 2 898,370, 0,898, +,+, 355738 LINE CR1 585 chr2_NT_458000v1_random 6857 10424 CR1-C4 665 + 6857 10424 0 2 53,91, 0,3476, +,+, 355744 LINE CR1 585 chr2_NT_458000v1_random 12145 13458 CR1-C 832 + 12145 13458 0 2 898,415, 0,898, +,+, 355750 LINE CR1 585 chr2_NT_458003v1_random 1532 2799 CR1-Y4 488 - 1532 2799 0 2 67,260, 0,1007, -,-, 355780 LINE CR1 585 chr2_NT_458004v1_random 326 812 GGERVL18-int 700 + 326 812 0 2 100,379, 0,107, +,+, 355787 LTR ERVL 585 chr2_NT_458004v1_random 812 7008 GGLTR10C2 470 + 812 7008 0 2 82,272, 0,5924, +,+, 355788 LTR ERVK 585 chr2_NT_458004v1_random 916 6733 GGERV10_LTR 920 - 916 6733 0 3 220,5372,224, 0,220,5593, -,-,-, 355789 LTR ERVL 585 chr2_NT_458004v1_random 7008 8991 GGERV30_LTR 808 + 7008 8991 0 2 1798,185, 0,1798, +,+, 355790 LTR ERVL 585 chr2_NT_458005v1_random 3381 3778 (CACAG)n 488 + 3381 3778 0 2 189,185, 0,212, +,+, 355795 Simple_repeat Simple_repeat 585 chr2_NT_458005v1_random 11215 12087 CR1-B2 589 - 11215 12087 0 2 131,84, 0,788, -,-, 355815 LINE CR1 585 chr2_NT_458007v1_random 12390 12981 CR1-E 707 - 12390 12981 0 2 83,412, 0,179, -,-, 355844 LINE CR1 585 chr2_NT_458008v1_random 2729 2999 Charlie12_GG 465 - 2729 2999 0 2 95,49, 0,221, -,-, 355847 DNA hAT-Charlie 585 chr2_NT_458013v1_random 1673 3963 GGERVL-A-int 713 + 1673 3963 0 3 1186,508,595, 0,1186,1695, +,+,+, 355884 LTR ERVL 585 chr2_NT_458013v1_random 3949 7251 GGERVL-A-int 720 + 3949 7251 0 3 2235,500,566, 0,2235,2736, +,+,+, 355885 LTR ERVL 585 chr2_NT_458013v1_random 7237 9927 GGLTR3F1 902 + 7237 9927 0 2 2196,494, 0,2196, +,+, 355886 LTR ERVL 585 chr2_NT_458013v1_random 9931 11621 GGLTR3F1 921 + 9931 11621 0 2 1187,503, 0,1187, +,+, 355887 LTR ERVL 585 chr2_NT_458013v1_random 11625 13317 GGLTR3F1 916 + 11625 13317 0 2 1193,499, 0,1193, +,+, 355888 LTR ERVL 585 chr2_NT_458015v1_random 307 809 GGLTR3F1 784 - 307 809 0 2 232,236, 0,266, -,-, 355895 LTR ERVL 585 chr2_NT_458015v1_random 1762 6227 GGLTR7A 850 - 1762 6227 0 4 143,3423,269,609, 0,164,3587,3856, -,-,-,-, 355899 LTR ERV1 585 chr2_NT_458015v1_random 9957 11312 CR1-H 758 - 9957 11312 0 2 1050,305, 0,1050, -,-, 355902 LINE CR1 585 chr2_NT_458015v1_random 11300 12176 CR1-B2 720 + 11300 12176 0 2 113,758, 0,118, +,+, 355903 LINE CR1 585 chr2_NT_458016v1_random 2719 3250 GGLTR3F1 932 - 2719 3250 0 2 495,36, 0,495, -,-, 355909 LTR ERVL 585 chr2_NT_458016v1_random 3250 9072 GGLTR3F1 894 - 3250 9072 0 2 5325,496, 0,5326, -,-, 355910 LTR ERVL 585 chr2_NT_458019v1_random 9111 13887 GGERVL-A-int 540 + 9111 13887 0 3 556,2013,1381, 0,559,3395, +,+,+, 355927 LTR ERVL 585 chr2_NT_458023v1_random 8053 9374 CR1-X 594 + 8053 9374 0 2 674,243, 0,1078, +,+, 355955 LINE CR1 585 chr2_NT_458027v1_random 1853 5083 CR1-D 458 + 1853 5083 0 2 137,344, 0,2886, +,+, 355986 LINE CR1 585 chr2_NT_458027v1_random 8022 8959 CR1-H 849 + 8022 8959 0 2 38,892, 0,45, +,+, 355992 LINE CR1 585 chr2_NT_458027v1_random 12188 12538 GGLTR3C1 419 - 12188 12538 0 2 221,99, 0,251, -,-, 355995 LTR ERVL 585 chr2_NT_458029v1_random 11757 12878 GGLTR5A 453 + 11757 12878 0 2 222,189, 0,932, +,+, 356009 LTR ERVL 585 chr2_NT_458030v1_random 8517 9379 CR1-11_Crp 207 + 8517 9379 0 2 558,187, 0,675, +,+, 356019 LINE CR1 585 chr2_NT_458033v1_random 2051 2187 GA-rich 678 + 2051 2187 0 2 46,28, 0,108, +,+, 356030 Low_complexity Low_complexity 585 chr2_NT_458033v1_random 2249 2595 (AGG)n 824 + 2249 2595 0 5 22,22,22,22,22, 0,84,168,240,324, +,+,+,+,+, 356031 Simple_repeat Simple_repeat 585 chr2_NT_458033v1_random 4900 5172 (AGG)n 855 + 4900 5172 0 4 22,22,22,22, 0,83,167,250, +,+,+,+, 356035 Simple_repeat Simple_repeat 585 chr2_NT_458033v1_random 9440 9626 (AGG)n 838 + 9440 9626 0 3 22,22,22, 0,79,164, +,+,+, 356039 Simple_repeat Simple_repeat 585 chr2_NT_458033v1_random 11836 11942 (AGG)n 804 + 11836 11942 0 2 22,22, 0,84, +,+, 356043 Simple_repeat Simple_repeat 585 chr2_NT_458036v1_random 2835 8356 CR1-Y 706 + 2835 8356 0 2 150,663, 0,4858, +,+, 356064 LINE CR1 585 chr2_NT_458036v1_random 2985 7693 ENS1-LTR 939 - 2985 7693 0 3 938,2832,938, 0,938,3770, -,-,-, 356065 LTR ERVL 585 chr2_NT_458037v1_random 11392 12627 CR1-Y1_Aves 519 + 11392 12627 0 3 134,85,490, 0,655,745, +,+,+, 356087 LINE CR1 585 chr2_NT_458038v1_random 3261 7159 CR1-C4 603 + 3261 7159 0 2 52,105, 0,3793, +,+, 356093 LINE CR1 585 chr2_NT_458038v1_random 8589 9842 CR1-C 620 + 8589 9842 0 2 866,387, 0,866, +,+, 356101 LINE CR1 585 chr2_NT_458040v1_random 7077 7526 CR1-F2 529 + 7077 7526 0 2 133,316, 0,133, +,+, 356115 LINE CR1 585 chr2_NT_458046v1_random 8009 8461 (CAGG)n 381 + 8009 8461 0 2 212,211, 0,241, +,+, 356160 Simple_repeat Simple_repeat 585 chr2_NT_458046v1_random 9340 10118 (CAGG)n 419 + 9340 10118 0 3 204,294,207, 0,233,571, +,+,+, 356167 Simple_repeat Simple_repeat 585 chr2_NT_458047v1_random 2591 2781 (AGG)n 815 + 2591 2781 0 3 25,22,22, 0,85,168, +,+,+, 356175 Simple_repeat Simple_repeat 585 chr2_NT_458050v1_random 11993 12355 CR1-F2 669 + 11993 12355 0 2 321,41, 0,321, +,+, 356197 LINE CR1 585 chr2_NT_458053v1_random 878 2158 CR1-H 603 + 878 2158 0 2 303,977, 0,303, +,+, 356206 LINE CR1 585 chr2_NT_458053v1_random 10898 12235 CR1-H 729 + 10898 12235 0 2 324,1013, 0,324, +,+, 356212 LINE CR1 585 chr2_NT_458054v1_random 10036 10910 CR1-C 719 - 10036 10910 0 2 160,703, 0,171, -,-, 356216 LINE CR1 585 chr2_NT_458057v1_random 5716 6355 CR1-E 494 + 5716 6355 0 2 582,57, 0,582, +,+, 356241 LINE CR1 585 chr2_NT_458057v1_random 7316 10742 GGERVL18-int 771 + 7316 10742 0 2 805,787, 0,2639, +,+, 356244 LTR ERVL 585 chr2_NT_458058v1_random 5523 6756 CR1-H 733 + 5523 6756 0 2 233,1000, 0,233, +,+, 356250 LINE CR1 585 chr2_NT_458060v1_random 1743 1847 (AGG)n 808 + 1743 1847 0 2 22,23, 0,81, +,+, 356259 Simple_repeat Simple_repeat 585 chr2_NT_458061v1_random 3722 5056 Char12Mar1_GG 666 - 3722 5056 0 2 89,465, 0,869, -,-, 356270 DNA hAT-Charlie 585 chr2_NT_458063v1_random 9722 10661 CR1-H 813 + 9722 10661 0 2 38,894, 0,45, +,+, 356288 LINE CR1 585 chr2_NT_458068v1_random 1770 3024 CR1-D 616 - 1770 3024 0 2 201,1019, 0,235, -,-, 356310 LINE CR1 585 chr2_NT_458079v1_random 9396 11313 CR1-F2 449 - 9396 11313 0 2 106,126, 0,1791, -,-, 356394 LINE CR1 585 chr2_NT_458084v1_random 2671 2892 GGERVL-C-int 717 + 2671 2892 0 2 53,159, 0,62, +,+, 356421 LTR ERVL 585 chr2_NT_458088v1_random 642 993 GGERV10_LTR 538 - 642 993 0 2 250,72, 0,279, -,-, 356448 LTR ERVL 585 chr2_NT_458088v1_random 1549 4732 GGERV28_I-int 881 + 1549 4732 0 3 478,1491,289, 0,478,2894, +,+,+, 356450 LTR ERVK 585 chr2_NT_458088v1_random 3497 3983 GGLTR7-int 751 + 3497 3983 0 2 141,345, 0,141, +,+, 356451 LTR ERV1 585 chr2_NT_458088v1_random 4725 8960 GGERVL-A-int 875 - 4725 8960 0 3 208,45,3940, 0,208,295, -,-,-, 356452 LTR ERVL 585 chr2_NT_458088v1_random 8960 11163 ENS1-int 943 - 8960 11163 0 2 153,2050, 0,153, -,-, 356453 LTR ERVL 585 chr2_NT_458094v1_random 2251 2628 CR1-X 585 - 2251 2628 0 2 176,201, 0,176, -,-, 356493 LINE CR1 585 chr2_NT_458094v1_random 5524 5949 CR1-X 542 - 5524 5949 0 2 224,201, 0,224, -,-, 356497 LINE CR1 585 chr2_NT_458094v1_random 8878 9303 CR1-X 542 - 8878 9303 0 2 224,201, 0,224, -,-, 356501 LINE CR1 585 chr2_NT_458096v1_random 8815 9339 GGERVK10-int 566 - 8815 9339 0 2 372,151, 0,373, -,-, 356517 LTR ERVK 585 chr2_NT_458097v1_random 5242 5619 CR1-X 564 - 5242 5619 0 2 178,199, 0,178, -,-, 356524 LINE CR1 585 chr2_NT_458097v1_random 8523 8945 CR1-X 524 - 8523 8945 0 2 224,198, 0,224, -,-, 356528 LINE CR1 585 chr2_NT_458098v1_random 7680 8496 Mariner1_GG 731 - 7680 8496 0 2 84,717, 0,99, -,-, 356537 DNA TcMar-Mariner 585 chr2_NT_458101v1_random 6716 7443 GGERVL18-int 750 - 6716 7443 0 2 140,587, 0,140, -,-, 356557 LTR ERVL 585 chr2_NT_458105v1_random 1344 2449 CR1-C4 251 - 1344 2449 0 2 211,151, 0,954, -,-, 356586 LINE CR1 585 chr2_NT_458105v1_random 10227 10958 CR1-X1 618 + 10227 10958 0 2 205,525, 0,206, +,+, 356592 LINE CR1 585 chr2_NT_458112v1_random 3281 3341 (TTTGGT)n 422 + 3281 3341 0 2 32,11, 0,49, +,+, 356633 Simple_repeat Simple_repeat 585 chr2_NT_458114v1_random 10261 10836 CR1-X2 586 + 10261 10836 0 2 141,431, 0,144, +,+, 356654 LINE CR1 585 chr2_NT_458115v1_random 1463 2184 (CCTG)n 266 + 1463 2184 0 3 222,220,226, 0,250,495, +,+,+, 356658 Simple_repeat Simple_repeat 585 chr2_NT_458115v1_random 4591 5074 (CCTG)n 284 + 4591 5074 0 2 209,223, 0,260, +,+, 356663 Simple_repeat Simple_repeat 585 chr2_NT_458121v1_random 7196 8914 CR1-F2 472 + 7196 8914 0 2 1023,695, 0,1023, +,+, 356711 LINE CR1 585 chr2_NT_458131v1_random 2819 10379 GGLTR7A 839 - 2819 10379 0 3 609,6377,574, 0,609,6986, -,-,-, 356778 LTR ERV1 585 chr2_NT_458133v1_random 1971 2504 REP131 331 - 1971 2504 0 2 69,463, 0,70, -,-, 356789 DNA? DNA? 585 chr2_NT_458137v1_random 3235 3901 CR1-Y2_Aves 380 - 3235 3901 0 2 392,174, 0,492, -,-, 356816 LINE CR1 585 chr2_NT_458139v1_random 2007 2504 CR1-B 525 + 2007 2504 0 2 335,129, 0,368, +,+, 356832 LINE CR1 585 chr2_NT_458142v1_random 8681 9443 REP131 180 - 8681 9443 0 2 155,472, 0,290, -,-, 356889 DNA? DNA? 585 chr2_NT_458169v1_random 885 1183 CR1-F0 758 + 885 1183 0 2 127,148, 0,150, +,+, 357057 LINE CR1 585 chr2_NT_458178v1_random 4952 5123 GGLTR12C 613 - 4952 5123 0 2 109,60, 0,111, -,-, 357110 LTR ERVL 585 chr2_NT_458178v1_random 5133 6449 CR1-C 721 - 5133 6449 0 2 467,789, 0,527, -,-, 357111 LINE CR1 585 chr2_NT_458178v1_random 7225 7942 GGLTR8B 480 + 7225 7942 0 2 351,366, 0,351, +,+, 357112 LTR ERVL 585 chr2_NT_458180v1_random 3976 5004 CR1-D2 484 + 3976 5004 0 3 98,467,444, 0,98,584, +,+,+, 357125 LINE CR1 585 chr2_NT_458186v1_random 7674 8959 CR1-C4 633 - 7674 8959 0 2 866,383, 0,902, -,-, 357171 LINE CR1 585 chr2_NT_458188v1_random 8346 8586 CR1-X2 632 + 8346 8586 0 2 53,187, 0,53, +,+, 357185 LINE CR1 585 chr2_NT_458192v1_random 1696 2068 (TCC)n 825 + 1696 2068 0 5 22,22,22,28,31, 0,84,167,251,341, +,+,+,+,+, 357207 Simple_repeat Simple_repeat 585 chr2_NT_458192v1_random 4335 4458 (TCC)n 699 + 4335 4458 0 2 28,32, 0,91, +,+, 357209 Simple_repeat Simple_repeat 585 chr2_NT_458192v1_random 8147 8369 GGERVL-C-int 714 + 8147 8369 0 2 54,159, 0,63, +,+, 357212 LTR ERVL 585 chr2_NT_458193v1_random 6702 6979 GGLTR8A 588 - 6702 6979 0 2 198,75, 0,202, -,-, 357219 LTR ERVL 585 chr2_NT_458193v1_random 8316 9416 ENS3-int 521 - 8316 9416 0 3 361,702,36, 0,361,1064, -,-,-, 357221 LTR ERVL 585 chr2_NT_458195v1_random 7933 8813 Mariner1_GG 633 - 7933 8813 0 2 136,744, 0,136, -,-, 357237 DNA TcMar-Mariner 585 chr2_NT_458201v1_random 4453 4953 CR1-E 319 - 4453 4953 0 2 112,376, 0,124, -,-, 357263 LINE CR1 585 chr2_NT_458239v1_random 1272 3524 GGERVL-A-int 724 + 1272 3524 0 4 102,1814,272,59, 0,107,1921,2193, +,+,+,+, 357469 LTR ERVL 585 chr2_NT_458239v1_random 3523 5360 GGLTR3A 869 + 3523 5360 0 2 1309,527, 0,1310, +,+, 357470 LTR ERVL 585 chr2_NT_458243v1_random 6248 6536 CR1-C3 429 + 6248 6536 0 2 151,102, 0,186, +,+, 357499 LINE CR1 585 chr2_NT_458248v1_random 6197 6656 CR1-11_Crp 389 - 6197 6656 0 2 93,167, 0,292, -,-, 357530 LINE CR1 585 chr2_NT_458249v1_random 2916 3801 CR1-D2 314 - 2916 3801 0 2 16,82, 0,803, -,-, 357534 LINE CR1 585 chr2_NT_458258v1_random 3731 3790 (CAGCCA)n 410 + 3731 3790 0 2 19,7, 0,52, +,+, 357601 Simple_repeat Simple_repeat 585 chr2_NT_458264v1_random 2606 3480 GGERVL-A-int 204 + 2606 3480 0 2 234,233, 0,641, +,+, 357628 LTR ERVL 585 chr2_NT_458273v1_random 3891 7119 CR1-D 466 + 3891 7119 0 2 138,344, 0,2884, +,+, 357674 LINE CR1 585 chr2_NT_458275v1_random 2565 3354 CR1-D2 685 + 2565 3354 0 2 589,199, 0,590, +,+, 357689 LINE CR1 585 chr2_NT_458278v1_random 2476 3143 CR1-Y4 472 + 2476 3143 0 2 195,390, 0,277, +,+, 357715 LINE CR1 585 chr2_NT_458279v1_random 5403 6915 CR1-X2 543 - 5403 6915 0 2 889,75, 0,1437, -,-, 357726 LINE CR1 585 chr2_NT_458299v1_random 6425 6911 CR1-C4 422 - 6425 6911 0 2 383,52, 0,434, -,-, 357831 LINE CR1 585 chr2_NT_458303v1_random 3647 4318 GGLTR11-int 432 + 3647 4318 0 2 115,197, 0,474, +,+, 357857 LTR ERV1 585 chr2_NT_458305v1_random 1136 1517 LFSINE_Vert 271 - 1136 1517 0 2 146,80, 0,301, -,-, 357872 SINE tRNA 585 chr2_NT_458307v1_random 2664 3528 GGLTR8B 305 + 2664 3528 0 2 198,168, 0,696, +,+, 357881 LTR ERVL 585 chr2_NT_458310v1_random 6706 7861 CR1-C4 532 + 6706 7861 0 2 911,244, 0,911, +,+, 357906 LINE CR1 585 chr2_NT_458314v1_random 2134 2865 L2-1_AMi 194 + 2134 2865 0 2 99,557, 0,174, +,+, 357922 LINE L2 585 chr2_NT_458317v1_random 2327 2499 Char12Mar1_GG 660 + 2327 2499 0 2 20,111, 0,61, +,+, 357938 DNA hAT-Charlie 585 chr2_NT_458323v1_random 1240 1664 CR1-F2 523 - 1240 1664 0 2 142,209, 0,215, -,-, 357970 LINE CR1 585 chr2_NT_458327v1_random 2746 2847 (T)n 694 + 2746 2847 0 2 24,27, 0,74, +,+, 358006 Simple_repeat Simple_repeat 585 chr2_NT_458330v1_random 159 855 (CCTG)n 513 + 159 855 0 4 206,191,30,214, 0,235,439,482, +,+,+,+, 358013 Simple_repeat Simple_repeat 585 chr2_NT_458330v1_random 1364 2047 (CCTG)n 406 + 1364 2047 0 3 236,144,75, 0,255,608, +,+,+, 358018 Simple_repeat Simple_repeat 585 chr2_NT_458333v1_random 2857 3536 CR1-G 796 + 2857 3536 0 2 58,101, 0,578, +,+, 358035 LINE CR1 585 chr2_NT_458336v1_random 3380 4339 CR1-E 290 + 3380 4339 0 2 159,798, 0,161, +,+, 358049 LINE CR1 585 chr2_NT_458342v1_random 4752 5905 CR1-F2 471 - 4752 5905 0 2 278,620, 0,533, -,-, 358082 LINE CR1 585 chr2_NT_458349v1_random 5223 6338 CR1-Y1_Aves 285 + 5223 6338 0 3 114,270,294, 0,177,821, +,+,+, 358119 LINE CR1 585 chr2_NT_458361v1_random 5081 5167 (A)n 821 + 5081 5167 0 2 20,26, 0,60, +,+, 358191 Simple_repeat Simple_repeat 585 chr2_NT_458366v1_random 6505 6752 CR1-C4 512 + 6505 6752 0 2 128,119, 0,128, +,+, 358225 LINE CR1 585 chr2_NT_458369v1_random 5790 7185 CR1-H 775 - 5790 7185 0 2 319,1076, 0,319, -,-, 358238 LINE CR1 585 chr2_NT_458379v1_random 2441 2572 (TTCCCT)n 490 + 2441 2572 0 2 14,7, 0,124, +,+, 358279 Simple_repeat Simple_repeat 585 chr2_NT_458382v1_random 723 1117 (CTGTG)n 538 + 723 1117 0 2 185,178, 0,216, +,+, 358294 Simple_repeat Simple_repeat 585 chr2_NT_458383v1_random 656 1115 CR1-H 850 + 656 1115 0 2 271,188, 0,271, +,+, 358304 LINE CR1 585 chr2_NT_458412v1_random 5625 6794 CR1-X1 549 + 5625 6794 0 2 985,184, 0,985, +,+, 358452 LINE CR1 585 chr2_NT_458435v1_random 4282 6715 CR1-C4 515 + 4282 6715 0 3 136,1036,103, 0,1256,2330, +,+,+, 358566 LINE CR1 585 chr2_NT_458461v1_random 5704 6497 GGLTR3F1 773 - 5704 6497 0 2 487,306, 0,487, -,-, 358677 LTR ERVL 585 chr2_NT_458462v1_random 2576 3049 GGLTR5A 306 - 2576 3049 0 2 158,241, 0,232, -,-, 358681 LTR ERVL 585 chr2_NT_458471v1_random 4110 5712 CR1-C4 481 + 4110 5712 0 2 198,586, 0,1016, +,+, 358723 LINE CR1 585 chr2_NT_458471v1_random 4312 5037 CR1-F2 655 - 4312 5037 0 2 539,93, 0,632, -,-, 358724 LINE CR1 585 chr2_NT_458477v1_random 152 2385 GGERVL-A-int 699 + 152 2385 0 4 102,1804,289,38, 0,102,1906,2195, +,+,+,+, 358748 LTR ERVL 585 chr2_NT_458477v1_random 2384 4200 GGLTR3A 846 + 2384 4200 0 2 1297,518, 0,1298, +,+, 358749 LTR ERVL 585 chr2_NT_458492v1_random 1411 4740 GGLTR10B 927 - 1411 4740 0 3 383,2561,380, 0,386,2949, -,-,-, 358800 LTR ERVK 585 chr2_NT_458500v1_random 3766 5005 CR1-H 720 - 3766 5005 0 2 1050,189, 0,1050, -,-, 358847 LINE CR1 585 chr2_NT_458500v1_random 5058 5312 CR1-B2 467 + 5058 5312 0 2 118,136, 0,118, +,+, 358848 LINE CR1 585 chr2_NT_458509v1_random 4632 4791 CR1-X2 613 + 4632 4791 0 2 69,56, 0,103, +,+, 358886 LINE CR1 585 chr2_NT_458510v1_random 567 1189 GGLTR5B 322 + 567 1189 0 2 271,322, 0,300, +,+, 358891 LTR ERVL 585 chr2_NT_458528v1_random 498 745 (CAGG)n 499 + 498 745 0 2 198,38, 0,209, +,+, 358965 Simple_repeat Simple_repeat 585 chr2_NT_458528v1_random 5108 5904 CR1-Y 726 - 5108 5904 0 2 507,254, 0,542, -,-, 358971 LINE CR1 585 chr2_NT_458538v1_random 3573 5757 CR1-E 712 - 3573 5757 0 2 1482,594, 0,1590, -,-, 359003 LINE CR1 585 chr2_NT_458539v1_random 2711 5159 CR1-E 796 + 2711 5159 0 2 1487,143, 0,2305, +,+, 359007 LINE CR1 585 chr2_NT_458542v1_random 3800 5136 CR1-X2 513 + 3800 5136 0 2 640,649, 0,687, +,+, 359020 LINE CR1 585 chr2_NT_458553v1_random 1059 2317 CR1-E 338 + 1059 2317 0 2 258,251, 0,1007, +,+, 359065 LINE CR1 585 chr2_NT_458553v1_random 1319 2050 CR1-D2 637 - 1319 2050 0 2 163,202, 0,529, -,-, 359066 LINE CR1 585 chr2_NT_458561v1_random 616 3154 CR1-E 680 + 616 3154 0 2 1473,985, 0,1553, +,+, 359111 LINE CR1 585 chr2_NT_458577v1_random 3091 3266 CR1-Y4 571 + 3091 3266 0 2 89,86, 0,89, +,+, 359174 LINE CR1 585 chr2_NT_458592v1_random 3752 4887 CR1-H2 580 - 3752 4887 0 2 140,995, 0,140, -,-, 359224 LINE CR1 585 chr2_NT_458626v1_random 4496 4597 (T)n 935 + 4496 4597 0 2 33,36, 0,65, +,+, 359338 Simple_repeat Simple_repeat 585 chr2_NT_458632v1_random 1935 2590 CR1-Y2_Aves 304 - 1935 2590 0 2 199,318, 0,337, -,-, 359354 LINE CR1 585 chr2_NT_458653v1_random 1235 3049 GGLTR3A 850 + 1235 3049 0 2 1288,525, 0,1289, +,+, 359420 LTR ERVL 585 chr2_NT_458671v1_random 3199 4383 GGERVL-C-int 828 - 3199 4383 0 2 522,662, 0,522, -,-, 359487 LTR ERVL 585 chr2_NT_458687v1_random 260 360 (ATAT)n 188 + 260 360 0 2 7,48, 0,52, +,+, 359536 Simple_repeat Simple_repeat 585 chr2_NT_458701v1_random 2497 3338 Charlie12_GG 627 - 2497 3338 0 2 56,293, 0,548, -,-, 359572 DNA hAT-Charlie 585 chr2_NT_458701v1_random 3323 4133 CR1-F2 459 + 3323 4133 0 2 703,84, 0,726, +,+, 359574 LINE CR1 585 chr2_NT_458702v1_random 1714 2325 CR1-F2 684 - 1714 2325 0 2 92,519, 0,92, -,-, 359577 LINE CR1 585 chr2_NT_458711v1_random 2672 3973 CR1-C 772 + 2672 3973 0 2 806,135, 0,1166, +,+, 359605 LINE CR1 585 chr2_NT_458740v1_random 704 2657 CR1-L3A_Croc 76 + 704 2657 0 2 799,1137, 0,816, +,+, 359687 LINE CR1 585 chr2_NT_458742v1_random 2338 2703 CR1-L3B_Croc 325 + 2338 2703 0 2 220,131, 0,234, +,+, 359693 LINE CR1 585 chr2_NT_458758v1_random 2420 3713 GGLTR3A 652 + 2420 3713 0 2 564,728, 0,565, +,+, 359727 LTR ERVL 585 chr2_NT_458789v1_random 2581 2990 GGLTR8B 451 - 2581 2990 0 2 89,320, 0,89, -,-, 359814 LTR ERVL 585 chr2_NT_458790v1_random 2544 2627 (T)n 911 + 2544 2627 0 2 24,38, 0,45, +,+, 359816 Simple_repeat Simple_repeat 585 chr2_NT_458803v1_random 1568 1822 (ACCCATAGAG)n 524 + 1568 1822 0 2 118,19, 0,235, +,+, 359848 Satellite Satellite 585 chr2_NT_458803v1_random 2164 3090 (ACCCATAGGG)n 524 - 2164 3090 0 6 138,96,118,44,118,54, 0,252,351,586,630,872, -,-,-,-,-,-, 359851 Satellite Satellite 585 chr2_NT_458812v1_random 1816 2125 Char12Mar1_GG 695 - 1816 2125 0 2 34,275, 0,34, -,-, 359874 DNA hAT-Charlie 585 chr2_NT_458815v1_random 173 692 GGLTR5A 557 - 173 692 0 2 189,78, 0,441, -,-, 359883 LTR ERVL 585 chr2_NT_458841v1_random 1489 2375 GGLTR8B 337 + 1489 2375 0 2 637,221, 0,665, +,+, 359926 LTR ERVL 585 chr2_NT_458851v1_random 687 1373 GGLTR5A 457 + 687 1373 0 2 247,347, 0,339, +,+, 359946 LTR ERVL 585 chr2_NT_458853v1_random 106 427 CR1-C4 491 - 106 427 0 2 54,186, 0,135, -,-, 359955 LINE CR1 585 chr2_NT_458871v1_random 262 539 (ACCCATAGGG)n 634 + 262 539 0 2 117,157, 0,120, +,+, 359999 Satellite Satellite 585 chr2_NT_458871v1_random 718 2056 (ACCCATAGGG)n 602 + 718 2056 0 6 233,119,139,39,495,17, 0,244,375,630,691,1321, +,+,+,+,+,+, 360002 Satellite Satellite 585 chr2_NT_458890v1_random 912 2179 GGXHOI 357 + 912 2179 0 2 1071,178, 0,1089, +,+, 360043 Satellite W-chromosome 585 chr2_NT_459010v1_random 587 930 GGERVL18-int 631 + 587 930 0 2 173,166, 0,177, +,+, 360225 LTR ERVL 585 chr2_NT_459010v1_random 930 2070 GGLTR11 700 - 930 2070 0 2 534,606, 0,534, -,-, 360226 LTR ERV1 585 chr2_NT_459011v1_random 8739 11186 GGLTR3A 769 + 8739 11186 0 2 528,1919, 0,528, +,+, 360232 LTR ERVL 585 chr2_NT_459011v1_random 11186 13470 ENS1-int 795 + 11186 13470 0 2 938,1346, 0,938, +,+, 360233 LTR ERVL 585 chr3 1642 10444 Z-REP 829 + 1642 10444 0 2 154,7897, 0,905, +,+, 360243 Satellite macro 585 chr3 15349 15518 G-rich 439 + 15349 15518 0 2 37,76, 0,93, +,+, 360246 Low_complexity Low_complexity 585 chr3 31701 32061 GGERVK10-int 387 + 31701 32061 0 2 133,59, 0,301, +,+, 360262 LTR ERVK 585 chr3 32441 33292 GGLTR7A 718 + 32441 33292 0 4 42,199,247,347, 0,42,257,504, +,+,+,+, 360263 LTR ERV1 585 chr3 34781 35119 GGLTR7-int 331 - 34781 35119 0 2 87,145, 0,193, -,-, 360265 LTR ERV1 585 chr3 46667 47102 CR1-Y3 661 - 46667 47102 0 2 122,196, 0,239, -,-, 360280 LINE CR1 585 chr3 60497 61248 CR1-C4 664 - 60497 61248 0 2 258,489, 0,262, -,-, 360290 LINE CR1 585 chr3 71336 72442 CR1-Y4 611 + 71336 72442 0 2 349,757, 0,349, +,+, 360293 LINE CR1 586 chr3 235657 236212 CR1-X2 510 - 235657 236212 0 3 197,33,290, 0,197,265, -,-,-, 360365 LINE CR1 586 chr3 246173 249208 CR1-C3 705 + 246173 249208 0 2 1361,1666, 0,1369, +,+, 360370 LINE CR1 587 chr3 324972 326746 CR1-D 650 + 324972 326746 0 2 464,1310, 0,464, +,+, 360406 LINE CR1 587 chr3 363394 363820 CR1-C2 613 - 363394 363820 0 2 142,284, 0,142, -,-, 360420 LINE CR1 588 chr3 462933 464007 CR1-C 825 - 462933 464007 0 2 85,189, 0,885, -,-, 360468 LINE CR1 588 chr3 482723 483378 CR1-D2 653 - 482723 483378 0 2 307,348, 0,307, -,-, 360484 LINE CR1 588 chr3 496278 497328 CR1-D2 631 + 496278 497328 0 2 649,401, 0,649, +,+, 360490 LINE CR1 589 chr3 525455 526469 CR1-C4 653 - 525455 526469 0 2 743,271, 0,743, -,-, 360508 LINE CR1 589 chr3 564352 565687 CR1-D2 520 - 564352 565687 0 2 729,599, 0,736, -,-, 360523 LINE CR1 589 chr3 587776 590017 CR1-D 763 - 587776 590017 0 2 60,222, 0,2019, -,-, 360539 LINE CR1 589 chr3 638668 638968 CR1-F2 550 - 638668 638968 0 2 91,209, 0,91, -,-, 360566 LINE CR1 589 chr3 652968 654096 CR1-C4 520 - 652968 654096 0 3 144,859,125, 0,144,1003, -,-,-, 360579 LINE CR1 590 chr3 693753 694337 GGERV20_I-int 322 - 693753 694337 0 2 235,342, 0,242, -,-, 360595 LTR ERVL 590 chr3 697109 697545 CR1-F 502 + 697109 697545 0 2 339,97, 0,339, +,+, 360598 LINE CR1 590 chr3 740499 740565 (GTTT)n 438 + 740499 740565 0 2 7,7, 0,59, +,+, 360613 Simple_repeat Simple_repeat 590 chr3 742806 742856 (TATT)n 374 + 742806 742856 0 2 6,15, 0,35, +,+, 360618 Simple_repeat Simple_repeat 590 chr3 766165 767008 CR1-H 881 - 766165 767008 0 2 491,351, 0,492, -,-, 360625 LINE CR1 590 chr3 769522 770537 MamRTE1 103 - 769522 770537 0 2 280,518, 0,497, -,-, 360627 LINE RTE-BovB 592 chr3 1005285 1005436 G-rich 461 + 1005285 1005436 0 2 82,29, 0,122, +,+, 360754 Low_complexity Low_complexity 593 chr3 1069339 1073365 CR1-F 893 - 1069339 1073365 0 3 89,2943,830, 0,89,3196, -,-,-, 360792 LINE CR1 594 chr3 1200720 1200893 CR1-Y2_Aves 497 - 1200720 1200893 0 2 107,56, 0,117, -,-, 360872 LINE CR1 594 chr3 1244030 1245452 CR1-F2 684 + 1244030 1245452 0 3 35,618,769, 0,35,653, +,+,+, 360900 LINE CR1 595 chr3 1320394 1321214 CR1-E 776 - 1320394 1321214 0 2 234,586, 0,234, -,-, 360947 LINE CR1 595 chr3 1372755 1374490 UCON2 354 - 1372755 1374490 0 2 135,50, 0,1685, -,-, 360981 DNA? DNA? 598 chr3 1736707 1738402 CR1-L3A_Croc 182 + 1736707 1738402 0 3 652,299,205, 0,931,1490, +,+,+, 361197 LINE CR1 598 chr3 1752823 1754013 CR1-11_Crp 329 - 1752823 1754013 0 2 138,717, 0,473, -,-, 361207 LINE CR1 598 chr3 1763193 1763823 CR1-D 658 - 1763193 1763823 0 2 360,270, 0,360, -,-, 361213 LINE CR1 599 chr3 1865007 1865735 CR1-L3B_Croc 385 - 1865007 1865735 0 3 234,187,96, 0,339,632, -,-,-, 361263 LINE CR1 599 chr3 1957550 1959739 CR1-C4 537 + 1957550 1959739 0 2 1914,238, 0,1951, +,+, 361314 LINE CR1 600 chr3 1974715 1975720 GGERV20_I-int 216 + 1974715 1975720 0 2 208,538, 0,467, +,+, 361323 LTR ERVL 600 chr3 1991092 1993106 CR1-C3 556 - 1991092 1993106 0 2 645,763, 0,1251, -,-, 361333 LINE CR1 600 chr3 1993857 1994641 CR1-D 645 - 1993857 1994641 0 2 623,161, 0,623, -,-, 361334 LINE CR1 600 chr3 2015554 2019555 Char12Mar1_GG 503 - 2015554 2019555 0 3 523,328,405, 0,3099,3596, -,-,-, 361344 DNA hAT-Charlie 600 chr3 2016120 2018654 CR1-F 517 - 2016120 2018654 0 2 2372,162, 0,2372, -,-, 361345 LINE CR1 600 chr3 2048268 2048309 (TGTT)n 574 + 2048268 2048309 0 2 10,6, 0,35, +,+, 361365 Simple_repeat Simple_repeat 600 chr3 2056993 2057790 CR1-F2 518 + 2056993 2057790 0 2 210,587, 0,210, +,+, 361370 LINE CR1 600 chr3 2077764 2079972 Char12Mar1_GG 404 - 2077764 2079972 0 2 1059,295, 0,1913, -,-, 361380 DNA hAT-Charlie 600 chr3 2094211 2094918 CR1-C2 791 - 2094211 2094918 0 2 562,145, 0,562, -,-, 361390 LINE CR1 601 chr3 2097771 2098336 CR1-C3 618 - 2097771 2098336 0 2 202,363, 0,202, -,-, 361394 LINE CR1 601 chr3 2117693 2117918 GGLTR3D 497 + 2117693 2117918 0 2 115,110, 0,115, +,+, 361405 LTR ERVL 601 chr3 2119492 2120278 CR1-D 757 - 2119492 2120278 0 2 603,183, 0,603, -,-, 361407 LINE CR1 601 chr3 2140003 2143909 GGLTR11-int 556 - 2140003 2143909 0 5 193,365,184,551,527, 0,507,918,1680,3379, -,-,-,-,-, 361418 LTR ERV1 601 chr3 2201818 2202285 CR1-D2 583 - 2201818 2202285 0 2 349,118, 0,349, -,-, 361454 LINE CR1 602 chr3 2238110 2240735 CR1-C4 520 + 2238110 2240735 0 4 722,260,183,42, 0,1070,1374,2583, +,+,+,+, 361468 LINE CR1 602 chr3 2250475 2253632 CR1-C4 511 + 2250475 2253632 0 4 1261,260,183,42, 0,1609,1906,3115, +,+,+,+, 361479 LINE CR1 602 chr3 2265444 2265989 CR1-X2 340 - 2265444 2265989 0 2 200,345, 0,200, -,-, 361491 LINE CR1 602 chr3 2323750 2326041 CR1-C 706 - 2323750 2326041 0 2 1705,440, 0,1851, -,-, 361523 LINE CR1 602 chr3 2332678 2334969 CR1-C 706 - 2332678 2334969 0 2 1705,440, 0,1851, -,-, 361527 LINE CR1 603 chr3 2415832 2416630 CR1-D 590 - 2415832 2416630 0 2 145,646, 0,152, -,-, 361572 LINE CR1 603 chr3 2419023 2419723 GGLTR4B 498 - 2419023 2419723 0 2 124,189, 0,511, -,-, 361574 LTR ERVL 603 chr3 2439875 2442248 CR1-C 809 + 2439875 2442248 0 2 763,1610, 0,763, +,+, 361589 LINE CR1 603 chr3 2454258 2457796 ENS3-int 432 - 2454258 2457796 0 4 328,299,413,177, 0,1458,1825,3361, -,-,-,-, 361600 LTR ERVL 603 chr3 2459641 2464400 GGERVL-B-int 751 + 2459641 2464400 0 2 494,4263, 0,496, +,+, 361607 LTR ERVL 603 chr3 2474049 2475466 Sat-CR1_GG 165 + 2474049 2475466 0 3 258,286,699, 0,419,718, +,+,+, 361627 Satellite Satellite 603 chr3 2477034 2477604 CR1-C4 582 - 2477034 2477604 0 2 402,168, 0,402, -,-, 361633 LINE CR1 604 chr3 2525271 2531098 GGERV10_LTR 945 + 2525271 2531098 0 3 220,5386,220, 0,221,5607, +,+,+, 361657 LTR ERVL 604 chr3 2600592 2600699 (A)n 858 + 2600592 2600699 0 2 31,19, 0,88, +,+, 361693 Simple_repeat Simple_repeat 605 chr3 2644347 2644401 (TTTTTC)n 506 + 2644347 2644401 0 2 7,11, 0,43, +,+, 361714 Simple_repeat Simple_repeat 605 chr3 2653591 2653838 CR1-D2 530 - 2653591 2653838 0 2 132,115, 0,132, -,-, 361718 LINE CR1 606 chr3 2844651 2844918 CR1-F2 480 - 2844651 2844918 0 2 52,165, 0,102, -,-, 361817 LINE CR1 607 chr3 2935206 2936921 Char12Mar1_GG 514 - 2935206 2936921 0 2 818,289, 0,1426, -,-, 361865 DNA hAT-Charlie 608 chr3 3106392 3106956 CR1-C4 487 - 3106392 3106956 0 2 136,428, 0,136, -,-, 361927 LINE CR1 609 chr3 3261540 3261855 GGLTR5B 742 + 3261540 3261855 0 2 265,50, 0,265, +,+, 362006 LTR ERVL 610 chr3 3345051 3345432 CR1-C4 648 - 3345051 3345432 0 2 49,332, 0,49, -,-, 362047 LINE CR1 610 chr3 3370577 3370637 (TCCCT)n 332 + 3370577 3370637 0 2 11,10, 0,50, +,+, 362073 Simple_repeat Simple_repeat 611 chr3 3468926 3470077 Mariner1_GG 640 - 3468926 3470077 0 2 735,416, 0,735, -,-, 362176 DNA TcMar-Mariner 611 chr3 3526762 3526833 (G)n 909 + 3526762 3526833 0 2 24,22, 0,49, +,+, 362235 Simple_repeat Simple_repeat 612 chr3 3645990 3646177 A-rich 453 + 3645990 3646177 0 2 51,94, 0,93, +,+, 362301 Low_complexity Low_complexity 612 chr3 3650337 3653133 CR1-F2 578 - 3650337 3653133 0 2 73,203, 0,2593, -,-, 362310 LINE CR1 613 chr3 3724495 3726016 CR1-C4 629 - 3724495 3726016 0 2 220,140, 0,1381, -,-, 362356 LINE CR1 613 chr3 3724905 3725873 CR1-F2 471 - 3724905 3725873 0 2 335,633, 0,335, -,-, 362358 LINE CR1 613 chr3 3754695 3754827 Char12Mar1_GG 688 - 3754695 3754827 0 2 51,79, 0,53, -,-, 362364 DNA hAT-Charlie 614 chr3 3901049 3902245 CR1-C4 610 + 3901049 3902245 0 2 1138,58, 0,1138, +,+, 362421 LINE CR1 615 chr3 3949189 3949733 Charlie12_GGa 550 - 3949189 3949733 0 2 55,114, 0,430, -,-, 362452 DNA hAT-Charlie 615 chr3 3981813 3982577 CR1-C4 591 + 3981813 3982577 0 3 70,403,291, 0,70,473, +,+,+, 362487 LINE CR1 615 chr3 4005332 4006708 CR1-Y4 686 + 4005332 4006708 0 2 873,117, 0,1259, +,+, 362497 LINE CR1 615 chr3 4019025 4019229 CR1-Y4 454 + 4019025 4019229 0 2 149,55, 0,149, +,+, 362507 LINE CR1 616 chr3 4068063 4068998 CR1-C4 618 - 4068063 4068998 0 3 382,424,129, 0,382,806, -,-,-, 362546 LINE CR1 616 chr3 4093707 4098281 CR1-D2 268 - 4093707 4098281 0 2 191,1409, 0,3165, -,-, 362558 LINE CR1 616 chr3 4111217 4111593 GGLTR5A 490 - 4111217 4111593 0 2 74,253, 0,123, -,-, 362563 LTR ERVL 616 chr3 4140531 4141075 Char12Mar1_GG 396 - 4140531 4141075 0 2 168,349, 0,195, -,-, 362576 DNA hAT-Charlie 616 chr3 4187264 4190095 CR1-D2 558 - 4187264 4190095 0 2 194,484, 0,2347, -,-, 362599 LINE CR1 617 chr3 4271442 4272552 GGERVL-B-int 319 + 4271442 4272552 0 2 240,114, 0,996, +,+, 362635 LTR ERVL 617 chr3 4272929 4275337 CR1-C4 549 - 4272929 4275337 0 2 1405,1003, 0,1405, -,-, 362638 LINE CR1 617 chr3 4290245 4291839 CR1-X2 534 - 4290245 4291839 0 2 343,747, 0,847, -,-, 362656 LINE CR1 619 chr3 4525917 4526292 CR1-F2 506 + 4525917 4526292 0 2 140,218, 0,157, +,+, 362763 LINE CR1 619 chr3 4527777 4529186 GGXHOI 456 - 4527777 4529186 0 2 286,1102, 0,307, -,-, 362764 Satellite W-chromosome 619 chr3 4541486 4542591 GGERVL18-int 582 + 4541486 4542591 0 3 525,267,300, 0,534,805, +,+,+, 362771 LTR ERVL 619 chr3 4575664 4579469 CR1-Y4 403 - 4575664 4579469 0 3 951,270,223, 0,3312,3582, -,-,-, 362787 LINE CR1 620 chr3 4608663 4609337 CR1-D2 572 + 4608663 4609337 0 2 118,549, 0,125, +,+, 362812 LINE CR1 620 chr3 4615419 4616362 Char12Mar1_GG 476 - 4615419 4616362 0 2 600,317, 0,626, -,-, 362818 DNA hAT-Charlie 620 chr3 4622636 4623455 CR1-Y3 689 + 4622636 4623455 0 2 265,214, 0,605, +,+, 362819 LINE CR1 621 chr3 4730575 4730838 Mariner1b_GG 716 - 4730575 4730838 0 2 208,55, 0,208, -,-, 362868 DNA TcMar-Mariner 622 chr3 4928046 4928106 (CTTT)n 330 + 4928046 4928106 0 2 10,11, 0,49, +,+, 362929 Simple_repeat Simple_repeat 624 chr3 5214342 5215609 CR1-11_Crp 172 + 5214342 5215609 0 3 536,161,331, 0,732,936, +,+,+, 363038 LINE CR1 625 chr3 5329105 5329146 (CTTT)n 630 + 5329105 5329146 0 2 6,7, 0,34, +,+, 363088 Simple_repeat Simple_repeat 625 chr3 5356247 5357675 CR1-Y2_Aves 43 - 5356247 5357675 0 2 544,581, 0,847, -,-, 363103 LINE CR1 626 chr3 5413207 5414232 CR1-F2 433 + 5413207 5414232 0 2 823,202, 0,823, +,+, 363132 LINE CR1 626 chr3 5447106 5448037 CR1-F2 597 - 5447106 5448037 0 2 283,648, 0,283, -,-, 363146 LINE CR1 626 chr3 5466022 5469625 CR1-C4 629 - 5466022 5469625 0 3 418,95,628, 0,2524,2975, -,-,-, 363157 LINE CR1 626 chr3 5486666 5486960 CR1-D2 474 + 5486666 5486960 0 2 131,133, 0,161, +,+, 363168 LINE CR1 626 chr3 5498758 5498981 CR1-X1 356 - 5498758 5498981 0 2 120,103, 0,120, -,-, 363174 LINE CR1 627 chr3 5588154 5588665 CR1-X2 663 - 5588154 5588665 0 2 373,123, 0,388, -,-, 363221 LINE CR1 628 chr3 5656258 5657221 CR1-F 935 + 5656258 5657221 0 2 566,397, 0,566, +,+, 363256 LINE CR1 628 chr3 5691600 5692564 GGXHOI 423 + 5691600 5692564 0 2 588,334, 0,630, +,+, 363277 Satellite W-chromosome 628 chr3 5693189 5697992 GGXHOI 490 - 5693189 5697992 0 7 356,490,1003,1241,167,963,427, 0,371,899,1921,3181,3376,4376, -,-,-,-,-,-,-, 363279 Satellite W-chromosome 628 chr3 5698132 5700516 GGXHOI 431 - 5698132 5700516 0 3 1370,512,408, 0,1407,1976, -,-,-, 363280 Satellite W-chromosome 628 chr3 5700593 5702950 GGXHOI 446 - 5700593 5702950 0 4 953,775,251,293, 0,1000,1794,2064, -,-,-,-, 363281 Satellite W-chromosome 628 chr3 5703128 5705548 GGXHOI 445 - 5703128 5705548 0 3 607,1327,438, 0,643,1982, -,-,-, 363282 Satellite W-chromosome 628 chr3 5705678 5712490 GGXHOI 446 - 5705678 5712490 0 12 223,605,166,280,512,1004,608,849,984,139,768,293, 0,260,902,1096,1413,1982,3023,3667,4535,5576,5732,6519, -,-,-,-,-,-,-,-,-,-,-,-, 363283 Satellite W-chromosome 628 chr3 5712668 5716973 GGXHOI 439 - 5712668 5716973 0 7 607,189,1074,606,474,927,234, 0,643,870,1981,2623,3116,4071, -,-,-,-,-,-,-, 363284 Satellite W-chromosome 628 chr3 5717110 5719252 GGXHOI 338 - 5717110 5719252 0 3 669,164,1236, 0,693,906, -,-,-, 363285 Satellite W-chromosome 628 chr3 5719405 5720296 GGXHOI 443 - 5719405 5720296 0 2 256,594, 0,297, -,-, 363286 Satellite W-chromosome 628 chr3 5720850 5722279 GGXHOI 404 - 5720850 5722279 0 2 833,580, 0,849, -,-, 363288 Satellite W-chromosome 628 chr3 5725157 5725586 CR1-Y2_Aves 359 - 5725157 5725586 0 2 353,64, 0,365, -,-, 363290 LINE CR1 628 chr3 5743369 5745224 CR1-C4 271 + 5743369 5745224 0 2 1358,338, 0,1517, +,+, 363304 LINE CR1 629 chr3 5783886 5784407 GGLTR8B 225 - 5783886 5784407 0 2 31,213, 0,308, -,-, 363331 LTR ERVL 629 chr3 5815603 5816433 CR1-F2 535 - 5815603 5816433 0 2 313,517, 0,313, -,-, 363348 LINE CR1 629 chr3 5877410 5877945 L2-1_AMi 174 - 5877410 5877945 0 2 299,112, 0,423, -,-, 363384 LINE L2 631 chr3 6047873 6048412 CR1-C4 283 + 6047873 6048412 0 2 122,412, 0,127, +,+, 363490 LINE CR1 631 chr3 6060918 6061132 Char12Mar1_GG 661 - 6060918 6061132 0 2 95,119, 0,95, -,-, 363504 DNA hAT-Charlie 632 chr3 6161072 6161964 CR1-D2 543 - 6161072 6161964 0 2 793,99, 0,793, -,-, 363565 LINE CR1 632 chr3 6188144 6188777 CR1-Y1_Aves 380 + 6188144 6188777 0 2 180,453, 0,180, +,+, 363578 LINE CR1 632 chr3 6222402 6223447 CR1-X 185 + 6222402 6223447 0 2 461,580, 0,465, +,+, 363600 LINE CR1 632 chr3 6256062 6257013 CR1-E 391 + 6256062 6257013 0 3 169,121,320, 0,482,631, +,+,+, 363618 LINE CR1 633 chr3 6293193 6294991 CR1-H 846 + 6293193 6294991 0 2 382,1416, 0,382, +,+, 363641 LINE CR1 633 chr3 6330332 6330939 CR1-X2 422 - 6330332 6330939 0 2 254,353, 0,254, -,-, 363665 LINE CR1 633 chr3 6339542 6340514 CR1-Y1_Aves 362 + 6339542 6340514 0 3 640,79,183, 0,675,789, +,+,+, 363670 LINE CR1 633 chr3 6347591 6348524 CR1-C4 536 - 6347591 6348524 0 3 388,282,263, 0,388,670, -,-,-, 363678 LINE CR1 633 chr3 6376891 6377325 CR1-Y1_Aves 434 + 6376891 6377325 0 2 125,309, 0,125, +,+, 363697 LINE CR1 633 chr3 6378730 6379174 GGLTR8B 577 - 6378730 6379174 0 3 216,167,48, 0,216,396, -,-,-, 363698 LTR ERVL 633 chr3 6381456 6381965 GGLTR8A 404 + 6381456 6381965 0 2 375,113, 0,396, +,+, 363699 LTR ERVL 633 chr3 6398013 6402566 CR1-L3B_Croc 117 - 6398013 6402566 0 3 202,258,381, 0,569,4172, -,-,-, 363716 LINE CR1 634 chr3 6489486 6490181 CR1-F2 299 - 6489486 6490181 0 3 205,190,172, 0,305,523, -,-,-, 363776 LINE CR1 635 chr3 6590471 6591160 GGLTR5A 402 + 6590471 6591160 0 2 262,267, 0,422, +,+, 363847 LTR ERVL 635 chr3 6660361 6660456 (T)n 907 + 6660361 6660456 0 2 17,23, 0,72, +,+, 363887 Simple_repeat Simple_repeat 636 chr3 6725591 6726801 CR1-H2 389 - 6725591 6726801 0 2 640,62, 0,1148, -,-, 363922 LINE CR1 636 chr3 6726234 6726738 ENS1B-LTR 537 + 6726234 6726738 0 2 303,201, 0,303, +,+, 363923 LTR ERVL 636 chr3 6807746 6808676 CR1-C3 640 + 6807746 6808676 0 2 678,209, 0,721, +,+, 363978 LINE CR1 637 chr3 6825991 6827458 CR1-Y 360 - 6825991 6827458 0 2 637,827, 0,640, -,-, 363991 LINE CR1 637 chr3 6865712 6866382 CR1-D2 488 + 6865712 6866382 0 2 310,310, 0,360, +,+, 364013 LINE CR1 637 chr3 6879445 6880081 CR1-Y2_Aves 248 + 6879445 6880081 0 2 174,238, 0,398, +,+, 364019 LINE CR1 638 chr3 6947687 6947729 (TTAT)n 478 + 6947687 6947729 0 2 6,8, 0,34, +,+, 364075 Simple_repeat Simple_repeat 638 chr3 7011175 7013241 X2_LINE 161 + 7011175 7013241 0 2 215,265, 0,1801, +,+, 364106 LINE CR1 639 chr3 7084227 7084273 (CATATAT)n 526 + 7084227 7084273 0 2 10,7, 0,39, +,+, 364146 Simple_repeat Simple_repeat 639 chr3 7178961 7179993 CR1-C3 727 - 7178961 7179993 0 2 116,51, 0,981, -,-, 364200 LINE CR1 639 chr3 7182988 7184293 CR1-H 794 + 7182988 7184293 0 2 1042,263, 0,1042, +,+, 364203 LINE CR1 639 chr3 7194846 7195952 CR1-C4 630 - 7194846 7195952 0 2 237,869, 0,237, -,-, 364209 LINE CR1 640 chr3 7276170 7276853 GGLTR5A 418 + 7276170 7276853 0 3 289,95,159, 0,384,524, +,+,+, 364245 LTR ERVL 640 chr3 7326441 7327643 CR1-X 512 + 7326441 7327643 0 2 1089,110, 0,1092, +,+, 364277 LINE CR1 641 chr3 7340807 7341369 CR1-D2 697 - 7340807 7341369 0 2 498,46, 0,516, -,-, 364281 LINE CR1 641 chr3 7352417 7352934 CR1-C 130 + 7352417 7352934 0 2 231,248, 0,269, +,+, 364289 LINE CR1 641 chr3 7390170 7391203 CR1-Y4 485 + 7390170 7391203 0 2 912,121, 0,912, +,+, 364303 LINE CR1 641 chr3 7441394 7447727 CR1-F2 632 + 7441394 7447727 0 2 78,76, 0,6257, +,+, 364322 LINE CR1 642 chr3 7475620 7475980 CR1-X 387 + 7475620 7475980 0 2 173,171, 0,189, +,+, 364334 LINE CR1 642 chr3 7552263 7554384 CR1-L3B_Croc 272 - 7552263 7554384 0 2 58,200, 0,1921, -,-, 364367 LINE CR1 642 chr3 7563044 7563884 CR1-C3 673 - 7563044 7563884 0 2 623,209, 0,631, -,-, 364373 LINE CR1 642 chr3 7573199 7573785 CR1-X1 316 - 7573199 7573785 0 2 337,230, 0,356, -,-, 364376 LINE CR1 643 chr3 7609090 7609752 GGERVL-C-int 295 - 7609090 7609752 0 2 391,271, 0,391, -,-, 364396 LTR ERVL 643 chr3 7614615 7614726 (T)n 943 + 7614615 7614726 0 2 18,37, 0,74, +,+, 364399 Simple_repeat Simple_repeat 643 chr3 7615793 7615975 CR1-D 668 + 7615793 7615975 0 3 54,56,56, 0,62,126, +,+,+, 364402 LINE CR1 643 chr3 7615983 7618432 CR1-D2 581 + 7615983 7618432 0 2 119,433, 0,2016, +,+, 364403 LINE CR1 643 chr3 7654707 7654993 CR1-X1 416 - 7654707 7654993 0 2 226,60, 0,226, -,-, 364422 LINE CR1 644 chr3 7821388 7821475 A-rich 318 + 7821388 7821475 0 2 17,50, 0,37, +,+, 364493 Low_complexity Low_complexity 644 chr3 7849229 7849702 TguLTR5e 411 + 7849229 7849702 0 2 279,117, 0,356, +,+, 364507 LTR ERVL 645 chr3 7917497 7917803 CR1-X2 543 - 7917497 7917803 0 2 66,240, 0,66, -,-, 364543 LINE CR1 645 chr3 7952984 7953569 CR1-X1 639 - 7952984 7953569 0 2 211,358, 0,227, -,-, 364559 LINE CR1 646 chr3 8009468 8010475 CR1-Y1_Aves 485 + 8009468 8010475 0 2 577,430, 0,577, +,+, 364589 LINE CR1 646 chr3 8062839 8063250 CR1-H2 571 + 8062839 8063250 0 2 330,78, 0,333, +,+, 364613 LINE CR1 646 chr3 8065039 8066298 CR1-C4 440 - 8065039 8066298 0 2 477,736, 0,523, -,-, 364614 LINE CR1 647 chr3 8150432 8150973 CR1-Y2_Aves 191 - 8150432 8150973 0 2 287,251, 0,290, -,-, 364647 LINE CR1 648 chr3 8258122 8258615 CR1-C4 426 + 8258122 8258615 0 2 308,160, 0,333, +,+, 364718 LINE CR1 648 chr3 8343257 8344979 CR1-X1 586 + 8343257 8344979 0 2 508,627, 0,1095, +,+, 364756 LINE CR1 648 chr3 8377006 8377704 CR1-F2 601 - 8377006 8377704 0 2 355,342, 0,356, -,-, 364778 LINE CR1 648 chr3 8382550 8383500 CR1-Y3 652 - 8382550 8383500 0 2 128,815, 0,135, -,-, 364781 LINE CR1 649 chr3 8389685 8389821 CR1-Y2_Aves 492 - 8389685 8389821 0 2 68,67, 0,69, -,-, 364784 LINE CR1 649 chr3 8403822 8404232 GGLTR5B 489 - 8403822 8404232 0 2 168,183, 0,227, -,-, 364790 LTR ERVL 649 chr3 8425934 8426594 REP131 191 - 8425934 8426594 0 2 291,186, 0,474, -,-, 364802 DNA? DNA? 649 chr3 8434645 8434708 (TTTCTTG)n 408 + 8434645 8434708 0 2 7,29, 0,34, +,+, 364808 Simple_repeat Simple_repeat 650 chr3 8549373 8550331 CR1-C4 396 + 8549373 8550331 0 2 338,617, 0,341, +,+, 364849 LINE CR1 650 chr3 8601742 8602344 CR1-D2 657 - 8601742 8602344 0 2 33,258, 0,344, -,-, 364868 LINE CR1 650 chr3 8607468 8608942 CR1-F2 604 - 8607468 8608942 0 2 435,1039, 0,435, -,-, 364870 LINE CR1 650 chr3 8620279 8622301 CR1-Y2_Aves 174 + 8620279 8622301 0 4 393,196,162,975, 0,393,605,1047, +,+,+,+, 364874 LINE CR1 651 chr3 8652711 8653165 TguLTR5e 232 + 8652711 8653165 0 2 250,120, 0,334, +,+, 364890 LTR ERVL 651 chr3 8735577 8735632 (AAT)n 478 + 8735577 8735632 0 2 11,9, 0,46, +,+, 364926 Simple_repeat Simple_repeat 651 chr3 8748400 8748771 GGLTR5A 513 - 8748400 8748771 0 2 72,87, 0,284, -,-, 364938 LTR ERVL 652 chr3 8798931 8800813 CR1-L3A_Croc 213 - 8798931 8800813 0 4 151,193,293,106, 0,808,1339,1776, -,-,-,-, 364959 LINE CR1 652 chr3 8805469 8806210 CR1-X2 521 + 8805469 8806210 0 2 578,151, 0,590, +,+, 364961 LINE CR1 652 chr3 8841487 8841700 TguLTR5e 474 + 8841487 8841700 0 2 60,125, 0,88, +,+, 364969 LTR ERVL 652 chr3 8851988 8852951 Char12Mar1_GG 543 - 8851988 8852951 0 2 124,828, 0,135, -,-, 364975 DNA hAT-Charlie 653 chr3 8936040 8936916 CR1-F2 329 + 8936040 8936916 0 2 18,717, 0,159, +,+, 365026 LINE CR1 653 chr3 8989454 8989921 CR1-C3 675 - 8989454 8989921 0 2 332,135, 0,332, -,-, 365041 LINE CR1 653 chr3 8992901 8994722 CR1-C4 585 - 8992901 8994722 0 2 823,645, 0,1176, -,-, 365044 LINE CR1 653 chr3 9018489 9019095 REP131 168 - 9018489 9019095 0 2 179,151, 0,455, -,-, 365058 DNA? DNA? 654 chr3 9065730 9065788 (TTCTTTT)n 654 + 9065730 9065788 0 2 10,13, 0,45, +,+, 365073 Simple_repeat Simple_repeat 654 chr3 9091819 9093237 CR1-F0 535 - 9091819 9093237 0 2 60,154, 0,1264, -,-, 365080 LINE CR1 654 chr3 9092016 9092361 CR1-F0 489 - 9092016 9092361 0 2 62,278, 0,67, -,-, 365082 LINE CR1 654 chr3 9165997 9166170 CR1-X2 803 - 9165997 9166170 0 2 33,140, 0,33, -,-, 365109 LINE CR1 655 chr3 9229448 9230898 CR1-C4 630 - 9229448 9230898 0 2 220,684, 0,766, -,-, 365136 LINE CR1 656 chr3 9316304 9316665 REP131 367 - 9316304 9316665 0 2 177,125, 0,236, -,-, 365175 DNA? DNA? 656 chr3 9377760 9377829 (CCA)n 969 + 9377760 9377829 0 2 17,33, 0,36, +,+, 365220 Simple_repeat Simple_repeat 659 chr3 9718173 9718449 GGLTR4A 594 - 9718173 9718449 0 2 161,52, 0,224, -,-, 365373 LTR ERVL 659 chr3 9779046 9779083 (ATGAAG)n 564 + 9779046 9779083 0 2 7,9, 0,28, +,+, 365396 Simple_repeat Simple_repeat 660 chr3 9840511 9840604 (GGA)n 875 + 9840511 9840604 0 2 30,24, 0,69, +,+, 365428 Simple_repeat Simple_repeat 660 chr3 9913864 9914899 CR1-Y1_Aves 378 + 9913864 9914899 0 2 62,783, 0,252, +,+, 365471 LINE CR1 661 chr3 9968969 9972104 CR1-F0 530 - 9968969 9972104 0 2 81,192, 0,2943, -,-, 365484 LINE CR1 662 chr3 10135845 10140604 CR1-Y1_Aves 451 + 10135845 10140604 0 3 73,152,97, 0,4493,4662, +,+,+, 365562 LINE CR1 663 chr3 10248177 10249390 MER134 347 - 10248177 10249390 0 2 67,115, 0,1098, -,-, 365603 DNA? DNA? 664 chr3 10394881 10395317 CR1-C4 727 + 10394881 10395317 0 2 366,70, 0,366, +,+, 365672 LINE CR1 664 chr3 10399264 10400403 CR1-D2 588 + 10399264 10400403 0 2 917,222, 0,917, +,+, 365674 LINE CR1 665 chr3 10561027 10561865 REP131 230 - 10561027 10561865 0 2 583,103, 0,735, -,-, 365779 DNA? DNA? 665 chr3 10581422 10581546 A-rich 490 + 10581422 10581546 0 2 11,80, 0,44, +,+, 365801 Low_complexity Low_complexity 667 chr3 10817498 10817633 (T)n 598 + 10817498 10817633 0 2 37,63, 0,72, +,+, 365927 Simple_repeat Simple_repeat 667 chr3 10859830 10859991 Char12Mar1_GG 592 - 10859830 10859991 0 2 102,59, 0,102, -,-, 365960 DNA hAT-Charlie 668 chr3 10908762 10909157 GGLTR4A 634 - 10908762 10909157 0 2 312,83, 0,312, -,-, 365984 LTR ERVL 668 chr3 10931460 10932695 CR1-L3A_Croc 228 + 10931460 10932695 0 2 193,644, 0,591, +,+, 365990 LINE CR1 668 chr3 10952438 10956379 CR1-C 823 + 10952438 10956379 0 2 199,41, 0,3900, +,+, 366003 LINE CR1 670 chr3 11173959 11175108 Char12Mar1_GG 535 - 11173959 11175108 0 3 443,195,216, 0,738,933, -,-,-, 366114 DNA hAT-Charlie 671 chr3 11389266 11390288 CR1-C 806 - 11389266 11390288 0 2 352,670, 0,352, -,-, 366198 LINE CR1 672 chr3 11479528 11479753 CR1-C4 653 - 11479528 11479753 0 2 185,40, 0,185, -,-, 366225 LINE CR1 672 chr3 11524500 11525139 CR1-G 837 + 11524500 11525139 0 2 480,159, 0,480, +,+, 366243 LINE CR1 673 chr3 11620086 11622079 CR1-E 703 + 11620086 11622079 0 2 882,1111, 0,882, +,+, 366276 LINE CR1 674 chr3 11668107 11668773 CR1-F2 493 - 11668107 11668773 0 2 179,485, 0,181, -,-, 366299 LINE CR1 674 chr3 11707869 11715220 GGXHOI 462 - 11707869 11715220 0 6 726,3428,530,942,850,748, 0,749,4193,4775,5738,6603, -,-,-,-,-,-, 366331 Satellite W-chromosome 674 chr3 11717080 11717419 GGXHOI 355 - 11717080 11717419 0 2 113,184, 0,155, -,-, 366335 Satellite W-chromosome 678 chr3 12217426 12220064 GGXHOI 434 - 12217426 12220064 0 2 1964,643, 0,1995, -,-, 366336 Satellite W-chromosome 678 chr3 12287543 12287858 REP131 56 + 12287543 12287858 0 2 100,173, 0,142, +,+, 366369 DNA? DNA? 679 chr3 12349246 12349698 GGLTR5B 388 - 12349246 12349698 0 2 238,87, 0,365, -,-, 366406 LTR ERVL 680 chr3 12469149 12469743 CR1-X1 581 - 12469149 12469743 0 2 294,43, 0,551, -,-, 366460 LINE CR1 680 chr3 12469424 12469703 Char12Mar1_GG 554 - 12469424 12469703 0 2 215,64, 0,215, -,-, 366462 DNA hAT-Charlie 680 chr3 12474423 12475285 CR1-Y1_Aves 422 + 12474423 12475285 0 2 306,556, 0,306, +,+, 366467 LINE CR1 682 chr3 12768981 12769585 CR1-L3B_Croc 175 - 12768981 12769585 0 2 284,212, 0,392, -,-, 366589 LINE CR1 683 chr3 12856538 12857487 CR1-Y2_Aves 107 - 12856538 12857487 0 3 242,286,186, 0,430,763, -,-,-, 366625 LINE CR1 683 chr3 12864515 12866079 CR1-Y3 595 + 12864515 12866079 0 2 1180,140, 0,1424, +,+, 366628 LINE CR1 683 chr3 12883097 12884025 CR1-D 716 + 12883097 12884025 0 2 113,482, 0,446, +,+, 366636 LINE CR1 683 chr3 12902848 12904056 Char12Mar1_GG 567 - 12902848 12904056 0 2 276,931, 0,277, -,-, 366648 DNA hAT-Charlie 683 chr3 12952462 12952535 A-rich 400 + 12952462 12952535 0 2 27,11, 0,62, +,+, 366673 Low_complexity Low_complexity 684 chr3 13100959 13102718 CR1-F2 522 + 13100959 13102718 0 3 211,1249,299, 0,211,1460, +,+,+, 366733 LINE CR1 686 chr3 13279734 13280967 CR1-C3 572 + 13279734 13280967 0 2 341,843, 0,390, +,+, 366811 LINE CR1 687 chr3 13442280 13443473 CR1-Y4 524 - 13442280 13443473 0 2 255,845, 0,348, -,-, 366881 LINE CR1 688 chr3 13561032 13561103 A-rich 396 + 13561032 13561103 0 2 16,16, 0,55, +,+, 366938 Low_complexity Low_complexity 689 chr3 13668016 13668768 CR1-C4 701 + 13668016 13668768 0 2 404,348, 0,404, +,+, 366991 LINE CR1 691 chr3 13913758 13914096 GGERVL-B-int 215 + 13913758 13914096 0 2 86,179, 0,159, +,+, 367086 LTR ERVL 692 chr3 14027541 14027840 CR1-D 709 + 14027541 14027840 0 2 45,228, 0,71, +,+, 367144 LINE CR1 693 chr3 14234525 14234594 (A)n 952 + 14234525 14234594 0 2 22,19, 0,50, +,+, 367237 Simple_repeat Simple_repeat 694 chr3 14299985 14300175 CR1-H2 730 - 14299985 14300175 0 2 81,109, 0,81, -,-, 367268 LINE CR1 694 chr3 14330869 14331276 CR1-C4 602 - 14330869 14331276 0 2 239,168, 0,239, -,-, 367283 LINE CR1 695 chr3 14512378 14513420 CR1-D 663 - 14512378 14513420 0 2 770,272, 0,770, -,-, 367359 LINE CR1 696 chr3 14553827 14554761 CR1-C4 434 + 14553827 14554761 0 2 253,681, 0,253, +,+, 367374 LINE CR1 696 chr3 14558175 14560363 CR1-C4 610 - 14558175 14560363 0 2 750,61, 0,2127, -,-, 367376 LINE CR1 696 chr3 14559258 14560256 CR1-Y4 511 - 14559258 14560256 0 2 942,56, 0,942, -,-, 367378 LINE CR1 696 chr3 14600329 14600502 GGERV22_LTR 733 + 14600329 14600502 0 2 89,84, 0,89, +,+, 367391 LTR ERVL 696 chr3 14613320 14614323 Char12Mar1_GG 585 - 14613320 14614323 0 2 915,85, 0,918, -,-, 367394 DNA hAT-Charlie 697 chr3 14786022 14788716 CR1-C4 491 + 14786022 14788716 0 2 1021,1673, 0,1021, +,+, 367474 LINE CR1 697 chr3 14804678 14807280 CR1-E 704 - 14804678 14807280 0 2 1910,644, 0,1958, -,-, 367484 LINE CR1 698 chr3 14829176 14829215 (GTTT)n 546 + 14829176 14829215 0 2 7,13, 0,26, +,+, 367496 Simple_repeat Simple_repeat 698 chr3 14932903 14932959 (TATATG)n 474 + 14932903 14932959 0 2 14,14, 0,42, +,+, 367558 Simple_repeat Simple_repeat 698 chr3 14935711 14937667 Mariner1_GG 616 - 14935711 14937667 0 2 450,352, 0,1604, -,-, 367560 DNA TcMar-Mariner 87 chr3 14942021 14942679 CR1-D2 715 + 14942021 14942679 0 2 94,559, 0,99, +,+, 367561 LINE CR1 699 chr3 14955973 14956336 CR1-Y2_Aves 411 - 14955973 14956336 0 2 166,175, 0,188, -,-, 367575 LINE CR1 699 chr3 15027399 15027773 CR1-C4 739 + 15027399 15027773 0 2 306,68, 0,306, +,+, 367610 LINE CR1 699 chr3 15045084 15045737 CR1-X1 616 + 15045084 15045737 0 2 478,165, 0,488, +,+, 367617 LINE CR1 699 chr3 15052524 15053434 GGLTR4A 672 + 15052524 15053434 0 2 315,59, 0,851, +,+, 367622 LTR ERVL 699 chr3 15062643 15063893 CR1-C4 583 - 15062643 15063893 0 2 1034,216, 0,1034, -,-, 367626 LINE CR1 699 chr3 15065868 15066558 CR1-C3 503 + 15065868 15066558 0 2 153,537, 0,153, +,+, 367627 LINE CR1 700 chr3 15200930 15201014 A-rich 356 + 15200930 15201014 0 2 40,17, 0,67, +,+, 367711 Low_complexity Low_complexity 702 chr3 15386577 15387022 CR1-Y2_Aves 160 + 15386577 15387022 0 2 191,157, 0,288, +,+, 367762 LINE CR1 702 chr3 15395476 15395919 CR1-F2 472 - 15395476 15395919 0 2 341,102, 0,341, -,-, 367764 LINE CR1 703 chr3 15525375 15527379 CR1-F2 539 + 15525375 15527379 0 2 170,87, 0,1917, +,+, 367822 LINE CR1 706 chr3 15870279 15870584 CR1-X1 711 - 15870279 15870584 0 2 152,137, 0,168, -,-, 367987 LINE CR1 706 chr3 15893671 15894195 CR1-L3B_Croc 328 - 15893671 15894195 0 2 80,78, 0,446, -,-, 368002 LINE CR1 706 chr3 15900200 15900251 (TTTATA)n 448 + 15900200 15900251 0 2 10,9, 0,42, +,+, 368008 Simple_repeat Simple_repeat 706 chr3 15958454 15959398 CR1-Y2_Aves 354 - 15958454 15959398 0 2 136,293, 0,651, -,-, 368031 LINE CR1 707 chr3 16003233 16003461 CR1-F2 540 + 16003233 16003461 0 2 108,109, 0,119, +,+, 368045 LINE CR1 708 chr3 16131077 16131923 Mariner1_GG 464 - 16131077 16131923 0 2 233,613, 0,233, -,-, 368120 DNA TcMar-Mariner 708 chr3 16165657 16175348 Char12Mar1_GG 663 - 16165657 16175348 0 2 256,164, 0,9527, -,-, 368137 DNA hAT-Charlie 708 chr3 16172782 16173700 CR1-D 751 + 16172782 16173700 0 3 169,596,153, 0,169,765, +,+,+, 368142 LINE CR1 708 chr3 16199214 16199324 CR1-D2 722 + 16199214 16199324 0 2 82,28, 0,82, +,+, 368162 LINE CR1 708 chr3 16201179 16202050 GGLTR5B 486 + 16201179 16202050 0 2 406,147, 0,724, +,+, 368164 LTR ERVL 708 chr3 16233032 16233225 GGLTR9 538 - 16233032 16233225 0 2 129,64, 0,129, -,-, 368185 LTR ERVL 710 chr3 16421476 16422081 CR1-D2 533 + 16421476 16422081 0 2 230,375, 0,230, +,+, 368303 LINE CR1 710 chr3 16427626 16427788 CR1-C4 665 - 16427626 16427788 0 2 89,65, 0,97, -,-, 368307 LINE CR1 710 chr3 16484244 16484829 Mariner1b_GG 478 - 16484244 16484829 0 3 331,27,160, 0,373,425, -,-,-, 368321 DNA TcMar-Mariner 712 chr3 16663840 16664493 CR1-X1 588 - 16663840 16664493 0 2 397,256, 0,397, -,-, 368388 LINE CR1 712 chr3 16760983 16761628 CR1-D 617 + 16760983 16761628 0 2 35,585, 0,60, +,+, 368423 LINE CR1 714 chr3 17010198 17011844 CR1-F2 338 - 17010198 17011844 0 2 230,140, 0,1506, -,-, 368541 LINE CR1 89 chr3 17038889 17040193 CR1-D2 523 - 17038889 17040193 0 2 947,355, 0,949, -,-, 368561 LINE CR1 715 chr3 17055410 17055691 CR1-Y2_Aves 326 + 17055410 17055691 0 2 167,113, 0,168, +,+, 368571 LINE CR1 715 chr3 17103707 17104330 CR1-F2 478 + 17103707 17104330 0 2 371,252, 0,371, +,+, 368598 LINE CR1 716 chr3 17261088 17261249 CR1-Y4 403 - 17261088 17261249 0 2 78,83, 0,78, -,-, 368669 LINE CR1 716 chr3 17290469 17290555 A-rich 380 + 17290469 17290555 0 2 44,15, 0,71, +,+, 368682 Low_complexity Low_complexity 717 chr3 17340407 17341949 CR1-Y2_Aves 67 - 17340407 17341949 0 3 446,387,391, 0,456,1151, -,-,-, 368706 LINE CR1 718 chr3 17535874 17536794 CR1-Y2_Aves 247 - 17535874 17536794 0 3 282,207,127, 0,382,793, -,-,-, 368796 LINE CR1 718 chr3 17561086 17561137 (TATGTG)n 406 + 17561086 17561137 0 2 8,18, 0,33, +,+, 368820 Simple_repeat Simple_repeat 719 chr3 17646798 17647211 (TTAGGG)n 484 + 17646798 17647211 0 2 183,196, 0,217, +,+, 368856 Simple_repeat Simple_repeat 719 chr3 17678885 17679477 CR1-F2 380 + 17678885 17679477 0 2 14,544, 0,48, +,+, 368874 LINE CR1 720 chr3 17709163 17709215 (CAA)n 536 + 17709163 17709215 0 2 7,11, 0,41, +,+, 368891 Simple_repeat Simple_repeat 720 chr3 17711219 17711343 (CCGCG)n 330 + 17711219 17711343 0 2 6,45, 0,79, +,+, 368894 Simple_repeat Simple_repeat 720 chr3 17791663 17791970 CR1-Y4 666 - 17791663 17791970 0 2 242,61, 0,246, -,-, 368936 LINE CR1 720 chr3 17797037 17797370 CR1-F2 479 + 17797037 17797370 0 2 156,109, 0,224, +,+, 368939 LINE CR1 721 chr3 17829727 17830138 CR1-X2 316 + 17829727 17830138 0 2 249,162, 0,249, +,+, 368955 LINE CR1 723 chr3 18149951 18154000 CR1-G 805 - 18149951 18154000 0 2 1047,3002, 0,1047, -,-, 369089 LINE CR1 723 chr3 18161807 18162546 CR1-F 415 - 18161807 18162546 0 2 410,321, 0,418, -,-, 369092 LINE CR1 724 chr3 18282689 18283100 GGLTR5A 510 + 18282689 18283100 0 2 250,161, 0,250, +,+, 369140 LTR ERVL 724 chr3 18306810 18307321 CR1-Y2_Aves 475 + 18306810 18307321 0 2 150,361, 0,150, +,+, 369156 LINE CR1 724 chr3 18335062 18335141 (CCCGCC)n 476 + 18335062 18335141 0 2 24,10, 0,69, +,+, 369169 Simple_repeat Simple_repeat 726 chr3 18503085 18503139 (TTTTG)n 494 + 18503085 18503139 0 2 12,11, 0,43, +,+, 369254 Simple_repeat Simple_repeat 726 chr3 18517468 18517997 CR1-L3B_Croc 312 + 18517468 18517997 0 2 183,157, 0,372, +,+, 369262 LINE CR1 726 chr3 18546185 18546532 CR1-C4 727 + 18546185 18546532 0 2 164,183, 0,164, +,+, 369282 LINE CR1 728 chr3 18748469 18748783 CR1-E 748 - 18748469 18748783 0 2 141,171, 0,143, -,-, 369399 LINE CR1 729 chr3 18929403 18929749 CR1-E 702 + 18929403 18929749 0 2 113,233, 0,113, +,+, 369476 LINE CR1 729 chr3 18963358 18963852 CR1-L3B_Croc 246 + 18963358 18963852 0 2 195,120, 0,374, +,+, 369497 LINE CR1 730 chr3 19131105 19133631 CR1-E 468 - 19131105 19133631 0 3 219,629,141, 0,220,2385, -,-,-, 369603 LINE CR1 731 chr3 19183274 19183411 CR1-D2 655 - 19183274 19183411 0 2 87,50, 0,87, -,-, 369633 LINE CR1 731 chr3 19194689 19195840 CR1-D2 594 - 19194689 19195840 0 3 115,888,148, 0,115,1003, -,-,-, 369637 LINE CR1 731 chr3 19202226 19203640 CR1-Y2_Aves 354 - 19202226 19203640 0 3 127,341,917, 0,143,497, -,-,-, 369643 LINE CR1 732 chr3 19372596 19372731 (T)n 635 + 19372596 19372731 0 2 25,83, 0,52, +,+, 369754 Simple_repeat Simple_repeat 733 chr3 19527807 19528062 REP131 374 - 19527807 19528062 0 2 127,98, 0,157, -,-, 369853 DNA? DNA? 734 chr3 19547062 19549113 GGERVL18-int 623 + 19547062 19549113 0 4 292,447,598,124, 0,318,1329,1927, +,+,+,+, 369870 LTR ERVL 734 chr3 19547830 19548391 GGLTR10D-int 870 + 19547830 19548391 0 2 194,364, 0,197, +,+, 369871 LTR ERVK 734 chr3 19659204 19659938 CR1-E 534 - 19659204 19659938 0 2 263,471, 0,263, -,-, 369946 LINE CR1 736 chr3 19855586 19856015 Char12Mar1_GG 589 - 19855586 19856015 0 2 132,297, 0,132, -,-, 370056 DNA hAT-Charlie 736 chr3 19856803 19856853 (TCTTT)n 702 + 19856803 19856853 0 2 7,6, 0,44, +,+, 370057 Simple_repeat Simple_repeat 736 chr3 19858943 19860132 CR1-C4 514 + 19858943 19860132 0 2 790,399, 0,790, +,+, 370062 LINE CR1 737 chr3 19950668 19950771 (TTTT)n 456 + 19950668 19950771 0 2 29,53, 0,50, +,+, 370110 Simple_repeat Simple_repeat 739 chr3 20207735 20207802 (CCGCGCG)n 468 + 20207735 20207802 0 2 6,30, 0,37, +,+, 370255 Simple_repeat Simple_repeat 740 chr3 20383011 20384629 CR1-F 831 - 20383011 20384629 0 2 871,746, 0,872, -,-, 370333 LINE CR1 741 chr3 20459247 20459344 (T)n 900 + 20459247 20459344 0 2 32,24, 0,73, +,+, 370376 Simple_repeat Simple_repeat 741 chr3 20468178 20468279 A-rich 687 + 20468178 20468279 0 2 36,29, 0,72, +,+, 370384 Low_complexity Low_complexity 741 chr3 20486070 20486146 (GTAT)n 354 + 20486070 20486146 0 2 11,15, 0,61, +,+, 370394 Simple_repeat Simple_repeat 741 chr3 20498210 20498607 GGLTR5B 385 + 20498210 20498607 0 2 181,214, 0,183, +,+, 370408 LTR ERVL 742 chr3 20595189 20596041 CR1-X1 503 - 20595189 20596041 0 3 211,73,568, 0,211,284, -,-,-, 370465 LINE CR1 742 chr3 20622136 20635086 Char12Mar1_GG 580 - 20622136 20635086 0 2 51,534, 0,12416, -,-, 370477 DNA hAT-Charlie 743 chr3 20776672 20776975 CR1-C 808 - 20776672 20776975 0 2 69,202, 0,101, -,-, 370555 LINE CR1 743 chr3 20824275 20825062 CR1-Y2_Aves 337 - 20824275 20825062 0 3 66,99,291, 0,207,496, -,-,-, 370587 LINE CR1 744 chr3 20841075 20841653 CR1-D2 669 + 20841075 20841653 0 2 432,146, 0,432, +,+, 370595 LINE CR1 744 chr3 20938550 20938615 (GGC)n 412 + 20938550 20938615 0 2 33,9, 0,56, +,+, 370649 Simple_repeat Simple_repeat 745 chr3 20992071 20992293 CR1-Y1_Aves 417 + 20992071 20992293 0 2 93,129, 0,93, +,+, 370677 LINE CR1 746 chr3 21227130 21228387 CR1-H 720 + 21227130 21228387 0 2 632,625, 0,632, +,+, 370779 LINE CR1 93 chr3 21233401 21234549 CR1-L3B_Croc 147 - 21233401 21234549 0 2 262,877, 0,271, -,-, 370784 LINE CR1 747 chr3 21297068 21297686 UCON1 264 + 21297068 21297686 0 2 120,287, 0,331, +,+, 370814 Unknown Unknown 748 chr3 21408205 21408750 CR1-C4 516 - 21408205 21408750 0 2 67,478, 0,67, -,-, 370885 LINE CR1 748 chr3 21465740 21467327 CR1-L3A_Croc 334 - 21465740 21467327 0 3 298,143,598, 0,734,989, -,-,-, 370923 LINE CR1 749 chr3 21555558 21556056 CR1-C4 583 + 21555558 21556056 0 2 89,409, 0,89, +,+, 370978 LINE CR1 750 chr3 21632459 21633940 CR1-11_Crp 186 - 21632459 21633940 0 2 93,600, 0,881, -,-, 371026 LINE CR1 750 chr3 21750244 21751448 CR1-X 209 - 21750244 21751448 0 3 126,370,679, 0,130,525, -,-,-, 371064 LINE CR1 751 chr3 21824922 21826903 CR1-Y4 654 - 21824922 21826903 0 2 88,275, 0,1706, -,-, 371089 LINE CR1 751 chr3 21827403 21828004 CR1-D2 664 - 21827403 21828004 0 2 72,529, 0,72, -,-, 371091 LINE CR1 751 chr3 21833552 21834604 CR1-Y2_Aves 294 + 21833552 21834604 0 2 275,727, 0,325, +,+, 371097 LINE CR1 752 chr3 21922757 21924198 CR1-F2 499 - 21922757 21924198 0 3 488,461,113, 0,488,1328, -,-,-, 371145 LINE CR1 752 chr3 21924217 21924639 CR1-Y2_Aves 291 - 21924217 21924639 0 2 86,244, 0,178, -,-, 371146 LINE CR1 752 chr3 21929295 21930351 CR1-L3B_Croc 177 - 21929295 21930351 0 3 175,87,319, 0,257,737, -,-,-, 371147 LINE CR1 753 chr3 22130180 22130971 CR1-Y2_Aves 306 - 22130180 22130971 0 2 571,214, 0,577, -,-, 371217 LINE CR1 754 chr3 22166357 22166810 CR1-11_Crp 251 + 22166357 22166810 0 2 211,151, 0,302, +,+, 371237 LINE CR1 754 chr3 22211817 22212757 CR1-X1 656 - 22211817 22212757 0 2 57,878, 0,62, -,-, 371257 LINE CR1 755 chr3 22403024 22403512 TguLTR5e 462 - 22403024 22403512 0 2 148,270, 0,218, -,-, 371344 LTR ERVL 757 chr3 22609782 22611894 CR1-E 725 + 22609782 22611894 0 2 83,245, 0,1867, +,+, 371419 LINE CR1 757 chr3 22611953 22612271 CR1-Y2_Aves 403 - 22611953 22612271 0 2 95,204, 0,114, -,-, 371420 LINE CR1 758 chr3 22735249 22735742 GGLTR8B 345 + 22735249 22735742 0 2 286,196, 0,297, +,+, 371466 LTR ERVL 758 chr3 22784583 22784808 GGLTR5B 471 - 22784583 22784808 0 2 126,99, 0,126, -,-, 371497 LTR ERVL 758 chr3 22798543 22799240 Mariner1_GG 616 - 22798543 22799240 0 2 573,122, 0,575, -,-, 371505 DNA TcMar-Mariner 759 chr3 22903059 22903771 GGLTR5A 377 - 22903059 22903771 0 2 206,323, 0,389, -,-, 371543 LTR ERVL 759 chr3 22933813 22935458 CR1-X 639 - 22933813 22935458 0 2 1186,459, 0,1186, -,-, 371556 LINE CR1 761 chr3 23097430 23099749 CR1-G 794 - 23097430 23099749 0 2 959,1327, 0,992, -,-, 371646 LINE CR1 761 chr3 23110812 23111853 CR1-X 581 - 23110812 23111853 0 2 920,118, 0,923, -,-, 371653 LINE CR1 762 chr3 23288699 23289518 CR1-X1 477 - 23288699 23289518 0 2 334,457, 0,362, -,-, 371747 LINE CR1 762 chr3 23323981 23324117 CR1-F2 679 + 23323981 23324117 0 2 45,85, 0,51, +,+, 371764 LINE CR1 763 chr3 23361491 23361912 Mariner1b_GG 630 - 23361491 23361912 0 2 334,87, 0,334, -,-, 371786 DNA TcMar-Mariner 763 chr3 23403360 23403974 CR1-D2 606 - 23403360 23403974 0 2 463,151, 0,463, -,-, 371807 LINE CR1 763 chr3 23447130 23447466 Char12Mar1_GG 756 - 23447130 23447466 0 2 112,224, 0,112, -,-, 371827 DNA hAT-Charlie 765 chr3 23693843 23695135 CR1-B2 869 - 23693843 23695135 0 2 617,327, 0,965, -,-, 371960 LINE CR1 766 chr3 23743885 23744569 REP131 368 - 23743885 23744569 0 2 74,152, 0,532, -,-, 371989 DNA? DNA? 766 chr3 23807769 23809176 CR1-G 823 - 23807769 23809176 0 2 551,854, 0,553, -,-, 372030 LINE CR1 768 chr3 24024459 24025090 CR1-B2 171 + 24024459 24025090 0 2 378,104, 0,527, +,+, 372160 LINE CR1 768 chr3 24030517 24031144 CR1-Y2_Aves 192 - 24030517 24031144 0 2 314,277, 0,350, -,-, 372162 LINE CR1 768 chr3 24034190 24037351 CR1-H2 533 - 24034190 24037351 0 3 65,530,51, 0,2580,3110, -,-,-, 372164 LINE CR1 768 chr3 24054328 24054904 CR1-X1 630 - 24054328 24054904 0 2 470,101, 0,475, -,-, 372182 LINE CR1 768 chr3 24085122 24085755 GGLTR5A 453 + 24085122 24085755 0 2 510,95, 0,538, +,+, 372197 LTR ERVL 771 chr3 24457345 24457598 CR1-Y4 581 - 24457345 24457598 0 2 94,66, 0,187, -,-, 372402 LINE CR1 772 chr3 24540861 24540948 (TGTA)n 332 + 24540861 24540948 0 2 16,50, 0,37, +,+, 372438 Simple_repeat Simple_repeat 772 chr3 24605081 24605143 (TCT)n 354 + 24605081 24605143 0 2 10,20, 0,42, +,+, 372481 Simple_repeat Simple_repeat 772 chr3 24611638 24612245 GGLTR4A 408 + 24611638 24612245 0 2 241,94, 0,513, +,+, 372488 LTR ERVL 772 chr3 24623550 24627823 CR1-G 710 - 24623550 24627823 0 2 1750,1439, 0,2834, -,-, 372497 LINE CR1 773 chr3 24642192 24647570 CR1-H2 580 - 24642192 24647570 0 2 74,47, 0,5331, -,-, 372507 LINE CR1 774 chr3 24847551 24848072 TguLTR5e 369 - 24847551 24848072 0 2 234,219, 0,302, -,-, 372591 LTR ERVL 776 chr3 25061695 25062520 REP131 312 - 25061695 25062520 0 2 661,50, 0,775, -,-, 372678 DNA? DNA? 776 chr3 25119829 25120540 CR1-F2 408 - 25119829 25120540 0 2 371,335, 0,376, -,-, 372699 LINE CR1 777 chr3 25259872 25260405 CR1-C4 574 - 25259872 25260405 0 2 106,424, 0,109, -,-, 372741 LINE CR1 777 chr3 25265849 25265937 (TATTTA)n 420 + 25265849 25265937 0 2 6,36, 0,52, +,+, 372745 Simple_repeat Simple_repeat 777 chr3 25280217 25280646 REP131 248 - 25280217 25280646 0 2 155,259, 0,170, -,-, 372750 DNA? DNA? 778 chr3 25333620 25333673 (TTTCC)n 460 + 25333620 25333673 0 2 14,11, 0,42, +,+, 372771 Simple_repeat Simple_repeat 779 chr3 25457418 25457869 CR1-X1 578 - 25457418 25457869 0 2 343,86, 0,365, -,-, 372806 LINE CR1 779 chr3 25508412 25508615 Char12Mar1_GG 692 - 25508412 25508615 0 2 108,92, 0,111, -,-, 372828 DNA hAT-Charlie 780 chr3 25647053 25647537 REP131 68 - 25647053 25647537 0 2 247,209, 0,275, -,-, 372890 DNA? DNA? 781 chr3 25695477 25696467 CR1-L3A_Croc 250 - 25695477 25696467 0 3 273,82,288, 0,542,702, -,-,-, 372932 LINE CR1 782 chr3 25832195 25832526 GGLTR5A 495 + 25832195 25832526 0 2 94,60, 0,271, +,+, 373007 LTR ERVL 784 chr3 26200527 26200586 (ACAA)n 376 + 26200527 26200586 0 2 32,8, 0,51, +,+, 373252 Simple_repeat Simple_repeat 785 chr3 26262732 26262830 A-rich 528 + 26262732 26262830 0 2 36,48, 0,50, +,+, 373278 Low_complexity Low_complexity 785 chr3 26289165 26289600 Char12Mar1_GG 649 - 26289165 26289600 0 2 31,397, 0,38, -,-, 373296 DNA hAT-Charlie 785 chr3 26298068 26298598 GGLTR3F1 938 - 26298068 26298598 0 2 494,36, 0,494, -,-, 373301 LTR ERVL 785 chr3 26298598 26304414 GGLTR3F1 901 - 26298598 26304414 0 2 5321,494, 0,5322, -,-, 373302 LTR ERVL 786 chr3 26382487 26382911 Char12Mar1_GG 485 - 26382487 26382911 0 2 222,201, 0,223, -,-, 373346 DNA hAT-Charlie 786 chr3 26420187 26420418 CR1-Y 837 + 26420187 26420418 0 2 61,170, 0,61, +,+, 373361 LINE CR1 786 chr3 26421474 26421747 CR1-Y4 426 + 26421474 26421747 0 2 141,89, 0,184, +,+, 373363 LINE CR1 787 chr3 26528972 26529565 CR1-E 721 + 26528972 26529565 0 2 329,264, 0,329, +,+, 373412 LINE CR1 788 chr3 26630840 26631252 CR1-C4 474 - 26630840 26631252 0 2 193,219, 0,193, -,-, 373469 LINE CR1 788 chr3 26691181 26691617 CR1-C4 729 - 26691181 26691617 0 2 69,367, 0,69, -,-, 373490 LINE CR1 791 chr3 27001142 27001612 REP131 0 + 27001142 27001612 0 2 82,317, 0,153, +,+, 373639 DNA? DNA? 791 chr3 27061338 27061812 CR1-Y2_Aves 398 + 27061338 27061812 0 3 155,121,177, 0,172,297, +,+,+, 373665 LINE CR1 792 chr3 27164249 27164324 (TGTTTTT)n 548 + 27164249 27164324 0 2 24,18, 0,57, +,+, 373703 Simple_repeat Simple_repeat 794 chr3 27417953 27419692 TguLTR5e 479 + 27417953 27419692 0 2 35,535, 0,1204, +,+, 373805 LTR ERVL 794 chr3 27417984 27419159 CR1-D2 647 - 27417984 27419159 0 2 318,857, 0,318, -,-, 373806 LINE CR1 795 chr3 27526827 27529756 GGERVL18-int 645 + 27526827 27529756 0 4 316,310,1989,291, 0,339,649,2638, +,+,+,+, 373850 LTR ERVL 795 chr3 27607332 27609136 CR1-G 751 + 27607332 27609136 0 2 291,1513, 0,291, +,+, 373876 LINE CR1 795 chr3 27641195 27641982 CR1-C4 554 - 27641195 27641982 0 2 234,518, 0,269, -,-, 373890 LINE CR1 797 chr3 27889328 27890753 CR1-F0 104 - 27889328 27890753 0 2 531,844, 0,581, -,-, 374019 LINE CR1 798 chr3 27920804 27921490 GGLTR5B 413 + 27920804 27921490 0 2 59,500, 0,186, +,+, 374029 LTR ERVL 798 chr3 27937265 27938595 CR1-F2 157 - 27937265 27938595 0 2 181,234, 0,1096, -,-, 374043 LINE CR1 798 chr3 28010162 28010214 (CCTCT)n 536 + 28010162 28010214 0 2 8,10, 0,42, +,+, 374079 Simple_repeat Simple_repeat 799 chr3 28095758 28096262 CR1-C4 603 - 28095758 28096262 0 2 207,297, 0,207, -,-, 374120 LINE CR1 799 chr3 28101680 28102584 CR1-L3B_Croc 363 + 28101680 28102584 0 2 619,136, 0,768, +,+, 374130 LINE CR1 800 chr3 28269420 28269903 GGLTR8B 520 + 28269420 28269903 0 2 347,136, 0,347, +,+, 374213 LTR ERVL 801 chr3 28392785 28393278 CR1-X2 620 + 28392785 28393278 0 2 425,67, 0,426, +,+, 374286 LINE CR1 802 chr3 28491400 28491749 CR1-E 491 + 28491400 28491749 0 2 136,213, 0,136, +,+, 374354 LINE CR1 802 chr3 28535358 28537333 CR1-L3A_Croc 136 - 28535358 28537333 0 2 346,261, 0,1714, -,-, 374377 LINE CR1 803 chr3 28647812 28649572 CR1-F2 458 + 28647812 28649572 0 2 731,921, 0,839, +,+, 374450 LINE CR1 804 chr3 28726005 28726811 CR1-Y2_Aves 94 + 28726005 28726811 0 2 300,478, 0,328, +,+, 374493 LINE CR1 804 chr3 28748284 28748659 GGLTR4A 731 - 28748284 28748659 0 2 115,240, 0,135, -,-, 374505 LTR ERVL 804 chr3 28759111 28759889 CR1-E 650 - 28759111 28759889 0 2 279,147, 0,631, -,-, 374512 LINE CR1 804 chr3 28778290 28779203 CR1-X2 532 - 28778290 28779203 0 4 75,114,268,110, 0,87,534,803, -,-,-,-, 374524 LINE CR1 804 chr3 28781006 28781136 CR1-X2 676 + 28781006 28781136 0 2 95,35, 0,95, +,+, 374528 LINE CR1 805 chr3 28928502 28929373 CR1-E 725 + 28928502 28929373 0 2 323,548, 0,323, +,+, 374597 LINE CR1 806 chr3 28973063 28973489 GGLTR5A 399 - 28973063 28973489 0 2 88,332, 0,94, -,-, 374619 LTR ERVL 806 chr3 28985290 28987343 CR1-Y2_Aves 297 - 28985290 28987343 0 3 560,855,631, 0,560,1422, -,-,-, 374627 LINE CR1 806 chr3 29013086 29013233 A-rich 436 + 29013086 29013233 0 2 51,73, 0,74, +,+, 374637 Low_complexity Low_complexity 806 chr3 29023488 29024632 CR1-Y2_Aves 354 + 29023488 29024632 0 4 497,397,67,114, 0,518,944,1030, +,+,+,+, 374646 LINE CR1 806 chr3 29080870 29081363 CR1-Y4 513 + 29080870 29081363 0 2 230,177, 0,316, +,+, 374678 LINE CR1 806 chr3 29096104 29096681 CR1-Y1_Aves 551 - 29096104 29096681 0 2 298,213, 0,364, -,-, 374684 LINE CR1 807 chr3 29112462 29112707 AmnSINE1 369 - 29112462 29112707 0 2 104,105, 0,140, -,-, 374698 SINE 5S-Deu-L2 807 chr3 29134591 29135170 CR1-D2 685 - 29134591 29135170 0 2 98,66, 0,513, -,-, 374712 LINE CR1 807 chr3 29177583 29177645 (A)n 896 + 29177583 29177645 0 2 19,22, 0,40, +,+, 374733 Simple_repeat Simple_repeat 807 chr3 29196626 29197635 CR1-C3 611 + 29196626 29197635 0 2 654,355, 0,654, +,+, 374747 LINE CR1 807 chr3 29222692 29223440 CR1-Y1_Aves 215 + 29222692 29223440 0 2 231,195, 0,553, +,+, 374764 LINE CR1 808 chr3 29238382 29238524 (AT)n 310 + 29238382 29238524 0 2 72,8, 0,134, +,+, 374771 Simple_repeat Simple_repeat 808 chr3 29335250 29335304 (ATAC)n 342 + 29335250 29335304 0 2 18,15, 0,39, +,+, 374816 Simple_repeat Simple_repeat 809 chr3 29433359 29434324 Char12Mar1_GG 556 - 29433359 29434324 0 2 253,339, 0,626, -,-, 374866 DNA hAT-Charlie 810 chr3 29585697 29585901 CR1-X2 439 + 29585697 29585901 0 2 46,158, 0,46, +,+, 374976 LINE CR1 811 chr3 29684534 29684936 CR1-H2 797 + 29684534 29684936 0 2 131,271, 0,131, +,+, 375033 LINE CR1 813 chr3 29929676 29930296 CR1-L3B_Croc 196 + 29929676 29930296 0 2 329,223, 0,397, +,+, 375144 LINE CR1 814 chr3 30119196 30119885 CR1-11_Crp 253 + 30119196 30119885 0 2 324,324, 0,365, +,+, 375239 LINE CR1 815 chr3 30153135 30153493 AmnSINE1 278 + 30153135 30153493 0 2 117,147, 0,211, +,+, 375255 SINE 5S-Deu-L2 816 chr3 30291122 30291519 CR1-Y2_Aves 208 - 30291122 30291519 0 2 238,159, 0,238, -,-, 375322 LINE CR1 818 chr3 30605774 30606047 CR1-L3A_Croc 241 + 30605774 30606047 0 2 148,89, 0,184, +,+, 375462 LINE CR1 818 chr3 30650064 30653172 CR1-L3B_Croc 138 + 30650064 30653172 0 3 176,808,228, 0,1369,2880, +,+,+, 375491 LINE CR1 818 chr3 30650328 30651390 CR1-L3B_Croc 239 + 30650328 30651390 0 2 278,621, 0,441, +,+, 375492 LINE CR1 819 chr3 30766830 30769472 CR1-L3A_Croc 99 + 30766830 30769472 0 3 541,251,617, 0,1522,2025, +,+,+, 375572 LINE CR1 820 chr3 30897887 30899479 CR1-L3B_Croc 213 - 30897887 30899479 0 2 651,493, 0,1099, -,-, 375641 LINE CR1 822 chr3 31186000 31186957 CR1-G 819 + 31186000 31186957 0 2 464,493, 0,464, +,+, 375741 LINE CR1 824 chr3 31371853 31372938 CR1-Y2_Aves 171 + 31371853 31372938 0 2 732,176, 0,909, +,+, 375828 LINE CR1 825 chr3 31488849 31489601 CR1-D 747 + 31488849 31489601 0 2 361,391, 0,361, +,+, 375876 LINE CR1 825 chr3 31579868 31580785 CR1-Y2_Aves 173 - 31579868 31580785 0 2 369,364, 0,553, -,-, 375928 LINE CR1 826 chr3 31605621 31611447 GGERV10_LTR 982 + 31605621 31611447 0 3 220,5385,220, 0,221,5606, +,+,+, 375938 LTR ERVL 827 chr3 31826511 31827686 CR1-D2 661 - 31826511 31827686 0 2 883,277, 0,898, -,-, 376029 LINE CR1 828 chr3 31862020 31863131 CR1-L3B_Croc 229 - 31862020 31863131 0 2 383,97, 0,1014, -,-, 376044 LINE CR1 828 chr3 31924786 31925199 CR1-Y4 440 + 31924786 31925199 0 2 291,122, 0,291, +,+, 376072 LINE CR1 829 chr3 32020041 32021297 CR1-C4 433 - 32020041 32021297 0 3 139,244,247, 0,139,1009, -,-,-, 376121 LINE CR1 829 chr3 32020426 32021052 CR1-C4 652 + 32020426 32021052 0 2 324,302, 0,324, +,+, 376122 LINE CR1 830 chr3 32146953 32148203 CR1-Y2_Aves 154 + 32146953 32148203 0 4 180,197,271,369, 0,222,573,881, +,+,+,+, 376192 LINE CR1 831 chr3 32286769 32287179 CR1-F2 568 - 32286769 32287179 0 2 355,48, 0,362, -,-, 376258 LINE CR1 832 chr3 32400026 32400565 CR1-Y2_Aves 270 + 32400026 32400565 0 2 206,287, 0,252, +,+, 376325 LINE CR1 832 chr3 32441015 32441859 CR1-C4 613 + 32441015 32441859 0 2 53,56, 0,788, +,+, 376353 LINE CR1 832 chr3 32476606 32477142 CR1-C4 671 - 32476606 32477142 0 2 50,486, 0,50, -,-, 376375 LINE CR1 832 chr3 32483294 32484730 CR1-Y2_Aves 167 + 32483294 32484730 0 5 624,16,20,148,335, 0,701,796,889,1101, +,+,+,+,+, 376377 LINE CR1 832 chr3 32493476 32493556 (TTGT)n 402 + 32493476 32493556 0 2 8,32, 0,48, +,+, 376386 Simple_repeat Simple_repeat 833 chr3 32527463 32527540 (AGCGCC)n 296 + 32527463 32527540 0 2 23,29, 0,48, +,+, 376405 Simple_repeat Simple_repeat 833 chr3 32584535 32584854 CR1-X 617 + 32584535 32584854 0 2 198,121, 0,198, +,+, 376443 LINE CR1 833 chr3 32587718 32588981 CR1-L3A_Croc 207 + 32587718 32588981 0 2 802,160, 0,1103, +,+, 376445 LINE CR1 834 chr3 32681696 32683215 CR1-C4 565 - 32681696 32683215 0 2 60,705, 0,814, -,-, 376499 LINE CR1 835 chr3 32796840 32797308 CR1-C4 658 - 32796840 32797308 0 2 56,410, 0,58, -,-, 376578 LINE CR1 835 chr3 32860053 32860689 CR1-Y2_Aves 249 - 32860053 32860689 0 2 277,341, 0,295, -,-, 376615 LINE CR1 836 chr3 32901235 32904754 CR1-C2 353 - 32901235 32904754 0 2 42,272, 0,3247, -,-, 376635 LINE CR1 836 chr3 32952739 32953026 Char12Mar1_GG 438 - 32952739 32953026 0 2 73,214, 0,73, -,-, 376657 DNA hAT-Charlie 837 chr3 33131760 33132471 CR1-X2 492 + 33131760 33132471 0 3 118,197,70, 0,118,641, +,+,+, 376767 LINE CR1 838 chr3 33204797 33205609 CR1-11_Crp 256 - 33204797 33205609 0 2 163,404, 0,408, -,-, 376811 LINE CR1 838 chr3 33218635 33219141 Char12Mar1_GG 593 - 33218635 33219141 0 2 144,338, 0,168, -,-, 376819 DNA hAT-Charlie 838 chr3 33234148 33235226 CR1-11_Crp 165 + 33234148 33235226 0 2 464,91, 0,987, +,+, 376832 LINE CR1 838 chr3 33258523 33259397 CR1-F2 557 + 33258523 33259397 0 2 676,198, 0,676, +,+, 376841 LINE CR1 839 chr3 33292618 33292672 (TTTTC)n 448 + 33292618 33292672 0 2 21,6, 0,48, +,+, 376860 Simple_repeat Simple_repeat 839 chr3 33383659 33384252 GGLTR3A 914 + 33383659 33384252 0 2 522,71, 0,522, +,+, 376910 LTR ERVL 840 chr3 33440869 33441229 CR1-X2 447 - 33440869 33441229 0 2 248,112, 0,248, -,-, 376930 LINE CR1 840 chr3 33474310 33474523 CR1-D2 763 + 33474310 33474523 0 2 62,139, 0,74, +,+, 376938 LINE CR1 840 chr3 33474518 33477916 CR1-Y4 419 + 33474518 33477916 0 2 404,619, 0,2779, +,+, 376939 LINE CR1 841 chr3 33558107 33558770 CR1-F 573 + 33558107 33558770 0 2 249,414, 0,249, +,+, 376987 LINE CR1 842 chr3 33729080 33729540 GGLTR3C1 389 + 33729080 33729540 0 2 384,76, 0,384, +,+, 377082 LTR ERVL 842 chr3 33798806 33802601 CR1-Y3 465 - 33798806 33802601 0 2 111,70, 0,3725, -,-, 377115 LINE CR1 843 chr3 33873915 33875497 CR1-X1 248 - 33873915 33875497 0 2 737,304, 0,1278, -,-, 377167 LINE CR1 844 chr3 34074568 34074640 (TA)n 782 + 34074568 34074640 0 2 17,38, 0,34, +,+, 377273 Simple_repeat Simple_repeat 846 chr3 34305943 34306467 GGLTR5B 442 - 34305943 34306467 0 2 155,339, 0,185, -,-, 377383 LTR ERVL 847 chr3 34429013 34429591 CR1-D2 749 - 34429013 34429591 0 2 248,330, 0,248, -,-, 377441 LINE CR1 847 chr3 34464460 34465354 REP131 311 - 34464460 34465354 0 3 259,74,355, 0,374,539, -,-,-, 377456 DNA? DNA? 848 chr3 34472748 34473464 CR1-11_Crp 233 - 34472748 34473464 0 2 114,461, 0,255, -,-, 377460 LINE CR1 848 chr3 34579236 34580126 CR1-C2 344 - 34579236 34580126 0 2 624,256, 0,634, -,-, 377499 LINE CR1 849 chr3 34630627 34631710 CR1-X2 218 - 34630627 34631710 0 2 563,520, 0,563, -,-, 377526 LINE CR1 849 chr3 34644161 34645318 CR1-F2 579 + 34644161 34645318 0 2 173,880, 0,277, +,+, 377533 LINE CR1 850 chr3 34805770 34806876 CR1-Y2_Aves 173 - 34805770 34806876 0 2 182,101, 0,1005, -,-, 377602 LINE CR1 850 chr3 34821883 34822571 Charlie12_GG 611 - 34821883 34822571 0 2 404,268, 0,420, -,-, 377610 DNA hAT-Charlie 851 chr3 34969191 34970171 CR1-L3B_Croc 262 - 34969191 34970171 0 2 345,83, 0,897, -,-, 377664 LINE CR1 852 chr3 35012244 35012331 (GGCG)n 392 + 35012244 35012331 0 2 27,33, 0,54, +,+, 377699 Simple_repeat Simple_repeat 852 chr3 35068137 35068725 GGLTR5B 292 - 35068137 35068725 0 2 87,475, 0,113, -,-, 377737 LTR ERVL 853 chr3 35166393 35166582 Char12Mar1_GG 650 - 35166393 35166582 0 2 70,119, 0,70, -,-, 377798 DNA hAT-Charlie 853 chr3 35174002 35176485 CR1-C4 578 - 35174002 35176485 0 2 747,1455, 0,1028, -,-, 377806 LINE CR1 853 chr3 35192730 35193797 Mariner1_GG 541 - 35192730 35193797 0 2 731,309, 0,758, -,-, 377818 DNA TcMar-Mariner 853 chr3 35204475 35207614 GGERV20_I-int 975 + 35204475 35207614 0 5 220,345,102,2251,220, 0,221,566,668,2919, +,+,+,+,+, 377825 LTR ERVL 854 chr3 35263059 35263618 CR1-11_Crp 288 + 35263059 35263618 0 2 61,95, 0,464, +,+, 377844 LINE CR1 855 chr3 35447591 35448092 TguLTR5e 378 + 35447591 35448092 0 2 278,145, 0,356, +,+, 377926 LTR ERVL 856 chr3 35525128 35525269 A-rich 501 + 35525128 35525269 0 2 43,49, 0,92, +,+, 377963 Low_complexity Low_complexity 856 chr3 35544187 35544604 Char12Mar1_GG 680 - 35544187 35544604 0 2 71,346, 0,71, -,-, 377977 DNA hAT-Charlie 856 chr3 35599500 35600408 CR1-Y1_Aves 325 - 35599500 35600408 0 2 208,667, 0,241, -,-, 378017 LINE CR1 857 chr3 35671575 35672463 CR1-Y2_Aves 183 + 35671575 35672463 0 2 181,555, 0,333, +,+, 378051 LINE CR1 857 chr3 35690182 35690508 GGERV10_LTR 692 - 35690182 35690508 0 2 158,63, 0,263, -,-, 378056 LTR ERVL 858 chr3 35785687 35785937 CR1-F2 542 + 35785687 35785937 0 2 140,110, 0,140, +,+, 378100 LINE CR1 858 chr3 35861477 35861915 CR1-C4 557 + 35861477 35861915 0 2 189,249, 0,189, +,+, 378140 LINE CR1 859 chr3 35941618 35941699 GA-rich 218 + 35941618 35941699 0 2 36,20, 0,61, +,+, 378203 Low_complexity Low_complexity 859 chr3 35953850 35955036 CR1-X 498 + 35953850 35955036 0 2 140,1046, 0,140, +,+, 378210 LINE CR1 860 chr3 36081301 36081353 (TTTG)n 384 + 36081301 36081353 0 2 17,14, 0,38, +,+, 378271 Simple_repeat Simple_repeat 860 chr3 36082896 36083961 CR1-F0 287 - 36082896 36083961 0 2 646,419, 0,646, -,-, 378273 LINE CR1 860 chr3 36084436 36084776 CR1-Y 593 + 36084436 36084776 0 2 80,258, 0,82, +,+, 378274 LINE CR1 860 chr3 36095026 36095960 Mariner1_GG 665 - 36095026 36095960 0 2 88,838, 0,96, -,-, 378285 DNA TcMar-Mariner 860 chr3 36170908 36172836 CR1-F 548 + 36170908 36172836 0 2 1576,261, 0,1667, +,+, 378323 LINE CR1 861 chr3 36253117 36253291 CR1-L3B_Croc 495 + 36253117 36253291 0 2 98,76, 0,98, +,+, 378358 LINE CR1 861 chr3 36271318 36272157 CR1-C4 587 + 36271318 36272157 0 2 785,54, 0,785, +,+, 378373 LINE CR1 861 chr3 36273759 36274647 Mariner1_GG 640 - 36273759 36274647 0 2 417,471, 0,417, -,-, 378374 DNA TcMar-Mariner 861 chr3 36291648 36292061 CR1-C4 621 + 36291648 36292061 0 2 264,149, 0,264, +,+, 378390 LINE CR1 862 chr3 36370214 36370597 CR1-Y 723 + 36370214 36370597 0 2 328,55, 0,328, +,+, 378433 LINE CR1 862 chr3 36412824 36413663 CR1-C4 589 + 36412824 36413663 0 2 785,54, 0,785, +,+, 378466 LINE CR1 862 chr3 36415265 36416153 Mariner1_GG 633 - 36415265 36416153 0 2 417,471, 0,417, -,-, 378467 DNA TcMar-Mariner 863 chr3 36554870 36555664 Char12Mar1_GG 623 - 36554870 36555664 0 2 169,384, 0,410, -,-, 378546 DNA hAT-Charlie 864 chr3 36651108 36651187 (AT)n 1000 + 36651108 36651187 0 2 18,35, 0,44, +,+, 378608 Simple_repeat Simple_repeat 865 chr3 36711612 36712163 CR1-D 610 - 36711612 36712163 0 2 309,242, 0,309, -,-, 378656 LINE CR1 865 chr3 36737574 36737975 CR1-C3 570 + 36737574 36737975 0 2 112,211, 0,190, +,+, 378674 LINE CR1 865 chr3 36749350 36749465 (T)n 790 + 36749350 36749465 0 2 39,27, 0,88, +,+, 378683 Simple_repeat Simple_repeat 865 chr3 36785993 36786579 GGLTR8A 137 + 36785993 36786579 0 2 191,270, 0,316, +,+, 378708 LTR ERVL 865 chr3 36789110 36790021 GGLTR4B 563 - 36789110 36790021 0 2 144,195, 0,716, -,-, 378710 LTR ERVL 865 chr3 36795498 36798123 Mariner1b_GG 599 - 36795498 36798123 0 2 127,93, 0,2532, -,-, 378716 DNA TcMar-Mariner 866 chr3 36840401 36840580 GGLTR5B 378 - 36840401 36840580 0 2 83,96, 0,83, -,-, 378759 LTR ERVL 866 chr3 36897322 36897771 GGLTR6 630 - 36897322 36897771 0 2 110,285, 0,164, -,-, 378786 LTR ERVL 867 chr3 36972411 36973201 CR1-F2 437 + 36972411 36973201 0 2 232,555, 0,235, +,+, 378832 LINE CR1 867 chr3 36991289 36991885 GGLTR8B 546 + 36991289 36991885 0 2 395,178, 0,418, +,+, 378845 LTR ERVL 867 chr3 36998089 36999407 CR1-C3 642 + 36998089 36999407 0 2 481,210, 0,1108, +,+, 378858 LINE CR1 867 chr3 37046742 37047145 Charlie12_GG 647 - 37046742 37047145 0 2 73,318, 0,85, -,-, 378886 DNA hAT-Charlie 867 chr3 37047243 37048371 Charlie12_GG 449 - 37047243 37048371 0 2 170,248, 0,880, -,-, 378887 DNA hAT-Charlie 867 chr3 37078141 37078213 A-rich 384 + 37078141 37078213 0 2 20,31, 0,41, +,+, 378902 Low_complexity Low_complexity 868 chr3 37219021 37219126 (A)n 1000 + 37219021 37219126 0 2 46,19, 0,86, +,+, 378990 Simple_repeat Simple_repeat 869 chr3 37236497 37236727 CR1-D2 641 - 37236497 37236727 0 2 70,160, 0,70, -,-, 379006 LINE CR1 870 chr3 37359539 37359886 GGLTR3A 562 - 37359539 37359886 0 2 204,143, 0,204, -,-, 379087 LTR ERVL 870 chr3 37395839 37396133 CR1-Y1_Aves 395 + 37395839 37396133 0 2 64,185, 0,109, +,+, 379108 LINE CR1 870 chr3 37441133 37443064 CR1-Y2_Aves 195 + 37441133 37443064 0 2 778,1134, 0,797, +,+, 379144 LINE CR1 870 chr3 37462011 37463168 GGLTR8B 170 - 37462011 37463168 0 2 444,303, 0,854, -,-, 379162 LTR ERVL 13 chr3 37747597 37748830 CR1-Y1_Aves 387 - 37747597 37748830 0 2 201,815, 0,418, -,-, 379324 LINE CR1 873 chr3 37793722 37794158 CR1-E 750 + 37793722 37794158 0 2 331,90, 0,346, +,+, 379340 LINE CR1 873 chr3 37835704 37836374 CR1-Y2_Aves 178 - 37835704 37836374 0 2 135,372, 0,298, -,-, 379367 LINE CR1 876 chr3 38232383 38233134 CR1-Y2_Aves 260 - 38232383 38233134 0 2 264,401, 0,350, -,-, 379528 LINE CR1 876 chr3 38262262 38262671 CR1-3_Croc 251 + 38262262 38262671 0 3 12,23,98, 0,98,311, +,+,+, 379544 LINE CR1 877 chr3 38370087 38371089 CR1-X2 601 - 38370087 38371089 0 3 197,97,559, 0,197,443, -,-,-, 379586 LINE CR1 878 chr3 38522555 38522863 UCON1 324 + 38522555 38522863 0 2 71,146, 0,162, +,+, 379673 Unknown Unknown 879 chr3 38570606 38570873 CR1-X 399 + 38570606 38570873 0 2 166,101, 0,166, +,+, 379691 LINE CR1 879 chr3 38654522 38655478 Char12Mar1_GG 671 - 38654522 38655478 0 2 671,278, 0,678, -,-, 379729 DNA hAT-Charlie 880 chr3 38677971 38678226 CR1-F2 738 - 38677971 38678226 0 2 173,82, 0,173, -,-, 379736 LINE CR1 881 chr3 38823287 38823642 CR1-Y1_Aves 486 - 38823287 38823642 0 2 60,295, 0,60, -,-, 379799 LINE CR1 881 chr3 38923057 38923804 Mariner1_GG 498 - 38923057 38923804 0 2 611,136, 0,611, -,-, 379843 DNA TcMar-Mariner 882 chr3 38932556 38932924 CR1-Y2_Aves 497 + 38932556 38932924 0 2 144,224, 0,144, +,+, 379847 LINE CR1 882 chr3 38971848 38975010 CR1-C4 524 + 38971848 38975010 0 2 416,152, 0,3010, +,+, 379859 LINE CR1 883 chr3 39067686 39069671 CR1-Y2_Aves 378 - 39067686 39069671 0 4 543,185,710,160, 0,556,1095,1825, -,-,-,-, 379907 LINE CR1 883 chr3 39121727 39122601 CR1-L3A_Croc 35 + 39121727 39122601 0 2 402,196, 0,678, +,+, 379925 LINE CR1 883 chr3 39148249 39148966 CR1-Y1_Aves 209 - 39148249 39148966 0 2 480,219, 0,498, -,-, 379937 LINE CR1 883 chr3 39153342 39159168 GGERV10_LTR 976 + 39153342 39159168 0 3 220,5385,220, 0,221,5606, +,+,+, 379941 LTR ERVL 884 chr3 39300173 39300682 CR1-X2 482 - 39300173 39300682 0 2 205,287, 0,222, -,-, 380007 LINE CR1 885 chr3 39345170 39345682 CR1-Y4 532 - 39345170 39345682 0 2 58,208, 0,304, -,-, 380032 LINE CR1 885 chr3 39366767 39368736 CR1-Y2_Aves 195 - 39366767 39368736 0 2 163,364, 0,1605, -,-, 380043 LINE CR1 886 chr3 39495763 39495850 A-rich 374 + 39495763 39495850 0 2 27,37, 0,50, +,+, 380101 Low_complexity Low_complexity 887 chr3 39658895 39659041 Char12Mar1_GG 674 - 39658895 39659041 0 2 60,84, 0,62, -,-, 380163 DNA hAT-Charlie 887 chr3 39669546 39670069 GGLTR8A 597 + 39669546 39670069 0 2 54,469, 0,54, +,+, 380168 LTR ERVL 887 chr3 39687765 39690154 CR1-B2 554 - 39687765 39690154 0 2 126,345, 0,2044, -,-, 380180 LINE CR1 888 chr3 39720383 39721568 CR1-C2 328 + 39720383 39721568 0 2 210,253, 0,932, +,+, 380196 LINE CR1 888 chr3 39836737 39837559 CR1-11_Crp 36 + 39836737 39837559 0 2 395,322, 0,500, +,+, 380245 LINE CR1 889 chr3 39886767 39887750 CR1-C4 564 - 39886767 39887750 0 2 111,870, 0,113, -,-, 380269 LINE CR1 889 chr3 39931236 39932786 CR1-E 754 - 39931236 39932786 0 2 1194,356, 0,1194, -,-, 380299 LINE CR1 890 chr3 39984426 39985152 REP131 371 - 39984426 39985152 0 2 175,48, 0,678, -,-, 380322 DNA? DNA? 890 chr3 40026842 40027272 CR1-L3B_Croc 277 + 40026842 40027272 0 2 311,104, 0,326, +,+, 380346 LINE CR1 890 chr3 40066234 40067678 CR1-L3B_Croc 163 - 40066234 40067678 0 2 186,456, 0,988, -,-, 380363 LINE CR1 891 chr3 40151845 40152681 GGERV20_I-int 350 + 40151845 40152681 0 2 518,314, 0,522, +,+, 380404 LTR ERVL 892 chr3 40299953 40301495 CR1-L3A_Croc 277 + 40299953 40301495 0 3 54,326,271, 0,425,1271, +,+,+, 380474 LINE CR1 892 chr3 40306570 40307324 L2-3_Crp 291 - 40306570 40307324 0 2 65,564, 0,190, -,-, 380477 LINE L2 892 chr3 40315857 40316746 CR1-D 560 - 40315857 40316746 0 2 583,297, 0,592, -,-, 380481 LINE CR1 892 chr3 40322322 40323411 CR1-Y3 612 + 40322322 40323411 0 2 367,377, 0,712, +,+, 380484 LINE CR1 892 chr3 40358391 40358707 GGLTR5B 620 - 40358391 40358707 0 2 56,256, 0,60, -,-, 380503 LTR ERVL 893 chr3 40482306 40482598 CR1-D2 637 + 40482306 40482598 0 2 250,42, 0,250, +,+, 380560 LINE CR1 895 chr3 40682278 40683929 CR1-F2 309 - 40682278 40683929 0 2 687,114, 0,1537, -,-, 380656 LINE CR1 895 chr3 40683242 40683815 GGLTR5B 620 - 40683242 40683815 0 2 157,364, 0,209, -,-, 380658 LTR ERVL 896 chr3 40854013 40854436 CR1-Y4 367 - 40854013 40854436 0 3 100,37,212, 0,174,211, -,-,-, 380751 LINE CR1 899 chr3 41159822 41160987 CR1-Y2_Aves 339 + 41159822 41160987 0 2 648,442, 0,723, +,+, 380906 LINE CR1 900 chr3 41293160 41293911 TguLTR5e 166 - 41293160 41293911 0 2 24,238, 0,513, -,-, 380989 LTR ERVL 900 chr3 41396397 41396838 CR1-F2 618 + 41396397 41396838 0 2 240,201, 0,240, +,+, 381050 LINE CR1 901 chr3 41450760 41451244 GGLTR5A 487 + 41450760 41451244 0 2 226,224, 0,260, +,+, 381075 LTR ERVL 901 chr3 41464018 41464246 Char12Mar1_GG 645 - 41464018 41464246 0 2 175,53, 0,175, -,-, 381092 DNA hAT-Charlie 902 chr3 41594646 41594715 (T)n 841 + 41594646 41594715 0 2 26,32, 0,37, +,+, 381175 Simple_repeat Simple_repeat 902 chr3 41623998 41624442 CR1-X1 549 - 41623998 41624442 0 2 351,93, 0,351, -,-, 381188 LINE CR1 903 chr3 41701650 41703732 CR1-L3A_Croc 194 + 41701650 41703732 0 2 195,415, 0,1667, +,+, 381236 LINE CR1 903 chr3 41736830 41738098 CR1-F2 410 + 41736830 41738098 0 2 854,414, 0,854, +,+, 381260 LINE CR1 903 chr3 41739411 41739774 GGERV22_LTR 519 - 41739411 41739774 0 2 146,188, 0,175, -,-, 381261 LTR ERVL 903 chr3 41778906 41780133 CR1-Y2_Aves 316 + 41778906 41780133 0 2 984,198, 0,1029, +,+, 381280 LINE CR1 904 chr3 41902734 41903501 CR1-D 473 - 41902734 41903501 0 2 204,563, 0,204, -,-, 381349 LINE CR1 904 chr3 41914218 41914788 CR1-D 451 - 41914218 41914788 0 2 204,366, 0,204, -,-, 381360 LINE CR1 904 chr3 41916581 41917355 CR1-D 463 - 41916581 41917355 0 2 206,568, 0,206, -,-, 381364 LINE CR1 904 chr3 41925718 41926606 CR1-F0 820 + 41925718 41926606 0 2 748,67, 0,821, +,+, 381372 LINE CR1 904 chr3 41927687 41928452 CR1-D 463 - 41927687 41928452 0 2 203,562, 0,203, -,-, 381375 LINE CR1 905 chr3 41951421 41958204 CR1-D2 476 + 41951421 41958204 0 2 392,65, 0,6718, +,+, 381396 LINE CR1 905 chr3 41960295 41961747 CR1-F2 652 - 41960295 41961747 0 2 1113,307, 0,1145, -,-, 381398 LINE CR1 905 chr3 41975463 41976857 Char12Mar1_GG 568 - 41975463 41976857 0 2 1285,83, 0,1311, -,-, 381405 DNA hAT-Charlie 905 chr3 41984966 41985573 CR1-D 627 - 41984966 41985573 0 2 124,350, 0,257, -,-, 381412 LINE CR1 907 chr3 42229529 42229943 CR1-X 384 - 42229529 42229943 0 2 158,123, 0,291, -,-, 381506 LINE CR1 907 chr3 42280577 42282756 CR1-Y2_Aves 307 + 42280577 42282756 0 3 302,224,120, 0,481,2059, +,+,+, 381532 LINE CR1 908 chr3 42340512 42340617 (A)n 851 + 42340512 42340617 0 2 21,30, 0,75, +,+, 381574 Simple_repeat Simple_repeat 908 chr3 42355882 42356189 CR1-Y1_Aves 545 - 42355882 42356189 0 2 234,70, 0,237, -,-, 381591 LINE CR1 908 chr3 42431913 42432515 CR1-L3B_Croc 272 - 42431913 42432515 0 2 95,444, 0,158, -,-, 381633 LINE CR1 908 chr3 42439934 42441240 CR1-L3A_Croc 227 + 42439934 42441240 0 3 642,99,162, 0,642,1144, +,+,+, 381636 LINE CR1 908 chr3 42450219 42450613 CR1-11_Crp 164 - 42450219 42450613 0 2 285,81, 0,313, -,-, 381641 LINE CR1 909 chr3 42532829 42533803 CR1-H 763 - 42532829 42533803 0 2 82,43, 0,931, -,-, 381684 LINE CR1 910 chr3 42618985 42620124 CR1-Y2_Aves 118 - 42618985 42620124 0 3 174,569,173, 0,395,966, -,-,-, 381721 LINE CR1 911 chr3 42826958 42828046 CR1-Y4 573 + 42826958 42828046 0 2 598,489, 0,599, +,+, 381812 LINE CR1 913 chr3 43016383 43017479 CR1-C4 512 + 43016383 43017479 0 2 226,215, 0,881, +,+, 381909 LINE CR1 913 chr3 43036163 43036223 (AT)n 678 + 43036163 43036223 0 2 21,6, 0,54, +,+, 381922 Simple_repeat Simple_repeat 913 chr3 43066709 43066771 (TTGTT)n 408 + 43066709 43066771 0 2 28,9, 0,53, +,+, 381942 Simple_repeat Simple_repeat 914 chr3 43172567 43172941 GGLTR4A 624 + 43172567 43172941 0 2 241,116, 0,258, +,+, 382005 LTR ERVL 914 chr3 43224081 43224723 CR1-H2 502 - 43224081 43224723 0 2 183,459, 0,183, -,-, 382029 LINE CR1 915 chr3 43362179 43362283 Char12Mar1_GG 529 . 43362179 43362283 0 2 64,40, 0,64, +,-, 382108 DNA hAT-Charlie 916 chr3 43391239 43391576 GGERV10_LTR 421 - 43391239 43391576 0 2 158,58, 0,279, -,-, 382122 LTR ERVL 916 chr3 43488640 43489663 CR1-F 264 - 43488640 43489663 0 2 759,262, 0,761, -,-, 382186 LINE CR1 916 chr3 43494346 43496646 GGERV20_I-int 493 - 43494346 43496646 0 2 308,1984, 0,316, -,-, 382187 LTR ERVL 917 chr3 43554552 43555907 Mariner1_GG 535 - 43554552 43555907 0 2 984,292, 0,1063, -,-, 382223 DNA TcMar-Mariner 917 chr3 43610283 43617106 CR1-G 858 - 43610283 43617106 0 2 178,306, 0,6517, -,-, 382268 LINE CR1 917 chr3 43610462 43616800 GGLTR3F1 943 - 43610462 43616800 0 3 494,5349,494, 0,494,5844, -,-,-, 382269 LTR ERVL 917 chr3 43620455 43622945 CR1-D 590 - 43620455 43622945 0 2 169,2321, 0,169, -,-, 382273 LINE CR1 917 chr3 43633927 43637059 CR1-L3B_Croc 251 - 43633927 43637059 0 4 210,113,158,740, 0,239,847,2392, -,-,-,-, 382279 LINE CR1 918 chr3 43696013 43697548 CR1-C4 559 - 43696013 43697548 0 2 663,872, 0,663, -,-, 382324 LINE CR1 920 chr3 43984100 43985405 CR1-G 795 + 43984100 43985405 0 2 1133,171, 0,1134, +,+, 382493 LINE CR1 920 chr3 43985624 43986175 Mariner1_GG 664 - 43985624 43986175 0 3 441,62,45, 0,441,506, -,-,-, 382495 DNA TcMar-Mariner 924 chr3 44556745 44557341 GGLTR5B 542 - 44556745 44557341 0 2 275,276, 0,320, -,-, 382819 LTR ERVL 925 chr3 44569903 44570160 CR1-D2 574 + 44569903 44570160 0 2 11,177, 0,80, +,+, 382826 LINE CR1 925 chr3 44592455 44593147 Char12Mar1_GG 659 - 44592455 44593147 0 2 369,182, 0,510, -,-, 382850 DNA hAT-Charlie 925 chr3 44637725 44638165 CR1-X2 665 + 44637725 44638165 0 2 91,331, 0,109, +,+, 382876 LINE CR1 925 chr3 44639086 44641373 CR1-X2 204 - 44639086 44641373 0 2 222,702, 0,1585, -,-, 382878 LINE CR1 925 chr3 44648303 44648357 (AACA)n 356 + 44648303 44648357 0 2 7,8, 0,46, +,+, 382889 Simple_repeat Simple_repeat 925 chr3 44651061 44651980 CR1-Y2_Aves 203 - 44651061 44651980 0 3 280,297,154, 0,371,765, -,-,-, 382893 LINE CR1 925 chr3 44656134 44657094 CR1-Y4 375 + 44656134 44657094 0 2 275,672, 0,288, +,+, 382898 LINE CR1 926 chr3 44784384 44784845 CR1-Y 555 + 44784384 44784845 0 2 140,239, 0,222, +,+, 382979 LINE CR1 926 chr3 44792046 44792332 CR1-C4 653 - 44792046 44792332 0 2 105,180, 0,106, -,-, 382986 LINE CR1 926 chr3 44815692 44815787 (T)n 958 + 44815692 44815787 0 2 20,25, 0,70, +,+, 383000 Simple_repeat Simple_repeat 927 chr3 44835796 44836726 Mariner1_GG 506 - 44835796 44836726 0 2 286,402, 0,528, -,-, 383016 DNA TcMar-Mariner 927 chr3 44892577 44893277 GGLTR8B 428 + 44892577 44893277 0 2 456,156, 0,544, +,+, 383059 LTR ERVL 927 chr3 44909293 44910245 CR1-G 360 + 44909293 44910245 0 2 186,327, 0,625, +,+, 383067 LINE CR1 927 chr3 44946501 44946602 (T)n 579 + 44946501 44946602 0 2 34,43, 0,58, +,+, 383093 Simple_repeat Simple_repeat 928 chr3 45013087 45013343 CR1-C2 525 - 45013087 45013343 0 2 198,58, 0,198, -,-, 383131 LINE CR1 928 chr3 45013876 45013967 (A)n 785 + 45013876 45013967 0 2 22,37, 0,54, +,+, 383133 Simple_repeat Simple_repeat 928 chr3 45056687 45057502 Char12Mar1_GG 554 - 45056687 45057502 0 2 179,282, 0,533, -,-, 383151 DNA hAT-Charlie 930 chr3 45229472 45230323 L2-1_AMi 136 - 45229472 45230323 0 2 275,113, 0,738, -,-, 383263 LINE L2 930 chr3 45232068 45232136 (TTTCT)n 288 + 45232068 45232136 0 2 9,25, 0,43, +,+, 383265 Simple_repeat Simple_repeat 930 chr3 45243391 45244622 CR1-L3B_Croc 58 + 45243391 45244622 0 2 306,351, 0,880, +,+, 383274 LINE CR1 930 chr3 45293352 45293725 GGLTR11-int 426 + 45293352 45293725 0 2 185,125, 0,248, +,+, 383304 LTR ERV1 932 chr3 45508225 45508476 CR1-Y4 507 + 45508225 45508476 0 2 115,117, 0,134, +,+, 383402 LINE CR1 932 chr3 45589742 45589973 CR1-C 519 - 45589742 45589973 0 2 130,64, 0,167, -,-, 383439 LINE CR1 116 chr3 45743515 45744724 CR1-X 625 + 45743515 45744724 0 2 583,141, 0,1068, +,+, 383500 LINE CR1 934 chr3 45803206 45804085 CR1-X1 560 - 45803206 45804085 0 2 295,584, 0,295, -,-, 383524 LINE CR1 934 chr3 45847712 45847872 CR1-Y2_Aves 560 + 45847712 45847872 0 2 89,63, 0,97, +,+, 383546 LINE CR1 935 chr3 45922166 45925309 CR1-Y2_Aves 242 - 45922166 45925309 0 2 294,373, 0,2770, -,-, 383577 LINE CR1 936 chr3 46037208 46040440 CR1-D 309 - 46037208 46040440 0 4 12,42,750,727, 0,95,1146,2505, -,-,-,-, 383636 LINE CR1 936 chr3 46037220 46037859 CR1-F2 330 - 46037220 46037859 0 2 83,423, 0,216, -,-, 383637 LINE CR1 936 chr3 46107817 46108192 GGLTR8B 262 - 46107817 46108192 0 2 119,214, 0,161, -,-, 383672 LTR ERVL 936 chr3 46117976 46118899 CR1-C3 602 - 46117976 46118899 0 2 69,853, 0,70, -,-, 383678 LINE CR1 936 chr3 46126301 46127144 CR1-C3 646 - 46126301 46127144 0 2 492,344, 0,499, -,-, 383680 LINE CR1 937 chr3 46256016 46257007 CR1-F2 467 + 46256016 46257007 0 2 952,39, 0,952, +,+, 383749 LINE CR1 938 chr3 46348310 46348983 GGLTR5B 555 - 46348310 46348983 0 3 158,92,59, 0,473,614, -,-,-, 383793 LTR ERVL 940 chr3 46536366 46537113 CR1-F2 615 + 46536366 46537113 0 2 530,217, 0,530, +,+, 383909 LINE CR1 940 chr3 46541137 46542167 GGERVL18-int 617 + 46541137 46542167 0 2 685,345, 0,685, +,+, 383911 LTR ERVL 940 chr3 46543536 46545852 GGERVL18-int 451 - 46543536 46545852 0 3 330,842,1144, 0,330,1172, -,-,-, 383913 LTR ERVL 940 chr3 46603729 46604108 GGLTR4A 640 - 46603729 46604108 0 2 117,209, 0,170, -,-, 383954 LTR ERVL 942 chr3 46801898 46803189 CR1-L3B_Croc 171 + 46801898 46803189 0 4 336,225,134,203, 0,354,813,1088, +,+,+,+, 384059 LINE CR1 942 chr3 46806870 46807435 TguLTR5e 325 - 46806870 46807435 0 2 211,295, 0,270, -,-, 384062 LTR ERVL 942 chr3 46898809 46899707 CR1-E 717 - 46898809 46899707 0 2 138,400, 0,498, -,-, 384110 LINE CR1 943 chr3 47004471 47004714 CR1-D2 692 - 47004471 47004714 0 2 130,112, 0,131, -,-, 384156 LINE CR1 945 chr3 47312083 47312138 GA-rich 354 + 47312083 47312138 0 2 15,21, 0,34, +,+, 384308 Low_complexity Low_complexity 946 chr3 47321712 47321775 (TTCTTT)n 416 + 47321712 47321775 0 2 10,23, 0,40, +,+, 384315 Simple_repeat Simple_repeat 946 chr3 47384295 47385434 Char12Mar1_GG 618 - 47384295 47385434 0 2 377,739, 0,400, -,-, 384337 DNA hAT-Charlie 947 chr3 47551067 47551123 (T)n 660 + 47551067 47551123 0 2 10,7, 0,49, +,+, 384423 Simple_repeat Simple_repeat 948 chr3 47648142 47648963 GGLTR5B 298 - 47648142 47648963 0 2 318,225, 0,596, -,-, 384472 LTR ERVL 948 chr3 47675651 47675862 CR1-13_AMi 465 - 47675651 47675862 0 2 121,74, 0,137, -,-, 384486 LINE CR1 948 chr3 47689774 47692507 CR1-Y2_Aves 171 - 47689774 47692507 0 3 481,486,118, 0,2117,2615, -,-,-, 384488 LINE CR1 948 chr3 47705240 47705991 CR1-D2 627 + 47705240 47705991 0 2 250,500, 0,251, +,+, 384496 LINE CR1 950 chr3 47940070 47940931 CR1-X1 594 + 47940070 47940931 0 2 51,802, 0,59, +,+, 384603 LINE CR1 950 chr3 47948240 47948718 CR1-D2 557 - 47948240 47948718 0 3 94,63,318, 0,97,160, -,-,-, 384612 LINE CR1 950 chr3 47954284 47954349 (TTTG)n 394 + 47954284 47954349 0 2 12,13, 0,52, +,+, 384615 Simple_repeat Simple_repeat 950 chr3 47960537 47961678 CR1-Y2_Aves 207 + 47960537 47961678 0 2 898,140, 0,1001, +,+, 384619 LINE CR1 951 chr3 48016458 48016950 CR1-E 321 + 48016458 48016950 0 2 128,364, 0,128, +,+, 384652 LINE CR1 951 chr3 48041493 48042365 CR1-L3A_Croc 395 - 48041493 48042365 0 2 161,79, 0,793, -,-, 384666 LINE CR1 952 chr3 48122051 48123354 CR1-L3B_Croc 244 + 48122051 48123354 0 2 173,445, 0,858, +,+, 384705 LINE CR1 953 chr3 48322008 48322961 CR1-Y2_Aves 370 - 48322008 48322961 0 3 475,348,116, 0,475,837, -,-,-, 384805 LINE CR1 954 chr3 48454331 48454719 CR1-C4 512 + 48454331 48454719 0 2 47,134, 0,254, +,+, 384866 LINE CR1 954 chr3 48471264 48471813 CR1-C4 670 + 48471264 48471813 0 2 251,273, 0,276, +,+, 384878 LINE CR1 956 chr3 48688661 48689771 CR1-B 878 - 48688661 48689771 0 2 401,670, 0,440, -,-, 384969 LINE CR1 956 chr3 48741938 48742502 CR1-C4 553 - 48741938 48742502 0 2 215,349, 0,215, -,-, 385011 LINE CR1 956 chr3 48744952 48745709 CR1-Y1_Aves 484 - 48744952 48745709 0 2 407,345, 0,412, -,-, 385013 LINE CR1 956 chr3 48748898 48749218 CR1-F2 594 + 48748898 48749218 0 2 145,175, 0,145, +,+, 385015 LINE CR1 958 chr3 49009322 49010235 CR1-C 818 - 49009322 49010235 0 2 72,290, 0,623, -,-, 385143 LINE CR1 959 chr3 49146173 49146904 CR1-L3A_Croc 183 - 49146173 49146904 0 2 448,213, 0,518, -,-, 385228 LINE CR1 961 chr3 49286431 49291390 CR1-Y2_Aves 211 + 49286431 49291390 0 3 557,236,903, 0,725,4056, +,+,+, 385330 LINE CR1 961 chr3 49311397 49311732 CR1-D2 665 - 49311397 49311732 0 2 202,82, 0,253, -,-, 385351 LINE CR1 961 chr3 49379660 49380593 CR1-Y1_Aves 71 + 49379660 49380593 0 2 484,418, 0,515, +,+, 385395 LINE CR1 961 chr3 49404251 49404386 TguLTR5e 687 + 49404251 49404386 0 2 115,20, 0,115, +,+, 385411 LTR ERVL 962 chr3 49514136 49514257 A-rich 542 + 49514136 49514257 0 2 36,18, 0,103, +,+, 385488 Low_complexity Low_complexity 963 chr3 49547944 49548588 CR1-C4 475 + 49547944 49548588 0 2 365,271, 0,373, +,+, 385510 LINE CR1 964 chr3 49720620 49721361 GGLTR12C 438 + 49720620 49721361 0 2 121,241, 0,500, +,+, 385623 LTR ERVL 964 chr3 49751881 49752924 CR1-Y1_Aves 511 - 49751881 49752924 0 2 233,310, 0,733, -,-, 385642 LINE CR1 965 chr3 49915391 49915598 CR1-C2 578 + 49915391 49915598 0 2 64,140, 0,67, +,+, 385750 LINE CR1 967 chr3 50071228 50071927 CR1-Y2_Aves 218 - 50071228 50071927 0 2 367,332, 0,367, -,-, 385869 LINE CR1 967 chr3 50091392 50091863 GGLTR5A 350 - 50091392 50091863 0 2 221,194, 0,277, -,-, 385881 LTR ERVL 968 chr3 50210614 50211070 CR1-Y4 647 - 50210614 50211070 0 2 390,66, 0,390, -,-, 385950 LINE CR1 970 chr3 50488581 50489354 CR1-Y2_Aves 196 + 50488581 50489354 0 2 316,253, 0,520, +,+, 386089 LINE CR1 970 chr3 50497671 50498665 CR1-C4 503 - 50497671 50498665 0 2 878,116, 0,878, -,-, 386095 LINE CR1 970 chr3 50529046 50530224 CR1-C4 535 + 50529046 50530224 0 2 175,1003, 0,175, +,+, 386116 LINE CR1 970 chr3 50570106 50570274 (T)n 576 + 50570106 50570274 0 2 57,50, 0,118, +,+, 386140 Simple_repeat Simple_repeat 971 chr3 50648105 50649256 CR1-E 488 + 50648105 50649256 0 2 1026,114, 0,1037, +,+, 386187 LINE CR1 972 chr3 50783640 50784756 CR1-Y2_Aves 270 + 50783640 50784756 0 2 674,429, 0,687, +,+, 386248 LINE CR1 972 chr3 50829672 50830335 CR1-Y1_Aves 490 + 50829672 50830335 0 2 109,554, 0,109, +,+, 386280 LINE CR1 973 chr3 50966408 50967187 CR1-Y2_Aves 135 + 50966408 50967187 0 2 379,364, 0,415, +,+, 386357 LINE CR1 974 chr3 51018894 51019417 TguLTR5e 396 + 51018894 51019417 0 2 327,94, 0,429, +,+, 386388 LTR ERVL 974 chr3 51091094 51092189 CR1-C4 433 + 51091094 51092189 0 2 262,833, 0,262, +,+, 386424 LINE CR1 975 chr3 51144765 51145348 CR1-F2 580 + 51144765 51145348 0 2 468,115, 0,468, +,+, 386453 LINE CR1 975 chr3 51177283 51178027 UCON27 309 + 51177283 51178027 0 2 113,460, 0,284, +,+, 386473 Unknown Unknown 975 chr3 51213400 51213791 CR1-C4 608 + 51213400 51213791 0 3 60,177,154, 0,60,237, +,+,+, 386500 LINE CR1 975 chr3 51217186 51217642 CR1-Y2_Aves 387 - 51217186 51217642 0 2 183,271, 0,185, -,-, 386503 LINE CR1 976 chr3 51308851 51308911 (T)n 1000 + 51308851 51308911 0 2 19,27, 0,33, +,+, 386563 Simple_repeat Simple_repeat 976 chr3 51348909 51350807 CR1-L3A_Croc 278 + 51348909 51350807 0 3 279,364,165, 0,306,1733, +,+,+, 386582 LINE CR1 977 chr3 51388462 51389081 CR1-C4 685 - 51388462 51389081 0 2 231,63, 0,556, -,-, 386602 LINE CR1 977 chr3 51433528 51434160 GGLTR8A 576 + 51433528 51434160 0 2 410,222, 0,410, +,+, 386617 LTR ERVL 978 chr3 51544732 51545488 Mariner1_GG 483 - 51544732 51545488 0 2 612,144, 0,612, -,-, 386671 DNA TcMar-Mariner 978 chr3 51592936 51593075 MER133B 246 . 51592936 51593075 0 2 116,23, 0,116, -,+, 386700 DNA? DNA? 979 chr3 51748069 51748736 CR1-E 768 + 51748069 51748736 0 2 342,324, 0,343, +,+, 386776 LINE CR1 980 chr3 51774647 51775787 CR1-F2 434 - 51774647 51775787 0 2 680,439, 0,701, -,-, 386785 LINE CR1 980 chr3 51902211 51903838 CR1-Y3 610 + 51902211 51903838 0 2 416,1203, 0,424, +,+, 386834 LINE CR1 981 chr3 51962077 51963058 CR1-L3A_Croc 182 + 51962077 51963058 0 2 451,297, 0,684, +,+, 386867 LINE CR1 982 chr3 52114357 52115994 CR1-C4 595 - 52114357 52115994 0 2 790,383, 0,1254, -,-, 386940 LINE CR1 983 chr3 52186823 52187224 GGLTR8B 189 + 52186823 52187224 0 2 268,73, 0,328, +,+, 386964 LTR ERVL 983 chr3 52265611 52265679 (ACATAA)n 504 + 52265611 52265679 0 2 23,9, 0,59, +,+, 386991 Simple_repeat Simple_repeat 985 chr3 52473207 52474284 CR1-F2 429 + 52473207 52474284 0 2 656,404, 0,673, +,+, 387087 LINE CR1 985 chr3 52496157 52496519 CR1-11_Crp 354 - 52496157 52496519 0 2 222,68, 0,294, -,-, 387101 LINE CR1 987 chr3 52693009 52694322 GGLTR8B 417 + 52693009 52694322 0 2 458,171, 0,1142, +,+, 387200 LTR ERVL 987 chr3 52739487 52740067 CR1-C4 571 + 52739487 52740067 0 2 355,225, 0,355, +,+, 387220 LINE CR1 989 chr3 52992461 52993079 CR1-F2 315 - 52992461 52993079 0 2 207,411, 0,207, -,-, 387345 LINE CR1 990 chr3 53102998 53104338 GGLTR5B 262 - 53102998 53104338 0 2 190,372, 0,968, -,-, 387422 LTR ERVL 990 chr3 53209744 53209810 (TTGTTT)n 484 + 53209744 53209810 0 2 7,14, 0,52, +,+, 387504 Simple_repeat Simple_repeat 991 chr3 53238343 53238870 GGLTR5B 467 + 53238343 53238870 0 2 59,169, 0,358, +,+, 387520 LTR ERVL 991 chr3 53263891 53264477 CR1-F2 528 - 53263891 53264477 0 2 243,137, 0,449, -,-, 387540 LINE CR1 991 chr3 53264143 53264340 CR1-Y 764 + 53264143 53264340 0 2 125,72, 0,125, +,+, 387541 LINE CR1 991 chr3 53267976 53269207 CR1-F2 558 - 53267976 53269207 0 3 549,447,230, 0,549,1001, -,-,-, 387543 LINE CR1 991 chr3 53269524 53270549 ENS1B-LTR 376 + 53269524 53270549 0 2 705,159, 0,866, +,+, 387545 LTR ERVL 991 chr3 53277882 53277991 CR1-D2 569 + 53277882 53277991 0 2 51,58, 0,51, +,+, 387552 LINE CR1 992 chr3 53475893 53476966 CR1-F2 316 + 53475893 53476966 0 2 135,921, 0,152, +,+, 387696 LINE CR1 993 chr3 53480018 53480123 A-rich 530 + 53480018 53480123 0 2 43,49, 0,56, +,+, 387699 Low_complexity Low_complexity 993 chr3 53486630 53487280 GGERVL-C-int 623 + 53486630 53487280 0 2 133,517, 0,133, +,+, 387705 LTR ERVL 993 chr3 53498300 53499669 CR1-D 649 + 53498300 53499669 0 2 424,945, 0,424, +,+, 387715 LINE CR1 993 chr3 53510339 53511014 GGLTR3F2 702 - 53510339 53511014 0 2 249,276, 0,399, -,-, 387724 LTR ERVL 993 chr3 53513989 53514222 GGERV21_LTR 614 - 53513989 53514222 0 2 179,37, 0,196, -,-, 387726 LTR ERVL 993 chr3 53514520 53515109 CR1-D 712 - 53514520 53515109 0 2 441,136, 0,453, -,-, 387727 LINE CR1 993 chr3 53522189 53522763 CR1-C4 562 + 53522189 53522763 0 2 70,504, 0,70, +,+, 387735 LINE CR1 993 chr3 53579042 53579568 CR1-Y2_Aves 234 - 53579042 53579568 0 2 170,340, 0,186, -,-, 387784 LINE CR1 994 chr3 53650541 53651849 Mariner1_GG 693 - 53650541 53651849 0 3 86,60,177, 0,106,1131, -,-,-, 387840 DNA TcMar-Mariner 994 chr3 53661787 53665700 CR1-F2 534 - 53661787 53665700 0 5 466,577,150,934,697, 0,466,1549,1699,3216, -,-,-,-,-, 387849 LINE CR1 994 chr3 53683572 53685327 Char12Mar1_GG 718 - 53683572 53685327 0 2 449,95, 0,1660, -,-, 387865 DNA hAT-Charlie 995 chr3 53775954 53778233 CR1-C 835 + 53775954 53778233 0 3 516,1225,532, 0,522,1747, +,+,+, 387963 LINE CR1 995 chr3 53815595 53815662 (ACAGAA)n 326 + 53815595 53815662 0 2 33,8, 0,59, +,+, 387995 Simple_repeat Simple_repeat 995 chr3 53859770 53860422 GGLTR5A 235 - 53859770 53860422 0 2 134,403, 0,249, -,-, 388022 LTR ERVL 996 chr3 53872018 53872725 GGLTR5A 409 - 53872018 53872725 0 2 500,125, 0,582, -,-, 388031 LTR ERVL 996 chr3 53979079 53979540 CR1-Y2_Aves 359 - 53979079 53979540 0 2 334,63, 0,398, -,-, 388101 LINE CR1 997 chr3 54015219 54015764 CR1-F2 580 - 54015219 54015764 0 2 239,292, 0,253, -,-, 388129 LINE CR1 998 chr3 54159904 54160952 Char12Mar1_GG 587 - 54159904 54160952 0 2 907,113, 0,935, -,-, 388228 DNA hAT-Charlie 998 chr3 54168141 54168443 GGLTR5A 476 + 54168141 54168443 0 2 185,117, 0,185, +,+, 388230 LTR ERVL 998 chr3 54249081 54249669 CR1-X2 578 - 54249081 54249669 0 2 253,335, 0,253, -,-, 388273 LINE CR1 124 chr3 54263664 54264686 Mariner1_GG 682 - 54263664 54264686 0 2 472,549, 0,473, -,-, 388278 DNA TcMar-Mariner 999 chr3 54302495 54303288 CR1-11_Crp 239 - 54302495 54303288 0 2 176,102, 0,691, -,-, 388303 LINE CR1 999 chr3 54392873 54393563 CR1-Y4 621 - 54392873 54393563 0 2 191,499, 0,191, -,-, 388346 LINE CR1 1002 chr3 54705309 54705794 CR1-X2 622 + 54705309 54705794 0 2 228,250, 0,235, +,+, 388505 LINE CR1 1002 chr3 54728938 54729338 GGLTR8A 215 - 54728938 54729338 0 2 156,225, 0,175, -,-, 388514 LTR ERVL 1003 chr3 54913880 54914337 CR1-E 456 - 54913880 54914337 0 2 293,156, 0,301, -,-, 388639 LINE CR1 1005 chr3 55112048 55112341 CR1-Y2_Aves 215 - 55112048 55112341 0 2 171,90, 0,203, -,-, 388735 LINE CR1 1005 chr3 55139393 55142778 GGLTR10B 945 - 55139393 55142778 0 3 382,2616,382, 0,385,3003, -,-,-, 388748 LTR ERVK 1006 chr3 55264025 55266102 CR1-F 462 - 55264025 55266102 0 2 1865,204, 0,1873, -,-, 388813 LINE CR1 1007 chr3 55337578 55337703 GA-rich 465 + 55337578 55337703 0 2 76,32, 0,93, +,+, 388853 Low_complexity Low_complexity 1007 chr3 55428615 55430445 CR1-E 753 - 55428615 55430445 0 2 122,1388, 0,442, -,-, 388898 LINE CR1 1007 chr3 55430415 55431047 CR1-E 686 - 55430415 55431047 0 2 260,372, 0,260, -,-, 388900 LINE CR1 1007 chr3 55441045 55441928 CR1-Y1_Aves 604 - 55441045 55441928 0 2 465,41, 0,842, -,-, 388907 LINE CR1 1008 chr3 55464260 55464673 CR1-F 959 - 55464260 55464673 0 2 123,287, 0,126, -,-, 388923 LINE CR1 1008 chr3 55557792 55558153 Char12Mar1_GG 684 - 55557792 55558153 0 2 174,187, 0,174, -,-, 388962 DNA hAT-Charlie 1010 chr3 55736078 55736739 CR1-Y2_Aves 248 - 55736078 55736739 0 2 204,353, 0,308, -,-, 389070 LINE CR1 1010 chr3 55766844 55767891 GGLTR8A 372 - 55766844 55767891 0 2 588,268, 0,779, -,-, 389087 LTR ERVL 1010 chr3 55772304 55772855 CR1-C4 567 - 55772304 55772855 0 2 428,123, 0,428, -,-, 389091 LINE CR1 1010 chr3 55787458 55788429 Mariner1_GG 401 - 55787458 55788429 0 2 705,253, 0,718, -,-, 389098 DNA TcMar-Mariner 1010 chr3 55788554 55794169 CR1-F2 439 - 55788554 55794169 0 2 158,93, 0,5522, -,-, 389101 LINE CR1 1010 chr3 55788715 55788857 CR1-F2 667 + 55788715 55788857 0 2 67,75, 0,67, +,+, 389102 LINE CR1 1011 chr3 55863143 55863435 REP131 452 - 55863143 55863435 0 2 67,61, 0,231, -,-, 389142 DNA? DNA? 1011 chr3 55964085 55964968 Char12Mar1_GG 606 - 55964085 55964968 0 2 346,246, 0,637, -,-, 389198 DNA hAT-Charlie 1012 chr3 55987182 55988135 Mariner1_GG 640 - 55987182 55988135 0 2 218,735, 0,218, -,-, 389213 DNA TcMar-Mariner 1012 chr3 56040133 56040785 CR1-11_Crp 185 - 56040133 56040785 0 2 171,338, 0,314, -,-, 389235 LINE CR1 1012 chr3 56089012 56089420 CR1-L3B_Croc 446 + 56089012 56089420 0 2 75,85, 0,323, +,+, 389256 LINE CR1 1013 chr3 56103853 56104828 CR1-Y2_Aves 253 - 56103853 56104828 0 2 245,632, 0,343, -,-, 389264 LINE CR1 1014 chr3 56269073 56269426 CR1-D 619 + 56269073 56269426 0 3 76,128,127, 0,98,226, +,+,+, 389339 LINE CR1 1016 chr3 56519273 56519514 REP131 96 + 56519273 56519514 0 2 66,136, 0,105, +,+, 389503 DNA? DNA? 1016 chr3 56558218 56559008 GGLTR5A 595 + 56558218 56559008 0 2 500,76, 0,714, +,+, 389534 LTR ERVL 1016 chr3 56601239 56602725 Mariner1_GG 569 - 56601239 56602725 0 3 471,165,416, 0,901,1070, -,-,-, 389558 DNA TcMar-Mariner 1016 chr3 56621824 56622339 CR1-C4 464 - 56621824 56622339 0 2 355,160, 0,355, -,-, 389569 LINE CR1 1017 chr3 56683493 56684496 CR1-C2 761 - 56683493 56684496 0 2 227,69, 0,934, -,-, 389606 LINE CR1 1017 chr3 56734490 56738704 GGLTR10A 979 - 56734490 56738704 0 3 313,3584,313, 0,315,3901, -,-,-, 389638 LTR ERVK 1017 chr3 56745835 56749661 EAVHP_I-int 952 - 56745835 56749661 0 2 3511,313, 0,3513, -,-, 389643 LTR ERVK 1018 chr3 56756819 56757224 GGLTR5B 256 - 56756819 56757224 0 2 177,162, 0,243, -,-, 389649 LTR ERVL 1018 chr3 56759762 56760510 CR1-C4 639 + 56759762 56760510 0 2 276,472, 0,276, +,+, 389651 LINE CR1 1019 chr3 56910143 56910613 CR1-Y2_Aves 339 + 56910143 56910613 0 2 95,205, 0,265, +,+, 389733 LINE CR1 1019 chr3 56948081 56948134 (ATAAAA)n 766 + 56948081 56948134 0 2 8,18, 0,35, +,+, 389760 Simple_repeat Simple_repeat 1019 chr3 56987229 56987290 (TTTCTT)n 416 + 56987229 56987290 0 2 10,31, 0,30, +,+, 389777 Simple_repeat Simple_repeat 1020 chr3 57026504 57027237 CR1-Y1_Aves 415 + 57026504 57027237 0 3 213,130,248, 0,355,485, +,+,+, 389799 LINE CR1 1020 chr3 57099008 57099309 CR1-L3B_Croc 376 - 57099008 57099309 0 2 89,138, 0,163, -,-, 389839 LINE CR1 1021 chr3 57174061 57175066 CR1-C3 693 - 57174061 57175066 0 2 638,362, 0,643, -,-, 389879 LINE CR1 1021 chr3 57190937 57192653 CR1-C 852 - 57190937 57192653 0 2 273,1443, 0,273, -,-, 389888 LINE CR1 1021 chr3 57236705 57238151 CR1-E 750 + 57236705 57238151 0 2 124,1322, 0,124, +,+, 389912 LINE CR1 1022 chr3 57304925 57305035 (TTTCCC)n 528 + 57304925 57305035 0 2 56,8, 0,102, +,+, 389961 Simple_repeat Simple_repeat 1023 chr3 57411732 57412896 CR1-X2 567 - 57411732 57412896 0 2 251,913, 0,251, -,-, 390022 LINE CR1 1023 chr3 57458831 57460307 Mariner1_GG 677 - 57458831 57460307 0 2 1020,256, 0,1220, -,-, 390055 DNA TcMar-Mariner 1023 chr3 57470405 57471818 GGLTR8B 514 - 57470405 57471818 0 2 758,269, 0,1144, -,-, 390065 LTR ERVL 1023 chr3 57522563 57528217 CR1-Y1_Aves 363 - 57522563 57528217 0 3 106,217,134, 0,5275,5520, -,-,-, 390095 LINE CR1 1023 chr3 57527364 57527732 CR1-Y1_Aves 452 - 57527364 57527732 0 2 117,242, 0,126, -,-, 390098 LINE CR1 1024 chr3 57544731 57545593 CR1-L3A_Croc 291 + 57544731 57545593 0 2 126,164, 0,698, +,+, 390113 LINE CR1 1024 chr3 57610575 57611485 CR1-F2 589 - 57610575 57611485 0 2 590,320, 0,590, -,-, 390143 LINE CR1 1024 chr3 57655646 57657047 CR1-F2 577 - 57655646 57657047 0 2 326,620, 0,781, -,-, 390164 LINE CR1 1025 chr3 57713149 57714995 Charlie12_GG 465 - 57713149 57714995 0 3 217,1110,165, 0,558,1681, -,-,-, 390195 DNA hAT-Charlie 1025 chr3 57733341 57734143 CR1-Y2_Aves 234 + 57733341 57734143 0 2 123,621, 0,181, +,+, 390207 LINE CR1 1025 chr3 57777808 57777853 (TTATAT)n 478 + 57777808 57777853 0 2 6,8, 0,37, +,+, 390224 Simple_repeat Simple_repeat 1025 chr3 57798735 57801512 CR1-L3B_Croc 373 - 57798735 57801512 0 2 74,215, 0,2562, -,-, 390232 LINE CR1 1026 chr3 57802978 57803688 GGLTR5B 328 + 57802978 57803688 0 2 71,510, 0,200, +,+, 390235 LTR ERVL 1026 chr3 57844407 57844453 GA-rich 412 + 57844407 57844453 0 2 11,16, 0,30, +,+, 390255 Low_complexity Low_complexity 1027 chr3 57939599 57940152 CR1-8_Crp 288 + 57939599 57940152 0 2 80,314, 0,239, +,+, 390306 LINE CR1 1027 chr3 57992589 57992678 (A)n 894 + 57992589 57992678 0 2 42,17, 0,72, +,+, 390331 Simple_repeat Simple_repeat 1028 chr3 58125824 58127389 REP131 207 - 58125824 58127389 0 2 169,185, 0,1380, -,-, 390402 DNA? DNA? 1028 chr3 58130910 58132147 CR1-D2 227 + 58130910 58132147 0 3 475,328,165, 0,481,1072, +,+,+, 390406 LINE CR1 1029 chr3 58270205 58270276 (T)n 724 + 58270205 58270276 0 2 24,25, 0,46, +,+, 390511 Simple_repeat Simple_repeat 1030 chr3 58362142 58365206 CR1-Y3 725 - 58362142 58365206 0 2 345,406, 0,2658, -,-, 390564 LINE CR1 1030 chr3 58369085 58370564 CR1-X 560 - 58369085 58370564 0 2 795,684, 0,795, -,-, 390569 LINE CR1 1030 chr3 58377023 58377100 (ATGCAT)n 172 + 58377023 58377100 0 2 15,29, 0,48, +,+, 390575 Simple_repeat Simple_repeat 1030 chr3 58407125 58407586 CR1-Y2_Aves 198 - 58407125 58407586 0 2 231,117, 0,344, -,-, 390593 LINE CR1 1030 chr3 58435036 58435339 GGERV22_LTR 472 + 58435036 58435339 0 2 245,33, 0,270, +,+, 390613 LTR ERVL 1031 chr3 58463567 58463953 GGLTR8B 258 - 58463567 58463953 0 2 105,164, 0,222, -,-, 390635 LTR ERVL 1031 chr3 58506926 58507070 A-rich 453 + 58506926 58507070 0 2 43,52, 0,92, +,+, 390665 Low_complexity Low_complexity 1031 chr3 58517169 58521946 Char12Mar1_GG 521 - 58517169 58521946 0 3 309,126,836, 0,309,3941, -,-,-, 390675 DNA hAT-Charlie 1031 chr3 58534727 58536645 CR1-F2 518 + 58534727 58536645 0 2 1685,231, 0,1687, +,+, 390685 LINE CR1 1032 chr3 58596131 58608032 Char12Mar1_GG 496 - 58596131 58608032 0 2 424,347, 0,11554, -,-, 390709 DNA hAT-Charlie 1032 chr3 58600416 58600820 GGLTR4A 646 - 58600416 58600820 0 2 180,183, 0,221, -,-, 390716 LTR ERVL 1032 chr3 58622075 58622838 CR1-C2 248 - 58622075 58622838 0 2 15,85, 0,678, -,-, 390730 LINE CR1 1032 chr3 58645997 58648915 CR1-11_Crp 202 + 58645997 58648915 0 2 365,131, 0,2787, +,+, 390752 LINE CR1 1032 chr3 58646571 58648746 CR1-Y4 501 + 58646571 58648746 0 3 283,547,431, 0,513,1744, +,+,+, 390753 LINE CR1 1032 chr3 58653320 58653961 CR1-X2 525 + 58653320 58653961 0 2 554,85, 0,556, +,+, 390760 LINE CR1 1032 chr3 58672516 58674646 CR1-L3B_Croc 197 + 58672516 58674646 0 3 227,597,342, 0,227,1788, +,+,+, 390772 LINE CR1 1032 chr3 58690853 58692868 CR1-Y3 648 - 58690853 58692868 0 2 781,825, 0,1190, -,-, 390780 LINE CR1 1032 chr3 58697808 58697862 (ATAAT)n 504 + 58697808 58697862 0 2 13,7, 0,47, +,+, 390786 Simple_repeat Simple_repeat 1033 chr3 58809456 58809992 CR1-Y1_Aves 385 + 58809456 58809992 0 3 110,282,132, 0,122,404, +,+,+, 390858 LINE CR1 1034 chr3 58863631 58864154 GGLTR5A 452 - 58863631 58864154 0 2 366,133, 0,390, -,-, 390897 LTR ERVL 1034 chr3 58964083 58965783 CR1-F2 552 - 58964083 58965783 0 2 218,338, 0,1362, -,-, 390968 LINE CR1 1035 chr3 59007429 59007527 (T)n 1000 + 59007429 59007527 0 2 22,26, 0,72, +,+, 390993 Simple_repeat Simple_repeat 1035 chr3 59014305 59014904 GGLTR8A 514 + 59014305 59014904 0 2 452,143, 0,456, +,+, 391001 LTR ERVL 1035 chr3 59027427 59028675 Char12Mar1_GG 474 - 59027427 59028675 0 2 949,299, 0,949, -,-, 391009 DNA hAT-Charlie 1036 chr3 59116396 59117004 GGLTR5B 448 + 59116396 59117004 0 2 398,182, 0,426, +,+, 391065 LTR ERVL 1036 chr3 59169090 59169317 Char12Mar1_GG 556 + 59169090 59169317 0 2 118,78, 0,149, +,+, 391094 DNA hAT-Charlie 1036 chr3 59172983 59173039 (TTG)n 460 + 59172983 59173039 0 2 7,8, 0,48, +,+, 391099 Simple_repeat Simple_repeat 1036 chr3 59179174 59179689 TguLTR5e 245 + 59179174 59179689 0 2 286,198, 0,317, +,+, 391108 LTR ERVL 1037 chr3 59347059 59347640 CR1-C4 615 - 59347059 59347640 0 2 233,72, 0,509, -,-, 391213 LINE CR1 1037 chr3 59348996 59349725 CR1-L3B_Croc 230 - 59348996 59349725 0 2 98,354, 0,375, -,-, 391215 LINE CR1 1038 chr3 59432826 59434304 CR1-C4 640 - 59432826 59434304 0 2 424,1033, 0,445, -,-, 391250 LINE CR1 1039 chr3 59577359 59577917 CR1-L3B_Croc 255 - 59577359 59577917 0 2 121,176, 0,382, -,-, 391335 LINE CR1 1039 chr3 59622860 59624972 Charlie12_GG 548 - 59622860 59624972 0 3 477,749,252, 0,519,1860, -,-,-, 391373 DNA hAT-Charlie 1040 chr3 59699760 59700050 CR1-D 770 + 59699760 59700050 0 2 185,47, 0,243, +,+, 391419 LINE CR1 1040 chr3 59747154 59747704 REP131 255 - 59747154 59747704 0 2 142,206, 0,344, -,-, 391449 DNA? DNA? 1041 chr3 59883353 59884598 CR1-L3A_Croc 288 + 59883353 59884598 0 2 173,113, 0,1132, +,+, 391516 LINE CR1 1042 chr3 59929976 59930437 TguLTR5e 415 + 59929976 59930437 0 2 96,182, 0,279, +,+, 391542 LTR ERVL 1042 chr3 59968665 59969741 CR1-F0 486 - 59968665 59969741 0 2 282,791, 0,285, -,-, 391561 LINE CR1 1043 chr3 60072136 60073257 CR1-C4 655 + 60072136 60073257 0 3 170,199,752, 0,170,369, +,+,+, 391631 LINE CR1 1043 chr3 60078725 60079879 CR1-11_Crp 179 + 60078725 60079879 0 2 400,121, 0,1033, +,+, 391634 LINE CR1 1044 chr3 60192243 60195317 CR1-C4 647 - 60192243 60195317 0 2 1055,259, 0,2815, -,-, 391694 LINE CR1 1044 chr3 60213798 60214059 Eulor6D 277 - 60213798 60214059 0 2 89,112, 0,149, -,-, 391711 DNA? DNA? 1044 chr3 60255216 60256221 REP131 113 - 60255216 60256221 0 2 266,209, 0,796, -,-, 391734 DNA? DNA? 1045 chr3 60330482 60330734 CR1-11_Crp 402 - 60330482 60330734 0 2 86,106, 0,146, -,-, 391778 LINE CR1 1045 chr3 60347772 60347974 UCON4 473 - 60347772 60347974 0 2 78,82, 0,120, -,-, 391782 Unknown Unknown 1045 chr3 60402637 60402705 (TTCCTT)n 540 + 60402637 60402705 0 2 6,29, 0,39, +,+, 391817 Simple_repeat Simple_repeat 1047 chr3 60558296 60558908 CR1-Y1_Aves 415 + 60558296 60558908 0 2 86,526, 0,86, +,+, 391872 LINE CR1 1047 chr3 60663224 60664884 CR1-Y4 462 - 60663224 60664884 0 2 525,607, 0,1053, -,-, 391958 LINE CR1 1048 chr3 60744216 60745100 REP131 173 - 60744216 60745100 0 3 300,216,192, 0,417,692, -,-,-, 392010 DNA? DNA? 1048 chr3 60774700 60777233 CR1-C4 453 - 60774700 60777233 0 2 2207,326, 0,2207, -,-, 392036 LINE CR1 1049 chr3 60905727 60906397 CR1-L3A_Croc 150 + 60905727 60906397 0 2 153,246, 0,424, +,+, 392111 LINE CR1 1049 chr3 60918051 60918569 CR1-Y4 571 + 60918051 60918569 0 2 298,220, 0,298, +,+, 392118 LINE CR1 1049 chr3 60943170 60945023 CR1-L3A_Croc 307 - 60943170 60945023 0 2 769,616, 0,1237, -,-, 392133 LINE CR1 1050 chr3 60971236 60972370 CR1-D2 391 - 60971236 60972370 0 2 273,821, 0,313, -,-, 392162 LINE CR1 1050 chr3 61054620 61054704 (TA)n 398 + 61054620 61054704 0 2 35,15, 0,69, +,+, 392224 Simple_repeat Simple_repeat 1050 chr3 61056106 61056353 CR1-E 563 - 61056106 61056353 0 2 130,100, 0,147, -,-, 392226 LINE CR1 1051 chr3 61194656 61194966 CR1-Y1_Aves 485 + 61194656 61194966 0 2 156,154, 0,156, +,+, 392316 LINE CR1 1052 chr3 61247524 61248913 CR1-Y4 542 + 61247524 61248913 0 2 112,874, 0,515, +,+, 392349 LINE CR1 1052 chr3 61247636 61248037 GGLTR4A 592 + 61247636 61248037 0 2 224,110, 0,291, +,+, 392350 LTR ERVL 1052 chr3 61325846 61326752 CR1-Y2_Aves 415 + 61325846 61326752 0 2 443,259, 0,647, +,+, 392405 LINE CR1 1053 chr3 61470216 61470828 GGLTR8B 462 + 61470216 61470828 0 2 192,272, 0,340, +,+, 392491 LTR ERVL 1054 chr3 61481023 61481800 GGLTR8B 560 - 61481023 61481800 0 2 574,203, 0,574, -,-, 392496 LTR ERVL 1054 chr3 61489217 61491655 CR1-Y4 386 + 61489217 61491655 0 2 1221,1211, 0,1227, +,+, 392497 LINE CR1 1054 chr3 61492500 61493205 CR1-D2 205 + 61492500 61493205 0 2 270,237, 0,468, +,+, 392498 LINE CR1 1054 chr3 61493936 61495741 CR1-C4 603 + 61493936 61495741 0 4 789,896,77,36, 0,795,1691,1769, +,+,+,+, 392499 LINE CR1 1054 chr3 61515984 61517100 CR1-Y1_Aves 436 - 61515984 61517100 0 2 336,162, 0,954, -,-, 392512 LINE CR1 1054 chr3 61596240 61596746 Mariner1_GG 560 - 61596240 61596746 0 2 446,60, 0,446, -,-, 392566 DNA TcMar-Mariner 131 chr3 61603569 61604237 CR1-Y1_Aves 330 - 61603569 61604237 0 2 576,92, 0,576, -,-, 392574 LINE CR1 1055 chr3 61622920 61622960 (TTTTGT)n 524 + 61622920 61622960 0 2 6,8, 0,32, +,+, 392589 Simple_repeat Simple_repeat 1055 chr3 61634534 61635322 Mariner1_GG 543 - 61634534 61635322 0 2 507,281, 0,507, -,-, 392602 DNA TcMar-Mariner 1055 chr3 61650418 61650903 Char12Mar1_GG 657 - 61650418 61650903 0 2 51,432, 0,53, -,-, 392613 DNA hAT-Charlie 1055 chr3 61669692 61670056 CR1-D2 718 - 61669692 61670056 0 2 318,46, 0,318, -,-, 392630 LINE CR1 1055 chr3 61728976 61729126 CR1-11_Crp 384 - 61728976 61729126 0 2 18,106, 0,44, -,-, 392668 LINE CR1 1056 chr3 61739118 61739515 TguLTR5e 309 + 61739118 61739515 0 2 164,148, 0,249, +,+, 392675 LTR ERVL 1056 chr3 61774073 61775019 Charlie12_GG 634 + 61774073 61775019 0 2 302,612, 0,334, +,+, 392704 DNA hAT-Charlie 1056 chr3 61787079 61788785 CR1-H 793 + 61787079 61788785 0 2 832,871, 0,835, +,+, 392718 LINE CR1 1057 chr3 61890834 61891373 CR1-C4 628 - 61890834 61891373 0 2 219,319, 0,220, -,-, 392783 LINE CR1 1057 chr3 61906340 61907411 CR1-Y1_Aves 486 + 61906340 61907411 0 2 850,221, 0,850, +,+, 392792 LINE CR1 1058 chr3 62036814 62037158 GGLTR5B 679 - 62036814 62037158 0 2 130,212, 0,132, -,-, 392883 LTR ERVL 1058 chr3 62043969 62044452 CR1-X2 585 - 62043969 62044452 0 2 445,38, 0,445, -,-, 392887 LINE CR1 1058 chr3 62079449 62079503 A-rich 360 + 62079449 62079503 0 2 12,12, 0,42, +,+, 392914 Low_complexity Low_complexity 1059 chr3 62138243 62141197 CR1-H 816 - 62138243 62141197 0 2 2179,775, 0,2179, -,-, 392959 LINE CR1 1059 chr3 62153710 62157424 CR1-G 749 - 62153710 62157424 0 2 1633,2081, 0,1633, -,-, 392963 LINE CR1 1059 chr3 62158047 62158428 GGLTR4A 695 - 62158047 62158428 0 2 77,262, 0,119, -,-, 392964 LTR ERVL 1059 chr3 62248724 62249591 CR1-L3B_Croc 198 - 62248724 62249591 0 2 345,146, 0,721, -,-, 393040 LINE CR1 1060 chr3 62345180 62345802 Char12Mar1_GG 546 + 62345180 62345802 0 2 283,309, 0,313, +,+, 393096 DNA hAT-Charlie 1060 chr3 62365291 62367057 GGERVL18-int 671 - 62365291 62367057 0 2 317,1303, 0,463, -,-, 393110 LTR ERVL 1060 chr3 62368344 62370264 GGERVL18-int 262 + 62368344 62370264 0 3 379,570,597, 0,753,1323, +,+,+, 393114 LTR ERVL 1060 chr3 62377395 62378000 CR1-Y2_Aves 115 + 62377395 62378000 0 2 155,274, 0,331, +,+, 393123 LINE CR1 1060 chr3 62381904 62382465 CR1-D2 542 + 62381904 62382465 0 2 125,436, 0,125, +,+, 393125 LINE CR1 1061 chr3 62447228 62447987 CR1-D2 560 + 62447228 62447987 0 2 374,281, 0,478, +,+, 393186 LINE CR1 1061 chr3 62466990 62467841 Mariner1_GG 445 - 62466990 62467841 0 2 95,719, 0,132, -,-, 393199 DNA TcMar-Mariner 1061 chr3 62467854 62468067 CR1-Y1_Aves 357 + 62467854 62468067 0 2 80,129, 0,84, +,+, 393201 LINE CR1 1061 chr3 62490220 62491034 CR1-L3B_Croc 235 - 62490220 62491034 0 2 331,146, 0,668, -,-, 393216 LINE CR1 1061 chr3 62512469 62512604 A-rich 586 + 62512469 62512604 0 2 42,43, 0,92, +,+, 393237 Low_complexity Low_complexity 1062 chr3 62523548 62524037 CR1-Y2_Aves 294 + 62523548 62524037 0 2 400,74, 0,415, +,+, 393247 LINE CR1 1062 chr3 62560645 62561200 GGLTR5B 222 - 62560645 62561200 0 2 131,371, 0,184, -,-, 393269 LTR ERVL 1062 chr3 62595169 62599050 CR1-D2 572 + 62595169 62599050 0 2 245,303, 0,3578, +,+, 393292 LINE CR1 1062 chr3 62595429 62595867 GGLTR3C1 407 + 62595429 62595867 0 3 170,63,67, 0,183,371, +,+,+, 393293 LTR ERVL 1063 chr3 62714831 62716738 CR1-D 713 + 62714831 62716738 0 3 119,801,317, 0,461,1590, +,+,+, 393383 LINE CR1 1063 chr3 62756991 62758685 CR1-F2 438 + 62756991 62758685 0 3 244,112,1034, 0,274,660, +,+,+, 393404 LINE CR1 1064 chr3 62784448 62785496 CR1-L3B_Croc 220 - 62784448 62785496 0 2 101,370, 0,678, -,-, 393423 LINE CR1 1064 chr3 62795596 62795904 CR1-X1 604 - 62795596 62795904 0 2 147,161, 0,147, -,-, 393431 LINE CR1 1064 chr3 62827999 62828849 Mariner1_GG 639 - 62827999 62828849 0 2 80,768, 0,82, -,-, 393451 DNA TcMar-Mariner 1065 chr3 62924507 62925219 CR1-D2 349 + 62924507 62925219 0 3 204,35,302, 0,375,410, +,+,+, 393515 LINE CR1 1065 chr3 62964383 62964887 REP131 167 - 62964383 62964887 0 2 197,192, 0,312, -,-, 393531 DNA? DNA? 1066 chr3 63052700 63053150 GGLTR8A 351 - 63052700 63053150 0 2 107,99, 0,351, -,-, 393574 LTR ERVL 1066 chr3 63110902 63111099 CR1-X2 656 + 63110902 63111099 0 2 130,50, 0,147, +,+, 393607 LINE CR1 133 chr3 63168668 63176916 CR1-Y 365 - 63168668 63176916 0 3 500,230,228, 0,3267,8020, -,-,-, 393635 LINE CR1 1066 chr3 63172165 63174515 CR1-F2 439 - 63172165 63174515 0 2 1725,262, 0,2088, -,-, 393640 LINE CR1 1067 chr3 63176918 63179266 CR1-F2 534 - 63176918 63179266 0 2 1723,186, 0,2162, -,-, 393643 LINE CR1 1067 chr3 63203361 63204302 CR1-L3B_Croc 189 + 63203361 63204302 0 2 205,144, 0,797, +,+, 393657 LINE CR1 1068 chr3 63373730 63373938 CR1-E 553 + 63373730 63373938 0 2 147,49, 0,159, +,+, 393742 LINE CR1 1068 chr3 63396081 63396438 CR1-D2 636 + 63396081 63396438 0 2 102,255, 0,102, +,+, 393754 LINE CR1 1069 chr3 63494044 63495533 CR1-Y4 443 + 63494044 63495533 0 2 179,1310, 0,179, +,+, 393810 LINE CR1 1069 chr3 63534100 63534488 Char12Mar1_GG 552 - 63534100 63534488 0 2 121,267, 0,121, -,-, 393829 DNA hAT-Charlie 1070 chr3 63596062 63596647 CR1-C2 753 - 63596062 63596647 0 2 381,204, 0,381, -,-, 393862 LINE CR1 1070 chr3 63684853 63685550 CR1-Y2_Aves 189 - 63684853 63685550 0 2 231,341, 0,356, -,-, 393895 LINE CR1 1071 chr3 63753888 63754147 CR1-F2 709 + 63753888 63754147 0 2 126,133, 0,126, +,+, 393927 LINE CR1 1071 chr3 63761329 63766369 CR1-Y2_Aves 321 + 63761329 63766369 0 4 271,1254,198,224, 0,333,2355,4816, +,+,+,+, 393936 LINE CR1 1071 chr3 63768512 63771094 CR1-Y2_Aves 306 + 63768512 63771094 0 3 259,1247,229, 0,338,2353, +,+,+, 393941 LINE CR1 1071 chr3 63773254 63775832 CR1-Y2_Aves 380 + 63773254 63775832 0 3 186,1241,228, 0,341,2350, +,+,+, 393945 LINE CR1 1071 chr3 63790436 63791311 CR1-C4 522 - 63790436 63791311 0 2 509,362, 0,513, -,-, 393955 LINE CR1 1071 chr3 63793370 63797871 CR1-B2 616 - 63793370 63797871 0 2 161,125, 0,4376, -,-, 393956 LINE CR1 1072 chr3 63852082 63857051 CR1-X1 547 - 63852082 63857051 0 2 89,71, 0,4898, -,-, 393985 LINE CR1 1072 chr3 63877848 63878898 CR1-11_Crp 221 + 63877848 63878898 0 2 205,168, 0,882, +,+, 393994 LINE CR1 1072 chr3 63955649 63956108 GGLTR5A 495 - 63955649 63956108 0 2 211,248, 0,211, -,-, 394038 LTR ERVL 1073 chr3 64023845 64024328 CR1-Y4 646 + 64023845 64024328 0 2 210,273, 0,210, +,+, 394078 LINE CR1 1073 chr3 64037636 64037703 (TGTTT)n 742 + 64037636 64037703 0 2 7,6, 0,61, +,+, 394086 Simple_repeat Simple_repeat 1075 chr3 64283432 64284147 CR1-Y1_Aves 372 + 64283432 64284147 0 2 445,270, 0,445, +,+, 394234 LINE CR1 1075 chr3 64286777 64287030 GGLTR9 458 - 64286777 64287030 0 2 190,44, 0,209, -,-, 394237 LTR ERVL 1075 chr3 64311584 64313164 CR1-F2 595 - 64311584 64313164 0 2 756,174, 0,1406, -,-, 394256 LINE CR1 1076 chr3 64360675 64361716 Mariner1_GG 679 - 64360675 64361716 0 2 927,114, 0,927, -,-, 394304 DNA TcMar-Mariner 1076 chr3 64397462 64398896 CR1-C 804 + 64397462 64398896 0 2 183,1250, 0,184, +,+, 394333 LINE CR1 1076 chr3 64408950 64409969 CR1-F 397 - 64408950 64409969 0 2 237,213, 0,806, -,-, 394344 LINE CR1 1076 chr3 64412770 64413884 CR1-Y4 585 + 64412770 64413884 0 2 820,292, 0,822, +,+, 394347 LINE CR1 1076 chr3 64416123 64417264 Char12Mar1_GG 716 - 64416123 64417264 0 2 534,33, 0,1108, -,-, 394350 DNA hAT-Charlie 1076 chr3 64420085 64420190 A-rich 604 + 64420085 64420190 0 2 37,32, 0,73, +,+, 394353 Low_complexity Low_complexity 1076 chr3 64485179 64485889 GGLTR8B 385 + 64485179 64485889 0 2 421,174, 0,536, +,+, 394406 LTR ERVL 1077 chr3 64523798 64524178 CR1-Y2_Aves 324 - 64523798 64524178 0 2 145,233, 0,147, -,-, 394433 LINE CR1 1077 chr3 64563983 64565281 CR1-C3 645 - 64563983 64565281 0 2 600,192, 0,1106, -,-, 394471 LINE CR1 1077 chr3 64593588 64593678 GGLTR3A 843 + 64593588 64593678 0 2 64,26, 0,64, +,+, 394496 LTR ERVL 1077 chr3 64613074 64613997 CR1-D2 510 - 64613074 64613997 0 2 192,253, 0,670, -,-, 394510 LINE CR1 1078 chr3 64625110 64625417 CR1-L3A_Croc 206 + 64625110 64625417 0 2 135,172, 0,135, +,+, 394524 LINE CR1 1078 chr3 64634254 64634586 GGLTR5B 712 + 64634254 64634586 0 2 111,221, 0,111, +,+, 394535 LTR ERVL 1078 chr3 64671204 64675265 Char12Mar1_GG 711 - 64671204 64675265 0 2 143,235, 0,3826, -,-, 394570 DNA hAT-Charlie 1078 chr3 64702573 64704431 CR1-L3B_Croc 190 - 64702573 64704431 0 2 304,100, 0,1758, -,-, 394596 LINE CR1 1078 chr3 64711387 64711718 GGERV10_LTR 560 + 64711387 64711718 0 2 83,160, 0,171, +,+, 394601 LTR ERVL 1079 chr3 64763926 64769751 GGERV10_LTR 979 - 64763926 64769751 0 3 220,5384,220, 0,220,5605, -,-,-, 394650 LTR ERVL 1079 chr3 64829416 64830163 CR1-D2 440 - 64829416 64830163 0 2 638,109, 0,638, -,-, 394699 LINE CR1 1080 chr3 64915304 64916161 Char12Mar1_GG 437 - 64915304 64916161 0 2 201,149, 0,708, -,-, 394761 DNA hAT-Charlie 1080 chr3 64954244 64954813 Char12Mar1_GG 530 - 64954244 64954813 0 2 125,389, 0,180, -,-, 394792 DNA hAT-Charlie 1080 chr3 64998136 64998664 Char12Mar1_GG 568 - 64998136 64998664 0 2 131,381, 0,147, -,-, 394827 DNA hAT-Charlie 1081 chr3 65043292 65043864 CR1-C4 676 - 65043292 65043864 0 2 360,77, 0,495, -,-, 394850 LINE CR1 1081 chr3 65079235 65079596 REP131 262 - 65079235 65079596 0 2 165,134, 0,227, -,-, 394895 DNA? DNA? 1082 chr3 65184990 65185626 CR1-Y2_Aves 125 - 65184990 65185626 0 2 416,152, 0,484, -,-, 394962 LINE CR1 1082 chr3 65258331 65261076 CR1-D2 718 + 65258331 65261076 0 2 538,100, 0,2645, +,+, 395008 LINE CR1 1082 chr3 65272421 65273806 CR1-Y2_Aves 214 + 65272421 65273806 0 2 239,381, 0,1004, +,+, 395024 LINE CR1 1083 chr3 65274870 65275278 GGERVK10-int 947 - 65274870 65275278 0 2 363,45, 0,363, -,-, 395028 LTR ERVK 1083 chr3 65316790 65317537 CR1-F2 582 - 65316790 65317537 0 2 562,182, 0,565, -,-, 395060 LINE CR1 1083 chr3 65330988 65331845 GGLTR6 587 + 65330988 65331845 0 2 250,130, 0,727, +,+, 395075 LTR ERVL 1083 chr3 65402033 65402916 CR1-Y1_Aves 410 + 65402033 65402916 0 3 110,468,77, 0,110,806, +,+,+, 395137 LINE CR1 1084 chr3 65439462 65440147 L2-3_Crp 183 + 65439462 65440147 0 2 182,298, 0,387, +,+, 395167 LINE L2 1084 chr3 65482974 65483733 Char12Mar1_GG 634 - 65482974 65483733 0 2 70,449, 0,310, -,-, 395203 DNA hAT-Charlie 1085 chr3 65579766 65581005 Char12Mar1_GG 569 - 65579766 65581005 0 2 421,818, 0,421, -,-, 395283 DNA hAT-Charlie 1085 chr3 65609248 65610747 CR1-F2 661 - 65609248 65610747 0 2 1129,64, 0,1435, -,-, 395302 LINE CR1 1086 chr3 65672725 65673168 CR1-Y4 655 + 65672725 65673168 0 2 184,259, 0,184, +,+, 395343 LINE CR1 1086 chr3 65701040 65701587 GGLTR5B 245 + 65701040 65701587 0 3 337,51,94, 0,356,453, +,+,+, 395361 LTR ERVL 1087 chr3 65819249 65819847 CR1-X1 417 - 65819249 65819847 0 2 222,376, 0,222, -,-, 395437 LINE CR1 1088 chr3 66019131 66019185 (CCTTC)n 472 + 66019131 66019185 0 2 7,7, 0,47, +,+, 395542 Simple_repeat Simple_repeat 1089 chr3 66076510 66076548 (TTTTG)n 556 + 66076510 66076548 0 2 6,9, 0,29, +,+, 395575 Simple_repeat Simple_repeat 1089 chr3 66111597 66112401 CR1-Y2_Aves 241 - 66111597 66112401 0 2 208,564, 0,240, -,-, 395596 LINE CR1 1089 chr3 66118738 66120597 CR1-L3A_Croc 93 - 66118738 66120597 0 3 824,324,478, 0,972,1381, -,-,-, 395598 LINE CR1 1090 chr3 66231015 66231593 CR1-11_Crp 240 - 66231015 66231593 0 2 463,99, 0,479, -,-, 395648 LINE CR1 1090 chr3 66266644 66269228 CR1-C3 531 - 66266644 66269228 0 2 861,1723, 0,861, -,-, 395669 LINE CR1 1090 chr3 66314611 66315245 CR1-Y2_Aves 279 - 66314611 66315245 0 2 98,130, 0,504, -,-, 395695 LINE CR1 1091 chr3 66430571 66431974 CR1-D2 587 + 66430571 66431974 0 2 951,49, 0,1354, +,+, 395744 LINE CR1 1092 chr3 66454656 66455739 CR1-F2 710 + 66454656 66455739 0 2 352,731, 0,352, +,+, 395758 LINE CR1 1092 chr3 66484380 66485180 CR1-X2 532 + 66484380 66485180 0 2 438,362, 0,438, +,+, 395768 LINE CR1 1092 chr3 66492755 66493149 CR1-D2 375 + 66492755 66493149 0 2 152,242, 0,152, +,+, 395772 LINE CR1 1093 chr3 66634893 66635442 CR1-D2 703 + 66634893 66635442 0 2 83,466, 0,83, +,+, 395841 LINE CR1 1093 chr3 66678907 66679986 CR1-D2 707 + 66678907 66679986 0 2 182,171, 0,908, +,+, 395866 LINE CR1 1093 chr3 66683975 66684454 GGLTR8B 341 - 66683975 66684454 0 2 391,88, 0,391, -,-, 395875 LTR ERVL 1094 chr3 66773836 66774681 CR1-D 773 - 66773836 66774681 0 2 301,544, 0,301, -,-, 395925 LINE CR1 1095 chr3 66886558 66887647 CR1-F2 498 - 66886558 66887647 0 2 805,284, 0,805, -,-, 395992 LINE CR1 1095 chr3 66921271 66921802 CR1-D2 574 - 66921271 66921802 0 2 246,254, 0,277, -,-, 396005 LINE CR1 1096 chr3 66994920 66995319 CR1-X2 702 + 66994920 66995319 0 2 45,80, 0,319, +,+, 396058 LINE CR1 1096 chr3 67045697 67045951 CR1-Y1_Aves 605 + 67045697 67045951 0 2 143,97, 0,157, +,+, 396091 LINE CR1 1096 chr3 67052385 67052757 Mariner1b_GG 551 - 67052385 67052757 0 2 278,94, 0,278, -,-, 396093 DNA TcMar-Mariner 1096 chr3 67091430 67093605 CR1-X2 566 - 67091430 67093605 0 2 281,127, 0,2048, -,-, 396126 LINE CR1 1096 chr3 67091714 67093484 CR1-F2 647 + 67091714 67093484 0 2 848,922, 0,848, +,+, 396127 LINE CR1 1097 chr3 67118897 67119254 CR1-Y4 605 + 67118897 67119254 0 2 131,226, 0,131, +,+, 396137 LINE CR1 1097 chr3 67124772 67125978 CR1-L3B_Croc 177 - 67124772 67125978 0 3 154,309,389, 0,175,817, -,-,-, 396139 LINE CR1 1097 chr3 67181355 67181869 CR1-C4 689 - 67181355 67181869 0 2 257,257, 0,257, -,-, 396171 LINE CR1 1097 chr3 67209101 67210094 CR1-E 503 - 67209101 67210094 0 2 696,297, 0,696, -,-, 396186 LINE CR1 1098 chr3 67324907 67326079 CR1-F2 653 - 67324907 67326079 0 2 181,979, 0,193, -,-, 396236 LINE CR1 1099 chr3 67380598 67381444 CR1-11_Crp 172 + 67380598 67381444 0 2 537,222, 0,624, +,+, 396267 LINE CR1 1099 chr3 67403984 67404094 (T)n 667 + 67403984 67404094 0 2 30,37, 0,73, +,+, 396280 Simple_repeat Simple_repeat 1099 chr3 67405048 67405108 (TCC)n 278 + 67405048 67405108 0 2 8,26, 0,34, +,+, 396282 Simple_repeat Simple_repeat 1099 chr3 67415020 67415303 Char12Mar1_GG 674 - 67415020 67415303 0 2 196,87, 0,196, -,-, 396289 DNA hAT-Charlie 1099 chr3 67433259 67434167 CR1-8_Crp 268 - 67433259 67434167 0 2 668,75, 0,833, -,-, 396303 LINE CR1 1100 chr3 67608599 67609964 CR1-C4 552 - 67608599 67609964 0 2 490,866, 0,499, -,-, 396401 LINE CR1 1101 chr3 67633156 67634957 CR1-F2 534 + 67633156 67634957 0 3 594,981,226, 0,594,1575, +,+,+, 396414 LINE CR1 1101 chr3 67645576 67646115 CR1-F0 511 - 67645576 67646115 0 2 92,447, 0,92, -,-, 396418 LINE CR1 1102 chr3 67818408 67819106 CR1-Y1_Aves 352 + 67818408 67819106 0 2 275,423, 0,275, +,+, 396539 LINE CR1 1103 chr3 67956358 67956710 CR1-16_AMi 314 - 67956358 67956710 0 2 30,295, 0,57, -,-, 396616 LINE CR1 1103 chr3 67973903 67975509 CR1-C4 553 + 67973903 67975509 0 2 352,931, 0,675, +,+, 396624 LINE CR1 1103 chr3 68023152 68023776 CR1-C4 535 - 68023152 68023776 0 2 151,472, 0,152, -,-, 396656 LINE CR1 1104 chr3 68072543 68072812 CR1-C3 689 + 68072543 68072812 0 2 138,131, 0,138, +,+, 396696 LINE CR1 1104 chr3 68073928 68074536 CR1-L3A_Croc 477 - 68073928 68074536 0 2 104,53, 0,555, -,-, 396697 LINE CR1 1104 chr3 68092650 68093487 CR1-C4 379 - 68092650 68093487 0 2 222,146, 0,691, -,-, 396709 LINE CR1 1105 chr3 68198350 68198893 CR1-11_Crp 191 + 68198350 68198893 0 2 253,82, 0,461, +,+, 396777 LINE CR1 1105 chr3 68201856 68202552 CR1-D2 676 - 68201856 68202552 0 2 660,36, 0,660, -,-, 396780 LINE CR1 1105 chr3 68239897 68241251 CR1-D2 507 - 68239897 68241251 0 2 720,290, 0,1064, -,-, 396789 LINE CR1 1105 chr3 68251705 68252506 CR1-L3A_Croc 216 + 68251705 68252506 0 2 698,88, 0,713, +,+, 396797 LINE CR1 1106 chr3 68313674 68313796 GGLTR10C1 889 - 68313674 68313796 0 2 67,55, 0,67, -,-, 396826 LTR ERVK 1106 chr3 68397877 68399948 CR1-Y2_Aves 145 + 68397877 68399948 0 3 99,369,913, 0,330,1158, +,+,+, 396875 LINE CR1 1106 chr3 68409644 68411717 CR1-C4 533 + 68409644 68411717 0 2 123,248, 0,1825, +,+, 396883 LINE CR1 1107 chr3 68541366 68542546 REP131 112 - 68541366 68542546 0 2 351,740, 0,440, -,-, 396944 DNA? DNA? 1108 chr3 68655402 68656210 CR1-D 598 - 68655402 68656210 0 2 223,585, 0,223, -,-, 396998 LINE CR1 1109 chr3 68742204 68742410 CR1-Y1_Aves 359 - 68742204 68742410 0 2 60,100, 0,106, -,-, 397045 LINE CR1 1110 chr3 68888783 68892985 CR1-F2 290 + 68888783 68892985 0 2 139,406, 0,3796, +,+, 397112 LINE CR1 1111 chr3 68960389 68960743 CR1-Y4 533 + 68960389 68960743 0 2 263,91, 0,263, +,+, 397142 LINE CR1 1111 chr3 68984842 68984958 (T)n 798 + 68984842 68984958 0 2 34,19, 0,97, +,+, 397151 Simple_repeat Simple_repeat 1112 chr3 69202621 69203037 CR1-X1 559 + 69202621 69203037 0 2 79,337, 0,79, +,+, 397276 LINE CR1 1113 chr3 69258476 69259007 CR1-Y2_Aves 85 - 69258476 69259007 0 2 388,101, 0,430, -,-, 397317 LINE CR1 1113 chr3 69262809 69263380 GGLTR8A 268 - 69262809 69263380 0 2 220,345, 0,226, -,-, 397320 LTR ERVL 1113 chr3 69272147 69272673 GGLTR8A 529 - 69272147 69272673 0 2 168,310, 0,216, -,-, 397325 LTR ERVL 1114 chr3 69337390 69337906 GGLTR10C1 930 + 69337390 69337906 0 2 150,363, 0,153, +,+, 397367 LTR ERVK 1114 chr3 69440223 69440947 CR1-Y4 137 - 69440223 69440947 0 2 536,132, 0,592, -,-, 397446 LINE CR1 1114 chr3 69454088 69454623 GGERV28_LTR 654 + 69454088 69454623 0 2 290,209, 0,326, +,+, 397456 LTR ERVK 1115 chr3 69481379 69481877 CR1-L3B_Croc 268 + 69481379 69481877 0 2 224,250, 0,248, +,+, 397482 LINE CR1 1115 chr3 69492128 69492216 (TATATG)n 358 + 69492128 69492216 0 2 16,11, 0,77, +,+, 397488 Simple_repeat Simple_repeat 1115 chr3 69513189 69513648 Char12Mar1_GG 691 - 69513189 69513648 0 2 227,41, 0,418, -,-, 397512 DNA hAT-Charlie 1115 chr3 69540314 69540589 CR1-F2 488 - 69540314 69540589 0 2 214,60, 0,215, -,-, 397533 LINE CR1 1115 chr3 69560315 69561643 CR1-D2 530 + 69560315 69561643 0 3 101,102,483, 0,743,845, +,+,+, 397547 LINE CR1 1115 chr3 69563498 69563988 GGLTR8B 166 - 69563498 69563988 0 2 142,99, 0,391, -,-, 397550 LTR ERVL 1115 chr3 69577004 69577064 (TTTC)n 368 + 69577004 69577064 0 2 20,7, 0,53, +,+, 397562 Simple_repeat Simple_repeat 1115 chr3 69584889 69587418 CR1-D 648 + 69584889 69587418 0 2 1999,529, 0,2000, +,+, 397567 LINE CR1 1116 chr3 69663432 69664028 CR1-Y1_Aves 394 - 69663432 69664028 0 2 68,48, 0,548, -,-, 397621 LINE CR1 1116 chr3 69680752 69682162 CR1-F 494 - 69680752 69682162 0 2 1190,209, 0,1201, -,-, 397632 LINE CR1 1116 chr3 69685373 69685452 (CTT)n 360 + 69685373 69685452 0 2 27,6, 0,73, +,+, 397634 Simple_repeat Simple_repeat 1116 chr3 69727603 69728929 CR1-C4 454 + 69727603 69728929 0 2 1239,85, 0,1241, +,+, 397666 LINE CR1 1117 chr3 69738463 69739140 CR1-C4 543 + 69738463 69739140 0 2 319,353, 0,324, +,+, 397676 LINE CR1 1117 chr3 69739142 69740715 CR1-X 214 + 69739142 69740715 0 2 124,1298, 0,275, +,+, 397677 LINE CR1 1117 chr3 69783727 69783819 (TTGTT)n 380 + 69783727 69783819 0 2 10,6, 0,86, +,+, 397722 Simple_repeat Simple_repeat 1117 chr3 69818644 69819378 CR1-E 443 - 69818644 69819378 0 2 609,125, 0,609, -,-, 397760 LINE CR1 1117 chr3 69826547 69827898 CR1-F0 470 - 69826547 69827898 0 2 180,103, 0,1248, -,-, 397769 LINE CR1 1117 chr3 69834550 69835103 GGLTR5B 568 - 69834550 69835103 0 2 165,369, 0,184, -,-, 397779 LTR ERVL 1118 chr3 69912077 69912800 ENS1B-LTR 467 - 69912077 69912800 0 2 416,307, 0,416, -,-, 397869 LTR ERVL 1118 chr3 69912872 69915508 CR1-E 769 + 69912872 69915508 0 4 311,310,99,1581, 0,646,956,1055, +,+,+,+, 397871 LINE CR1 1118 chr3 69957639 69958065 GGLTR5A 354 + 69957639 69958065 0 2 218,124, 0,302, +,+, 397908 LTR ERVL 1118 chr3 69971338 69971821 CR1-Y1_Aves 304 - 69971338 69971821 0 2 228,216, 0,267, -,-, 397920 LINE CR1 1118 chr3 69972673 69974627 GGERV10_LTR 889 - 69972673 69974627 0 4 220,433,1091,210, 0,220,653,1744, -,-,-,-, 397923 LTR ERVL 1118 chr3 69976450 69976750 CR1-Y2_Aves 166 + 69976450 69976750 0 2 196,77, 0,223, +,+, 397924 LINE CR1 1119 chr3 70007437 70007640 Char12Mar1_GG 549 - 70007437 70007640 0 2 86,117, 0,86, -,-, 397969 DNA hAT-Charlie 1119 chr3 70012159 70013377 CR1-E 696 - 70012159 70013377 0 2 366,241, 0,977, -,-, 397974 LINE CR1 1119 chr3 70013941 70014265 GGERV10_LTR 673 - 70013941 70014265 0 2 160,62, 0,262, -,-, 397977 LTR ERVL 1119 chr3 70025970 70027906 CR1-Y4 480 - 70025970 70027906 0 2 1040,369, 0,1567, -,-, 397998 LINE CR1 1119 chr3 70028188 70028828 CR1-X2 227 - 70028188 70028828 0 3 51,26,409, 0,205,231, -,-,-, 398002 LINE CR1 1119 chr3 70095314 70096396 CR1-X1 580 - 70095314 70096396 0 2 70,179, 0,903, -,-, 398082 LINE CR1 1119 chr3 70098368 70098827 GGLTR8B 547 + 70098368 70098827 0 2 287,157, 0,302, +,+, 398091 LTR ERVL 1119 chr3 70115137 70115441 CR1-C4 567 + 70115137 70115441 0 2 49,255, 0,49, +,+, 398118 LINE CR1 1120 chr3 70145795 70146758 CR1-Y2_Aves 180 - 70145795 70146758 0 2 184,750, 0,213, -,-, 398141 LINE CR1 1120 chr3 70183528 70186055 CR1-C4 455 - 70183528 70186055 0 2 530,1347, 0,1180, -,-, 398180 LINE CR1 1120 chr3 70189129 70191417 CR1-X2 264 + 70189129 70191417 0 2 94,803, 0,1485, +,+, 398186 LINE CR1 1120 chr3 70208100 70210047 CR1-H 705 + 70208100 70210047 0 2 41,489, 0,1458, +,+, 398210 LINE CR1 1120 chr3 70208154 70209558 GGLTR3A 921 - 70208154 70209558 0 2 231,301, 0,1103, -,-, 398211 LTR ERVL 1120 chr3 70211188 70211696 GGLTR8B 227 + 70211188 70211696 0 2 133,366, 0,142, +,+, 398214 LTR ERVL 1120 chr3 70226289 70227604 CR1-C3 271 + 70226289 70227604 0 2 194,1121, 0,194, +,+, 398238 LINE CR1 1120 chr3 70231280 70232405 CR1-C4 547 + 70231280 70232405 0 2 318,246, 0,879, +,+, 398241 LINE CR1 1120 chr3 70251169 70251431 GGLTR12A 929 + 70251169 70251431 0 2 36,224, 0,38, +,+, 398264 LTR ERVL 1121 chr3 70260533 70261729 Char12Mar1_GG 542 + 70260533 70261729 0 2 71,1100, 0,96, +,+, 398273 DNA hAT-Charlie 1121 chr3 70272303 70272800 GGLTR3F2 696 + 70272303 70272800 0 2 230,219, 0,278, +,+, 398284 LTR ERVL 1121 chr3 70291636 70292671 CR1-C4 358 + 70291636 70292671 0 2 112,540, 0,495, +,+, 398306 LINE CR1 1121 chr3 70291749 70292131 GGLTR4A 641 + 70291749 70292131 0 2 173,160, 0,222, +,+, 398307 LTR ERVL 1121 chr3 70355092 70356071 CR1-F 931 + 70355092 70356071 0 2 549,430, 0,549, +,+, 398382 LINE CR1 1121 chr3 70356686 70357251 GGLTR12C 460 - 70356686 70357251 0 2 243,101, 0,464, -,-, 398386 LTR ERVL 1121 chr3 70361073 70361903 GGLTR5A 437 - 70361073 70361903 0 2 203,256, 0,574, -,-, 398391 LTR ERVL 1122 chr3 70409963 70411010 GGLTR8A 481 + 70409963 70411010 0 2 526,148, 0,899, +,+, 398434 LTR ERVL 1122 chr3 70418715 70421184 CR1-X 490 + 70418715 70421184 0 2 411,2057, 0,412, +,+, 398442 LINE CR1 1122 chr3 70448396 70448531 (T)n 589 + 70448396 70448531 0 2 51,34, 0,101, +,+, 398479 Simple_repeat Simple_repeat 1123 chr3 70518049 70518106 (ATA)n 370 + 70518049 70518106 0 2 6,12, 0,45, +,+, 398535 Simple_repeat Simple_repeat 1123 chr3 70554857 70555341 CR1-E 251 + 70554857 70555341 0 2 88,393, 0,91, +,+, 398567 LINE CR1 1123 chr3 70566960 70568022 Char12Mar1_GG 588 - 70566960 70568022 0 2 427,129, 0,933, -,-, 398571 DNA hAT-Charlie 1123 chr3 70582312 70582766 CR1-C3 675 + 70582312 70582766 0 2 346,97, 0,357, +,+, 398589 LINE CR1 1123 chr3 70585005 70585658 CR1-D2 598 + 70585005 70585658 0 2 419,199, 0,454, +,+, 398590 LINE CR1 1123 chr3 70626437 70630690 CR1-X2 552 - 70626437 70630690 0 2 21,883, 0,3370, -,-, 398620 LINE CR1 1124 chr3 70674326 70675064 CR1-D2 526 + 70674326 70675064 0 2 251,487, 0,251, +,+, 398654 LINE CR1 1124 chr3 70676666 70677842 CR1-Y 404 - 70676666 70677842 0 2 114,693, 0,483, -,-, 398656 LINE CR1 1124 chr3 70692890 70693328 GGLTR8B 286 - 70692890 70693328 0 2 227,156, 0,282, -,-, 398670 LTR ERVL 1124 chr3 70702029 70702309 GGLTR4A 483 - 70702029 70702309 0 2 126,109, 0,171, -,-, 398676 LTR ERVL 1124 chr3 70762658 70764467 CR1-Y1_Aves 405 - 70762658 70764467 0 2 318,1324, 0,485, -,-, 398732 LINE CR1 1124 chr3 70766021 70766538 Char12Mar1_GG 594 - 70766021 70766538 0 2 215,18, 0,499, -,-, 398735 DNA hAT-Charlie 1125 chr3 70801769 70802205 CR1-C4 590 - 70801769 70802205 0 2 124,312, 0,124, -,-, 398760 LINE CR1 1125 chr3 70887775 70888285 CR1-L3B_Croc 253 - 70887775 70888285 0 2 172,238, 0,272, -,-, 398843 LINE CR1 1125 chr3 70892363 70897570 Char12Mar1_GG 415 - 70892363 70897570 0 2 335,58, 0,5149, -,-, 398852 DNA hAT-Charlie 1125 chr3 70901555 70901937 TguLTR5e 339 + 70901555 70901937 0 2 123,133, 0,249, +,+, 398860 LTR ERVL 1126 chr3 70913378 70915526 CR1-Y1_Aves 435 + 70913378 70915526 0 2 524,456, 0,1692, +,+, 398868 LINE CR1 1126 chr3 70920039 70920094 (TTTGT)n 646 + 70920039 70920094 0 2 12,9, 0,46, +,+, 398873 Simple_repeat Simple_repeat 1126 chr3 70924570 70925056 GGLTR6 549 + 70924570 70925056 0 2 351,112, 0,374, +,+, 398876 LTR ERVL 1126 chr3 70971542 70972431 CR1-X2 228 + 70971542 70972431 0 2 384,254, 0,635, +,+, 398906 LINE CR1 1126 chr3 71021532 71023327 CR1-Y2_Aves 302 + 71021532 71023327 0 2 1294,173, 0,1622, +,+, 398941 LINE CR1 1127 chr3 71055721 71061547 GGERV10_LTR 987 + 71055721 71061547 0 3 220,5385,220, 0,221,5606, +,+,+, 398968 LTR ERVL 1127 chr3 71067730 71067999 CR1-E 304 - 71067730 71067999 0 2 167,100, 0,169, -,-, 398971 LINE CR1 1127 chr3 71073099 71073197 (A)n 833 + 71073099 71073197 0 2 38,26, 0,72, +,+, 398976 Simple_repeat Simple_repeat 1127 chr3 71168318 71169534 CR1-F2 497 - 71168318 71169534 0 2 109,402, 0,814, -,-, 399031 LINE CR1 1128 chr3 71240254 71243194 CR1-E 651 + 71240254 71243194 0 3 478,1159,965, 0,478,1975, +,+,+, 399094 LINE CR1 1129 chr3 71331972 71332989 CR1-F2 535 - 71331972 71332989 0 2 202,563, 0,454, -,-, 399156 LINE CR1 1129 chr3 71351394 71352010 CR1-Y4 448 - 71351394 71352010 0 2 346,57, 0,559, -,-, 399166 LINE CR1 1129 chr3 71363940 71364809 Char12Mar1_GG 587 - 71363940 71364809 0 2 200,201, 0,668, -,-, 399178 DNA hAT-Charlie 1129 chr3 71390846 71391546 CR1-L3B_Croc 352 + 71390846 71391546 0 2 436,43, 0,657, +,+, 399188 LINE CR1 1131 chr3 71591309 71592394 Mariner1_GG 639 - 71591309 71592394 0 2 315,768, 0,317, -,-, 399317 DNA TcMar-Mariner 1131 chr3 71599357 71600960 GGLTR8A 474 + 71599357 71600960 0 2 449,87, 0,1516, +,+, 399319 LTR ERVL 1131 chr3 71599803 71600843 CR1-D2 614 - 71599803 71600843 0 2 453,423, 0,617, -,-, 399320 LINE CR1 1131 chr3 71629224 71630924 Mariner1_GG 575 - 71629224 71630924 0 3 609,380,360, 0,886,1340, -,-,-, 399355 DNA TcMar-Mariner 1131 chr3 71660283 71661061 CR1-Y2_Aves 249 + 71660283 71661061 0 2 598,180, 0,598, +,+, 399369 LINE CR1 1132 chr3 71718278 71718990 CR1-X1 610 + 71718278 71718990 0 2 521,127, 0,585, +,+, 399396 LINE CR1 1132 chr3 71780248 71781361 Mariner1_GG 641 - 71780248 71781361 0 2 106,1007, 0,106, -,-, 399430 DNA TcMar-Mariner 1132 chr3 71815314 71815752 CR1-X2 545 - 71815314 71815752 0 2 371,67, 0,371, -,-, 399447 LINE CR1 1133 chr3 71951418 71952392 Charlie12_GG 664 - 71951418 71952392 0 2 69,365, 0,609, -,-, 399511 DNA hAT-Charlie 1134 chr3 71969265 71969371 (GGCACC)n 308 + 71969265 71969371 0 2 17,37, 0,69, +,+, 399530 Simple_repeat Simple_repeat 1134 chr3 71990777 71991923 CR1-D2 652 - 71990777 71991923 0 2 621,513, 0,633, -,-, 399571 LINE CR1 1134 chr3 72028348 72028517 (TTCC)n 542 + 72028348 72028517 0 2 126,11, 0,158, +,+, 399584 Simple_repeat Simple_repeat 1135 chr3 72141901 72142388 CR1-Y 455 + 72141901 72142388 0 2 126,361, 0,126, +,+, 399644 LINE CR1 1135 chr3 72193176 72194241 REP131 143 - 72193176 72194241 0 3 387,140,416, 0,415,649, -,-,-, 399680 DNA? DNA? 1137 chr3 72384300 72389020 CR1-D 566 + 72384300 72389020 0 2 1226,1580, 0,3140, +,+, 399809 LINE CR1 1138 chr3 72493764 72495887 CR1-Y2_Aves 279 + 72493764 72495887 0 2 246,731, 0,1392, +,+, 399879 LINE CR1 1138 chr3 72529411 72530432 Mariner1_GG 406 - 72529411 72530432 0 2 711,310, 0,711, -,-, 399910 DNA TcMar-Mariner 1138 chr3 72567966 72567999 (TCTTT)n 650 + 72567966 72567999 0 2 7,7, 0,26, +,+, 399928 Simple_repeat Simple_repeat 1138 chr3 72571610 72571698 (T)n 905 + 72571610 72571698 0 2 22,22, 0,66, +,+, 399933 Simple_repeat Simple_repeat 1138 chr3 72593304 72593699 Char12Mar1_GG 654 - 72593304 72593699 0 2 182,208, 0,187, -,-, 399947 DNA hAT-Charlie 1138 chr3 72613050 72613144 A-rich 326 + 72613050 72613144 0 2 17,56, 0,38, +,+, 399959 Low_complexity Low_complexity 1139 chr3 72629653 72630921 CR1-F2 357 + 72629653 72630921 0 2 543,725, 0,543, +,+, 399975 LINE CR1 1139 chr3 72633905 72636525 CR1-C4 663 + 72633905 72636525 0 2 832,1029, 0,1591, +,+, 399977 LINE CR1 1139 chr3 72634737 72635493 ENS1-LTR 441 + 72634737 72635493 0 2 361,388, 0,368, +,+, 399978 LTR ERVL 1139 chr3 72656753 72657370 GGLTR8A 125 - 72656753 72657370 0 2 258,169, 0,448, -,-, 399993 LTR ERVL 1139 chr3 72721053 72721107 (TTGT)n 382 + 72721053 72721107 0 2 11,21, 0,33, +,+, 400039 Simple_repeat Simple_repeat 1140 chr3 72803667 72803749 (A)n 863 + 72803667 72803749 0 2 24,22, 0,60, +,+, 400088 Simple_repeat Simple_repeat 1140 chr3 72827471 72828775 CR1-Y4 428 + 72827471 72828775 0 2 738,566, 0,738, +,+, 400104 LINE CR1 1141 chr3 72909619 72910477 GGLTR8B 460 - 72909619 72910477 0 2 548,310, 0,548, -,-, 400163 LTR ERVL 1141 chr3 72929329 72929600 CR1-F 525 - 72929329 72929600 0 2 71,186, 0,85, -,-, 400174 LINE CR1 1142 chr3 73033438 73033805 CR1-11_Crp 394 - 73033438 73033805 0 2 92,84, 0,283, -,-, 400238 LINE CR1 1142 chr3 73095870 73097230 CR1-Y2_Aves 373 - 73095870 73097230 0 2 243,556, 0,804, -,-, 400275 LINE CR1 1142 chr3 73113934 73115042 Char12Mar1_GG 670 - 73113934 73115042 0 2 706,352, 0,756, -,-, 400283 DNA hAT-Charlie 1143 chr3 73189015 73189118 (CTTT)n 316 + 73189015 73189118 0 2 49,27, 0,76, +,+, 400330 Simple_repeat Simple_repeat 1143 chr3 73195705 73196159 GGLTR8A 469 + 73195705 73196159 0 2 304,146, 0,308, +,+, 400336 LTR ERVL 1143 chr3 73224568 73226213 Char12Mar1_GG 612 - 73224568 73226213 0 2 522,44, 0,1601, -,-, 400358 DNA hAT-Charlie 1143 chr3 73231646 73232665 CR1-Y2_Aves 224 + 73231646 73232665 0 2 109,874, 0,145, +,+, 400363 LINE CR1 1143 chr3 73249666 73249950 CR1-Y1_Aves 441 + 73249666 73249950 0 2 195,89, 0,195, +,+, 400382 LINE CR1 1144 chr3 73281426 73282392 CR1-F 411 + 73281426 73282392 0 2 509,456, 0,510, +,+, 400406 LINE CR1 1144 chr3 73282388 73282841 CR1-F2 564 + 73282388 73282841 0 2 137,313, 0,140, +,+, 400407 LINE CR1 1144 chr3 73295646 73295720 GA-rich 192 + 73295646 73295720 0 2 24,27, 0,47, +,+, 400419 Low_complexity Low_complexity 1144 chr3 73301906 73303774 GGERVL-C-int 711 + 73301906 73303774 0 2 342,1040, 0,828, +,+, 400425 LTR ERVL 1144 chr3 73318691 73319819 CR1-L3A_Croc 178 + 73318691 73319819 0 2 224,441, 0,687, +,+, 400439 LINE CR1 1144 chr3 73323480 73323943 CR1-11_Crp 370 - 73323480 73323943 0 2 71,119, 0,344, -,-, 400443 LINE CR1 1144 chr3 73337925 73338507 CR1-C4 607 - 73337925 73338507 0 2 213,362, 0,220, -,-, 400454 LINE CR1 1145 chr3 73434119 73435647 Char12Mar1_GG 602 - 73434119 73435647 0 2 560,68, 0,1460, -,-, 400520 DNA hAT-Charlie 1145 chr3 73450975 73451729 CR1-Y2_Aves 432 + 73450975 73451729 0 2 66,652, 0,102, +,+, 400534 LINE CR1 1145 chr3 73516951 73517253 CR1-Y2_Aves 332 + 73516951 73517253 0 2 71,165, 0,137, +,+, 400589 LINE CR1 143 chr3 73531012 73531458 CR1-Y3 566 + 73531012 73531458 0 2 378,68, 0,378, +,+, 400597 LINE CR1 1146 chr3 73569849 73572255 CR1-E 429 - 73569849 73572255 0 2 469,185, 0,2221, -,-, 400629 LINE CR1 1146 chr3 73659761 73662115 CR1-Y2_Aves 255 - 73659761 73662115 0 4 163,311,635,337, 0,163,474,2017, -,-,-,-, 400667 LINE CR1 1147 chr3 73688338 73688399 A-rich 452 + 73688338 73688399 0 2 18,14, 0,47, +,+, 400696 Low_complexity Low_complexity 1147 chr3 73713118 73713245 (T)n 779 + 73713118 73713245 0 2 55,27, 0,100, +,+, 400725 Simple_repeat Simple_repeat 1147 chr3 73742213 73743483 CR1-F2 393 + 73742213 73743483 0 2 458,812, 0,458, +,+, 400756 LINE CR1 1147 chr3 73748173 73751411 CR1-F2 406 - 73748173 73751411 0 2 564,113, 0,3125, -,-, 400761 LINE CR1 1147 chr3 73780986 73781273 CR1-D 677 + 73780986 73781273 0 2 226,54, 0,233, +,+, 400789 LINE CR1 1148 chr3 73831070 73831112 (TATACA)n 460 + 73831070 73831112 0 2 7,12, 0,30, +,+, 400841 Simple_repeat Simple_repeat 1148 chr3 73862347 73862520 CR1-X2 538 + 73862347 73862520 0 2 41,119, 0,54, +,+, 400878 LINE CR1 1148 chr3 73887465 73888426 CR1-Y2 487 - 73887465 73888426 0 2 816,122, 0,839, -,-, 400902 LINE CR1 1148 chr3 73895919 73896412 Char12Mar1_GG 642 - 73895919 73896412 0 2 106,335, 0,158, -,-, 400908 DNA hAT-Charlie 1149 chr3 73947222 73949595 CR1-F 453 - 73947222 73949595 0 2 186,187, 0,2186, -,-, 400962 LINE CR1 1149 chr3 73971330 73972578 CR1-11_Crp 186 + 73971330 73972578 0 2 657,117, 0,1131, +,+, 400987 LINE CR1 1149 chr3 73979186 73980487 UCON1 316 - 73979186 73980487 0 2 130,197, 0,1104, -,-, 400997 Unknown Unknown 1149 chr3 73989741 73991428 CR1-X2 226 + 73989741 73991428 0 2 793,663, 0,1024, +,+, 401006 LINE CR1 1150 chr3 74076652 74077708 CR1-Y2_Aves 271 - 74076652 74077708 0 2 378,251, 0,805, -,-, 401078 LINE CR1 1150 chr3 74150352 74151289 L2-1_AMi 161 + 74150352 74151289 0 2 326,137, 0,800, +,+, 401157 LINE L2 1150 chr3 74171530 74171609 (GGAGCA)n 400 + 74171530 74171609 0 2 18,8, 0,71, +,+, 401179 Simple_repeat Simple_repeat 1151 chr3 74260089 74260694 CR1-C4 441 + 74260089 74260694 0 2 108,376, 0,229, +,+, 401233 LINE CR1 1152 chr3 74358421 74360241 CR1-X 215 + 74358421 74360241 0 3 26,218,1014, 0,79,806, +,+,+, 401306 LINE CR1 1153 chr3 74469403 74470371 CR1-C4 502 - 74469403 74470371 0 2 681,287, 0,681, -,-, 401418 LINE CR1 1153 chr3 74475932 74476613 CR1-C4 526 - 74475932 74476613 0 2 622,59, 0,622, -,-, 401424 LINE CR1 1153 chr3 74487502 74488065 CR1-C4 538 - 74487502 74488065 0 2 181,280, 0,283, -,-, 401430 LINE CR1 1153 chr3 74575973 74576805 CR1-C3 636 + 74575973 74576805 0 2 763,50, 0,782, +,+, 401538 LINE CR1 1154 chr3 74583775 74584408 CR1-E 602 + 74583775 74584408 0 2 197,186, 0,447, +,+, 401543 LINE CR1 1154 chr3 74587549 74589106 Mariner1_GG 475 - 74587549 74589106 0 2 572,628, 0,929, -,-, 401547 DNA TcMar-Mariner 1154 chr3 74658812 74659800 GGLTR5B 563 + 74658812 74659800 0 2 64,250, 0,738, +,+, 401619 LTR ERVL 1155 chr3 74748270 74748402 CR1-Y1_Aves 326 - 74748270 74748402 0 2 38,53, 0,79, -,-, 401701 LINE CR1 1155 chr3 74748734 74749699 CR1-Y2_Aves 75 + 74748734 74749699 0 2 351,577, 0,388, +,+, 401703 LINE CR1 1155 chr3 74769304 74770059 GGLTR12C 495 + 74769304 74770059 0 2 109,263, 0,492, +,+, 401716 LTR ERVL 1155 chr3 74770168 74771400 CR1-E 620 + 74770168 74771400 0 2 572,508, 0,724, +,+, 401718 LINE CR1 1155 chr3 74780003 74781005 CR1-H2 554 - 74780003 74781005 0 2 91,106, 0,896, -,-, 401726 LINE CR1 1155 chr3 74780338 74780781 Char12Mar1_GG 476 - 74780338 74780781 0 2 308,123, 0,320, -,-, 401727 DNA hAT-Charlie 1155 chr3 74807635 74808970 GGLTR3F2 876 + 74807635 74808970 0 2 130,356, 0,979, +,+, 401753 LTR ERVL 1155 chr3 74832729 74833313 CR1-Y2 394 - 74832729 74833313 0 2 34,550, 0,34, -,-, 401773 LINE CR1 1156 chr3 74844881 74846272 CR1-D2 615 - 74844881 74846272 0 2 399,86, 0,1305, -,-, 401786 LINE CR1 1156 chr3 74848798 74850006 CR1-D2 588 - 74848798 74850006 0 2 762,446, 0,762, -,-, 401790 LINE CR1 1156 chr3 74852080 74852449 CR1-E 768 - 74852080 74852449 0 2 266,103, 0,266, -,-, 401792 LINE CR1 1156 chr3 74954730 74956229 Charlie12_GG 509 - 74954730 74956229 0 2 317,619, 0,880, -,-, 401877 DNA hAT-Charlie 1156 chr3 74961970 74962798 CR1-X1 366 - 74961970 74962798 0 2 699,115, 0,713, -,-, 401885 LINE CR1 1157 chr3 74986188 74987083 CR1-Y4 617 - 74986188 74987083 0 3 55,194,549, 0,152,346, -,-,-, 401908 LINE CR1 1157 chr3 74987148 74987952 CR1-E 224 - 74987148 74987952 0 2 251,254, 0,550, -,-, 401910 LINE CR1 1157 chr3 74992458 74993291 CR1-Y1_Aves 406 + 74992458 74993291 0 2 572,261, 0,572, +,+, 401913 LINE CR1 1157 chr3 75011569 75012785 GGERVK10-int 878 + 75011569 75012785 0 2 361,855, 0,361, +,+, 401929 LTR ERVK 1157 chr3 75040936 75041013 (A)n 917 + 75040936 75041013 0 2 19,26, 0,51, +,+, 401959 Simple_repeat Simple_repeat 1157 chr3 75057709 75058822 CR1-Y4 473 - 75057709 75058822 0 2 399,203, 0,910, -,-, 401976 LINE CR1 1157 chr3 75098095 75099815 CR1-H2 714 - 75098095 75099815 0 2 106,1614, 0,106, -,-, 402002 LINE CR1 1158 chr3 75170638 75171710 CR1-C4 520 - 75170638 75171710 0 2 567,505, 0,567, -,-, 402052 LINE CR1 1158 chr3 75173223 75174597 CR1-C4 523 + 75173223 75174597 0 3 182,625,403, 0,182,971, +,+,+, 402053 LINE CR1 1158 chr3 75189368 75190432 CR1-Y1_Aves 410 + 75189368 75190432 0 2 153,528, 0,536, +,+, 402065 LINE CR1 1158 chr3 75198302 75200284 CR1-L3A_Croc 115 + 75198302 75200284 0 2 533,402, 0,1580, +,+, 402071 LINE CR1 1159 chr3 75238033 75240291 CR1-F 414 - 75238033 75240291 0 2 2056,202, 0,2056, -,-, 402097 LINE CR1 1159 chr3 75273658 75274930 GGLTR5B 530 + 75273658 75274930 0 2 453,54, 0,1218, +,+, 402117 LTR ERVL 1159 chr3 75277794 75278051 CR1-D2 298 + 75277794 75278051 0 2 104,152, 0,105, +,+, 402126 LINE CR1 1160 chr3 75385091 75386200 CR1-11_Crp 202 + 75385091 75386200 0 2 115,99, 0,1010, +,+, 402200 LINE CR1 1160 chr3 75473326 75473722 CR1-L3A_Croc 201 - 75473326 75473722 0 2 260,110, 0,286, -,-, 402248 LINE CR1 1160 chr3 75473900 75474930 CR1-L3B_Croc 249 - 75473900 75474930 0 3 184,159,183, 0,451,847, -,-,-, 402249 LINE CR1 1160 chr3 75481877 75482189 REP131 267 - 75481877 75482189 0 2 161,45, 0,267, -,-, 402255 DNA? DNA? 1161 chr3 75616946 75618302 CR1-F2 677 - 75616946 75618302 0 2 449,275, 0,1081, -,-, 402318 LINE CR1 1162 chr3 75726114 75727548 CR1-C3 616 + 75726114 75727548 0 2 302,636, 0,798, +,+, 402369 LINE CR1 1162 chr3 75758044 75758105 (TTTTG)n 386 + 75758044 75758105 0 2 13,21, 0,40, +,+, 402382 Simple_repeat Simple_repeat 1163 chr3 75766124 75766525 CR1-E 403 + 75766124 75766525 0 2 81,320, 0,81, +,+, 402389 LINE CR1 1163 chr3 75776709 75777510 CR1-C 877 + 75776709 75777510 0 2 336,465, 0,336, +,+, 402394 LINE CR1 1164 chr3 75895780 75896109 CR1-F2 579 + 75895780 75896109 0 2 68,258, 0,71, +,+, 402463 LINE CR1 1164 chr3 75940665 75941398 CR1-C4 669 - 75940665 75941398 0 2 233,500, 0,233, -,-, 402489 LINE CR1 1164 chr3 75948911 75949728 CR1-C3 577 - 75948911 75949728 0 2 145,269, 0,548, -,-, 402491 LINE CR1 1165 chr3 76050803 76051075 CR1-E 530 - 76050803 76051075 0 2 107,165, 0,107, -,-, 402549 LINE CR1 1165 chr3 76057432 76061651 CR1-C4 445 - 76057432 76061651 0 2 644,96, 0,4123, -,-, 402552 LINE CR1 1166 chr3 76161741 76161978 CR1-G 862 + 76161741 76161978 0 2 120,117, 0,120, +,+, 402604 LINE CR1 1167 chr3 76353851 76354834 CR1-C3 514 - 76353851 76354834 0 2 305,677, 0,306, -,-, 402697 LINE CR1 1167 chr3 76387685 76388398 CR1-11_Crp 262 - 76387685 76388398 0 2 346,166, 0,547, -,-, 402713 LINE CR1 1168 chr3 76461335 76461394 (TGTA)n 278 + 76461335 76461394 0 2 20,6, 0,53, +,+, 402753 Simple_repeat Simple_repeat 1168 chr3 76477259 76477421 CR1-E 802 - 76477259 76477421 0 2 123,39, 0,123, -,-, 402767 LINE CR1 1168 chr3 76488527 76489272 CR1-Y4 715 + 76488527 76489272 0 2 328,45, 0,700, +,+, 402781 LINE CR1 1168 chr3 76492658 76497490 CR1-C4 533 + 76492658 76497490 0 3 153,295,1493, 0,153,3339, +,+,+, 402784 LINE CR1 1168 chr3 76494809 76495408 GGLTR8B 279 + 76494809 76495408 0 2 326,245, 0,354, +,+, 402787 LTR ERVL 1169 chr3 76557376 76558473 CR1-E 693 + 76557376 76558473 0 2 985,38, 0,1059, +,+, 402821 LINE CR1 1169 chr3 76633249 76633319 (GCCGCCC)n 288 + 76633249 76633319 0 2 11,8, 0,62, +,+, 402862 Simple_repeat Simple_repeat 1170 chr3 76689344 76690031 CR1-C4 658 - 76689344 76690031 0 2 216,50, 0,637, -,-, 402886 LINE CR1 1170 chr3 76734476 76736260 CR1-E 545 + 76734476 76736260 0 2 737,557, 0,1227, +,+, 402908 LINE CR1 1170 chr3 76754686 76755035 Char12Mar1_GG 708 - 76754686 76755035 0 2 286,63, 0,286, -,-, 402923 DNA hAT-Charlie 1171 chr3 76823622 76824363 CR1-Y2_Aves 349 - 76823622 76824363 0 3 63,12,434, 0,189,307, -,-,-, 402956 LINE CR1 1172 chr3 76951263 76952239 GGLTR5B 752 + 76951263 76952239 0 2 48,500, 0,476, +,+, 403015 LTR ERVL 1172 chr3 76993556 76994085 CR1-Y2_Aves 401 - 76993556 76994085 0 2 53,473, 0,56, -,-, 403042 LINE CR1 1172 chr3 76999168 77000000 CR1-F 591 + 76999168 77000000 0 2 624,208, 0,624, +,+, 403048 LINE CR1 1172 chr3 77013996 77015610 CR1-C2 799 + 77013996 77015610 0 2 211,914, 0,700, +,+, 403060 LINE CR1 1172 chr3 77038883 77039310 Char12Mar1_GG 658 - 77038883 77039310 0 2 238,166, 0,261, -,-, 403071 DNA hAT-Charlie 1172 chr3 77052349 77053304 CR1-C4 614 + 77052349 77053304 0 2 288,657, 0,298, +,+, 403078 LINE CR1 1174 chr3 77221354 77221761 GGLTR5B 418 - 77221354 77221761 0 2 250,106, 0,301, -,-, 403168 LTR ERVL 1174 chr3 77223546 77224144 GGLTR8B 306 + 77223546 77224144 0 2 420,178, 0,420, +,+, 403169 LTR ERVL 1174 chr3 77313565 77318306 CR1-C4 543 - 77313565 77318306 0 3 123,73,117, 0,3474,4624, -,-,-, 403214 LINE CR1 1174 chr3 77317112 77318199 Char12Mar1_GG 608 - 77317112 77318199 0 2 753,330, 0,757, -,-, 403216 DNA hAT-Charlie 1175 chr3 77413370 77413470 (T)n 784 + 77413370 77413470 0 2 18,32, 0,68, +,+, 403264 Simple_repeat Simple_repeat 1175 chr3 77433386 77434397 CR1-L3B_Croc 139 - 77433386 77434397 0 3 56,30,199, 0,166,812, -,-,-, 403275 LINE CR1 1175 chr3 77461379 77462297 CR1-Y2_Aves 353 + 77461379 77462297 0 2 644,274, 0,644, +,+, 403294 LINE CR1 1176 chr3 77468238 77469119 Char12Mar1_GG 673 - 77468238 77469119 0 2 136,430, 0,451, -,-, 403301 DNA hAT-Charlie 1177 chr3 77617784 77621971 REP131 423 - 77617784 77621971 0 2 121,69, 0,4118, -,-, 403407 DNA? DNA? 1178 chr3 77742274 77746079 GGERVL18-int 673 + 77742274 77746079 0 3 1788,1744,273, 0,1788,3532, +,+,+, 403479 LTR ERVL 1178 chr3 77756862 77757491 Char12Mar1_GG 610 - 77756862 77757491 0 2 69,482, 0,147, -,-, 403482 DNA hAT-Charlie 1178 chr3 77806680 77807294 CR1-Y2_Aves 331 + 77806680 77807294 0 3 160,368,83, 0,163,531, +,+,+, 403518 LINE CR1 1178 chr3 77830661 77831182 CR1-X1 575 - 77830661 77831182 0 2 218,303, 0,218, -,-, 403534 LINE CR1 1178 chr3 77855725 77856634 CR1-Y2_Aves 178 + 77855725 77856634 0 2 608,83, 0,826, +,+, 403543 LINE CR1 1179 chr3 77867525 77867708 GGLTR8A 473 - 77867525 77867708 0 2 77,106, 0,77, -,-, 403548 LTR ERVL 1179 chr3 77964103 77964164 (AAAC)n 820 + 77964103 77964164 0 2 19,9, 0,52, +,+, 403614 Simple_repeat Simple_repeat 1179 chr3 77970830 77975315 CR1-Y4 442 + 77970830 77975315 0 2 91,221, 0,4264, +,+, 403620 LINE CR1 1180 chr3 78115335 78115498 GGLTR3C1 523 - 78115335 78115498 0 2 116,47, 0,116, -,-, 403708 LTR ERVL 1181 chr3 78247597 78248383 CR1-Y2 310 + 78247597 78248383 0 2 197,106, 0,680, +,+, 403766 LINE CR1 1182 chr3 78294588 78294939 L2-1_AMi 400 - 78294588 78294939 0 2 18,104, 0,247, -,-, 403797 LINE L2 1182 chr3 78332749 78333406 CR1-Y2_Aves 371 - 78332749 78333406 0 3 168,116,176, 0,348,481, -,-,-, 403813 LINE CR1 1183 chr3 78424487 78424558 (TTAATA)n 382 + 78424487 78424558 0 2 16,11, 0,60, +,+, 403863 Simple_repeat Simple_repeat 1183 chr3 78472616 78473349 CR1-L3B_Croc 209 + 78472616 78473349 0 2 173,276, 0,457, +,+, 403891 LINE CR1 1183 chr3 78508281 78508689 Char12Mar1_GG 660 - 78508281 78508689 0 2 297,111, 0,297, -,-, 403913 DNA hAT-Charlie 1184 chr3 78562962 78563581 CR1-X2 258 + 78562962 78563581 0 2 192,427, 0,192, +,+, 403944 LINE CR1 1184 chr3 78578529 78582750 CR1-Y2_Aves 167 - 78578529 78582750 0 3 528,123,512, 0,724,3709, -,-,-, 403954 LINE CR1 1185 chr3 78660799 78660877 (AT)n 941 + 78660799 78660877 0 2 21,36, 0,42, +,+, 404006 Simple_repeat Simple_repeat 1185 chr3 78673272 78674829 CR1-Y2_Aves 230 + 78673272 78674829 0 2 213,191, 0,1366, +,+, 404018 LINE CR1 1185 chr3 78686047 78687177 CR1-C4 670 + 78686047 78687177 0 2 851,279, 0,851, +,+, 404026 LINE CR1 1185 chr3 78740376 78740496 (TA)n 336 + 78740376 78740496 0 2 32,46, 0,74, +,+, 404070 Simple_repeat Simple_repeat 1186 chr3 78793913 78794327 GGLTR4B 672 + 78793913 78794327 0 2 253,115, 0,299, +,+, 404101 LTR ERVL 1186 chr3 78823472 78823550 (TTTA)n 276 + 78823472 78823550 0 2 13,24, 0,54, +,+, 404128 Simple_repeat Simple_repeat 1186 chr3 78864749 78864846 (TTTTTG)n 496 + 78864749 78864846 0 2 40,18, 0,79, +,+, 404157 Simple_repeat Simple_repeat 1187 chr3 78917903 78919699 CR1-C3 651 - 78917903 78919699 0 2 336,1457, 0,339, -,-, 404196 LINE CR1 1187 chr3 78931181 78931740 CR1-C4 636 - 78931181 78931740 0 2 194,363, 0,196, -,-, 404208 LINE CR1 1187 chr3 78932581 78932655 (TGTTTG)n 668 + 78932581 78932655 0 2 29,12, 0,62, +,+, 404211 Simple_repeat Simple_repeat 1188 chr3 79045072 79045586 CR1-Y2_Aves 374 + 79045072 79045586 0 2 439,62, 0,452, +,+, 404289 LINE CR1 1188 chr3 79140006 79140797 CR1-C4 535 - 79140006 79140797 0 3 318,396,50, 0,318,741, -,-,-, 404360 LINE CR1 1189 chr3 79204801 79204905 (T)n 1000 + 79204801 79204905 0 2 39,22, 0,82, +,+, 404402 Simple_repeat Simple_repeat 1189 chr3 79207299 79207461 GGLTR8B 550 - 79207299 79207461 0 2 93,69, 0,93, -,-, 404406 LTR ERVL 1189 chr3 79221389 79224564 CR1-X 414 + 79221389 79224564 0 2 87,87, 0,3088, +,+, 404420 LINE CR1 1189 chr3 79227566 79230741 CR1-X 414 + 79227566 79230741 0 2 87,87, 0,3088, +,+, 404432 LINE CR1 1189 chr3 79273278 79274537 CR1-X2 121 + 79273278 79274537 0 2 605,498, 0,761, +,+, 404466 LINE CR1 1190 chr3 79426442 79426839 CR1-D2 659 + 79426442 79426839 0 2 146,251, 0,146, +,+, 404542 LINE CR1 1191 chr3 79470871 79473344 CR1-C4 521 + 79470871 79473344 0 2 1838,341, 0,2132, +,+, 404575 LINE CR1 1191 chr3 79524211 79525723 CR1-C4 460 + 79524211 79525723 0 2 176,174, 0,1338, +,+, 404592 LINE CR1 1191 chr3 79536220 79538448 CR1-Y2 224 - 79536220 79538448 0 3 101,1130,326, 0,101,1902, -,-,-, 404604 LINE CR1 1192 chr3 79563576 79564606 CR1-X1 539 + 79563576 79564606 0 2 153,788, 0,242, +,+, 404619 LINE CR1 1192 chr3 79585847 79586643 CR1-C4 612 + 79585847 79586643 0 2 139,393, 0,403, +,+, 404632 LINE CR1 1192 chr3 79622010 79622791 CR1-Y1_Aves 82 + 79622010 79622791 0 2 309,153, 0,628, +,+, 404662 LINE CR1 1192 chr3 79634575 79634961 TguLTR5e 191 + 79634575 79634961 0 2 175,178, 0,208, +,+, 404667 LTR ERVL 1193 chr3 79800740 79801793 CR1-Y1_Aves 465 + 79800740 79801793 0 2 609,137, 0,916, +,+, 404758 LINE CR1 1193 chr3 79801349 79801654 GGLTR5B 703 - 79801349 79801654 0 2 59,246, 0,59, -,-, 404759 LTR ERVL 1194 chr3 79863109 79863223 GGLTR3B1 441 . 79863109 79863223 0 2 66,48, 0,66, +,-, 404796 LTR ERVL 1194 chr3 79920755 79921367 CR1-Y1_Aves 329 - 79920755 79921367 0 2 509,96, 0,516, -,-, 404836 LINE CR1 1194 chr3 79934354 79934917 GGLTR12C 629 - 79934354 79934917 0 2 103,459, 0,104, -,-, 404846 LTR ERVL 1195 chr3 80064498 80065412 GGERVL-B-int 354 - 80064498 80065412 0 2 196,53, 0,861, -,-, 404920 LTR ERVL 1196 chr3 80095041 80095353 GGLTR11 576 + 80095041 80095353 0 2 62,212, 0,100, +,+, 404936 LTR ERV1 1196 chr3 80106318 80107268 CR1-Y2_Aves 169 + 80106318 80107268 0 2 158,454, 0,496, +,+, 404941 LINE CR1 1196 chr3 80106323 80106752 CR1-Y2_Aves 282 + 80106323 80106752 0 2 166,231, 0,198, +,+, 404942 LINE CR1 1196 chr3 80135578 80137666 CR1-C2 866 - 80135578 80137666 0 2 307,76, 0,2012, -,-, 404966 LINE CR1 1196 chr3 80151087 80151394 GGLTR3A 708 - 80151087 80151394 0 2 50,243, 0,64, -,-, 404972 LTR ERVL 1196 chr3 80194896 80195296 CR1-D2 613 + 80194896 80195296 0 2 290,100, 0,300, +,+, 405000 LINE CR1 1196 chr3 80208912 80209466 CR1-Y2_Aves 207 + 80208912 80209466 0 2 152,251, 0,303, +,+, 405014 LINE CR1 1197 chr3 80238341 80239439 CR1-Y2_Aves 367 + 80238341 80239439 0 2 461,186, 0,912, +,+, 405043 LINE CR1 1197 chr3 80249577 80250664 CR1-Y2_Aves 316 + 80249577 80250664 0 2 471,616, 0,471, +,+, 405053 LINE CR1 1197 chr3 80270658 80271709 CR1-Y1_Aves 328 - 80270658 80271709 0 2 176,578, 0,473, -,-, 405063 LINE CR1 1197 chr3 80270830 80271131 GGLTR5B 569 - 80270830 80271131 0 2 193,104, 0,197, -,-, 405065 LTR ERVL 1197 chr3 80273607 80274011 CR1-H2 606 - 80273607 80274011 0 2 306,98, 0,306, -,-, 405067 LINE CR1 1197 chr3 80303343 80304628 Charlie12_GG 454 - 80303343 80304628 0 2 799,60, 0,1225, -,-, 405091 DNA hAT-Charlie 1198 chr3 80347658 80347721 (A)n 706 + 80347658 80347721 0 2 37,7, 0,56, +,+, 405115 Simple_repeat Simple_repeat 1198 chr3 80349055 80349889 CR1-Y4 597 - 80349055 80349889 0 2 394,440, 0,394, -,-, 405119 LINE CR1 1198 chr3 80428867 80429518 CR1-C4 355 - 80428867 80429518 0 2 285,366, 0,285, -,-, 405169 LINE CR1 1198 chr3 80431837 80432450 GGLTR11-int 589 + 80431837 80432450 0 2 115,189, 0,424, +,+, 405172 LTR ERV1 1199 chr3 80481397 80482264 CR1-F 522 - 80481397 80482264 0 2 206,661, 0,206, -,-, 405210 LINE CR1 1199 chr3 80499325 80499731 GGLTR3C1 541 - 80499325 80499731 0 2 291,104, 0,302, -,-, 405223 LTR ERVL 1199 chr3 80502593 80503200 Char12Mar1_GG 598 - 80502593 80503200 0 2 96,269, 0,338, -,-, 405226 DNA hAT-Charlie 1199 chr3 80530952 80532325 CR1-Y1_Aves 417 + 80530952 80532325 0 2 641,284, 0,1089, +,+, 405260 LINE CR1 1199 chr3 80591189 80592868 Char12Mar1_GG 647 - 80591189 80592868 0 2 176,361, 0,1318, -,-, 405307 DNA hAT-Charlie 1200 chr3 80629875 80630262 CR1-C4 599 - 80629875 80630262 0 2 280,103, 0,284, -,-, 405335 LINE CR1 1200 chr3 80637213 80637324 A-rich 644 + 80637213 80637324 0 2 28,51, 0,60, +,+, 405342 Low_complexity Low_complexity 1200 chr3 80695127 80695712 GGERVL-C-int 843 - 80695127 80695712 0 2 524,61, 0,524, -,-, 405386 LTR ERVL 1201 chr3 80757321 80757977 GGLTR5A 468 + 80757321 80757977 0 2 390,201, 0,455, +,+, 405424 LTR ERVL 1201 chr3 80833097 80833153 (CGGAGG)n 398 + 80833097 80833153 0 2 15,8, 0,48, +,+, 405461 Simple_repeat Simple_repeat 1201 chr3 80852286 80853349 CR1-11_Crp 389 + 80852286 80853349 0 2 90,82, 0,981, +,+, 405474 LINE CR1 1202 chr3 80889818 80890448 CR1-Y1_Aves 377 - 80889818 80890448 0 2 343,287, 0,343, -,-, 405488 LINE CR1 1202 chr3 80925133 80925625 Char12Mar1_GG 666 - 80925133 80925625 0 2 205,270, 0,222, -,-, 405517 DNA hAT-Charlie 1203 chr3 81052672 81053681 CR1-C4 592 - 81052672 81053681 0 2 228,781, 0,228, -,-, 405599 LINE CR1 1203 chr3 81078590 81078754 TguLTR5e 547 - 81078590 81078754 0 2 64,47, 0,117, -,-, 405621 LTR ERVL 1204 chr3 81153201 81153278 (TGTA)n 266 + 81153201 81153278 0 2 42,17, 0,60, +,+, 405667 Simple_repeat Simple_repeat 1204 chr3 81207443 81207902 CR1-F2 458 - 81207443 81207902 0 2 117,342, 0,117, -,-, 405714 LINE CR1 1204 chr3 81226490 81226571 (TA)n 352 + 81226490 81226571 0 2 12,29, 0,52, +,+, 405727 Simple_repeat Simple_repeat 1204 chr3 81230273 81231475 CR1-Y2_Aves 183 + 81230273 81231475 0 2 360,163, 0,1039, +,+, 405730 LINE CR1 1204 chr3 81254838 81255385 CR1-Y1_Aves 395 + 81254838 81255385 0 2 427,116, 0,431, +,+, 405750 LINE CR1 1205 chr3 81363796 81364591 CR1-Y4 536 - 81363796 81364591 0 2 540,255, 0,540, -,-, 405843 LINE CR1 1206 chr3 81402333 81404944 CR1-Y1_Aves 393 - 81402333 81404944 0 3 442,121,195, 0,758,2416, -,-,-, 405876 LINE CR1 1206 chr3 81430365 81435636 CR1-F2 581 - 81430365 81435636 0 2 65,209, 0,5062, -,-, 405892 LINE CR1 1206 chr3 81454520 81455288 CR1-Y2_Aves 191 + 81454520 81455288 0 2 93,340, 0,428, +,+, 405910 LINE CR1 1206 chr3 81485352 81485712 CR1-X1 476 - 81485352 81485712 0 2 318,42, 0,318, -,-, 405930 LINE CR1 1206 chr3 81518295 81519179 CR1-C 643 - 81518295 81519179 0 2 499,385, 0,499, -,-, 405953 LINE CR1 1206 chr3 81521438 81521811 CR1-D 228 + 81521438 81521811 0 2 99,130, 0,243, +,+, 405956 LINE CR1 1207 chr3 81571179 81572703 CR1-C4 643 + 81571179 81572703 0 2 59,589, 0,935, +,+, 405987 LINE CR1 1207 chr3 81581363 81584637 CR1-X2 560 - 81581363 81584637 0 2 169,619, 0,2655, -,-, 405999 LINE CR1 1207 chr3 81643726 81644848 CR1-X2 592 - 81643726 81644848 0 2 101,1021, 0,101, -,-, 406031 LINE CR1 1208 chr3 81694819 81699352 GGERVK1-int 984 + 81694819 81699352 0 2 241,4292, 0,241, +,+, 406055 LTR ERVK 1210 chr3 81952935 81953314 GGLTR5B 273 - 81952935 81953314 0 2 224,109, 0,270, -,-, 406191 LTR ERVL 1210 chr3 82006378 82007145 CR1-C4 595 - 82006378 82007145 0 2 210,199, 0,568, -,-, 406219 LINE CR1 1212 chr3 82187586 82189281 X13_LINE 175 - 82187586 82189281 0 2 87,383, 0,1312, -,-, 406339 LINE L2 1212 chr3 82247576 82248199 CR1-11_Crp 223 - 82247576 82248199 0 2 173,407, 0,216, -,-, 406374 LINE CR1 1212 chr3 82267826 82269692 CR1-Y2_Aves 265 - 82267826 82269692 0 2 1091,647, 0,1219, -,-, 406384 LINE CR1 1212 chr3 82286877 82287003 MER133B 347 . 82286877 82287003 0 2 103,23, 0,103, -,+, 406393 DNA? DNA? 1213 chr3 82381273 82382338 CR1-Y2_Aves 505 + 82381273 82382338 0 2 89,46, 0,1019, +,+, 406446 LINE CR1 1213 chr3 82420609 82421210 CR1-L3B_Croc 298 - 82420609 82421210 0 2 172,154, 0,447, -,-, 406472 LINE CR1 1214 chr3 82467677 82467922 CR1-Y2 371 + 82467677 82467922 0 2 81,161, 0,84, +,+, 406504 LINE CR1 1214 chr3 82537650 82538262 CR1-C4 640 + 82537650 82538262 0 2 542,70, 0,542, +,+, 406550 LINE CR1 1214 chr3 82564448 82564738 CR1-X1 712 + 82564448 82564738 0 2 77,213, 0,77, +,+, 406565 LINE CR1 1215 chr3 82675099 82675525 TguLTR5e 415 + 82675099 82675525 0 2 223,109, 0,317, +,+, 406614 LTR ERVL 1215 chr3 82686812 82687360 L2-3_Crp 199 - 82686812 82687360 0 2 56,83, 0,465, -,-, 406623 LINE L2 1216 chr3 82710823 82713209 CR1-D 708 + 82710823 82713209 0 2 629,1445, 0,941, +,+, 406637 LINE CR1 1216 chr3 82748018 82748475 CR1-X1 597 - 82748018 82748475 0 2 317,139, 0,318, -,-, 406667 LINE CR1 1216 chr3 82765194 82765668 CR1-Y2_Aves 140 - 82765194 82765668 0 2 307,32, 0,442, -,-, 406683 LINE CR1 1216 chr3 82804461 82804844 CR1-E 634 - 82804461 82804844 0 2 339,44, 0,339, -,-, 406711 LINE CR1 1216 chr3 82826579 82827442 CR1-Y4 583 + 82826579 82827442 0 2 345,515, 0,348, +,+, 406721 LINE CR1 1217 chr3 82879991 82880045 (TTTTTC)n 490 + 82879991 82880045 0 2 10,8, 0,46, +,+, 406741 Simple_repeat Simple_repeat 1217 chr3 82891544 82892398 CR1-Y2_Aves 341 + 82891544 82892398 0 2 360,492, 0,362, +,+, 406749 LINE CR1 1217 chr3 82915453 82917141 TguLTR5e 412 + 82915453 82917141 0 2 403,129, 0,1559, +,+, 406763 LTR ERVL 1217 chr3 82915856 82917005 CR1-X2 221 - 82915856 82917005 0 2 159,990, 0,159, -,-, 406764 LINE CR1 1217 chr3 82917634 82922116 CR1-Y2_Aves 240 - 82917634 82922116 0 3 133,955,294, 0,2184,4188, -,-,-, 406765 LINE CR1 1218 chr3 83007673 83008985 CR1-X2 515 + 83007673 83008985 0 2 968,344, 0,968, +,+, 406816 LINE CR1 1218 chr3 83029681 83030290 L2-1_AMi 100 + 83029681 83030290 0 2 289,103, 0,506, +,+, 406828 LINE L2 1218 chr3 83067560 83069200 CR1-Y3 143 + 83067560 83069200 0 2 1172,197, 0,1443, +,+, 406847 LINE CR1 1218 chr3 83068294 83068985 CR1-Y2 206 + 83068294 83068985 0 2 515,123, 0,568, +,+, 406848 LINE CR1 1218 chr3 83070487 83070778 CR1-H2 898 + 83070487 83070778 0 2 249,32, 0,259, +,+, 406850 LINE CR1 1218 chr3 83078378 83078834 CR1-X2 647 + 83078378 83078834 0 2 258,196, 0,260, +,+, 406852 LINE CR1 1218 chr3 83083650 83084353 CR1-Y3 738 - 83083650 83084353 0 2 594,109, 0,594, -,-, 406856 LINE CR1 1218 chr3 83088486 83089116 Mariner1b_GG 622 - 83088486 83089116 0 2 291,249, 0,381, -,-, 406858 DNA TcMar-Mariner 1220 chr3 83330543 83331982 CR1-Y2_Aves 97 - 83330543 83331982 0 2 498,283, 0,1156, -,-, 406994 LINE CR1 1221 chr3 83445771 83446625 CR1-Y2_Aves 126 - 83445771 83446625 0 2 113,513, 0,341, -,-, 407050 LINE CR1 1221 chr3 83453157 83453796 CR1-D2 390 + 83453157 83453796 0 2 182,457, 0,182, +,+, 407053 LINE CR1 1221 chr3 83454589 83455259 CR1-D2 527 + 83454589 83455259 0 2 355,302, 0,368, +,+, 407055 LINE CR1 1221 chr3 83466899 83467331 CR1-Y1_Aves 404 + 83466899 83467331 0 2 124,272, 0,160, +,+, 407060 LINE CR1 1221 chr3 83485579 83486777 CR1-F0 329 + 83485579 83486777 0 2 167,160, 0,1038, +,+, 407070 LINE CR1 1222 chr3 83498531 83499445 CR1-C4 571 - 83498531 83499445 0 2 495,419, 0,495, -,-, 407077 LINE CR1 1222 chr3 83544839 83549458 CR1-F2 369 - 83544839 83549458 0 3 641,431,419, 0,1807,4200, -,-,-, 407105 LINE CR1 1223 chr3 83643092 83645169 CR1-X 437 + 83643092 83645169 0 3 90,64,113, 0,548,1964, +,+,+, 407175 LINE CR1 1223 chr3 83645136 83646013 CR1-C4 418 + 83645136 83646013 0 2 264,613, 0,264, +,+, 407181 LINE CR1 1223 chr3 83649974 83650464 UCON28c 358 + 83649974 83650464 0 2 147,83, 0,407, +,+, 407187 Unknown Unknown 1223 chr3 83691421 83691598 CR1-F2 724 - 83691421 83691598 0 2 45,132, 0,45, -,-, 407216 LINE CR1 1224 chr3 83834173 83835249 MER130 121 - 83834173 83835249 0 2 304,212, 0,864, -,-, 407333 DNA DNA 1224 chr3 83843707 83844774 GGLTR5A 502 + 83843707 83844774 0 2 58,89, 0,978, +,+, 407340 LTR ERVL 1224 chr3 83866905 83867306 GGLTR4B 685 - 83866905 83867306 0 2 120,242, 0,159, -,-, 407361 LTR ERVL 1224 chr3 83874529 83875556 Mariner1_GG 618 - 83874529 83875556 0 2 315,705, 0,322, -,-, 407367 DNA TcMar-Mariner 1225 chr3 83909684 83910186 TguLTR5e 337 - 83909684 83910186 0 2 136,265, 0,237, -,-, 407395 LTR ERVL 1225 chr3 83938779 83939799 CR1-F2 439 - 83938779 83939799 0 2 700,320, 0,700, -,-, 407413 LINE CR1 1225 chr3 84012742 84013100 GGLTR5A 416 + 84012742 84013100 0 2 58,295, 0,63, +,+, 407481 LTR ERVL 1225 chr3 84014097 84016904 CR1-D2 528 - 84014097 84016904 0 3 948,865,114, 0,1828,2693, -,-,-, 407484 LINE CR1 1226 chr3 84036041 84037581 Mariner1_GG 584 - 84036041 84037581 0 2 631,160, 0,1380, -,-, 407500 DNA TcMar-Mariner 1226 chr3 84059424 84060806 CR1-E 494 - 84059424 84060806 0 2 479,384, 0,998, -,-, 407519 LINE CR1 1226 chr3 84100935 84101777 GGLTR12B 618 - 84100935 84101777 0 2 212,613, 0,229, -,-, 407566 LTR ERVL 1226 chr3 84117866 84118995 GGLTR5B 326 - 84117866 84118995 0 2 180,371, 0,758, -,-, 407586 LTR ERVL 1226 chr3 84125089 84125413 GGERV10_LTR 501 - 84125089 84125413 0 2 158,74, 0,250, -,-, 407593 LTR ERVL 1227 chr3 84159731 84163025 CR1-G 830 + 84159731 84163025 0 2 180,1360, 0,1934, +,+, 407635 LINE CR1 1227 chr3 84230821 84231195 (TTCCC)n 892 + 84230821 84231195 0 2 178,180, 0,194, +,+, 407702 Simple_repeat Simple_repeat 1227 chr3 84253139 84253964 CR1-Y1_Aves 413 - 84253139 84253964 0 2 477,348, 0,477, -,-, 407729 LINE CR1 1227 chr3 84260359 84260415 (ATTT)n 520 + 84260359 84260415 0 2 7,12, 0,44, +,+, 407735 Simple_repeat Simple_repeat 1228 chr3 84301181 84303995 CR1-C4 403 + 84301181 84303995 0 3 138,72,917, 0,1825,1897, +,+,+, 407778 LINE CR1 1228 chr3 84327913 84328480 CR1-D2 567 + 84327913 84328480 0 2 290,276, 0,291, +,+, 407808 LINE CR1 1228 chr3 84345261 84346740 CR1-Y1_Aves 343 - 84345261 84346740 0 2 172,314, 0,1165, -,-, 407823 LINE CR1 1228 chr3 84366310 84368019 CR1-Y4 485 + 84366310 84368019 0 2 112,362, 0,1347, +,+, 407844 LINE CR1 1228 chr3 84371912 84372832 CR1-X2 518 + 84371912 84372832 0 2 340,580, 0,340, +,+, 407855 LINE CR1 1228 chr3 84376838 84377922 CR1-H 669 + 84376838 84377922 0 2 502,206, 0,878, +,+, 407860 LINE CR1 1228 chr3 84379570 84380877 CR1-H2 727 - 84379570 84380877 0 3 35,205,72, 0,547,1235, -,-,-, 407862 LINE CR1 1228 chr3 84403899 84404668 CR1-H 562 + 84403899 84404668 0 2 86,154, 0,615, +,+, 407887 LINE CR1 1229 chr3 84423562 84424872 CR1-C2 548 + 84423562 84424872 0 2 135,294, 0,1016, +,+, 407907 LINE CR1 1229 chr3 84449974 84452001 Char12Mar1_GG 676 - 84449974 84452001 0 2 352,123, 0,1904, -,-, 407936 DNA hAT-Charlie 1229 chr3 84484882 84485196 GGLTR9 558 - 84484882 84485196 0 2 101,175, 0,139, -,-, 407980 LTR ERVL 1229 chr3 84488740 84489142 GGLTR5A 300 + 84488740 84489142 0 2 248,68, 0,334, +,+, 407987 LTR ERVL 1229 chr3 84496283 84498775 GGERVL-C-int 676 - 84496283 84498775 0 2 491,2001, 0,491, -,-, 407993 LTR ERVL 1229 chr3 84521690 84522434 CR1-X2 448 - 84521690 84522434 0 2 289,273, 0,471, -,-, 408015 LINE CR1 1229 chr3 84522739 84523539 CR1-Y4 132 + 84522739 84523539 0 2 121,639, 0,161, +,+, 408017 LINE CR1 1230 chr3 84549948 84553002 CR1-G 705 + 84549948 84553002 0 3 72,281,1346, 0,409,1708, +,+,+, 408040 LINE CR1 1230 chr3 84564887 84565230 GGLTR5B 640 - 84564887 84565230 0 2 136,167, 0,176, -,-, 408050 LTR ERVL 1230 chr3 84600362 84600738 Mariner1b_GG 555 - 84600362 84600738 0 2 172,196, 0,180, -,-, 408089 DNA TcMar-Mariner 1230 chr3 84605711 84606542 CR1-X2 656 + 84605711 84606542 0 2 544,34, 0,797, +,+, 408097 LINE CR1 1230 chr3 84607231 84607313 (ATAA)n 252 + 84607231 84607313 0 2 31,11, 0,71, +,+, 408101 Simple_repeat Simple_repeat 1230 chr3 84609642 84610708 CR1-C4 547 + 84609642 84610708 0 2 189,276, 0,790, +,+, 408104 LINE CR1 1230 chr3 84620076 84621037 CR1-X2 535 + 84620076 84621037 0 2 130,653, 0,308, +,+, 408117 LINE CR1 1230 chr3 84624371 84624788 Char12Mar1_GG 603 - 84624371 84624788 0 2 265,150, 0,267, -,-, 408124 DNA hAT-Charlie 1230 chr3 84643523 84644269 CR1-C 846 - 84643523 84644269 0 2 506,229, 0,517, -,-, 408143 LINE CR1 1230 chr3 84644733 84652918 Char12Mar1_GG 595 - 84644733 84652918 0 2 332,264, 0,7921, -,-, 408144 DNA hAT-Charlie 153 chr3 84671141 84673277 CR1-H 831 - 84671141 84673277 0 2 927,1198, 0,938, -,-, 408174 LINE CR1 1231 chr3 84674877 84676544 CR1-X2 369 + 84674877 84676544 0 2 246,844, 0,823, +,+, 408175 LINE CR1 1231 chr3 84677298 84679828 CR1-F 583 + 84677298 84679828 0 3 525,508,968, 0,572,1562, +,+,+, 408180 LINE CR1 1231 chr3 84757824 84758910 CR1-F2 573 + 84757824 84758910 0 2 170,761, 0,325, +,+, 408280 LINE CR1 1231 chr3 84759817 84760467 CR1-D 411 - 84759817 84760467 0 2 75,549, 0,101, -,-, 408286 LINE CR1 1231 chr3 84777148 84778060 Char12Mar1_GG 478 + 84777148 84778060 0 2 384,483, 0,429, +,+, 408305 DNA hAT-Charlie 1231 chr3 84784552 84786317 CR1-G 807 + 84784552 84786317 0 2 419,1346, 0,419, +,+, 408314 LINE CR1 1231 chr3 84795559 84795719 CR1-G 795 + 84795559 84795719 0 2 43,117, 0,43, +,+, 408326 LINE CR1 1232 chr3 84831592 84834396 CR1-X2 339 + 84831592 84834396 0 2 161,533, 0,2271, +,+, 408377 LINE CR1 1232 chr3 84832884 84833846 ENS1B-LTR 370 + 84832884 84833846 0 2 547,380, 0,582, +,+, 408380 LTR ERVL 1232 chr3 84840635 84841410 CR1-D2 464 - 84840635 84841410 0 2 323,452, 0,323, -,-, 408384 LINE CR1 1232 chr3 84851057 84851653 GGLTR3A 871 + 84851057 84851653 0 2 541,55, 0,541, +,+, 408391 LTR ERVL 1232 chr3 84867653 84870441 CR1-Y 421 - 84867653 84870441 0 2 1440,786, 0,2002, -,-, 408412 LINE CR1 1232 chr3 84875841 84877313 CR1-D 662 - 84875841 84877313 0 2 782,690, 0,782, -,-, 408420 LINE CR1 1232 chr3 84892141 84896147 Mariner1_GG 530 - 84892141 84896147 0 2 502,779, 0,3227, -,-, 408436 DNA TcMar-Mariner 1232 chr3 84907217 84911222 Mariner1_GG 530 - 84907217 84911222 0 2 502,779, 0,3226, -,-, 408448 DNA TcMar-Mariner 1233 chr3 84976117 84976646 CR1-Y4 559 - 84976117 84976646 0 2 65,256, 0,273, -,-, 408529 LINE CR1 1233 chr3 84984172 84984268 GGLTR3B4 595 . 84984172 84984268 0 2 58,38, 0,58, +,-, 408541 LTR ERVL 1233 chr3 84998862 84999054 ENS1B-LTR 948 - 84998862 84999054 0 2 158,34, 0,158, -,-, 408556 LTR ERVL 1233 chr3 85000000 85000241 CR1-C3 454 + 85000000 85000241 0 2 177,22, 0,219, +,+, 408559 LINE CR1 1233 chr3 85010848 85011177 GGLTR6 527 + 85010848 85011177 0 2 269,60, 0,269, +,+, 408573 LTR ERVL 1233 chr3 85014947 85016105 CR1-C4 571 - 85014947 85016105 0 2 232,390, 0,768, -,-, 408579 LINE CR1 1233 chr3 85020851 85021449 CR1-X2 536 + 85020851 85021449 0 2 495,101, 0,497, +,+, 408587 LINE CR1 1233 chr3 85029449 85029778 GGERV10_LTR 580 - 85029449 85029778 0 2 159,81, 0,248, -,-, 408602 LTR ERVL 1233 chr3 85032214 85038027 GGLTR3F1 898 + 85032214 85038027 0 2 493,5319, 0,494, +,+, 408605 LTR ERVL 1233 chr3 85038027 85038557 GGLTR3F1 938 + 85038027 85038557 0 2 36,494, 0,36, +,+, 408606 LTR ERVL 1234 chr3 85085471 85086938 CR1-F2 717 - 85085471 85086938 0 2 1165,44, 0,1423, -,-, 408656 LINE CR1 1234 chr3 85117349 85118568 CR1-B 912 - 85117349 85118568 0 2 960,259, 0,960, -,-, 408694 LINE CR1 1234 chr3 85156351 85158313 CR1-Y2_Aves 204 - 85156351 85158313 0 4 130,80,159,608, 0,130,266,1354, -,-,-,-, 408723 LINE CR1 154 chr3 85195365 85197131 CR1-F2 503 - 85195365 85197131 0 2 161,138, 0,1628, -,-, 408757 LINE CR1 1235 chr3 85242063 85245436 CR1-D2 686 + 85242063 85245436 0 2 15,48, 0,3325, +,+, 408807 LINE CR1 1235 chr3 85242078 85242258 CR1-C2 748 + 85242078 85242258 0 2 56,124, 0,56, +,+, 408808 LINE CR1 1235 chr3 85249185 85250278 Mariner1_GG 522 - 85249185 85250278 0 2 217,875, 0,218, -,-, 408812 DNA TcMar-Mariner 1235 chr3 85286659 85287714 Mariner1_GG 573 - 85286659 85287714 0 2 925,123, 0,932, -,-, 408835 DNA TcMar-Mariner 1235 chr3 85294502 85295414 CR1-X1 551 + 85294502 85295414 0 2 101,668, 0,244, +,+, 408843 LINE CR1 1235 chr3 85295410 85295738 Mariner1_GG 570 - 85295410 85295738 0 2 58,270, 0,58, -,-, 408845 DNA TcMar-Mariner 1235 chr3 85314141 85314663 CR1-C2 497 - 85314141 85314663 0 2 75,106, 0,416, -,-, 408865 LINE CR1 1235 chr3 85320305 85321111 CR1-Y1_Aves 457 + 85320305 85321111 0 2 104,442, 0,364, +,+, 408875 LINE CR1 1235 chr3 85320410 85320662 CR1-Y2 620 - 85320410 85320662 0 2 232,20, 0,232, -,-, 408876 LINE CR1 1236 chr3 85373959 85376356 CR1-E 737 - 85373959 85376356 0 2 1578,67, 0,2330, -,-, 408933 LINE CR1 1236 chr3 85387574 85388116 CR1-Y2_Aves 148 + 85387574 85388116 0 2 146,184, 0,358, +,+, 408937 LINE CR1 1236 chr3 85404471 85404546 (TTTAGTT)n 486 + 85404471 85404546 0 2 20,9, 0,66, +,+, 408950 Simple_repeat Simple_repeat 1236 chr3 85414140 85414901 CR1-Y2_Aves 391 + 85414140 85414901 0 2 64,125, 0,636, +,+, 408965 LINE CR1 1236 chr3 85415091 85415420 GGLTR8B 595 + 85415091 85415420 0 2 131,198, 0,131, +,+, 408967 LTR ERVL 1236 chr3 85433453 85434560 CR1-F2 304 + 85433453 85434560 0 2 214,452, 0,655, +,+, 408977 LINE CR1 1236 chr3 85437854 85438476 CR1-Y2_Aves 305 + 85437854 85438476 0 3 111,209,234, 0,178,388, +,+,+, 408983 LINE CR1 1236 chr3 85455027 85456513 GGLTR8B 492 + 85455027 85456513 0 2 744,307, 0,1179, +,+, 409001 LTR ERVL 1236 chr3 85457337 85457926 Char12Mar1_GG 552 - 85457337 85457926 0 2 338,214, 0,375, -,-, 409003 DNA hAT-Charlie 1237 chr3 85466658 85468520 GGLTR8B 295 - 85466658 85468520 0 3 52,159,415, 0,1138,1447, -,-,-, 409009 LTR ERVL 1237 chr3 85470368 85471490 GGERVL-C-int 787 - 85470368 85471490 0 2 495,627, 0,495, -,-, 409012 LTR ERVL 1237 chr3 85481645 85482288 CR1-D2 669 - 85481645 85482288 0 2 35,608, 0,35, -,-, 409023 LINE CR1 1237 chr3 85509383 85510483 CR1-Y2_Aves 269 + 85509383 85510483 0 2 151,807, 0,293, +,+, 409045 LINE CR1 1237 chr3 85542384 85544174 CR1-C4 605 - 85542384 85544174 0 2 43,745, 0,1045, -,-, 409062 LINE CR1 1237 chr3 85583141 85583461 GGERV28_LTR 853 + 85583141 85583461 0 2 154,166, 0,154, +,+, 409096 LTR ERVK 1238 chr3 85612158 85615634 GGLTR3F1 896 - 85612158 85615634 0 2 494,2982, 0,494, -,-, 409112 LTR ERVL 1238 chr3 85648710 85649324 GGLTR5A 498 - 85648710 85649324 0 2 295,292, 0,322, -,-, 409143 LTR ERVL 1238 chr3 85653295 85653678 CR1-Y2_Aves 261 + 85653295 85653678 0 2 235,84, 0,299, +,+, 409147 LINE CR1 1238 chr3 85653714 85654141 GGLTR8B 362 - 85653714 85654141 0 2 73,287, 0,140, -,-, 409148 LTR ERVL 1238 chr3 85657242 85663068 GGERV10_LTR 992 - 85657242 85663068 0 3 220,5385,220, 0,220,5606, -,-,-, 409154 LTR ERVL 1239 chr3 85724424 85724982 CR1-X1 586 - 85724424 85724982 0 3 136,162,136, 0,244,422, -,-,-, 409203 LINE CR1 1239 chr3 85725953 85727304 CR1-E 409 + 85725953 85727304 0 3 452,149,443, 0,746,908, +,+,+, 409207 LINE CR1 1239 chr3 85775456 85776512 CR1-F2 626 + 85775456 85776512 0 2 411,40, 0,1016, +,+, 409236 LINE CR1 1239 chr3 85777175 85778174 CR1-Y2_Aves 299 - 85777175 85778174 0 2 179,765, 0,234, -,-, 409238 LINE CR1 1239 chr3 85786832 85788244 Charlie12_GG 572 - 85786832 85788244 0 2 658,465, 0,947, -,-, 409244 DNA hAT-Charlie 1239 chr3 85788260 85788567 Charlie12_GG 368 - 85788260 85788567 0 2 128,62, 0,245, -,-, 409246 DNA hAT-Charlie 1239 chr3 85807488 85810832 GGLTR10B 941 + 85807488 85810832 0 3 381,2577,381, 0,383,2963, +,+,+, 409261 LTR ERVK 1239 chr3 85818273 85819041 CR1-C4 532 + 85818273 85819041 0 2 72,696, 0,72, +,+, 409267 LINE CR1 1240 chr3 85852957 85853455 TguLTR5d 384 - 85852957 85853455 0 2 121,80, 0,418, -,-, 409285 LTR ERVL 1240 chr3 85917007 85917130 (TCTCTT)n 292 + 85917007 85917130 0 2 19,41, 0,82, +,+, 409333 Simple_repeat Simple_repeat 1240 chr3 85924275 85924481 CR1-Y4 493 - 85924275 85924481 0 2 131,72, 0,134, -,-, 409337 LINE CR1 1240 chr3 85930410 85930687 CR1-X1 710 + 85930410 85930687 0 2 84,189, 0,88, +,+, 409343 LINE CR1 1241 chr3 85988203 85988896 CR1-L3B_Croc 111 + 85988203 85988896 0 2 253,354, 0,339, +,+, 409374 LINE CR1 1241 chr3 85997047 85997854 GGLTR8B 577 + 85997047 85997854 0 2 74,385, 0,422, +,+, 409380 LTR ERVL 1241 chr3 86036562 86037196 CR1-C4 633 + 86036562 86037196 0 2 87,547, 0,87, +,+, 409407 LINE CR1 1241 chr3 86084023 86085380 CR1-Y2 739 - 86084023 86085380 0 2 208,738, 0,619, -,-, 409438 LINE CR1 1241 chr3 86109929 86110360 CR1-C4 671 + 86109929 86110360 0 2 191,240, 0,191, +,+, 409463 LINE CR1 1242 chr3 86181546 86182618 ENS1-int 870 - 86181546 86182618 0 2 825,247, 0,825, -,-, 409509 LTR ERVL 1242 chr3 86218259 86218300 (TTCT)n 510 + 86218259 86218300 0 2 13,9, 0,32, +,+, 409542 Simple_repeat Simple_repeat 1243 chr3 86281481 86282116 GGLTR8B 171 + 86281481 86282116 0 2 330,305, 0,330, +,+, 409601 LTR ERVL 1243 chr3 86289105 86289406 GGLTR8A 571 - 86289105 86289406 0 2 41,174, 0,127, -,-, 409606 LTR ERVL 1243 chr3 86327737 86328070 CR1-Y2_Aves 286 + 86327737 86328070 0 2 131,202, 0,131, +,+, 409632 LINE CR1 1243 chr3 86346546 86346841 GGERV10_LTR 668 - 86346546 86346841 0 2 159,38, 0,257, -,-, 409648 LTR ERVL 1244 chr3 86391313 86392709 GGLTR8B 484 + 86391313 86392709 0 2 271,778, 0,618, +,+, 409677 LTR ERVL 1244 chr3 86425787 86426914 CR1-E 528 - 86425787 86426914 0 2 803,182, 0,945, -,-, 409701 LINE CR1 1244 chr3 86475085 86475141 (TTTTTG)n 470 + 86475085 86475141 0 2 23,11, 0,45, +,+, 409735 Simple_repeat Simple_repeat 1244 chr3 86498180 86499171 CR1-C4 388 + 86498180 86499171 0 2 292,699, 0,292, +,+, 409751 LINE CR1 1245 chr3 86577557 86578361 CR1-D2 687 - 86577557 86578361 0 2 153,302, 0,502, -,-, 409807 LINE CR1 1245 chr3 86599334 86599656 CR1-Y2_Aves 378 - 86599334 86599656 0 2 197,92, 0,230, -,-, 409819 LINE CR1 1245 chr3 86612345 86612967 CR1-X2 462 + 86612345 86612967 0 2 338,234, 0,388, +,+, 409829 LINE CR1 1245 chr3 86632378 86634878 CR1-F 532 + 86632378 86634878 0 2 490,2010, 0,490, +,+, 409841 LINE CR1 1246 chr3 86743329 86743394 (TTATT)n 448 + 86743329 86743394 0 2 20,16, 0,49, +,+, 409910 Simple_repeat Simple_repeat 1247 chr3 86839655 86839760 (TTG)n 432 + 86839655 86839760 0 2 60,26, 0,79, +,+, 409971 Simple_repeat Simple_repeat 1247 chr3 86844620 86845030 GGLTR8B 228 - 86844620 86845030 0 2 230,180, 0,230, -,-, 409974 LTR ERVL 1248 chr3 86908431 86908665 CR1-C2 755 + 86908431 86908665 0 2 151,83, 0,151, +,+, 410010 LINE CR1 1248 chr3 87011128 87011877 CR1-F2 652 + 87011128 87011877 0 2 74,100, 0,649, +,+, 410064 LINE CR1 1248 chr3 87023415 87023962 CR1-Y2_Aves 184 + 87023415 87023962 0 2 236,137, 0,410, +,+, 410073 LINE CR1 1249 chr3 87108011 87108729 CR1-Y1_Aves 397 - 87108011 87108729 0 2 131,583, 0,135, -,-, 410127 LINE CR1 1249 chr3 87141581 87144056 CR1-D 524 + 87141581 87144056 0 2 124,1593, 0,882, +,+, 410153 LINE CR1 1250 chr3 87210034 87211425 CR1-D 594 - 87210034 87211425 0 2 344,1047, 0,344, -,-, 410194 LINE CR1 1251 chr3 87297076 87298830 CR1-Y1_Aves 393 - 87297076 87298830 0 2 801,642, 0,1112, -,-, 410228 LINE CR1 1251 chr3 87375246 87376013 GGLTR8B 262 - 87375246 87376013 0 2 452,117, 0,650, -,-, 410262 LTR ERVL 1251 chr3 87418919 87419942 Mariner1_GG 469 - 87418919 87419942 0 2 418,573, 0,450, -,-, 410280 DNA TcMar-Mariner 1252 chr3 87517733 87518411 CR1-C4 539 - 87517733 87518411 0 2 529,149, 0,529, -,-, 410330 LINE CR1 1253 chr3 87641061 87642877 CR1-C 197 + 87641061 87642877 0 3 98,182,384, 0,446,1432, +,+,+, 410421 LINE CR1 1253 chr3 87650736 87651888 CR1-D2 624 + 87650736 87651888 0 2 529,316, 0,836, +,+, 410429 LINE CR1 1254 chr3 87767032 87769811 CR1-Y4 380 - 87767032 87769811 0 2 1755,1024, 0,1755, -,-, 410504 LINE CR1 1254 chr3 87784972 87786910 CR1-F2 616 - 87784972 87786910 0 2 934,453, 0,1485, -,-, 410518 LINE CR1 1254 chr3 87785908 87786459 CR1-Y2 785 + 87785908 87786459 0 2 65,486, 0,65, +,+, 410520 LINE CR1 1255 chr3 87906053 87906691 CR1-F2 496 + 87906053 87906691 0 2 301,99, 0,539, +,+, 410584 LINE CR1 1256 chr3 87949736 87950338 CR1-L3A_Croc 283 + 87949736 87950338 0 2 178,139, 0,463, +,+, 410616 LINE CR1 1256 chr3 87954793 87955013 CR1-X1 708 - 87954793 87955013 0 2 62,55, 0,165, -,-, 410621 LINE CR1 1256 chr3 88012838 88014066 CR1-X2 585 - 88012838 88014066 0 2 1185,43, 0,1185, -,-, 410661 LINE CR1 1256 chr3 88018671 88019063 CR1-D2 736 - 88018671 88019063 0 2 80,66, 0,326, -,-, 410663 LINE CR1 1257 chr3 88083204 88083500 CR1-D2 573 - 88083204 88083500 0 2 187,109, 0,187, -,-, 410709 LINE CR1 1257 chr3 88088466 88089008 GGLTR8B 489 + 88088466 88089008 0 2 210,332, 0,210, +,+, 410714 LTR ERVL 1257 chr3 88122845 88124378 CR1-H 833 - 88122845 88124378 0 2 363,128, 0,1405, -,-, 410742 LINE CR1 1257 chr3 88199470 88201301 CR1-D2 614 + 88199470 88201301 0 2 863,612, 0,1219, +,+, 410802 LINE CR1 1259 chr3 88380661 88381674 Mariner1_GG 626 - 88380661 88381674 0 2 951,62, 0,951, -,-, 410923 DNA TcMar-Mariner 1261 chr3 88621976 88624240 CR1-H 771 - 88621976 88624240 0 2 128,89, 0,2175, -,-, 411050 LINE CR1 1261 chr3 88639935 88640194 GGLTR8B 469 + 88639935 88640194 0 2 106,72, 0,187, +,+, 411055 LTR ERVL 1261 chr3 88714714 88715800 CR1-H 805 + 88714714 88715800 0 2 728,355, 0,731, +,+, 411092 LINE CR1 1261 chr3 88724679 88725032 CR1-X1 644 + 88724679 88725032 0 2 47,306, 0,47, +,+, 411095 LINE CR1 1262 chr3 88738023 88738278 CR1-D2 749 + 88738023 88738278 0 2 101,154, 0,101, +,+, 411102 LINE CR1 1262 chr3 88747519 88748283 CR1-X1 564 - 88747519 88748283 0 2 192,572, 0,192, -,-, 411108 LINE CR1 1262 chr3 88752036 88753476 CR1-F2 373 + 88752036 88753476 0 3 158,747,514, 0,179,926, +,+,+, 411110 LINE CR1 1262 chr3 88764148 88767778 CR1-F2 492 + 88764148 88767778 0 3 268,141,388, 0,271,3242, +,+,+, 411116 LINE CR1 1262 chr3 88764554 88767397 CR1-H 795 + 88764554 88767397 0 2 1683,230, 0,2613, +,+, 411117 LINE CR1 1262 chr3 88769648 88769937 CR1-Y1_Aves 544 - 88769648 88769937 0 2 79,192, 0,97, -,-, 411120 LINE CR1 1262 chr3 88788227 88788522 CR1-L3A_Croc 460 + 88788227 88788522 0 2 132,55, 0,240, +,+, 411133 LINE CR1 1263 chr3 88889714 88890993 CR1-11_Crp 180 + 88889714 88890993 0 2 310,158, 0,1121, +,+, 411177 LINE CR1 1264 chr3 88998793 88999303 TguLTR5e 263 - 88998793 88999303 0 2 139,273, 0,237, -,-, 411236 LTR ERVL 1264 chr3 89016832 89017087 CR1-D2 626 - 89016832 89017087 0 2 130,125, 0,130, -,-, 411246 LINE CR1 1264 chr3 89054432 89055836 CR1-Y2_Aves 140 - 89054432 89055836 0 2 251,210, 0,1194, -,-, 411269 LINE CR1 1264 chr3 89054713 89055520 GGLTR8A 469 - 89054713 89055520 0 2 318,114, 0,693, -,-, 411270 LTR ERVL 1264 chr3 89060546 89060859 CR1-11_Crp 254 + 89060546 89060859 0 2 180,110, 0,203, +,+, 411278 LINE CR1 1264 chr3 89082775 89083473 GGLTR6 354 - 89082775 89083473 0 2 264,173, 0,525, -,-, 411296 LTR ERVL 1264 chr3 89085942 89087089 CR1-Y4 480 - 89085942 89087089 0 2 487,656, 0,491, -,-, 411301 LINE CR1 1265 chr3 89206422 89207216 CR1-Y2_Aves 140 - 89206422 89207216 0 2 393,181, 0,613, -,-, 411381 LINE CR1 1265 chr3 89221704 89222623 CR1-L3B_Croc 235 - 89221704 89222623 0 2 273,262, 0,657, -,-, 411391 LINE CR1 1265 chr3 89226971 89227236 CR1-Y2 291 + 89226971 89227236 0 2 113,132, 0,133, +,+, 411397 LINE CR1 1265 chr3 89240060 89241705 GGERVL-A-int 191 + 89240060 89241705 0 4 211,268,265,204, 0,668,1018,1441, +,+,+,+, 411415 LTR ERVL 1266 chr3 89300256 89300961 CR1-L3B_Croc 163 + 89300256 89300961 0 2 433,155, 0,550, +,+, 411458 LINE CR1 1266 chr3 89305935 89307648 CR1-E 655 + 89305935 89307648 0 2 837,876, 0,837, +,+, 411463 LINE CR1 1266 chr3 89326322 89327360 CR1-L3B_Croc 18 + 89326322 89327360 0 2 386,363, 0,675, +,+, 411475 LINE CR1 1266 chr3 89344769 89345168 CR1-C4 731 - 89344769 89345168 0 2 94,305, 0,94, -,-, 411484 LINE CR1 1266 chr3 89364755 89365841 CR1-L3B_Croc 262 + 89364755 89365841 0 2 35,151, 0,935, +,+, 411501 LINE CR1 1266 chr3 89377211 89377650 CR1-C 901 + 89377211 89377650 0 2 54,362, 0,77, +,+, 411513 LINE CR1 1267 chr3 89466311 89467133 CR1-Y2_Aves 353 + 89466311 89467133 0 2 271,46, 0,776, +,+, 411571 LINE CR1 1267 chr3 89480981 89481378 CR1-11_Crp 194 + 89480981 89481378 0 2 196,158, 0,239, +,+, 411584 LINE CR1 1267 chr3 89506654 89508369 UCON8 291 - 89506654 89508369 0 2 62,219, 0,1496, -,-, 411603 DNA DNA 1267 chr3 89517556 89518299 X2_LINE 263 + 89517556 89518299 0 2 328,396, 0,347, +,+, 411611 LINE CR1 1268 chr3 89551390 89552257 CR1-C3 507 + 89551390 89552257 0 2 145,312, 0,555, +,+, 411633 LINE CR1 1269 chr3 89663648 89664721 CR1-C3 682 + 89663648 89664721 0 2 88,985, 0,88, +,+, 411712 LINE CR1 1269 chr3 89688552 89689364 Char12Mar1_GG 264 - 89688552 89689364 0 2 339,109, 0,703, -,-, 411734 DNA hAT-Charlie 1269 chr3 89702140 89702929 CR1-F2 548 + 89702140 89702929 0 2 177,250, 0,539, +,+, 411742 LINE CR1 1269 chr3 89780426 89782017 CR1-C2 767 + 89780426 89782017 0 2 169,339, 0,1252, +,+, 411800 LINE CR1 1270 chr3 89818930 89819482 CR1-Y1_Aves 340 + 89818930 89819482 0 2 113,320, 0,232, +,+, 411825 LINE CR1 1270 chr3 89833028 89833617 GGLTR8B 165 + 89833028 89833617 0 2 246,147, 0,442, +,+, 411841 LTR ERVL 1270 chr3 89858765 89859227 CR1-Y 534 + 89858765 89859227 0 2 186,161, 0,301, +,+, 411857 LINE CR1 1270 chr3 89861992 89862435 CR1-Y1_Aves 171 + 89861992 89862435 0 2 54,204, 0,239, +,+, 411860 LINE CR1 1270 chr3 89881062 89882353 CR1-Y2_Aves 116 + 89881062 89882353 0 3 141,725,366, 0,180,925, +,+,+, 411882 LINE CR1 1271 chr3 89977366 89977684 (TTCTC)n 862 + 89977366 89977684 0 2 121,18, 0,300, +,+, 411948 Simple_repeat Simple_repeat 1271 chr3 89997547 89998774 CR1-D2 570 - 89997547 89998774 0 2 386,293, 0,934, -,-, 411964 LINE CR1 1271 chr3 90035065 90038711 CR1-F0 141 - 90035065 90038711 0 4 176,286,473,270, 0,246,2576,3376, -,-,-,-, 411996 LINE CR1 1271 chr3 90035700 90037223 CR1-C3 665 - 90035700 90037223 0 2 550,970, 0,553, -,-, 411998 LINE CR1 158 chr3 90045309 90046893 Mariner1_GG 593 - 90045309 90046893 0 2 417,207, 0,1377, -,-, 412008 DNA TcMar-Mariner 1272 chr3 90063150 90063659 CR1-E 546 + 90063150 90063659 0 2 129,380, 0,129, +,+, 412025 LINE CR1 1272 chr3 90069970 90071504 CR1-D 655 + 90069970 90071504 0 2 816,718, 0,816, +,+, 412034 LINE CR1 1272 chr3 90071607 90071842 CR1-D 684 - 90071607 90071842 0 2 86,149, 0,86, -,-, 412035 LINE CR1 1272 chr3 90107943 90108966 GGLTR4B 632 + 90107943 90108966 0 2 232,118, 0,905, +,+, 412072 LTR ERVL 1272 chr3 90127099 90127552 GGLTR5A 425 - 90127099 90127552 0 2 375,78, 0,375, -,-, 412083 LTR ERVL 1272 chr3 90140771 90145438 ENS1-LTR 965 - 90140771 90145438 0 3 913,2840,913, 0,913,3754, -,-,-, 412094 LTR ERVL 1272 chr3 90174120 90175082 CR1-E 560 - 90174120 90175082 0 2 772,190, 0,772, -,-, 412120 LINE CR1 1273 chr3 90306709 90308001 CR1-Y2_Aves 308 + 90306709 90308001 0 2 788,497, 0,795, +,+, 412240 LINE CR1 1274 chr3 90317468 90320921 Char12Mar1_GG 431 - 90317468 90320921 0 2 312,76, 0,3377, -,-, 412250 DNA hAT-Charlie 1274 chr3 90317807 90320847 CR1-Y 497 + 90317807 90320847 0 2 1394,1422, 0,1618, +,+, 412251 LINE CR1 1274 chr3 90356063 90357126 CR1-D2 622 + 90356063 90357126 0 2 724,52, 0,1011, +,+, 412288 LINE CR1 1274 chr3 90373839 90375849 CR1-H 707 - 90373839 90375849 0 2 82,1400, 0,610, -,-, 412308 LINE CR1 1274 chr3 90401494 90402986 CR1-X2 307 + 90401494 90402986 0 2 193,808, 0,684, +,+, 412336 LINE CR1 1275 chr3 90443232 90443329 (T)n 892 + 90443232 90443329 0 2 22,30, 0,67, +,+, 412370 Simple_repeat Simple_repeat 1275 chr3 90500000 90500691 CR1-F2 505 + 90500000 90500691 0 2 296,261, 0,430, +,+, 412421 LINE CR1 1275 chr3 90521909 90524976 CR1-C2 871 + 90521909 90524976 0 2 35,97, 0,2970, +,+, 412445 LINE CR1 1275 chr3 90526011 90526788 CR1-D 680 - 90526011 90526788 0 2 511,257, 0,520, -,-, 412448 LINE CR1 1276 chr3 90571681 90572771 CR1-X2 471 - 90571681 90572771 0 2 226,282, 0,808, -,-, 412495 LINE CR1 1276 chr3 90618162 90619128 CR1-Y4 543 - 90618162 90619128 0 2 217,176, 0,790, -,-, 412532 LINE CR1 1276 chr3 90644593 90645072 GGLTR5A 270 + 90644593 90645072 0 3 13,12,167, 0,198,312, +,+,+, 412562 LTR ERVL 1277 chr3 90719856 90720908 CR1-E 387 - 90719856 90720908 0 2 573,479, 0,573, -,-, 412647 LINE CR1 1277 chr3 90741646 90742886 CR1-C4 563 - 90741646 90742886 0 2 101,292, 0,948, -,-, 412664 LINE CR1 1277 chr3 90748563 90750571 CR1-Y4 452 - 90748563 90750571 0 2 1006,108, 0,1900, -,-, 412673 LINE CR1 1277 chr3 90767381 90768416 CR1-D2 511 + 90767381 90768416 0 4 50,74,195,453, 0,50,387,582, +,+,+,+, 412690 LINE CR1 1277 chr3 90793961 90796573 CR1-E 660 + 90793961 90796573 0 2 358,486, 0,2126, +,+, 412721 LINE CR1 1277 chr3 90794321 90796085 ENS3-int 430 + 90794321 90796085 0 2 820,940, 0,824, +,+, 412722 LTR ERVL 1277 chr3 90797889 90798269 GGLTR4B 662 - 90797889 90798269 0 2 113,237, 0,143, -,-, 412725 LTR ERVL 1277 chr3 90801701 90806552 CR1-C4 311 - 90801701 90806552 0 2 1033,989, 0,3862, -,-, 412730 LINE CR1 1277 chr3 90820792 90821136 GGLTR5B 338 + 90820792 90821136 0 2 83,173, 0,171, +,+, 412744 LTR ERVL 1278 chr3 90833083 90833868 Mariner1b_GG 584 - 90833083 90833868 0 2 240,192, 0,593, -,-, 412747 DNA TcMar-Mariner 1278 chr3 90849209 90851035 CR1-C2 623 + 90849209 90851035 0 2 1704,108, 0,1718, +,+, 412761 LINE CR1 1278 chr3 90858956 90859598 CR1-X2 489 + 90858956 90859598 0 3 176,415,51, 0,176,591, +,+,+, 412768 LINE CR1 1278 chr3 90868999 90872133 GGLTR8B 194 + 90868999 90872133 0 2 171,401, 0,2733, +,+, 412776 LTR ERVL 1278 chr3 90874046 90876236 CR1-Y2_Aves 289 + 90874046 90876236 0 2 803,817, 0,1373, +,+, 412782 LINE CR1 1278 chr3 90899143 90900349 CR1-C4 556 - 90899143 90900349 0 2 577,627, 0,579, -,-, 412808 LINE CR1 1278 chr3 90905199 90905477 GGLTR5A 477 - 90905199 90905477 0 2 77,163, 0,115, -,-, 412816 LTR ERVL 1278 chr3 90919200 90919835 GGLTR5B 264 + 90919200 90919835 0 3 357,118,91, 0,388,544, +,+,+, 412825 LTR ERVL 1278 chr3 90924453 90925636 Char12Mar1_GG 407 - 90924453 90925636 0 3 374,234,361, 0,547,822, -,-,-, 412834 DNA hAT-Charlie 1278 chr3 90950199 90950673 CR1-Y1_Aves 470 - 90950199 90950673 0 2 182,292, 0,182, -,-, 412855 LINE CR1 1278 chr3 90958526 90963901 CR1-C3 588 - 90958526 90963901 0 3 262,430,1145, 0,1267,4230, -,-,-, 412863 LINE CR1 1279 chr3 90987343 90988027 CR1-Y4 538 - 90987343 90988027 0 2 472,192, 0,492, -,-, 412883 LINE CR1 1279 chr3 90992550 90994510 Charlie12_GG 304 - 90992550 90994510 0 2 1514,423, 0,1537, -,-, 412888 DNA hAT-Charlie 1279 chr3 91004255 91004925 CR1-B2 723 - 91004255 91004925 0 2 70,41, 0,629, -,-, 412896 LINE CR1 1279 chr3 91056337 91057508 CR1-L3B_Croc 304 - 91056337 91057508 0 2 74,123, 0,1048, -,-, 412951 LINE CR1 1279 chr3 91058449 91058712 CR1-Y2_Aves 368 + 91058449 91058712 0 2 110,135, 0,128, +,+, 412955 LINE CR1 1280 chr3 91102241 91103735 CR1-F2 682 - 91102241 91103735 0 2 58,1436, 0,58, -,-, 412991 LINE CR1 1281 chr3 91243151 91243671 TguLTR5d 390 + 91243151 91243671 0 2 369,121, 0,399, +,+, 413082 LTR ERVL 1281 chr3 91288673 91289790 CR1-Y2_Aves 110 - 91288673 91289790 0 2 706,216, 0,901, -,-, 413102 LINE CR1 1282 chr3 91399668 91399715 (TTTTC)n 596 + 91399668 91399715 0 2 14,6, 0,41, +,+, 413168 Simple_repeat Simple_repeat 1282 chr3 91413456 91413887 Mariner1b_GG 628 - 91413456 91413887 0 2 216,215, 0,216, -,-, 413179 DNA TcMar-Mariner 1282 chr3 91461147 91463106 CR1-D 610 - 91461147 91463106 0 2 754,107, 0,1852, -,-, 413208 LINE CR1 1283 chr3 91584450 91584726 Char12Mar1_GG 615 - 91584450 91584726 0 2 58,49, 0,227, -,-, 413289 DNA hAT-Charlie 1283 chr3 91593896 91596742 GGLTR5B 649 + 91593896 91596742 0 3 69,170,124, 0,2452,2722, +,+,+, 413298 LTR ERVL 1284 chr3 91646004 91647057 CR1-C 814 - 91646004 91647057 0 2 378,675, 0,378, -,-, 413336 LINE CR1 1284 chr3 91702166 91703562 CR1-H 863 - 91702166 91703562 0 2 1249,147, 0,1249, -,-, 413371 LINE CR1 1285 chr3 91788191 91788993 CR1-D 612 + 91788191 91788993 0 2 678,99, 0,703, +,+, 413424 LINE CR1 1285 chr3 91859385 91860979 CR1-Y2_Aves 176 + 91859385 91860979 0 3 200,338,331, 0,925,1263, +,+,+, 413466 LINE CR1 1285 chr3 91865934 91867796 CR1-C4 539 - 91865934 91867796 0 3 627,822,72, 0,968,1790, -,-,-, 413471 LINE CR1 1286 chr3 91891215 91891509 CR1-Y 785 - 91891215 91891509 0 2 49,245, 0,49, -,-, 413489 LINE CR1 1286 chr3 91924271 91925112 CR1-C4 553 + 91924271 91925112 0 2 502,339, 0,502, +,+, 413506 LINE CR1 1286 chr3 91981962 91982356 CR1-H 350 + 91981962 91982356 0 2 206,178, 0,216, +,+, 413550 LINE CR1 1286 chr3 92004957 92005425 CR1-Y2_Aves 436 + 92004957 92005425 0 2 294,160, 0,308, +,+, 413565 LINE CR1 1287 chr3 92128834 92129618 CR1-Y4 246 - 92128834 92129618 0 2 301,453, 0,331, -,-, 413635 LINE CR1 160 chr3 92142888 92143919 CR1-F2 490 + 92142888 92143919 0 2 198,833, 0,198, +,+, 413644 LINE CR1 1288 chr3 92188243 92189555 CR1-D2 668 + 92188243 92189555 0 2 603,301, 0,1011, +,+, 413662 LINE CR1 1289 chr3 92290884 92292362 ENS3-int 151 + 92290884 92292362 0 3 220,323,526, 0,597,952, +,+,+, 413723 LTR ERVL 1289 chr3 92366546 92368167 CR1-Y2_Aves 252 - 92366546 92368167 0 2 148,1060, 0,561, -,-, 413787 LINE CR1 1289 chr3 92371854 92372536 TguLTR5e 407 - 92371854 92372536 0 2 105,366, 0,316, -,-, 413791 LTR ERVL 1289 chr3 92379616 92380770 CR1-Y2_Aves 361 + 92379616 92380770 0 2 355,364, 0,790, +,+, 413798 LINE CR1 1289 chr3 92384264 92385125 CR1-Y1_Aves 590 - 92384264 92385125 0 2 77,64, 0,797, -,-, 413804 LINE CR1 1289 chr3 92384431 92385060 CR1-X2 651 + 92384431 92385060 0 2 249,296, 0,333, +,+, 413805 LINE CR1 1290 chr3 92412593 92413077 CR1-D2 538 - 92412593 92413077 0 2 85,399, 0,85, -,-, 413825 LINE CR1 1290 chr3 92413076 92413625 CR1-E 402 - 92413076 92413625 0 2 450,99, 0,450, -,-, 413826 LINE CR1 1290 chr3 92420657 92420979 CR1-Y2 417 + 92420657 92420979 0 2 82,194, 0,128, +,+, 413833 LINE CR1 1290 chr3 92446959 92448464 CR1-G 822 + 92446959 92448464 0 2 96,1408, 0,97, +,+, 413857 LINE CR1 1290 chr3 92488216 92489179 CR1-E 732 - 92488216 92489179 0 2 562,395, 0,568, -,-, 413887 LINE CR1 1291 chr3 92584531 92584594 (AATTAAT)n 442 + 92584531 92584594 0 2 11,20, 0,43, +,+, 413949 Simple_repeat Simple_repeat 1291 chr3 92600947 92601567 CR1-L3B_Croc 173 + 92600947 92601567 0 2 380,240, 0,380, +,+, 413970 LINE CR1 1291 chr3 92631571 92633223 CR1-F 455 + 92631571 92633223 0 2 869,775, 0,877, +,+, 413996 LINE CR1 1291 chr3 92659723 92660157 ENS1B-LTR 608 - 92659723 92660157 0 2 117,232, 0,202, -,-, 414014 LTR ERVL 1292 chr3 92676125 92676945 GGLTR5A 384 + 92676125 92676945 0 2 268,196, 0,624, +,+, 414030 LTR ERVL 1292 chr3 92699025 92700829 CR1-D2 658 + 92699025 92700829 0 2 72,154, 0,1650, +,+, 414059 LINE CR1 1292 chr3 92729799 92730068 GGLTR8A 451 - 92729799 92730068 0 2 98,161, 0,108, -,-, 414092 LTR ERVL 1292 chr3 92781279 92781615 GGLTR5B 412 + 92781279 92781615 0 2 115,218, 0,118, +,+, 414137 LTR ERVL 1293 chr3 92845780 92846984 CR1-X2 611 + 92845780 92846984 0 2 255,137, 0,1067, +,+, 414207 LINE CR1 1294 chr3 92932665 92934101 CR1-F2 642 + 92932665 92934101 0 3 86,272,65, 0,1099,1371, +,+,+, 414284 LINE CR1 1294 chr3 92956764 92957204 GGLTR8B 346 - 92956764 92957204 0 2 278,162, 0,278, -,-, 414299 LTR ERVL 1294 chr3 92965224 92966682 CR1-Y2_Aves 274 + 92965224 92966682 0 2 235,163, 0,1295, +,+, 414305 LINE CR1 1294 chr3 92976819 92977358 CR1-F0 279 + 92976819 92977358 0 2 88,158, 0,381, +,+, 414312 LINE CR1 1295 chr3 93084714 93085358 CR1-C4 513 - 93084714 93085358 0 3 224,156,264, 0,224,380, -,-,-, 414402 LINE CR1 1295 chr3 93087241 93087573 CR1-C 774 + 93087241 93087573 0 2 35,297, 0,35, +,+, 414404 LINE CR1 1295 chr3 93097409 93098725 CR1-C4 507 - 93097409 93098725 0 2 786,530, 0,786, -,-, 414413 LINE CR1 1295 chr3 93147130 93147175 (TTGTTTT)n 516 + 93147130 93147175 0 2 10,7, 0,38, +,+, 414445 Simple_repeat Simple_repeat 1296 chr3 93253346 93254005 CR1-L3A_Croc 425 + 93253346 93254005 0 2 49,244, 0,415, +,+, 414531 LINE CR1 1297 chr3 93326713 93326758 (AACATAA)n 606 + 93326713 93326758 0 2 12,9, 0,36, +,+, 414594 Simple_repeat Simple_repeat 1297 chr3 93362648 93362752 G-rich 178 + 93362648 93362752 0 2 20,20, 0,84, +,+, 414622 Low_complexity Low_complexity 1297 chr3 93402574 93404913 CR1-C4 540 + 93402574 93404913 0 2 1166,1173, 0,1166, +,+, 414647 LINE CR1 1297 chr3 93446101 93446559 CR1-G 808 + 93446101 93446559 0 2 131,295, 0,163, +,+, 414677 LINE CR1 1298 chr3 93477594 93477824 (TCC)n 516 + 93477594 93477824 0 2 54,164, 0,66, +,+, 414698 Simple_repeat Simple_repeat 1298 chr3 93480135 93480579 GGLTR8A 233 + 93480135 93480579 0 2 249,178, 0,266, +,+, 414702 LTR ERVL 1298 chr3 93509827 93510473 CR1-L3B_Croc 109 + 93509827 93510473 0 2 184,264, 0,382, +,+, 414727 LINE CR1 1298 chr3 93550401 93550819 CR1-G 860 - 93550401 93550819 0 2 298,120, 0,298, -,-, 414754 LINE CR1 1299 chr3 93622957 93624460 CR1-D 743 - 93622957 93624460 0 3 335,329,839, 0,335,664, -,-,-, 414810 LINE CR1 1299 chr3 93644076 93644574 GGLTR8B 386 - 93644076 93644574 0 2 140,103, 0,395, -,-, 414830 LTR ERVL 1299 chr3 93685600 93686444 CR1-F2 542 - 93685600 93686444 0 2 93,194, 0,650, -,-, 414861 LINE CR1 1300 chr3 93758447 93758828 GGLTR5B 562 + 93758447 93758828 0 2 140,204, 0,177, +,+, 414922 LTR ERVL 1300 chr3 93796897 93797238 CR1-X1 594 + 93796897 93797238 0 2 131,210, 0,131, +,+, 414946 LINE CR1 1300 chr3 93806254 93807167 Char12Mar1_GG 586 - 93806254 93807167 0 2 308,240, 0,673, -,-, 414949 DNA hAT-Charlie 1300 chr3 93842165 93842235 Chompy-1_Croc 314 - 93842165 93842235 0 2 14,17, 0,53, -,-, 414980 DNA PIF-Harbinger 1301 chr3 93852409 93852993 GGLTR5A 633 - 93852409 93852993 0 4 94,121,87,50, 0,318,447,534, -,-,-,-, 414991 LTR ERVL 1301 chr3 93874568 93875807 Char12Mar1_GG 689 - 93874568 93875807 0 2 316,253, 0,986, -,-, 415001 DNA hAT-Charlie 1301 chr3 93911574 93911760 CR1-X2 537 - 93911574 93911760 0 2 71,112, 0,74, -,-, 415023 LINE CR1 1301 chr3 93919486 93919957 GGLTR8A 677 - 93919486 93919957 0 2 161,290, 0,181, -,-, 415031 LTR ERVL 1302 chr3 93992743 93993141 CR1-Y2_Aves 182 + 93992743 93993141 0 2 169,175, 0,223, +,+, 415077 LINE CR1 1302 chr3 94032933 94033988 CR1-D2 670 - 94032933 94033988 0 2 507,548, 0,507, -,-, 415105 LINE CR1 1302 chr3 94040347 94042559 CR1-D 680 - 94040347 94042559 0 2 573,1300, 0,912, -,-, 415110 LINE CR1 1302 chr3 94073879 94075102 CR1-Y2_Aves 111 + 94073879 94075102 0 3 174,210,344, 0,512,879, +,+,+, 415132 LINE CR1 1302 chr3 94081402 94089864 Char12Mar1_GG 604 - 94081402 94089864 0 2 134,381, 0,8081, -,-, 415139 DNA hAT-Charlie 1303 chr3 94132340 94133527 CR1-Y2_Aves 169 - 94132340 94133527 0 2 356,289, 0,898, -,-, 415181 LINE CR1 1303 chr3 94137081 94137401 CR1-L3B_Croc 240 - 94137081 94137401 0 2 129,152, 0,168, -,-, 415185 LINE CR1 1303 chr3 94147223 94148079 CR1-E 684 - 94147223 94148079 0 2 744,112, 0,744, -,-, 415191 LINE CR1 1303 chr3 94163089 94163961 CR1-F2 500 + 94163089 94163961 0 2 653,219, 0,653, +,+, 415202 LINE CR1 1303 chr3 94194895 94195218 GGLTR5A 342 + 94194895 94195218 0 2 181,127, 0,196, +,+, 415232 LTR ERVL 1303 chr3 94195340 94196763 CR1-Y3 213 - 94195340 94196763 0 2 161,108, 0,1315, -,-, 415233 LINE CR1 1303 chr3 94197557 94198231 CR1-Y 460 + 94197557 94198231 0 2 215,112, 0,562, +,+, 415236 LINE CR1 1304 chr3 94314096 94315277 CR1-F 265 + 94314096 94315277 0 2 837,317, 0,864, +,+, 415321 LINE CR1 1304 chr3 94316130 94316776 CR1-Y2_Aves 297 + 94316130 94316776 0 2 473,173, 0,473, +,+, 415324 LINE CR1 1305 chr3 94379831 94380099 CR1-C4 544 - 94379831 94380099 0 2 128,140, 0,128, -,-, 415376 LINE CR1 1305 chr3 94413157 94413588 GGLTR8A 593 - 94413157 94413588 0 2 75,352, 0,79, -,-, 415406 LTR ERVL 1305 chr3 94441894 94442277 CR1-C4 587 - 94441894 94442277 0 2 103,280, 0,103, -,-, 415439 LINE CR1 1305 chr3 94451620 94451679 (TTTC)n 494 + 94451620 94451679 0 2 16,6, 0,53, +,+, 415446 Simple_repeat Simple_repeat 1305 chr3 94464560 94465599 CR1-C4 593 - 94464560 94465599 0 2 664,374, 0,665, -,-, 415460 LINE CR1 1305 chr3 94483603 94484338 CR1-X2 138 + 94483603 94484338 0 2 207,485, 0,250, +,+, 415474 LINE CR1 1305 chr3 94491541 94492004 GGLTR5A 450 + 94491541 94492004 0 2 307,107, 0,356, +,+, 415479 LTR ERVL 1305 chr3 94499131 94499999 CR1-Y2 774 - 94499131 94499999 0 2 354,302, 0,566, -,-, 415485 LINE CR1 1306 chr3 94578684 94579542 CR1-X2 576 + 94578684 94579542 0 2 245,613, 0,245, +,+, 415556 LINE CR1 1306 chr3 94606835 94607613 GGLTR8B 329 - 94606835 94607613 0 4 57,162,117,269, 0,164,363,509, -,-,-,-, 415583 LTR ERVL 163 chr3 94631913 94634948 CR1-G 832 - 94631913 94634948 0 2 1610,241, 0,2794, -,-, 415612 LINE CR1 1307 chr3 94639493 94639915 Char12Mar1_GG 563 - 94639493 94639915 0 2 191,231, 0,191, -,-, 415617 DNA hAT-Charlie 1307 chr3 94641849 94642877 CR1-L3A_Croc 77 - 94641849 94642877 0 2 165,368, 0,660, -,-, 415618 LINE CR1 1308 chr3 94830373 94839440 Char12Mar1_GG 713 - 94830373 94839440 0 2 105,299, 0,8768, -,-, 415779 DNA hAT-Charlie 1308 chr3 94868130 94868198 (T)n 952 + 94868130 94868198 0 2 23,22, 0,46, +,+, 415812 Simple_repeat Simple_repeat 1308 chr3 94883147 94883433 X2_LINE 482 + 94883147 94883433 0 2 102,137, 0,149, +,+, 415829 LINE CR1 1310 chr3 95065645 95065760 (T)n 968 + 95065645 95065760 0 2 27,32, 0,83, +,+, 415975 Simple_repeat Simple_repeat 1310 chr3 95110534 95110916 CR1-Y4 500 - 95110534 95110916 0 2 108,274, 0,108, -,-, 416021 LINE CR1 1311 chr3 95165952 95166990 CR1-Y3 749 + 95165952 95166990 0 2 300,119, 0,919, +,+, 416054 LINE CR1 1311 chr3 95202792 95203892 CR1-H 777 + 95202792 95203892 0 2 261,839, 0,261, +,+, 416085 LINE CR1 1311 chr3 95229337 95232135 CR1-H 822 + 95229337 95232135 0 2 578,1002, 0,1796, +,+, 416112 LINE CR1 1311 chr3 95245497 95246530 CR1-Y2_Aves 353 - 95245497 95246530 0 2 530,217, 0,816, -,-, 416120 LINE CR1 1312 chr3 95316084 95317161 CR1-D2 658 + 95316084 95317161 0 2 704,373, 0,704, +,+, 416188 LINE CR1 1312 chr3 95323529 95324448 CR1-C4 451 + 95323529 95324448 0 2 512,193, 0,726, +,+, 416194 LINE CR1 1312 chr3 95329813 95329884 (TGTTTAC)n 338 + 95329813 95329884 0 2 18,17, 0,54, +,+, 416199 Simple_repeat Simple_repeat 1312 chr3 95398612 95399536 CR1-X2 277 + 95398612 95399536 0 2 67,140, 0,784, +,+, 416254 LINE CR1 1313 chr3 95451758 95451912 GGLTR3A 811 . 95451758 95451912 0 2 97,57, 0,97, +,-, 416295 LTR ERVL 1313 chr3 95537399 95537746 CR1-F2 545 - 95537399 95537746 0 2 235,112, 0,235, -,-, 416355 LINE CR1 1314 chr3 95663391 95664817 GGLTR12C 590 - 95663391 95664817 0 2 375,355, 0,1071, -,-, 416443 LTR ERVL 1314 chr3 95673513 95673845 GGERV10_LTR 652 + 95673513 95673845 0 2 64,160, 0,172, +,+, 416452 LTR ERVL 164 chr3 95682121 95688631 GGXHOI 465 - 95682121 95688631 0 9 57,208,702,1019,1082,665,242,893,1428, 0,73,340,1059,2119,3222,3908,4171,5082, -,-,-,-,-,-,-,-,-, 416457 Satellite W-chromosome 1315 chr3 95796983 95798229 CR1-11_Crp 122 + 95796983 95798229 0 2 769,196, 0,1050, +,+, 416541 LINE CR1 1316 chr3 95852411 95852808 CR1-D2 533 + 95852411 95852808 0 2 303,94, 0,303, +,+, 416583 LINE CR1 1316 chr3 95874057 95874773 CR1-Y1_Aves 413 - 95874057 95874773 0 2 569,147, 0,569, -,-, 416606 LINE CR1 1316 chr3 95890195 95891455 CR1-C3 697 + 95890195 95891455 0 3 235,662,345, 0,253,915, +,+,+, 416620 LINE CR1 1316 chr3 95931303 95931533 (TCTT)n 286 + 95931303 95931533 0 2 142,50, 0,180, +,+, 416650 Simple_repeat Simple_repeat 1316 chr3 95934524 95935292 CR1-Y1_Aves 93 - 95934524 95935292 0 2 261,418, 0,350, -,-, 416652 LINE CR1 1317 chr3 95967288 95967760 CR1-X1 630 - 95967288 95967760 0 2 67,405, 0,67, -,-, 416681 LINE CR1 1318 chr3 96076114 96090870 Char12Mar1_GG 647 - 96076114 96090870 0 2 560,43, 0,14713, -,-, 416745 DNA hAT-Charlie 1318 chr3 96126642 96127015 CR1-Y1_Aves 423 - 96126642 96127015 0 2 179,106, 0,267, -,-, 416777 LINE CR1 1318 chr3 96148715 96148996 CR1-E 693 + 96148715 96148996 0 2 99,47, 0,234, +,+, 416788 LINE CR1 1318 chr3 96158421 96158797 CR1-D2 647 - 96158421 96158797 0 2 213,163, 0,213, -,-, 416793 LINE CR1 1319 chr3 96221664 96223208 UCON8 247 - 96221664 96223208 0 2 174,206, 0,1338, -,-, 416830 DNA DNA 1319 chr3 96281360 96282125 CR1-F2 559 + 96281360 96282125 0 2 118,647, 0,118, +,+, 416879 LINE CR1 1320 chr3 96379760 96385576 GGLTR3F1 899 + 96379760 96385576 0 2 494,5320, 0,496, +,+, 416915 LTR ERVL 1320 chr3 96385576 96386106 GGLTR3F1 936 + 96385576 96386106 0 2 36,494, 0,36, +,+, 416916 LTR ERVL 1320 chr3 96417349 96419194 CR1-F2 488 + 96417349 96419194 0 2 1357,312, 0,1533, +,+, 416931 LINE CR1 1321 chr3 96543559 96544901 CR1-E 388 + 96543559 96544901 0 2 754,525, 0,817, +,+, 416989 LINE CR1 1322 chr3 96652664 96653710 CR1-C4 517 + 96652664 96653710 0 2 93,208, 0,838, +,+, 417035 LINE CR1 1322 chr3 96655951 96656684 GGLTR8A 599 + 96655951 96656684 0 2 47,686, 0,47, +,+, 417038 LTR ERVL 1322 chr3 96691766 96693469 CR1-X 251 + 96691766 96693469 0 3 242,418,566, 0,276,1137, +,+,+, 417052 LINE CR1 1323 chr3 96746581 96746948 CR1-Y1_Aves 469 - 96746581 96746948 0 2 240,119, 0,248, -,-, 417093 LINE CR1 1323 chr3 96832648 96833851 CR1-Y4 494 - 96832648 96833851 0 2 168,1032, 0,171, -,-, 417152 LINE CR1 1323 chr3 96842724 96854917 Mariner1_GG 658 - 96842724 96854917 0 2 128,223, 0,11970, -,-, 417160 DNA TcMar-Mariner 1324 chr3 96962574 96962746 Char12Mar1_GG 816 - 96962574 96962746 0 2 78,29, 0,143, -,-, 417218 DNA hAT-Charlie 1325 chr3 97041858 97044816 CR1-B 877 - 97041858 97044816 0 2 369,2589, 0,369, -,-, 417261 LINE CR1 1326 chr3 97133405 97134725 CR1-F2 624 - 97133405 97134725 0 2 134,1175, 0,145, -,-, 417316 LINE CR1 1326 chr3 97196775 97197093 CR1-Y1_Aves 469 + 97196775 97197093 0 2 131,104, 0,214, +,+, 417357 LINE CR1 1326 chr3 97206609 97206979 CR1-C 772 + 97206609 97206979 0 2 68,299, 0,71, +,+, 417370 LINE CR1 1326 chr3 97220757 97222064 CR1-E 754 + 97220757 97222064 0 2 343,938, 0,369, +,+, 417373 LINE CR1 1326 chr3 97225139 97225589 CR1-Y1_Aves 478 - 97225139 97225589 0 2 264,164, 0,286, -,-, 417377 LINE CR1 1326 chr3 97230038 97230228 CR1-Y4 589 - 97230038 97230228 0 2 138,52, 0,138, -,-, 417379 LINE CR1 1327 chr3 97370363 97373319 GGERV28_LTR 854 + 97370363 97373319 0 2 477,2479, 0,477, +,+, 417463 LTR ERVK 1327 chr3 97382886 97383763 CR1-Y4 379 + 97382886 97383763 0 2 423,112, 0,765, +,+, 417469 LINE CR1 1328 chr3 97407311 97407416 CR1-C2 814 + 97407311 97407416 0 2 71,34, 0,71, +,+, 417483 LINE CR1 1328 chr3 97408339 97408810 CR1-C4 626 - 97408339 97408810 0 2 339,132, 0,339, -,-, 417484 LINE CR1 1328 chr3 97461805 97462373 CR1-F2 412 + 97461805 97462373 0 2 245,252, 0,316, +,+, 417516 LINE CR1 1328 chr3 97478379 97479176 GGLTR8A 422 - 97478379 97479176 0 2 104,297, 0,500, -,-, 417532 LTR ERVL 1328 chr3 97491842 97495416 CR1-H 690 - 97491842 97495416 0 2 69,44, 0,3530, -,-, 417543 LINE CR1 1329 chr3 97528968 97529294 TguLTR5e 294 + 97528968 97529294 0 2 208,115, 0,211, +,+, 417571 LTR ERVL 1329 chr3 97565728 97565794 A-rich 398 + 97565728 97565794 0 2 20,21, 0,45, +,+, 417596 Low_complexity Low_complexity 1329 chr3 97604815 97605164 CR1-F2 617 - 97604815 97605164 0 2 309,35, 0,314, -,-, 417613 LINE CR1 1330 chr3 97671753 97673803 CR1-Y2_Aves 184 + 97671753 97673803 0 3 1138,409,193, 0,1382,1857, +,+,+, 417661 LINE CR1 1330 chr3 97693649 97694137 CR1-Y2_Aves 142 + 97693649 97694137 0 2 251,182, 0,306, +,+, 417677 LINE CR1 1330 chr3 97707616 97707925 CR1-D2 470 + 97707616 97707925 0 2 194,103, 0,206, +,+, 417683 LINE CR1 1331 chr3 97792022 97796573 CR1-C2 492 - 97792022 97796573 0 2 141,257, 0,4294, -,-, 417745 LINE CR1 1331 chr3 97795706 97796373 CR1-Y4 698 + 97795706 97796373 0 2 605,62, 0,605, +,+, 417749 LINE CR1 1331 chr3 97838330 97841714 GGLTR10B 940 - 97838330 97841714 0 3 382,2615,382, 0,385,3002, -,-,-, 417767 LTR ERVK 1332 chr3 97991356 97991976 CR1-Y2_Aves 217 + 97991356 97991976 0 2 87,222, 0,398, +,+, 417850 LINE CR1 1332 chr3 98018602 98019425 CR1-Y1_Aves 495 - 98018602 98019425 0 2 170,179, 0,644, -,-, 417863 LINE CR1 1332 chr3 98018772 98019246 GGLTR8B 588 - 98018772 98019246 0 2 176,298, 0,176, -,-, 417864 LTR ERVL 1334 chr3 98204283 98205111 CR1-C4 549 + 98204283 98205111 0 2 588,240, 0,588, +,+, 418006 LINE CR1 1334 chr3 98217195 98217335 A-rich 590 + 98217195 98217335 0 2 37,12, 0,128, +,+, 418017 Low_complexity Low_complexity 1334 chr3 98289395 98290677 CR1-D 506 + 98289395 98290677 0 2 904,378, 0,904, +,+, 418080 LINE CR1 1335 chr3 98306252 98307894 CR1-L3A_Croc 232 + 98306252 98307894 0 3 416,350,604, 0,445,1038, +,+,+, 418091 LINE CR1 1335 chr3 98428110 98428631 CR1-Y4 604 - 98428110 98428631 0 2 143,376, 0,145, -,-, 418181 LINE CR1 1336 chr3 98491858 98492837 CR1-Y1_Aves 178 - 98491858 98492837 0 2 318,329, 0,650, -,-, 418232 LINE CR1 1336 chr3 98497741 98498740 CR1-Y1_Aves 571 + 98497741 98498740 0 2 121,43, 0,956, +,+, 418244 LINE CR1 1336 chr3 98497852 98498704 CR1-Y 645 + 98497852 98498704 0 2 143,199, 0,653, +,+, 418245 LINE CR1 1336 chr3 98504374 98508015 CR1-B2 735 - 98504374 98508015 0 2 818,345, 0,3296, -,-, 418250 LINE CR1 1336 chr3 98517783 98517850 (TTTT)n 370 + 98517783 98517850 0 2 38,10, 0,57, +,+, 418256 Simple_repeat Simple_repeat 1336 chr3 98539247 98541116 CR1-C 830 - 98539247 98541116 0 2 1827,16, 0,1853, -,-, 418276 LINE CR1 1337 chr3 98596260 98596898 CR1-D2 423 + 98596260 98596898 0 2 296,337, 0,301, +,+, 418328 LINE CR1 1337 chr3 98598279 98599076 CR1-C3 645 + 98598279 98599076 0 2 495,300, 0,497, +,+, 418330 LINE CR1 1337 chr3 98661954 98662840 CR1-D2 567 + 98661954 98662840 0 2 740,125, 0,761, +,+, 418396 LINE CR1 1337 chr3 98680349 98682140 GGLTR3A 543 + 98680349 98682140 0 3 245,194,107, 0,1439,1684, +,+,+, 418415 LTR ERVL 1338 chr3 98728286 98728870 CR1-Y1_Aves 492 - 98728286 98728870 0 2 137,166, 0,418, -,-, 418460 LINE CR1 1338 chr3 98728423 98728689 CR1-Y4 613 - 98728423 98728689 0 2 64,202, 0,64, -,-, 418461 LINE CR1 1338 chr3 98728870 98729578 GGLTR12C 330 - 98728870 98729578 0 2 213,120, 0,588, -,-, 418462 LTR ERVL 1338 chr3 98751819 98757541 Char12Mar1_GG 622 - 98751819 98757541 0 2 180,152, 0,5570, -,-, 418490 DNA hAT-Charlie 1338 chr3 98763963 98764713 CR1-Y2_Aves 144 + 98763963 98764713 0 2 119,510, 0,240, +,+, 418506 LINE CR1 1338 chr3 98781151 98782073 CR1-L3B_Croc 105 + 98781151 98782073 0 2 408,404, 0,518, +,+, 418525 LINE CR1 1338 chr3 98787622 98789432 CR1-X2 227 - 98787622 98789432 0 3 601,257,203, 0,1214,1607, -,-,-, 418534 LINE CR1 1338 chr3 98792318 98793522 CR1-D2 567 - 98792318 98793522 0 2 691,255, 0,949, -,-, 418541 LINE CR1 1338 chr3 98816243 98817263 CR1-Y 347 + 98816243 98817263 0 2 221,312, 0,708, +,+, 418568 LINE CR1 1339 chr3 98860791 98860840 (AACAA)n 570 + 98860791 98860840 0 2 6,16, 0,33, +,+, 418615 Simple_repeat Simple_repeat 1339 chr3 98870523 98871694 X13_LINE 214 + 98870523 98871694 0 2 200,229, 0,942, +,+, 418622 LINE L2 1339 chr3 98871992 98872416 CR1-Y4 346 + 98871992 98872416 0 2 20,320, 0,104, +,+, 418625 LINE CR1 1339 chr3 98894445 98896513 GGERVL-A-int 743 - 98894445 98896513 0 4 310,843,418,497, 0,310,1153,1571, -,-,-,-, 418653 LTR ERVL 1339 chr3 98920706 98924107 CR1-D 519 + 98920706 98924107 0 2 790,79, 0,3322, +,+, 418687 LINE CR1 1339 chr3 98950480 98951443 CR1-Y2_Aves 95 + 98950480 98951443 0 2 462,489, 0,474, +,+, 418718 LINE CR1 167 chr3 98959048 98960109 REP131 236 - 98959048 98960109 0 2 665,243, 0,818, -,-, 418726 DNA? DNA? 1340 chr3 98970193 98971886 CR1-Y4 530 + 98970193 98971886 0 2 580,1088, 0,605, +,+, 418736 LINE CR1 1340 chr3 98974810 98976090 CR1-E 754 - 98974810 98976090 0 2 165,259, 0,1021, -,-, 418737 LINE CR1 1340 chr3 98980135 98982221 CR1-E 640 - 98980135 98982221 0 2 716,648, 0,1438, -,-, 418741 LINE CR1 1340 chr3 98980859 98981574 CR1-G 823 + 98980859 98981574 0 2 198,517, 0,198, +,+, 418742 LINE CR1 1340 chr3 98988244 98988447 REP131 166 + 98988244 98988447 0 2 78,90, 0,113, +,+, 418750 DNA? DNA? 1340 chr3 99016451 99016860 CR1-X1 373 + 99016451 99016860 0 2 287,63, 0,346, +,+, 418772 LINE CR1 1340 chr3 99062402 99064592 CR1-E 743 - 99062402 99064592 0 2 306,112, 0,2078, -,-, 418808 LINE CR1 167 chr3 99088099 99092691 CR1-D2 633 + 99088099 99092691 0 2 780,468, 0,4124, +,+, 418829 LINE CR1 1341 chr3 99170124 99170600 GGLTR3F2 840 + 99170124 99170600 0 2 231,201, 0,275, +,+, 418902 LTR ERVL 1342 chr3 99233437 99234156 CR1-C4 576 + 99233437 99234156 0 2 427,292, 0,427, +,+, 418957 LINE CR1 1342 chr3 99311692 99312620 CR1-Y2_Aves 160 + 99311692 99312620 0 2 353,83, 0,845, +,+, 419024 LINE CR1 1343 chr3 99415377 99418493 Mariner1_GG 552 - 99415377 99418493 0 2 222,1074, 0,2042, -,-, 419100 DNA TcMar-Mariner 1343 chr3 99415596 99417271 CR1-D 792 - 99415596 99417271 0 2 654,57, 0,1618, -,-, 419101 LINE CR1 1343 chr3 99416250 99417430 CR1-B 550 - 99416250 99417430 0 2 219,155, 0,1025, -,-, 419102 LINE CR1 1343 chr3 99424862 99426132 CR1-L3A_Croc 191 - 99424862 99426132 0 2 294,616, 0,654, -,-, 419109 LINE CR1 1343 chr3 99445017 99445877 CR1-Y4 265 - 99445017 99445877 0 2 645,163, 0,697, -,-, 419127 LINE CR1 1344 chr3 99499144 99499668 CR1-11_Crp 219 + 99499144 99499668 0 2 197,119, 0,405, +,+, 419168 LINE CR1 1344 chr3 99503889 99505169 CR1-F 329 + 99503889 99505169 0 2 90,958, 0,322, +,+, 419174 LINE CR1 1344 chr3 99551167 99552716 Char12Mar1_GG 572 - 99551167 99552716 0 2 518,53, 0,1496, -,-, 419203 DNA hAT-Charlie 1345 chr3 99663487 99663556 (T)n 902 + 99663487 99663556 0 2 21,22, 0,47, +,+, 419270 Simple_repeat Simple_repeat 1345 chr3 99670889 99670942 (TTTAA)n 458 + 99670889 99670942 0 2 8,9, 0,44, +,+, 419280 Simple_repeat Simple_repeat 1346 chr3 99762346 99762622 Char12Mar1_GG 615 - 99762346 99762622 0 2 161,114, 0,162, -,-, 419355 DNA hAT-Charlie 1347 chr3 99895609 99896815 CR1-C4 567 + 99895609 99896815 0 2 441,765, 0,441, +,+, 419449 LINE CR1 1347 chr3 99901198 99903288 CR1-H2 850 + 99901198 99903288 0 2 1465,625, 0,1465, +,+, 419451 LINE CR1 1347 chr3 99938443 99938869 SSU-rRNA_Hsa 336 + 99938443 99938869 0 2 232,126, 0,300, +,+, 419488 rRNA rRNA 1347 chr3 99989370 99990242 CR1-L3B_Croc 182 - 99989370 99990242 0 2 81,791, 0,81, -,-, 419526 LINE CR1 1348 chr3 100020147 100021503 CR1-Y2_Aves 281 + 100020147 100021503 0 3 136,1070,126, 0,160,1230, +,+,+, 419555 LINE CR1 1348 chr3 100110306 100110712 CR1-Y1_Aves 468 + 100110306 100110712 0 2 195,195, 0,211, +,+, 419615 LINE CR1 1349 chr3 100158414 100159253 CR1-Y4 586 - 100158414 100159253 0 2 82,187, 0,652, -,-, 419657 LINE CR1 1349 chr3 100162363 100163659 CR1-Y3 576 - 100162363 100163659 0 3 189,979,124, 0,192,1172, -,-,-, 419660 LINE CR1 1349 chr3 100203547 100203858 Char12Mar1_GG 621 - 100203547 100203858 0 2 116,195, 0,116, -,-, 419705 DNA hAT-Charlie 1349 chr3 100230265 100231581 GGLTR5A 425 + 100230265 100231581 0 2 282,149, 0,1167, +,+, 419727 LTR ERVL 1350 chr3 100270117 100270196 (TCTTGT)n 458 + 100270117 100270196 0 2 41,6, 0,73, +,+, 419770 Simple_repeat Simple_repeat 1350 chr3 100283535 100284139 CR1-Y1_Aves 232 - 100283535 100284139 0 2 136,388, 0,216, -,-, 419783 LINE CR1 1350 chr3 100392419 100392690 CR1-Y4 625 + 100392419 100392690 0 2 192,79, 0,192, +,+, 419865 LINE CR1 168 chr3 100400833 100403226 CR1-D 722 - 100400833 100403226 0 2 140,2253, 0,140, -,-, 419869 LINE CR1 1351 chr3 100405866 100408315 CR1-Y 392 - 100405866 100408315 0 2 202,832, 0,1617, -,-, 419873 LINE CR1 1351 chr3 100417427 100418704 CR1-F 871 - 100417427 100418704 0 2 158,1119, 0,158, -,-, 419879 LINE CR1 1351 chr3 100419034 100422591 CR1-D2 676 - 100419034 100422591 0 2 184,2711, 0,846, -,-, 419880 LINE CR1 1351 chr3 100461991 100468140 CR1-C 566 - 100461991 100468140 0 5 93,189,137,137,350, 0,93,1450,4408,5799, -,-,-,-,-, 419908 LINE CR1 1351 chr3 100471651 100474316 CR1-C2 570 - 100471651 100474316 0 2 2408,257, 0,2408, -,-, 419912 LINE CR1 1351 chr3 100474892 100477342 CR1-Y 388 + 100474892 100477342 0 2 832,202, 0,2248, +,+, 419914 LINE CR1 1351 chr3 100516264 100516323 (CGAGAGG)n 410 + 100516264 100516323 0 2 9,15, 0,44, +,+, 419951 Simple_repeat Simple_repeat 1351 chr3 100521411 100521457 (GTTTTG)n 430 + 100521411 100521457 0 2 13,11, 0,35, +,+, 419956 Simple_repeat Simple_repeat 1352 chr3 100604749 100605195 GGLTR8B 522 - 100604749 100605195 0 2 210,144, 0,302, -,-, 420002 LTR ERVL 1352 chr3 100641368 100642083 Mariner1_GG 607 - 100641368 100642083 0 2 635,61, 0,654, -,-, 420026 DNA TcMar-Mariner 1352 chr3 100657244 100657885 CR1-Y2_Aves 226 - 100657244 100657885 0 2 223,143, 0,498, -,-, 420032 LINE CR1 1353 chr3 100725755 100726911 CR1-F2 397 + 100725755 100726911 0 2 168,114, 0,1042, +,+, 420088 LINE CR1 1354 chr3 100800329 100801452 CR1-D 667 + 100800329 100801452 0 3 372,58,435, 0,630,688, +,+,+, 420135 LINE CR1 1354 chr3 100892233 100892680 Mariner1b_GG 646 - 100892233 100892680 0 2 349,68, 0,379, -,-, 420221 DNA TcMar-Mariner 1354 chr3 100905646 100905733 (T)n 901 + 100905646 100905733 0 2 24,19, 0,68, +,+, 420230 Simple_repeat Simple_repeat 1355 chr3 100981451 100982599 CR1-D2 605 + 100981451 100982599 0 3 78,317,728, 0,103,420, +,+,+, 420286 LINE CR1 1355 chr3 100994444 100995860 CR1-C3 695 + 100994444 100995860 0 2 138,700, 0,716, +,+, 420302 LINE CR1 1355 chr3 101050525 101053318 CR1-F2 550 + 101050525 101053318 0 2 141,466, 0,2327, +,+, 420342 LINE CR1 1356 chr3 101104651 101104688 (TCTTT)n 574 + 101104651 101104688 0 2 7,8, 0,29, +,+, 420392 Simple_repeat Simple_repeat 1356 chr3 101118678 101120326 CR1-L3B_Croc 130 - 101118678 101120326 0 2 386,869, 0,779, -,-, 420403 LINE CR1 1356 chr3 101146567 101146659 (ATAT)n 294 + 101146567 101146659 0 2 24,19, 0,73, +,+, 420428 Simple_repeat Simple_repeat 1357 chr3 101196758 101197619 CR1-Y1_Aves 427 - 101196758 101197619 0 2 253,215, 0,646, -,-, 420472 LINE CR1 1357 chr3 101236527 101239935 CR1-B2 264 + 101236527 101239935 0 2 276,174, 0,3234, +,+, 420516 LINE CR1 1357 chr3 101248486 101249465 CR1-C3 622 - 101248486 101249465 0 2 789,190, 0,789, -,-, 420530 LINE CR1 1357 chr3 101265297 101267809 CR1-C4 320 + 101265297 101267809 0 2 258,494, 0,2018, +,+, 420542 LINE CR1 1357 chr3 101265622 101267297 CR1-F2 527 - 101265622 101267297 0 2 154,1111, 0,564, -,-, 420544 LINE CR1 169 chr3 101317087 101319177 GGLTR9 501 - 101317087 101319177 0 3 180,117,33, 0,862,2057, -,-,-, 420574 LTR ERVL 1357 chr3 101317267 101317949 ENS1B-LTR 442 + 101317267 101317949 0 2 320,295, 0,387, +,+, 420575 LTR ERVL 1358 chr3 101322522 101324138 CR1-F2 872 - 101322522 101324138 0 2 32,1584, 0,32, -,-, 420578 LINE CR1 1358 chr3 101365416 101365809 CR1-Y2_Aves 279 + 101365416 101365809 0 2 103,87, 0,306, +,+, 420609 LINE CR1 1358 chr3 101374807 101377339 CR1-C4 509 + 101374807 101377339 0 2 482,1544, 0,988, +,+, 420619 LINE CR1 1358 chr3 101386597 101387940 CR1-Y4 297 + 101386597 101387940 0 2 1218,124, 0,1219, +,+, 420624 LINE CR1 1358 chr3 101400836 101401502 GGLTR5A 560 + 101400836 101401502 0 2 334,237, 0,429, +,+, 420634 LTR ERVL 1358 chr3 101421785 101422649 CR1-E 370 + 101421785 101422649 0 2 303,561, 0,303, +,+, 420651 LINE CR1 1358 chr3 101430416 101432295 CR1-X 275 - 101430416 101432295 0 2 1459,264, 0,1615, -,-, 420662 LINE CR1 1359 chr3 101507382 101507687 CR1-L3A_Croc 225 - 101507382 101507687 0 2 110,120, 0,185, -,-, 420722 LINE CR1 1359 chr3 101509967 101510788 Char12Mar1_GG 581 - 101509967 101510788 0 2 131,370, 0,451, -,-, 420726 DNA hAT-Charlie 1359 chr3 101540430 101540592 (TTTACT)n 292 + 101540430 101540592 0 2 9,13, 0,149, +,+, 420746 Simple_repeat Simple_repeat 1360 chr3 101585668 101586032 (GGAA)n 916 + 101585668 101586032 0 2 107,77, 0,287, +,+, 420785 Simple_repeat Simple_repeat 1360 chr3 101634372 101634474 (CTTTT)n 404 + 101634372 101634474 0 2 12,21, 0,81, +,+, 420819 Simple_repeat Simple_repeat 1361 chr3 101719674 101720152 CR1-11_Crp 168 + 101719674 101720152 0 2 120,203, 0,275, +,+, 420880 LINE CR1 1361 chr3 101728278 101730134 CR1-L3B_Croc 157 - 101728278 101730134 0 3 316,322,862, 0,428,994, -,-,-, 420886 LINE CR1 1361 chr3 101748784 101750920 CR1-L3B_Croc 194 + 101748784 101750920 0 3 340,933,145, 0,656,1991, +,+,+, 420902 LINE CR1 1361 chr3 101768343 101768742 CR1-D2 634 - 101768343 101768742 0 2 193,172, 0,227, -,-, 420909 LINE CR1 1362 chr3 101857664 101858586 CR1-D 555 - 101857664 101858586 0 3 321,480,96, 0,321,826, -,-,-, 420959 LINE CR1 1362 chr3 101864223 101864310 GA-rich 174 + 101864223 101864310 0 2 32,34, 0,53, +,+, 420966 Low_complexity Low_complexity 1362 chr3 101964868 101965242 CR1-11_Crp 489 - 101964868 101965242 0 2 225,46, 0,328, -,-, 421031 LINE CR1 1363 chr3 101988142 101988991 GGLTR9 522 - 101988142 101988991 0 2 50,260, 0,589, -,-, 421054 LTR ERVL 1363 chr3 101991544 101993277 CR1-C3 742 - 101991544 101993277 0 2 153,1573, 0,160, -,-, 421058 LINE CR1 1363 chr3 102053400 102056433 REP131 185 - 102053400 102056433 0 2 114,258, 0,2775, -,-, 421089 DNA? DNA? 1364 chr3 102178119 102181535 GGLTR10C2 866 - 102178119 102181535 0 3 359,2696,361, 0,359,3055, -,-,-, 421182 LTR ERVK 1364 chr3 102216851 102217857 Char12Mar1_GG 611 - 102216851 102217857 0 2 633,373, 0,633, -,-, 421212 DNA hAT-Charlie 1364 chr3 102218553 102218646 (T)n 705 + 102218553 102218646 0 2 19,45, 0,48, +,+, 421214 Simple_repeat Simple_repeat 1364 chr3 102230556 102233060 CR1-D2 659 - 102230556 102233060 0 2 260,227, 0,2277, -,-, 421223 LINE CR1 1366 chr3 102414567 102416577 CR1-Y4 658 + 102414567 102416577 0 2 1803,199, 0,1811, +,+, 421341 LINE CR1 1366 chr3 102421807 102422683 CR1-F2 661 - 102421807 102422683 0 2 475,380, 0,496, -,-, 421345 LINE CR1 1366 chr3 102461542 102462168 CR1-C 883 - 102461542 102462168 0 2 287,339, 0,287, -,-, 421370 LINE CR1 1366 chr3 102486875 102488200 CR1-Y2_Aves 175 + 102486875 102488200 0 2 405,355, 0,970, +,+, 421385 LINE CR1 1367 chr3 102504489 102505086 CR1-Y2_Aves 466 - 102504489 102505086 0 2 332,264, 0,333, -,-, 421403 LINE CR1 1367 chr3 102536291 102536535 CR1-11_Crp 623 + 102536291 102536535 0 2 57,48, 0,196, +,+, 421420 LINE CR1 1367 chr3 102567059 102568245 CR1-C4 678 + 102567059 102568245 0 2 114,502, 0,684, +,+, 421444 LINE CR1 1367 chr3 102596379 102596830 CR1-L3A_Croc 247 + 102596379 102596830 0 2 165,178, 0,273, +,+, 421470 LINE CR1 1368 chr3 102632795 102633692 Char12Mar1_GG 715 - 102632795 102633692 0 2 65,501, 0,396, -,-, 421499 DNA hAT-Charlie 1369 chr3 102778471 102779112 GGLTR5B 371 + 102778471 102779112 0 2 387,190, 0,451, +,+, 421600 LTR ERVL 1369 chr3 102795189 102795592 CR1-F 264 - 102795189 102795592 0 2 173,177, 0,226, -,-, 421614 LINE CR1 1369 chr3 102802186 102802814 CR1-X2 358 + 102802186 102802814 0 2 333,193, 0,435, +,+, 421622 LINE CR1 1369 chr3 102809768 102812461 CR1-L3A_Croc 103 + 102809768 102812461 0 2 367,201, 0,2492, +,+, 421627 LINE CR1 1369 chr3 102856729 102859873 CR1-D2 724 - 102856729 102859873 0 2 188,791, 0,2353, -,-, 421659 LINE CR1 1369 chr3 102868613 102869516 CR1-E 748 + 102868613 102869516 0 2 168,297, 0,606, +,+, 421667 LINE CR1 1369 chr3 102881310 102882291 CR1-Y2_Aves 236 - 102881310 102882291 0 2 179,223, 0,758, -,-, 421678 LINE CR1 1369 chr3 102889742 102889794 (AGAAC)n 426 + 102889742 102889794 0 2 7,18, 0,34, +,+, 421685 Simple_repeat Simple_repeat 1370 chr3 102924857 102926121 Mariner1_GG 596 - 102924857 102926121 0 3 656,232,91, 0,941,1173, -,-,-, 421712 DNA TcMar-Mariner 1370 chr3 102945904 102947168 Mariner1_GG 596 - 102945904 102947168 0 3 656,232,91, 0,941,1173, -,-,-, 421722 DNA TcMar-Mariner 1370 chr3 102957924 102959152 CR1-D 626 + 102957924 102959152 0 2 358,420, 0,808, +,+, 421733 LINE CR1 1371 chr3 103035374 103036606 CR1-D2 413 + 103035374 103036606 0 2 662,570, 0,662, +,+, 421805 LINE CR1 1371 chr3 103048416 103051052 CR1-G 843 + 103048416 103051052 0 2 2205,431, 0,2205, +,+, 421817 LINE CR1 1371 chr3 103059208 103059834 CR1-Y1_Aves 525 - 103059208 103059834 0 2 113,159, 0,467, -,-, 421822 LINE CR1 1371 chr3 103129021 103130178 CR1-C3 521 - 103129021 103130178 0 2 613,544, 0,613, -,-, 421878 LINE CR1 1371 chr3 103140917 103141454 CR1-D2 638 + 103140917 103141454 0 2 322,215, 0,322, +,+, 421889 LINE CR1 1371 chr3 103142926 103142996 A-rich 342 + 103142926 103142996 0 2 32,14, 0,56, +,+, 421890 Low_complexity Low_complexity 1372 chr3 103155481 103155597 A-rich 533 + 103155481 103155597 0 2 52,36, 0,80, +,+, 421905 Low_complexity Low_complexity 1372 chr3 103171476 103173937 CR1-F 593 + 103171476 103173937 0 2 913,1548, 0,913, +,+, 421919 LINE CR1 1372 chr3 103187067 103187334 CR1-C 265 + 103187067 103187334 0 2 114,115, 0,152, +,+, 421933 LINE CR1 1372 chr3 103223588 103224563 CR1-11_Crp 158 - 103223588 103224563 0 2 403,411, 0,564, -,-, 421969 LINE CR1 1372 chr3 103246567 103246629 (AAC)n 324 + 103246567 103246629 0 2 12,19, 0,43, +,+, 422000 Simple_repeat Simple_repeat 1372 chr3 103270676 103271256 CR1-E 233 + 103270676 103271256 0 2 72,472, 0,108, +,+, 422021 LINE CR1 1372 chr3 103274583 103275196 CR1-Y2_Aves 319 - 103274583 103275196 0 2 423,190, 0,423, -,-, 422027 LINE CR1 1373 chr3 103286771 103288126 CR1-C3 469 + 103286771 103288126 0 2 1086,74, 0,1281, +,+, 422042 LINE CR1 1373 chr3 103331743 103332175 CR1-E 612 - 103331743 103332175 0 2 228,204, 0,228, -,-, 422091 LINE CR1 1373 chr3 103386640 103386794 Z-REP 242 + 103386640 103386794 0 2 65,63, 0,91, +,+, 422154 Satellite macro 1373 chr3 103393424 103397480 CR1-Y2_Aves 112 - 103393424 103397480 0 2 160,463, 0,3593, -,-, 422164 LINE CR1 1373 chr3 103393889 103394443 TguLTR5e 491 + 103393889 103394443 0 2 120,98, 0,456, +,+, 422165 LTR ERVL 1373 chr3 103400241 103404089 CR1-Y2_Aves 144 + 103400241 103404089 0 3 208,319,301, 0,1384,3547, +,+,+, 422175 LINE CR1 1373 chr3 103400461 103401573 CR1-C4 570 + 103400461 103401573 0 2 170,145, 0,967, +,+, 422176 LINE CR1 1373 chr3 103402766 103403788 GGLTR5A 326 - 103402766 103403788 0 3 99,187,270, 0,421,752, -,-,-, 422180 LTR ERVL 1373 chr3 103411776 103412248 CR1-Y2_Aves 386 - 103411776 103412248 0 2 154,318, 0,154, -,-, 422191 LINE CR1 1374 chr3 103428583 103429725 CR1-X2 578 + 103428583 103429725 0 2 139,637, 0,505, +,+, 422207 LINE CR1 1374 chr3 103491336 103491865 GGLTR5A 317 - 103491336 103491865 0 2 214,233, 0,296, -,-, 422270 LTR ERVL 1374 chr3 103497783 103498644 CR1-Y2_Aves 376 - 103497783 103498644 0 2 274,265, 0,596, -,-, 422277 LINE CR1 1374 chr3 103512247 103513006 CR1-X2 489 + 103512247 103513006 0 2 476,275, 0,484, +,+, 422289 LINE CR1 1374 chr3 103522867 103523257 CR1-F2 819 - 103522867 103523257 0 2 221,169, 0,221, -,-, 422300 LINE CR1 1374 chr3 103529357 103531824 CR1-C 857 + 103529357 103531824 0 2 149,2315, 0,152, +,+, 422308 LINE CR1 1374 chr3 103537034 103537358 MER134 346 - 103537034 103537358 0 2 114,118, 0,206, -,-, 422320 DNA? DNA? 1375 chr3 103548051 103550024 CR1-E 322 - 103548051 103550024 0 2 792,173, 0,1800, -,-, 422330 LINE CR1 1375 chr3 103557009 103557866 CR1-Y2_Aves 262 - 103557009 103557866 0 2 207,562, 0,295, -,-, 422341 LINE CR1 1376 chr3 103713414 103715115 CR1-B2 443 - 103713414 103715115 0 2 379,446, 0,1255, -,-, 422465 LINE CR1 1376 chr3 103741545 103741685 GGLTR3D 710 . 103741545 103741685 0 2 84,56, 0,84, +,-, 422491 LTR ERVL 1376 chr3 103743652 103745266 CR1-C4 483 - 103743652 103745266 0 2 423,1191, 0,423, -,-, 422492 LINE CR1 1377 chr3 103872321 103873769 CR1-B 934 + 103872321 103873769 0 2 1401,47, 0,1401, +,+, 422607 LINE CR1 1377 chr3 103898637 103902163 CR1-C4 563 - 103898637 103902163 0 3 75,98,1224, 0,2191,2302, -,-,-, 422624 LINE CR1 1377 chr3 103937884 103939582 CR1-D2 447 + 103937884 103939582 0 2 598,1100, 0,598, +,+, 422651 LINE CR1 1378 chr3 103952405 103953407 CR1-C4 577 - 103952405 103953407 0 2 460,520, 0,482, -,-, 422659 LINE CR1 1378 chr3 103997062 103998297 CR1-H2 589 - 103997062 103998297 0 2 70,56, 0,1179, -,-, 422682 LINE CR1 1378 chr3 104019380 104020363 CR1-D2 663 + 104019380 104020363 0 3 380,305,294, 0,380,689, +,+,+, 422706 LINE CR1 1378 chr3 104051803 104052405 CR1-F2 607 - 104051803 104052405 0 2 313,287, 0,315, -,-, 422736 LINE CR1 1379 chr3 104093592 104094229 CR1-D2 673 + 104093592 104094229 0 2 385,223, 0,414, +,+, 422767 LINE CR1 1379 chr3 104106021 104109007 CR1-Y4 260 - 104106021 104109007 0 2 213,268, 0,2718, -,-, 422777 LINE CR1 1379 chr3 104189552 104190885 CR1-L3B_Croc 185 - 104189552 104190885 0 2 118,440, 0,893, -,-, 422827 LINE CR1 1379 chr3 104197369 104198486 CR1-Y2_Aves 118 + 104197369 104198486 0 2 627,266, 0,851, +,+, 422832 LINE CR1 1380 chr3 104270386 104271146 CR1-Y2_Aves 103 + 104270386 104271146 0 2 360,390, 0,370, +,+, 422875 LINE CR1 1381 chr3 104426957 104427442 CR1-L3B_Croc 181 + 104426957 104427442 0 2 137,213, 0,272, +,+, 422975 LINE CR1 1381 chr3 104429872 104430155 AmnSINE1 244 - 104429872 104430155 0 2 102,140, 0,143, -,-, 422978 SINE 5S-Deu-L2 1381 chr3 104439404 104440620 CR1-L3B_Croc 215 + 104439404 104440620 0 2 351,450, 0,766, +,+, 422985 LINE CR1 1382 chr3 104502843 104503129 CR1-C4 625 + 104502843 104503129 0 2 139,147, 0,139, +,+, 423016 LINE CR1 1382 chr3 104543191 104546546 CR1-F2 440 + 104543191 104546546 0 2 283,241, 0,3114, +,+, 423045 LINE CR1 1383 chr3 104604630 104604966 CR1-11_Crp 375 - 104604630 104604966 0 2 68,228, 0,108, -,-, 423082 LINE CR1 1383 chr3 104724102 104724676 CR1-C4 621 + 104724102 104724676 0 2 285,289, 0,285, +,+, 423156 LINE CR1 1384 chr3 104787523 104789672 CR1-H 813 + 104787523 104789672 0 2 2022,127, 0,2022, +,+, 423205 LINE CR1 1384 chr3 104793045 104793244 CR1-C4 668 + 104793045 104793244 0 2 50,149, 0,50, +,+, 423207 LINE CR1 1384 chr3 104819478 104820017 CR1-E 439 - 104819478 104820017 0 2 103,259, 0,280, -,-, 423231 LINE CR1 1384 chr3 104831277 104831653 CR1-C4 625 + 104831277 104831653 0 2 151,225, 0,151, +,+, 423243 LINE CR1 1385 chr3 104863117 104863882 CR1-H2 446 - 104863117 104863882 0 2 71,177, 0,588, -,-, 423258 LINE CR1 1385 chr3 104879609 104881509 CR1-E 454 + 104879609 104881509 0 2 97,94, 0,1806, +,+, 423276 LINE CR1 1385 chr3 104888564 104889122 CR1-E 420 - 104888564 104889122 0 2 366,192, 0,366, -,-, 423280 LINE CR1 1385 chr3 104914209 104914525 CR1-Y4 503 - 104914209 104914525 0 2 114,202, 0,114, -,-, 423297 LINE CR1 1386 chr3 105008468 105008622 G-rich 584 + 105008468 105008622 0 2 52,39, 0,115, +,+, 423409 Low_complexity Low_complexity 1386 chr3 105009707 105010231 (GGATG)n 519 + 105009707 105010231 0 2 336,175, 0,349, +,+, 423412 Simple_repeat Simple_repeat 1386 chr3 105021079 105022026 CR1-H 573 - 105021079 105022026 0 2 620,81, 0,866, -,-, 423422 LINE CR1 1386 chr3 105041313 105041973 (GCATG)n 237 + 105041313 105041973 0 3 195,216,191, 0,225,469, +,+,+, 423463 Simple_repeat Simple_repeat 1386 chr3 105042123 105042506 (GCATG)n 240 + 105042123 105042506 0 2 174,198, 0,185, +,+, 423464 Simple_repeat Simple_repeat 1386 chr3 105056368 105056918 (CATCC)n 373 + 105056368 105056918 0 2 336,186, 0,364, +,+, 423485 Simple_repeat Simple_repeat 1386 chr3 105084443 105087482 CR1-F2 570 - 105084443 105087482 0 2 97,111, 0,2928, -,-, 423522 LINE CR1 1386 chr3 105089021 105089176 CR1-B2 633 + 105089021 105089176 0 2 66,55, 0,100, +,+, 423527 LINE CR1 1386 chr3 105089928 105090129 CR1-F2 479 + 105089928 105090129 0 2 100,101, 0,100, +,+, 423530 LINE CR1 1386 chr3 105096030 105096165 CR1-C4 737 - 105096030 105096165 0 3 49,42,44, 0,49,91, -,-,-, 423538 LINE CR1 1386 chr3 105098926 105099016 CR1-C4 686 + 105098926 105099016 0 2 47,43, 0,47, +,+, 423543 LINE CR1 1386 chr3 105100955 105101319 CR1-F2 458 - 105100955 105101319 0 2 197,151, 0,213, -,-, 423548 LINE CR1 1386 chr3 105106015 105106633 CR1-L3B_Croc 219 + 105106015 105106633 0 2 207,236, 0,382, +,+, 423558 LINE CR1 1386 chr3 105108776 105110449 CR1-Y4 492 + 105108776 105110449 0 2 164,91, 0,1582, +,+, 423562 LINE CR1 1386 chr3 105114750 105116444 CR1-F2 546 - 105114750 105116444 0 2 74,147, 0,1547, -,-, 423568 LINE CR1 173 chr3 105117791 105122506 CR1-F2 444 + 105117791 105122506 0 2 113,170, 0,4545, +,+, 423575 LINE CR1 1387 chr3 105122850 105123660 CR1-L3B_Croc 201 + 105122850 105123660 0 2 271,328, 0,482, +,+, 423579 LINE CR1 1387 chr3 105123819 105124035 CR1-B2 288 - 105123819 105124035 0 2 18,194, 0,22, -,-, 423581 LINE CR1 1387 chr3 105126846 105127196 CR1-F2 454 + 105126846 105127196 0 2 104,55, 0,295, +,+, 423584 LINE CR1 1387 chr3 105139942 105144429 CR1-F2 542 - 105139942 105144429 0 3 239,148,458, 0,3881,4029, -,-,-, 423598 LINE CR1 1387 chr3 105146781 105146968 CR1-F2 377 + 105146781 105146968 0 2 98,79, 0,108, +,+, 423603 LINE CR1 1387 chr3 105149603 105152154 CR1-F2 404 - 105149603 105152154 0 2 87,272, 0,2279, -,-, 423609 LINE CR1 1387 chr3 105164151 105168884 CR1-F2 502 - 105164151 105168884 0 2 263,1218, 0,3515, -,-, 423621 LINE CR1 1387 chr3 105172215 105173231 CR1-L3A_Croc 263 - 105172215 105173231 0 2 122,290, 0,726, -,-, 423636 LINE CR1 1387 chr3 105191117 105191206 CR1-C4 692 - 105191117 105191206 0 2 46,43, 0,46, -,-, 423654 LINE CR1 1387 chr3 105211991 105212549 CR1-D2 614 + 105211991 105212549 0 2 176,107, 0,451, +,+, 423678 LINE CR1 1388 chr3 105259589 105262559 CR1-F2 391 - 105259589 105262559 0 2 37,89, 0,2881, -,-, 423727 LINE CR1 1388 chr3 105265414 105266026 CR1-D 493 - 105265414 105266026 0 2 337,275, 0,337, -,-, 423733 LINE CR1 1388 chr3 105267518 105267604 CR1-C3 410 + 105267518 105267604 0 2 43,43, 0,43, +,+, 423736 LINE CR1 1388 chr3 105276018 105276276 CR1-Y3 325 + 105276018 105276276 0 2 93,138, 0,120, +,+, 423748 LINE CR1 1388 chr3 105291094 105294960 CR1-F2 226 + 105291094 105294960 0 2 239,192, 0,3674, +,+, 423759 LINE CR1 1388 chr3 105330300 105333799 CR1-F2 620 - 105330300 105333799 0 2 84,64, 0,3435, -,-, 423801 LINE CR1 1388 chr3 105338361 105338876 (CATCC)n 592 + 105338361 105338876 0 2 176,127, 0,388, +,+, 423813 Simple_repeat Simple_repeat 1389 chr3 105408573 105412433 CR1-D2 291 - 105408573 105412433 0 2 579,178, 0,3682, -,-, 423865 LINE CR1 1389 chr3 105482134 105482656 CR1-F2 754 + 105482134 105482656 0 2 115,403, 0,119, +,+, 423905 LINE CR1 1389 chr3 105499480 105499658 CR1-F2 418 - 105499480 105499658 0 2 71,101, 0,77, -,-, 423920 LINE CR1 1390 chr3 105529810 105530010 CR1-F2 398 + 105529810 105530010 0 2 107,93, 0,107, +,+, 423950 LINE CR1 1390 chr3 105554022 105556325 CR1-F2 562 - 105554022 105556325 0 2 71,83, 0,2220, -,-, 423969 LINE CR1 1390 chr3 105560306 105561146 CR1-Y4 675 - 105560306 105561146 0 2 651,140, 0,700, -,-, 423978 LINE CR1 1390 chr3 105568080 105568451 CR1-F2 321 + 105568080 105568451 0 2 215,156, 0,215, +,+, 423983 LINE CR1 1390 chr3 105570976 105571164 CR1-H2 486 - 105570976 105571164 0 2 69,91, 0,97, -,-, 423986 LINE CR1 1390 chr3 105583279 105583371 CR1-C4 687 - 105583279 105583371 0 2 49,43, 0,49, -,-, 423999 LINE CR1 1390 chr3 105585195 105585471 CR1-L3A_Croc 327 - 105585195 105585471 0 2 76,136, 0,140, -,-, 424005 LINE CR1 1390 chr3 105609384 105609485 CR1-C2 632 . 105609384 105609485 0 2 51,50, 0,51, -,+, 424040 LINE CR1 1390 chr3 105616410 105617800 CR1-C4 548 + 105616410 105617800 0 2 56,661, 0,729, +,+, 424042 LINE CR1 1390 chr3 105637317 105637464 G-rich 501 + 105637317 105637464 0 2 41,68, 0,79, +,+, 424057 Low_complexity Low_complexity 1390 chr3 105638913 105639240 CR1-F 411 + 105638913 105639240 0 2 78,72, 0,255, +,+, 424058 LINE CR1 1391 chr3 105697739 105697830 (CATATG)n 288 + 105697739 105697830 0 2 6,35, 0,56, +,+, 424111 Simple_repeat Simple_repeat 1391 chr3 105698767 105699052 CR1-F2 468 + 105698767 105699052 0 3 94,95,96, 0,94,189, +,+,+, 424114 LINE CR1 1391 chr3 105715411 105715842 CR1-F2 459 + 105715411 105715842 0 2 164,262, 0,169, +,+, 424130 LINE CR1 1392 chr3 105784092 105784276 CR1-F 535 - 105784092 105784276 0 2 116,61, 0,123, -,-, 424176 LINE CR1 1392 chr3 105790153 105790626 GGLTR5A 491 - 105790153 105790626 0 2 150,290, 0,183, -,-, 424183 LTR ERVL 1392 chr3 105801252 105801602 CR1-F2 399 - 105801252 105801602 0 2 96,254, 0,96, -,-, 424187 LINE CR1 1392 chr3 105825926 105829463 CR1-F2 515 + 105825926 105829463 0 2 114,58, 0,3479, +,+, 424211 LINE CR1 1392 chr3 105884533 105885411 CR1-Y4 625 - 105884533 105885411 0 2 527,324, 0,554, -,-, 424246 LINE CR1 1393 chr3 105910769 105914891 GGLTR7-int 389 - 105910769 105914891 0 5 260,213,1513,171,134, 0,303,692,3551,3988, -,-,-,-,-, 424258 LTR ERV1 1393 chr3 105941388 105942352 CR1-F2 511 - 105941388 105942352 0 2 475,489, 0,475, -,-, 424289 LINE CR1 1393 chr3 105946645 105946907 CR1-F2 417 - 105946645 105946907 0 2 95,94, 0,168, -,-, 424294 LINE CR1 1393 chr3 105956981 105957148 CR1-F2 574 + 105956981 105957148 0 2 84,83, 0,84, +,+, 424309 LINE CR1 1393 chr3 105963757 105964170 CR1-L3B_Croc 228 - 105963757 105964170 0 2 113,288, 0,125, -,-, 424315 LINE CR1 1393 chr3 106012409 106012588 CR1-F2 728 - 106012409 106012588 0 2 98,81, 0,98, -,-, 424368 LINE CR1 1394 chr3 106077444 106077814 CR1-C4 426 + 106077444 106077814 0 2 123,186, 0,184, +,+, 424426 LINE CR1 1394 chr3 106146470 106146830 CR1-D2 547 - 106146470 106146830 0 2 94,246, 0,114, -,-, 424505 LINE CR1 1395 chr3 106216402 106216572 CR1-F2 513 + 106216402 106216572 0 2 86,84, 0,86, +,+, 424557 LINE CR1 1395 chr3 106240989 106241416 CR1-Y1_Aves 325 - 106240989 106241416 0 2 207,218, 0,209, -,-, 424579 LINE CR1 1395 chr3 106241409 106241796 CR1-Y2_Aves 405 - 106241409 106241796 0 2 98,68, 0,319, -,-, 424580 LINE CR1 1395 chr3 106286799 106286914 CR1-D2 706 + 106286799 106286914 0 2 71,43, 0,72, +,+, 424610 LINE CR1 1396 chr3 106364541 106365094 CR1-E 644 + 106364541 106365094 0 2 362,191, 0,362, +,+, 424664 LINE CR1 1396 chr3 106378696 106379492 CR1-F2 456 + 106378696 106379492 0 2 138,658, 0,138, +,+, 424669 LINE CR1 1397 chr3 106435868 106436254 CR1-Y2_Aves 203 - 106435868 106436254 0 2 172,189, 0,197, -,-, 424701 LINE CR1 1397 chr3 106443677 106444293 CR1-C 829 + 106443677 106444293 0 2 537,79, 0,537, +,+, 424707 LINE CR1 1397 chr3 106460621 106460896 CR1-X1 334 + 106460621 106460896 0 2 140,135, 0,140, +,+, 424712 LINE CR1 1397 chr3 106527765 106528590 CR1-D2 755 - 106527765 106528590 0 2 739,86, 0,739, -,-, 424743 LINE CR1 1397 chr3 106528813 106529481 CR1-F2 657 - 106528813 106529481 0 2 128,540, 0,128, -,-, 424744 LINE CR1 1397 chr3 106560189 106561420 CR1-L3B_Croc 196 - 106560189 106561420 0 2 494,223, 0,1008, -,-, 424755 LINE CR1 1398 chr3 106594842 106597056 CR1-Y3 568 + 106594842 106597056 0 4 1014,188,188,824, 0,1014,1202,1390, +,+,+,+, 424771 LINE CR1 1398 chr3 106648551 106651434 CR1-D 721 - 106648551 106651434 0 2 1027,1854, 0,1029, -,-, 424800 LINE CR1 1398 chr3 106679921 106685439 CR1-C2 543 + 106679921 106685439 0 2 39,250, 0,5268, +,+, 424816 LINE CR1 1399 chr3 106804757 106804944 CR1-B 511 + 106804757 106804944 0 4 55,44,44,44, 0,55,99,143, +,+,+,+, 424900 LINE CR1 1400 chr3 106838770 106839585 CR1-F0 550 + 106838770 106839585 0 2 177,80, 0,735, +,+, 424942 LINE CR1 1400 chr3 106849520 106849760 CR1-X1 622 + 106849520 106849760 0 2 118,122, 0,118, +,+, 424948 LINE CR1 1400 chr3 106859430 106859902 CR1-H2 356 + 106859430 106859902 0 2 25,72, 0,400, +,+, 424958 LINE CR1 1400 chr3 106878457 106879045 CR1-L3A_Croc 343 + 106878457 106879045 0 2 217,59, 0,529, +,+, 424973 LINE CR1 1400 chr3 106882271 106882676 CR1-D2 556 + 106882271 106882676 0 2 96,309, 0,96, +,+, 424976 LINE CR1 1400 chr3 106882900 106883003 (GCCGCTC)n 322 + 106882900 106883003 0 2 30,12, 0,91, +,+, 424977 Simple_repeat Simple_repeat 1400 chr3 106922412 106922736 CR1-B2 750 + 106922412 106922736 0 2 244,54, 0,270, +,+, 425008 LINE CR1 1400 chr3 106930045 106930359 CR1-D2 564 + 106930045 106930359 0 2 128,186, 0,128, +,+, 425016 LINE CR1 1401 chr3 106970890 106971429 CR1-C3 704 + 106970890 106971429 0 3 91,278,162, 0,99,377, +,+,+, 425044 LINE CR1 1402 chr3 107098319 107100897 CR1-Y2_Aves 397 - 107098319 107100897 0 2 60,382, 0,2196, -,-, 425151 LINE CR1 1402 chr3 107115164 107118799 CR1-F2 402 - 107115164 107118799 0 2 163,202, 0,3433, -,-, 425167 LINE CR1 1402 chr3 107191221 107194779 CR1-H2 762 - 107191221 107194779 0 2 73,451, 0,3107, -,-, 425245 LINE CR1 1403 chr3 107240259 107240626 CR1-F2 442 + 107240259 107240626 0 2 68,269, 0,98, +,+, 425284 LINE CR1 1403 chr3 107251523 107252415 Char12Mar1_GG 556 - 107251523 107252415 0 2 575,317, 0,575, -,-, 425295 DNA hAT-Charlie 1403 chr3 107261375 107263462 CR1-Y2_Aves 639 + 107261375 107263462 0 2 59,39, 0,2048, +,+, 425303 LINE CR1 1403 chr3 107278935 107279329 Char12Mar1_GG 668 - 107278935 107279329 0 3 136,99,154, 0,141,240, -,-,-, 425325 DNA hAT-Charlie 1403 chr3 107304272 107304660 CR1-C4 602 - 107304272 107304660 0 2 48,69, 0,319, -,-, 425339 LINE CR1 1403 chr3 107345027 107345762 CR1-Y1_Aves 345 + 107345027 107345762 0 2 411,324, 0,411, +,+, 425378 LINE CR1 1404 chr3 107354874 107357034 CR1-C3 642 + 107354874 107357034 0 3 629,213,966, 0,981,1194, +,+,+, 425385 LINE CR1 1405 chr3 107512346 107516897 CR1-C4 455 - 107512346 107516897 0 4 40,378,69,118, 0,250,3709,4433, -,-,-,-, 425540 LINE CR1 1406 chr3 107649637 107649841 CR1-X2 726 - 107649637 107649841 0 2 38,63, 0,141, -,-, 425668 LINE CR1 1406 chr3 107728345 107732296 CR1-F2 424 + 107728345 107732296 0 2 151,243, 0,3708, +,+, 425734 LINE CR1 1408 chr3 107903003 107907424 CR1-D2 631 + 107903003 107907424 0 2 830,127, 0,4294, +,+, 425895 LINE CR1 1408 chr3 107907467 107910468 CR1-F2 463 + 107907467 107910468 0 2 160,65, 0,2936, +,+, 425902 LINE CR1 1408 chr3 107935770 107936092 (GGATG)n 714 + 107935770 107936092 0 2 73,65, 0,257, +,+, 425935 Simple_repeat Simple_repeat 1409 chr3 108094389 108099098 CR1-L3B_Croc 170 + 108094389 108099098 0 2 270,242, 0,4467, +,+, 426080 LINE CR1 1410 chr3 108155817 108157354 CR1-L3B_Croc 246 + 108155817 108157354 0 3 189,246,141, 0,251,1396, +,+,+, 426139 LINE CR1 1410 chr3 108169054 108170044 CR1-B2 802 + 108169054 108170044 0 2 232,758, 0,232, +,+, 426155 LINE CR1 1410 chr3 108183874 108185009 CR1-C4 301 + 108183874 108185009 0 4 407,201,106,264, 0,564,765,871, +,+,+,+, 426170 LINE CR1 1410 chr3 108225517 108225596 (TTTTCTA)n 346 + 108225517 108225596 0 2 15,26, 0,53, +,+, 426199 Simple_repeat Simple_repeat 1411 chr3 108276063 108276870 Mariner1_GG 535 - 108276063 108276870 0 2 671,136, 0,671, -,-, 426243 DNA TcMar-Mariner 1411 chr3 108280513 108281019 CR1-L3B_Croc 390 - 108280513 108281019 0 2 71,90, 0,416, -,-, 426249 LINE CR1 1411 chr3 108283847 108284362 CR1-D 705 + 108283847 108284362 0 3 319,121,73, 0,321,442, +,+,+, 426252 LINE CR1 1412 chr3 108402491 108402852 CR1-Y2_Aves 350 + 108402491 108402852 0 2 171,92, 0,269, +,+, 426377 LINE CR1 1412 chr3 108421551 108422940 CR1-D2 654 + 108421551 108422940 0 2 98,167, 0,1222, +,+, 426399 LINE CR1 1412 chr3 108471514 108471561 (TTCTT)n 432 + 108471514 108471561 0 2 17,11, 0,36, +,+, 426445 Simple_repeat Simple_repeat 1412 chr3 108473987 108474282 CR1-C4 672 - 108473987 108474282 0 2 75,202, 0,93, -,-, 426447 LINE CR1 1413 chr3 108606958 108608483 CR1-Y1_Aves 554 - 108606958 108608483 0 2 78,157, 0,1368, -,-, 426560 LINE CR1 1413 chr3 108618847 108620685 CR1-L3B_Croc 286 + 108618847 108620685 0 3 115,532,109, 0,152,1729, +,+,+, 426572 LINE CR1 1413 chr3 108647715 108648635 CR1-Y2_Aves 366 - 108647715 108648635 0 2 192,710, 0,210, -,-, 426593 LINE CR1 1414 chr3 108690314 108690434 (TCTCT)n 190 + 108690314 108690434 0 2 14,35, 0,85, +,+, 426645 Simple_repeat Simple_repeat 1414 chr3 108709152 108709242 (CTCT)n 206 + 108709152 108709242 0 2 15,25, 0,65, +,+, 426674 Simple_repeat Simple_repeat 1414 chr3 108767140 108767434 CR1-F2 326 + 108767140 108767434 0 2 225,32, 0,262, +,+, 426749 LINE CR1 1415 chr3 108893576 108894098 CR1-Y4 614 - 108893576 108894098 0 2 228,294, 0,228, -,-, 426896 LINE CR1 1416 chr3 108975300 108976001 CR1-F2 620 + 108975300 108976001 0 2 71,185, 0,516, +,+, 426968 LINE CR1 1416 chr3 108975376 108975810 CR1-G 757 - 108975376 108975810 0 2 380,53, 0,381, -,-, 426970 LINE CR1 1416 chr3 109050738 109051374 CR1-H 871 - 109050738 109051374 0 2 585,51, 0,585, -,-, 427052 LINE CR1 1417 chr3 109065421 109065852 CR1-C2 866 + 109065421 109065852 0 2 50,381, 0,50, +,+, 427066 LINE CR1 1417 chr3 109119837 109120559 CR1-Y1_Aves 405 - 109119837 109120559 0 2 363,60, 0,662, -,-, 427110 LINE CR1 1418 chr3 109212524 109215057 CR1-G 542 + 109212524 109215057 0 2 108,2425, 0,108, +,+, 427206 LINE CR1 1418 chr3 109255301 109256801 CR1-Y1_Aves 504 + 109255301 109256801 0 2 169,195, 0,1305, +,+, 427237 LINE CR1 1418 chr3 109269953 109271047 CR1-F2 388 + 109269953 109271047 0 2 199,672, 0,422, +,+, 427247 LINE CR1 1418 chr3 109293743 109294446 CR1-C 663 - 109293743 109294446 0 2 254,436, 0,267, -,-, 427262 LINE CR1 1419 chr3 109408555 109409232 CR1-X2 376 + 109408555 109409232 0 3 128,83,189, 0,174,488, +,+,+, 427344 LINE CR1 1419 chr3 109409424 109410273 CR1-D2 623 + 109409424 109410273 0 3 400,128,306, 0,415,543, +,+,+, 427349 LINE CR1 1419 chr3 109415989 109416433 CR1-D 768 + 109415989 109416433 0 2 217,124, 0,320, +,+, 427357 LINE CR1 1420 chr3 109475206 109475268 (TTAATT)n 388 + 109475206 109475268 0 2 11,7, 0,55, +,+, 427418 Simple_repeat Simple_repeat 1420 chr3 109574045 109575334 CR1-Y 552 + 109574045 109575334 0 2 154,1135, 0,154, +,+, 427506 LINE CR1 1421 chr3 109577251 109578224 CR1-L3A_Croc 195 - 109577251 109578224 0 2 182,274, 0,699, -,-, 427508 LINE CR1 1421 chr3 109649066 109650390 CR1-H 793 - 109649066 109650390 0 2 165,191, 0,1133, -,-, 427573 LINE CR1 1421 chr3 109687476 109687992 CR1-Y2_Aves 295 - 109687476 109687992 0 2 116,283, 0,233, -,-, 427603 LINE CR1 1422 chr3 109728545 109729188 CR1-E 689 + 109728545 109729188 0 2 479,164, 0,479, +,+, 427639 LINE CR1 1422 chr3 109737255 109737932 CR1-Y2_Aves 374 + 109737255 109737932 0 3 196,90,187, 0,384,490, +,+,+, 427651 LINE CR1 1422 chr3 109786625 109790058 CR1-C2 683 - 109786625 109790058 0 2 89,108, 0,3325, -,-, 427685 LINE CR1 1423 chr3 109865414 109865654 CR1-C2 842 - 109865414 109865654 0 2 103,137, 0,103, -,-, 427765 LINE CR1 1424 chr3 109991109 109993588 CR1-Y4 399 + 109991109 109993588 0 2 139,95, 0,2384, +,+, 427877 LINE CR1 1424 chr3 110012694 110014147 CR1-F2 518 - 110012694 110014147 0 2 120,484, 0,969, -,-, 427898 LINE CR1 1424 chr3 110025170 110026496 REP131 209 - 110025170 110026496 0 3 302,122,189, 0,854,1137, -,-,-, 427906 DNA? DNA? 1424 chr3 110044001 110044237 CR1-Y1_Aves 304 - 110044001 110044237 0 2 30,127, 0,109, -,-, 427919 LINE CR1 1425 chr3 110157205 110157524 CR1-D2 512 - 110157205 110157524 0 2 150,169, 0,150, -,-, 428009 LINE CR1 1426 chr3 110246305 110247205 CR1-Y1_Aves 314 - 110246305 110247205 0 2 202,225, 0,675, -,-, 428076 LINE CR1 1426 chr3 110288075 110288735 CR1-H 802 + 110288075 110288735 0 2 549,111, 0,549, +,+, 428104 LINE CR1 1426 chr3 110348994 110350289 CR1-H2 521 + 110348994 110350289 0 2 189,451, 0,844, +,+, 428162 LINE CR1 1426 chr3 110353010 110353893 CR1-Y4 730 - 110353010 110353893 0 2 439,436, 0,447, -,-, 428166 LINE CR1 1427 chr3 110367320 110367535 CR1-C2 815 - 110367320 110367535 0 2 97,111, 0,104, -,-, 428174 LINE CR1 1427 chr3 110401666 110401895 CR1-C2 841 - 110401666 110401895 0 2 94,135, 0,94, -,-, 428205 LINE CR1 1427 chr3 110417531 110420894 CR1-F0 339 - 110417531 110420894 0 2 92,146, 0,3217, -,-, 428215 LINE CR1 1427 chr3 110457063 110457453 CR1-H 565 - 110457063 110457453 0 2 282,12, 0,378, -,-, 428243 LINE CR1 1428 chr3 110502266 110503039 Char12Mar1_GG 565 - 110502266 110503039 0 2 248,508, 0,265, -,-, 428293 DNA hAT-Charlie 1428 chr3 110558456 110558918 CR1-C4 508 - 110558456 110558918 0 2 213,249, 0,213, -,-, 428333 LINE CR1 1428 chr3 110598752 110602028 CR1-B2 666 - 110598752 110602028 0 2 72,249, 0,3027, -,-, 428372 LINE CR1 1429 chr3 110674081 110675171 CR1-H2 632 - 110674081 110675171 0 2 71,239, 0,851, -,-, 428432 LINE CR1 1429 chr3 110720189 110720244 (CCTCTC)n 418 + 110720189 110720244 0 2 22,8, 0,47, +,+, 428467 Simple_repeat Simple_repeat 1429 chr3 110740927 110741525 CR1-D 715 - 110740927 110741525 0 2 268,262, 0,336, -,-, 428489 LINE CR1 1430 chr3 110784679 110785773 CR1-D 759 + 110784679 110785773 0 2 66,802, 0,292, +,+, 428521 LINE CR1 1430 chr3 110812674 110812788 GA-rich 552 + 110812674 110812788 0 2 26,55, 0,59, +,+, 428552 Low_complexity Low_complexity 1430 chr3 110839154 110839615 CR1-C 684 + 110839154 110839615 0 2 402,24, 0,437, +,+, 428573 LINE CR1 1430 chr3 110864447 110864490 (TTTTGG)n 550 + 110864447 110864490 0 2 7,8, 0,35, +,+, 428592 Simple_repeat Simple_repeat 1430 chr3 110870997 110871484 CR1-E 353 - 110870997 110871484 0 2 103,78, 0,409, -,-, 428601 LINE CR1 1431 chr3 111015004 111016562 Charlie12_GG 697 - 111015004 111016562 0 2 1019,120, 0,1438, -,-, 428712 DNA hAT-Charlie 1432 chr3 111074250 111074905 CR1-L3B_Croc 122 + 111074250 111074905 0 2 218,159, 0,496, +,+, 428748 LINE CR1 1432 chr3 111091330 111091652 GGLTR5A 581 - 111091330 111091652 0 2 76,242, 0,80, -,-, 428763 LTR ERVL 1433 chr3 111152445 111153005 CR1-D 602 - 111152445 111153005 0 2 420,140, 0,420, -,-, 428810 LINE CR1 1433 chr3 111184322 111184755 CR1-Y2_Aves 205 + 111184322 111184755 0 2 143,240, 0,193, +,+, 428827 LINE CR1 1433 chr3 111188301 111188633 CR1-E 728 - 111188301 111188633 0 2 255,77, 0,255, -,-, 428830 LINE CR1 1433 chr3 111188625 111189729 CR1-D 707 + 111188625 111189729 0 2 777,327, 0,777, +,+, 428831 LINE CR1 1433 chr3 111199597 111200158 CR1-Y2_Aves 367 + 111199597 111200158 0 2 270,287, 0,274, +,+, 428839 LINE CR1 1433 chr3 111200307 111201262 CR1-H 783 + 111200307 111201262 0 2 686,269, 0,686, +,+, 428840 LINE CR1 1433 chr3 111253227 111256275 GGLTR7A 746 + 111253227 111256275 0 2 552,2496, 0,552, +,+, 428879 LTR ERV1 585 chr30_NT_463422v1_random 1017 1154 CR1-C4 634 - 1017 1154 0 2 55,49, 0,88, -,-, 428964 LINE CR1 585 chr30_NT_463422v1_random 1149 1330 CR1-C4 634 - 1149 1330 0 2 55,49, 0,132, -,-, 428966 LINE CR1 585 chr30_NT_463422v1_random 1369 1550 CR1-C4 638 - 1369 1550 0 4 55,38,44,44, 0,55,93,137, -,-,-,-, 428969 LINE CR1 585 chr30_NT_463422v1_random 2036 2194 CR1-C4 646 - 2036 2194 0 3 55,52,51, 0,55,107, -,-,-, 428973 LINE CR1 585 chr30_NT_463422v1_random 3395 3758 CR1-B2 338 - 3395 3758 0 2 64,132, 0,231, -,-, 428979 LINE CR1 585 chr30_NT_463422v1_random 8751 10693 CR1-Y4 390 - 8751 10693 0 2 98,171, 0,1771, -,-, 428989 LINE CR1 585 chr30_NT_463422v1_random 14332 14743 CR1-Y4 663 - 14332 14743 0 7 63,58,58,58,58,58,58, 0,63,121,179,237,295,353, -,-,-,-,-,-,-, 429000 LINE CR1 585 chr30_NT_463422v1_random 14797 15092 CR1-Y4 599 - 14797 15092 0 5 63,54,62,58,57, 0,63,117,179,238, -,-,-,-,-, 429002 LINE CR1 585 chr30_NT_463422v1_random 15146 15432 CR1-Y4 588 - 15146 15432 0 5 62,58,58,58,50, 0,62,120,178,236, -,-,-,-,-, 429004 LINE CR1 585 chr30_NT_463422v1_random 16347 16696 CR1-Y4 562 - 16347 16696 0 6 59,58,58,58,58,58, 0,59,117,175,233,291, -,-,-,-,-,-, 429005 LINE CR1 585 chr30_NT_463422v1_random 20247 20555 (CCCCATTGGG)n 446 - 20247 20555 0 2 134,137, 0,171, -,-, 429013 Satellite Satellite 585 chr30_NT_463422v1_random 26520 27653 CR1-B2 677 + 26520 27653 0 2 47,57, 0,1076, +,+, 429022 LINE CR1 585 chr30_NT_463422v1_random 26606 26753 CR1-E 622 + 26606 26753 0 3 53,45,49, 0,53,98, +,+,+, 429023 LINE CR1 585 chr30_NT_463422v1_random 26853 26957 CR1-E 641 + 26853 26957 0 2 53,51, 0,53, +,+, 429024 LINE CR1 585 chr30_NT_463422v1_random 34175 34721 CR1-X2 366 - 34175 34721 0 2 207,336, 0,210, -,-, 429038 LINE CR1 585 chr30_NT_463422v1_random 37003 37371 CR1-X 513 - 37003 37371 0 2 57,230, 0,138, -,-, 429040 LINE CR1 585 chr30_NT_463422v1_random 45788 46039 CR1-X2 594 + 45788 46039 0 2 130,119, 0,132, +,+, 429042 LINE CR1 585 chr30_NT_463423v1_random 3990 4102 (C)n 734 + 3990 4102 0 2 37,22, 0,90, +,+, 429075 Simple_repeat Simple_repeat 585 chr30_NT_463423v1_random 11371 11522 (C)n 640 + 11371 11522 0 2 29,61, 0,90, +,+, 429097 Simple_repeat Simple_repeat 585 chr30_NT_463424v1_random 2568 2814 (CTCTATGGGG)n 292 + 2568 2814 0 2 116,114, 0,132, +,+, 429140 Satellite Satellite 585 chr30_NT_463424v1_random 9186 9424 GA-rich 282 + 9186 9424 0 2 136,48, 0,190, +,+, 429144 Low_complexity Low_complexity 585 chr30_NT_463426v1_random 750 1115 CR1-B 673 + 750 1115 0 2 59,58, 0,307, +,+, 429198 LINE CR1 585 chr30_NT_463426v1_random 889 982 CR1-C4 674 + 889 982 0 2 49,44, 0,49, +,+, 429199 LINE CR1 585 chr31 9261 9886 GGERVK10-int 310 + 9261 9886 0 3 94,141,86, 0,259,539, +,+,+, 429264 LTR ERVK 585 chr31 24220 25805 CR1-H 762 + 24220 25805 0 2 297,1288, 0,297, +,+, 429276 LINE CR1 585 chr31 32299 33088 CR1-F 270 + 32299 33088 0 2 216,573, 0,216, +,+, 429282 LINE CR1 585 chr31 47558 48046 GGLTR3F2 612 + 47558 48046 0 2 232,212, 0,276, +,+, 429293 LTR ERVL 585 chr31_NT_463431v1_random 8239 10262 CR1-H 762 + 8239 10262 0 2 298,1725, 0,298, +,+, 429303 LINE CR1 585 chr31_NT_463432v1_random 6818 7307 GGLTR3F2 604 + 6818 7307 0 2 232,213, 0,276, +,+, 429316 LTR ERVL 585 chr31_NT_463432v1_random 8171 9307 CR1-F 803 - 8171 9307 0 2 293,343, 0,793, -,-, 429319 LINE CR1 585 chr31_NT_463433v1_random 733 1231 GGLTR3F2 504 + 733 1231 0 2 241,210, 0,288, +,+, 429329 LTR ERVL 585 chr31_NT_463433v1_random 2223 2871 GGERVK10-int 352 - 2223 2871 0 3 81,140,57, 0,228,591, -,-,-, 429332 LTR ERVK 585 chr31_NT_463433v1_random 13974 14732 CR1-F 260 - 13974 14732 0 2 549,209, 0,549, -,-, 429343 LINE CR1 585 chr31_NT_463435v1_random 8692 9489 CR1-F 274 - 8692 9489 0 2 586,211, 0,586, -,-, 429364 LINE CR1 585 chr32 39726 40073 (CACAG)n 341 + 39726 40073 0 2 188,142, 0,205, +,+, 429430 Simple_repeat Simple_repeat 585 chr32_NT_463442v1_random 6848 7014 CR1-H 508 - 6848 7014 0 2 74,78, 0,88, -,-, 429487 LINE CR1 585 chr32_NT_463442v1_random 12332 12970 A-rich 442 + 12332 12970 0 2 561,59, 0,579, +,+, 429497 Low_complexity Low_complexity 585 chr32_NT_463442v1_random 21995 22111 CR1-X2 489 + 21995 22111 0 2 56,60, 0,56, +,+, 429505 LINE CR1 585 chr32_NT_463442v1_random 48885 48971 (CTC)n 262 + 48885 48971 0 2 6,45, 0,41, +,+, 429548 Simple_repeat Simple_repeat 585 chr32_NT_463443v1_random 32175 32428 (CCCCATTGGG)n 362 + 32175 32428 0 2 123,118, 0,135, +,+, 429582 Satellite Satellite 585 chr32_NT_463443v1_random 35688 36182 (ACCCATAGGG)n 554 - 35688 36182 0 3 119,126,134, 0,171,360, -,-,-, 429583 Satellite Satellite 585 chr32_NT_463445v1_random 1284 1518 (ATGTCCCCCC)n 849 + 1284 1518 0 3 49,48,49, 0,93,185, +,+,+, 429648 Simple_repeat Simple_repeat 585 chr32_NT_463450v1_random 17348 17446 (C)n 791 + 17348 17446 0 2 33,22, 0,76, +,+, 429692 Simple_repeat Simple_repeat 585 chr33 6021 6092 (GGC)n 332 + 6021 6092 0 2 11,41, 0,30, +,+, 429713 Simple_repeat Simple_repeat 585 chr33 13814 13985 CR1-Y2 577 + 13814 13985 0 2 79,64, 0,107, +,+, 429724 LINE CR1 585 chr33 14100 14227 CR1-Y2 596 + 14100 14227 0 2 49,64, 0,63, +,+, 429726 LINE CR1 585 chr33 25044 25411 (CATG)n 324 + 25044 25411 0 2 140,43, 0,324, +,+, 429742 Simple_repeat Simple_repeat 585 chr33 28609 29023 (TGGA)n 536 + 28609 29023 0 2 182,186, 0,228, +,+, 429746 Simple_repeat Simple_repeat 585 chr33 43741 43904 (C)n 805 + 43741 43904 0 3 30,32,17, 0,55,146, +,+,+, 429768 Simple_repeat Simple_repeat 585 chr33 72517 72701 CR1-D2 588 - 72517 72701 0 2 97,87, 0,97, -,-, 429799 LINE CR1 585 chr33 72783 72972 CR1-D2 618 - 72783 72972 0 2 91,98, 0,91, -,-, 429801 LINE CR1 585 chr33 114130 114273 CR1-F2 487 - 114130 114273 0 2 78,65, 0,78, -,-, 429831 LINE CR1 587 chr33 353697 356843 CR1-C4 411 + 353697 356843 0 3 152,124,174, 0,152,2972, +,+,+, 429935 LINE CR1 588 chr33 484894 485432 CR1-F 231 - 484894 485432 0 2 435,100, 0,438, -,-, 430026 LINE CR1 588 chr33 502285 502678 (CATCC)n 701 + 502285 502678 0 2 191,191, 0,202, +,+, 430043 Simple_repeat Simple_repeat 589 chr33 580243 580760 CR1-D2 450 + 580243 580760 0 2 465,52, 0,465, +,+, 430139 LINE CR1 589 chr33 600021 600086 (CCGCC)n 442 + 600021 600086 0 2 21,6, 0,59, +,+, 430160 Simple_repeat Simple_repeat 589 chr33 630342 630425 G-rich 432 + 630342 630425 0 2 42,11, 0,72, +,+, 430199 Low_complexity Low_complexity 589 chr33 641434 641957 (GGATG)n 631 + 641434 641957 0 3 181,43,227, 0,233,296, +,+,+, 430216 Simple_repeat Simple_repeat 589 chr33 643131 643244 (C)n 776 + 643131 643244 0 2 32,27, 0,86, +,+, 430221 Simple_repeat Simple_repeat 589 chr33 644004 644114 (C)n 681 + 644004 644114 0 2 31,32, 0,78, +,+, 430224 Simple_repeat Simple_repeat 590 chr33 703287 703392 (C)n 778 + 703287 703392 0 2 27,19, 0,86, +,+, 430303 Simple_repeat Simple_repeat 590 chr33 752153 752212 (CCCCGCA)n 380 + 752153 752212 0 2 13,12, 0,47, +,+, 430354 Simple_repeat Simple_repeat 590 chr33 753240 753313 (C)n 800 + 753240 753313 0 2 19,31, 0,42, +,+, 430359 Simple_repeat Simple_repeat 590 chr33 784534 784705 G-rich 604 + 784534 784705 0 2 73,72, 0,99, +,+, 430410 Low_complexity Low_complexity 591 chr33 793137 793223 (C)n 744 + 793137 793223 0 2 22,33, 0,53, +,+, 430419 Simple_repeat Simple_repeat 591 chr33 794074 794181 (C)n 811 + 794074 794181 0 2 24,20, 0,87, +,+, 430420 Simple_repeat Simple_repeat 591 chr33 796046 796194 (T)n 839 + 796046 796194 0 2 50,40, 0,108, +,+, 430428 Simple_repeat Simple_repeat 591 chr33 797052 797128 (G)n 811 + 797052 797128 0 2 28,29, 0,47, +,+, 430434 Simple_repeat Simple_repeat 591 chr33 810109 810184 (GCC)n 508 + 810109 810184 0 2 22,6, 0,69, +,+, 430457 Simple_repeat Simple_repeat 591 chr33 849278 849392 (C)n 691 + 849278 849392 0 2 36,46, 0,68, +,+, 430523 Simple_repeat Simple_repeat 591 chr33 886051 886229 CR1-E 710 - 886051 886229 0 2 103,75, 0,103, -,-, 430580 LINE CR1 592 chr33 940817 940962 CR1-F0 502 - 940817 940962 0 2 73,57, 0,88, -,-, 430627 LINE CR1 592 chr33 1008519 1008611 (GT)n 866 + 1008519 1008611 0 2 41,27, 0,65, +,+, 430720 Simple_repeat Simple_repeat 592 chr33 1023637 1023722 A-rich 604 + 1023637 1023722 0 2 35,28, 0,57, +,+, 430756 Low_complexity Low_complexity 593 chr33 1081722 1082007 (CTCTATGGGG)n 628 - 1081722 1082007 0 2 105,61, 0,224, -,-, 430926 Satellite Satellite 593 chr33 1095682 1095781 (CT)n 320 + 1095682 1095781 0 2 47,22, 0,77, +,+, 430963 Simple_repeat Simple_repeat 593 chr33 1114666 1114744 (C)n 731 + 1114666 1114744 0 2 24,25, 0,53, +,+, 431007 Simple_repeat Simple_repeat 593 chr33 1139115 1139647 (ACCCCATAGGG)n 429 - 1139115 1139647 0 2 217,284, 0,248, -,-, 431029 Satellite Satellite 594 chr33 1207069 1207518 CR1-X2 595 + 1207069 1207518 0 2 56,343, 0,106, +,+, 431102 LINE CR1 594 chr33 1216608 1217518 CR1-X2 486 + 1216608 1217518 0 2 209,272, 0,638, +,+, 431107 LINE CR1 594 chr33 1263669 1263976 CR1-F2 441 - 1263669 1263976 0 2 89,218, 0,89, -,-, 431127 LINE CR1 594 chr33 1275399 1275473 CR1-H2 911 - 1275399 1275473 0 2 34,33, 0,41, -,-, 431132 LINE CR1 595 chr33 1322246 1322377 CR1-E 661 - 1322246 1322377 0 3 45,43,43, 0,45,88, -,-,-, 431156 LINE CR1 595 chr33 1325477 1325575 CR1-E 512 + 1325477 1325575 0 2 48,50, 0,48, +,+, 431161 LINE CR1 595 chr33 1329129 1329406 CR1-C4 460 + 1329129 1329406 0 2 127,150, 0,127, +,+, 431162 LINE CR1 595 chr33 1329445 1329535 CR1-E 622 + 1329445 1329535 0 2 47,43, 0,47, +,+, 431164 LINE CR1 595 chr33 1367759 1368149 CR1-C4 444 - 1367759 1368149 0 2 58,255, 0,135, -,-, 431187 LINE CR1 595 chr33 1416529 1417206 CR1-F2 390 - 1416529 1417206 0 2 147,524, 0,153, -,-, 431208 LINE CR1 596 chr33 1442393 1443016 CR1-Y4 615 + 1442393 1443016 0 2 509,109, 0,514, +,+, 431218 LINE CR1 596 chr33 1452994 1453788 CR1-D2 750 - 1452994 1453788 0 2 462,307, 0,487, -,-, 431220 LINE CR1 596 chr33 1482196 1482446 CR1-E 570 - 1482196 1482446 0 2 61,73, 0,177, -,-, 431242 LINE CR1 596 chr33 1484237 1484328 CR1-C4 629 - 1484237 1484328 0 2 49,42, 0,49, -,-, 431248 LINE CR1 596 chr33 1484410 1484500 CR1-E 729 - 1484410 1484500 0 2 48,42, 0,48, -,-, 431251 LINE CR1 596 chr33 1491399 1495612 CR1-F2 449 - 1491399 1495612 0 2 59,243, 0,3970, -,-, 431256 LINE CR1 596 chr33 1496574 1496859 CR1-Y4 495 + 1496574 1496859 0 2 95,190, 0,95, +,+, 431265 LINE CR1 596 chr33 1504971 1505641 CR1-Y4 463 - 1504971 1505641 0 3 31,13,172, 0,82,498, -,-,-, 431269 LINE CR1 596 chr33 1505002 1505200 CR1-D2 705 - 1505002 1505200 0 2 51,43, 0,155, -,-, 431270 LINE CR1 596 chr33 1510969 1511407 CR1-B2 409 + 1510969 1511407 0 2 135,96, 0,342, +,+, 431277 LINE CR1 596 chr33 1513822 1513920 CR1-C4 785 - 1513822 1513920 0 2 55,43, 0,55, -,-, 431282 LINE CR1 596 chr33 1513958 1514051 CR1-C4 816 - 1513958 1514051 0 2 49,44, 0,49, -,-, 431284 LINE CR1 596 chr33 1514857 1515330 (ACCCATAGAG)n 510 - 1514857 1515330 0 2 230,229, 0,244, -,-, 431289 Satellite Satellite 596 chr33 1526363 1526468 CR1-C4 649 - 1526363 1526468 0 2 54,51, 0,54, -,-, 431312 LINE CR1 596 chr33 1532760 1533154 CR1-C3 518 - 1532760 1533154 0 2 47,203, 0,191, -,-, 431320 LINE CR1 596 chr33 1542152 1542631 (GCATG)n 612 + 1542152 1542631 0 2 322,41, 0,438, +,+, 431331 Simple_repeat Simple_repeat 596 chr33 1542687 1543074 (GCATG)n 559 + 1542687 1543074 0 2 190,181, 0,206, +,+, 431334 Simple_repeat Simple_repeat 596 chr33 1543588 1544088 (GGATG)n 606 + 1543588 1544088 0 2 226,101, 0,399, +,+, 431337 Simple_repeat Simple_repeat 596 chr33 1545377 1545937 (GCATG)n 640 + 1545377 1545937 0 2 179,355, 0,205, +,+, 431347 Simple_repeat Simple_repeat 596 chr33 1560134 1561782 (GCATG)n 589 + 1560134 1561782 0 6 223,152,245,209,201,395, 0,427,598,843,1052,1253, +,+,+,+,+,+, 431362 Simple_repeat Simple_repeat 596 chr33 1561578 1562013 (CATAG)n 490 + 1561578 1562013 0 2 234,23, 0,412, +,+, 431365 Simple_repeat Simple_repeat 597 chr33 1594311 1594361 (CCCGCGC)n 348 + 1594311 1594361 0 2 7,19, 0,31, +,+, 431417 Simple_repeat Simple_repeat 597 chr33 1634230 1634324 (C)n 888 + 1634230 1634324 0 2 18,29, 0,65, +,+, 431455 Simple_repeat Simple_repeat 597 chr33 1635441 1635536 (G)n 753 + 1635441 1635536 0 2 26,28, 0,67, +,+, 431462 Simple_repeat Simple_repeat 597 chr33 1635771 1635866 G-rich 675 + 1635771 1635866 0 2 36,30, 0,65, +,+, 431464 Low_complexity Low_complexity 585 chr33_NT_463451v1_random 18524 21049 CR1-X2 485 + 18524 21049 0 2 178,180, 0,2345, +,+, 431497 LINE CR1 585 chr33_NT_463451v1_random 26243 26849 CR1-G 602 + 26243 26849 0 2 128,429, 0,177, +,+, 431503 LINE CR1 585 chr33_NT_463451v1_random 45591 46425 CR1-Y2_Aves 185 - 45591 46425 0 2 227,580, 0,254, -,-, 431520 LINE CR1 585 chr33_NT_463451v1_random 63030 63872 CR1-Y2_Aves 289 - 63030 63872 0 2 335,464, 0,378, -,-, 431530 LINE CR1 585 chr33_NT_463451v1_random 75843 76696 CR1-Y2_Aves 267 + 75843 76696 0 3 241,173,378, 0,259,475, +,+,+, 431536 LINE CR1 585 chr33_NT_463451v1_random 97825 98503 CR1-Y2_Aves 254 - 97825 98503 0 2 387,291, 0,387, -,-, 431554 LINE CR1 585 chr33_NT_463451v1_random 111465 112143 CR1-Y2_Aves 254 - 111465 112143 0 2 387,291, 0,387, -,-, 431564 LINE CR1 585 chr33_NT_463451v1_random 129332 129913 CR1-X2 579 - 129332 129913 0 2 183,398, 0,183, -,-, 431580 LINE CR1 586 chr33_NT_463451v1_random 143859 144285 CR1-Y2_Aves 278 + 143859 144285 0 2 241,167, 0,259, +,+, 431588 LINE CR1 586 chr33_NT_463451v1_random 168429 169529 CR1-Y2_Aves 279 - 168429 169529 0 2 563,499, 0,601, -,-, 431614 LINE CR1 586 chr33_NT_463451v1_random 206280 206604 GGERV10_LTR 661 + 206280 206604 0 2 62,160, 0,164, +,+, 431644 LTR ERVL 586 chr33_NT_463451v1_random 213424 213749 GGERV10_LTR 635 - 213424 213749 0 2 160,62, 0,263, -,-, 431648 LTR ERVL 586 chr33_NT_463451v1_random 221189 221900 CR1-Y2_Aves 217 + 221189 221900 0 2 338,373, 0,338, +,+, 431652 LINE CR1 586 chr33_NT_463451v1_random 230687 234729 CR1-Y2_Aves 223 - 230687 234729 0 2 583,423, 0,3619, -,-, 431658 LINE CR1 586 chr33_NT_463451v1_random 231457 233894 CR1-C3 482 - 231457 233894 0 2 1207,524, 0,1913, -,-, 431659 LINE CR1 586 chr33_NT_463451v1_random 234861 235726 CR1-X2 512 - 234861 235726 0 2 403,327, 0,538, -,-, 431661 LINE CR1 586 chr33_NT_463451v1_random 241335 245786 CR1-Y2_Aves 329 - 241335 245786 0 3 583,565,298, 0,3587,4153, -,-,-, 431664 LINE CR1 586 chr33_NT_463451v1_random 242104 244545 CR1-C3 483 - 242104 244545 0 2 1206,528, 0,1913, -,-, 431665 LINE CR1 587 chr33_NT_463451v1_random 284458 285213 CR1-Y2_Aves 272 - 284458 285213 0 2 232,479, 0,276, -,-, 431693 LINE CR1 587 chr33_NT_463451v1_random 289000 291268 GGERVL-C-int 734 + 289000 291268 0 4 1824,91,243,52, 0,1879,1970,2216, +,+,+,+, 431697 LTR ERVL 587 chr33_NT_463451v1_random 316069 319711 GGERV28_I-int 148 + 316069 319711 0 3 675,376,1994, 0,957,1648, +,+,+, 431722 LTR ERVK 587 chr33_NT_463451v1_random 319949 321833 GGLTR7-int 773 + 319949 321833 0 4 213,265,329,1055, 0,235,500,829, +,+,+,+, 431723 LTR ERV1 587 chr33_NT_463451v1_random 323514 324380 GGLTR10D-int 888 + 323514 324380 0 2 497,366, 0,500, +,+, 431725 LTR ERVK 587 chr33_NT_463451v1_random 336396 336977 CR1-X2 556 - 336396 336977 0 2 183,398, 0,183, -,-, 431735 LINE CR1 587 chr33_NT_463451v1_random 341014 341260 Z-REP 258 + 341014 341260 0 2 20,18, 0,228, +,+, 431737 Satellite macro 587 chr33_NT_463451v1_random 358020 359542 CR1-Y2_Aves 258 + 358020 359542 0 3 530,567,159, 0,531,1363, +,+,+, 431751 LINE CR1 587 chr33_NT_463451v1_random 361836 362891 CR1-X2 370 - 361836 362891 0 2 186,869, 0,186, -,-, 431753 LINE CR1 587 chr33_NT_463451v1_random 386897 386961 (AATAA)n 502 + 386897 386961 0 2 9,13, 0,51, +,+, 431772 Simple_repeat Simple_repeat 588 chr33_NT_463451v1_random 429136 429853 CR1-Y2_Aves 240 - 429136 429853 0 2 388,308, 0,409, -,-, 431810 LINE CR1 588 chr33_NT_463451v1_random 447358 448194 CR1-Y2_Aves 196 + 447358 448194 0 2 587,242, 0,594, +,+, 431816 LINE CR1 588 chr33_NT_463451v1_random 469928 470253 GGERV10_LTR 693 + 469928 470253 0 2 62,158, 0,167, +,+, 431833 LTR ERVL 588 chr33_NT_463451v1_random 485927 488216 GGERVL-C-int 735 - 485927 488216 0 4 52,243,91,1839, 0,55,298,450, -,-,-,-, 431847 LTR ERVL 588 chr33_NT_463451v1_random 501187 502053 CR1-Y2_Aves 367 - 501187 502053 0 2 565,298, 0,568, -,-, 431857 LINE CR1 588 chr33_NT_463451v1_random 510041 510623 CR1-X2 547 - 510041 510623 0 2 183,399, 0,183, -,-, 431863 LINE CR1 588 chr33_NT_463451v1_random 519566 520456 CR1-Y2_Aves 283 - 519566 520456 0 2 239,636, 0,254, -,-, 431869 LINE CR1 589 chr33_NT_463451v1_random 525940 529985 CR1-C3 391 - 525940 529985 0 3 1207,493,1226, 0,1912,2819, -,-,-, 431873 LINE CR1 589 chr33_NT_463451v1_random 534720 535045 GGERV10_LTR 605 + 534720 535045 0 2 74,160, 0,165, +,+, 431877 LTR ERVL 589 chr33_NT_463451v1_random 579145 579466 GGERV10_LTR 702 + 579145 579466 0 2 62,145, 0,176, +,+, 431911 LTR ERVL 589 chr33_NT_463451v1_random 584412 585163 CR1-Y2_Aves 242 + 584412 585163 0 2 341,395, 0,356, +,+, 431917 LINE CR1 589 chr33_NT_463451v1_random 604209 605065 CR1-Y2_Aves 262 + 604209 605065 0 3 241,173,381, 0,259,475, +,+,+, 431932 LINE CR1 589 chr33_NT_463451v1_random 628384 630738 GGERVL-B-int 775 - 628384 630738 0 4 567,91,842,819, 0,567,693,1535, -,-,-,-, 431954 LTR ERVL 589 chr33_NT_463451v1_random 639507 640185 CR1-Y2_Aves 254 - 639507 640185 0 2 387,291, 0,387, -,-, 431961 LINE CR1 589 chr33_NT_463451v1_random 649825 650501 CR1-Y2_Aves 265 - 649825 650501 0 2 351,304, 0,372, -,-, 431971 LINE CR1 590 chr33_NT_463451v1_random 661909 662649 CR1-Y2_Aves 292 + 661909 662649 0 2 478,225, 0,515, +,+, 431980 LINE CR1 590 chr33_NT_463451v1_random 672190 674445 GGLTR3E2 742 - 672190 674445 0 3 52,243,1957, 0,55,298, -,-,-, 431989 LTR ERVL 590 chr33_NT_463451v1_random 678226 678969 CR1-Y2_Aves 315 + 678226 678969 0 2 478,242, 0,501, +,+, 431992 LINE CR1 590 chr33_NT_463451v1_random 693249 693755 GGLTR3F2 614 + 693249 693755 0 2 228,221, 0,285, +,+, 432003 LTR ERVL 590 chr33_NT_463451v1_random 705813 706504 CR1-Y2_Aves 325 + 705813 706504 0 3 169,65,388, 0,217,303, +,+,+, 432015 LINE CR1 590 chr33_NT_463451v1_random 719676 720357 CR1-Y2_Aves 231 + 719676 720357 0 2 308,373, 0,308, +,+, 432024 LINE CR1 590 chr33_NT_463451v1_random 722950 723508 CR1-X2 457 - 722950 723508 0 2 191,367, 0,191, -,-, 432030 LINE CR1 590 chr33_NT_463451v1_random 734217 739674 CR1-Y2_Aves 261 + 734217 739674 0 3 336,374,221, 0,4824,5236, +,+,+, 432036 LINE CR1 590 chr33_NT_463451v1_random 778439 779144 CR1-Y2_Aves 256 + 778439 779144 0 2 238,401, 0,304, +,+, 432069 LINE CR1 591 chr33_NT_463451v1_random 796877 797432 CR1-F 535 + 796877 797432 0 2 394,161, 0,394, +,+, 432081 LINE CR1 591 chr33_NT_463451v1_random 800571 801151 CR1-X2 536 - 800571 801151 0 2 186,394, 0,186, -,-, 432085 LINE CR1 591 chr33_NT_463451v1_random 811514 813811 GGERVL-C-int 722 + 811514 813811 0 4 1829,91,243,52, 0,1908,1999,2245, +,+,+,+, 432094 LTR ERVL 591 chr33_NT_463451v1_random 821207 821930 CR1-Y2_Aves 236 - 821207 821930 0 2 387,336, 0,387, -,-, 432103 LINE CR1 591 chr33_NT_463451v1_random 835813 835879 (A)n 1000 + 835813 835879 0 2 19,17, 0,49, +,+, 432114 Simple_repeat Simple_repeat 591 chr33_NT_463451v1_random 849991 852060 GGERVL-C-int 719 - 849991 852060 0 5 52,243,91,805,823, 0,52,295,441,1246, -,-,-,-,-, 432123 LTR ERVL 591 chr33_NT_463451v1_random 872090 875947 CR1-F 922 - 872090 875947 0 2 1281,2212, 0,1645, -,-, 432138 LINE CR1 591 chr33_NT_463451v1_random 885237 886071 CR1-Y2_Aves 211 + 885237 886071 0 2 529,221, 0,613, +,+, 432146 LINE CR1 591 chr33_NT_463451v1_random 899797 900634 CR1-Y2_Aves 273 + 899797 900634 0 3 190,375,242, 0,201,595, +,+,+, 432155 LINE CR1 592 chr33_NT_463451v1_random 925656 926367 CR1-Y2_Aves 245 + 925656 926367 0 2 302,388, 0,323, +,+, 432176 LINE CR1 592 chr33_NT_463451v1_random 948430 949501 CR1-Y2_Aves 245 + 948430 949501 0 2 479,548, 0,523, +,+, 432186 LINE CR1 592 chr33_NT_463451v1_random 951955 953104 CR1-X2 475 - 951955 953104 0 2 186,963, 0,186, -,-, 432189 LINE CR1 592 chr33_NT_463451v1_random 966799 967635 CR1-Y2_Aves 220 + 966799 967635 0 2 190,635, 0,201, +,+, 432197 LINE CR1 592 chr33_NT_463451v1_random 979683 980759 CR1-Y2_Aves 222 - 979683 980759 0 2 519,514, 0,562, -,-, 432207 LINE CR1 592 chr33_NT_463451v1_random 984922 985774 GGLTR7-int 747 - 984922 985774 0 3 346,271,213, 0,346,639, -,-,-, 432208 LTR ERV1 592 chr33_NT_463451v1_random 986012 989765 GGERV28_I-int 73 - 986012 989765 0 2 1994,1444, 0,2309, -,-, 432209 LTR ERVK 592 chr33_NT_463451v1_random 1011307 1012342 CR1-Y2_Aves 279 + 1011307 1012342 0 2 469,565, 0,470, +,+, 432223 LINE CR1 592 chr33_NT_463451v1_random 1034329 1034675 CR1-X2 464 - 1034329 1034675 0 2 124,217, 0,129, -,-, 432239 LINE CR1 592 chr33_NT_463451v1_random 1045129 1045902 CR1-Y2_Aves 232 + 1045129 1045902 0 2 479,250, 0,523, +,+, 432247 LINE CR1 593 chr33_NT_463451v1_random 1062301 1063138 CR1-Y2_Aves 255 + 1062301 1063138 0 3 190,378,227, 0,205,610, +,+,+, 432260 LINE CR1 593 chr33_NT_463451v1_random 1078073 1078773 CR1-Y2_Aves 298 + 1078073 1078773 0 2 203,388, 0,312, +,+, 432268 LINE CR1 593 chr33_NT_463451v1_random 1081329 1082481 CR1-X2 492 - 1081329 1082481 0 2 183,969, 0,183, -,-, 432273 LINE CR1 593 chr33_NT_463451v1_random 1089023 1089346 GGERV10_LTR 644 + 1089023 1089346 0 2 62,159, 0,164, +,+, 432278 LTR ERVL 593 chr33_NT_463451v1_random 1102567 1103406 CR1-Y2_Aves 265 + 1102567 1103406 0 3 190,385,242, 0,205,597, +,+,+, 432288 LINE CR1 593 chr33_NT_463451v1_random 1122772 1127512 CR1-E 223 - 1122772 1127512 0 2 424,575, 0,4165, -,-, 432302 LINE CR1 593 chr33_NT_463451v1_random 1135928 1136767 CR1-Y2_Aves 263 - 1135928 1136767 0 3 239,384,190, 0,254,649, -,-,-, 432314 LINE CR1 593 chr33_NT_463451v1_random 1157019 1157885 CR1-Y2_Aves 350 - 1157019 1157885 0 2 567,298, 0,568, -,-, 432326 LINE CR1 593 chr33_NT_463451v1_random 1178106 1178272 Z-REP 643 + 1178106 1178272 0 2 73,48, 0,118, +,+, 432333 Satellite macro 74 chr33_NT_463451v1_random 1178280 1181715 GGLTR10D 917 + 1178280 1181715 0 3 364,2727,344, 0,364,3091, +,+,+, 432334 LTR ERVK 594 chr33_NT_463451v1_random 1227046 1228195 CR1-X2 489 - 1227046 1228195 0 2 186,963, 0,186, -,-, 432362 LINE CR1 594 chr33_NT_463451v1_random 1239234 1240785 CR1-Y2_Aves 266 + 1239234 1240785 0 2 1129,159, 0,1392, +,+, 432370 LINE CR1 594 chr33_NT_463451v1_random 1243080 1244237 CR1-X2 481 - 1243080 1244237 0 2 186,971, 0,186, -,-, 432373 LINE CR1 585 chr33_NT_463452v1_random 11203 11666 GGLTR3G1 633 + 11203 11666 0 2 410,46, 0,417, +,+, 432402 LTR ERVL 585 chr33_NT_463452v1_random 13792 14331 GGLTR3D 755 - 13792 14331 0 2 293,193, 0,346, -,-, 432404 LTR ERVL 585 chr33_NT_463452v1_random 16074 16540 CR1-F2 548 + 16074 16540 0 2 61,405, 0,61, +,+, 432410 LINE CR1 585 chr33_NT_463452v1_random 18024 18935 CR1-C3 577 + 18024 18935 0 2 125,71, 0,840, +,+, 432413 LINE CR1 585 chr33_NT_463452v1_random 19174 22699 GGLTR7-int 417 + 19174 22699 0 3 136,243,249, 0,429,3276, +,+,+, 432417 LTR ERV1 585 chr33_NT_463452v1_random 44395 44697 CR1-C4 442 + 44395 44697 0 2 74,198, 0,104, +,+, 432434 LINE CR1 585 chr33_NT_463452v1_random 49106 50320 Char12Mar1_GG 572 - 49106 50320 0 2 616,506, 0,708, -,-, 432438 DNA hAT-Charlie 585 chr33_NT_463452v1_random 57297 57796 GGLTR3F2 646 + 57297 57796 0 2 230,224, 0,275, +,+, 432444 LTR ERVL 585 chr33_NT_463452v1_random 61277 64751 GGERVL-B-int 795 + 61277 64751 0 3 493,949,2005, 0,495,1469, +,+,+, 432446 LTR ERVL 585 chr33_NT_463452v1_random 73937 74788 CR1-C4 416 - 73937 74788 0 2 156,695, 0,156, -,-, 432453 LINE CR1 585 chr33_NT_463452v1_random 74822 79966 CR1-Y2_Aves 278 - 74822 79966 0 3 596,571,536, 0,4033,4608, -,-,-, 432454 LINE CR1 585 chr33_NT_463452v1_random 75619 77224 CR1-C3 717 - 75619 77224 0 2 1142,86, 0,1519, -,-, 432455 LINE CR1 585 chr33_NT_463452v1_random 117100 118207 CR1-Y2_Aves 271 - 117100 118207 0 2 560,492, 0,615, -,-, 432489 LINE CR1 585 chr33_NT_463452v1_random 127088 127174 (AACAA)n 404 + 127088 127174 0 2 18,19, 0,67, +,+, 432490 Simple_repeat Simple_repeat 585 chr33_NT_463453v1_random 4889 6252 GGERV28_I-int 167 - 4889 6252 0 3 388,173,504, 0,415,859, -,-,-, 432506 LTR ERVK 585 chr33_NT_463453v1_random 37328 38162 CR1-Y2_Aves 289 - 37328 38162 0 3 242,384,190, 0,249,644, -,-,-, 432526 LINE CR1 585 chr33_NT_463453v1_random 41175 41321 Z-REP 709 + 41175 41321 0 2 53,48, 0,98, +,+, 432528 Satellite macro 585 chr33_NT_463453v1_random 41329 44742 GGLTR10D 905 + 41329 44742 0 3 364,2705,344, 0,364,3069, +,+,+, 432529 LTR ERVK 585 chr33_NT_463453v1_random 48964 49829 CR1-Y2_Aves 380 - 48964 49829 0 2 565,297, 0,568, -,-, 432535 LINE CR1 585 chr33_NT_463453v1_random 93025 93858 CR1-Y2_Aves 226 - 93025 93858 0 2 226,580, 0,253, -,-, 432568 LINE CR1 585 chr33_NT_463454v1_random 1762 1833 (CCCCCAG)n 436 + 1762 1833 0 2 7,12, 0,59, +,+, 432571 Simple_repeat Simple_repeat 585 chr33_NT_463454v1_random 21307 21366 (CACACCCC)n 400 + 21307 21366 0 2 22,6, 0,53, +,+, 432608 Simple_repeat Simple_repeat 585 chr33_NT_463454v1_random 33593 33727 G-rich 568 + 33593 33727 0 2 34,41, 0,93, +,+, 432642 Low_complexity Low_complexity 585 chr33_NT_463454v1_random 36402 37129 (GCATG)n 387 + 36402 37129 0 3 183,298,18, 0,213,709, +,+,+, 432648 Simple_repeat Simple_repeat 585 chr33_NT_463455v1_random 35029 36090 CR1-X2 497 + 35029 36090 0 3 764,112,176, 0,773,885, +,+,+, 432779 LINE CR1 585 chr33_NT_463455v1_random 70269 71422 CR1-X2 477 - 70269 71422 0 2 178,975, 0,178, -,-, 432809 LINE CR1 585 chr33_NT_463455v1_random 76116 77317 Char12Mar1_GG 598 - 76116 77317 0 2 617,493, 0,708, -,-, 432812 DNA hAT-Charlie 585 chr33_NT_463457v1_random 25297 26133 CR1-Y2_Aves 276 + 25297 26133 0 3 190,381,239, 0,201,597, +,+,+, 432896 LINE CR1 585 chr33_NT_463457v1_random 39528 40687 CR1-X2 497 - 39528 40687 0 2 181,978, 0,181, -,-, 432906 LINE CR1 585 chr33_NT_463457v1_random 44759 45079 Z-REP 338 + 44759 45079 0 2 73,202, 0,118, +,+, 432910 Satellite macro 585 chr33_NT_463457v1_random 54483 55542 CR1-Y2_Aves 272 + 54483 55542 0 2 464,541, 0,518, +,+, 432917 LINE CR1 585 chr33_NT_463458v1_random 5910 6219 CR1-X2 388 + 5910 6219 0 2 99,198, 0,111, +,+, 432928 LINE CR1 585 chr33_NT_463458v1_random 26636 27912 CR1-X2 566 + 26636 27912 0 2 173,61, 0,1215, +,+, 432939 LINE CR1 585 chr33_NT_463458v1_random 57453 57570 G-rich 618 + 57453 57570 0 2 33,33, 0,84, +,+, 432954 Low_complexity Low_complexity 585 chr33_NT_463459v1_random 4459 7073 GGLTR7-int 845 - 4459 7073 0 3 1790,210,614, 0,1790,2000, -,-,-, 432962 LTR ERV1 585 chr33_NT_463459v1_random 14229 20055 GGERV10_LTR 990 + 14229 20055 0 3 220,5385,220, 0,221,5606, +,+,+, 432971 LTR ERVL 585 chr33_NT_463460v1_random 31899 31998 CR1-E 712 - 31899 31998 0 2 48,51, 0,48, -,-, 433041 LINE CR1 585 chr33_NT_463461v1_random 6595 7958 GGERV28_I-int 167 + 6595 7958 0 3 504,173,388, 0,775,975, +,+,+, 433046 LTR ERVK 585 chr33_NT_463461v1_random 10026 11174 CR1-X2 487 + 10026 11174 0 2 969,179, 0,969, +,+, 433049 LINE CR1 585 chr33_NT_463461v1_random 26389 28644 GGLTR3E2 746 - 26389 28644 0 3 52,243,1957, 0,55,298, -,-,-, 433058 LTR ERVL 585 chr33_NT_463462v1_random 9034 9517 GGLTR3F2 776 + 9034 9517 0 2 399,56, 0,427, +,+, 433068 LTR ERVL 585 chr33_NT_463463v1_random 7789 8653 CR1-Y2_Aves 353 - 7789 8653 0 2 565,298, 0,566, -,-, 433075 LINE CR1 585 chr3_NT_459020v1_random 93154 93592 CR1-Y2_Aves 353 + 93154 93592 0 2 118,175, 0,263, +,+, 433139 LINE CR1 585 chr3_NT_459021v1_random 47108 47696 CR1-Y4 507 + 47108 47696 0 2 19,242, 0,346, +,+, 433227 LINE CR1 585 chr3_NT_459022v1_random 23262 35238 CR1-C 484 + 23262 35238 0 5 137,137,137,137,137, 0,2960,5920,8880,11839, +,+,+,+,+, 433235 LINE CR1 585 chr3_NT_459023v1_random 5371 6920 Char12Mar1_GG 572 - 5371 6920 0 2 518,53, 0,1496, -,-, 433244 DNA hAT-Charlie 585 chr3_NT_459024v1_random 26923 29211 CR1-C2 583 - 26923 29211 0 2 1906,275, 0,2013, -,-, 433263 LINE CR1 585 chr3_NT_459025v1_random 12641 14202 GGLTR3F1 851 - 12641 14202 0 4 115,863,349,123, 0,115,979,1438, -,-,-,-, 433274 LTR ERVL 585 chr3_NT_459025v1_random 13953 14114 GGERVL-B-int 851 + 13953 14114 0 2 43,118, 0,43, +,+, 433275 LTR ERVL 585 chr3_NT_459025v1_random 21765 22064 GGLTR3E1 727 - 21765 22064 0 2 138,161, 0,138, -,-, 433283 LTR ERVL 585 chr3_NT_459025v1_random 24263 26300 GGERVK1-int 839 + 24263 26300 0 3 240,918,776, 0,240,1261, +,+,+, 433286 LTR ERVK 585 chr3_NT_459026v1_random 8904 10001 GGERVL-A-int 81 + 8904 10001 0 2 394,434, 0,663, +,+, 433295 LTR ERVL 585 chr3_NT_459028v1_random 607 1556 CR1-F 784 - 607 1556 0 2 401,508, 0,441, -,-, 433326 LINE CR1 585 chr3_NT_459031v1_random 10470 12083 CR1-G 544 + 10470 12083 0 3 593,125,306, 0,869,1307, +,+,+, 433391 LINE CR1 585 chr3_NT_459033v1_random 15749 16810 CR1-D2 658 + 15749 16810 0 2 551,510, 0,551, +,+, 433424 LINE CR1 585 chr3_NT_459033v1_random 19290 19919 GGLTR8A 535 + 19290 19919 0 2 321,178, 0,451, +,+, 433427 LTR ERVL 585 chr3_NT_459035v1_random 130 1055 CR1-Y2_Aves 317 + 130 1055 0 2 472,453, 0,472, +,+, 433433 LINE CR1 585 chr3_NT_459037v1_random 2728 3605 CR1-D 288 + 2728 3605 0 2 667,191, 0,686, +,+, 433454 LINE CR1 585 chr3_NT_459041v1_random 676 1014 CR1-X1 313 - 676 1014 0 2 22,316, 0,22, -,-, 433518 LINE CR1 585 chr3_NT_459041v1_random 14980 15401 Char12Mar1_GG 511 - 14980 15401 0 3 123,178,120, 0,123,301, -,-,-, 433528 DNA hAT-Charlie 585 chr3_NT_459045v1_random 7935 9044 CR1-Y4 607 - 7935 9044 0 2 766,343, 0,766, -,-, 433560 LINE CR1 585 chr3_NT_459046v1_random 1544 2177 Sat-CR1_GG 274 + 1544 2177 0 2 214,299, 0,334, +,+, 433565 Satellite Satellite 585 chr3_NT_459046v1_random 15977 16622 Sat-CR1_GG 182 + 15977 16622 0 2 68,431, 0,214, +,+, 433591 Satellite Satellite 585 chr3_NT_459046v1_random 18964 19533 CR1-C4 576 - 18964 19533 0 2 401,168, 0,401, -,-, 433597 LINE CR1 585 chr3_NT_459055v1_random 4662 7206 CR1-Y 537 + 4662 7206 0 2 911,1593, 0,951, +,+, 433661 LINE CR1 585 chr3_NT_459055v1_random 7204 8824 CR1-C3 597 + 7204 8824 0 2 431,268, 0,1352, +,+, 433663 LINE CR1 585 chr3_NT_459055v1_random 7633 8550 CR1-H 824 - 7633 8550 0 2 412,463, 0,454, -,-, 433664 LINE CR1 585 chr3_NT_459055v1_random 14630 15002 UCON29 267 - 14630 15002 0 2 106,179, 0,193, -,-, 433668 DNA Kolobok 585 chr3_NT_459055v1_random 16690 17164 CR1-Y1_Aves 470 + 16690 17164 0 2 295,179, 0,295, +,+, 433672 LINE CR1 585 chr3_NT_459063v1_random 13344 13849 CR1-Y2_Aves 297 + 13344 13849 0 2 110,392, 0,113, +,+, 433753 LINE CR1 585 chr3_NT_459067v1_random 760 1361 CR1-D 480 + 760 1361 0 2 275,326, 0,275, +,+, 433781 LINE CR1 585 chr3_NT_459067v1_random 4178 8746 CR1-F2 440 + 4178 8746 0 2 89,231, 0,4337, +,+, 433784 LINE CR1 585 chr3_NT_459068v1_random 5631 8995 GGLTR5A 374 - 5631 8995 0 2 191,292, 0,3072, -,-, 433794 LTR ERVL 585 chr3_NT_459068v1_random 12922 13642 CR1-F 246 + 12922 13642 0 2 175,545, 0,175, +,+, 433800 LINE CR1 585 chr3_NT_459069v1_random 2138 2394 GGLTR5A 468 + 2138 2394 0 2 40,150, 0,106, +,+, 433803 LTR ERVL 585 chr3_NT_459072v1_random 8826 9588 CR1-D 456 + 8826 9588 0 2 563,199, 0,563, +,+, 433842 LINE CR1 585 chr3_NT_459073v1_random 13347 13946 CR1-Y2_Aves 73 - 13347 13946 0 2 510,89, 0,510, -,-, 433860 LINE CR1 585 chr3_NT_459076v1_random 5625 10246 CR1-F2 369 + 5625 10246 0 3 419,431,641, 0,2381,3980, +,+,+, 433890 LINE CR1 585 chr3_NT_459077v1_random 9569 10281 CR1-D2 611 - 9569 10281 0 2 300,412, 0,300, -,-, 433898 LINE CR1 585 chr3_NT_459079v1_random 3561 3621 (AT)n 678 + 3561 3621 0 2 21,6, 0,54, +,+, 433908 Simple_repeat Simple_repeat 585 chr3_NT_459080v1_random 5480 7090 CR1-Y 344 + 5480 7090 0 2 262,1269, 0,341, +,+, 433923 LINE CR1 585 chr3_NT_459080v1_random 10592 12843 CR1-Y2_Aves 319 + 10592 12843 0 2 1257,228, 0,2023, +,+, 433928 LINE CR1 585 chr3_NT_459086v1_random 5345 5806 CR1-Y2_Aves 198 - 5345 5806 0 2 231,117, 0,344, -,-, 433961 LINE CR1 585 chr3_NT_459087v1_random 10204 10377 CR1-X2 538 + 10204 10377 0 2 41,119, 0,54, +,+, 433982 LINE CR1 585 chr3_NT_459088v1_random 10071 11341 CR1-E 581 - 10071 11341 0 2 706,289, 0,981, -,-, 433993 LINE CR1 585 chr3_NT_459094v1_random 5710 6171 CR1-Y 555 - 5710 6171 0 2 239,140, 0,321, -,-, 434044 LINE CR1 585 chr3_NT_459096v1_random 2220 2651 CR1-F2 459 + 2220 2651 0 2 164,262, 0,169, +,+, 434069 LINE CR1 585 chr3_NT_459096v1_random 3485 3721 CR1-Y1_Aves 440 - 3485 3721 0 2 93,108, 0,128, -,-, 434070 LINE CR1 585 chr3_NT_459098v1_random 1092 1404 GGLTR11 559 + 1092 1404 0 2 62,212, 0,100, +,+, 434087 LTR ERV1 585 chr3_NT_459109v1_random 5146 5518 GGERVK10-int 292 - 5146 5518 0 2 86,141, 0,231, -,-, 434185 LTR ERVK 585 chr3_NT_459114v1_random 3179 4394 GGXHOI 413 - 3179 4394 0 2 476,718, 0,497, -,-, 434223 Satellite W-chromosome 585 chr3_NT_459114v1_random 5958 7898 GGXHOI 407 - 5958 7898 0 4 439,267,449,705, 0,456,745,1235, -,-,-,-, 434226 Satellite W-chromosome 585 chr3_NT_459119v1_random 4722 8716 CR1-G 711 + 4722 8716 0 4 824,1284,995,867, 0,848,2132,3127, +,+,+,+, 434264 LINE CR1 585 chr3_NT_459125v1_random 5086 7664 CR1-Y2_Aves 379 + 5086 7664 0 3 186,1241,228, 0,341,2350, +,+,+, 434303 LINE CR1 585 chr3_NT_459125v1_random 9821 11493 CR1-F0 382 + 9821 11493 0 2 188,1329, 0,343, +,+, 434307 LINE CR1 585 chr3_NT_459129v1_random 8801 11205 CR1-C4 424 + 8801 11205 0 2 57,586, 0,1818, +,+, 434325 LINE CR1 585 chr3_NT_459131v1_random 2327 3261 CR1-B2 540 + 2327 3261 0 2 607,166, 0,768, +,+, 434334 LINE CR1 585 chr3_NT_459136v1_random 2776 3557 CR1-C 746 + 2776 3557 0 2 361,390, 0,391, +,+, 434361 LINE CR1 585 chr3_NT_459136v1_random 6376 6665 CR1-G 871 + 6376 6665 0 2 80,209, 0,80, +,+, 434366 LINE CR1 585 chr3_NT_459136v1_random 6456 7727 CR1-F0 241 + 6456 7727 0 2 37,180, 0,1091, +,+, 434367 LINE CR1 585 chr3_NT_459138v1_random 3621 4493 CR1-Y1_Aves 513 - 3621 4493 0 2 108,421, 0,451, -,-, 434379 LINE CR1 585 chr3_NT_459141v1_random 7123 8732 CR1-Y 340 + 7123 8732 0 2 273,1268, 0,341, +,+, 434401 LINE CR1 585 chr3_NT_459145v1_random 4319 10756 CR1-F2 480 + 4319 10756 0 2 172,1148, 0,5289, +,+, 434425 LINE CR1 585 chr3_NT_459145v1_random 4899 6882 CR1-Y 347 + 4899 6882 0 2 998,230, 0,1753, +,+, 434427 LINE CR1 585 chr3_NT_459150v1_random 6325 6655 GGLTR5B 692 - 6325 6655 0 2 227,103, 0,227, -,-, 434470 LTR ERVL 585 chr3_NT_459156v1_random 2965 3458 Char12Mar1_GG 642 - 2965 3458 0 2 106,335, 0,158, -,-, 434507 DNA hAT-Charlie 585 chr3_NT_459164v1_random 8831 9207 CR1-D2 647 - 8831 9207 0 2 213,163, 0,213, -,-, 434576 LINE CR1 585 chr3_NT_459168v1_random 1962 2316 CR1-Y4 533 + 1962 2316 0 2 263,91, 0,263, +,+, 434612 LINE CR1 585 chr3_NT_459169v1_random 5553 9092 CR1-F2 515 + 5553 9092 0 2 114,58, 0,3481, +,+, 434622 LINE CR1 585 chr3_NT_459178v1_random 5284 5418 CR1-C2 840 - 5284 5418 0 2 73,61, 0,73, -,-, 434671 LINE CR1 585 chr3_NT_459180v1_random 4856 5497 GGLTR5B 371 - 4856 5497 0 2 190,387, 0,254, -,-, 434682 LTR ERVL 585 chr3_NT_459183v1_random 4137 4563 TguLTR5e 415 - 4137 4563 0 2 109,223, 0,203, -,-, 434702 LTR ERVL 585 chr3_NT_459187v1_random 4993 7241 GGXHOI 414 - 4993 7241 0 3 912,417,841, 0,930,1407, -,-,-, 434731 Satellite W-chromosome 585 chr3_NT_459187v1_random 8454 9070 GGXHOI 394 - 8454 9070 0 2 269,329, 0,287, -,-, 434734 Satellite W-chromosome 585 chr3_NT_459193v1_random 8028 8455 GGLTR8B 347 + 8028 8455 0 2 287,85, 0,342, +,+, 434772 LTR ERVL 585 chr3_NT_459200v1_random 8949 9262 CR1-Y1_Aves 470 - 8949 9262 0 2 204,93, 0,220, -,-, 434823 LINE CR1 585 chr3_NT_459205v1_random 1532 1815 Mariner1b_GG 434 - 1532 1815 0 2 73,210, 0,73, -,-, 434854 DNA TcMar-Mariner 585 chr3_NT_459209v1_random 3694 5577 CR1-Y1_Aves 340 - 3694 5577 0 2 149,736, 0,1147, -,-, 434875 LINE CR1 585 chr3_NT_459225v1_random 8445 8519 (A)n 822 + 8445 8519 0 2 27,19, 0,55, +,+, 434935 Simple_repeat Simple_repeat 585 chr3_NT_459241v1_random 6296 6544 CR1-X2 527 - 6296 6544 0 2 129,119, 0,129, -,-, 435006 LINE CR1 585 chr3_NT_459255v1_random 1544 2005 GGLTR5A 446 - 1544 2005 0 2 107,305, 0,156, -,-, 435083 LTR ERVL 585 chr3_NT_459256v1_random 5927 6419 CR1-D 634 + 5927 6419 0 2 264,219, 0,273, +,+, 435094 LINE CR1 585 chr3_NT_459256v1_random 7662 8127 CR1-F 814 + 7662 8127 0 2 361,51, 0,414, +,+, 435097 LINE CR1 585 chr3_NT_459267v1_random 6457 6636 G-rich 386 + 6457 6636 0 2 56,74, 0,105, +,+, 435144 Low_complexity Low_complexity 585 chr3_NT_459281v1_random 6670 6773 (CTTT)n 316 + 6670 6773 0 2 49,27, 0,76, +,+, 435255 Simple_repeat Simple_repeat 585 chr3_NT_459290v1_random 531 815 CR1-Y3 513 + 531 815 0 2 148,81, 0,203, +,+, 435302 LINE CR1 585 chr3_NT_459298v1_random 2690 5466 GGXHOI 422 + 2690 5466 0 4 269,1068,1085,233, 0,286,1417,2543, +,+,+,+, 435345 Satellite W-chromosome 585 chr3_NT_459298v1_random 6024 7387 GGXHOI 384 + 6024 7387 0 2 696,644, 0,719, +,+, 435347 Satellite W-chromosome 585 chr3_NT_459302v1_random 363 1519 GGXHOI 405 - 363 1519 0 3 386,439,272, 0,404,884, -,-,-, 435365 Satellite W-chromosome 585 chr3_NT_459302v1_random 1614 2363 GGXHOI 403 - 1614 2363 0 3 159,268,292, 0,173,457, -,-,-, 435366 Satellite W-chromosome 585 chr3_NT_459302v1_random 4295 7290 GGXHOI 409 - 4295 7290 0 5 718,290,418,680,757, 0,736,1066,1502,2238, -,-,-,-,-, 435369 Satellite W-chromosome 585 chr3_NT_459305v1_random 6878 7333 CR1-C4 660 - 6878 7333 0 2 409,46, 0,409, -,-, 435387 LINE CR1 585 chr3_NT_459316v1_random 5877 6230 CR1-X1 644 - 5877 6230 0 2 308,45, 0,308, -,-, 435441 LINE CR1 585 chr3_NT_459333v1_random 3310 4501 CR1-F2 624 - 3310 4501 0 2 708,426, 0,765, -,-, 435505 LINE CR1 585 chr3_NT_459339v1_random 3583 4007 CR1-X1 345 - 3583 4007 0 2 75,290, 0,134, -,-, 435557 LINE CR1 585 chr3_NT_459342v1_random 4366 6759 GGXHOI 422 + 4366 6759 0 2 455,1880, 0,513, +,+, 435571 Satellite W-chromosome 585 chr3_NT_459372v1_random 4061 4142 (TATACA)n 394 + 4061 4142 0 2 27,8, 0,73, +,+, 435681 Simple_repeat Simple_repeat 585 chr3_NT_459377v1_random 5649 6205 CR1-X2 543 - 5649 6205 0 3 197,33,291, 0,197,265, -,-,-, 435703 LINE CR1 585 chr3_NT_459389v1_random 3582 4026 GGLTR8A 209 + 3582 4026 0 2 249,178, 0,266, +,+, 435742 LTR ERVL 585 chr3_NT_459392v1_random 3783 4073 CR1-D 770 - 3783 4073 0 2 47,185, 0,105, -,-, 435753 LINE CR1 585 chr3_NT_459404v1_random 4651 5076 GGLTR8B 391 + 4651 5076 0 2 264,85, 0,340, +,+, 435803 LTR ERVL 585 chr3_NT_459429v1_random 2666 2826 CR1-Y2_Aves 560 - 2666 2826 0 2 63,89, 0,71, -,-, 435886 LINE CR1 585 chr3_NT_459433v1_random 4026 4148 GGLTR10C1 889 + 4026 4148 0 2 61,61, 0,61, +,+, 435894 LTR ERVK 585 chr3_NT_459456v1_random 5265 5597 GGXHOI 342 - 5265 5597 0 2 156,154, 0,178, -,-, 435978 Satellite W-chromosome 585 chr3_NT_459470v1_random 2708 3814 CR1-C4 630 - 2708 3814 0 2 237,869, 0,237, -,-, 436019 LINE CR1 585 chr3_NT_459485v1_random 2279 2772 CR1-C4 616 - 2279 2772 0 2 101,329, 0,164, -,-, 436071 LINE CR1 585 chr3_NT_459487v1_random 1374 2402 GGXHOI 433 - 1374 2402 0 2 704,307, 0,721, -,-, 436082 Satellite W-chromosome 585 chr3_NT_459515v1_random 3542 3594 (CCTCT)n 536 + 3542 3594 0 2 8,10, 0,42, +,+, 436158 Simple_repeat Simple_repeat 585 chr3_NT_459534v1_random 813 1502 (CCCTAA)n 706 + 813 1502 0 3 206,19,57, 0,401,632, +,+,+, 436215 Simple_repeat Simple_repeat 585 chr3_NT_459534v1_random 3355 3687 GGERV10_LTR 652 - 3355 3687 0 2 160,64, 0,268, -,-, 436223 LTR ERVL 585 chr3_NT_459575v1_random 1009 1466 CR1-X1 597 - 1009 1466 0 2 317,139, 0,318, -,-, 436319 LINE CR1 585 chr3_NT_459585v1_random 1795 2098 CR1-F0 476 - 1795 2098 0 2 112,191, 0,112, -,-, 436351 LINE CR1 585 chr3_NT_459596v1_random 2055 3588 Char12Mar1_GG 557 - 2055 3588 0 2 514,53, 0,1480, -,-, 436377 DNA hAT-Charlie 585 chr3_NT_459604v1_random 2215 3868 GGXHOI 415 - 2215 3868 0 3 906,167,514, 0,943,1139, -,-,-, 436393 Satellite W-chromosome 585 chr3_NT_459634v1_random 1828 2098 GGXHOI 357 + 1828 2098 0 2 142,98, 0,172, +,+, 436488 Satellite W-chromosome 585 chr3_NT_459643v1_random 1757 2452 CR1-F2 510 + 1757 2452 0 2 397,158, 0,537, +,+, 436516 LINE CR1 585 chr3_NT_459643v1_random 2149 2291 CR1-F2 667 - 2149 2291 0 2 83,59, 0,83, -,-, 436517 LINE CR1 585 chr3_NT_459653v1_random 2499 3004 GGXHOI 411 - 2499 3004 0 2 302,147, 0,358, -,-, 436545 Satellite W-chromosome 585 chr3_NT_459703v1_random 1428 1827 (CTCCA)n 262 + 1428 1827 0 2 120,14, 0,385, +,+, 436642 Simple_repeat Simple_repeat 585 chr3_NT_459704v1_random 1309 2068 GGXHOI 408 + 1309 2068 0 2 267,475, 0,284, +,+, 436648 Satellite W-chromosome 585 chr3_NT_459708v1_random 1244 2115 GGXHOI 433 + 1244 2115 0 3 280,110,419, 0,304,452, +,+,+, 436658 Satellite W-chromosome 585 chr3_NT_459713v1_random 1193 2060 GGXHOI 328 + 1193 2060 0 2 696,140, 0,727, +,+, 436665 Satellite W-chromosome 585 chr3_NT_459769v1_random 251 631 (GGAA)n 878 + 251 631 0 2 181,182, 0,198, +,+, 436723 Simple_repeat Simple_repeat 585 chr4 12016 13974 CR1-C 557 + 12016 13974 0 2 408,824, 0,1134, +,+, 436798 LINE CR1 585 chr4 109181 110827 GGLTR4B 797 - 109181 110827 0 2 74,255, 0,1391, -,-, 436854 LTR ERVL 585 chr4 129717 130288 CR1-E 764 + 129717 130288 0 2 425,146, 0,425, +,+, 436870 LINE CR1 586 chr4 160677 162134 CR1-C4 503 - 160677 162134 0 3 787,170,256, 0,809,1201, -,-,-, 436883 LINE CR1 592 chr4 922908 922983 (T)n 875 + 922908 922983 0 2 31,44, 0,31, +,+, 437242 Simple_repeat Simple_repeat 593 chr4 1071783 1072141 CR1-F2 408 - 1071783 1072141 0 2 259,99, 0,259, -,-, 437318 LINE CR1 593 chr4 1150019 1150520 (TTCCCC)n 344 + 1150019 1150520 0 2 9,59, 0,442, +,+, 437373 Simple_repeat Simple_repeat 596 chr4 1497905 1498454 CR1-Y2_Aves 183 - 1497905 1498454 0 2 182,97, 0,452, -,-, 437501 LINE CR1 597 chr4 1658641 1659262 CR1-C4 340 - 1658641 1659262 0 2 387,97, 0,524, -,-, 437604 LINE CR1 599 chr4 1918381 1918732 CR1-X2 540 + 1918381 1918732 0 2 36,93, 0,258, +,+, 437762 LINE CR1 601 chr4 2167723 2171226 CR1-F0 528 - 2167723 2171226 0 2 62,123, 0,3380, -,-, 437879 LINE CR1 602 chr4 2244013 2248172 CR1-C4 561 - 2244013 2248172 0 3 72,67,503, 0,3589,3656, -,-,-, 437908 LINE CR1 602 chr4 2302207 2303249 CR1-F2 905 - 2302207 2303249 0 2 162,880, 0,162, -,-, 437927 LINE CR1 602 chr4 2316744 2317170 AmnSINE1 568 + 2316744 2317170 0 2 216,42, 0,384, +,+, 437931 SINE 5S-Deu-L2 605 chr4 2662333 2662866 CR1-F2 615 - 2662333 2662866 0 2 63,370, 0,163, -,-, 438082 LINE CR1 606 chr4 2843551 2845631 CR1-D2 523 + 2843551 2845631 0 2 195,80, 0,2000, +,+, 438171 LINE CR1 612 chr4 3608136 3608344 CR1-C4 272 + 3608136 3608344 0 2 104,59, 0,149, +,+, 438493 LINE CR1 612 chr4 3614842 3619273 CR1-F2 402 + 3614842 3619273 0 2 150,120, 0,4311, +,+, 438497 LINE CR1 613 chr4 3735077 3735864 CR1-L3A_Croc 186 - 3735077 3735864 0 2 484,198, 0,589, -,-, 438543 LINE CR1 613 chr4 3739351 3739512 CR1-X2 627 - 3739351 3739512 0 2 80,81, 0,80, -,-, 438546 LINE CR1 613 chr4 3747339 3750063 CR1-F2 420 - 3747339 3750063 0 2 80,141, 0,2583, -,-, 438550 LINE CR1 615 chr4 3974971 3975031 A-rich 486 + 3974971 3975031 0 2 16,16, 0,44, +,+, 438659 Low_complexity Low_complexity 618 chr4 4352766 4352842 (TTTCT)n 246 + 4352766 4352842 0 2 6,47, 0,29, +,+, 438800 Simple_repeat Simple_repeat 618 chr4 4362461 4363239 CR1-C3 537 + 4362461 4363239 0 2 67,632, 0,146, +,+, 438807 LINE CR1 618 chr4 4423591 4423778 Char12Mar1_GG 705 - 4423591 4423778 0 2 112,72, 0,115, -,-, 438835 DNA hAT-Charlie 619 chr4 4528326 4528818 CR1-F2 372 + 4528326 4528818 0 2 110,180, 0,312, +,+, 438878 LINE CR1 620 chr4 4621692 4624049 CR1-F2 608 + 4621692 4624049 0 2 134,142, 0,2215, +,+, 438936 LINE CR1 621 chr4 4771000 4771097 (TATATA)n 214 + 4771000 4771097 0 2 8,10, 0,87, +,+, 439001 Simple_repeat Simple_repeat 621 chr4 4781181 4782951 CR1-F2 439 + 4781181 4782951 0 2 136,119, 0,1651, +,+, 439006 LINE CR1 622 chr4 4931729 4931942 CR1-C4 562 + 4931729 4931942 0 2 94,80, 0,133, +,+, 439075 LINE CR1 623 chr4 5035819 5036517 CR1-C3 724 + 5035819 5036517 0 2 86,612, 0,86, +,+, 439123 LINE CR1 623 chr4 5058853 5058921 (GGCGGC)n 322 + 5058853 5058921 0 2 21,27, 0,41, +,+, 439131 Simple_repeat Simple_repeat 624 chr4 5239298 5240048 CR1-F2 510 + 5239298 5240048 0 2 105,630, 0,120, +,+, 439194 LINE CR1 626 chr4 5433306 5435765 CR1-C3 480 + 5433306 5435765 0 2 76,86, 0,2373, +,+, 439295 LINE CR1 627 chr4 5531178 5532567 CR1-C2 262 - 5531178 5532567 0 2 243,299, 0,1090, -,-, 439344 LINE CR1 627 chr4 5531425 5532291 CR1-F2 427 - 5531425 5532291 0 2 353,512, 0,354, -,-, 439345 LINE CR1 628 chr4 5654437 5654916 GGLTR8A 486 - 5654437 5654916 0 2 189,279, 0,200, -,-, 439395 LTR ERVL 628 chr4 5739437 5739829 CR1-F2 559 + 5739437 5739829 0 2 59,321, 0,71, +,+, 439444 LINE CR1 628 chr4 5747178 5747409 GGLTR10C1 708 - 5747178 5747409 0 2 150,81, 0,150, -,-, 439447 LTR ERVK 628 chr4 5763416 5763679 CR1-X2 497 - 5763416 5763679 0 2 94,70, 0,193, -,-, 439461 LINE CR1 629 chr4 5890161 5890877 CR1-F0 203 + 5890161 5890877 0 2 293,398, 0,318, +,+, 439533 LINE CR1 630 chr4 6001714 6001923 GGLTR4B 554 + 6001714 6001923 0 2 122,87, 0,122, +,+, 439590 LTR ERVL 631 chr4 6090126 6090517 TguLTR5e 479 + 6090126 6090517 0 2 155,236, 0,155, +,+, 439627 LTR ERVL 631 chr4 6110848 6111132 CR1-Y2_Aves 306 + 6110848 6111132 0 2 153,121, 0,163, +,+, 439636 LINE CR1 631 chr4 6133143 6133423 CR1-Y2_Aves 195 - 6133143 6133423 0 2 158,122, 0,158, -,-, 439651 LINE CR1 631 chr4 6147300 6147348 (TTTTCTT)n 464 + 6147300 6147348 0 2 14,9, 0,39, +,+, 439664 Simple_repeat Simple_repeat 632 chr4 6163044 6163133 (A)n 767 + 6163044 6163133 0 2 30,28, 0,61, +,+, 439675 Simple_repeat Simple_repeat 632 chr4 6202517 6203569 CR1-Y2_Aves 157 + 6202517 6203569 0 3 265,331,384, 0,306,668, +,+,+, 439692 LINE CR1 632 chr4 6219272 6219348 (TTGT)n 424 + 6219272 6219348 0 2 8,30, 0,46, +,+, 439704 Simple_repeat Simple_repeat 633 chr4 6390982 6391095 (AAC)n 354 + 6390982 6391095 0 2 35,30, 0,83, +,+, 439798 Simple_repeat Simple_repeat 633 chr4 6398686 6398774 GGLTR3D 842 - 6398686 6398774 0 2 44,44, 0,44, -,-, 439808 LTR ERVL 634 chr4 6468041 6468646 CR1-Y2_Aves 142 - 6468041 6468646 0 2 316,211, 0,394, -,-, 439844 LINE CR1 634 chr4 6478988 6479397 Char12Mar1_GG 622 - 6478988 6479397 0 2 120,289, 0,120, -,-, 439854 DNA hAT-Charlie 635 chr4 6560582 6561453 CR1-Y2_Aves 121 + 6560582 6561453 0 2 513,292, 0,579, +,+, 439905 LINE CR1 635 chr4 6625951 6626372 GGLTR3C1 590 + 6625951 6626372 0 2 344,77, 0,344, +,+, 439946 LTR ERVL 635 chr4 6650544 6651033 GGLTR3F2 852 + 6650544 6651033 0 2 229,209, 0,280, +,+, 439953 LTR ERVL 636 chr4 6702457 6705095 CR1-C4 595 - 6702457 6705095 0 2 779,1159, 0,1479, -,-, 439990 LINE CR1 638 chr4 6992966 6993043 (TTTG)n 494 + 6992966 6993043 0 2 18,26, 0,51, +,+, 440133 Simple_repeat Simple_repeat 643 chr4 7640471 7640759 CR1-Y1_Aves 452 + 7640471 7640759 0 2 120,84, 0,204, +,+, 440549 LINE CR1 643 chr4 7696566 7696881 GGLTR8B 318 - 7696566 7696881 0 2 167,129, 0,186, -,-, 440592 LTR ERVL 644 chr4 7771151 7774498 CR1-C 802 + 7771151 7774498 0 2 1091,2256, 0,1091, +,+, 440640 LINE CR1 644 chr4 7805365 7805811 CR1-F2 167 + 7805365 7805811 0 2 252,194, 0,252, +,+, 440654 LINE CR1 645 chr4 7865369 7866528 CR1-X2 525 + 7865369 7866528 0 2 206,374, 0,785, +,+, 440696 LINE CR1 645 chr4 7926052 7926673 CR1-E 565 + 7926052 7926673 0 2 156,464, 0,157, +,+, 440737 LINE CR1 647 chr4 8204788 8206081 Char12Mar1_GG 641 - 8204788 8206081 0 2 219,186, 0,1107, -,-, 440861 DNA hAT-Charlie 649 chr4 8437666 8439251 CR1-D2 602 - 8437666 8439251 0 2 1040,545, 0,1040, -,-, 440940 LINE CR1 649 chr4 8475351 8476362 CR1-D2 604 + 8475351 8476362 0 2 955,56, 0,955, +,+, 440949 LINE CR1 651 chr4 8777991 8778628 GGLTR8B 368 + 8777991 8778628 0 2 195,270, 0,367, +,+, 441054 LTR ERVL 652 chr4 8869253 8882385 Char12Mar1_GG 617 - 8869253 8882385 0 2 542,35, 0,13097, -,-, 441097 DNA hAT-Charlie 653 chr4 8986417 8992844 CR1-F0 343 - 8986417 8992844 0 2 93,163, 0,6264, -,-, 441147 LINE CR1 655 chr4 9192091 9192848 CR1-D2 636 - 9192091 9192848 0 2 330,427, 0,330, -,-, 441249 LINE CR1 655 chr4 9303900 9305734 CR1-H 778 - 9303900 9305734 0 2 1564,270, 0,1564, -,-, 441315 LINE CR1 659 chr4 9756267 9756372 (A)n 842 + 9756267 9756372 0 2 27,29, 0,76, +,+, 441522 Simple_repeat Simple_repeat 660 chr4 9871030 9871315 CR1-X1 539 + 9871030 9871315 0 2 213,65, 0,220, +,+, 441586 LINE CR1 661 chr4 9987538 9987970 Char12Mar1_GG 748 - 9987538 9987970 0 2 183,35, 0,397, -,-, 441654 DNA hAT-Charlie 661 chr4 10034511 10034595 (A)n 815 + 10034511 10034595 0 2 25,22, 0,62, +,+, 441694 Simple_repeat Simple_repeat 663 chr4 10315239 10315317 (TTTGTT)n 290 + 10315239 10315317 0 2 12,16, 0,62, +,+, 441823 Simple_repeat Simple_repeat 663 chr4 10322148 10322215 (TATAA)n 334 + 10322148 10322215 0 2 31,19, 0,48, +,+, 441828 Simple_repeat Simple_repeat 664 chr4 10444219 10445992 CR1-C 812 - 10444219 10445992 0 2 583,1161, 0,612, -,-, 441880 LINE CR1 664 chr4 10472360 10472939 GGLTR4A 448 + 10472360 10472939 0 2 283,79, 0,500, +,+, 441895 LTR ERVL 666 chr4 10703782 10704457 CR1-L3B_Croc 464 - 10703782 10704457 0 2 397,60, 0,615, -,-, 442020 LINE CR1 667 chr4 10768459 10768669 CR1-F2 592 + 10768459 10768669 0 2 66,144, 0,66, +,+, 442063 LINE CR1 668 chr4 11004637 11005286 CR1-D2 700 - 11004637 11005286 0 2 262,60, 0,589, -,-, 442172 LINE CR1 669 chr4 11020269 11020907 GGLTR11-int 512 + 11020269 11020907 0 2 99,220, 0,418, +,+, 442184 LTR ERV1 669 chr4 11022624 11024339 CR1-Y4 510 + 11022624 11024339 0 2 923,265, 0,1450, +,+, 442186 LINE CR1 669 chr4 11023565 11024065 GGLTR5B 148 - 11023565 11024065 0 2 91,384, 0,116, -,-, 442187 LTR ERVL 670 chr4 11216565 11216997 EAVHP_I-int 955 - 11216565 11216997 0 2 313,117, 0,315, -,-, 442320 LTR ERVK 673 chr4 11588608 11589458 REP131 395 - 11588608 11589458 0 2 267,303, 0,547, -,-, 442467 DNA? DNA? 673 chr4 11603004 11604177 CR1-F2 367 + 11603004 11604177 0 2 62,687, 0,486, +,+, 442477 LINE CR1 673 chr4 11626611 11628017 CR1-F2 509 - 11626611 11628017 0 2 466,627, 0,779, -,-, 442490 LINE CR1 674 chr4 11725102 11726017 CR1-X1 467 + 11725102 11726017 0 2 462,434, 0,481, +,+, 442514 LINE CR1 674 chr4 11744819 11745319 CR1-H2 584 - 11744819 11745319 0 2 391,109, 0,391, -,-, 442527 LINE CR1 674 chr4 11746026 11746375 CR1-C3 507 - 11746026 11746375 0 2 172,177, 0,172, -,-, 442529 LINE CR1 675 chr4 11849490 11849661 Char12Mar1_GG 696 - 11849490 11849661 0 2 129,41, 0,130, -,-, 442559 DNA hAT-Charlie 675 chr4 11860490 11860839 CR1-11_Crp 326 + 11860490 11860839 0 2 103,145, 0,204, +,+, 442562 LINE CR1 676 chr4 11949274 11949385 CR1-Y3 412 - 11949274 11949385 0 2 28,27, 0,84, -,-, 442600 LINE CR1 678 chr4 12252407 12252713 CR1-D2 661 + 12252407 12252713 0 2 94,212, 0,94, +,+, 442698 LINE CR1 678 chr4 12272633 12273880 CR1-11_Crp 188 - 12272633 12273880 0 2 170,256, 0,991, -,-, 442704 LINE CR1 679 chr4 12357104 12359733 CR1-C4 587 + 12357104 12359733 0 2 637,362, 0,2267, +,+, 442740 LINE CR1 680 chr4 12519202 12519450 CR1-Y4 661 + 12519202 12519450 0 2 165,83, 0,165, +,+, 442831 LINE CR1 681 chr4 12680930 12681607 CR1-L3A_Croc 303 + 12680930 12681607 0 2 111,432, 0,245, +,+, 442899 LINE CR1 682 chr4 12786127 12786648 GGERVK10-int 587 - 12786127 12786648 0 2 376,145, 0,376, -,-, 442948 LTR ERVK 683 chr4 12952583 12952704 CR1-Y4 636 + 12952583 12952704 0 2 62,59, 0,62, +,+, 443028 LINE CR1 683 chr4 12953746 12953864 tRNA-Leu-TTG 980 - 12953746 12953864 0 2 49,38, 0,80, -,-, 443030 tRNA tRNA 684 chr4 12985979 12986534 Mariner1_GG 683 - 12985979 12986534 0 3 61,157,331, 0,61,224, -,-,-, 443040 DNA TcMar-Mariner 684 chr4 13004895 13005535 CR1-Y4 567 + 13004895 13005535 0 2 545,95, 0,545, +,+, 443043 LINE CR1 684 chr4 13056908 13057939 CR1-G 864 - 13056908 13057939 0 2 472,559, 0,472, -,-, 443064 LINE CR1 684 chr4 13092642 13092893 Char12Mar1_GG 564 + 13092642 13092893 0 2 14,13, 0,238, +,+, 443082 DNA hAT-Charlie 687 chr4 13373593 13374706 CR1-D2 559 - 13373593 13374706 0 2 274,93, 0,1020, -,-, 443162 LINE CR1 687 chr4 13414615 13416363 CR1-H 769 + 13414615 13416363 0 2 933,815, 0,933, +,+, 443177 LINE CR1 687 chr4 13476116 13476670 CR1-Y2_Aves 377 - 13476116 13476670 0 3 76,234,238, 0,76,316, -,-,-, 443202 LINE CR1 688 chr4 13615922 13617097 Mariner1_GG 677 - 13615922 13617097 0 2 129,1036, 0,139, -,-, 443242 DNA TcMar-Mariner 689 chr4 13633953 13634000 (TTGTT)n 780 + 13633953 13634000 0 2 10,6, 0,41, +,+, 443252 Simple_repeat Simple_repeat 689 chr4 13648388 13649124 CR1-F2 563 + 13648388 13649124 0 2 75,660, 0,76, +,+, 443257 LINE CR1 689 chr4 13659852 13661103 CR1-H 706 + 13659852 13661103 0 2 367,873, 0,378, +,+, 443261 LINE CR1 689 chr4 13662215 13662514 CR1-E 435 - 13662215 13662514 0 2 85,181, 0,118, -,-, 443262 LINE CR1 689 chr4 13664943 13667796 GGERV20_I-int 481 + 13664943 13667796 0 3 293,192,2337, 0,324,516, +,+,+, 443265 LTR ERVL 689 chr4 13738879 13740558 CR1-Y4 568 + 13738879 13740558 0 2 858,820, 0,859, +,+, 443295 LINE CR1 689 chr4 13740597 13740895 Char12Mar1_GG 834 - 13740597 13740895 0 2 138,158, 0,140, -,-, 443296 DNA hAT-Charlie 690 chr4 13842901 13843306 CR1-X2 475 - 13842901 13843306 0 2 196,209, 0,196, -,-, 443348 LINE CR1 691 chr4 13979027 13980494 CR1-F 918 - 13979027 13980494 0 2 900,566, 0,901, -,-, 443399 LINE CR1 693 chr4 14264875 14265066 CR1-X2 329 + 14264875 14265066 0 2 76,68, 0,123, +,+, 443502 LINE CR1 695 chr4 14446964 14447232 CR1-Y 384 - 14446964 14447232 0 2 29,113, 0,155, -,-, 443551 LINE CR1 695 chr4 14486134 14488801 GGLTR9 713 + 14486134 14488801 0 2 98,297, 0,2370, +,+, 443573 LTR ERVL 698 chr4 14889710 14890106 Mariner1b_GG 581 - 14889710 14890106 0 2 323,55, 0,341, -,-, 443781 DNA TcMar-Mariner 698 chr4 14938826 14939385 CR1-C3 697 - 14938826 14939385 0 3 290,118,149, 0,292,410, -,-,-, 443820 LINE CR1 701 chr4 15225697 15226804 CR1-F2 452 + 15225697 15226804 0 2 67,1040, 0,67, +,+, 443985 LINE CR1 702 chr4 15406422 15406890 CR1-Y4 446 + 15406422 15406890 0 3 262,36,104, 0,262,364, +,+,+, 444097 LINE CR1 703 chr4 15510340 15510900 UCON20 312 + 15510340 15510900 0 2 164,161, 0,399, +,+, 444142 Unknown Unknown 704 chr4 15611011 15611962 CR1-11_Crp 217 - 15611011 15611962 0 3 411,246,154, 0,535,797, -,-,-, 444180 LINE CR1 704 chr4 15624487 15625027 CR1-L3A_Croc 366 - 15624487 15625027 0 2 184,63, 0,477, -,-, 444187 LINE CR1 704 chr4 15651363 15651412 (AACAC)n 584 + 15651363 15651412 0 2 6,7, 0,42, +,+, 444200 Simple_repeat Simple_repeat 704 chr4 15665849 15667425 CR1-H 624 + 15665849 15667425 0 2 1473,103, 0,1473, +,+, 444209 LINE CR1 705 chr4 15770687 15770747 (TGTATA)n 420 + 15770687 15770747 0 2 26,7, 0,53, +,+, 444253 Simple_repeat Simple_repeat 706 chr4 15867521 15869022 CR1-Y2_Aves 357 - 15867521 15869022 0 2 729,772, 0,729, -,-, 444305 LINE CR1 707 chr4 16054214 16054666 Char12Mar1_GG 446 - 16054214 16054666 0 2 164,251, 0,201, -,-, 444397 DNA hAT-Charlie 707 chr4 16060315 16060683 CR1-X2 338 - 16060315 16060683 0 3 25,105,189, 0,25,179, -,-,-, 444402 LINE CR1 88 chr4 16111790 16126405 Mariner1b_GG 612 - 16111790 16126405 0 2 291,113, 0,14502, -,-, 444422 DNA TcMar-Mariner 708 chr4 16177206 16177870 CR1-X2 649 - 16177206 16177870 0 2 477,187, 0,477, -,-, 444445 LINE CR1 708 chr4 16184229 16185150 CR1-F2 870 - 16184229 16185150 0 2 583,282, 0,639, -,-, 444448 LINE CR1 709 chr4 16344392 16346516 CR1-H 868 - 16344392 16346516 0 2 274,350, 0,1774, -,-, 444515 LINE CR1 710 chr4 16418638 16418812 CR1-D2 529 + 16418638 16418812 0 2 74,100, 0,74, +,+, 444543 LINE CR1 711 chr4 16603438 16603685 CR1-D2 751 - 16603438 16603685 0 2 139,104, 0,143, -,-, 444616 LINE CR1 711 chr4 16628559 16628974 CR1-C4 358 - 16628559 16628974 0 2 332,83, 0,332, -,-, 444624 LINE CR1 712 chr4 16648364 16653538 Charlie12_GG 492 - 16648364 16653538 0 3 60,289,124, 0,69,5050, -,-,-, 444631 DNA hAT-Charlie 712 chr4 16679768 16680516 CR1-Y4 689 - 16679768 16680516 0 2 151,597, 0,151, -,-, 444648 LINE CR1 715 chr4 17069048 17069848 GGLTR5A 330 + 17069048 17069848 0 2 164,340, 0,460, +,+, 444802 LTR ERVL 715 chr4 17090785 17091980 CR1-D2 591 - 17090785 17091980 0 2 924,270, 0,925, -,-, 444815 LINE CR1 715 chr4 17147467 17150077 GGERVL-C-int 750 - 17147467 17150077 0 2 510,2100, 0,510, -,-, 444846 LTR ERVL 716 chr4 17201219 17202770 CR1-F2 470 - 17201219 17202770 0 2 66,217, 0,1334, -,-, 444874 LINE CR1 716 chr4 17222726 17223544 CR1-D2 577 + 17222726 17223544 0 2 283,535, 0,283, +,+, 444884 LINE CR1 717 chr4 17374246 17374778 TguLTR5e 469 - 17374246 17374778 0 2 223,137, 0,395, -,-, 444954 LTR ERVL 717 chr4 17398577 17402351 CR1-F2 530 - 17398577 17402351 0 2 114,656, 0,3118, -,-, 444960 LINE CR1 718 chr4 17439468 17439631 CR1-Y4 619 - 17439468 17439631 0 2 100,63, 0,100, -,-, 444977 LINE CR1 718 chr4 17557758 17558203 CR1-C4 631 + 17557758 17558203 0 2 303,142, 0,303, +,+, 445032 LINE CR1 719 chr4 17565518 17566617 CR1-F2 632 + 17565518 17566617 0 2 204,97, 0,1002, +,+, 445035 LINE CR1 719 chr4 17614493 17614806 CR1-D2 712 - 17614493 17614806 0 2 198,109, 0,204, -,-, 445051 LINE CR1 720 chr4 17719909 17719982 (CGG)n 494 + 17719909 17719982 0 2 23,17, 0,56, +,+, 445109 Simple_repeat Simple_repeat 720 chr4 17758183 17759344 CR1-F2 553 + 17758183 17759344 0 2 277,96, 0,1065, +,+, 445126 LINE CR1 720 chr4 17777742 17782439 REP131 316 - 17777742 17782439 0 2 249,123, 0,4574, -,-, 445140 DNA? DNA? 721 chr4 17953853 17955295 CR1-3_Croc 180 + 17953853 17955295 0 2 117,654, 0,788, +,+, 445225 LINE CR1 722 chr4 18069072 18070094 CR1-D2 587 + 18069072 18070094 0 2 863,159, 0,863, +,+, 445282 LINE CR1 723 chr4 18099479 18099967 CR1-D 680 + 18099479 18099967 0 2 394,94, 0,394, +,+, 445308 LINE CR1 723 chr4 18106556 18107108 CR1-E 510 - 18106556 18107108 0 3 114,297,95, 0,160,457, -,-,-, 445313 LINE CR1 723 chr4 18142838 18148656 GGERV10_LTR 936 - 18142838 18148656 0 3 223,5373,221, 0,223,5597, -,-,-, 445334 LTR ERVL 723 chr4 18168976 18169761 CR1-B2 830 + 18168976 18169761 0 2 166,619, 0,166, +,+, 445347 LINE CR1 723 chr4 18200516 18201477 X2_LINE 349 + 18200516 18201477 0 2 242,285, 0,676, +,+, 445364 LINE CR1 724 chr4 18233814 18238790 GGERV30_LTR 793 - 18233814 18238790 0 4 288,259,4153,266, 0,288,549,4710, -,-,-,-, 445378 LTR ERVL 724 chr4 18239501 18239878 GGLTR5A 510 + 18239501 18239878 0 2 170,127, 0,250, +,+, 445379 LTR ERVL 724 chr4 18278108 18278537 MER130 257 - 18278108 18278537 0 2 143,258, 0,171, -,-, 445401 DNA DNA 724 chr4 18330782 18331649 CR1-X2 638 + 18330782 18331649 0 2 126,283, 0,584, +,+, 445434 LINE CR1 724 chr4 18342420 18343093 CR1-Y1_Aves 397 + 18342420 18343093 0 2 498,174, 0,499, +,+, 445445 LINE CR1 725 chr4 18356075 18358425 GGERVK10-int 394 + 18356075 18358425 0 2 252,2090, 0,260, +,+, 445453 LTR ERVK 725 chr4 18360326 18362365 CR1-F 803 - 18360326 18362365 0 2 1795,244, 0,1795, -,-, 445456 LINE CR1 725 chr4 18367437 18367609 Char12Mar1_GG 640 - 18367437 18367609 0 2 76,96, 0,76, -,-, 445458 DNA hAT-Charlie 726 chr4 18502693 18503174 GGLTR3F2 831 + 18502693 18503174 0 2 231,198, 0,283, +,+, 445535 LTR ERVL 726 chr4 18511129 18511613 GGLTR3F2 859 + 18511129 18511613 0 2 239,201, 0,283, +,+, 445539 LTR ERVL 726 chr4 18523049 18526685 CR1-C2 401 + 18523049 18526685 0 3 43,27,710, 0,502,2926, +,+,+, 445545 LINE CR1 726 chr4 18523092 18523722 CR1-Y4 600 + 18523092 18523722 0 2 459,168, 0,462, +,+, 445546 LINE CR1 726 chr4 18550616 18551006 Char12Mar1_GG 584 - 18550616 18551006 0 2 252,112, 0,278, -,-, 445563 DNA hAT-Charlie 727 chr4 18660295 18663275 GGERVL-C-int 699 + 18660295 18663275 0 3 614,227,2139, 0,614,841, +,+,+, 445629 LTR ERVL 727 chr4 18687749 18688747 CR1-Y2_Aves 388 - 18687749 18688747 0 2 193,375, 0,623, -,-, 445645 LINE CR1 727 chr4 18691131 18691860 GGLTR12C 529 + 18691131 18691860 0 2 113,254, 0,475, +,+, 445648 LTR ERVL 727 chr4 18724143 18725452 CR1-H 781 - 18724143 18725452 0 2 703,601, 0,708, -,-, 445678 LINE CR1 727 chr4 18736812 18739965 CR1-D 492 - 18736812 18739965 0 3 1451,311,533, 0,1451,2620, -,-,-, 445685 LINE CR1 728 chr4 18761033 18762100 CR1-D2 511 - 18761033 18762100 0 2 730,313, 0,754, -,-, 445700 LINE CR1 728 chr4 18776612 18777936 GGLTR7-int 716 - 18776612 18777936 0 4 606,93,208,118, 0,606,699,1206, -,-,-,-, 445715 LTR ERV1 728 chr4 18777936 18789563 GGLTR7-int 415 - 18777936 18789563 0 12 326,275,1230,1224,363,497,326,2809,71,232,327,580, 0,509,914,3337,5423,5822,6321,6827,9636,10488,10720,11047, -,-,-,-,-,-,-,-,-,-,-,-, 445716 LTR ERV1 728 chr4 18792365 18798687 GGLTR3F2 762 + 18792365 18798687 0 6 230,208,947,4354,230,229, 0,277,487,1467,5821,6093, +,+,+,+,+,+, 445726 LTR ERVL 728 chr4 18800445 18801380 CR1-C4 607 + 18800445 18801380 0 2 650,285, 0,650, +,+, 445731 LINE CR1 728 chr4 18802341 18802887 GGERVK10-int 403 - 18802341 18802887 0 3 72,101,86, 0,222,460, -,-,-, 445733 LTR ERVK 728 chr4 18806516 18809697 CR1-F 430 - 18806516 18809697 0 4 865,1096,51,220, 0,865,2127,2961, -,-,-,-, 445737 LINE CR1 728 chr4 18824512 18826213 CR1-E 685 + 18824512 18826213 0 2 927,475, 0,1226, +,+, 445751 LINE CR1 728 chr4 18836261 18836656 Sat-CR1_GG 102 + 18836261 18836656 0 2 93,53, 0,342, +,+, 445763 Satellite Satellite 732 chr4 19375962 19376941 CR1-C4 381 + 19375962 19376941 0 2 848,129, 0,850, +,+, 445793 LINE CR1 732 chr4 19378487 19386891 GGLTR7-int 294 - 19378487 19386891 0 7 117,669,1011,419,1300,266,117, 0,432,1523,3170,3848,6369,8287, -,-,-,-,-,-,-, 445795 LTR ERV1 732 chr4 19391779 19398375 GGLTR3F2 698 - 19391779 19398375 0 7 86,359,605,2604,1795,244,222, 0,123,482,1696,4300,6097,6374, -,-,-,-,-,-,-, 445800 LTR ERVL 733 chr4 19413774 19415827 CR1-X2 503 - 19413774 19415827 0 3 360,296,872, 0,884,1181, -,-,-, 445813 LINE CR1 733 chr4 19438641 19439929 GGERVL-C-int 612 + 19438641 19439929 0 2 546,742, 0,546, +,+, 445829 LTR ERVL 733 chr4 19439917 19444288 GGLTR3G1 562 + 19439917 19444288 0 4 1638,355,491,78, 0,3061,3416,4293, +,+,+,+, 445830 LTR ERVL 733 chr4 19450609 19453494 CR1-C 808 - 19450609 19453494 0 3 167,1166,987, 0,167,1898, -,-,-, 445839 LINE CR1 733 chr4 19458707 19458947 GGERV10_LTR 562 - 19458707 19458947 0 2 74,69, 0,171, -,-, 445846 LTR ERVL 733 chr4 19479693 19484218 CR1-C 566 - 19479693 19484218 0 2 3799,408, 0,4117, -,-, 445862 LINE CR1 733 chr4 19504171 19508227 GGERV28_I-int 855 + 19504171 19508227 0 2 3206,850, 0,3206, +,+, 445880 LTR ERVK 733 chr4 19508754 19511564 GGERV28_I-int 611 + 19508754 19511564 0 4 133,61,290,471, 0,302,2043,2339, +,+,+,+, 445881 LTR ERVK 733 chr4 19509495 19510339 GGLTR7-int 757 + 19509495 19510339 0 3 217,280,347, 0,217,497, +,+,+, 445882 LTR ERV1 733 chr4 19519399 19519509 (ATAT)n 334 + 19519399 19519509 0 2 18,9, 0,101, +,+, 445889 Simple_repeat Simple_repeat 734 chr4 19534038 19534924 CR1-F2 870 - 19534038 19534924 0 2 332,554, 0,332, -,-, 445901 LINE CR1 734 chr4 19540437 19547142 GGERV20_I-int 742 - 19540437 19547142 0 5 161,62,971,135,4087, 0,268,330,2236,2618, -,-,-,-,-, 445909 LTR ERVL 734 chr4 19547135 19547375 GGERV10_LTR 562 - 19547135 19547375 0 2 74,69, 0,171, -,-, 445912 LTR ERVL 734 chr4 19561378 19562222 CR1-E 625 - 19561378 19562222 0 2 482,350, 0,494, -,-, 445925 LINE CR1 734 chr4 19563783 19566190 CR1-D2 640 - 19563783 19566190 0 3 248,608,1073, 0,248,1334, -,-,-, 445927 LINE CR1 734 chr4 19578543 19580812 CR1-F2 465 + 19578543 19580812 0 3 697,549,207, 0,931,2062, +,+,+, 445935 LINE CR1 734 chr4 19585156 19590447 CR1-G 749 - 19585156 19590447 0 2 1605,2892, 0,2399, -,-, 445942 LINE CR1 734 chr4 19592957 19595193 CR1-D2 613 - 19592957 19595193 0 2 60,2176, 0,60, -,-, 445947 LINE CR1 734 chr4 19595193 19597482 CR1-F2 672 - 19595193 19597482 0 2 1805,483, 0,1806, -,-, 445948 LINE CR1 734 chr4 19601588 19602707 CR1-Y4 475 + 19601588 19602707 0 2 510,609, 0,510, +,+, 445954 LINE CR1 734 chr4 19604545 19608780 CR1-C 776 + 19604545 19608780 0 2 3046,822, 0,3413, +,+, 445958 LINE CR1 734 chr4 19646171 19647341 CR1-D 719 + 19646171 19647341 0 2 370,87, 0,1083, +,+, 445995 LINE CR1 91 chr4 19660456 19665488 CR1-E 547 - 19660456 19665488 0 2 194,562, 0,4470, -,-, 446007 LINE CR1 91 chr4 19660744 19664926 GGERVL-A-int 694 + 19660744 19664926 0 4 42,691,698,548, 0,1901,2936,3634, +,+,+,+, 446009 LTR ERVL 91 chr4 19660796 19662586 CR1-C2 796 + 19660796 19662586 0 2 285,606, 0,1184, +,+, 446010 LINE CR1 735 chr4 19667823 19668926 GGERV28_I-int 347 + 19667823 19668926 0 2 64,555, 0,548, +,+, 446016 LTR ERVK 735 chr4 19669496 19670073 GGLTR7-int 783 + 19669496 19670073 0 3 217,261,83, 0,233,494, +,+,+, 446017 LTR ERV1 735 chr4 19670127 19673601 GGLTR10C1 909 + 19670127 19673601 0 3 365,2744,365, 0,365,3109, +,+,+, 446018 LTR ERVK 735 chr4 19692399 19693140 CR1-F2 914 + 19692399 19693140 0 2 61,329, 0,412, +,+, 446036 LINE CR1 735 chr4 19705499 19706072 CR1-Y4 506 + 19705499 19706072 0 2 61,506, 0,67, +,+, 446054 LINE CR1 735 chr4 19709342 19715447 GGERVK1-int 933 + 19709342 19715447 0 4 241,5149,518,194, 0,241,5390,5911, +,+,+,+, 446058 LTR ERVK 735 chr4 19755144 19759361 GGERV10_LTR 684 - 19755144 19759361 0 4 3661,227,160,62, 0,3661,3889,4155, -,-,-,-, 446060 LTR ERVL 735 chr4 19759361 19762461 GGLTR3C2 580 - 19759361 19762461 0 2 146,74, 0,3026, -,-, 446061 LTR ERVL 735 chr4 19759506 19762388 GGERVL-B-int 772 - 19759506 19762388 0 2 564,2318, 0,564, -,-, 446062 LTR ERVL 735 chr4 19762463 19764345 GGLTR5A 394 + 19762463 19764345 0 2 302,196, 0,1686, +,+, 446063 LTR ERVL 735 chr4 19764356 19765943 GGERVL-C-int 599 + 19764356 19765943 0 2 202,35, 0,1552, +,+, 446065 LTR ERVL 735 chr4 19766694 19780267 GGERVL-B-int 613 + 19766694 19780267 0 3 550,576,81, 0,550,13492, +,+,+, 446071 LTR ERVL 735 chr4 19767820 19773938 GGERVK1-int 980 + 19767820 19773938 0 4 241,5114,522,241, 0,241,5355,5877, +,+,+,+, 446072 LTR ERVK 735 chr4 19778536 19780132 GGERVL-C-int 777 - 19778536 19780132 0 3 953,599,44, 0,953,1552, -,-,-, 446082 LTR ERVL 736 chr4 19800199 19804861 GGLTR3A 812 - 19800199 19804861 0 2 4135,527, 0,4135, -,-, 446110 LTR ERVL 736 chr4 19807445 19809219 CR1-Y4 565 - 19807445 19809219 0 3 839,60,417, 0,1283,1357, -,-,-, 446111 LINE CR1 736 chr4 19839023 19839506 GGLTR3F2 670 + 19839023 19839506 0 2 231,212, 0,271, +,+, 446131 LTR ERVL 736 chr4 19852113 19854925 CR1-C 743 - 19852113 19854925 0 2 1419,888, 0,1924, -,-, 446138 LINE CR1 736 chr4 19853536 19854041 CR1-B2 841 + 19853536 19854041 0 2 384,121, 0,384, +,+, 446139 LINE CR1 736 chr4 19874392 19877693 GGERV10_LTR 960 + 19874392 19877693 0 4 220,1468,1392,220, 0,221,1689,3081, +,+,+,+, 446153 LTR ERVL 736 chr4 19890584 19890993 (TTAGGG)n 483 + 19890584 19890993 0 2 184,187, 0,222, +,+, 446159 Simple_repeat Simple_repeat 736 chr4 19891174 19891849 (TTAGGG)n 578 + 19891174 19891849 0 3 122,173,174, 0,315,501, +,+,+, 446161 Simple_repeat Simple_repeat 736 chr4 19891998 19893033 (TTAGGG)n 545 + 19891998 19893033 0 3 180,369,277, 0,203,758, +,+,+, 446166 Simple_repeat Simple_repeat 736 chr4 19893102 19893869 (TTAGGG)n 562 + 19893102 19893869 0 2 559,189, 0,578, +,+, 446169 Simple_repeat Simple_repeat 736 chr4 19894544 19895030 (CCCTAA)n 555 + 19894544 19895030 0 2 343,132, 0,354, +,+, 446171 Simple_repeat Simple_repeat 736 chr4 19895607 19896703 (CCCTAA)n 565 + 19895607 19896703 0 2 340,745, 0,351, +,+, 446174 Simple_repeat Simple_repeat 736 chr4 19906094 19912697 GGLTR7-int 454 + 19906094 19912697 0 6 245,504,1252,1688,196,247, 0,245,1620,2876,4564,6356, +,+,+,+,+,+, 446182 LTR ERV1 736 chr4 19911405 19911864 RSV-int 293 + 19911405 19911864 0 2 156,124, 0,335, +,+, 446187 LTR ERVK 11 chr4 19920692 19926284 GGERV10_LTR 878 - 19920692 19926284 0 4 220,4435,714,221, 0,220,4655,5371, -,-,-,-, 446191 LTR ERVL 737 chr4 19950733 19952422 CR1-C 829 - 19950733 19952422 0 2 1484,205, 0,1484, -,-, 446208 LINE CR1 737 chr4 19971900 19979057 GGLTR7-int 377 + 19971900 19979057 0 7 106,236,276,153,1090,1530,107, 0,108,2354,2939,4091,5268,7050, +,+,+,+,+,+,+, 446215 LTR ERV1 737 chr4 20026177 20026520 CR1-Y1_Aves 436 - 20026177 20026520 0 2 295,47, 0,296, -,-, 446245 LINE CR1 738 chr4 20062166 20065925 CR1-C 798 - 20062166 20065925 0 2 1292,2236, 0,1523, -,-, 446263 LINE CR1 738 chr4 20165761 20170444 GGLTR7-int 303 - 20165761 20170444 0 5 1134,1081,131,437,227, 0,1224,3583,3859,4456, -,-,-,-,-, 446321 LTR ERV1 739 chr4 20208537 20213896 GGERVL18-int 550 - 20208537 20213896 0 4 333,3526,492,691, 0,337,3865,4668, -,-,-,-, 446341 LTR ERVL 739 chr4 20224229 20224274 (TTTTAAT)n 478 + 20224229 20224274 0 2 20,7, 0,38, +,+, 446351 Simple_repeat Simple_repeat 739 chr4 20251887 20252691 CR1-C4 599 - 20251887 20252691 0 2 105,699, 0,105, -,-, 446371 LINE CR1 739 chr4 20253934 20254629 CR1-Y1_Aves 418 + 20253934 20254629 0 2 497,171, 0,524, +,+, 446373 LINE CR1 740 chr4 20323561 20325295 GGERVL-C-int 703 - 20323561 20325295 0 2 320,1414, 0,320, -,-, 446425 LTR ERVL 740 chr4 20326168 20328137 GGLTR3G1 441 - 20326168 20328137 0 3 1398,50,519, 0,1400,1450, -,-,-, 446428 LTR ERVL 740 chr4 20415259 20417731 CR1-C2 737 - 20415259 20417731 0 2 404,1821, 0,651, -,-, 446488 LINE CR1 741 chr4 20480555 20483075 GGERVL18-int 530 - 20480555 20483075 0 2 1862,622, 0,1898, -,-, 446535 LTR ERVL 741 chr4 20511493 20515439 CR1-D2 429 - 20511493 20515439 0 3 11,27,2266, 0,60,1680, -,-,-, 446553 LINE CR1 741 chr4 20566868 20574017 GGERVL18-int 404 + 20566868 20574017 0 2 1496,195, 0,6954, +,+, 446583 LTR ERVL 741 chr4 20568359 20573821 GGERVL18-LTR 800 + 20568359 20573821 0 2 5134,328, 0,5134, +,+, 446584 LTR ERVL 741 chr4 20574024 20576161 GGERV20_I-int 395 + 20574024 20576161 0 2 1874,259, 0,1878, +,+, 446585 LTR ERVL 742 chr4 20603025 20607150 CR1-B 621 - 20603025 20607150 0 3 3180,421,174, 0,3180,3951, -,-,-, 446601 LINE CR1 742 chr4 20606676 20606951 GGERV10_LTR 413 + 20606676 20606951 0 2 17,162, 0,113, +,+, 446603 LTR ERVL 742 chr4 20607276 20610266 CR1-D2 658 - 20607276 20610266 0 2 24,145, 0,2845, -,-, 446604 LINE CR1 742 chr4 20631024 20631355 GGERV10_LTR 540 - 20631024 20631355 0 2 159,84, 0,247, -,-, 446630 LTR ERVL 742 chr4 20650778 20655721 GGERVL18-int 522 - 20650778 20655721 0 5 316,2495,897,916,297, 0,323,2818,3722,4646, -,-,-,-,-, 446644 LTR ERVL 742 chr4 20670511 20670845 GGERV10_LTR 648 + 20670511 20670845 0 2 77,159, 0,175, +,+, 446654 LTR ERVL 742 chr4 20674627 20676663 CR1-D 474 + 20674627 20676663 0 2 1802,198, 0,1838, +,+, 446660 LINE CR1 742 chr4 20684635 20685596 CR1-F 910 - 20684635 20685596 0 2 773,188, 0,773, -,-, 446666 LINE CR1 742 chr4 20691941 20692008 (CAA)n 450 + 20691941 20692008 0 2 12,25, 0,42, +,+, 446669 Simple_repeat Simple_repeat 743 chr4 20714510 20715952 CR1-C2 741 + 20714510 20715952 0 2 450,992, 0,450, +,+, 446682 LINE CR1 743 chr4 20779801 20781714 CR1-C 679 + 20779801 20781714 0 2 1465,87, 0,1826, +,+, 446731 LINE CR1 743 chr4 20783045 20785773 GGERVL18-int 655 - 20783045 20785773 0 2 337,2387, 0,341, -,-, 446732 LTR ERVL 743 chr4 20787449 20788330 Char12Mar1_GG 548 - 20787449 20788330 0 2 60,478, 0,403, -,-, 446733 DNA hAT-Charlie 743 chr4 20818776 20824435 GGERVL18-int 720 + 20818776 20824435 0 3 327,2753,1261, 0,335,4398, +,+,+, 446752 LTR ERVL 744 chr4 20840490 20841540 CR1-C 391 + 20840490 20841540 0 2 69,221, 0,829, +,+, 446765 LINE CR1 744 chr4 20866247 20868833 GGERVL18-int 761 - 20866247 20868833 0 5 262,385,560,483,333, 0,262,1210,1770,2253, -,-,-,-,-, 446777 LTR ERVL 744 chr4 20889847 20891155 GGERVL18-int 614 + 20889847 20891155 0 2 1068,236, 0,1072, +,+, 446793 LTR ERVL 744 chr4 20900655 20903458 GGERVL18-int 739 + 20900655 20903458 0 4 326,1477,762,238, 0,326,1803,2565, +,+,+,+, 446801 LTR ERVL 745 chr4 20982852 20983149 CR1-Y1_Aves 464 - 20982852 20983149 0 2 164,68, 0,229, -,-, 446847 LINE CR1 745 chr4 20985648 20986315 GGLTR5B 283 + 20985648 20986315 0 3 397,103,94, 0,442,573, +,+,+, 446850 LTR ERVL 745 chr4 20986711 20987638 CR1-C2 713 + 20986711 20987638 0 2 396,531, 0,396, +,+, 446853 LINE CR1 745 chr4 21006684 21008156 CR1-X 488 - 21006684 21008156 0 2 244,670, 0,802, -,-, 446865 LINE CR1 745 chr4 21010456 21012052 CR1-H 731 + 21010456 21012052 0 2 1323,273, 0,1323, +,+, 446868 LINE CR1 746 chr4 21114331 21115402 CR1-C2 731 - 21114331 21115402 0 2 999,72, 0,999, -,-, 446936 LINE CR1 746 chr4 21120344 21120401 (TTGTTTG)n 404 + 21120344 21120401 0 2 18,15, 0,42, +,+, 446940 Simple_repeat Simple_repeat 746 chr4 21129292 21129934 GGERV10_LTR 553 - 21129292 21129934 0 3 156,74,325, 0,243,317, -,-,-, 446949 LTR ERVL 746 chr4 21129948 21130269 GGERV10_LTR 527 - 21129948 21130269 0 2 158,64, 0,257, -,-, 446950 LTR ERVL 746 chr4 21148607 21148999 CR1-F2 594 - 21148607 21148999 0 2 193,187, 0,205, -,-, 446964 LINE CR1 746 chr4 21150660 21151159 CR1-F2 608 + 21150660 21151159 0 2 254,236, 0,263, +,+, 446968 LINE CR1 746 chr4 21177335 21177488 CR1-Y1_Aves 589 + 21177335 21177488 0 2 109,44, 0,109, +,+, 446989 LINE CR1 746 chr4 21187838 21188407 CR1-D2 563 - 21187838 21188407 0 2 509,60, 0,509, -,-, 446996 LINE CR1 747 chr4 21258767 21262104 CR1-D 544 - 21258767 21262104 0 2 286,437, 0,2900, -,-, 447037 LINE CR1 747 chr4 21275721 21281899 GGLTR3G2 511 + 21275721 21281899 0 8 337,89,52,4939,44,380,86,84, 0,375,498,550,5541,5585,5993,6094, +,+,+,+,+,+,+,+, 447050 LTR ERVL 747 chr4 21303714 21306458 CR1-E 695 + 21303714 21306458 0 2 1796,824, 0,1920, +,+, 447068 LINE CR1 748 chr4 21367047 21369499 GGERVL18-int 587 + 21367047 21369499 0 3 1955,141,333, 0,1974,2119, +,+,+, 447112 LTR ERVL 748 chr4 21398549 21399279 CR1-C4 574 + 21398549 21399279 0 2 150,565, 0,165, +,+, 447127 LINE CR1 748 chr4 21424925 21425127 CR1-X2 537 + 21424925 21425127 0 2 118,84, 0,118, +,+, 447143 LINE CR1 748 chr4 21485435 21486188 GGLTR12C 433 - 21485435 21486188 0 2 240,115, 0,638, -,-, 447181 LTR ERVL 749 chr4 21500000 21500688 CR1-F 722 + 21500000 21500688 0 2 218,47, 0,641, +,+, 447190 LINE CR1 749 chr4 21548773 21549643 CR1-L3A_Croc 362 + 21548773 21549643 0 2 505,60, 0,810, +,+, 447220 LINE CR1 749 chr4 21608966 21610327 Char12Mar1_GG 590 - 21608966 21610327 0 2 85,471, 0,890, -,-, 447259 DNA hAT-Charlie 750 chr4 21675044 21675821 CR1-B2 832 + 21675044 21675821 0 2 728,49, 0,728, +,+, 447299 LINE CR1 750 chr4 21688762 21689273 ENS1B-LTR 562 + 21688762 21689273 0 2 307,204, 0,307, +,+, 447311 LTR ERVL 750 chr4 21694367 21694934 CR1-C2 810 + 21694367 21694934 0 2 106,461, 0,106, +,+, 447316 LINE CR1 750 chr4 21735472 21738579 CR1-H 744 - 21735472 21738579 0 3 2725,283,80, 0,2731,3027, -,-,-, 447340 LINE CR1 751 chr4 21768393 21768622 GGLTR4A 654 + 21768393 21768622 0 2 44,185, 0,44, +,+, 447359 LTR ERVL 751 chr4 21804161 21805585 CR1-F 861 + 21804161 21805585 0 2 1011,399, 0,1025, +,+, 447381 LINE CR1 752 chr4 21957537 21959257 GGLTR3D 647 - 21957537 21959257 0 4 609,372,188,544, 0,615,988,1176, -,-,-,-, 447482 LTR ERVL 752 chr4 21962982 21969475 GGERVL18-int 460 - 21962982 21969475 0 4 279,189,4032,876, 0,287,533,5617, -,-,-,-, 447484 LTR ERVL 753 chr4 22068633 22069311 CR1-C4 516 - 22068633 22069311 0 2 208,80, 0,598, -,-, 447547 LINE CR1 753 chr4 22077374 22078465 CR1-C3 606 + 22077374 22078465 0 2 124,67, 0,1024, +,+, 447554 LINE CR1 753 chr4 22110128 22110235 (T)n 755 + 22110128 22110235 0 2 29,23, 0,84, +,+, 447572 Simple_repeat Simple_repeat 755 chr4 22284070 22285915 CR1-C2 728 + 22284070 22285915 0 2 802,305, 0,1540, +,+, 447653 LINE CR1 755 chr4 22317920 22318370 REP131 307 - 22317920 22318370 0 2 136,129, 0,321, -,-, 447671 DNA? DNA? 755 chr4 22346687 22347676 CR1-B2 854 + 22346687 22347676 0 2 544,327, 0,662, +,+, 447694 LINE CR1 755 chr4 22379339 22379415 (TTTTA)n 410 + 22379339 22379415 0 2 7,21, 0,55, +,+, 447713 Simple_repeat Simple_repeat 755 chr4 22387802 22389638 CR1-Y1_Aves 389 - 22387802 22389638 0 2 1112,583, 0,1253, -,-, 447720 LINE CR1 755 chr4 22403700 22404282 ENS1B-LTR 388 - 22403700 22404282 0 2 101,438, 0,144, -,-, 447730 LTR ERVL 756 chr4 22422763 22424014 CR1-Y 648 - 22422763 22424014 0 2 635,233, 0,1018, -,-, 447743 LINE CR1 756 chr4 22431472 22435618 GGERVL18-int 549 - 22431472 22435618 0 4 84,2687,1025,341, 0,88,2779,3805, -,-,-,-, 447747 LTR ERVL 756 chr4 22436207 22438922 Char12Mar1_GG 515 - 22436207 22438922 0 3 56,79,222, 0,1062,2493, -,-,-, 447748 DNA hAT-Charlie 756 chr4 22436247 22437268 CR1-Y3 586 - 22436247 22437268 0 2 123,284, 0,737, -,-, 447749 LINE CR1 756 chr4 22440565 22440830 GGERV10_LTR 328 + 22440565 22440830 0 2 14,139, 0,126, +,+, 447756 LTR ERVL 756 chr4 22445087 22446201 CR1-H 837 + 22445087 22446201 0 2 486,494, 0,620, +,+, 447759 LINE CR1 756 chr4 22455534 22456299 CR1-11_Crp 263 - 22455534 22456299 0 2 117,355, 0,410, -,-, 447763 LINE CR1 756 chr4 22461959 22466386 GGERV20_I-int 346 - 22461959 22466386 0 4 266,49,1468,2366, 0,274,592,2061, -,-,-,-, 447769 LTR ERVL 756 chr4 22466482 22466970 GGLTR11-int 588 - 22466482 22466970 0 2 223,215, 0,273, -,-, 447770 LTR ERV1 756 chr4 22468670 22471361 CR1-H 748 + 22468670 22471361 0 2 379,1786, 0,905, +,+, 447774 LINE CR1 757 chr4 22548601 22550887 CR1-C 746 - 22548601 22550887 0 2 1254,1032, 0,1254, -,-, 447829 LINE CR1 757 chr4 22579892 22580836 ENS1B-LTR 328 - 22579892 22580836 0 2 446,109, 0,835, -,-, 447853 LTR ERVL 757 chr4 22622913 22624123 CR1-B2 663 + 22622913 22624123 0 2 441,250, 0,960, +,+, 447891 LINE CR1 758 chr4 22682344 22687164 ENS3-int 530 + 22682344 22687164 0 6 743,82,2081,104,128,180, 0,744,1369,3450,3554,4640, +,+,+,+,+,+, 447942 LTR ERVL 758 chr4 22715565 22718796 GGLTR10C-int 572 - 22715565 22718796 0 4 373,896,1584,375, 0,376,1272,2856, -,-,-,-, 447970 LTR ERVK 758 chr4 22733304 22739257 GGERVL18-int 462 + 22733304 22739257 0 5 714,1032,2329,312,316, 0,731,2609,5321,5637, +,+,+,+,+, 447982 LTR ERVL 758 chr4 22802893 22803406 GGLTR12C 775 + 22802893 22803406 0 2 440,73, 0,440, +,+, 448047 LTR ERVL 759 chr4 22811208 22812151 CR1-E 751 + 22811208 22812151 0 2 241,226, 0,717, +,+, 448057 LINE CR1 759 chr4 22849074 22849257 CR1-D2 544 + 22849074 22849257 0 2 96,85, 0,98, +,+, 448097 LINE CR1 759 chr4 22896479 22896957 CR1-E 638 - 22896479 22896957 0 2 272,206, 0,272, -,-, 448139 LINE CR1 759 chr4 22900122 22900908 Mariner1b_GG 558 - 22900122 22900908 0 2 229,323, 0,463, -,-, 448142 DNA TcMar-Mariner 759 chr4 22903428 22904083 GGERV30_LTR 786 - 22903428 22904083 0 2 149,161, 0,494, -,-, 448144 LTR ERVL 760 chr4 22957912 22958288 GGLTR11 760 + 22957912 22958288 0 2 66,310, 0,66, +,+, 448185 LTR ERV1 760 chr4 22960490 22960989 TguLTR5e 414 + 22960490 22960989 0 2 269,134, 0,365, +,+, 448188 LTR ERVL 760 chr4 22991905 22993219 CR1-L3B_Croc 197 + 22991905 22993219 0 2 473,253, 0,1061, +,+, 448225 LINE CR1 761 chr4 23087769 23088664 CR1-H2 869 - 23087769 23088664 0 2 496,399, 0,496, -,-, 448296 LINE CR1 761 chr4 23172478 23175571 GGLTR3B4 401 + 23172478 23175571 0 2 538,2555, 0,538, +,+, 448363 LTR ERVL 761 chr4 23184033 23185568 CR1-C 656 + 23184033 23185568 0 2 181,1354, 0,181, +,+, 448372 LINE CR1 761 chr4 23192983 23193041 (TATG)n 330 + 23192983 23193041 0 2 10,17, 0,41, +,+, 448382 Simple_repeat Simple_repeat 762 chr4 23205372 23206484 CR1-H 498 - 23205372 23206484 0 2 102,38, 0,1074, -,-, 448391 LINE CR1 762 chr4 23211093 23211312 GGLTR3G2 689 - 23211093 23211312 0 2 128,91, 0,128, -,-, 448399 LTR ERVL 762 chr4 23232018 23233465 CR1-H 740 + 23232018 23233465 0 2 585,334, 0,1113, +,+, 448421 LINE CR1 762 chr4 23256404 23259138 GGLTR10C1 531 + 23256404 23259138 0 2 2451,282, 0,2452, +,+, 448444 LTR ERVK 762 chr4 23288601 23291176 CR1-C2 719 + 23288601 23291176 0 2 1711,578, 0,1997, +,+, 448470 LINE CR1 762 chr4 23308533 23308655 (TTTGTT)n 290 + 23308533 23308655 0 2 54,26, 0,96, +,+, 448481 Simple_repeat Simple_repeat 762 chr4 23327152 23327267 CR1-F2 476 - 23327152 23327267 0 2 11,78, 0,37, -,-, 448497 LINE CR1 763 chr4 23367092 23370927 GGERVL18-int 553 + 23367092 23370927 0 2 2224,1128, 0,2707, +,+, 448527 LTR ERVL 763 chr4 23404470 23405313 GGLTR7-int 773 + 23404470 23405313 0 3 217,263,347, 0,233,496, +,+,+, 448559 LTR ERV1 763 chr4 23405767 23406538 GGERV28_LTR 894 + 23405767 23406538 0 2 294,477, 0,294, +,+, 448560 LTR ERVK 763 chr4 23410544 23410625 (A)n 864 + 23410544 23410625 0 2 24,22, 0,59, +,+, 448563 Simple_repeat Simple_repeat 763 chr4 23452176 23452397 CR1-F2 400 + 23452176 23452397 0 2 88,133, 0,88, +,+, 448593 LINE CR1 763 chr4 23452695 23458524 GGERV10_LTR 977 + 23452695 23458524 0 3 223,5385,220, 0,224,5609, +,+,+, 448594 LTR ERVL 764 chr4 23485143 23486245 CR1-E 643 + 23485143 23486245 0 2 479,596, 0,506, +,+, 448606 LINE CR1 764 chr4 23551096 23551254 GA-rich 556 + 23551096 23551254 0 2 46,53, 0,105, +,+, 448650 Low_complexity Low_complexity 765 chr4 23649230 23649558 GGERV10_LTR 613 + 23649230 23649558 0 2 74,160, 0,168, +,+, 448705 LTR ERVL 765 chr4 23679299 23680574 CR1-X2 503 + 23679299 23680574 0 3 259,404,456, 0,259,819, +,+,+, 448718 LINE CR1 766 chr4 23728296 23730407 CR1-E 797 + 23728296 23730407 0 2 288,611, 0,1500, +,+, 448750 LINE CR1 767 chr4 23870018 23880847 Char12Mar1_GG 601 - 23870018 23880847 0 2 541,254, 0,10575, -,-, 448826 DNA hAT-Charlie 767 chr4 23904620 23906287 CR1-F2 401 - 23904620 23906287 0 2 654,1013, 0,654, -,-, 448846 LINE CR1 768 chr4 24034422 24034524 (TATG)n 340 + 24034422 24034524 0 2 17,33, 0,69, +,+, 448906 Simple_repeat Simple_repeat 768 chr4 24053886 24060640 CR1-F2 364 + 24053886 24060640 0 2 196,108, 0,6646, +,+, 448917 LINE CR1 768 chr4 24116291 24116352 (TGTTT)n 472 + 24116291 24116352 0 2 11,7, 0,54, +,+, 448961 Simple_repeat Simple_repeat 769 chr4 24121259 24122033 CR1-F2 650 - 24121259 24122033 0 2 73,57, 0,717, -,-, 448965 LINE CR1 770 chr4 24265061 24265916 Mariner1_GG 612 - 24265061 24265916 0 3 105,538,212, 0,105,643, -,-,-, 449061 DNA TcMar-Mariner 770 chr4 24354230 24355554 CR1-F2 548 + 24354230 24355554 0 2 900,424, 0,900, +,+, 449119 LINE CR1 771 chr4 24387163 24387813 GGLTR3C2 409 - 24387163 24387813 0 2 96,554, 0,96, -,-, 449149 LTR ERVL 772 chr4 24520034 24520266 CR1-Y2_Aves 436 - 24520034 24520266 0 2 124,95, 0,137, -,-, 449233 LINE CR1 772 chr4 24525478 24525953 Char12Mar1_GG 547 - 24525478 24525953 0 2 291,112, 0,363, -,-, 449237 DNA hAT-Charlie 772 chr4 24628920 24631767 TguLTR5e 154 - 24628920 24631767 0 2 262,310, 0,2537, -,-, 449309 LTR ERVL 772 chr4 24629181 24629855 CR1-Y3 707 - 24629181 24629855 0 2 206,124, 0,550, -,-, 449310 LINE CR1 773 chr4 24707813 24709246 CR1-G 849 + 24707813 24709246 0 2 456,165, 0,1268, +,+, 449362 LINE CR1 773 chr4 24753263 24753351 (TTA)n 470 + 24753263 24753351 0 2 40,11, 0,77, +,+, 449382 Simple_repeat Simple_repeat 774 chr4 24781906 24782519 CR1-C2 807 + 24781906 24782519 0 2 245,368, 0,245, +,+, 449401 LINE CR1 774 chr4 24803200 24805906 CR1-D 469 + 24803200 24805906 0 2 628,2069, 0,637, +,+, 449416 LINE CR1 775 chr4 25016320 25016630 CR1-Y4 529 + 25016320 25016630 0 2 174,119, 0,191, +,+, 449519 LINE CR1 776 chr4 25068869 25069167 GGLTR9 420 - 25068869 25069167 0 2 194,61, 0,237, -,-, 449550 LTR ERVL 776 chr4 25094824 25098835 CR1-C 696 + 25094824 25098835 0 2 431,500, 0,3511, +,+, 449578 LINE CR1 776 chr4 25096563 25097539 CR1-C 715 + 25096563 25097539 0 2 431,545, 0,431, +,+, 449582 LINE CR1 777 chr4 25168518 25169472 GGLTR8B 189 + 25168518 25169472 0 3 142,386,273, 0,159,681, +,+,+, 449626 LTR ERVL 777 chr4 25211444 25212380 CR1-G 628 - 25211444 25212380 0 2 339,192, 0,744, -,-, 449659 LINE CR1 777 chr4 25212994 25213351 GGLTR7-int 500 - 25212994 25213351 0 3 65,82,92, 0,113,265, -,-,-, 449661 LTR ERV1 778 chr4 25307983 25308791 LSU-rRNA_Hsa 896 - 25307983 25308791 0 2 101,29, 0,779, -,-, 449719 rRNA rRNA 778 chr4 25315006 25315113 (T)n 725 + 25315006 25315113 0 2 40,29, 0,78, +,+, 449726 Simple_repeat Simple_repeat 778 chr4 25366596 25367680 CR1-F2 711 - 25366596 25367680 0 2 895,161, 0,923, -,-, 449752 LINE CR1 779 chr4 25460639 25462682 CR1-F2 700 - 25460639 25462682 0 2 771,706, 0,1337, -,-, 449796 LINE CR1 781 chr4 25722337 25723539 CR1-C4 573 + 25722337 25723539 0 3 497,265,381, 0,551,821, +,+,+, 449896 LINE CR1 781 chr4 25768172 25772571 GGLTR7-int 134 + 25768172 25772571 0 5 233,100,715,1815,355, 0,267,616,1552,4044, +,+,+,+,+, 449909 LTR ERV1 782 chr4 25856662 25857716 GGERV10_LTR 718 + 25856662 25857716 0 3 62,34,126, 0,163,928, +,+,+, 449966 LTR ERVL 782 chr4 25860766 25862437 Charlie12_GG 592 - 25860766 25862437 0 2 56,1615, 0,56, -,-, 449969 DNA hAT-Charlie 782 chr4 25900248 25900790 GGERV10_LTR 980 - 25900248 25900790 0 2 220,322, 0,220, -,-, 449992 LTR ERVL 782 chr4 25919706 25920995 CR1-C4 684 + 25919706 25920995 0 2 892,397, 0,892, +,+, 450000 LINE CR1 783 chr4 26009075 26010354 CR1-F2 869 - 26009075 26010354 0 2 410,869, 0,410, -,-, 450071 LINE CR1 783 chr4 26016467 26016785 CR1-L3B_Croc 227 - 26016467 26016785 0 2 101,83, 0,235, -,-, 450075 LINE CR1 783 chr4 26055118 26057178 CR1-F2 585 + 26055118 26057178 0 2 989,404, 0,1656, +,+, 450110 LINE CR1 783 chr4 26076299 26077491 CR1-C4 539 + 26076299 26077491 0 3 311,336,265, 0,373,927, +,+,+, 450129 LINE CR1 784 chr4 26100574 26101926 CR1-L3A_Croc 261 + 26100574 26101926 0 2 351,426, 0,926, +,+, 450147 LINE CR1 784 chr4 26111011 26111302 GGLTR7B 92 + 26111011 26111302 0 2 66,194, 0,97, +,+, 450157 LTR ERV1 784 chr4 26115235 26116042 GGERVL-C-int 258 - 26115235 26116042 0 2 238,328, 0,479, -,-, 450160 LTR ERVL 785 chr4 26215616 26224646 Char12Mar1_GG 563 - 26215616 26224646 0 2 40,563, 0,8467, -,-, 450222 DNA hAT-Charlie 785 chr4 26244715 26245612 Char12Mar1_GG 692 - 26244715 26245612 0 2 39,502, 0,395, -,-, 450246 DNA hAT-Charlie 785 chr4 26315694 26318762 CR1-C4 474 - 26315694 26318762 0 2 1238,876, 0,2192, -,-, 450298 LINE CR1 785 chr4 26321045 26322099 ENS1-LTR 284 - 26321045 26322099 0 2 801,185, 0,869, -,-, 450301 LTR ERVL 785 chr4 26334786 26335434 GGLTR12C 557 + 26334786 26335434 0 2 98,252, 0,396, +,+, 450311 LTR ERVL 785 chr4 26344119 26344722 CR1-L3B_Croc 310 - 26344119 26344722 0 2 416,117, 0,486, -,-, 450325 LINE CR1 786 chr4 26353489 26353546 (TTTCA)n 370 + 26353489 26353546 0 2 8,10, 0,47, +,+, 450333 Simple_repeat Simple_repeat 786 chr4 26355616 26358353 GGERVL18-int 659 - 26355616 26358353 0 3 1537,852,307, 0,1537,2430, -,-,-, 450337 LTR ERVL 786 chr4 26358353 26360626 CR1-C 816 - 26358353 26360626 0 2 363,1112, 0,1161, -,-, 450338 LINE CR1 786 chr4 26382587 26384277 Mariner1b_GG 577 - 26382587 26384277 0 2 460,118, 0,1572, -,-, 450356 DNA TcMar-Mariner 786 chr4 26396119 26396711 GGLTR12C 392 - 26396119 26396711 0 2 237,72, 0,520, -,-, 450375 LTR ERVL 786 chr4 26423164 26424073 CR1-F2 307 + 26423164 26424073 0 2 82,361, 0,548, +,+, 450390 LINE CR1 786 chr4 26448149 26448789 GGERV21_LTR 411 + 26448149 26448789 0 2 45,110, 0,530, +,+, 450411 LTR ERVL 786 chr4 26451872 26452723 CR1-X2 475 - 26451872 26452723 0 2 319,330, 0,521, -,-, 450418 LINE CR1 786 chr4 26462895 26463169 CR1-Y2_Aves 331 + 26462895 26463169 0 2 131,132, 0,142, +,+, 450428 LINE CR1 787 chr4 26496744 26496794 (TTTTG)n 644 + 26496744 26496794 0 2 13,7, 0,43, +,+, 450465 Simple_repeat Simple_repeat 787 chr4 26505414 26505495 (TTCTT)n 442 + 26505414 26505495 0 2 29,7, 0,74, +,+, 450470 Simple_repeat Simple_repeat 787 chr4 26519055 26519542 GGLTR3F2 684 + 26519055 26519542 0 2 230,210, 0,277, +,+, 450479 LTR ERVL 787 chr4 26573153 26574060 CR1-Y 519 + 26573153 26574060 0 2 617,290, 0,617, +,+, 450519 LINE CR1 787 chr4 26575134 26578106 CR1-C 741 - 26575134 26578106 0 2 2323,649, 0,2323, -,-, 450520 LINE CR1 787 chr4 26582521 26583381 CR1-F2 427 - 26582521 26583381 0 2 554,185, 0,675, -,-, 450526 LINE CR1 787 chr4 26586888 26587573 CR1-C3 650 + 26586888 26587573 0 2 576,94, 0,591, +,+, 450532 LINE CR1 788 chr4 26625028 26626227 GGERV30_LTR 639 - 26625028 26626227 0 2 162,105, 0,1094, -,-, 450564 LTR ERVL 788 chr4 26627782 26628456 CR1-C3 810 + 26627782 26628456 0 2 629,38, 0,636, +,+, 450568 LINE CR1 788 chr4 26632461 26634661 CR1-F 807 - 26632461 26634661 0 2 1641,559, 0,1641, -,-, 450573 LINE CR1 788 chr4 26653245 26654133 GGLTR12C 583 - 26653245 26654133 0 2 243,645, 0,243, -,-, 450586 LTR ERVL 788 chr4 26672938 26673599 GGLTR4A 550 + 26672938 26673599 0 2 109,241, 0,420, +,+, 450598 LTR ERVL 788 chr4 26674348 26676371 GGERVL18-int 529 + 26674348 26676371 0 2 1679,344, 0,1679, +,+, 450601 LTR ERVL 788 chr4 26689484 26691010 GGLTR11 554 - 26689484 26691010 0 3 370,110,62, 0,1279,1464, -,-,-, 450610 LTR ERV1 788 chr4 26698434 26700420 GGLTR3A 863 + 26698434 26700420 0 2 1457,527, 0,1459, +,+, 450621 LTR ERVL 788 chr4 26701868 26702346 ENS1-LTR 964 + 26701868 26702346 0 2 102,376, 0,102, +,+, 450622 LTR ERVL 788 chr4 26706077 26707415 CR1-X2 383 - 26706077 26707415 0 2 406,600, 0,738, -,-, 450625 LINE CR1 789 chr4 26840974 26844858 CR1-H 838 - 26840974 26844858 0 3 327,2595,502, 0,327,3382, -,-,-, 450730 LINE CR1 790 chr4 26953053 26953993 CR1-F2 462 - 26953053 26953993 0 2 328,608, 0,332, -,-, 450814 LINE CR1 790 chr4 26967254 26967332 (A)n 1000 + 26967254 26967332 0 2 17,21, 0,57, +,+, 450822 Simple_repeat Simple_repeat 791 chr4 27019281 27019385 A-rich 336 + 27019281 27019385 0 2 46,25, 0,79, +,+, 450869 Low_complexity Low_complexity 791 chr4 27020114 27020661 Char12Mar1_GG 558 - 27020114 27020661 0 2 133,384, 0,163, -,-, 450872 DNA hAT-Charlie 791 chr4 27040593 27041752 CR1-C2 832 + 27040593 27041752 0 2 277,374, 0,785, +,+, 450885 LINE CR1 791 chr4 27095061 27095138 (CGGCAG)n 364 + 27095061 27095138 0 2 11,10, 0,67, +,+, 450924 Simple_repeat Simple_repeat 791 chr4 27109198 27109305 (T)n 860 + 27109198 27109305 0 2 32,22, 0,85, +,+, 450942 Simple_repeat Simple_repeat 792 chr4 27186235 27188093 Char12Mar1_GG 686 - 27186235 27188093 0 2 50,520, 0,1338, -,-, 450998 DNA hAT-Charlie 792 chr4 27250048 27250657 CR1-D2 523 + 27250048 27250657 0 2 211,398, 0,211, +,+, 451036 LINE CR1 793 chr4 27265258 27267190 CR1-H2 858 - 27265258 27267190 0 2 97,1779, 0,153, -,-, 451048 LINE CR1 793 chr4 27269944 27270020 (AATA)n 366 + 27269944 27270020 0 2 10,46, 0,30, +,+, 451050 Simple_repeat Simple_repeat 793 chr4 27286900 27286955 (CTTTTAG)n 404 + 27286900 27286955 0 2 7,17, 0,38, +,+, 451066 Simple_repeat Simple_repeat 793 chr4 27372656 27373608 CR1-H2 557 + 27372656 27373608 0 2 743,209, 0,743, +,+, 451127 LINE CR1 794 chr4 27396103 27397489 CR1-F2 574 + 27396103 27397489 0 2 408,128, 0,1258, +,+, 451144 LINE CR1 794 chr4 27407627 27408780 Char12Mar1_GG 500 - 27407627 27408780 0 2 312,841, 0,312, -,-, 451156 DNA hAT-Charlie 794 chr4 27465270 27467382 GGLTR11-int 821 - 27465270 27467382 0 3 946,706,425, 0,981,1687, -,-,-, 451202 LTR ERV1 794 chr4 27482782 27482855 (GTTT)n 626 + 27482782 27482855 0 2 6,21, 0,52, +,+, 451211 Simple_repeat Simple_repeat 794 chr4 27483645 27484180 (TTTC)n 872 + 27483645 27484180 0 2 239,252, 0,283, +,+, 451215 Simple_repeat Simple_repeat 794 chr4 27507181 27507268 (T)n 1000 + 27507181 27507268 0 2 27,19, 0,68, +,+, 451232 Simple_repeat Simple_repeat 795 chr4 27534859 27535802 CR1-F2 582 - 27534859 27535802 0 2 794,133, 0,810, -,-, 451258 LINE CR1 795 chr4 27569701 27571018 CR1-Y2_Aves 139 - 27569701 27571018 0 2 316,126, 0,1191, -,-, 451281 LINE CR1 795 chr4 27627876 27628613 ENS1B-LTR 914 + 27627876 27628613 0 2 321,416, 0,321, +,+, 451325 LTR ERVL 795 chr4 27634376 27635071 CR1-13_AMi 186 + 27634376 27635071 0 2 229,198, 0,497, +,+, 451332 LINE CR1 796 chr4 27657525 27657578 (TTT)n 442 + 27657525 27657578 0 2 14,8, 0,45, +,+, 451364 Simple_repeat Simple_repeat 796 chr4 27685487 27686275 CR1-D 636 + 27685487 27686275 0 2 160,518, 0,270, +,+, 451398 LINE CR1 796 chr4 27696753 27699574 CR1-C 812 + 27696753 27699574 0 2 2344,477, 0,2344, +,+, 451413 LINE CR1 796 chr4 27712318 27713625 CR1-F2 289 + 27712318 27713625 0 3 286,125,498, 0,677,809, +,+,+, 451424 LINE CR1 797 chr4 27805129 27805218 (T)n 1000 + 27805129 27805218 0 2 19,37, 0,52, +,+, 451496 Simple_repeat Simple_repeat 797 chr4 27815638 27816406 GGLTR3B3 780 - 27815638 27816406 0 2 122,324, 0,444, -,-, 451503 LTR ERVL 797 chr4 27826788 27827125 GGLTR4A 474 + 27826788 27827125 0 2 196,112, 0,225, +,+, 451512 LTR ERVL 797 chr4 27827232 27830657 CR1-F2 847 - 27827232 27830657 0 2 398,2576, 0,849, -,-, 451514 LINE CR1 797 chr4 27849564 27852705 CR1-C3 617 - 27849564 27852705 0 2 597,1642, 0,1499, -,-, 451530 LINE CR1 798 chr4 27925451 27926459 GGLTR3B2 675 - 27925451 27926459 0 2 473,535, 0,473, -,-, 451592 LTR ERVL 798 chr4 27935028 27935164 A-rich 520 + 27935028 27935164 0 2 68,32, 0,104, +,+, 451599 Low_complexity Low_complexity 798 chr4 27979993 27982851 CR1-F2 795 - 27979993 27982851 0 2 936,1922, 0,936, -,-, 451644 LINE CR1 798 chr4 28011829 28013179 CR1-F 824 - 28011829 28013179 0 2 978,372, 0,978, -,-, 451668 LINE CR1 798 chr4 28013245 28014660 CR1-D2 446 + 28013245 28014660 0 3 356,80,133, 0,356,1282, +,+,+, 451669 LINE CR1 798 chr4 28023208 28023591 GGLTR4B 579 - 28023208 28023591 0 2 154,190, 0,193, -,-, 451684 LTR ERVL 799 chr4 28071278 28072001 GGLTR12B 904 - 28071278 28072001 0 2 29,83, 0,640, -,-, 451720 LTR ERVL 799 chr4 28127079 28127200 (TATTT)n 554 + 28127079 28127200 0 2 7,34, 0,87, +,+, 451767 Simple_repeat Simple_repeat 799 chr4 28149990 28150393 GGLTR3F2 649 + 28149990 28150393 0 2 221,127, 0,276, +,+, 451789 LTR ERVL 799 chr4 28152486 28152900 GGLTR3F2 738 + 28152486 28152900 0 2 233,124, 0,290, +,+, 451794 LTR ERVL 799 chr4 28160320 28164636 ENS1-LTR 763 - 28160320 28164636 0 3 878,2639,762, 0,881,3554, -,-,-, 451801 LTR ERVL 799 chr4 28170812 28175453 ENS1-LTR 963 - 28170812 28175453 0 3 896,2832,913, 0,896,3728, -,-,-, 451808 LTR ERVL 799 chr4 28176115 28177179 GGLTR12C 738 - 28176115 28177179 0 2 56,665, 0,399, -,-, 451810 LTR ERVL 800 chr4 28182696 28183427 CR1-D2 473 + 28182696 28183427 0 2 455,269, 0,462, +,+, 451816 LINE CR1 800 chr4 28220221 28221550 CR1-Y4 678 + 28220221 28221550 0 2 50,967, 0,362, +,+, 451852 LINE CR1 800 chr4 28265582 28266308 GGLTR3D 631 - 28265582 28266308 0 2 380,219, 0,507, -,-, 451884 LTR ERVL 800 chr4 28293881 28298446 GGLTR5B 402 + 28293881 28298446 0 2 345,99, 0,4466, +,+, 451914 LTR ERVL 800 chr4 28294221 28298086 CR1-H 779 - 28294221 28298086 0 2 736,3129, 0,736, -,-, 451915 LINE CR1 800 chr4 28298083 28298346 GGERV10_LTR 478 - 28298083 28298346 0 2 107,66, 0,197, -,-, 451916 LTR ERVL 800 chr4 28306805 28307359 Char12Mar1_GG 486 - 28306805 28307359 0 2 322,188, 0,366, -,-, 451922 DNA hAT-Charlie 801 chr4 28343661 28343722 (TTTTC)n 312 + 28343661 28343722 0 2 31,6, 0,55, +,+, 451959 Simple_repeat Simple_repeat 801 chr4 28365145 28365464 GGLTR12B 757 + 28365145 28365464 0 2 114,205, 0,114, +,+, 451986 LTR ERVL 801 chr4 28378825 28379547 CR1-D2 553 + 28378825 28379547 0 2 323,309, 0,413, +,+, 451997 LINE CR1 801 chr4 28383500 28383707 GGLTR4B 532 + 28383500 28383707 0 2 123,84, 0,123, +,+, 452002 LTR ERVL 801 chr4 28403007 28403660 Mariner1b_GG 589 - 28403007 28403660 0 2 199,147, 0,506, -,-, 452016 DNA TcMar-Mariner 801 chr4 28410145 28411928 CR1-Y4 500 + 28410145 28411928 0 2 228,1167, 0,616, +,+, 452027 LINE CR1 803 chr4 28589895 28590487 CR1-Y2_Aves 268 - 28589895 28590487 0 2 99,155, 0,437, -,-, 452146 LINE CR1 803 chr4 28609566 28610471 CR1-D2 554 + 28609566 28610471 0 2 609,296, 0,609, +,+, 452166 LINE CR1 803 chr4 28652534 28656019 CR1-H 814 + 28652534 28656019 0 2 526,326, 0,3159, +,+, 452203 LINE CR1 803 chr4 28664252 28664791 CR1-Y4 477 + 28664252 28664791 0 2 170,365, 0,174, +,+, 452210 LINE CR1 804 chr4 28803840 28804174 Char12Mar1_GG 615 - 28803840 28804174 0 2 169,165, 0,169, -,-, 452310 DNA hAT-Charlie 805 chr4 28857063 28858224 CR1-D2 454 - 28857063 28858224 0 2 204,920, 0,241, -,-, 452337 LINE CR1 805 chr4 28879121 28879511 CR1-C4 598 + 28879121 28879511 0 2 297,93, 0,297, +,+, 452351 LINE CR1 806 chr4 28987893 28988202 CR1-G 853 + 28987893 28988202 0 2 184,125, 0,184, +,+, 452407 LINE CR1 806 chr4 29002002 29002446 CR1-C2 670 + 29002002 29002446 0 2 153,284, 0,160, +,+, 452416 LINE CR1 807 chr4 29174559 29175521 CR1-L3B_Croc 204 - 29174559 29175521 0 2 354,207, 0,755, -,-, 452489 LINE CR1 809 chr4 29417779 29417847 G-rich 510 + 29417779 29417847 0 2 19,11, 0,57, +,+, 452599 Low_complexity Low_complexity 810 chr4 29598665 29599686 CR1-C3 659 + 29598665 29599686 0 2 727,291, 0,730, +,+, 452671 LINE CR1 810 chr4 29606786 29607807 CR1-C3 648 + 29606786 29607807 0 2 727,291, 0,730, +,+, 452677 LINE CR1 811 chr4 29629036 29630714 L2-1_Crp 61 + 29629036 29630714 0 2 946,564, 0,1114, +,+, 452694 LINE L2 812 chr4 29789601 29789672 A-rich 314 + 29789601 29789672 0 2 13,28, 0,43, +,+, 452759 Low_complexity Low_complexity 812 chr4 29820708 29820901 CR1-3_Croc 422 + 29820708 29820901 0 2 102,63, 0,130, +,+, 452778 LINE CR1 812 chr4 29850068 29850519 L2-3_Crp 389 + 29850068 29850519 0 2 46,49, 0,402, +,+, 452793 LINE L2 813 chr4 29921400 29921570 Char12Mar1_GG 710 - 29921400 29921570 0 2 133,36, 0,134, -,-, 452823 DNA hAT-Charlie 815 chr4 30237603 30238346 CR1-F2 296 + 30237603 30238346 0 2 139,602, 0,141, +,+, 452967 LINE CR1 815 chr4 30240870 30241737 CR1-Y4 147 - 30240870 30241737 0 2 426,186, 0,681, -,-, 452970 LINE CR1 816 chr4 30285621 30286934 CR1-H 734 + 30285621 30286934 0 2 952,360, 0,953, +,+, 452997 LINE CR1 816 chr4 30403498 30404191 CR1-X1 439 - 30403498 30404191 0 2 422,266, 0,427, -,-, 453047 LINE CR1 817 chr4 30452466 30453024 CR1-11_Crp 304 + 30452466 30453024 0 2 112,168, 0,390, +,+, 453066 LINE CR1 817 chr4 30466379 30466531 CR1-F2 405 + 30466379 30466531 0 2 88,62, 0,90, +,+, 453074 LINE CR1 818 chr4 30642481 30642950 X2_LINE 288 + 30642481 30642950 0 2 239,186, 0,283, +,+, 453151 LINE CR1 819 chr4 30758729 30759162 CR1-Y2_Aves 299 - 30758729 30759162 0 2 237,173, 0,260, -,-, 453210 LINE CR1 820 chr4 30860933 30861297 CR1-Y 347 + 30860933 30861297 0 2 212,150, 0,214, +,+, 453246 LINE CR1 820 chr4 30861578 30862185 CR1-C4 338 + 30861578 30862185 0 2 44,216, 0,391, +,+, 453248 LINE CR1 820 chr4 30864963 30865088 CR1-C3 692 - 30864963 30865088 0 2 45,80, 0,45, -,-, 453250 LINE CR1 820 chr4 30868293 30869085 CR1-C4 196 + 30868293 30869085 0 2 236,211, 0,581, +,+, 453254 LINE CR1 820 chr4 30871777 30871902 CR1-C3 690 - 30871777 30871902 0 2 45,80, 0,45, -,-, 453256 LINE CR1 820 chr4 30874850 30875647 CR1-C4 162 + 30874850 30875647 0 2 235,208, 0,589, +,+, 453260 LINE CR1 820 chr4 30891990 30892792 CR1-C4 207 + 30891990 30892792 0 2 241,216, 0,586, +,+, 453263 LINE CR1 820 chr4 30895565 30895690 CR1-C3 692 - 30895565 30895690 0 2 45,80, 0,45, -,-, 453265 LINE CR1 820 chr4 30897138 30897311 GGLTR4B 739 - 30897138 30897311 0 2 83,69, 0,104, -,-, 453267 LTR ERVL 820 chr4 30898926 30899730 CR1-C4 217 + 30898926 30899730 0 2 243,216, 0,588, +,+, 453269 LINE CR1 820 chr4 30902508 30902633 CR1-C3 692 - 30902508 30902633 0 2 45,80, 0,45, -,-, 453271 LINE CR1 821 chr4 30973765 30974461 CR1-C3 475 - 30973765 30974461 0 2 96,137, 0,559, -,-, 453302 LINE CR1 821 chr4 30981923 30982349 Char12Mar1_GG 698 - 30981923 30982349 0 2 287,139, 0,287, -,-, 453311 DNA hAT-Charlie 821 chr4 30989814 30990610 GGLTR5A 483 + 30989814 30990610 0 2 480,125, 0,671, +,+, 453316 LTR ERVL 821 chr4 31010127 31010175 (TTTC)n 446 + 31010127 31010175 0 2 8,14, 0,34, +,+, 453331 Simple_repeat Simple_repeat 821 chr4 31046399 31049145 CR1-C4 509 + 31046399 31049145 0 3 338,23,43, 0,954,2703, +,+,+, 453350 LINE CR1 821 chr4 31047376 31049099 Mariner1_GG 595 - 31047376 31049099 0 2 508,785, 0,938, -,-, 453352 DNA TcMar-Mariner 822 chr4 31118131 31118218 (AATAGA)n 356 + 31118131 31118218 0 2 27,7, 0,80, +,+, 453386 Simple_repeat Simple_repeat 822 chr4 31121318 31121567 CR1-L3B_Croc 350 - 31121318 31121567 0 2 81,120, 0,129, -,-, 453390 LINE CR1 822 chr4 31179985 31180572 CR1-F2 393 + 31179985 31180572 0 2 282,304, 0,283, +,+, 453423 LINE CR1 823 chr4 31301637 31302171 L2-3_Crp 246 - 31301637 31302171 0 2 104,209, 0,325, -,-, 453483 LINE L2 825 chr4 31490312 31491168 CR1-Y2_Aves 353 + 31490312 31491168 0 2 252,93, 0,763, +,+, 453576 LINE CR1 825 chr4 31556611 31559013 CR1-D2 528 + 31556611 31559013 0 2 2080,322, 0,2080, +,+, 453613 LINE CR1 825 chr4 31561233 31562384 Char12Mar1_GG 610 + 31561233 31562384 0 2 525,571, 0,580, +,+, 453616 DNA hAT-Charlie 825 chr4 31581814 31583321 CR1-Y2_Aves 422 + 31581814 31583321 0 2 70,1398, 0,109, +,+, 453632 LINE CR1 827 chr4 31771243 31771867 CR1-E 551 + 31771243 31771867 0 2 491,45, 0,579, +,+, 453696 LINE CR1 827 chr4 31772919 31777165 GGLTR7-int 245 + 31772919 31777165 0 4 1463,1725,165,282, 0,1558,3786,3964, +,+,+,+, 453700 LTR ERV1 827 chr4 31793681 31793885 GGERV20_I-int 391 + 31793681 31793885 0 2 140,64, 0,140, +,+, 453705 LTR ERVL 828 chr4 31971894 31972200 CR1-F2 476 - 31971894 31972200 0 2 76,228, 0,78, -,-, 453810 LINE CR1 829 chr4 32043792 32044806 CR1-F2 532 + 32043792 32044806 0 2 786,200, 0,814, +,+, 453852 LINE CR1 829 chr4 32059012 32059064 (TTGCTTT)n 458 + 32059012 32059064 0 2 13,8, 0,44, +,+, 453862 Simple_repeat Simple_repeat 832 chr4 32493921 32495022 Char12Mar1_GG 489 - 32493921 32495022 0 2 415,686, 0,415, -,-, 454064 DNA hAT-Charlie 833 chr4 32528770 32528866 A-rich 624 + 32528770 32528866 0 2 42,33, 0,63, +,+, 454084 Low_complexity Low_complexity 834 chr4 32699386 32699766 CR1-E 781 - 32699386 32699766 0 2 246,127, 0,253, -,-, 454182 LINE CR1 834 chr4 32721633 32721967 Char12Mar1_GG 686 - 32721633 32721967 0 2 46,288, 0,46, -,-, 454193 DNA hAT-Charlie 835 chr4 32800624 32801465 Char12Mar1_GG 733 - 32800624 32801465 0 2 515,53, 0,788, -,-, 454242 DNA hAT-Charlie 835 chr4 32858156 32866371 REP131 205 - 32858156 32866371 0 2 176,105, 0,8110, -,-, 454274 DNA? DNA? 836 chr4 32910693 32911101 CR1-C4 481 - 32910693 32911101 0 2 78,330, 0,78, -,-, 454305 LINE CR1 836 chr4 32950513 32950577 (TACATA)n 530 + 32950513 32950577 0 2 10,22, 0,42, +,+, 454334 Simple_repeat Simple_repeat 836 chr4 32972730 32972817 (ATATATT)n 598 + 32972730 32972817 0 2 7,9, 0,78, +,+, 454353 Simple_repeat Simple_repeat 836 chr4 32994873 32997401 CR1-G 752 + 32994873 32997401 0 2 1572,610, 0,1918, +,+, 454362 LINE CR1 836 chr4 33021455 33023060 GGERVL-C-int 629 - 33021455 33023060 0 2 474,1114, 0,491, -,-, 454381 LTR ERVL 838 chr4 33210738 33211148 Char12Mar1_GG 587 - 33210738 33211148 0 2 324,86, 0,324, -,-, 454477 DNA hAT-Charlie 841 chr4 33590384 33590576 Chompy-7_Croc 108 - 33590384 33590576 0 2 36,17, 0,175, -,-, 454675 DNA PIF-Harbinger 841 chr4 33637258 33637817 CR1-Y 433 + 33637258 33637817 0 2 244,75, 0,484, +,+, 454692 LINE CR1 841 chr4 33637825 33639660 CR1-C 764 + 33637825 33639660 0 2 431,1404, 0,431, +,+, 454694 LINE CR1 841 chr4 33656048 33657159 CR1-Y2_Aves 406 - 33656048 33657159 0 2 107,972, 0,139, -,-, 454705 LINE CR1 845 chr4 34161822 34162646 CR1-B2 588 + 34161822 34162646 0 2 721,103, 0,721, +,+, 454909 LINE CR1 847 chr4 34438146 34438498 CR1-D2 609 + 34438146 34438498 0 2 221,131, 0,221, +,+, 454997 LINE CR1 849 chr4 34708922 34709371 Char12Mar1_GG 483 - 34708922 34709371 0 2 357,92, 0,357, -,-, 455095 DNA hAT-Charlie 850 chr4 34849324 34850304 CR1-C4 436 - 34849324 34850304 0 3 195,623,100, 0,195,880, -,-,-, 455151 LINE CR1 852 chr4 35103766 35104389 GGLTR11 496 + 35103766 35104389 0 2 40,323, 0,300, +,+, 455249 LTR ERV1 852 chr4 35122155 35122691 CR1-C4 681 - 35122155 35122691 0 2 354,182, 0,354, -,-, 455255 LINE CR1 853 chr4 35253373 35254006 CR1-D2 568 - 35253373 35254006 0 2 63,570, 0,63, -,-, 455299 LINE CR1 854 chr4 35359146 35359619 CR1-Y2 753 - 35359146 35359619 0 2 305,168, 0,305, -,-, 455340 LINE CR1 855 chr4 35437892 35438151 CR1-Y1_Aves 565 + 35437892 35438151 0 2 185,74, 0,185, +,+, 455366 LINE CR1 855 chr4 35484751 35486321 CR1-Y3 666 - 35484751 35486321 0 2 400,421, 0,1149, -,-, 455387 LINE CR1 856 chr4 35630713 35631867 CR1-L3B_Croc 189 + 35630713 35631867 0 2 149,356, 0,798, +,+, 455459 LINE CR1 857 chr4 35722431 35722804 GGLTR4B 541 - 35722431 35722804 0 2 136,206, 0,167, -,-, 455487 LTR ERVL 857 chr4 35750281 35750852 CR1-C4 732 + 35750281 35750852 0 2 159,45, 0,526, +,+, 455509 LINE CR1 857 chr4 35758250 35758370 (T)n 596 + 35758250 35758370 0 2 35,33, 0,87, +,+, 455513 Simple_repeat Simple_repeat 857 chr4 35764639 35765389 GGLTR9 338 + 35764639 35765389 0 2 188,180, 0,570, +,+, 455518 LTR ERVL 858 chr4 35846423 35846526 (TATA)n 400 + 35846423 35846526 0 2 7,22, 0,81, +,+, 455555 Simple_repeat Simple_repeat 858 chr4 35900508 35901529 CR1-F2 583 - 35900508 35901529 0 3 515,288,218, 0,515,803, -,-,-, 455579 LINE CR1 858 chr4 35910000 35911558 CR1-F 318 + 35910000 35911558 0 2 99,407, 0,1151, +,+, 455582 LINE CR1 858 chr4 35910099 35911162 CR1-H 782 - 35910099 35911162 0 2 709,353, 0,710, -,-, 455583 LINE CR1 859 chr4 36002914 36003318 CR1-Y4 639 + 36002914 36003318 0 2 145,53, 0,351, +,+, 455631 LINE CR1 859 chr4 36031364 36031617 CR1-X1 660 + 36031364 36031617 0 2 80,173, 0,80, +,+, 455650 LINE CR1 860 chr4 36061418 36062076 CR1-F2 704 + 36061418 36062076 0 2 476,182, 0,476, +,+, 455669 LINE CR1 860 chr4 36066961 36067242 Char12Mar1_GG 717 - 36066961 36067242 0 2 64,208, 0,73, -,-, 455671 DNA hAT-Charlie 860 chr4 36069107 36069929 CR1-H 816 + 36069107 36069929 0 2 63,205, 0,617, +,+, 455673 LINE CR1 861 chr4 36186579 36186683 (T)n 918 + 36186579 36186683 0 2 24,27, 0,77, +,+, 455745 Simple_repeat Simple_repeat 861 chr4 36206822 36207122 CR1-Y1_Aves 470 + 36206822 36207122 0 2 234,66, 0,234, +,+, 455761 LINE CR1 861 chr4 36213871 36214779 CR1-F2 459 + 36213871 36214779 0 2 248,586, 0,322, +,+, 455770 LINE CR1 862 chr4 36315164 36315533 CR1-D2 571 - 36315164 36315533 0 2 69,284, 0,85, -,-, 455828 LINE CR1 862 chr4 36372005 36374337 CR1-H 832 - 36372005 36374337 0 2 1026,1306, 0,1026, -,-, 455864 LINE CR1 862 chr4 36416727 36418243 CR1-F 251 + 36416727 36418243 0 2 1391,125, 0,1391, +,+, 455896 LINE CR1 862 chr4 36433129 36433472 GGLTR8B 189 - 36433129 36433472 0 2 217,126, 0,217, -,-, 455913 LTR ERVL 863 chr4 36498717 36499618 CR1-X2 521 - 36498717 36499618 0 3 298,498,88, 0,298,813, -,-,-, 455964 LINE CR1 863 chr4 36556422 36556671 CR1-F2 750 - 36556422 36556671 0 2 60,159, 0,90, -,-, 456007 LINE CR1 863 chr4 36561485 36562090 ENS1B-LTR 925 - 36561485 36562090 0 2 328,277, 0,328, -,-, 456011 LTR ERVL 864 chr4 36637091 36638128 CR1-Y3 662 - 36637091 36638128 0 2 206,510, 0,527, -,-, 456067 LINE CR1 864 chr4 36647690 36647986 CR1-X 344 - 36647690 36647986 0 2 110,135, 0,161, -,-, 456075 LINE CR1 864 chr4 36649625 36650403 CR1-Y2_Aves 202 + 36649625 36650403 0 3 215,203,105, 0,318,673, +,+,+, 456077 LINE CR1 864 chr4 36654235 36654589 REP131 422 - 36654235 36654589 0 2 234,116, 0,238, -,-, 456080 DNA? DNA? 864 chr4 36699497 36699870 Char12Mar1_GG 505 - 36699497 36699870 0 2 224,149, 0,224, -,-, 456121 DNA hAT-Charlie 865 chr4 36805402 36805928 GGLTR8B 270 + 36805402 36805928 0 2 86,344, 0,182, +,+, 456209 LTR ERVL 865 chr4 36810375 36810740 CR1-Y4 761 - 36810375 36810740 0 2 38,318, 0,47, -,-, 456214 LINE CR1 866 chr4 36850314 36850700 GGLTR5B 180 - 36850314 36850700 0 2 194,70, 0,316, -,-, 456248 LTR ERVL 866 chr4 36863365 36863418 A-rich 484 + 36863365 36863418 0 2 19,17, 0,36, +,+, 456257 Low_complexity Low_complexity 866 chr4 36958251 36958627 GGERV22_LTR 526 + 36958251 36958627 0 2 194,174, 0,202, +,+, 456329 LTR ERVL 868 chr4 37157013 37157500 CR1-Y2_Aves 211 - 37157013 37157500 0 2 304,131, 0,356, -,-, 456459 LINE CR1 868 chr4 37204111 37206246 CR1-L3A_Croc 229 + 37204111 37206246 0 3 285,479,149, 0,1155,1986, +,+,+, 456484 LINE CR1 868 chr4 37221078 37221860 CR1-Y4 407 - 37221078 37221860 0 2 68,699, 0,83, -,-, 456493 LINE CR1 869 chr4 37331065 37331541 GGLTR5A 308 - 37331065 37331541 0 2 78,287, 0,189, -,-, 456567 LTR ERVL 871 chr4 37499054 37499175 (TA)n 701 + 37499054 37499175 0 2 44,23, 0,98, +,+, 456649 Simple_repeat Simple_repeat 871 chr4 37538979 37540405 CR1-F 933 - 37538979 37540405 0 2 713,713, 0,713, -,-, 456672 LINE CR1 871 chr4 37590540 37592006 GGERVL18-int 709 - 37590540 37592006 0 2 278,1188, 0,278, -,-, 456694 LTR ERVL 872 chr4 37694001 37694762 GGLTR8B 568 - 37694001 37694762 0 2 613,142, 0,619, -,-, 456743 LTR ERVL 873 chr4 37762043 37762719 GGLTR5B 563 - 37762043 37762719 0 2 222,367, 0,309, -,-, 456793 LTR ERVL 873 chr4 37774018 37775155 GGLTR5B 337 + 37774018 37775155 0 2 370,130, 0,1007, +,+, 456799 LTR ERVL 873 chr4 37775693 37777555 CR1-E 711 - 37775693 37777555 0 2 336,1526, 0,336, -,-, 456801 LINE CR1 873 chr4 37807758 37808106 CR1-Y1_Aves 381 - 37807758 37808106 0 2 154,194, 0,154, -,-, 456815 LINE CR1 874 chr4 37972346 37973335 CR1-B2 754 + 37972346 37973335 0 2 362,282, 0,707, +,+, 456884 LINE CR1 876 chr4 38151530 38151600 (TTTC)n 252 + 38151530 38151600 0 2 41,12, 0,58, +,+, 456964 Simple_repeat Simple_repeat 876 chr4 38207674 38207794 (T)n 818 + 38207674 38207794 0 2 20,62, 0,58, +,+, 456992 Simple_repeat Simple_repeat 877 chr4 38349733 38350316 GGLTR5B 592 + 38349733 38350316 0 2 385,157, 0,426, +,+, 457052 LTR ERVL 109 chr4 38392298 38406811 Char12Mar1_GG 502 - 38392298 38406811 0 3 808,342,71, 0,13685,14442, -,-,-, 457077 DNA hAT-Charlie 877 chr4 38395293 38396489 CR1-Y1_Aves 477 + 38395293 38396489 0 2 569,624, 0,572, +,+, 457079 LINE CR1 879 chr4 38634288 38635688 GGLTR7-int 279 + 38634288 38635688 0 2 101,148, 0,1252, +,+, 457207 LTR ERV1 880 chr4 38666653 38667257 GGLTR3A 754 - 38666653 38667257 0 2 80,524, 0,80, -,-, 457217 LTR ERVL 881 chr4 38896966 38897028 (ATTTTT)n 362 + 38896966 38897028 0 2 16,7, 0,55, +,+, 457315 Simple_repeat Simple_repeat 886 chr4 39514339 39514797 CR1-C4 536 + 39514339 39514797 0 2 114,311, 0,147, +,+, 457604 LINE CR1 886 chr4 39577362 39578346 CR1-C4 435 - 39577362 39578346 0 2 194,100, 0,884, -,-, 457630 LINE CR1 887 chr4 39617298 39620566 CR1-C3 368 + 39617298 39620566 0 2 109,100, 0,3168, +,+, 457648 LINE CR1 887 chr4 39667626 39668127 CR1-11_Crp 187 + 39667626 39668127 0 2 168,156, 0,345, +,+, 457667 LINE CR1 888 chr4 39820115 39820444 CR1-F2 572 - 39820115 39820444 0 2 205,124, 0,205, -,-, 457742 LINE CR1 889 chr4 39924228 39924650 CR1-D2 681 + 39924228 39924650 0 2 243,179, 0,243, +,+, 457789 LINE CR1 890 chr4 40002270 40002804 CR1-F2 512 - 40002270 40002804 0 2 373,161, 0,373, -,-, 457841 LINE CR1 890 chr4 40011857 40011921 A-rich 316 + 40011857 40011921 0 2 24,18, 0,46, +,+, 457844 Low_complexity Low_complexity 890 chr4 40055915 40056121 CR1-D2 338 - 40055915 40056121 0 2 153,53, 0,153, -,-, 457857 LINE CR1 890 chr4 40057784 40058173 CR1-E 749 - 40057784 40058173 0 2 72,90, 0,299, -,-, 457858 LINE CR1 891 chr4 40133233 40133363 (TTCCC)n 286 + 40133233 40133363 0 2 46,57, 0,73, +,+, 457891 Simple_repeat Simple_repeat 891 chr4 40168586 40168828 CR1-Y2_Aves 98 - 40168586 40168828 0 2 159,51, 0,191, -,-, 457907 LINE CR1 891 chr4 40214561 40215773 GGLTR5B 393 + 40214561 40215773 0 2 388,160, 0,1052, +,+, 457926 LTR ERVL 893 chr4 40373336 40373540 CR1-F2 507 - 40373336 40373540 0 2 149,55, 0,149, -,-, 457997 LINE CR1 893 chr4 40398991 40399421 GGLTR8B 690 + 40398991 40399421 0 2 49,374, 0,56, +,+, 458007 LTR ERVL 893 chr4 40399600 40400380 CR1-D 636 + 40399600 40400380 0 2 105,675, 0,105, +,+, 458008 LINE CR1 893 chr4 40458256 40466368 Char12Mar1_GG 603 - 40458256 40466368 0 2 442,147, 0,7965, -,-, 458034 DNA hAT-Charlie 897 chr4 40912834 40916349 GGERV20_I-int 325 - 40912834 40916349 0 6 274,50,852,272,496,978, 0,278,908,1760,2041,2537, -,-,-,-,-,-, 458256 LTR ERVL 898 chr4 41071276 41072040 CR1-C4 499 + 41071276 41072040 0 2 637,113, 0,651, +,+, 458344 LINE CR1 898 chr4 41122578 41125507 CR1-C2 526 + 41122578 41125507 0 2 453,149, 0,2780, +,+, 458368 LINE CR1 898 chr4 41149666 41150531 Char12Mar1_GG 642 - 41149666 41150531 0 2 167,371, 0,494, -,-, 458389 DNA hAT-Charlie 899 chr4 41176105 41176369 Chompy-6_Croc 392 - 41176105 41176369 0 2 138,51, 0,213, -,-, 458420 DNA PIF-Harbinger 899 chr4 41268322 41269464 CR1-Y3 584 + 41268322 41269464 0 3 100,140,902, 0,100,240, +,+,+, 458482 LINE CR1 900 chr4 41303424 41303661 CR1-D2 638 - 41303424 41303661 0 2 166,55, 0,182, -,-, 458508 LINE CR1 900 chr4 41327424 41327882 CR1-Y4 636 - 41327424 41327882 0 2 190,268, 0,190, -,-, 458525 LINE CR1 900 chr4 41330615 41331542 CR1-D2 594 - 41330615 41331542 0 2 748,179, 0,748, -,-, 458526 LINE CR1 900 chr4 41346300 41347842 CR1-C3 469 + 41346300 41347842 0 2 1073,469, 0,1073, +,+, 458537 LINE CR1 900 chr4 41368106 41369099 GGLTR5B 303 - 41368106 41369099 0 2 86,201, 0,792, -,-, 458545 LTR ERVL 900 chr4 41411896 41412690 CR1-Y2_Aves 307 + 41411896 41412690 0 3 201,182,239, 0,359,555, +,+,+, 458562 LINE CR1 901 chr4 41454694 41455803 CR1-C2 626 - 41454694 41455803 0 2 728,151, 0,958, -,-, 458595 LINE CR1 901 chr4 41467866 41468437 GGLTR5A 210 + 41467866 41468437 0 2 409,137, 0,434, +,+, 458600 LTR ERVL 901 chr4 41500009 41500948 CR1-C4 459 + 41500009 41500948 0 2 81,191, 0,748, +,+, 458625 LINE CR1 901 chr4 41508719 41509315 CR1-Y3 626 - 41508719 41509315 0 2 457,112, 0,484, -,-, 458632 LINE CR1 901 chr4 41510904 41512228 CR1-D2 616 + 41510904 41512228 0 2 147,348, 0,976, +,+, 458637 LINE CR1 901 chr4 41538434 41538879 CR1-D 562 + 41538434 41538879 0 2 175,270, 0,175, +,+, 458651 LINE CR1 902 chr4 41579289 41580500 CR1-Y2_Aves 202 + 41579289 41580500 0 2 577,457, 0,754, +,+, 458680 LINE CR1 902 chr4 41586895 41593255 CR1-C2 402 - 41586895 41593255 0 3 79,237,182, 0,4883,6178, -,-,-, 458688 LINE CR1 902 chr4 41634699 41635821 CR1-L3B_Croc 358 + 41634699 41635821 0 2 180,98, 0,1024, +,+, 458717 LINE CR1 902 chr4 41671280 41672832 CR1-C3 682 - 41671280 41672832 0 2 1076,476, 0,1076, -,-, 458752 LINE CR1 903 chr4 41707360 41707696 TguLTR5e 484 - 41707360 41707696 0 2 59,277, 0,59, -,-, 458773 LTR ERVL 903 chr4 41716049 41716605 GGLTR8B 535 + 41716049 41716605 0 2 172,384, 0,172, +,+, 458783 LTR ERVL 903 chr4 41725158 41726437 CR1-F2 366 - 41725158 41726437 0 2 514,761, 0,518, -,-, 458791 LINE CR1 903 chr4 41757730 41758424 CR1-F2 707 - 41757730 41758424 0 2 69,625, 0,69, -,-, 458814 LINE CR1 904 chr4 41820272 41820376 (TTTATT)n 292 + 41820272 41820376 0 2 15,18, 0,86, +,+, 458875 Simple_repeat Simple_repeat 904 chr4 41824497 41825724 CR1-D2 478 - 41824497 41825724 0 3 671,50,457, 0,697,770, -,-,-, 458882 LINE CR1 904 chr4 41832244 41832633 CR1-L3B_Croc 353 + 41832244 41832633 0 2 72,170, 0,219, +,+, 458888 LINE CR1 904 chr4 41835490 41836027 GGLTR8B 349 + 41835490 41836027 0 2 223,59, 0,478, +,+, 458892 LTR ERVL 904 chr4 41857550 41857608 (ATTTT)n 378 + 41857550 41857608 0 2 16,23, 0,35, +,+, 458915 Simple_repeat Simple_repeat 904 chr4 41877396 41879049 CR1-Y4 558 - 41877396 41879049 0 2 948,85, 0,1568, -,-, 458926 LINE CR1 904 chr4 41878358 41878963 GGLTR3A 879 - 41878358 41878963 0 2 78,527, 0,78, -,-, 458927 LTR ERVL 904 chr4 41897769 41898004 GGLTR8B 444 + 41897769 41898004 0 2 81,132, 0,103, +,+, 458946 LTR ERVL 904 chr4 41903542 41904651 CR1-Y4 521 - 41903542 41904651 0 2 290,819, 0,290, -,-, 458949 LINE CR1 905 chr4 41952704 41952934 CR1-D2 510 - 41952704 41952934 0 2 12,218, 0,12, -,-, 458992 LINE CR1 905 chr4 42033023 42034194 CR1-Y4 527 - 42033023 42034194 0 2 551,309, 0,862, -,-, 459068 LINE CR1 905 chr4 42052497 42055881 CR1-C4 564 + 42052497 42055881 0 2 90,276, 0,3108, +,+, 459084 LINE CR1 905 chr4 42070146 42070744 GGLTR8A 310 + 42070146 42070744 0 3 334,110,115, 0,373,483, +,+,+, 459098 LTR ERVL 906 chr4 42107917 42108462 CR1-F2 598 - 42107917 42108462 0 2 200,345, 0,200, -,-, 459132 LINE CR1 906 chr4 42136567 42136943 Char12Mar1_GG 584 - 42136567 42136943 0 2 88,288, 0,88, -,-, 459156 DNA hAT-Charlie 907 chr4 42213318 42214851 CR1-C4 570 - 42213318 42214851 0 2 281,208, 0,1325, -,-, 459222 LINE CR1 907 chr4 42223109 42223429 GGLTR9 154 - 42223109 42223429 0 2 104,128, 0,192, -,-, 459229 LTR ERVL 907 chr4 42263860 42264284 Char12Mar1_GG 573 - 42263860 42264284 0 2 25,252, 0,172, -,-, 459267 DNA hAT-Charlie 907 chr4 42268481 42270679 CR1-B2 808 + 42268481 42270679 0 2 1342,850, 0,1348, +,+, 459272 LINE CR1 907 chr4 42291777 42292779 CR1-G 770 + 42291777 42292779 0 2 873,129, 0,873, +,+, 459290 LINE CR1 908 chr4 42348010 42348675 GGLTR3C1 459 + 42348010 42348675 0 2 192,467, 0,198, +,+, 459319 LTR ERVL 908 chr4 42429481 42429561 A-rich 376 + 42429481 42429561 0 2 34,11, 0,69, +,+, 459369 Low_complexity Low_complexity 908 chr4 42449392 42449761 CR1-C3 414 + 42449392 42449761 0 2 56,283, 0,86, +,+, 459384 LINE CR1 909 chr4 42571751 42572800 Mariner1_GG 606 - 42571751 42572800 0 2 719,330, 0,719, -,-, 459448 DNA TcMar-Mariner 910 chr4 42682625 42682689 (TTTG)n 542 + 42682625 42682689 0 2 12,6, 0,58, +,+, 459521 Simple_repeat Simple_repeat 910 chr4 42709703 42710093 TguLTR5e 458 - 42709703 42710093 0 2 150,149, 0,241, -,-, 459538 LTR ERVL 911 chr4 42758645 42759251 CR1-C4 589 - 42758645 42759251 0 2 176,430, 0,176, -,-, 459566 LINE CR1 911 chr4 42771302 42771783 CR1-D2 609 - 42771302 42771783 0 2 372,109, 0,372, -,-, 459574 LINE CR1 912 chr4 42864307 42867428 CR1-H2 454 + 42864307 42867428 0 2 398,61, 0,3060, +,+, 459635 LINE CR1 912 chr4 42867985 42868781 CR1-C2 640 - 42867985 42868781 0 2 546,250, 0,546, -,-, 459641 LINE CR1 912 chr4 42875464 42877000 CR1-D2 583 + 42875464 42877000 0 2 513,134, 0,1402, +,+, 459644 LINE CR1 912 chr4 42903820 42908702 CR1-F 424 + 42903820 42908702 0 2 357,1230, 0,3652, +,+, 459673 LINE CR1 912 chr4 42989813 42990025 GGLTR5B 591 - 42989813 42990025 0 2 104,108, 0,104, -,-, 459735 LTR ERVL 913 chr4 43020947 43022352 CR1-C4 609 - 43020947 43022352 0 2 397,572, 0,833, -,-, 459756 LINE CR1 913 chr4 43021350 43021785 CR1-Y3 623 + 43021350 43021785 0 2 345,90, 0,345, +,+, 459757 LINE CR1 914 chr4 43150242 43151264 CR1-D2 646 - 43150242 43151264 0 2 280,233, 0,789, -,-, 459843 LINE CR1 914 chr4 43172459 43172511 (TTTCT)n 424 + 43172459 43172511 0 2 27,6, 0,46, +,+, 459856 Simple_repeat Simple_repeat 914 chr4 43184600 43184645 (TATGTT)n 498 + 43184600 43184645 0 2 12,11, 0,34, +,+, 459864 Simple_repeat Simple_repeat 915 chr4 43314733 43317709 GGLTR3F1 949 + 43314733 43317709 0 2 2482,494, 0,2482, +,+, 459943 LTR ERVL 915 chr4 43331144 43331543 CR1-Y2 430 - 43331144 43331543 0 2 164,235, 0,164, -,-, 459952 LINE CR1 915 chr4 43370231 43370837 GGLTR5B 733 + 43370231 43370837 0 2 52,231, 0,375, +,+, 459975 LTR ERVL 916 chr4 43412124 43412586 CR1-C4 635 - 43412124 43412586 0 2 331,80, 0,382, -,-, 459999 LINE CR1 916 chr4 43453034 43453792 CR1-X1 353 + 43453034 43453792 0 2 426,332, 0,426, +,+, 460020 LINE CR1 917 chr4 43559461 43559804 UCON64 299 + 43559461 43559804 0 2 148,80, 0,263, +,+, 460083 Unknown Unknown 917 chr4 43618705 43619340 CR1-F2 515 + 43618705 43619340 0 2 263,297, 0,338, +,+, 460101 LINE CR1 918 chr4 43690879 43691961 GGERVL-A-int 140 + 43690879 43691961 0 2 218,380, 0,702, +,+, 460170 LTR ERVL 920 chr4 43959032 43959099 GA-rich 312 + 43959032 43959099 0 2 14,14, 0,53, +,+, 460315 Low_complexity Low_complexity 920 chr4 43960397 43960457 (CTTC)n 408 + 43960397 43960457 0 2 33,8, 0,52, +,+, 460317 Simple_repeat Simple_repeat 920 chr4 43986291 43986532 CR1-C4 596 - 43986291 43986532 0 2 142,99, 0,142, -,-, 460329 LINE CR1 920 chr4 44030382 44030458 (TGTT)n 326 + 44030382 44030458 0 2 14,9, 0,67, +,+, 460351 Simple_repeat Simple_repeat 921 chr4 44109000 44109433 CR1-F2 441 - 44109000 44109433 0 2 221,211, 0,222, -,-, 460414 LINE CR1 921 chr4 44112137 44113668 CR1-E 602 - 44112137 44113668 0 2 605,925, 0,606, -,-, 460419 LINE CR1 922 chr4 44182315 44184007 GGERV20_I-int 537 + 44182315 44184007 0 3 1033,50,256, 0,1386,1436, +,+,+, 460460 LTR ERVL 922 chr4 44225081 44225144 (AATT)n 356 + 44225081 44225144 0 2 14,19, 0,44, +,+, 460485 Simple_repeat Simple_repeat 923 chr4 44308163 44310600 CR1-Y3 387 - 44308163 44310600 0 2 615,1050, 0,1387, -,-, 460548 LINE CR1 923 chr4 44310569 44311457 CR1-D 371 - 44310569 44311457 0 2 162,675, 0,213, -,-, 460550 LINE CR1 923 chr4 44335824 44339545 CR1-Y4 567 + 44335824 44339545 0 2 70,167, 0,3554, +,+, 460579 LINE CR1 923 chr4 44370018 44375802 CR1-Y4 524 + 44370018 44375802 0 3 533,71,164, 0,2049,5620, +,+,+, 460585 LINE CR1 923 chr4 44420998 44421095 (TTTAAT)n 332 + 44420998 44421095 0 2 40,26, 0,71, +,+, 460622 Simple_repeat Simple_repeat 923 chr4 44429626 44430058 GGERVK10-int 532 - 44429626 44430058 0 2 362,68, 0,364, -,-, 460630 LTR ERVK 924 chr4 44435141 44435197 (TTC)n 352 + 44435141 44435197 0 2 6,9, 0,47, +,+, 460631 Simple_repeat Simple_repeat 924 chr4 44436865 44437486 Charlie12_GG 608 - 44436865 44437486 0 2 386,235, 0,386, -,-, 460633 DNA hAT-Charlie 924 chr4 44437527 44445867 Charlie12_GG 446 - 44437527 44445867 0 2 61,65, 0,8275, -,-, 460634 DNA hAT-Charlie 924 chr4 44480290 44480842 GGLTR5A 356 + 44480290 44480842 0 2 260,155, 0,397, +,+, 460670 LTR ERVL 924 chr4 44555711 44556612 CR1-C4 478 - 44555711 44556612 0 2 529,372, 0,529, -,-, 460713 LINE CR1 925 chr4 44583392 44583805 CR1-Y4 498 - 44583392 44583805 0 2 319,91, 0,322, -,-, 460724 LINE CR1 925 chr4 44598561 44600434 GGLTR4A 683 + 44598561 44600434 0 2 113,169, 0,1704, +,+, 460737 LTR ERVL 925 chr4 44598703 44600267 CR1-H 811 + 44598703 44600267 0 2 166,319, 0,1245, +,+, 460738 LINE CR1 926 chr4 44785806 44785935 GGERVL-B-int 411 + 44785806 44785935 0 2 110,19, 0,110, +,+, 460850 LTR ERVL 926 chr4 44810514 44811874 CR1-C4 450 - 44810514 44811874 0 2 196,1138, 0,222, -,-, 460868 LINE CR1 927 chr4 44836878 44838436 CR1-G 802 + 44836878 44838436 0 2 447,1018, 0,540, +,+, 460881 LINE CR1 927 chr4 44914193 44915714 GGERVL18-int 227 + 44914193 44915714 0 2 619,885, 0,636, +,+, 460925 LTR ERVL 927 chr4 44949676 44955771 GGLTR3B4 612 + 44949676 44955771 0 4 526,5000,63,504, 0,526,5526,5591, +,+,+,+, 460944 LTR ERVL 928 chr4 44987574 44988253 GGLTR9 571 - 44987574 44988253 0 2 57,279, 0,400, -,-, 460955 LTR ERVL 928 chr4 45013792 45014086 Char12Mar1_GG 695 - 45013792 45014086 0 2 176,117, 0,177, -,-, 460974 DNA hAT-Charlie 929 chr4 45114724 45115865 CR1-F2 440 + 45114724 45115865 0 2 685,124, 0,1017, +,+, 461031 LINE CR1 929 chr4 45116268 45117754 CR1-F2 655 + 45116268 45117754 0 2 900,586, 0,900, +,+, 461033 LINE CR1 929 chr4 45166948 45167401 CR1-D2 719 + 45166948 45167401 0 2 263,64, 0,389, +,+, 461051 LINE CR1 930 chr4 45238237 45238859 GGLTR5A 228 - 45238237 45238859 0 2 11,197, 0,425, -,-, 461076 LTR ERVL 930 chr4 45238859 45239757 CR1-X 512 + 45238859 45239757 0 2 309,583, 0,315, +,+, 461078 LINE CR1 930 chr4 45286828 45286874 (CTTTC)n 534 + 45286828 45286874 0 2 6,19, 0,27, +,+, 461108 Simple_repeat Simple_repeat 930 chr4 45344119 45344419 GGERV10_LTR 621 - 45344119 45344419 0 2 131,63, 0,237, -,-, 461140 LTR ERVL 932 chr4 45485957 45487035 CR1-D2 411 + 45485957 45487035 0 2 144,580, 0,498, +,+, 461223 LINE CR1 932 chr4 45529034 45529324 CR1-D2 719 - 45529034 45529324 0 2 140,150, 0,140, -,-, 461238 LINE CR1 933 chr4 45620673 45620737 (CGCCGCCT)n 582 + 45620673 45620737 0 2 17,11, 0,53, +,+, 461286 Simple_repeat Simple_repeat 933 chr4 45621088 45624866 CR1-F2 440 + 45621088 45624866 0 2 785,168, 0,3610, +,+, 461288 LINE CR1 933 chr4 45663888 45664135 CR1-F2 408 + 45663888 45664135 0 2 112,135, 0,112, +,+, 461333 LINE CR1 933 chr4 45740813 45741292 CR1-F2 469 + 45740813 45741292 0 2 346,133, 0,346, +,+, 461382 LINE CR1 934 chr4 45822663 45822721 (TTCTA)n 406 + 45822663 45822721 0 2 21,6, 0,52, +,+, 461437 Simple_repeat Simple_repeat 935 chr4 45980769 45981860 CR1-F2 404 - 45980769 45981860 0 2 864,220, 0,871, -,-, 461531 LINE CR1 935 chr4 45983504 45985880 CR1-D2 755 + 45983504 45985880 0 2 255,40, 0,2336, +,+, 461533 LINE CR1 936 chr4 46021744 46022754 CR1-Y4 707 + 46021744 46022754 0 3 59,142,509, 0,113,501, +,+,+, 461555 LINE CR1 940 chr4 46591068 46591649 CR1-B2 715 + 46591068 46591649 0 2 499,82, 0,499, +,+, 461796 LINE CR1 941 chr4 46721107 46721245 G-rich 491 + 46721107 46721245 0 2 52,55, 0,83, +,+, 461843 Low_complexity Low_complexity 941 chr4 46784637 46785160 GGLTR11-int 465 + 46784637 46785160 0 2 117,102, 0,421, +,+, 461877 LTR ERV1 942 chr4 46811430 46811713 CR1-X2 537 - 46811430 46811713 0 2 181,102, 0,181, -,-, 461885 LINE CR1 942 chr4 46891107 46892116 CR1-Y4 656 + 46891107 46892116 0 2 373,104, 0,905, +,+, 461915 LINE CR1 943 chr4 47007106 47008241 CR1-F2 500 + 47007106 47008241 0 2 1019,116, 0,1019, +,+, 461974 LINE CR1 943 chr4 47021284 47022605 CR1-F2 547 + 47021284 47022605 0 3 528,539,253, 0,528,1068, +,+,+, 461982 LINE CR1 944 chr4 47114688 47114787 G-rich 522 + 47114688 47114787 0 2 49,39, 0,60, +,+, 462046 Low_complexity Low_complexity 944 chr4 47123719 47124321 CR1-Y4 619 + 47123719 47124321 0 2 99,503, 0,99, +,+, 462065 LINE CR1 944 chr4 47144895 47145427 (CATG)n 217 + 47144895 47145427 0 2 346,169, 0,363, +,+, 462076 Simple_repeat Simple_repeat 945 chr4 47203537 47211172 CR1-Y2_Aves 239 - 47203537 47211172 0 2 34,404, 0,7231, -,-, 462105 LINE CR1 945 chr4 47300488 47301003 TguLTR5e 253 - 47300488 47301003 0 2 214,265, 0,250, -,-, 462139 LTR ERVL 946 chr4 47343215 47343721 GGLTR8A 107 - 47343215 47343721 0 2 332,174, 0,332, -,-, 462161 LTR ERVL 946 chr4 47355462 47356225 CR1-C4 580 + 47355462 47356225 0 2 415,348, 0,415, +,+, 462170 LINE CR1 946 chr4 47392713 47392770 (TGTATA)n 406 + 47392713 47392770 0 2 18,16, 0,41, +,+, 462187 Simple_repeat Simple_repeat 946 chr4 47404881 47405362 CR1-X2 522 + 47404881 47405362 0 2 95,385, 0,96, +,+, 462194 LINE CR1 947 chr4 47500433 47501144 CR1-X 251 + 47500433 47501144 0 3 341,215,153, 0,341,558, +,+,+, 462238 LINE CR1 947 chr4 47523638 47525540 CR1-X2 283 - 47523638 47525540 0 2 1011,484, 0,1418, -,-, 462256 LINE CR1 947 chr4 47576795 47577711 CR1-11_Crp 204 + 47576795 47577711 0 2 539,118, 0,798, +,+, 462284 LINE CR1 947 chr4 47578256 47578600 GGLTR5A 300 + 47578256 47578600 0 2 193,130, 0,214, +,+, 462286 LTR ERVL 948 chr4 47624541 47626585 CR1-X 126 + 47624541 47626585 0 2 348,1671, 0,373, +,+, 462307 LINE CR1 948 chr4 47636853 47637790 GGLTR5A 373 - 47636853 47637790 0 2 60,384, 0,553, -,-, 462316 LTR ERVL 948 chr4 47640999 47641745 CR1-Y1_Aves 439 + 47640999 47641745 0 2 220,526, 0,220, +,+, 462321 LINE CR1 948 chr4 47660927 47662011 CR1-X2 617 + 47660927 47662011 0 2 428,54, 0,1030, +,+, 462328 LINE CR1 949 chr4 47745603 47745965 REP131 120 - 47745603 47745965 0 2 270,61, 0,301, -,-, 462381 DNA? DNA? 949 chr4 47747285 47747599 GGLTR6 357 - 47747285 47747599 0 2 252,42, 0,272, -,-, 462383 LTR ERVL 949 chr4 47763171 47764610 CR1-X2 164 + 47763171 47764610 0 3 515,570,267, 0,549,1172, +,+,+, 462392 LINE CR1 949 chr4 47828783 47828899 (AT)n 814 + 47828783 47828899 0 2 69,36, 0,80, +,+, 462419 Simple_repeat Simple_repeat 950 chr4 47863471 47863825 CR1-D2 611 - 47863471 47863825 0 2 216,92, 0,262, -,-, 462435 LINE CR1 950 chr4 47872897 47878723 GGERV10_LTR 984 - 47872897 47878723 0 3 220,5385,220, 0,220,5606, -,-,-, 462439 LTR ERVL 951 chr4 47979131 47979291 GGLTR8A 570 + 47979131 47979291 0 2 114,46, 0,114, +,+, 462499 LTR ERVL 951 chr4 48008700 48011258 CR1-C3 628 - 48008700 48011258 0 2 1505,152, 0,2406, -,-, 462514 LINE CR1 951 chr4 48026068 48026430 CR1-E 395 + 48026068 48026430 0 2 167,195, 0,167, +,+, 462523 LINE CR1 951 chr4 48040163 48040593 Char12Mar1_GG 651 - 48040163 48040593 0 2 177,253, 0,177, -,-, 462539 DNA hAT-Charlie 951 chr4 48070829 48070974 A-rich 323 + 48070829 48070974 0 2 75,56, 0,89, +,+, 462558 Low_complexity Low_complexity 951 chr4 48078249 48078688 Mariner1b_GG 661 - 48078249 48078688 0 2 216,157, 0,282, -,-, 462563 DNA TcMar-Mariner 952 chr4 48178636 48179157 CR1-X2 507 + 48178636 48179157 0 2 186,231, 0,290, +,+, 462623 LINE CR1 955 chr4 48522060 48522747 CR1-F2 417 + 48522060 48522747 0 2 169,514, 0,173, +,+, 462795 LINE CR1 955 chr4 48559953 48560691 CR1-Y2_Aves 344 + 48559953 48560691 0 2 418,195, 0,543, +,+, 462819 LINE CR1 955 chr4 48586403 48586739 CR1-B2 799 - 48586403 48586739 0 2 81,255, 0,81, -,-, 462839 LINE CR1 957 chr4 48834435 48836051 CR1-C4 495 - 48834435 48836051 0 3 426,465,646, 0,505,970, -,-,-, 462953 LINE CR1 957 chr4 48860119 48861153 CR1-G 841 + 48860119 48861153 0 2 388,645, 0,389, +,+, 462968 LINE CR1 958 chr4 48918017 48918628 CR1-D2 590 - 48918017 48918628 0 2 465,146, 0,465, -,-, 462995 LINE CR1 958 chr4 48927994 48928663 CR1-D2 614 - 48927994 48928663 0 2 248,421, 0,248, -,-, 462998 LINE CR1 959 chr4 49046684 49047152 CR1-C4 608 + 49046684 49047152 0 2 226,242, 0,226, +,+, 463052 LINE CR1 959 chr4 49136407 49136851 GGLTR5B 333 + 49136407 49136851 0 2 142,289, 0,155, +,+, 463090 LTR ERVL 960 chr4 49226541 49227197 ENS1B-LTR 209 - 49226541 49227197 0 3 356,131,106, 0,396,550, -,-,-, 463132 LTR ERVL 960 chr4 49253483 49253571 (TTTTCT)n 500 + 49253483 49253571 0 2 6,15, 0,73, +,+, 463149 Simple_repeat Simple_repeat 960 chr4 49265579 49267206 GGERVL-B-int 730 - 49265579 49267206 0 3 44,1126,455, 0,44,1172, -,-,-, 463156 LTR ERVL 961 chr4 49352934 49353655 CR1-C 824 - 49352934 49353655 0 2 465,256, 0,465, -,-, 463203 LINE CR1 962 chr4 49463601 49467703 CR1-F2 544 + 49463601 49467703 0 3 107,235,216, 0,107,3886, +,+,+, 463263 LINE CR1 962 chr4 49477013 49477438 CR1-D2 468 + 49477013 49477438 0 2 59,286, 0,139, +,+, 463271 LINE CR1 962 chr4 49519743 49521131 CR1-F0 315 - 49519743 49521131 0 2 147,384, 0,1004, -,-, 463298 LINE CR1 962 chr4 49536387 49538567 CR1-C4 573 + 49536387 49538567 0 2 1368,812, 0,1368, +,+, 463313 LINE CR1 963 chr4 49626940 49628326 CR1-E 631 + 49626940 49628326 0 2 522,523, 0,863, +,+, 463364 LINE CR1 963 chr4 49632048 49632968 CR1-C4 498 - 49632048 49632968 0 2 492,414, 0,506, -,-, 463367 LINE CR1 963 chr4 49639835 49641746 CR1-F2 511 - 49639835 49641746 0 2 79,245, 0,1666, -,-, 463370 LINE CR1 963 chr4 49655304 49655875 CR1-X2 616 - 49655304 49655875 0 2 84,142, 0,429, -,-, 463380 LINE CR1 963 chr4 49665257 49665772 CR1-Y2_Aves 231 - 49665257 49665772 0 2 268,210, 0,305, -,-, 463391 LINE CR1 964 chr4 49677033 49677452 CR1-Y4 609 - 49677033 49677452 0 2 197,222, 0,197, -,-, 463395 LINE CR1 965 chr4 49842113 49848017 CR1-X2 488 - 49842113 49848017 0 2 80,322, 0,5582, -,-, 463468 LINE CR1 965 chr4 49845368 49845877 CR1-X2 765 + 49845368 49845877 0 2 61,57, 0,452, +,+, 463469 LINE CR1 965 chr4 49884927 49885625 CR1-C4 570 + 49884927 49885625 0 2 422,276, 0,422, +,+, 463483 LINE CR1 966 chr4 49946233 49947594 CR1-C4 617 + 49946233 49947594 0 2 251,679, 0,682, +,+, 463519 LINE CR1 966 chr4 49958459 49958904 CR1-Y1_Aves 436 - 49958459 49958904 0 2 76,369, 0,76, -,-, 463528 LINE CR1 966 chr4 49958901 49959573 CR1-Y2_Aves 392 - 49958901 49959573 0 2 535,135, 0,537, -,-, 463529 LINE CR1 967 chr4 50091508 50091701 Char12Mar1_GG 581 - 50091508 50091701 0 2 95,95, 0,98, -,-, 463587 DNA hAT-Charlie 967 chr4 50198510 50200160 CR1-F2 491 + 50198510 50200160 0 2 101,93, 0,1557, +,+, 463622 LINE CR1 967 chr4 50198611 50200064 CR1-Y3 429 - 50198611 50200064 0 2 895,554, 0,899, -,-, 463623 LINE CR1 968 chr4 50228201 50228589 GGLTR5A 290 - 50228201 50228589 0 2 171,217, 0,171, -,-, 463637 LTR ERVL 968 chr4 50232370 50232441 (CGGCCC)n 312 + 50232370 50232441 0 2 8,13, 0,58, +,+, 463640 Simple_repeat Simple_repeat 970 chr4 50503729 50506336 CR1-D2 488 - 50503729 50506336 0 3 320,829,403, 0,868,2204, -,-,-, 463746 LINE CR1 970 chr4 50511805 50512712 CR1-C3 712 + 50511805 50512712 0 2 405,494, 0,413, +,+, 463751 LINE CR1 971 chr4 50655217 50655574 CR1-L3A_Croc 295 + 50655217 50655574 0 2 98,158, 0,199, +,+, 463803 LINE CR1 973 chr4 50887338 50888528 CR1-C4 632 + 50887338 50888528 0 2 677,496, 0,694, +,+, 463880 LINE CR1 974 chr4 50997121 50997465 CR1-Y2_Aves 433 - 50997121 50997465 0 2 248,96, 0,248, -,-, 463930 LINE CR1 974 chr4 51014921 51015819 CR1-Y1_Aves 423 - 51014921 51015819 0 2 250,56, 0,842, -,-, 463940 LINE CR1 974 chr4 51054880 51054959 (AACC)n 366 + 51054880 51054959 0 2 29,8, 0,71, +,+, 463953 Simple_repeat Simple_repeat 976 chr4 51371378 51372245 CR1-D2 569 + 51371378 51372245 0 2 266,70, 0,797, +,+, 464105 LINE CR1 976 chr4 51378944 51379514 Z-REP 143 + 51378944 51379514 0 2 140,230, 0,340, +,+, 464110 Satellite macro 977 chr4 51380378 51382117 CR1-C4 569 - 51380378 51382117 0 2 229,199, 0,1540, -,-, 464112 LINE CR1 980 chr4 51809047 51809483 CR1-C4 620 - 51809047 51809483 0 2 262,121, 0,315, -,-, 464289 LINE CR1 980 chr4 51841516 51842365 CR1-X2 590 + 51841516 51842365 0 2 323,525, 0,324, +,+, 464303 LINE CR1 981 chr4 51907628 51910601 CR1-C4 400 - 51907628 51910601 0 2 74,103, 0,2870, -,-, 464327 LINE CR1 981 chr4 51965447 51965899 GGLTR5A 431 + 51965447 51965899 0 2 233,121, 0,331, +,+, 464351 LTR ERVL 981 chr4 51967492 51967824 CR1-Y1_Aves 413 + 51967492 51967824 0 2 254,57, 0,275, +,+, 464352 LINE CR1 981 chr4 51976269 51977840 CR1-Y2_Aves 79 + 51976269 51977840 0 2 786,467, 0,1104, +,+, 464356 LINE CR1 982 chr4 52081437 52082026 TguLTR5e 328 + 52081437 52082026 0 2 262,117, 0,472, +,+, 464403 LTR ERVL 982 chr4 52144871 52145603 CR1-L3B_Croc 231 - 52144871 52145603 0 3 126,120,106, 0,495,626, -,-,-, 464429 LINE CR1 983 chr4 52271530 52272312 CR1-H2 527 - 52271530 52272312 0 2 68,365, 0,417, -,-, 464481 LINE CR1 984 chr4 52348246 52348743 GGLTR5A 496 + 52348246 52348743 0 2 279,182, 0,315, +,+, 464512 LTR ERVL 984 chr4 52354038 52354674 CR1-H 832 + 52354038 52354674 0 2 235,383, 0,253, +,+, 464515 LINE CR1 985 chr4 52446648 52447451 CR1-F2 516 + 52446648 52447451 0 2 524,279, 0,524, +,+, 464558 LINE CR1 988 chr4 52840977 52842664 CR1-B 893 + 52840977 52842664 0 3 214,716,757, 0,214,930, +,+,+, 464805 LINE CR1 988 chr4 52913587 52913998 CR1-Y4 661 - 52913587 52913998 0 2 251,160, 0,251, -,-, 464846 LINE CR1 990 chr4 53136526 53137094 CR1-F2 401 - 53136526 53137094 0 2 436,132, 0,436, -,-, 464962 LINE CR1 992 chr4 53367763 53369892 CR1-G 832 - 53367763 53369892 0 2 928,1200, 0,929, -,-, 465055 LINE CR1 993 chr4 53491988 53492573 CR1-F2 421 + 53491988 53492573 0 2 99,140, 0,445, +,+, 465149 LINE CR1 993 chr4 53556264 53557496 CR1-L3B_Croc 299 + 53556264 53557496 0 3 370,117,516, 0,422,716, +,+,+, 465185 LINE CR1 994 chr4 53653761 53659094 CR1-F2 280 + 53653761 53659094 0 2 115,194, 0,5139, +,+, 465235 LINE CR1 996 chr4 53920652 53921081 CR1-F2 560 - 53920652 53921081 0 2 259,160, 0,269, -,-, 465370 LINE CR1 997 chr4 54044477 54044896 CR1-X 462 - 54044477 54044896 0 3 153,134,117, 0,153,302, -,-,-, 465430 LINE CR1 997 chr4 54069124 54069663 CR1-Y2_Aves 194 - 54069124 54069663 0 2 35,159, 0,380, -,-, 465446 LINE CR1 997 chr4 54069159 54069490 CR1-Y2 321 - 54069159 54069490 0 2 188,143, 0,188, -,-, 465447 LINE CR1 997 chr4 54088536 54089787 CR1-F2 597 + 54088536 54089787 0 2 279,971, 0,280, +,+, 465456 LINE CR1 997 chr4 54113309 54113381 (TA)n 234 + 54113309 54113381 0 2 7,18, 0,54, +,+, 465470 Simple_repeat Simple_repeat 997 chr4 54115686 54116689 Mariner1_GG 442 + 54115686 54116689 0 2 823,150, 0,853, +,+, 465474 DNA TcMar-Mariner 998 chr4 54197142 54197683 CR1-Y3 618 + 54197142 54197683 0 2 64,471, 0,70, +,+, 465512 LINE CR1 999 chr4 54338508 54339457 CR1-D 698 + 54338508 54339457 0 2 436,513, 0,436, +,+, 465582 LINE CR1 1002 chr4 54750614 54750735 GGLTR12C 917 - 54750614 54750735 0 2 43,67, 0,54, -,-, 465812 LTR ERVL 1002 chr4 54751625 54753035 ENS3-int 481 - 54751625 54753035 0 2 339,1071, 0,339, -,-, 465813 LTR ERVL 1002 chr4 54779587 54780062 GGLTR3E3 817 + 54779587 54780062 0 2 432,30, 0,445, +,+, 465838 LTR ERVL 1003 chr4 54831337 54831927 CR1-D 659 + 54831337 54831927 0 2 184,406, 0,184, +,+, 465860 LINE CR1 1004 chr4 54960083 54965932 CR1-C2 495 - 54960083 54965932 0 3 492,443,419, 0,4987,5430, -,-,-, 465912 LINE CR1 1004 chr4 54991716 54992434 CR1-L3B_Croc 239 + 54991716 54992434 0 2 192,393, 0,325, +,+, 465936 LINE CR1 1006 chr4 55231340 55233283 CR1-F2 652 - 55231340 55233283 0 2 291,1652, 0,291, -,-, 466057 LINE CR1 1007 chr4 55398289 55398558 GGLTR5A 491 + 55398289 55398558 0 2 173,93, 0,176, +,+, 466135 LTR ERVL 1008 chr4 55497409 55498195 GGLTR8A 553 + 55497409 55498195 0 2 428,358, 0,428, +,+, 466177 LTR ERVL 1008 chr4 55506743 55508021 CR1-Y1_Aves 556 + 55506743 55508021 0 2 92,296, 0,982, +,+, 466182 LINE CR1 1008 chr4 55511913 55512568 CR1-L3B_Croc 289 + 55511913 55512568 0 3 93,161,308, 0,159,347, +,+,+, 466187 LINE CR1 1009 chr4 55596697 55596805 A-rich 622 + 55596697 55596805 0 2 53,28, 0,80, +,+, 466245 Low_complexity Low_complexity 1009 chr4 55603025 55603411 Char12Mar1_GG 527 - 55603025 55603411 0 2 312,74, 0,312, -,-, 466251 DNA hAT-Charlie 1009 chr4 55637575 55637863 CR1-D2 594 + 55637575 55637863 0 2 165,123, 0,165, +,+, 466281 LINE CR1 1009 chr4 55683073 55683505 Char12Mar1_GG 555 - 55683073 55683505 0 2 218,214, 0,218, -,-, 466300 DNA hAT-Charlie 1010 chr4 55768103 55770817 CR1-F2 655 + 55768103 55770817 0 3 260,882,249, 0,260,2465, +,+,+, 466350 LINE CR1 1010 chr4 55769250 55770565 GGERVL-C-int 837 - 55769250 55770565 0 2 324,991, 0,324, -,-, 466351 LTR ERVL 1010 chr4 55803153 55804760 CR1-C2 673 + 55803153 55804760 0 2 1154,453, 0,1154, +,+, 466380 LINE CR1 1010 chr4 55811993 55812469 GGLTR5A 530 - 55811993 55812469 0 2 53,160, 0,316, -,-, 466386 LTR ERVL 1011 chr4 55877764 55880592 CR1-E 522 + 55877764 55880592 0 2 115,2575, 0,253, +,+, 466432 LINE CR1 1011 chr4 55911040 55911637 CR1-C4 460 - 55911040 55911637 0 2 449,148, 0,449, -,-, 466453 LINE CR1 1012 chr4 55971512 55973321 Charlie12_GG 502 + 55971512 55973321 0 2 539,1245, 0,564, +,+, 466489 DNA hAT-Charlie 1012 chr4 55981908 55982370 Char12Mar1_GG 620 - 55981908 55982370 0 2 329,120, 0,342, -,-, 466496 DNA hAT-Charlie 1012 chr4 55991015 55992036 Char12Mar1_GG 501 - 55991015 55992036 0 2 184,837, 0,184, -,-, 466503 DNA hAT-Charlie 1012 chr4 56044147 56044476 CR1-D2 616 - 56044147 56044476 0 2 156,127, 0,202, -,-, 466541 LINE CR1 1013 chr4 56176381 56176800 Char12Mar1_GG 573 - 56176381 56176800 0 2 82,248, 0,171, -,-, 466618 DNA hAT-Charlie 1013 chr4 56218361 56218440 (A)n 782 + 56218361 56218440 0 2 30,29, 0,50, +,+, 466646 Simple_repeat Simple_repeat 1014 chr4 56256558 56258367 CR1-D2 543 - 56256558 56258367 0 2 529,536, 0,1273, -,-, 466665 LINE CR1 1014 chr4 56333092 56333638 CR1-Y 316 + 56333092 56333638 0 2 120,383, 0,163, +,+, 466710 LINE CR1 1014 chr4 56353582 56354031 CR1-F2 296 - 56353582 56354031 0 2 245,192, 0,257, -,-, 466727 LINE CR1 1015 chr4 56430433 56430961 GGLTR11 456 + 56430433 56430961 0 2 45,266, 0,262, +,+, 466773 LTR ERV1 1017 chr4 56670502 56670549 (GTTTG)n 582 + 56670502 56670549 0 2 7,6, 0,41, +,+, 466884 Simple_repeat Simple_repeat 1019 chr4 56964462 56965886 CR1-E 687 + 56964462 56965886 0 2 873,551, 0,873, +,+, 467052 LINE CR1 1020 chr4 57055291 57056312 Char12Mar1_GG 738 - 57055291 57056312 0 2 52,503, 0,518, -,-, 467099 DNA hAT-Charlie 1020 chr4 57058273 57058594 CR1-X2 578 + 57058273 57058594 0 2 257,64, 0,257, +,+, 467101 LINE CR1 1020 chr4 57073641 57075255 CR1-D 656 - 57073641 57075255 0 2 676,937, 0,677, -,-, 467109 LINE CR1 1023 chr4 57485175 57485680 CR1-F2 470 + 57485175 57485680 0 2 90,66, 0,439, +,+, 467279 LINE CR1 1023 chr4 57505377 57505448 GGLTR4A 767 + 57505377 57505448 0 2 35,34, 0,37, +,+, 467300 LTR ERVL 1024 chr4 57566609 57566708 A-rich 567 + 57566609 57566708 0 2 38,44, 0,55, +,+, 467338 Low_complexity Low_complexity 1024 chr4 57570629 57570686 (AACA)n 472 + 57570629 57570686 0 2 6,34, 0,23, +,+, 467340 Simple_repeat Simple_repeat 1024 chr4 57608430 57608734 GGLTR5B 694 + 57608430 57608734 0 2 254,50, 0,254, +,+, 467362 LTR ERVL 1027 chr4 57999565 57999687 (A)n 738 + 57999565 57999687 0 2 26,41, 0,81, +,+, 467566 Simple_repeat Simple_repeat 1028 chr4 58135574 58136568 Char12Mar1_GG 523 - 58135574 58136568 0 2 100,465, 0,529, -,-, 467641 DNA hAT-Charlie 1029 chr4 58277075 58278183 CR1-L3A_Croc 86 + 58277075 58278183 0 2 174,252, 0,856, +,+, 467733 LINE CR1 1030 chr4 58413093 58413883 CR1-D2 622 - 58413093 58413883 0 3 234,164,392, 0,234,398, -,-,-, 467793 LINE CR1 1031 chr4 58539152 58539637 CR1-D 670 + 58539152 58539637 0 2 78,407, 0,78, +,+, 467858 LINE CR1 1031 chr4 58578563 58578680 Char12Mar1_GG 695 - 58578563 58578680 0 2 80,37, 0,80, -,-, 467884 DNA hAT-Charlie 1032 chr4 58676849 58676951 (TATTTAT)n 342 + 58676849 58676951 0 2 40,17, 0,85, +,+, 467922 Simple_repeat Simple_repeat 1032 chr4 58696345 58696983 CR1-Y2_Aves 267 + 58696345 58696983 0 2 263,136, 0,502, +,+, 467938 LINE CR1 1033 chr4 58760851 58760960 (T)n 892 + 58760851 58760960 0 2 19,31, 0,78, +,+, 467963 Simple_repeat Simple_repeat 1034 chr4 58874017 58874076 (CTTT)n 466 + 58874017 58874076 0 2 8,11, 0,48, +,+, 468026 Simple_repeat Simple_repeat 1034 chr4 58933257 58933624 CR1-X2 538 + 58933257 58933624 0 2 156,211, 0,156, +,+, 468051 LINE CR1 1036 chr4 59165771 59166213 GGLTR5A 487 - 59165771 59166213 0 2 128,257, 0,185, -,-, 468171 LTR ERVL 1036 chr4 59232275 59232832 CR1-Y1_Aves 554 + 59232275 59232832 0 2 122,435, 0,122, +,+, 468200 LINE CR1 1037 chr4 59261064 59261498 CR1-X2 496 + 59261064 59261498 0 2 157,277, 0,157, +,+, 468214 LINE CR1 1037 chr4 59262502 59264321 CR1-F0 912 - 59262502 59264321 0 2 54,1765, 0,54, -,-, 468216 LINE CR1 1038 chr4 59411011 59412042 CR1-Y1_Aves 474 - 59411011 59412042 0 2 169,849, 0,182, -,-, 468310 LINE CR1 1038 chr4 59469094 59471007 CR1-Y4 446 + 59469094 59471007 0 3 1132,273,508, 0,1132,1405, +,+,+, 468350 LINE CR1 1039 chr4 59506787 59507126 CR1-C 690 - 59506787 59507126 0 2 19,281, 0,58, -,-, 468372 LINE CR1 1039 chr4 59547888 59548473 CR1-H 786 - 59547888 59548473 0 2 121,463, 0,122, -,-, 468402 LINE CR1 1039 chr4 59591898 59593671 CR1-C4 627 - 59591898 59593671 0 2 53,472, 0,1301, -,-, 468431 LINE CR1 1040 chr4 59646332 59646432 (T)n 1000 + 59646332 59646432 0 2 17,25, 0,75, +,+, 468453 Simple_repeat Simple_repeat 1040 chr4 59658790 59660080 CR1-L3A_Croc 173 - 59658790 59660080 0 3 126,449,232, 0,249,1058, -,-,-, 468459 LINE CR1 1040 chr4 59683868 59684137 Char12Mar1_GG 707 - 59683868 59684137 0 2 139,78, 0,191, -,-, 468472 DNA hAT-Charlie 1041 chr4 59807422 59809411 CR1-C4 612 + 59807422 59809411 0 2 1375,131, 0,1858, +,+, 468546 LINE CR1 1041 chr4 59809942 59811862 CR1-F2 545 + 59809942 59811862 0 2 1265,654, 0,1266, +,+, 468548 LINE CR1 1041 chr4 59852577 59857233 CR1-C4 492 - 59852577 59857233 0 3 23,44,198, 0,107,4458, -,-,-, 468567 LINE CR1 1041 chr4 59852600 59853006 CR1-D2 647 - 59852600 59853006 0 2 84,322, 0,84, -,-, 468568 LINE CR1 1042 chr4 59919025 59921206 CR1-C2 427 + 59919025 59921206 0 3 183,1079,357, 0,745,1824, +,+,+, 468610 LINE CR1 1042 chr4 59931818 59932008 CR1-C3 511 + 59931818 59932008 0 2 116,74, 0,116, +,+, 468618 LINE CR1 1042 chr4 59934439 59935011 CR1-Y4 539 + 59934439 59935011 0 2 392,180, 0,392, +,+, 468621 LINE CR1 1043 chr4 60033217 60033570 Char12Mar1_GG 529 - 60033217 60033570 0 2 92,261, 0,92, -,-, 468673 DNA hAT-Charlie 1043 chr4 60072709 60072822 GGLTR8A 724 - 60072709 60072822 0 2 55,58, 0,55, -,-, 468704 LTR ERVL 1045 chr4 60369418 60372340 CR1-C4 607 + 60369418 60372340 0 3 873,50,1056, 0,1805,1866, +,+,+, 468839 LINE CR1 1046 chr4 60430887 60432345 CR1-D 613 + 60430887 60432345 0 2 1053,405, 0,1053, +,+, 468862 LINE CR1 1046 chr4 60444996 60445069 (T)n 692 + 60444996 60445069 0 2 24,32, 0,41, +,+, 468864 Simple_repeat Simple_repeat 1046 chr4 60550612 60551943 CR1-Y4 614 - 60550612 60551943 0 2 141,1005, 0,326, -,-, 468906 LINE CR1 1047 chr4 60558124 60560931 CR1-F0 426 - 60558124 60560931 0 2 123,91, 0,2716, -,-, 468912 LINE CR1 1049 chr4 60840711 60842361 CR1-D2 647 + 60840711 60842361 0 2 324,789, 0,861, +,+, 469032 LINE CR1 1049 chr4 60866304 60867911 CR1-Y1_Aves 348 + 60866304 60867911 0 2 277,224, 0,1383, +,+, 469045 LINE CR1 1049 chr4 60931333 60931677 GGERVL-A-int 587 + 60931333 60931677 0 2 164,180, 0,164, +,+, 469075 LTR ERVL 1050 chr4 60962872 60962963 CR1-Y4 532 + 60962872 60962963 0 2 63,28, 0,63, +,+, 469083 LINE CR1 1050 chr4 61008246 61008550 CR1-F2 287 + 61008246 61008550 0 2 129,127, 0,177, +,+, 469103 LINE CR1 1050 chr4 61069986 61070435 REP131 242 - 61069986 61070435 0 2 138,200, 0,249, -,-, 469122 DNA? DNA? 1051 chr4 61192970 61193933 CR1-E 546 - 61192970 61193933 0 2 143,307, 0,656, -,-, 469170 LINE CR1 1053 chr4 61377148 61377661 CR1-C3 506 + 61377148 61377661 0 2 190,323, 0,190, +,+, 469242 LINE CR1 1055 chr4 61609119 61610687 CR1-X2 621 - 61609119 61610687 0 2 225,1343, 0,225, -,-, 469361 LINE CR1 1055 chr4 61687722 61688986 CR1-Y2_Aves 355 - 61687722 61688986 0 2 505,100, 0,1164, -,-, 469389 LINE CR1 1055 chr4 61689161 61690478 CR1-D 687 - 61689161 61690478 0 2 1172,145, 0,1172, -,-, 469391 LINE CR1 1057 chr4 61877253 61877576 CR1-Y2_Aves 375 - 61877253 61877576 0 2 207,75, 0,248, -,-, 469499 LINE CR1 1057 chr4 61898234 61898323 (T)n 762 + 61898234 61898323 0 2 37,24, 0,65, +,+, 469514 Simple_repeat Simple_repeat 1057 chr4 61946143 61946662 CR1-Y1_Aves 419 + 61946143 61946662 0 2 334,184, 0,335, +,+, 469539 LINE CR1 1057 chr4 61969623 61970210 CR1-C4 598 + 61969623 61970210 0 2 349,238, 0,349, +,+, 469559 LINE CR1 1057 chr4 61981255 61981658 CR1-X1 568 - 61981255 61981658 0 2 73,330, 0,73, -,-, 469570 LINE CR1 1057 chr4 61994321 61994761 GGLTR5B 214 - 61994321 61994761 0 2 111,186, 0,254, -,-, 469583 LTR ERVL 1058 chr4 62006385 62007591 CR1-D 398 + 62006385 62007591 0 2 321,878, 0,328, +,+, 469592 LINE CR1 1058 chr4 62027008 62027805 GGERV30_LTR 784 + 62027008 62027805 0 2 258,34, 0,763, +,+, 469602 LTR ERVL 1058 chr4 62035785 62036495 GGLTR5B 282 - 62035785 62036495 0 2 199,374, 0,336, -,-, 469604 LTR ERVL 1059 chr4 62214566 62214859 CR1-Y2_Aves 386 - 62214566 62214859 0 2 178,115, 0,178, -,-, 469684 LINE CR1 1060 chr4 62332815 62333775 CR1-C 818 + 62332815 62333775 0 2 210,750, 0,210, +,+, 469768 LINE CR1 1060 chr4 62338762 62340607 CR1-G 864 + 62338762 62340607 0 2 341,1148, 0,697, +,+, 469771 LINE CR1 1060 chr4 62344156 62345738 CR1-C4 581 + 62344156 62345738 0 2 1195,387, 0,1195, +,+, 469774 LINE CR1 1060 chr4 62357929 62358650 CR1-Y2_Aves 200 - 62357929 62358650 0 2 211,163, 0,558, -,-, 469782 LINE CR1 1060 chr4 62382858 62384105 CR1-Y4 235 + 62382858 62384105 0 2 226,396, 0,851, +,+, 469794 LINE CR1 1061 chr4 62417196 62418908 Charlie12_GG 504 - 62417196 62418908 0 3 1047,199,411, 0,1076,1301, -,-,-, 469821 DNA hAT-Charlie 1061 chr4 62486477 62486516 (AAGTGAA)n 522 + 62486477 62486516 0 2 11,7, 0,32, +,+, 469878 Simple_repeat Simple_repeat 1062 chr4 62605782 62606366 CR1-F2 588 - 62605782 62606366 0 2 117,467, 0,117, -,-, 469976 LINE CR1 1062 chr4 62607508 62608231 ENS1-LTR 401 - 62607508 62608231 0 2 390,322, 0,401, -,-, 469978 LTR ERVL 1062 chr4 62642197 62642720 GGLTR3F2 516 + 62642197 62642720 0 2 231,239, 0,284, +,+, 470009 LTR ERVL 1063 chr4 62705418 62705498 CR1-H 858 + 62705418 62705498 0 2 50,30, 0,50, +,+, 470069 LINE CR1 1063 chr4 62779611 62780770 CR1-H 821 + 62779611 62780770 0 2 185,974, 0,185, +,+, 470115 LINE CR1 1064 chr4 62805193 62806140 Mariner1_GG 593 - 62805193 62806140 0 2 487,141, 0,806, -,-, 470135 DNA TcMar-Mariner 1064 chr4 62884213 62885283 CR1-C4 514 + 62884213 62885283 0 2 576,494, 0,576, +,+, 470189 LINE CR1 1064 chr4 62900887 62902877 CR1-E 662 - 62900887 62902877 0 2 1838,101, 0,1889, -,-, 470205 LINE CR1 1065 chr4 62979822 62979964 (AT)n 688 + 62979822 62979964 0 2 33,51, 0,91, +,+, 470239 Simple_repeat Simple_repeat 1065 chr4 63002323 63002751 CR1-L3B_Croc 217 - 63002323 63002751 0 2 128,169, 0,259, -,-, 470259 LINE CR1 1065 chr4 63007941 63008436 CR1-B2 239 + 63007941 63008436 0 2 37,324, 0,171, +,+, 470263 LINE CR1 1065 chr4 63023720 63024624 Mariner1_GG 646 - 63023720 63024624 0 2 739,165, 0,739, -,-, 470277 DNA TcMar-Mariner 1066 chr4 63066919 63069180 CR1-F2 558 - 63066919 63069180 0 3 109,536,733, 0,188,1528, -,-,-, 470302 LINE CR1 1066 chr4 63067659 63068447 GGLTR12C 477 + 63067659 63068447 0 2 107,248, 0,540, +,+, 470304 LTR ERVL 1066 chr4 63083883 63084141 Charlie12_GG 284 + 63083883 63084141 0 2 148,81, 0,177, +,+, 470318 DNA hAT-Charlie 1066 chr4 63098024 63098266 GGERVL18-LTR 78 - 63098024 63098266 0 2 34,84, 0,158, -,-, 470326 LTR ERVL 1066 chr4 63102055 63102180 A-rich 433 + 63102055 63102180 0 2 41,55, 0,70, +,+, 470329 Low_complexity Low_complexity 1066 chr4 63158064 63158703 GGLTR8B 289 + 63158064 63158703 0 2 408,125, 0,514, +,+, 470354 LTR ERVL 1066 chr4 63165456 63165499 G-rich 416 + 63165456 63165499 0 2 14,12, 0,31, +,+, 470356 Low_complexity Low_complexity 1067 chr4 63204110 63204169 (GTTTT)n 396 + 63204110 63204169 0 2 6,8, 0,51, +,+, 470380 Simple_repeat Simple_repeat 1069 chr4 63481889 63481952 (TTCT)n 488 + 63481889 63481952 0 2 31,6, 0,57, +,+, 470497 Simple_repeat Simple_repeat 1069 chr4 63515835 63518687 GGLTR7-int 550 - 63515835 63518687 0 5 61,250,214,165,610, 0,1328,1861,2075,2242, -,-,-,-,-, 470521 LTR ERV1 1070 chr4 63571212 63571411 CR1-F0 581 - 63571212 63571411 0 2 73,126, 0,73, -,-, 470550 LINE CR1 1070 chr4 63639726 63640255 GGLTR5A 446 - 63639726 63640255 0 2 71,421, 0,108, -,-, 470582 LTR ERVL 1072 chr4 63915527 63916028 CR1-L3B_Croc 238 - 63915527 63916028 0 2 182,155, 0,346, -,-, 470778 LINE CR1 1073 chr4 63972433 63972777 CR1-L3A_Croc 308 + 63972433 63972777 0 2 198,64, 0,280, +,+, 470812 LINE CR1 1074 chr4 64161503 64161954 CR1-L3B_Croc 324 + 64161503 64161954 0 2 356,76, 0,375, +,+, 470942 LINE CR1 1074 chr4 64203015 64203226 CR1-D 635 - 64203015 64203226 0 2 72,139, 0,72, -,-, 470969 LINE CR1 1074 chr4 64203223 64203953 CR1-C2 685 - 64203223 64203953 0 2 132,529, 0,201, -,-, 470970 LINE CR1 1075 chr4 64237704 64238757 CR1-Y4 793 + 64237704 64238757 0 2 94,959, 0,94, +,+, 470992 LINE CR1 1075 chr4 64325037 64325665 GGLTR11-int 479 - 64325037 64325665 0 2 218,127, 0,501, -,-, 471049 LTR ERV1 1075 chr4 64333908 64335359 CR1-C4 432 + 64333908 64335359 0 2 619,832, 0,619, +,+, 471052 LINE CR1 1075 chr4 64341503 64341972 CR1-Y2_Aves 343 - 64341503 64341972 0 2 126,343, 0,126, -,-, 471055 LINE CR1 1076 chr4 64358964 64359423 Char12Mar1_GG 642 - 64358964 64359423 0 2 101,296, 0,163, -,-, 471066 DNA hAT-Charlie 1076 chr4 64451831 64453010 CR1-G 762 - 64451831 64453010 0 2 887,292, 0,887, -,-, 471107 LINE CR1 1076 chr4 64466633 64467075 CR1-C 807 + 64466633 64467075 0 2 263,178, 0,264, +,+, 471114 LINE CR1 1078 chr4 64620714 64621372 CR1-L3A_Croc 258 - 64620714 64621372 0 2 169,125, 0,533, -,-, 471243 LINE CR1 1078 chr4 64720189 64721183 CR1-B2 497 + 64720189 64721183 0 2 197,461, 0,533, +,+, 471309 LINE CR1 1079 chr4 64766778 64767421 Mariner1_GG 633 - 64766778 64767421 0 2 469,174, 0,469, -,-, 471332 DNA TcMar-Mariner 1079 chr4 64855250 64855397 (TTCTCT)n 284 + 64855250 64855397 0 2 16,6, 0,141, +,+, 471405 Simple_repeat Simple_repeat 1080 chr4 64896171 64902286 Char12Mar1_GG 481 - 64896171 64902286 0 2 78,327, 0,5788, -,-, 471427 DNA hAT-Charlie 1080 chr4 65008428 65009399 CR1-D2 583 + 65008428 65009399 0 2 556,311, 0,660, +,+, 471470 LINE CR1 1081 chr4 65077423 65079281 CR1-E 214 - 65077423 65079281 0 2 1109,563, 0,1295, -,-, 471502 LINE CR1 1081 chr4 65102083 65102643 CR1-Y2_Aves 262 + 65102083 65102643 0 2 152,339, 0,221, +,+, 471519 LINE CR1 1082 chr4 65212580 65212832 GGLTR5A 555 - 65212580 65212832 0 2 41,201, 0,51, -,-, 471568 LTR ERVL 1083 chr4 65342644 65343175 CR1-Y1_Aves 555 - 65342644 65343175 0 2 62,371, 0,160, -,-, 471636 LINE CR1 1083 chr4 65373695 65373734 (ATAC)n 402 + 65373695 65373734 0 2 6,14, 0,25, +,+, 471655 Simple_repeat Simple_repeat 1084 chr4 65503670 65503759 (TTTGTT)n 444 + 65503670 65503759 0 2 41,21, 0,68, +,+, 471732 Simple_repeat Simple_repeat 1084 chr4 65534118 65535274 REP131 193 - 65534118 65535274 0 3 126,159,454, 0,338,702, -,-,-, 471750 DNA? DNA? 1090 chr4 66213712 66214631 CR1-D2 734 + 66213712 66214631 0 2 376,382, 0,537, +,+, 472062 LINE CR1 1090 chr4 66254439 66255241 CR1-L3B_Croc 274 - 66254439 66255241 0 2 117,106, 0,696, -,-, 472081 LINE CR1 1090 chr4 66296137 66296834 GGLTR3F2 939 - 66296137 66296834 0 2 451,41, 0,656, -,-, 472104 LTR ERVL 1091 chr4 66340854 66341232 CR1-11_Crp 154 - 66340854 66341232 0 2 170,161, 0,217, -,-, 472121 LINE CR1 1093 chr4 66710434 66710590 G-rich 504 + 66710434 66710590 0 2 62,34, 0,122, +,+, 472273 Low_complexity Low_complexity 1094 chr4 66818791 66819556 Charlie12_GG 571 - 66818791 66819556 0 2 582,183, 0,582, -,-, 472322 DNA hAT-Charlie 1095 chr4 66876721 66877376 CR1-F2 493 + 66876721 66877376 0 2 305,347, 0,308, +,+, 472351 LINE CR1 1095 chr4 66881222 66882126 CR1-F2 502 + 66881222 66882126 0 2 427,420, 0,484, +,+, 472354 LINE CR1 1096 chr4 67045866 67046302 CR1-11_Crp 316 + 67045866 67046302 0 2 120,137, 0,299, +,+, 472444 LINE CR1 1096 chr4 67097730 67098646 GGLTR8B 128 - 67097730 67098646 0 2 404,483, 0,433, -,-, 472478 LTR ERVL 1097 chr4 67129744 67130353 CR1-X2 468 + 67129744 67130353 0 2 435,174, 0,435, +,+, 472502 LINE CR1 1097 chr4 67139639 67141863 CR1-X2 469 - 67139639 67141863 0 6 315,196,116,435,866,239, 0,347,568,684,1119,1985, -,-,-,-,-,-, 472512 LINE CR1 1098 chr4 67286888 67287495 CR1-E 654 + 67286888 67287495 0 2 309,298, 0,309, +,+, 472576 LINE CR1 1098 chr4 67315315 67315736 CR1-Y1_Aves 410 + 67315315 67315736 0 2 85,336, 0,85, +,+, 472594 LINE CR1 1099 chr4 67389815 67390339 Char12Mar1_GG 664 - 67389815 67390339 0 2 159,339, 0,185, -,-, 472636 DNA hAT-Charlie 1100 chr4 67554124 67554920 CR1-Y2_Aves 286 + 67554124 67554920 0 2 411,366, 0,430, +,+, 472738 LINE CR1 137 chr4 67764208 67764259 (TTTG)n 546 + 67764208 67764259 0 2 12,7, 0,44, +,+, 472879 Simple_repeat Simple_repeat 1102 chr4 67771849 67772009 GGLTR3B2 780 - 67771849 67772009 0 2 124,36, 0,124, -,-, 472888 LTR ERVL 1102 chr4 67880790 67881710 CR1-C4 478 + 67880790 67881710 0 2 443,450, 0,470, +,+, 472962 LINE CR1 1103 chr4 67898069 67898444 CR1-Y2_Aves 116 - 67898069 67898444 0 2 209,84, 0,291, -,-, 472976 LINE CR1 1103 chr4 67942851 67942935 (CTTTT)n 296 + 67942851 67942935 0 2 9,36, 0,48, +,+, 472991 Simple_repeat Simple_repeat 1103 chr4 68010144 68010779 CR1-C2 678 - 68010144 68010779 0 2 361,274, 0,361, -,-, 473038 LINE CR1 1104 chr4 68035643 68036162 TguLTR5e 274 + 68035643 68036162 0 2 271,229, 0,290, +,+, 473046 LTR ERVL 1105 chr4 68173487 68174007 CR1-Y2_Aves 343 + 68173487 68174007 0 2 330,85, 0,435, +,+, 473127 LINE CR1 1105 chr4 68236019 68236462 CR1-F 830 - 68236019 68236462 0 2 313,130, 0,313, -,-, 473173 LINE CR1 1105 chr4 68268138 68268529 CR1-L3B_Croc 191 + 68268138 68268529 0 2 213,161, 0,230, +,+, 473196 LINE CR1 1106 chr4 68291467 68292488 CR1-L3B_Croc 222 + 68291467 68292488 0 2 384,82, 0,939, +,+, 473208 LINE CR1 1106 chr4 68314471 68314896 Char12Mar1_GG 525 - 68314471 68314896 0 2 153,272, 0,153, -,-, 473224 DNA hAT-Charlie 1106 chr4 68331321 68331731 CR1-H 737 - 68331321 68331731 0 2 143,267, 0,143, -,-, 473234 LINE CR1 1106 chr4 68389362 68389409 (TTTTGTT)n 488 + 68389362 68389409 0 2 15,6, 0,41, +,+, 473273 Simple_repeat Simple_repeat 1107 chr4 68492619 68493297 CR1-Y 722 - 68492619 68493297 0 2 514,93, 0,585, -,-, 473347 LINE CR1 1109 chr4 68685548 68686043 CR1-C2 332 - 68685548 68686043 0 2 144,127, 0,368, -,-, 473428 LINE CR1 1109 chr4 68724989 68726063 CR1-L3B_Croc 195 - 68724989 68726063 0 2 303,554, 0,520, -,-, 473446 LINE CR1 1110 chr4 68913659 68913765 (T)n 717 + 68913659 68913765 0 2 19,36, 0,70, +,+, 473544 Simple_repeat Simple_repeat 1111 chr4 69000000 69000423 GGLTR8A 643 + 69000000 69000423 0 2 85,338, 0,85, +,+, 473569 LTR ERVL 1112 chr4 69135018 69135677 CR1-11_Crp 299 - 69135018 69135677 0 3 113,81,321, 0,126,338, -,-,-, 473623 LINE CR1 1112 chr4 69168818 69169064 TguLTR5e 415 - 69168818 69169064 0 2 102,121, 0,125, -,-, 473633 LTR ERVL 1113 chr4 69300433 69301240 REP131 344 - 69300433 69301240 0 2 99,163, 0,644, -,-, 473705 DNA? DNA? 1113 chr4 69314052 69317610 CR1-Y2 479 - 69314052 69317610 0 2 20,835, 0,2723, -,-, 473712 LINE CR1 1114 chr4 69466269 69466315 (AACA)n 580 + 69466269 69466315 0 2 11,11, 0,35, +,+, 473786 Simple_repeat Simple_repeat 1115 chr4 69506286 69506350 (GGAGC)n 470 + 69506286 69506350 0 2 6,18, 0,46, +,+, 473814 Simple_repeat Simple_repeat 1115 chr4 69570320 69571096 CR1-X2 565 + 69570320 69571096 0 2 232,204, 0,572, +,+, 473855 LINE CR1 1116 chr4 69620494 69620970 CR1-D2 654 - 69620494 69620970 0 2 229,247, 0,229, -,-, 473876 LINE CR1 1116 chr4 69621059 69621787 CR1-Y1_Aves 242 - 69621059 69621787 0 2 128,446, 0,282, -,-, 473877 LINE CR1 1118 chr4 69914875 69914979 (TTTTC)n 384 + 69914875 69914979 0 2 17,34, 0,70, +,+, 473995 Simple_repeat Simple_repeat 1119 chr4 70019235 70020100 CR1-E 640 + 70019235 70020100 0 2 284,581, 0,284, +,+, 474044 LINE CR1 1119 chr4 70021460 70021987 CR1-11_Crp 168 - 70021460 70021987 0 2 125,317, 0,210, -,-, 474047 LINE CR1 1119 chr4 70044073 70045179 CR1-L3A_Croc 206 - 70044073 70045179 0 2 551,276, 0,830, -,-, 474061 LINE CR1 1119 chr4 70073808 70075685 CR1-Y3 248 - 70073808 70075685 0 4 14,13,181,121, 0,100,1468,1756, -,-,-,-, 474080 LINE CR1 1119 chr4 70104549 70104890 CR1-Y2 105 + 70104549 70104890 0 2 39,302, 0,39, +,+, 474102 LINE CR1 1120 chr4 70167331 70167711 GGERV22_LTR 610 + 70167331 70167711 0 2 175,205, 0,175, +,+, 474124 LTR ERVL 1120 chr4 70193663 70194903 CR1-Y2_Aves 474 + 70193663 70194903 0 2 96,132, 0,1108, +,+, 474133 LINE CR1 1120 chr4 70202302 70203542 CR1-Y2_Aves 477 + 70202302 70203542 0 2 96,133, 0,1107, +,+, 474139 LINE CR1 1121 chr4 70266325 70266497 GGLTR5B 655 - 70266325 70266497 0 2 46,126, 0,46, -,-, 474172 LTR ERVL 1121 chr4 70326430 70326777 CR1-C3 663 + 70326430 70326777 0 2 284,55, 0,292, +,+, 474201 LINE CR1 1121 chr4 70326779 70327814 Mariner1_GG 603 - 70326779 70327814 0 2 378,654, 0,381, -,-, 474202 DNA TcMar-Mariner 1121 chr4 70378443 70379496 CR1-D2 684 - 70378443 70379496 0 2 536,117, 0,936, -,-, 474218 LINE CR1 1122 chr4 70423211 70423985 REP131 133 - 70423211 70423985 0 2 132,447, 0,327, -,-, 474240 DNA? DNA? 1122 chr4 70477911 70478205 CR1-Y4 489 - 70477911 70478205 0 2 163,131, 0,163, -,-, 474259 LINE CR1 1123 chr4 70538150 70538628 Char12Mar1_GG 632 - 70538150 70538628 0 2 259,198, 0,280, -,-, 474314 DNA hAT-Charlie 1123 chr4 70549331 70553612 CR1-F2 482 + 70549331 70553612 0 2 127,77, 0,4204, +,+, 474317 LINE CR1 1123 chr4 70573382 70573700 CR1-D2 498 + 70573382 70573700 0 2 76,215, 0,103, +,+, 474338 LINE CR1 1123 chr4 70612400 70612690 CR1-L3A_Croc 426 - 70612400 70612690 0 2 150,140, 0,150, -,-, 474372 LINE CR1 1124 chr4 70698851 70699811 REP131 217 - 70698851 70699811 0 2 218,133, 0,827, -,-, 474430 DNA? DNA? 1124 chr4 70713001 70713121 CR1-C 621 - 70713001 70713121 0 2 91,29, 0,91, -,-, 474438 LINE CR1 1124 chr4 70714712 70715125 Char12Mar1_GG 698 - 70714712 70715125 0 2 120,255, 0,158, -,-, 474440 DNA hAT-Charlie 1124 chr4 70735607 70736225 CR1-E 570 - 70735607 70736225 0 2 107,258, 0,360, -,-, 474453 LINE CR1 1124 chr4 70751495 70753250 CR1-Y2_Aves 158 - 70751495 70753250 0 3 460,100,655, 0,489,1100, -,-,-, 474464 LINE CR1 1125 chr4 70780317 70780402 (T)n 644 + 70780317 70780402 0 2 24,32, 0,53, +,+, 474492 Simple_repeat Simple_repeat 1125 chr4 70810272 70810330 (TATACA)n 448 + 70810272 70810330 0 2 15,8, 0,50, +,+, 474517 Simple_repeat Simple_repeat 1125 chr4 70852240 70853202 CR1-Y2_Aves 192 - 70852240 70853202 0 2 584,291, 0,671, -,-, 474554 LINE CR1 1125 chr4 70861459 70863043 CR1-C 759 + 70861459 70863043 0 2 574,662, 0,922, +,+, 474561 LINE CR1 1125 chr4 70863197 70863548 CR1-D2 284 + 70863197 70863548 0 2 111,157, 0,194, +,+, 474564 LINE CR1 1125 chr4 70874014 70874594 CR1-Y2_Aves 248 + 70874014 70874594 0 2 85,464, 0,116, +,+, 474576 LINE CR1 1126 chr4 70920086 70920745 GGLTR3D 576 + 70920086 70920745 0 2 208,418, 0,241, +,+, 474612 LTR ERVL 1126 chr4 70927751 70928735 CR1-D2 600 - 70927751 70928735 0 2 134,850, 0,134, -,-, 474618 LINE CR1 1126 chr4 71028773 71029174 GGLTR3C2 504 + 71028773 71029174 0 2 202,199, 0,202, +,+, 474692 LTR ERVL 1127 chr4 71061968 71062528 GGLTR8B 609 - 71061968 71062528 0 2 36,500, 0,60, -,-, 474711 LTR ERVL 1127 chr4 71078144 71078215 (T)n 779 + 71078144 71078215 0 2 18,32, 0,39, +,+, 474724 Simple_repeat Simple_repeat 1127 chr4 71099029 71100098 CR1-E 334 + 71099029 71100098 0 2 587,482, 0,587, +,+, 474742 LINE CR1 1127 chr4 71131956 71132539 Char12Mar1_GG 659 - 71131956 71132539 0 2 271,310, 0,273, -,-, 474762 DNA hAT-Charlie 1127 chr4 71137726 71142827 CR1-D2 320 + 71137726 71142827 0 3 449,157,235, 0,1474,4866, +,+,+, 474765 LINE CR1 1127 chr4 71140097 71142540 CR1-F2 636 + 71140097 71142540 0 2 354,418, 0,2025, +,+, 474768 LINE CR1 1127 chr4 71143385 71144433 CR1-D 695 + 71143385 71144433 0 2 555,493, 0,555, +,+, 474771 LINE CR1 1128 chr4 71201723 71201958 CR1-Y3 659 - 71201723 71201958 0 2 107,128, 0,107, -,-, 474817 LINE CR1 1128 chr4 71285920 71286496 CR1-Y2_Aves 259 - 71285920 71286496 0 2 448,113, 0,463, -,-, 474881 LINE CR1 1129 chr4 71313226 71314160 CR1-D2 534 + 71313226 71314160 0 2 344,590, 0,344, +,+, 474898 LINE CR1 1129 chr4 71325682 71326122 CR1-Y2_Aves 373 + 71325682 71326122 0 2 180,211, 0,229, +,+, 474908 LINE CR1 1129 chr4 71384358 71384572 CR1-F 638 - 71384358 71384572 0 2 159,55, 0,159, -,-, 474956 LINE CR1 1129 chr4 71405905 71406541 GGERVL-C-int 521 + 71405905 71406541 0 2 113,523, 0,113, +,+, 474989 LTR ERVL 1129 chr4 71413076 71413483 CR1-Y1_Aves 432 + 71413076 71413483 0 2 193,214, 0,193, +,+, 474993 LINE CR1 1130 chr4 71447188 71448340 GGLTR5A 377 - 71447188 71448340 0 2 103,229, 0,923, -,-, 475031 LTR ERVL 1130 chr4 71545091 71545405 CR1-Y1_Aves 366 - 71545091 71545405 0 2 171,143, 0,171, -,-, 475128 LINE CR1 1130 chr4 71546879 71550571 CR1-F 921 - 71546879 71550571 0 2 2284,710, 0,2982, -,-, 475131 LINE CR1 1130 chr4 71549167 71549861 GGLTR3A 841 - 71549167 71549861 0 3 42,187,366, 0,42,328, -,-,-, 475132 LTR ERVL 1130 chr4 71553510 71555224 CR1-C 848 + 71553510 71555224 0 2 1142,572, 0,1142, +,+, 475137 LINE CR1 1131 chr4 71570844 71572966 CR1-C2 835 + 71570844 71572966 0 2 1543,579, 0,1543, +,+, 475149 LINE CR1 1131 chr4 71576548 71579775 Char12Mar1_GG 517 - 71576548 71579775 0 2 192,164, 0,3063, -,-, 475157 DNA hAT-Charlie 1131 chr4 71578146 71579076 CR1-E 733 + 71578146 71579076 0 2 156,128, 0,802, +,+, 475159 LINE CR1 1131 chr4 71589101 71591207 CR1-B2 579 - 71589101 71591207 0 2 52,1756, 0,350, -,-, 475174 LINE CR1 1131 chr4 71593930 71596221 CR1-C2 829 - 71593930 71596221 0 2 564,1727, 0,564, -,-, 475178 LINE CR1 1131 chr4 71605578 71605796 CR1-Y1_Aves 440 + 71605578 71605796 0 2 112,101, 0,117, +,+, 475194 LINE CR1 1131 chr4 71636376 71637898 GGLTR5A 223 - 71636376 71637898 0 2 220,343, 0,1179, -,-, 475220 LTR ERVL 1131 chr4 71636602 71637555 ENS1B-LTR 500 + 71636602 71637555 0 2 463,474, 0,479, +,+, 475221 LTR ERVL 1131 chr4 71647296 71648472 CR1-Y4 583 + 71647296 71648472 0 2 59,235, 0,941, +,+, 475229 LINE CR1 1131 chr4 71667964 71669437 CR1-Y3 521 + 71667964 71669437 0 3 192,273,973, 0,227,500, +,+,+, 475250 LINE CR1 1132 chr4 71703236 71703618 GGLTR4A 627 - 71703236 71703618 0 2 118,243, 0,139, -,-, 475280 LTR ERVL 1132 chr4 71707132 71707440 GGLTR3B2 619 + 71707132 71707440 0 2 246,46, 0,262, +,+, 475285 LTR ERVL 1132 chr4 71738789 71740052 CR1-C 824 - 71738789 71740052 0 2 1090,173, 0,1090, -,-, 475316 LINE CR1 1132 chr4 71755308 71755549 CR1-X2 503 + 71755308 71755549 0 2 99,90, 0,151, +,+, 475341 LINE CR1 1132 chr4 71773283 71773525 CR1-X2 508 + 71773283 71773525 0 2 94,90, 0,152, +,+, 475361 LINE CR1 1132 chr4 71779366 71782366 CR1-E 681 - 71779366 71782366 0 2 370,336, 0,2664, -,-, 475375 LINE CR1 1132 chr4 71779735 71782036 CR1-C 805 - 71779735 71782036 0 2 500,1801, 0,500, -,-, 475376 LINE CR1 1132 chr4 71791809 71792349 ENS1B-LTR 561 + 71791809 71792349 0 2 192,348, 0,192, +,+, 475385 LTR ERVL 1132 chr4 71799876 71802009 CR1-F2 531 + 71799876 71802009 0 2 915,379, 0,1754, +,+, 475392 LINE CR1 1133 chr4 71832112 71833788 CR1-D2 327 - 71832112 71833788 0 3 76,291,159, 0,228,1517, -,-,-, 475423 LINE CR1 1133 chr4 71832277 71832340 (TTACTT)n 380 + 71832277 71832340 0 2 10,15, 0,48, +,+, 475424 Simple_repeat Simple_repeat 1133 chr4 71836389 71837536 CR1-D2 509 - 71836389 71837536 0 3 755,70,61, 0,957,1086, -,-,-, 475429 LINE CR1 1133 chr4 71856734 71857452 CR1-F2 605 - 71856734 71857452 0 2 188,430, 0,288, -,-, 475452 LINE CR1 1133 chr4 71877030 71882191 CR1-F 830 - 71877030 71882191 0 3 2402,1819,86, 0,3209,5075, -,-,-, 475482 LINE CR1 1133 chr4 71887460 71888316 CR1-C2 888 - 71887460 71888316 0 2 186,107, 0,749, -,-, 475489 LINE CR1 1133 chr4 71919068 71919946 GGLTR3A 847 + 71919068 71919946 0 2 410,123, 0,755, +,+, 475523 LTR ERVL 1133 chr4 71937272 71937975 GGLTR12C 381 + 71937272 71937975 0 2 91,249, 0,454, +,+, 475540 LTR ERVL 1133 chr4 71951211 71951336 Char12Mar1_GG 503 - 71951211 71951336 0 2 71,46, 0,79, -,-, 475555 DNA hAT-Charlie 1134 chr4 71959613 71960034 Char12Mar1_GG 626 - 71959613 71960034 0 2 245,171, 0,250, -,-, 475566 DNA hAT-Charlie 1134 chr4 71980963 71982222 CR1-D2 477 + 71980963 71982222 0 2 841,418, 0,841, +,+, 475590 LINE CR1 1134 chr4 72003548 72005100 GGLTR8B 262 + 72003548 72005100 0 3 182,110,94, 0,449,1458, +,+,+, 475617 LTR ERVL 1134 chr4 72032516 72033436 CR1-Y2_Aves 123 + 72032516 72033436 0 2 168,478, 0,442, +,+, 475639 LINE CR1 1134 chr4 72072495 72074200 CR1-D2 603 - 72072495 72074200 0 2 878,827, 0,878, -,-, 475670 LINE CR1 1134 chr4 72085257 72085840 CR1-C4 495 - 72085257 72085840 0 2 448,135, 0,448, -,-, 475682 LINE CR1 1135 chr4 72116491 72117414 CR1-Y4 414 - 72116491 72117414 0 2 345,571, 0,352, -,-, 475718 LINE CR1 1135 chr4 72120838 72121848 Mariner1_GG 453 - 72120838 72121848 0 3 186,47,679, 0,228,331, -,-,-, 475720 DNA TcMar-Mariner 1136 chr4 72231875 72232494 Char12Mar1_GG 476 + 72231875 72232494 0 2 390,189, 0,430, +,+, 475813 DNA hAT-Charlie 1136 chr4 72250524 72251862 CR1-Y4 326 + 72250524 72251862 0 2 855,483, 0,855, +,+, 475827 LINE CR1 1137 chr4 72381226 72385843 ENS1-LTR 950 - 72381226 72385843 0 3 913,2791,913, 0,913,3704, -,-,-, 475943 LTR ERVL 1137 chr4 72421037 72421475 CR1-Y2_Aves 130 - 72421037 72421475 0 2 270,105, 0,333, -,-, 475969 LINE CR1 1137 chr4 72426210 72426348 A-rich 394 + 72426210 72426348 0 2 16,11, 0,127, +,+, 475972 Low_complexity Low_complexity 1137 chr4 72449104 72450510 Mariner1_GG 572 - 72449104 72450510 0 3 430,110,73, 0,610,1333, -,-,-, 475998 DNA TcMar-Mariner 1137 chr4 72460757 72463565 CR1-Y 655 + 72460757 72463565 0 2 142,117, 0,2691, +,+, 476016 LINE CR1 1137 chr4 72470794 72471489 GGLTR5B 366 + 72470794 72471489 0 2 221,279, 0,416, +,+, 476023 LTR ERVL 1137 chr4 72479673 72480289 CR1-Y4 117 + 72479673 72480289 0 3 42,57,150, 0,258,466, +,+,+, 476043 LINE CR1 142 chr4 72482122 72484923 GGERVL18-int 630 - 72482122 72484923 0 4 117,1157,1184,333, 0,119,1276,2468, -,-,-,-, 476047 LTR ERVL 1138 chr4 72492282 72493058 CR1-Y2_Aves 162 + 72492282 72493058 0 2 547,192, 0,584, +,+, 476056 LINE CR1 1138 chr4 72531338 72539026 Char12Mar1_GG 624 - 72531338 72539026 0 2 549,46, 0,7642, -,-, 476103 DNA hAT-Charlie 1138 chr4 72536868 72538924 CR1-H 818 - 72536868 72538924 0 2 853,351, 0,1705, -,-, 476106 LINE CR1 1138 chr4 72586671 72588843 CR1-D2 591 - 72586671 72588843 0 2 274,171, 0,2001, -,-, 476138 LINE CR1 1138 chr4 72601347 72601772 Char12Mar1_GG 536 - 72601347 72601772 0 2 191,224, 0,201, -,-, 476154 DNA hAT-Charlie 1138 chr4 72610540 72612225 Charlie12_GG 500 - 72610540 72612225 0 2 987,218, 0,1467, -,-, 476162 DNA hAT-Charlie 1139 chr4 72641673 72645445 GGERVL18-LTR 718 + 72641673 72645445 0 3 145,3276,342, 0,154,3430, +,+,+, 476191 LTR ERVL 1139 chr4 72649661 72650243 CR1-C4 487 - 72649661 72650243 0 2 86,143, 0,439, -,-, 476193 LINE CR1 1139 chr4 72650305 72651150 GGLTR5B 716 - 72650305 72651150 0 2 38,475, 0,370, -,-, 476196 LTR ERVL 1139 chr4 72650350 72650677 GGERV10_LTR 629 - 72650350 72650677 0 2 160,62, 0,265, -,-, 476197 LTR ERVL 1139 chr4 72670429 72674444 CR1-G 759 - 72670429 72674444 0 2 1731,2281, 0,1734, -,-, 476212 LINE CR1 1139 chr4 72687045 72687878 CR1-Y4 374 + 72687045 72687878 0 2 303,303, 0,530, +,+, 476222 LINE CR1 1140 chr4 72761507 72761730 CR1-C4 684 - 72761507 72761730 0 2 189,34, 0,189, -,-, 476301 LINE CR1 1140 chr4 72768868 72769126 GGLTR5B 408 + 72768868 72769126 0 2 51,168, 0,90, +,+, 476306 LTR ERVL 1140 chr4 72831982 72832050 (GTTTTT)n 436 + 72831982 72832050 0 2 9,6, 0,62, +,+, 476357 Simple_repeat Simple_repeat 1140 chr4 72850060 72850345 CR1-C3 562 - 72850060 72850345 0 2 179,84, 0,201, -,-, 476379 LINE CR1 1140 chr4 72856514 72857129 CR1-D2 404 + 72856514 72857129 0 2 300,311, 0,304, +,+, 476384 LINE CR1 1141 chr4 72888134 72889995 GGERVL-B-int 395 + 72888134 72889995 0 4 211,673,111,97, 0,335,1058,1764, +,+,+,+, 476416 LTR ERVL 1141 chr4 72889303 72889898 GGLTR11 836 - 72889303 72889898 0 2 289,232, 0,363, -,-, 476418 LTR ERV1 1141 chr4 72890971 72891708 CR1-Y1_Aves 534 + 72890971 72891708 0 3 366,297,64, 0,366,673, +,+,+, 476422 LINE CR1 1141 chr4 72900868 72901536 CR1-D 651 - 72900868 72901536 0 2 137,486, 0,182, -,-, 476432 LINE CR1 1141 chr4 72967005 72980798 Char12Mar1_GG 528 - 72967005 72980798 0 2 136,138, 0,13655, -,-, 476457 DNA hAT-Charlie 1141 chr4 72981786 72983494 CR1-X2 132 + 72981786 72983494 0 2 465,922, 0,786, +,+, 476472 LINE CR1 1141 chr4 72982103 72982565 CR1-X 372 + 72982103 72982565 0 2 198,140, 0,322, +,+, 476473 LINE CR1 1141 chr4 72984173 72984697 GGLTR3B4 646 + 72984173 72984697 0 2 454,49, 0,475, +,+, 476478 LTR ERVL 1142 chr4 73035996 73037229 GGLTR8B 367 + 73035996 73037229 0 2 276,366, 0,867, +,+, 476531 LTR ERVL 1142 chr4 73057698 73059311 CR1-F2 577 + 73057698 73059311 0 2 299,186, 0,1427, +,+, 476543 LINE CR1 1142 chr4 73086733 73088435 CR1-C4 420 - 73086733 73088435 0 2 270,513, 0,1189, -,-, 476569 LINE CR1 1142 chr4 73089094 73089293 GGERVL-B-int 662 + 73089094 73089293 0 2 139,58, 0,141, +,+, 476572 LTR ERVL 1142 chr4 73109199 73109247 (ATTCTTT)n 452 + 73109199 73109247 0 2 6,11, 0,37, +,+, 476587 Simple_repeat Simple_repeat 142 chr4 73137635 73138319 CR1-Y 679 + 73137635 73138319 0 2 260,296, 0,388, +,+, 476616 LINE CR1 1143 chr4 73214671 73215344 CR1-E 467 + 73214671 73215344 0 2 157,515, 0,158, +,+, 476675 LINE CR1 1143 chr4 73222575 73222836 X2_LINE 277 + 73222575 73222836 0 2 125,96, 0,165, +,+, 476681 LINE CR1 1143 chr4 73253165 73254331 CR1-C4 369 - 73253165 73254331 0 2 440,428, 0,738, -,-, 476714 LINE CR1 1144 chr4 73276818 73278411 CR1-F2 806 - 73276818 73278411 0 3 476,515,599, 0,476,994, -,-,-, 476728 LINE CR1 1144 chr4 73288698 73290022 CR1-Y2_Aves 135 + 73288698 73290022 0 2 979,294, 0,1030, +,+, 476738 LINE CR1 1144 chr4 73292927 73293203 CR1-Y1_Aves 546 - 73292927 73293203 0 2 180,95, 0,181, -,-, 476742 LINE CR1 1144 chr4 73305504 73307439 CR1-F2 776 - 73305504 73307439 0 2 63,1872, 0,63, -,-, 476754 LINE CR1 1144 chr4 73334248 73334673 CR1-11_Crp 298 - 73334248 73334673 0 2 179,67, 0,358, -,-, 476768 LINE CR1 1144 chr4 73356217 73357246 CR1-11_Crp 353 + 73356217 73357246 0 2 85,220, 0,809, +,+, 476785 LINE CR1 1145 chr4 73412988 73413318 GGLTR8B 342 - 73412988 73413318 0 2 144,181, 0,149, -,-, 476833 LTR ERVL 1145 chr4 73488029 73489294 CR1-D 517 - 73488029 73489294 0 2 910,155, 0,1110, -,-, 476868 LINE CR1 1145 chr4 73503532 73504820 CR1-Y2_Aves 363 + 73503532 73504820 0 3 164,92,470, 0,166,818, +,+,+, 476883 LINE CR1 1146 chr4 73541695 73543267 CR1-Y2_Aves 241 + 73541695 73543267 0 2 1418,154, 0,1418, +,+, 476904 LINE CR1 1146 chr4 73544357 73547273 Mariner1_GG 496 - 73544357 73547273 0 2 566,662, 0,2254, -,-, 476905 DNA TcMar-Mariner 1147 chr4 73673585 73679545 CR1-Y4 537 + 73673585 73679545 0 3 24,318,86, 0,2709,5874, +,+,+, 476957 LINE CR1 1147 chr4 73676612 73677938 CR1-C 784 + 73676612 73677938 0 2 174,192, 0,1134, +,+, 476961 LINE CR1 1147 chr4 73679309 73679481 CR1-Y4 595 - 73679309 73679481 0 2 95,77, 0,95, -,-, 476964 LINE CR1 1147 chr4 73688882 73690494 CR1-C4 615 + 73688882 73690494 0 3 46,83,218, 0,560,1394, +,+,+, 476973 LINE CR1 1147 chr4 73688926 73689441 CR1-Y3 631 - 73688926 73689441 0 2 232,131, 0,384, -,-, 476974 LINE CR1 1147 chr4 73705729 73706356 CR1-Y1_Aves 349 - 73705729 73706356 0 2 317,104, 0,523, -,-, 476980 LINE CR1 1147 chr4 73791033 73791224 CR1-X2 548 - 73791033 73791224 0 2 144,47, 0,144, -,-, 477012 LINE CR1 1148 chr4 73824291 73824644 CR1-H2 922 + 73824291 73824644 0 2 270,83, 0,270, +,+, 477031 LINE CR1 1148 chr4 73906123 73907053 CR1-Y4 585 - 73906123 73907053 0 2 289,507, 0,423, -,-, 477064 LINE CR1 1149 chr4 74031970 74033870 CR1-X 463 - 74031970 74033870 0 2 1513,272, 0,1628, -,-, 477121 LINE CR1 1150 chr4 74180871 74182438 Char12Mar1_GG 593 - 74180871 74182438 0 2 666,525, 0,1042, -,-, 477198 DNA hAT-Charlie 1150 chr4 74181537 74181896 GGLTR4B 551 + 74181537 74181896 0 2 224,108, 0,251, +,+, 477199 LTR ERVL 1151 chr4 74302650 74302973 CR1-Y1_Aves 500 + 74302650 74302973 0 2 78,245, 0,78, +,+, 477244 LINE CR1 1153 chr4 74451567 74452338 CR1-D2 641 + 74451567 74452338 0 2 46,723, 0,48, +,+, 477308 LINE CR1 1153 chr4 74498205 74498434 CR1-Y1_Aves 622 - 74498205 74498434 0 2 114,115, 0,114, -,-, 477333 LINE CR1 1153 chr4 74551775 74551885 (T)n 533 + 74551775 74551885 0 2 43,40, 0,70, +,+, 477366 Simple_repeat Simple_repeat 1154 chr4 74648511 74649177 CR1-Y2_Aves 259 - 74648511 74649177 0 2 337,262, 0,404, -,-, 477416 LINE CR1 1154 chr4 74657772 74658349 CR1-Y2_Aves 244 + 74657772 74658349 0 2 368,202, 0,375, +,+, 477421 LINE CR1 1154 chr4 74662543 74663794 CR1-Y4 580 + 74662543 74663794 0 3 99,119,466, 0,446,785, +,+,+, 477424 LINE CR1 1155 chr4 74720356 74720756 CR1-D2 584 + 74720356 74720756 0 2 258,142, 0,258, +,+, 477459 LINE CR1 1155 chr4 74749836 74750579 CR1-F2 444 - 74749836 74750579 0 2 618,125, 0,618, -,-, 477486 LINE CR1 1155 chr4 74827120 74827952 Char12Mar1_GG 542 - 74827120 74827952 0 2 114,401, 0,431, -,-, 477527 DNA hAT-Charlie 1155 chr4 74829095 74829205 A-rich 563 + 74829095 74829205 0 2 34,34, 0,76, +,+, 477530 Low_complexity Low_complexity 1156 chr4 74901566 74907394 GGERV10_LTR 987 + 74901566 74907394 0 3 223,5384,220, 0,224,5608, +,+,+, 477568 LTR ERVL 1156 chr4 74939047 74940293 CR1-D2 602 + 74939047 74940293 0 2 882,45, 0,1201, +,+, 477583 LINE CR1 1156 chr4 74944334 74944473 (AT)n 653 + 74944334 74944473 0 2 52,35, 0,104, +,+, 477588 Simple_repeat Simple_repeat 1157 chr4 74995379 74996034 ENS1B-LTR 903 + 74995379 74996034 0 2 486,169, 0,486, +,+, 477626 LTR ERVL 1157 chr4 75003788 75004422 CR1-X2 520 - 75003788 75004422 0 2 74,560, 0,74, -,-, 477631 LINE CR1 1157 chr4 75011781 75012387 CR1-Y4 533 - 75011781 75012387 0 2 269,337, 0,269, -,-, 477637 LINE CR1 1157 chr4 75033837 75034151 GGLTR3C1 630 - 75033837 75034151 0 2 132,118, 0,196, -,-, 477652 LTR ERVL 1158 chr4 75224719 75224815 (TA)n 502 + 75224719 75224815 0 2 22,26, 0,70, +,+, 477763 Simple_repeat Simple_repeat 1159 chr4 75279427 75280255 CR1-L3B_Croc 209 - 75279427 75280255 0 2 102,217, 0,611, -,-, 477806 LINE CR1 1159 chr4 75284849 75285303 CR1-Y4 727 + 75284849 75285303 0 2 200,254, 0,200, +,+, 477814 LINE CR1 1159 chr4 75300203 75300466 CR1-Y2_Aves 380 - 75300203 75300466 0 2 78,152, 0,111, -,-, 477830 LINE CR1 1161 chr4 75502918 75503469 CR1-C3 790 - 75502918 75503469 0 2 94,54, 0,497, -,-, 477946 LINE CR1 1163 chr4 75800445 75800985 GGLTR8B 252 - 75800445 75800985 0 2 230,152, 0,388, -,-, 478111 LTR ERVL 1163 chr4 75801004 75801203 GGLTR5A 641 + 75801004 75801203 0 2 66,125, 0,74, +,+, 478112 LTR ERVL 1163 chr4 75888067 75889807 Char12Mar1_GG 512 - 75888067 75889807 0 2 994,76, 0,1664, -,-, 478184 DNA hAT-Charlie 1164 chr4 75939214 75940673 CR1-E 753 + 75939214 75940673 0 2 45,816, 0,643, +,+, 478226 LINE CR1 1164 chr4 75951745 75952189 Mariner1b_GG 662 - 75951745 75952189 0 2 242,201, 0,243, -,-, 478239 DNA TcMar-Mariner 1164 chr4 75959907 75960737 GGLTR3C2 453 - 75959907 75960737 0 2 106,461, 0,369, -,-, 478244 LTR ERVL 1165 chr4 76058083 76058774 ENS1B-LTR 861 + 76058083 76058774 0 2 625,66, 0,625, +,+, 478310 LTR ERVL 1165 chr4 76116502 76117178 CR1-X2 552 - 76116502 76117178 0 2 204,67, 0,609, -,-, 478359 LINE CR1 1166 chr4 76241537 76245969 ENS1B-LTR 769 + 76241537 76245969 0 3 813,2828,791, 0,813,3641, +,+,+, 478438 LTR ERVL 1167 chr4 76331044 76332109 CR1-L3B_Croc 347 - 76331044 76332109 0 2 270,112, 0,953, -,-, 478488 LINE CR1 1167 chr4 76339849 76341036 CR1-Y4 590 + 76339849 76341036 0 2 112,1075, 0,112, +,+, 478492 LINE CR1 1167 chr4 76380220 76380589 CR1-Y1_Aves 502 - 76380220 76380589 0 2 184,185, 0,184, -,-, 478514 LINE CR1 1167 chr4 76385932 76389978 CR1-E 614 - 76385932 76389978 0 2 152,284, 0,3762, -,-, 478515 LINE CR1 145 chr4 76414872 76415183 GGLTR8B 366 + 76414872 76415183 0 2 115,143, 0,168, +,+, 478532 LTR ERVL 1168 chr4 76445163 76445733 CR1-X2 618 - 76445163 76445733 0 2 141,429, 0,141, -,-, 478545 LINE CR1 1168 chr4 76448501 76448545 (CTTTTT)n 552 + 76448501 76448545 0 2 9,11, 0,33, +,+, 478548 Simple_repeat Simple_repeat 1168 chr4 76501917 76502451 CR1-Y3 604 + 76501917 76502451 0 2 379,75, 0,459, +,+, 478583 LINE CR1 1170 chr4 76678253 76682110 CR1-L3B_Croc 196 - 76678253 76682110 0 4 146,602,283,98, 0,2370,3141,3759, -,-,-,-, 478671 LINE CR1 1170 chr4 76688566 76692418 CR1-L3B_Croc 192 - 76688566 76692418 0 4 145,602,283,98, 0,2365,3136,3754, -,-,-,-, 478678 LINE CR1 1170 chr4 76793981 76794565 UCON8 119 - 76793981 76794565 0 2 274,266, 0,318, -,-, 478720 DNA DNA 1170 chr4 76798199 76798516 REP131 412 - 76798199 76798516 0 2 244,46, 0,271, -,-, 478724 DNA? DNA? 1171 chr4 76822724 76824738 CR1-L3B_Croc 176 - 76822724 76824738 0 2 676,370, 0,1644, -,-, 478740 LINE CR1 1171 chr4 76866724 76867403 CR1-L3B_Croc 169 + 76866724 76867403 0 2 434,149, 0,530, +,+, 478764 LINE CR1 1171 chr4 76880345 76881380 CR1-11_Crp 214 + 76880345 76881380 0 2 641,181, 0,854, +,+, 478772 LINE CR1 1172 chr4 76961727 76962332 GGLTR8A 509 - 76961727 76962332 0 2 350,120, 0,485, -,-, 478821 LTR ERVL 1174 chr4 77266450 77266983 GGLTR5A 445 + 77266450 77266983 0 2 276,145, 0,388, +,+, 478965 LTR ERVL 1175 chr4 77390974 77391612 CR1-F2 462 + 77390974 77391612 0 2 194,70, 0,568, +,+, 479025 LINE CR1 1175 chr4 77409011 77409620 CR1-C4 557 + 77409011 77409620 0 2 240,361, 0,248, +,+, 479032 LINE CR1 1176 chr4 77521886 77521938 (TGTT)n 548 + 77521886 77521938 0 2 26,7, 0,45, +,+, 479093 Simple_repeat Simple_repeat 1176 chr4 77576166 77576252 (CTGTCTG)n 340 + 77576166 77576252 0 2 16,24, 0,62, +,+, 479122 Simple_repeat Simple_repeat 1176 chr4 77586536 77588073 GGERV28_I-int 457 - 77586536 77588073 0 2 873,55, 0,1482, -,-, 479131 LTR ERVK 1177 chr4 77677963 77678008 (TATA)n 368 + 77677963 77678008 0 2 11,13, 0,32, +,+, 479191 Simple_repeat Simple_repeat 1177 chr4 77696052 77697724 CR1-G 835 - 77696052 77697724 0 2 778,677, 0,995, -,-, 479202 LINE CR1 1178 chr4 77799395 77800397 CR1-D2 561 + 77799395 77800397 0 2 210,792, 0,210, +,+, 479265 LINE CR1 1180 chr4 78011520 78011932 CR1-3_Croc 30 + 78011520 78011932 0 2 107,279, 0,133, +,+, 479417 LINE CR1 1180 chr4 78027413 78027991 CR1-H2 393 + 78027413 78027991 0 2 403,96, 0,482, +,+, 479423 LINE CR1 1180 chr4 78033886 78035263 CR1-E 426 - 78033886 78035263 0 2 1050,156, 0,1221, -,-, 479427 LINE CR1 1181 chr4 78122183 78122334 (TTCC)n 202 + 78122183 78122334 0 2 57,46, 0,105, +,+, 479474 Simple_repeat Simple_repeat 1181 chr4 78193492 78195222 Mariner1_GG 548 - 78193492 78195222 0 2 412,714, 0,1016, -,-, 479515 DNA TcMar-Mariner 1181 chr4 78225749 78226083 TguLTR5e 248 - 78225749 78226083 0 2 180,135, 0,199, -,-, 479542 LTR ERVL 1182 chr4 78257129 78257359 GGLTR8B 467 + 78257129 78257359 0 2 51,179, 0,51, +,+, 479556 LTR ERVL 1182 chr4 78300174 78300543 GGLTR4A 490 - 78300174 78300543 0 2 103,231, 0,138, -,-, 479583 LTR ERVL 1183 chr4 78407911 78408583 CR1-Y2_Aves 327 - 78407911 78408583 0 4 101,138,182,132, 0,102,354,540, -,-,-,-, 479657 LINE CR1 1183 chr4 78480294 78480537 CR1-C4 534 + 78480294 78480537 0 2 67,174, 0,69, +,+, 479704 LINE CR1 1184 chr4 78571748 78573595 CR1-D 664 + 78571748 78573595 0 2 340,1507, 0,340, +,+, 479765 LINE CR1 1184 chr4 78600988 78601707 CR1-X2 272 - 78600988 78601707 0 2 330,389, 0,330, -,-, 479785 LINE CR1 1184 chr4 78601708 78602147 CR1-Y2_Aves 477 + 78601708 78602147 0 2 293,61, 0,378, +,+, 479786 LINE CR1 1185 chr4 78647124 78647359 GGERVL18-LTR 653 + 78647124 78647359 0 2 93,116, 0,119, +,+, 479816 LTR ERVL 1185 chr4 78698076 78699112 CR1-Y2_Aves 154 - 78698076 78699112 0 2 319,573, 0,463, -,-, 479852 LINE CR1 1185 chr4 78753127 78753261 GGLTR5A 427 - 78753127 78753261 0 2 85,49, 0,85, -,-, 479896 LTR ERVL 1185 chr4 78762486 78762829 GGLTR5A 431 + 78762486 78762829 0 2 237,79, 0,264, +,+, 479909 LTR ERVL 1186 chr4 78778995 78779598 ENS1-LTR 966 - 78778995 78779598 0 2 169,434, 0,169, -,-, 479916 LTR ERVL 1187 chr4 78952440 78953013 CR1-D2 654 - 78952440 78953013 0 2 398,175, 0,398, -,-, 480001 LINE CR1 1187 chr4 78959499 78961241 CR1-C3 716 + 78959499 78961241 0 4 279,168,113,802, 0,659,827,940, +,+,+,+, 480004 LINE CR1 1187 chr4 78991911 78992248 CR1-D2 516 - 78991911 78992248 0 2 79,109, 0,228, -,-, 480030 LINE CR1 1190 chr4 79318300 79318646 CR1-D2 674 - 79318300 79318646 0 2 78,268, 0,78, -,-, 480194 LINE CR1 1190 chr4 79318378 79319112 CR1-D 424 - 79318378 79319112 0 3 27,389,76, 0,265,658, -,-,-, 480195 LINE CR1 1190 chr4 79407144 79408817 Char12Mar1_GG 526 - 79407144 79408817 0 2 640,767, 0,906, -,-, 480257 DNA hAT-Charlie 1191 chr4 79462356 79463229 CR1-Y2_Aves 269 - 79462356 79463229 0 2 175,325, 0,548, -,-, 480286 LINE CR1 1191 chr4 79510983 79511052 (TTTC)n 438 + 79510983 79511052 0 2 22,9, 0,60, +,+, 480323 Simple_repeat Simple_repeat 1192 chr4 79565242 79566432 CR1-F2 465 + 79565242 79566432 0 2 168,56, 0,1134, +,+, 480350 LINE CR1 1192 chr4 79565426 79566372 GGLTR7-int 454 - 79565426 79566372 0 3 325,397,57, 0,492,889, -,-,-, 480351 LTR ERV1 1193 chr4 79729680 79729804 A-rich 559 + 79729680 79729804 0 2 52,39, 0,85, +,+, 480438 Low_complexity Low_complexity 1195 chr4 80014426 80014973 CR1-X2 462 + 80014426 80014973 0 2 443,104, 0,443, +,+, 480578 LINE CR1 1195 chr4 80023767 80024662 Charlie12_GG 380 - 80023767 80024662 0 2 241,370, 0,525, -,-, 480583 DNA hAT-Charlie 1196 chr4 80093147 80094740 CR1-G 317 - 80093147 80094740 0 2 965,626, 0,967, -,-, 480633 LINE CR1 1196 chr4 80145554 80146165 GGLTR5B 655 + 80145554 80146165 0 2 359,186, 0,425, +,+, 480653 LTR ERVL 1196 chr4 80182757 80183731 CR1-X1 619 + 80182757 80183731 0 2 675,299, 0,675, +,+, 480667 LINE CR1 1197 chr4 80268149 80268473 CR1-X2 504 - 80268149 80268473 0 2 140,184, 0,140, -,-, 480707 LINE CR1 1197 chr4 80314163 80314664 CR1-Y4 548 + 80314163 80314664 0 2 166,335, 0,166, +,+, 480741 LINE CR1 1198 chr4 80393249 80393382 CR1-C2 856 - 80393249 80393382 0 2 99,34, 0,99, -,-, 480768 LINE CR1 1199 chr4 80506574 80506803 CR1-Y2_Aves 404 - 80506574 80506803 0 2 169,60, 0,169, -,-, 480808 LINE CR1 1199 chr4 80542248 80542756 TguLTR5e 456 - 80542248 80542756 0 2 144,206, 0,302, -,-, 480823 LTR ERVL 1199 chr4 80550097 80551407 CR1-Y2_Aves 162 + 80550097 80551407 0 2 267,723, 0,587, +,+, 480829 LINE CR1 1200 chr4 80645642 80646649 CR1-F2 644 + 80645642 80646649 0 2 239,765, 0,242, +,+, 480879 LINE CR1 1200 chr4 80700205 80700980 CR1-C4 655 - 80700205 80700980 0 2 394,379, 0,396, -,-, 480909 LINE CR1 1201 chr4 80771257 80771743 CR1-L3B_Croc 215 + 80771257 80771743 0 2 140,149, 0,337, +,+, 480942 LINE CR1 1201 chr4 80794297 80795861 CR1-L3B_Croc 206 - 80794297 80795861 0 2 178,677, 0,887, -,-, 480956 LINE CR1 1202 chr4 80882571 80883190 CR1-X1 633 + 80882571 80883190 0 2 303,50, 0,569, +,+, 481005 LINE CR1 1202 chr4 80930874 80932152 CR1-F 893 + 80930874 80932152 0 2 64,1214, 0,64, +,+, 481031 LINE CR1 1202 chr4 80979156 80979675 CR1-C4 528 - 80979156 80979675 0 2 316,203, 0,316, -,-, 481074 LINE CR1 1202 chr4 80982780 80983456 CR1-Y4 330 - 80982780 80983456 0 2 33,360, 0,316, -,-, 481077 LINE CR1 1204 chr4 81247881 81249975 CR1-F2 728 - 81247881 81249975 0 2 59,2035, 0,59, -,-, 481243 LINE CR1 1205 chr4 81380596 81382166 CR1-D2 549 + 81380596 81382166 0 2 181,66, 0,1504, +,+, 481331 LINE CR1 1205 chr4 81385522 81385869 CR1-H 866 + 81385522 81385869 0 2 283,64, 0,283, +,+, 481335 LINE CR1 1206 chr4 81521743 81522847 CR1-L3B_Croc 262 - 81521743 81522847 0 2 137,384, 0,720, -,-, 481415 LINE CR1 1207 chr4 81560095 81561854 CR1-C4 645 - 81560095 81561854 0 2 227,902, 0,857, -,-, 481430 LINE CR1 1211 chr4 82051738 82052962 GGERVL18-int 269 + 82051738 82052962 0 3 718,108,224, 0,857,1000, +,+,+, 481781 LTR ERVL 1211 chr4 82057380 82057435 (GTTT)n 476 + 82057380 82057435 0 2 15,8, 0,47, +,+, 481784 Simple_repeat Simple_repeat 1211 chr4 82076192 82076669 CR1-D2 663 - 82076192 82076669 0 2 61,416, 0,61, -,-, 481793 LINE CR1 1211 chr4 82112024 82112285 CR1-D2 707 - 82112024 82112285 0 2 144,117, 0,144, -,-, 481822 LINE CR1 1211 chr4 82130278 82130748 CR1-C4 490 + 82130278 82130748 0 2 207,263, 0,207, +,+, 481836 LINE CR1 1211 chr4 82155019 82155817 CR1-E 288 + 82155019 82155817 0 2 346,59, 0,739, +,+, 481852 LINE CR1 1211 chr4 82161226 82161274 (TTTCT)n 586 + 82161226 82161274 0 2 10,8, 0,40, +,+, 481858 Simple_repeat Simple_repeat 1211 chr4 82179645 82180037 GGLTR4A 650 + 82179645 82180037 0 2 234,93, 0,299, +,+, 481870 LTR ERVL 151 chr4 82181154 82183554 CR1-L3A_Croc 314 - 82181154 82183554 0 3 161,242,354, 0,1736,2046, -,-,-, 481873 LINE CR1 1212 chr4 82197905 82199065 CR1-D 725 - 82197905 82199065 0 2 903,253, 0,907, -,-, 481883 LINE CR1 1212 chr4 82224296 82224796 CR1-D2 618 + 82224296 82224796 0 2 402,98, 0,402, +,+, 481907 LINE CR1 1213 chr4 82423082 82423509 CR1-C4 550 - 82423082 82423509 0 2 51,339, 0,88, -,-, 482032 LINE CR1 1214 chr4 82491396 82492599 CR1-Y2_Aves 381 + 82491396 82492599 0 2 567,472, 0,731, +,+, 482066 LINE CR1 1215 chr4 82674109 82674225 CR1-C2 696 + 82674109 82674225 0 2 74,42, 0,74, +,+, 482151 LINE CR1 1215 chr4 82675175 82675424 CR1-X2 645 - 82675175 82675424 0 2 188,61, 0,188, -,-, 482152 LINE CR1 1215 chr4 82689625 82690460 Mariner1_GG 648 - 82689625 82690460 0 3 388,30,398, 0,388,437, -,-,-, 482159 DNA TcMar-Mariner 1215 chr4 82699617 82699793 CR1-Y2_Aves 564 + 82699617 82699793 0 2 60,103, 0,73, +,+, 482163 LINE CR1 1215 chr4 82699796 82701301 CR1-F2 547 + 82699796 82701301 0 3 560,449,326, 0,560,1179, +,+,+, 482164 LINE CR1 1216 chr4 82811491 82811547 (AGCACAC)n 446 + 82811491 82811547 0 2 15,7, 0,49, +,+, 482199 Simple_repeat Simple_repeat 1217 chr4 82920483 82923449 CR1-Y3 623 + 82920483 82923449 0 2 2439,406, 0,2560, +,+, 482257 LINE CR1 1217 chr4 82938128 82938931 CR1-Y4 659 - 82938128 82938931 0 2 302,258, 0,545, -,-, 482268 LINE CR1 1218 chr4 83082794 83083705 CR1-Y1_Aves 457 - 83082794 83083705 0 2 317,254, 0,657, -,-, 482329 LINE CR1 1218 chr4 83084115 83084554 CR1-Y3 431 - 83084115 83084554 0 2 92,298, 0,141, -,-, 482332 LINE CR1 1218 chr4 83091364 83092275 CR1-Y1_Aves 457 - 83091364 83092275 0 2 317,254, 0,657, -,-, 482334 LINE CR1 1219 chr4 83150127 83150702 CR1-E 762 - 83150127 83150702 0 2 472,103, 0,472, -,-, 482364 LINE CR1 1220 chr4 83278265 83282988 Char12Mar1_GG 653 - 83278265 83282988 0 2 345,136, 0,4587, -,-, 482409 DNA hAT-Charlie 1220 chr4 83305374 83305922 CR1-C4 657 + 83305374 83305922 0 3 169,283,90, 0,169,458, +,+,+, 482421 LINE CR1 1221 chr4 83364332 83364403 GA-rich 268 + 83364332 83364403 0 2 17,29, 0,42, +,+, 482447 Low_complexity Low_complexity 1221 chr4 83388028 83389609 CR1-C4 509 - 83388028 83389609 0 2 143,207, 0,1374, -,-, 482465 LINE CR1 1221 chr4 83454110 83454705 CR1-C4 540 + 83454110 83454705 0 2 177,232, 0,363, +,+, 482507 LINE CR1 1222 chr4 83594858 83596910 CR1-X2 386 + 83594858 83596910 0 2 398,68, 0,1984, +,+, 482580 LINE CR1 1223 chr4 83636284 83636727 CR1-X2 460 - 83636284 83636727 0 2 247,196, 0,247, -,-, 482618 LINE CR1 1223 chr4 83638373 83639111 CR1-Y1_Aves 464 - 83638373 83639111 0 2 182,405, 0,333, -,-, 482620 LINE CR1 1223 chr4 83677962 83678359 CR1-D2 680 - 83677962 83678359 0 2 221,172, 0,225, -,-, 482642 LINE CR1 1223 chr4 83685167 83685577 GGLTR5B 257 + 83685167 83685577 0 2 226,136, 0,274, +,+, 482651 LTR ERVL 1224 chr4 83842949 83844500 CR1-Y2_Aves 188 + 83842949 83844500 0 3 602,497,64, 0,693,1487, +,+,+, 482726 LINE CR1 1225 chr4 83926135 83926464 CR1-D2 583 - 83926135 83926464 0 2 182,147, 0,182, -,-, 482770 LINE CR1 1225 chr4 83941494 83941789 CR1-C4 645 + 83941494 83941789 0 2 98,197, 0,98, +,+, 482787 LINE CR1 1225 chr4 83968791 83968900 (TGTA)n 194 + 83968791 83968900 0 2 12,53, 0,56, +,+, 482800 Simple_repeat Simple_repeat 1229 chr4 84417409 84417860 CR1-F2 228 + 84417409 84417860 0 2 116,215, 0,236, +,+, 483089 LINE CR1 1229 chr4 84435632 84435908 CR1-Y4 656 + 84435632 84435908 0 2 137,125, 0,151, +,+, 483101 LINE CR1 1229 chr4 84445005 84445303 CR1-D2 628 - 84445005 84445303 0 2 198,75, 0,223, -,-, 483108 LINE CR1 1229 chr4 84504838 84505285 TguLTR5e 300 - 84504838 84505285 0 2 93,212, 0,235, -,-, 483150 LTR ERVL 1230 chr4 84634203 84634511 CR1-Y3 793 + 84634203 84634511 0 2 116,192, 0,116, +,+, 483202 LINE CR1 1230 chr4 84646876 84647760 CR1-C 868 - 84646876 84647760 0 2 580,304, 0,580, -,-, 483211 LINE CR1 1230 chr4 84653403 84654259 CR1-L3A_Croc 177 - 84653403 84654259 0 2 301,414, 0,442, -,-, 483212 LINE CR1 1231 chr4 84767484 84767910 CR1-F2 342 - 84767484 84767910 0 2 92,177, 0,249, -,-, 483280 LINE CR1 1231 chr4 84777134 84777930 CR1-C4 344 + 84777134 84777930 0 2 171,625, 0,171, +,+, 483285 LINE CR1 1232 chr4 84832460 84832939 GGLTR6 567 + 84832460 84832939 0 2 344,135, 0,344, +,+, 483325 LTR ERVL 1232 chr4 84848068 84851621 CR1-E 370 - 84848068 84851621 0 2 262,430, 0,3123, -,-, 483334 LINE CR1 1232 chr4 84903514 84905995 CR1-F2 565 - 84903514 84905995 0 2 1186,1295, 0,1186, -,-, 483363 LINE CR1 1233 chr4 84949195 84950572 CR1-C 858 - 84949195 84950572 0 2 417,960, 0,417, -,-, 483391 LINE CR1 1233 chr4 85013576 85013941 CR1-D2 659 + 85013576 85013941 0 2 65,100, 0,265, +,+, 483427 LINE CR1 1233 chr4 85050206 85051169 CR1-D 763 - 85050206 85051169 0 2 266,103, 0,860, -,-, 483439 LINE CR1 1234 chr4 85071510 85071899 Mariner1b_GG 660 + 85071510 85071899 0 2 17,335, 0,54, +,+, 483450 DNA TcMar-Mariner 1234 chr4 85081566 85081683 (TA)n 364 + 85081566 85081683 0 2 42,25, 0,92, +,+, 483457 Simple_repeat Simple_repeat 1234 chr4 85103342 85104039 CR1-Y2_Aves 280 - 85103342 85104039 0 2 149,546, 0,151, -,-, 483463 LINE CR1 1234 chr4 85190824 85194007 CR1-E 636 - 85190824 85194007 0 2 814,174, 0,3009, -,-, 483500 LINE CR1 1235 chr4 85211658 85211885 CR1-C4 573 - 85211658 85211885 0 2 158,69, 0,158, -,-, 483511 LINE CR1 1235 chr4 85212427 85212621 A-rich 134 + 85212427 85212621 0 2 90,85, 0,109, +,+, 483513 Low_complexity Low_complexity 1235 chr4 85232519 85232959 CR1-L3A_Croc 269 + 85232519 85232959 0 2 137,230, 0,210, +,+, 483526 LINE CR1 1235 chr4 85236436 85240009 CR1-F2 586 - 85236436 85240009 0 2 74,668, 0,2905, -,-, 483530 LINE CR1 1236 chr4 85397730 85398066 CR1-F2 310 + 85397730 85398066 0 2 95,220, 0,116, +,+, 483626 LINE CR1 1236 chr4 85423164 85423852 CR1-X2 305 + 85423164 85423852 0 3 233,144,200, 0,344,488, +,+,+, 483643 LINE CR1 1237 chr4 85503196 85503663 CR1-F2 397 - 85503196 85503663 0 3 54,242,109, 0,54,358, -,-,-, 483690 LINE CR1 1238 chr4 85682805 85684221 CR1-C 596 + 85682805 85684221 0 2 79,139, 0,1277, +,+, 483813 LINE CR1 1239 chr4 85776647 85776910 CR1-Y2_Aves 402 + 85776647 85776910 0 2 97,166, 0,97, +,+, 483866 LINE CR1 1240 chr4 85866986 85867187 UCON4 292 + 85866986 85867187 0 2 112,41, 0,160, +,+, 483934 Unknown Unknown 1241 chr4 85996688 85998339 CR1-Y2_Aves 171 - 85996688 85998339 0 3 424,406,551, 0,489,1100, -,-,-, 484045 LINE CR1 1242 chr4 86215819 86216233 CR1-Y3 750 + 86215819 86216233 0 2 168,245, 0,169, +,+, 484156 LINE CR1 1243 chr4 86261663 86262855 GGERVL18-int 565 + 86261663 86262855 0 3 113,761,215, 0,216,977, +,+,+, 484174 LTR ERVL 1243 chr4 86262855 86266182 GGERVL18-int 708 + 86262855 86266182 0 3 1449,1670,206, 0,1449,3121, +,+,+, 484176 LTR ERVL 1243 chr4 86270341 86270813 Char12Mar1_GG 514 - 86270341 86270813 0 2 299,170, 0,302, -,-, 484177 DNA hAT-Charlie 1243 chr4 86301774 86302337 CR1-C2 758 - 86301774 86302337 0 2 46,375, 0,188, -,-, 484194 LINE CR1 1243 chr4 86314003 86315220 GGERVL18-int 561 + 86314003 86315220 0 3 105,765,215, 0,237,1002, +,+,+, 484201 LTR ERVL 1243 chr4 86315220 86318541 GGERVL18-int 708 + 86315220 86318541 0 3 1449,1664,208, 0,1449,3113, +,+,+, 484204 LTR ERVL 1243 chr4 86322617 86323588 Char12Mar1_GG 340 - 86322617 86323588 0 2 657,314, 0,657, -,-, 484205 DNA hAT-Charlie 1243 chr4 86347232 86348085 Char12Mar1_GG 465 - 86347232 86348085 0 4 57,303,163,327, 0,60,363,526, -,-,-,-, 484211 DNA hAT-Charlie 1243 chr4 86367718 86368934 GGERVL18-int 579 + 86367718 86368934 0 3 113,764,187, 0,265,1029, +,+,+, 484220 LTR ERVL 1243 chr4 86368938 86372264 GGERVL18-int 715 + 86368938 86372264 0 3 1434,1670,206, 0,1449,3120, +,+,+, 484225 LTR ERVL 155 chr4 86376356 86377330 Charlie12_GGa 397 - 86376356 86377330 0 2 660,314, 0,660, -,-, 484226 DNA hAT-Charlie 1244 chr4 86483644 86485915 GGLTR11-int 217 + 86483644 86485915 0 3 195,158,734, 0,1155,1537, +,+,+, 484268 LTR ERV1 1244 chr4 86487642 86488485 CR1-G 832 + 86487642 86488485 0 2 472,365, 0,478, +,+, 484270 LINE CR1 1244 chr4 86500000 86500436 CR1-D 721 - 86500000 86500436 0 2 229,207, 0,229, -,-, 484278 LINE CR1 1246 chr4 86655547 86655627 (ACA)n 524 + 86655547 86655627 0 2 28,7, 0,73, +,+, 484372 Simple_repeat Simple_repeat 1246 chr4 86738315 86738594 CR1-X2 417 - 86738315 86738594 0 2 49,218, 0,61, -,-, 484427 LINE CR1 1246 chr4 86750237 86751361 CR1-C4 640 + 86750237 86751361 0 2 560,85, 0,1039, +,+, 484443 LINE CR1 1247 chr4 86860269 86860519 CR1-C4 581 + 86860269 86860519 0 2 185,65, 0,185, +,+, 484527 LINE CR1 1247 chr4 86884848 86884979 CR1-Y4 715 + 86884848 86884979 0 2 60,66, 0,65, +,+, 484543 LINE CR1 1249 chr4 87071570 87071934 CR1-Y4 492 + 87071570 87071934 0 2 147,217, 0,147, +,+, 484680 LINE CR1 1249 chr4 87133711 87134482 CR1-D2 654 - 87133711 87134482 0 2 154,617, 0,154, -,-, 484732 LINE CR1 1249 chr4 87136940 87137277 CR1-C4 480 - 87136940 87137277 0 2 220,117, 0,220, -,-, 484734 LINE CR1 1249 chr4 87141976 87142416 CR1-C 713 - 87141976 87142416 0 2 18,422, 0,18, -,-, 484741 LINE CR1 1250 chr4 87177969 87179202 CR1-Y2_Aves 330 - 87177969 87179202 0 2 1066,123, 0,1110, -,-, 484773 LINE CR1 1250 chr4 87209348 87210460 CR1-E 573 + 87209348 87210460 0 2 252,164, 0,948, +,+, 484798 LINE CR1 1250 chr4 87246495 87247217 CR1-D2 229 + 87246495 87247217 0 2 196,170, 0,552, +,+, 484828 LINE CR1 1251 chr4 87358680 87359038 GGLTR5A 503 + 87358680 87359038 0 2 168,190, 0,168, +,+, 484917 LTR ERVL 1252 chr4 87439314 87440161 GGLTR8B 529 + 87439314 87440161 0 3 112,264,224, 0,317,623, +,+,+, 484988 LTR ERVL 1252 chr4 87518994 87519405 Char12Mar1_GG 661 - 87518994 87519405 0 2 71,286, 0,125, -,-, 485055 DNA hAT-Charlie 1253 chr4 87613235 87614976 CR1-C 813 - 87613235 87614976 0 2 182,1557, 0,184, -,-, 485141 LINE CR1 1254 chr4 87698815 87699242 CR1-Y2_Aves 154 + 87698815 87699242 0 2 177,137, 0,290, +,+, 485197 LINE CR1 1254 chr4 87721105 87721163 (TTCT)n 524 + 87721105 87721163 0 2 19,9, 0,49, +,+, 485217 Simple_repeat Simple_repeat 1254 chr4 87738363 87739763 CR1-Y3 691 + 87738363 87739763 0 3 395,112,429, 0,635,971, +,+,+, 485233 LINE CR1 1254 chr4 87780304 87782187 CR1-Y 475 + 87780304 87782187 0 3 424,382,150, 0,424,1733, +,+,+, 485271 LINE CR1 1254 chr4 87788261 87788758 REP131 94 - 87788261 87788758 0 2 197,212, 0,285, -,-, 485280 DNA? DNA? 1254 chr4 87794347 87794813 CR1-Y2_Aves 521 + 87794347 87794813 0 2 42,49, 0,417, +,+, 485287 LINE CR1 1254 chr4 87808709 87808875 GGERVL-C-int 431 - 87808709 87808875 0 2 64,80, 0,86, -,-, 485303 LTR ERVL 1255 chr4 87859004 87859429 CR1-F0 269 + 87859004 87859429 0 3 15,13,282, 0,130,143, +,+,+, 485357 LINE CR1 1255 chr4 87906960 87908222 CR1-C 787 - 87906960 87908222 0 2 904,358, 0,904, -,-, 485402 LINE CR1 1255 chr4 87946036 87946289 CR1-Y3 793 - 87946036 87946289 0 2 106,141, 0,112, -,-, 485439 LINE CR1 1256 chr4 87972069 87972861 REP131 374 - 87972069 87972861 0 2 45,587, 0,205, -,-, 485455 DNA? DNA? 1256 chr4 87973027 87973466 CR1-D 585 - 87973027 87973466 0 2 378,58, 0,381, -,-, 485456 LINE CR1 1256 chr4 88001316 88001589 CR1-D2 462 - 88001316 88001589 0 2 207,30, 0,243, -,-, 485474 LINE CR1 1256 chr4 88066088 88066805 CR1-C4 463 - 88066088 88066805 0 2 204,510, 0,207, -,-, 485523 LINE CR1 1257 chr4 88080934 88081795 CR1-D2 672 + 88080934 88081795 0 2 593,238, 0,623, +,+, 485535 LINE CR1 1257 chr4 88141555 88142113 CR1-F0 591 + 88141555 88142113 0 3 193,80,163, 0,193,395, +,+,+, 485584 LINE CR1 1257 chr4 88149196 88149456 Char12Mar1_GG 570 - 88149196 88149456 0 2 69,191, 0,69, -,-, 485591 DNA hAT-Charlie 1257 chr4 88171832 88172692 CR1-Y4 442 + 88171832 88172692 0 2 176,600, 0,260, +,+, 485620 LINE CR1 1258 chr4 88274645 88275308 CR1-D 754 - 88274645 88275308 0 2 449,206, 0,457, -,-, 485706 LINE CR1 1258 chr4 88305773 88305854 (ATATGAT)n 520 + 88305773 88305854 0 2 11,9, 0,72, +,+, 485731 Simple_repeat Simple_repeat 1258 chr4 88310439 88310746 GGLTR5A 438 + 88310439 88310746 0 2 151,118, 0,189, +,+, 485738 LTR ERVL 1258 chr4 88314557 88319223 CR1-F2 489 + 88314557 88319223 0 3 208,908,627, 0,2990,4039, +,+,+, 485743 LINE CR1 1258 chr4 88315178 88315816 GGLTR7-int 377 - 88315178 88315816 0 3 116,116,72, 0,116,566, -,-,-, 485744 LTR ERV1 1258 chr4 88332746 88333703 CR1-B2 442 - 88332746 88333703 0 3 634,73,249, 0,635,708, -,-,-, 485752 LINE CR1 1259 chr4 88350773 88352028 CR1-C4 542 + 88350773 88352028 0 2 603,230, 0,1025, +,+, 485772 LINE CR1 1259 chr4 88395758 88396106 GGLTR5A 487 + 88395758 88396106 0 2 121,212, 0,136, +,+, 485807 LTR ERVL 1259 chr4 88437004 88438892 CR1-L3B_Croc 72 + 88437004 88438892 0 2 371,262, 0,1626, +,+, 485837 LINE CR1 1259 chr4 88440723 88440860 (CCT)n 591 + 88440723 88440860 0 2 44,31, 0,106, +,+, 485840 Simple_repeat Simple_repeat 1260 chr4 88582535 88583954 CR1-D2 517 + 88582535 88583954 0 2 1015,404, 0,1015, +,+, 485956 LINE CR1 1261 chr4 88622458 88623800 CR1-L3B_Croc 346 - 88622458 88623800 0 2 254,249, 0,1093, -,-, 485990 LINE CR1 1261 chr4 88655863 88656279 CR1-Y4 541 - 88655863 88656279 0 2 188,228, 0,188, -,-, 486023 LINE CR1 1262 chr4 88773613 88773879 CR1-Y4 576 - 88773613 88773879 0 2 90,171, 0,95, -,-, 486127 LINE CR1 1262 chr4 88839352 88839642 CR1-F2 485 - 88839352 88839642 0 2 245,45, 0,245, -,-, 486189 LINE CR1 1263 chr4 88904783 88907766 CR1-H2 456 + 88904783 88907766 0 2 106,78, 0,2905, +,+, 486240 LINE CR1 1264 chr4 89018729 89018961 CR1-H2 512 - 89018729 89018961 0 2 82,131, 0,101, -,-, 486318 LINE CR1 1264 chr4 89037421 89038922 CR1-F2 489 - 89037421 89038922 0 2 79,231, 0,1270, -,-, 486334 LINE CR1 1264 chr4 89066031 89066465 CR1-C4 680 - 89066031 89066465 0 2 48,120, 0,314, -,-, 486366 LINE CR1 1264 chr4 89085275 89085959 CR1-F2 408 + 89085275 89085959 0 2 78,184, 0,500, +,+, 486399 LINE CR1 1264 chr4 89087904 89088553 CR1-D2 484 + 89087904 89088553 0 2 60,589, 0,60, +,+, 486402 LINE CR1 1264 chr4 89117206 89117592 CR1-F2 421 - 89117206 89117592 0 2 239,147, 0,239, -,-, 486426 LINE CR1 1266 chr4 89287545 89289100 CR1-F2 488 - 89287545 89289100 0 2 69,238, 0,1317, -,-, 486586 LINE CR1 1266 chr4 89293743 89294814 CR1-D2 696 + 89293743 89294814 0 2 71,267, 0,804, +,+, 486593 LINE CR1 1266 chr4 89355324 89355514 CR1-X2 619 + 89355324 89355514 0 2 137,53, 0,137, +,+, 486645 LINE CR1 1267 chr4 89409520 89409781 CR1-X1 571 + 89409520 89409781 0 2 44,213, 0,48, +,+, 486692 LINE CR1 1268 chr4 89609110 89610714 CR1-C4 553 + 89609110 89610714 0 2 98,81, 0,1523, +,+, 486835 LINE CR1 1268 chr4 89635760 89638667 CR1-F2 379 - 89635760 89638667 0 2 287,183, 0,2724, -,-, 486860 LINE CR1 1269 chr4 89695480 89695797 CR1-D2 652 - 89695480 89695797 0 2 87,223, 0,94, -,-, 486901 LINE CR1 1270 chr4 89813684 89814819 CR1-C4 496 - 89813684 89814819 0 2 767,92, 0,1043, -,-, 487021 LINE CR1 1270 chr4 89817615 89817815 CR1-C2 763 - 89817615 89817815 0 2 66,134, 0,66, -,-, 487026 LINE CR1 1270 chr4 89874993 89875832 CR1-Y4 462 + 89874993 89875832 0 2 503,319, 0,520, +,+, 487077 LINE CR1 1271 chr4 90021027 90021351 Char12Mar1_GG 404 + 90021027 90021351 0 2 48,21, 0,303, +,+, 487213 DNA hAT-Charlie 1271 chr4 90024521 90024754 CR1-Y3 716 + 90024521 90024754 0 2 200,33, 0,200, +,+, 487219 LINE CR1 1271 chr4 90030336 90031639 CR1-L3B_Croc 135 + 90030336 90031639 0 2 223,755, 0,548, +,+, 487226 LINE CR1 1272 chr4 90052143 90052476 CR1-D2 597 - 90052143 90052476 0 2 159,174, 0,159, -,-, 487249 LINE CR1 1272 chr4 90054325 90057640 CR1-F2 560 - 90054325 90057640 0 2 255,74, 0,3241, -,-, 487251 LINE CR1 1272 chr4 90082026 90082572 CR1-F2 499 - 90082026 90082572 0 2 135,93, 0,453, -,-, 487274 LINE CR1 1273 chr4 90246235 90246382 CR1-H 488 - 90246235 90246382 0 2 73,64, 0,83, -,-, 487421 LINE CR1 1273 chr4 90249747 90249826 GA-rich 110 + 90249747 90249826 0 2 28,31, 0,48, +,+, 487432 Low_complexity Low_complexity 1273 chr4 90264166 90266927 CR1-X2 340 + 90264166 90266927 0 2 93,89, 0,2672, +,+, 487445 LINE CR1 1273 chr4 90283334 90283749 CR1-F2 120 - 90283334 90283749 0 2 95,194, 0,221, -,-, 487456 LINE CR1 1273 chr4 90308517 90308588 (GGCCG)n 374 + 90308517 90308588 0 2 14,7, 0,64, +,+, 487483 Simple_repeat Simple_repeat 1274 chr4 90322961 90323186 CR1-F2 518 - 90322961 90323186 0 2 146,79, 0,146, -,-, 487493 LINE CR1 1274 chr4 90366277 90367062 CR1-D 312 + 90366277 90367062 0 2 158,185, 0,600, +,+, 487529 LINE CR1 1274 chr4 90377400 90377717 CR1-F2 504 + 90377400 90377717 0 2 129,109, 0,208, +,+, 487541 LINE CR1 1274 chr4 90380854 90381224 CR1-F2 458 + 90380854 90381224 0 2 132,236, 0,134, +,+, 487547 LINE CR1 1274 chr4 90406852 90407799 CR1-L3A_Croc 171 - 90406852 90407799 0 2 454,235, 0,712, -,-, 487572 LINE CR1 1274 chr4 90438226 90438957 CR1-F2 453 + 90438226 90438957 0 2 154,83, 0,648, +,+, 487612 LINE CR1 1275 chr4 90445167 90445912 CR1-F2 503 - 90445167 90445912 0 2 380,286, 0,459, -,-, 487618 LINE CR1 1275 chr4 90453052 90453254 CR1-F2 462 - 90453052 90453254 0 2 96,106, 0,96, -,-, 487629 LINE CR1 1275 chr4 90458608 90458691 (CCGG)n 314 + 90458608 90458691 0 2 10,30, 0,53, +,+, 487634 Simple_repeat Simple_repeat 1275 chr4 90481471 90485878 CR1-B2 561 - 90481471 90485878 0 3 269,891,59, 0,2074,4348, -,-,-, 487657 LINE CR1 1275 chr4 90526891 90527220 CR1-B2 846 + 90526891 90527220 0 2 177,152, 0,177, +,+, 487704 LINE CR1 1276 chr4 90576051 90576611 CR1-Y4 410 - 90576051 90576611 0 2 78,295, 0,265, -,-, 487754 LINE CR1 1276 chr4 90623184 90626519 CR1-F2 415 - 90623184 90626519 0 3 211,112,149, 0,776,3186, -,-,-, 487813 LINE CR1 1276 chr4 90634728 90634788 (TCTT)n 490 + 90634728 90634788 0 2 9,18, 0,42, +,+, 487820 Simple_repeat Simple_repeat 1276 chr4 90649290 90649839 CR1-Y4 487 + 90649290 90649839 0 3 178,114,128, 0,303,421, +,+,+, 487831 LINE CR1 1276 chr4 90666187 90666967 CR1-C2 479 + 90666187 90666967 0 2 18,109, 0,671, +,+, 487856 LINE CR1 1276 chr4 90675121 90675208 (TATAA)n 388 + 90675121 90675208 0 2 9,27, 0,60, +,+, 487867 Simple_repeat Simple_repeat 1276 chr4 90684883 90685399 CR1-F2 365 + 90684883 90685399 0 2 130,151, 0,365, +,+, 487883 LINE CR1 1277 chr4 90713684 90713949 Charlie12_GG 384 - 90713684 90713949 0 2 70,113, 0,152, -,-, 487916 DNA hAT-Charlie 1277 chr4 90780815 90784071 CR1-F2 236 + 90780815 90784071 0 2 150,345, 0,2911, +,+, 488013 LINE CR1 1278 chr4 90842191 90843312 CR1-F2 459 + 90842191 90843312 0 3 76,121,138, 0,76,983, +,+,+, 488079 LINE CR1 1278 chr4 90934607 90937311 CR1-F2 454 + 90934607 90937311 0 2 221,125, 0,2579, +,+, 488168 LINE CR1 1278 chr4 90961964 90962048 (TTCTTT)n 520 + 90961964 90962048 0 2 33,7, 0,77, +,+, 488195 Simple_repeat Simple_repeat 1279 chr4 90996913 90997512 CR1-Y1_Aves 380 - 90996913 90997512 0 2 194,368, 0,231, -,-, 488230 LINE CR1 1280 chr4 91096767 91097487 CR1-F2 410 - 91096767 91097487 0 2 95,170, 0,550, -,-, 488333 LINE CR1 1280 chr4 91100338 91101360 CR1-L3B_Croc 212 - 91100338 91101360 0 2 235,129, 0,893, -,-, 488337 LINE CR1 1280 chr4 91151896 91152225 CR1-Y4 524 - 91151896 91152225 0 2 74,255, 0,74, -,-, 488392 LINE CR1 1280 chr4 91161484 91162754 Char12Mar1_GG 447 - 91161484 91162754 0 2 709,123, 0,1147, -,-, 488400 DNA hAT-Charlie 1280 chr4 91176272 91178256 CR1-F2 389 + 91176272 91178256 0 2 162,312, 0,1672, +,+, 488412 LINE CR1 1280 chr4 91215982 91218527 CR1-H2 394 - 91215982 91218527 0 2 75,93, 0,2452, -,-, 488464 LINE CR1 1280 chr4 91221813 91222131 CR1-B2 542 + 91221813 91222131 0 2 157,57, 0,261, +,+, 488475 LINE CR1 1281 chr4 91226291 91231014 CR1-F2 280 + 91226291 91231014 0 3 124,85,152, 0,3278,4571, +,+,+, 488483 LINE CR1 1281 chr4 91235752 91236168 CR1-Y4 486 - 91235752 91236168 0 3 46,11,166, 0,139,250, -,-,-, 488493 LINE CR1 1281 chr4 91235798 91235989 CR1-Y2 749 - 91235798 91235989 0 2 93,49, 0,142, -,-, 488494 LINE CR1 1281 chr4 91240956 91241283 CR1-F2 426 + 91240956 91241283 0 3 15,92,73, 0,152,254, +,+,+, 488501 LINE CR1 1281 chr4 91243329 91243674 CR1-D2 761 + 91243329 91243674 0 3 41,45,49, 0,145,296, +,+,+, 488504 LINE CR1 1281 chr4 91243510 91243636 CR1-E 724 + 91243510 91243636 0 3 50,38,38, 0,50,88, +,+,+, 488508 LINE CR1 1281 chr4 91243671 91244054 CR1-E 733 + 91243671 91244054 0 10 41,38,38,38,38,35,40,38,38,38, 0,41,79,117,155,193,229,269,307,345, +,+,+,+,+,+,+,+,+,+, 488509 LINE CR1 1281 chr4 91251735 91252016 (ACCCCATAGGG)n 430 + 91251735 91252016 0 2 121,134, 0,147, +,+, 488514 Satellite Satellite 1281 chr4 91252114 91252410 (ACCCCATAGGG)n 390 + 91252114 91252410 0 2 133,133, 0,163, +,+, 488515 Satellite Satellite 1281 chr4 91255624 91255728 CR1-C4 591 + 91255624 91255728 0 2 54,50, 0,54, +,+, 488518 LINE CR1 1281 chr4 91266536 91266941 CR1-F0 458 - 91266536 91266941 0 2 93,86, 0,319, -,-, 488529 LINE CR1 585 chr4_NT_459800v1_random 92 856 CR1-D2 544 + 92 856 0 2 396,233, 0,531, +,+, 488542 LINE CR1 585 chr4_NT_459800v1_random 11982 12729 CR1-Y2_Aves 326 + 11982 12729 0 2 478,246, 0,501, +,+, 488547 LINE CR1 585 chr4_NT_459800v1_random 16534 17307 CR1-Y2_Aves 223 + 16534 17307 0 2 479,250, 0,523, +,+, 488551 LINE CR1 585 chr4_NT_459800v1_random 38276 39145 CR1-Y2_Aves 347 + 38276 39145 0 2 298,570, 0,299, +,+, 488562 LINE CR1 585 chr4_NT_459800v1_random 57146 57470 GGERV10_LTR 669 + 57146 57470 0 2 62,153, 0,171, +,+, 488573 LTR ERVL 585 chr4_NT_459800v1_random 63697 64278 CR1-X2 567 + 63697 64278 0 2 402,179, 0,402, +,+, 488579 LINE CR1 585 chr4_NT_459800v1_random 66790 67471 CR1-Y2_Aves 254 - 66790 67471 0 2 387,294, 0,387, -,-, 488582 LINE CR1 585 chr4_NT_459800v1_random 78998 80084 CR1-Y2_Aves 242 + 78998 80084 0 2 480,562, 0,524, +,+, 488593 LINE CR1 585 chr4_NT_459800v1_random 87926 88561 CR1-X2 528 + 87926 88561 0 2 458,165, 0,470, +,+, 488603 LINE CR1 585 chr4_NT_459800v1_random 91030 92101 CR1-Y2_Aves 276 - 91030 92101 0 2 481,479, 0,592, -,-, 488606 LINE CR1 585 chr4_NT_459800v1_random 101897 102578 CR1-Y2_Aves 237 + 101897 102578 0 2 308,373, 0,308, +,+, 488608 LINE CR1 586 chr4_NT_459800v1_random 138869 139449 CR1-X2 556 + 138869 139449 0 2 401,179, 0,401, +,+, 488637 LINE CR1 586 chr4_NT_459800v1_random 191026 191700 CR1-Y2_Aves 246 - 191026 191700 0 2 387,287, 0,387, -,-, 488668 LINE CR1 586 chr4_NT_459800v1_random 208223 208982 CR1-Y2_Aves 223 + 208223 208982 0 2 350,388, 0,371, +,+, 488678 LINE CR1 586 chr4_NT_459800v1_random 219732 220056 GGERV10_LTR 667 - 219732 220056 0 2 160,62, 0,262, -,-, 488689 LTR ERVL 586 chr4_NT_459800v1_random 227215 228284 CR1-X2 375 + 227215 228284 0 2 890,179, 0,890, +,+, 488693 LINE CR1 586 chr4_NT_459800v1_random 246775 248851 GGERVL-C-int 720 + 246775 248851 0 5 845,784,91,244,51, 0,845,1690,1781,2025, +,+,+,+,+, 488708 LTR ERVL 587 chr4_NT_459800v1_random 271129 272286 CR1-X2 468 - 271129 272286 0 2 186,971, 0,186, -,-, 488720 LINE CR1 587 chr4_NT_459800v1_random 310885 311896 CR1-Y2_Aves 256 + 310885 311896 0 2 492,464, 0,547, +,+, 488742 LINE CR1 587 chr4_NT_459800v1_random 314054 317008 GGERV28_I-int 172 - 314054 317008 0 3 1979,173,504, 0,2006,2450, -,-,-, 488744 LTR ERVK 587 chr4_NT_459800v1_random 351453 352291 CR1-Y2_Aves 293 + 351453 352291 0 3 192,320,242, 0,203,596, +,+,+, 488774 LINE CR1 587 chr4_NT_459800v1_random 362468 363212 CR1-Y2_Aves 244 + 362468 363212 0 2 339,388, 0,356, +,+, 488785 LINE CR1 588 chr4_NT_459800v1_random 405919 406758 CR1-Y2_Aves 271 - 405919 406758 0 3 239,384,190, 0,254,649, -,-,-, 488827 LINE CR1 588 chr4_NT_459800v1_random 416449 417192 CR1-Y2_Aves 245 + 416449 417192 0 2 339,387, 0,356, +,+, 488835 LINE CR1 588 chr4_NT_459800v1_random 419758 420912 CR1-X2 486 - 419758 420912 0 2 183,971, 0,183, -,-, 488840 LINE CR1 588 chr4_NT_459800v1_random 452098 452830 CR1-Y2_Aves 237 + 452098 452830 0 2 323,388, 0,344, +,+, 488867 LINE CR1 588 chr4_NT_459800v1_random 475361 475794 CR1-G 547 - 475361 475794 0 2 220,99, 0,334, -,-, 488886 LINE CR1 585 chr4_NT_459801v1_random 81283 82740 CR1-Y1_Aves 304 + 81283 82740 0 4 152,348,520,77, 0,164,533,1380, +,+,+,+, 488948 LINE CR1 585 chr4_NT_459801v1_random 96657 97232 TguLTR5e 452 + 96657 97232 0 2 94,196, 0,379, +,+, 488956 LTR ERVL 585 chr4_NT_459802v1_random 10874 11045 G-rich 528 + 10874 11045 0 2 101,41, 0,130, +,+, 489050 Low_complexity Low_complexity 585 chr4_NT_459802v1_random 34726 38102 CR1-D 333 + 34726 38102 0 2 261,87, 0,3289, +,+, 489080 LINE CR1 585 chr4_NT_459802v1_random 51774 52347 CR1-Y4 150 - 51774 52347 0 2 174,372, 0,201, -,-, 489096 LINE CR1 585 chr4_NT_459802v1_random 55282 55416 CR1-C3 707 - 55282 55416 0 3 48,43,43, 0,48,91, -,-,-, 489102 LINE CR1 585 chr4_NT_459802v1_random 112651 112758 (CTCCGCC)n 376 + 112651 112758 0 2 11,11, 0,96, +,+, 489171 Simple_repeat Simple_repeat 585 chr4_NT_459802v1_random 114809 115221 (GGATG)n 601 + 114809 115221 0 2 174,177, 0,235, +,+, 489176 Simple_repeat Simple_repeat 585 chr4_NT_459802v1_random 119237 120565 GGERV20_I-int 261 - 119237 120565 0 5 147,89,310,336,215, 0,148,257,693,1113, -,-,-,-,-, 489182 LTR ERVL 585 chr4_NT_459803v1_random 21481 22711 CR1-F 392 + 21481 22711 0 2 232,499, 0,731, +,+, 489235 LINE CR1 585 chr4_NT_459803v1_random 35647 37281 CR1-C4 555 + 35647 37281 0 2 1531,48, 0,1586, +,+, 489242 LINE CR1 585 chr4_NT_459804v1_random 26871 27252 GGLTR4A 636 - 26871 27252 0 2 118,243, 0,138, -,-, 489271 LTR ERVL 585 chr4_NT_459804v1_random 31908 32216 GGLTR3B2 619 + 31908 32216 0 2 246,46, 0,262, +,+, 489276 LTR ERVL 585 chr4_NT_459805v1_random 15328 17119 CR1-C4 646 - 15328 17119 0 2 144,484, 0,1307, -,-, 489297 LINE CR1 585 chr4_NT_459805v1_random 15464 16634 ENS1-int 964 + 15464 16634 0 2 257,913, 0,257, +,+, 489298 LTR ERVL 585 chr4_NT_459806v1_random 10559 10973 GGLTR3F2 753 + 10559 10973 0 2 233,124, 0,290, +,+, 489322 LTR ERVL 585 chr4_NT_459806v1_random 18679 28964 ENS1-int 966 - 18679 28964 0 6 913,2828,913,2829,911,1888, 0,913,3741,4654,7483,8397, -,-,-,-,-,-, 489329 LTR ERVL 585 chr4_NT_459807v1_random 2282 2937 (TCC)n 591 + 2282 2937 0 2 580,57, 0,598, +,+, 489337 Simple_repeat Simple_repeat 585 chr4_NT_459807v1_random 25830 26854 CR1-C 545 - 25830 26854 0 2 588,436, 0,588, -,-, 489402 LINE CR1 585 chr4_NT_459809v1_random 18794 20519 CR1-G 509 - 18794 20519 0 3 394,159,599, 0,711,1126, -,-,-, 489431 LINE CR1 585 chr4_NT_459810v1_random 1430 1535 CR1-C3 729 + 1430 1535 0 2 61,44, 0,61, +,+, 489438 LINE CR1 585 chr4_NT_459810v1_random 4313 5117 CR1-C4 219 - 4313 5117 0 2 216,243, 0,561, -,-, 489441 LINE CR1 585 chr4_NT_459810v1_random 8369 8474 CR1-C3 729 + 8369 8474 0 2 61,44, 0,61, +,+, 489446 LINE CR1 585 chr4_NT_459810v1_random 11252 12056 CR1-C4 219 - 11252 12056 0 2 216,243, 0,561, -,-, 489449 LINE CR1 585 chr4_NT_459810v1_random 13668 13841 GGLTR4B 739 + 13668 13841 0 2 69,83, 0,90, +,+, 489452 LTR ERVL 585 chr4_NT_459810v1_random 15308 15413 CR1-C3 729 + 15308 15413 0 2 61,44, 0,61, +,+, 489454 LINE CR1 585 chr4_NT_459810v1_random 18191 18995 CR1-C4 219 - 18191 18995 0 2 216,243, 0,561, -,-, 489457 LINE CR1 585 chr4_NT_459810v1_random 20611 20784 GGLTR4B 739 + 20611 20784 0 2 69,83, 0,90, +,+, 489460 LTR ERVL 585 chr4_NT_459810v1_random 22250 22355 CR1-C3 729 + 22250 22355 0 2 61,44, 0,61, +,+, 489462 LINE CR1 585 chr4_NT_459812v1_random 11987 12368 GGERV22_LTR 637 - 11987 12368 0 2 229,152, 0,229, -,-, 489476 LTR ERVL 585 chr4_NT_459817v1_random 4580 4733 CR1-C3 485 - 4580 4733 0 2 74,79, 0,74, -,-, 489538 LINE CR1 585 chr4_NT_459817v1_random 6180 6353 GGLTR4B 739 - 6180 6353 0 2 83,69, 0,104, -,-, 489540 LTR ERVL 585 chr4_NT_459817v1_random 7966 8769 CR1-C4 217 + 7966 8769 0 2 241,216, 0,587, +,+, 489542 LINE CR1 585 chr4_NT_459817v1_random 11548 11673 CR1-C3 692 - 11548 11673 0 2 45,80, 0,45, -,-, 489544 LINE CR1 585 chr4_NT_459817v1_random 14905 15671 CR1-C4 161 + 14905 15671 0 2 252,216, 0,550, +,+, 489548 LINE CR1 585 chr4_NT_459817v1_random 18347 18497 CR1-C3 487 - 18347 18497 0 2 72,78, 0,72, -,-, 489550 LINE CR1 585 chr4_NT_459817v1_random 19833 19987 GGLTR4A 507 - 19833 19987 0 2 70,62, 0,92, -,-, 489552 LTR ERVL 585 chr4_NT_459823v1_random 9213 9801 CR1-D2 443 - 9213 9801 0 2 293,294, 0,294, -,-, 489639 LINE CR1 585 chr4_NT_459829v1_random 2340 3008 CR1-Y2_Aves 228 + 2340 3008 0 2 296,372, 0,296, +,+, 489707 LINE CR1 585 chr4_NT_459839v1_random 1699 2421 CR1-F2 596 + 1699 2421 0 2 434,188, 0,534, +,+, 489831 LINE CR1 585 chr4_NT_459845v1_random 6541 6906 CR1-Y4 472 - 6541 6906 0 2 220,145, 0,220, -,-, 489884 LINE CR1 585 chr4_NT_459847v1_random 382 1362 CR1-C 711 + 382 1362 0 2 425,555, 0,425, +,+, 489901 LINE CR1 585 chr4_NT_459847v1_random 5418 5831 CR1-C 590 + 5418 5831 0 2 291,79, 0,334, +,+, 489912 LINE CR1 585 chr4_NT_459847v1_random 9127 9693 GA-rich 360 + 9127 9693 0 2 369,178, 0,388, +,+, 489919 Low_complexity Low_complexity 585 chr4_NT_459847v1_random 11244 12200 CR1-C 633 + 11244 12200 0 2 377,579, 0,377, +,+, 489923 LINE CR1 585 chr4_NT_459847v1_random 13065 13400 CR1-C 635 + 13065 13400 0 2 289,46, 0,289, +,+, 489928 LINE CR1 585 chr4_NT_459847v1_random 14145 14926 CR1-C 742 + 14145 14926 0 2 428,353, 0,428, +,+, 489931 LINE CR1 585 chr4_NT_459849v1_random 1692 1795 (TTGT)n 340 + 1692 1795 0 2 27,59, 0,44, +,+, 489937 Simple_repeat Simple_repeat 585 chr4_NT_459854v1_random 12225 14364 CR1-Y4 492 - 12225 14364 0 2 236,563, 0,1576, -,-, 489997 LINE CR1 585 chr4_NT_459861v1_random 666 1626 CR1-C 685 + 666 1626 0 2 413,547, 0,413, +,+, 490035 LINE CR1 585 chr4_NT_459861v1_random 2363 3330 CR1-C 690 + 2363 3330 0 2 420,547, 0,420, +,+, 490039 LINE CR1 585 chr4_NT_459861v1_random 3714 3865 GA-rich 437 + 3714 3865 0 2 32,74, 0,77, +,+, 490041 Low_complexity Low_complexity 585 chr4_NT_459861v1_random 3951 4013 (GAG)n 907 + 3951 4013 0 2 26,23, 0,39, +,+, 490043 Simple_repeat Simple_repeat 585 chr4_NT_459861v1_random 4013 4985 CR1-C 712 + 4013 4985 0 2 424,548, 0,424, +,+, 490044 LINE CR1 585 chr4_NT_459861v1_random 5708 6679 CR1-C 681 + 5708 6679 0 2 415,556, 0,415, +,+, 490046 LINE CR1 585 chr4_NT_459861v1_random 7411 8380 CR1-C 707 + 7411 8380 0 2 427,542, 0,427, +,+, 490049 LINE CR1 585 chr4_NT_459861v1_random 8482 9092 GA-rich 358 + 8482 9092 0 2 418,174, 0,436, +,+, 490050 Low_complexity Low_complexity 585 chr4_NT_459861v1_random 9048 10051 CR1-C 628 + 9048 10051 0 2 459,544, 0,459, +,+, 490051 LINE CR1 585 chr4_NT_459861v1_random 10787 11158 CR1-C 675 + 10787 11158 0 2 193,107, 0,264, +,+, 490055 LINE CR1 585 chr4_NT_459865v1_random 12535 13236 GGLTR12C 706 - 12535 13236 0 2 56,302, 0,399, -,-, 490092 LTR ERVL 585 chr4_NT_459866v1_random 5303 6171 GGLTR5A 479 + 5303 6171 0 2 76,79, 0,789, +,+, 490095 LTR ERVL 585 chr4_NT_459873v1_random 4917 6320 CR1-H2 909 + 4917 6320 0 2 39,689, 0,714, +,+, 490142 LINE CR1 585 chr4_NT_459879v1_random 1919 3020 Char12Mar1_GG 489 - 1919 3020 0 2 415,686, 0,415, -,-, 490172 DNA hAT-Charlie 585 chr4_NT_459897v1_random 3795 4422 GGERVL-C-int 503 + 3795 4422 0 2 113,514, 0,113, +,+, 490282 LTR ERVL 585 chr4_NT_459897v1_random 10395 10802 CR1-Y1_Aves 432 + 10395 10802 0 2 193,214, 0,193, +,+, 490286 LINE CR1 585 chr4_NT_459906v1_random 449 1500 CR1-C4 573 + 449 1500 0 2 83,218, 0,833, +,+, 490349 LINE CR1 585 chr4_NT_459909v1_random 1941 8416 GGXHOI 542 + 1941 8416 0 8 797,248,818,193,884,375,194,503, 0,1120,1819,3035,3550,4757,5455,5972, +,+,+,+,+,+,+,+, 490375 Satellite W-chromosome 585 chr4_NT_459913v1_random 2822 4270 CR1-D2 476 + 2822 4270 0 2 678,683, 0,765, +,+, 490394 LINE CR1 585 chr4_NT_459914v1_random 985 1517 CR1-F2 438 - 985 1517 0 2 351,180, 0,352, -,-, 490401 LINE CR1 585 chr4_NT_459919v1_random 9222 10129 CR1-C3 712 - 9222 10129 0 2 494,405, 0,502, -,-, 490424 LINE CR1 585 chr4_NT_459924v1_random 5624 5712 (TAA)n 470 + 5624 5712 0 2 11,40, 0,48, +,+, 490447 Simple_repeat Simple_repeat 585 chr4_NT_459932v1_random 7999 8357 GGLTR5A 503 + 7999 8357 0 2 168,190, 0,168, +,+, 490484 LTR ERVL 585 chr4_NT_459949v1_random 6343 6930 Char12Mar1_GG 482 - 6343 6930 0 2 448,83, 0,504, -,-, 490579 DNA hAT-Charlie 585 chr4_NT_459953v1_random 7752 8033 GGERV10_LTR 419 + 7752 8033 0 2 43,155, 0,126, +,+, 490604 LTR ERVL 585 chr4_NT_459955v1_random 3110 3694 CR1-F2 588 - 3110 3694 0 2 117,467, 0,117, -,-, 490617 LINE CR1 585 chr4_NT_459955v1_random 4711 5170 ENS1-LTR 242 - 4711 5170 0 2 204,185, 0,274, -,-, 490618 LTR ERVL 585 chr4_NT_459961v1_random 6198 6974 CR1-C4 392 - 6198 6974 0 2 429,265, 0,511, -,-, 490654 LINE CR1 585 chr4_NT_459964v1_random 7921 7966 (TATGTT)n 498 + 7921 7966 0 2 12,11, 0,34, +,+, 490675 Simple_repeat Simple_repeat 585 chr4_NT_459970v1_random 1746 2753 Mariner1_GG 422 + 1746 2753 0 2 826,151, 0,856, +,+, 490707 DNA TcMar-Mariner 585 chr4_NT_459976v1_random 5990 6340 CR1-F2 535 + 5990 6340 0 2 95,192, 0,158, +,+, 490735 LINE CR1 585 chr4_NT_459984v1_random 7993 8077 (T)n 1000 + 7993 8077 0 2 25,18, 0,66, +,+, 490777 Simple_repeat Simple_repeat 585 chr4_NT_459986v1_random 5902 6206 GGLTR5B 698 - 5902 6206 0 2 52,252, 0,52, -,-, 490784 LTR ERVL 585 chr4_NT_459994v1_random 4294 5347 CR1-D2 684 + 4294 5347 0 2 117,536, 0,517, +,+, 490824 LINE CR1 585 chr4_NT_460022v1_random 4126 5394 CR1-Y2_Aves 355 - 4126 5394 0 2 505,100, 0,1168, -,-, 490956 LINE CR1 585 chr4_NT_460022v1_random 5569 6880 CR1-D 678 - 5569 6880 0 2 1166,145, 0,1166, -,-, 490958 LINE CR1 585 chr4_NT_460026v1_random 4513 5086 CR1-X2 602 + 4513 5086 0 2 144,84, 0,489, +,+, 490973 LINE CR1 585 chr4_NT_460031v1_random 1054 2592 CR1-C3 716 - 1054 2592 0 4 600,126,153,279, 0,600,726,1259, -,-,-,-, 490996 LINE CR1 585 chr4_NT_460032v1_random 4285 4436 (CTCCA)n 172 + 4285 4436 0 2 19,103, 0,48, +,+, 491014 Simple_repeat Simple_repeat 585 chr4_NT_460053v1_random 5146 5196 (TTTTAT)n 722 + 5146 5196 0 2 9,12, 0,38, +,+, 491119 Simple_repeat Simple_repeat 585 chr4_NT_460054v1_random 6186 7288 CR1-F2 621 + 6186 7288 0 2 204,98, 0,1004, +,+, 491124 LINE CR1 585 chr4_NT_460073v1_random 4579 5048 X2_LINE 288 + 4579 5048 0 2 239,186, 0,283, +,+, 491201 LINE CR1 585 chr4_NT_460094v1_random 2024 2094 A-rich 240 + 2024 2094 0 2 12,40, 0,30, +,+, 491295 Low_complexity Low_complexity 585 chr4_NT_460107v1_random 1328 1849 CR1-Y2_Aves 174 + 1328 1849 0 2 215,203, 0,318, +,+, 491337 LINE CR1 585 chr4_NT_460118v1_random 2390 2688 CR1-D2 628 + 2390 2688 0 2 75,198, 0,100, +,+, 491374 LINE CR1 585 chr4_NT_460122v1_random 1984 2357 Char12Mar1_GG 505 - 1984 2357 0 2 224,149, 0,224, -,-, 491391 DNA hAT-Charlie 585 chr4_NT_460141v1_random 2802 3429 CR1-L3A_Croc 191 - 2802 3429 0 2 172,360, 0,267, -,-, 491451 LINE CR1 585 chr4_NT_460163v1_random 3061 5051 Charlie12_GG 427 - 3061 5051 0 3 1245,539,58, 0,1272,1932, -,-,-, 491511 DNA hAT-Charlie 585 chr4_NT_460244v1_random 3189 3628 RSV-int 353 - 3189 3628 0 2 104,156, 0,283, -,-, 491721 LTR ERVK 585 chr4_NT_460282v1_random 1729 2425 GGLTR5B 380 + 1729 2425 0 2 221,279, 0,417, +,+, 491815 LTR ERVL 585 chr4_NT_460303v1_random 1769 2009 CR1-Y3 664 + 1769 2009 0 2 201,39, 0,201, +,+, 491860 LINE CR1 585 chr4_NT_460383v1_random 741 1501 (CCCTAA)n 635 + 741 1501 0 2 508,235, 0,525, +,+, 492005 Simple_repeat Simple_repeat 585 chr5 13346 13436 CR1-C4 660 - 13346 13436 0 2 47,43, 0,47, -,-, 492058 LINE CR1 585 chr5 34049 34469 CR1-B2 441 - 34049 34469 0 2 11,238, 0,182, -,-, 492075 LINE CR1 585 chr5 73890 74917 CR1-Y2 269 - 73890 74917 0 2 148,775, 0,252, -,-, 492107 LINE CR1 586 chr5 131758 132098 CR1-C4 506 - 131758 132098 0 2 142,198, 0,142, -,-, 492156 LINE CR1 586 chr5 149367 153464 CR1-C 518 - 149367 153464 0 2 222,119, 0,3978, -,-, 492164 LINE CR1 586 chr5 182224 182318 CR1-B2 626 + 182224 182318 0 2 51,43, 0,51, +,+, 492173 LINE CR1 586 chr5 185876 186257 CR1-B2 453 + 185876 186257 0 2 207,96, 0,285, +,+, 492180 LINE CR1 586 chr5 186253 186343 CR1-C4 681 + 186253 186343 0 2 47,43, 0,47, +,+, 492182 LINE CR1 586 chr5 230816 231438 CR1-F2 624 + 230816 231438 0 2 247,371, 0,251, +,+, 492204 LINE CR1 586 chr5 249740 250540 (CATTC)n 617 + 249740 250540 0 4 191,195,47,177, 0,191,561,623, +,+,+,+, 492217 Satellite Satellite 587 chr5 311922 312628 (CATGC)n 409 + 311922 312628 0 3 178,205,323, 0,178,383, +,+,+, 492255 Simple_repeat Simple_repeat 587 chr5 385196 385279 G-rich 609 + 385196 385279 0 2 29,40, 0,43, +,+, 492300 Low_complexity Low_complexity 588 chr5 430704 432496 CR1-F2 408 + 430704 432496 0 2 1617,175, 0,1617, +,+, 492324 LINE CR1 588 chr5 460688 460898 CR1-C3 672 + 460688 460898 0 2 165,45, 0,165, +,+, 492336 LINE CR1 588 chr5 480690 480787 CR1-C4 823 - 480690 480787 0 2 54,43, 0,54, -,-, 492343 LINE CR1 588 chr5 480825 483474 CR1-C4 650 - 480825 483474 0 3 47,72,716, 0,1861,1933, -,-,-, 492346 LINE CR1 588 chr5 501194 501263 (AGCGGC)n 372 + 501194 501263 0 2 14,17, 0,52, +,+, 492352 Simple_repeat Simple_repeat 589 chr5 559159 559885 CR1-C3 565 + 559159 559885 0 2 93,390, 0,336, +,+, 492380 LINE CR1 589 chr5 563641 564821 CR1-Y4 344 + 563641 564821 0 2 856,321, 0,859, +,+, 492383 LINE CR1 590 chr5 702506 703294 CR1-Y2_Aves 276 + 702506 703294 0 2 567,78, 0,710, +,+, 492453 LINE CR1 590 chr5 749638 750281 CR1-F2 134 - 749638 750281 0 2 281,90, 0,553, -,-, 492468 LINE CR1 590 chr5 751433 751809 CR1-Y1_Aves 444 + 751433 751809 0 2 309,66, 0,310, +,+, 492470 LINE CR1 591 chr5 835853 836051 CR1-F2 502 + 835853 836051 0 2 94,103, 0,95, +,+, 492519 LINE CR1 591 chr5 906867 907208 CR1-D2 570 - 906867 907208 0 2 58,279, 0,62, -,-, 492557 LINE CR1 592 chr5 920189 920664 GGLTR5B 712 + 920189 920664 0 2 215,49, 0,426, +,+, 492563 LTR ERVL 592 chr5 946471 947065 GGLTR8B 285 + 946471 947065 0 2 302,292, 0,302, +,+, 492577 LTR ERVL 592 chr5 992571 993874 CR1-F 847 - 992571 993874 0 2 775,520, 0,783, -,-, 492606 LINE CR1 593 chr5 1106118 1108878 CR1-F2 437 - 1106118 1108878 0 2 31,243, 0,2517, -,-, 492684 LINE CR1 594 chr5 1207723 1208955 CR1-F 627 + 1207723 1208955 0 2 117,1115, 0,117, +,+, 492769 LINE CR1 595 chr5 1367303 1367615 CR1-C4 539 - 1367303 1367615 0 2 75,231, 0,81, -,-, 492885 LINE CR1 595 chr5 1379309 1379666 CR1-X1 575 - 1379309 1379666 0 2 149,208, 0,149, -,-, 492893 LINE CR1 596 chr5 1448007 1448170 CR1-F0 563 - 1448007 1448170 0 2 74,80, 0,83, -,-, 492920 LINE CR1 596 chr5 1530907 1532307 CR1-C2 322 + 1530907 1532307 0 2 92,216, 0,1184, +,+, 492950 LINE CR1 597 chr5 1587780 1588441 CR1-X 280 + 1587780 1588441 0 2 205,359, 0,302, +,+, 492991 LINE CR1 598 chr5 1776674 1777276 CR1-C4 601 + 1776674 1777276 0 2 423,179, 0,423, +,+, 493061 LINE CR1 74 chr5 1833152 1835348 CR1-H 846 - 1833152 1835348 0 2 2157,39, 0,2157, -,-, 493081 LINE CR1 599 chr5 1843117 1843413 CR1-D2 661 - 1843117 1843413 0 2 239,57, 0,239, -,-, 493088 LINE CR1 599 chr5 1928909 1929004 (TCCTC)n 650 + 1928909 1929004 0 2 16,11, 0,84, +,+, 493139 Simple_repeat Simple_repeat 600 chr5 1976278 1976532 CR1-F2 709 - 1976278 1976532 0 2 121,133, 0,121, -,-, 493164 LINE CR1 601 chr5 2119151 2119767 CR1-C2 726 + 2119151 2119767 0 3 223,129,264, 0,223,352, +,+,+, 493258 LINE CR1 602 chr5 2270866 2272195 CR1-E 712 + 2270866 2272195 0 2 126,1202, 0,127, +,+, 493332 LINE CR1 602 chr5 2274208 2275382 CR1-Y1_Aves 371 - 2274208 2275382 0 2 723,89, 0,1085, -,-, 493335 LINE CR1 603 chr5 2369780 2370971 CR1-C4 501 - 2369780 2370971 0 3 489,471,188, 0,531,1003, -,-,-, 493396 LINE CR1 603 chr5 2389847 2390368 GGLTR5A 491 - 2389847 2390368 0 2 79,426, 0,95, -,-, 493405 LTR ERVL 604 chr5 2501350 2502635 GGERVL18-int 577 - 2501350 2502635 0 3 330,483,465, 0,332,820, -,-,-, 493476 LTR ERVL 604 chr5 2526687 2530166 GGLTR10C2 903 + 2526687 2530166 0 3 364,2751,364, 0,364,3115, +,+,+, 493488 LTR ERVK 604 chr5 2539125 2540989 CR1-C4 541 + 2539125 2540989 0 3 341,539,450, 0,871,1414, +,+,+, 493492 LINE CR1 604 chr5 2541052 2544480 CR1-H 766 - 2541052 2544480 0 3 419,917,201, 0,519,3227, -,-,-, 493494 LINE CR1 604 chr5 2565813 2566806 CR1-C4 558 + 2565813 2566806 0 2 539,450, 0,543, +,+, 493511 LINE CR1 604 chr5 2566869 2568305 CR1-H 783 - 2566869 2568305 0 2 419,917, 0,519, -,-, 493512 LINE CR1 604 chr5 2577127 2579434 CR1-G 829 + 2577127 2579434 0 2 356,1951, 0,356, +,+, 493517 LINE CR1 605 chr5 2633086 2635796 GGERVL18-int 730 - 2633086 2635796 0 3 345,319,2046, 0,345,664, -,-,-, 493546 LTR ERVL 605 chr5 2642775 2643306 CR1-X2 410 - 2642775 2643306 0 2 93,398, 0,133, -,-, 493551 LINE CR1 605 chr5 2662174 2663512 CR1-C2 801 - 2662174 2663512 0 2 721,349, 0,989, -,-, 493567 LINE CR1 605 chr5 2665171 2665811 MER130 202 + 2665171 2665811 0 2 60,551, 0,89, +,+, 493570 DNA DNA 605 chr5 2672068 2676122 GGLTR3F1 840 + 2672068 2676122 0 2 493,3559, 0,495, +,+, 493577 LTR ERVL 605 chr5 2676104 2678863 GGERVL18-int 597 + 2676104 2678863 0 5 172,82,1208,253,342, 0,366,453,2160,2417, +,+,+,+,+, 493578 LTR ERVL 605 chr5 2684153 2684942 ENS1B-LTR 422 + 2684153 2684942 0 2 315,394, 0,395, +,+, 493586 LTR ERVL 605 chr5 2716318 2716533 CR1-F2 462 - 2716318 2716533 0 2 167,48, 0,167, -,-, 493601 LINE CR1 75 chr5 2751926 2756468 GGERVL18-int 667 - 2751926 2756468 0 3 247,1487,2804, 0,251,1738, -,-,-, 493613 LTR ERVL 606 chr5 2762972 2763536 GGLTR3A 913 - 2762972 2763536 0 2 37,527, 0,37, -,-, 493619 LTR ERVL 606 chr5 2831578 2834940 GGLTR10D 940 + 2831578 2834940 0 3 347,2668,347, 0,347,3015, +,+,+, 493666 LTR ERVK 607 chr5 2909055 2910601 GGLTR3D 664 + 2909055 2910601 0 3 1175,170,200, 0,1175,1346, +,+,+, 493708 LTR ERVL 607 chr5 2951045 2952152 CR1-C3 694 + 2951045 2952152 0 2 541,566, 0,541, +,+, 493737 LINE CR1 607 chr5 2986582 2989275 CR1-G 827 - 2986582 2989275 0 2 1971,231, 0,2462, -,-, 493754 LINE CR1 608 chr5 3022852 3024590 GGERVL18-int 475 + 3022852 3024590 0 2 948,787, 0,951, +,+, 493774 LTR ERVL 608 chr5 3062547 3064079 GGLTR7-int 754 + 3062547 3064079 0 5 62,278,77,54,1061, 0,62,340,417,471, +,+,+,+,+, 493793 LTR ERV1 608 chr5 3066005 3067040 GGERV28_I-int 707 + 3066005 3067040 0 2 415,620, 0,415, +,+, 493794 LTR ERVK 608 chr5 3067048 3073036 GGLTR7A 793 + 3067048 3073036 0 2 5389,599, 0,5389, +,+, 493795 LTR ERV1 608 chr5 3082014 3084525 CR1-C4 625 + 3082014 3084525 0 2 804,323, 0,2188, +,+, 493800 LINE CR1 608 chr5 3082819 3083685 GGLTR12C 602 - 3082819 3083685 0 2 209,636, 0,230, -,-, 493801 LTR ERVL 608 chr5 3087333 3088084 GGLTR12C 465 - 3087333 3088084 0 2 248,101, 0,650, -,-, 493806 LTR ERVL 608 chr5 3119703 3123078 GGLTR10D 955 + 3119703 3123078 0 3 346,2683,346, 0,346,3029, +,+,+, 493831 LTR ERVK 608 chr5 3130491 3135499 GGERV10_LTR 740 - 3130491 3135499 0 3 159,83,4669, 0,256,339, -,-,-, 493837 LTR ERVL 608 chr5 3135499 3136459 GGERVK10-int 658 - 3135499 3136459 0 2 371,589, 0,371, -,-, 493838 LTR ERVK 608 chr5 3142732 3143844 GGLTR1 963 - 3142732 3143844 0 2 871,241, 0,871, -,-, 493845 LTR ERVK 609 chr5 3158470 3164344 GGERVL18-int 710 - 3158470 3164344 0 4 333,532,4646,278, 0,333,880,5596, -,-,-,-, 493854 LTR ERVL 609 chr5 3164562 3165593 GGERV10_LTR 685 + 3164562 3165593 0 3 84,160,688, 0,181,343, +,+,+, 493855 LTR ERVL 609 chr5 3166120 3169480 GGERV28_I-int 637 + 3166120 3169480 0 3 335,1702,1323, 0,335,2037, +,+,+, 493857 LTR ERVK 609 chr5 3169865 3173346 GGLTR10C1 915 + 3169865 3173346 0 3 364,2753,364, 0,364,3117, +,+,+, 493858 LTR ERVK 609 chr5 3173687 3176183 GGERV28_I-int 715 + 3173687 3176183 0 3 72,292,474, 0,1730,2022, +,+,+, 493860 LTR ERVK 609 chr5 3174127 3174974 GGLTR7-int 779 + 3174127 3174974 0 3 217,280,350, 0,217,497, +,+,+, 493861 LTR ERV1 609 chr5 3225734 3226064 CR1-D2 772 - 3225734 3226064 0 2 118,208, 0,122, -,-, 493898 LINE CR1 609 chr5 3264628 3265044 CR1-D2 681 - 3264628 3265044 0 2 108,308, 0,108, -,-, 493927 LINE CR1 610 chr5 3340012 3342414 GGERVL-A-int 662 - 3340012 3342414 0 4 531,311,196,1063, 0,565,1143,1339, -,-,-,-, 493971 LTR ERVL 611 chr5 3449470 3450669 CR1-F2 538 + 3449470 3450669 0 2 170,1028, 0,171, +,+, 494041 LINE CR1 611 chr5 3474342 3481276 GGERVL18-int 602 + 3474342 3481276 0 6 80,1972,850,386,668,344, 0,463,4309,5532,5918,6590, +,+,+,+,+,+, 494057 LTR ERVL 611 chr5 3504238 3510266 GGERV10_LTR 670 - 3504238 3510266 0 5 138,84,5368,159,83, 0,237,321,5690,5945, -,-,-,-,-, 494073 LTR ERVL 611 chr5 3510994 3511100 (T)n 892 + 3510994 3511100 0 2 30,20, 0,86, +,+, 494075 Simple_repeat Simple_repeat 612 chr5 3543248 3544644 CR1-C 851 + 3543248 3544644 0 2 1310,86, 0,1310, +,+, 494097 LINE CR1 612 chr5 3545858 3546871 CR1-C4 624 + 3545858 3546871 0 2 573,440, 0,573, +,+, 494099 LINE CR1 612 chr5 3581237 3582367 CR1-X2 397 - 3581237 3582367 0 2 928,202, 0,928, -,-, 494115 LINE CR1 612 chr5 3589079 3590742 CR1-D2 548 - 3589079 3590742 0 2 508,572, 0,1091, -,-, 494123 LINE CR1 613 chr5 3687430 3693248 CR1-F2 729 - 3687430 3693248 0 3 606,268,460, 0,4209,5358, -,-,-, 494177 LINE CR1 613 chr5 3715374 3715526 (T)n 604 + 3715374 3715526 0 2 29,69, 0,83, +,+, 494202 Simple_repeat Simple_repeat 614 chr5 3845329 3846459 CR1-C4 475 - 3845329 3846459 0 3 450,369,305, 0,450,825, -,-,-, 494266 LINE CR1 614 chr5 3870839 3871268 TguLTR5e 243 + 3870839 3871268 0 2 295,119, 0,310, +,+, 494278 LTR ERVL 614 chr5 3884826 3886310 CR1-X1 460 - 3884826 3886310 0 2 861,97, 0,1387, -,-, 494287 LINE CR1 76 chr5 3926764 3934348 GGERVL-A-int 643 - 3926764 3934348 0 4 125,488,986,974, 0,464,959,6610, -,-,-,-, 494323 LTR ERVL 76 chr5 3928716 3933374 ENS1-LTR 979 + 3928716 3933374 0 3 913,2830,913, 0,915,3745, +,+,+, 494324 LTR ERVL 615 chr5 3937077 3938381 GGERVL-A-int 621 + 3937077 3938381 0 2 525,778, 0,526, +,+, 494327 LTR ERVL 615 chr5 3938381 3940433 GGERVL-C-int 645 + 3938381 3940433 0 2 1537,515, 0,1537, +,+, 494328 LTR ERVL 615 chr5 3943304 3944384 CR1-C 809 - 3943304 3944384 0 2 409,669, 0,411, -,-, 494330 LINE CR1 615 chr5 4028006 4028134 (A)n 800 + 4028006 4028134 0 2 33,33, 0,95, +,+, 494375 Simple_repeat Simple_repeat 615 chr5 4050729 4053481 CR1-F2 561 - 4050729 4053481 0 2 185,505, 0,2247, -,-, 494391 LINE CR1 616 chr5 4077464 4078035 CR1-Y2_Aves 286 + 4077464 4078035 0 2 260,311, 0,260, +,+, 494410 LINE CR1 616 chr5 4135602 4140708 GGERV10_LTR 613 + 4135602 4140708 0 4 154,1783,3117,45, 0,155,1944,5061, +,+,+,+, 494447 LTR ERVL 617 chr5 4196821 4197067 Char12Mar1_GG 687 - 4196821 4197067 0 2 109,137, 0,109, -,-, 494481 DNA hAT-Charlie 617 chr5 4217845 4218523 CR1-F2 654 - 4217845 4218523 0 3 90,306,175, 0,197,503, -,-,-, 494503 LINE CR1 617 chr5 4232781 4234140 CR1-C4 545 + 4232781 4234140 0 2 43,1316, 0,43, +,+, 494516 LINE CR1 617 chr5 4277670 4279031 CR1-C3 629 - 4277670 4279031 0 2 636,725, 0,636, -,-, 494548 LINE CR1 618 chr5 4350961 4351761 CR1-C4 565 - 4350961 4351761 0 2 269,531, 0,269, -,-, 494596 LINE CR1 618 chr5 4353646 4353709 CR1-F2 851 . 4353646 4353709 0 2 34,29, 0,34, -,+, 494599 LINE CR1 618 chr5 4361479 4362137 Char12Mar1_GG 645 - 4361479 4362137 0 2 138,415, 0,243, -,-, 494604 DNA hAT-Charlie 618 chr5 4382291 4382324 (TTTGT)n 596 + 4382291 4382324 0 2 6,8, 0,25, +,+, 494617 Simple_repeat Simple_repeat 619 chr5 4547255 4548885 CR1-F2 544 - 4547255 4548885 0 2 87,656, 0,974, -,-, 494707 LINE CR1 619 chr5 4578814 4578928 A-rich 509 + 4578814 4578928 0 2 52,35, 0,79, +,+, 494720 Low_complexity Low_complexity 620 chr5 4695552 4698934 GGLTR10B 940 + 4695552 4698934 0 3 381,2614,382, 0,383,3000, +,+,+, 494780 LTR ERVK 621 chr5 4790602 4791077 TguLTR5e 312 - 4790602 4791077 0 2 162,282, 0,193, -,-, 494834 LTR ERVL 622 chr5 4851081 4851646 CR1-X1 547 + 4851081 4851646 0 2 497,68, 0,497, +,+, 494864 LINE CR1 622 chr5 4873380 4873944 GGERVL18-int 487 - 4873380 4873944 0 2 340,222, 0,342, -,-, 494881 LTR ERVL 622 chr5 4912842 4913034 CR1-F2 464 + 4912842 4913034 0 2 116,76, 0,116, +,+, 494905 LINE CR1 622 chr5 4934791 4934983 CR1-F2 464 + 4934791 4934983 0 2 116,76, 0,116, +,+, 494911 LINE CR1 623 chr5 4993033 4993909 CR1-G 828 + 4993033 4993909 0 2 408,467, 0,409, +,+, 494945 LINE CR1 623 chr5 5024813 5025421 CR1-Y4 241 - 5024813 5025421 0 3 152,158,149, 0,264,459, -,-,-, 494963 LINE CR1 624 chr5 5215414 5215563 (GCGGA)n 238 + 5215414 5215563 0 2 56,18, 0,131, +,+, 495050 Simple_repeat Simple_repeat 624 chr5 5222381 5222483 (TCT)n 316 + 5222381 5222483 0 2 53,13, 0,89, +,+, 495067 Simple_repeat Simple_repeat 625 chr5 5284090 5284385 CR1-L3B_Croc 232 + 5284090 5284385 0 2 185,96, 0,199, +,+, 495098 LINE CR1 626 chr5 5377114 5378705 CR1-C3 601 + 5377114 5378705 0 2 1131,130, 0,1461, +,+, 495139 LINE CR1 626 chr5 5428010 5429637 GGERVL-C-int 681 - 5428010 5429637 0 2 230,1397, 0,230, -,-, 495161 LTR ERVL 627 chr5 5601131 5601474 Char12Mar1_GG 729 - 5601131 5601474 0 2 173,170, 0,173, -,-, 495238 DNA hAT-Charlie 627 chr5 5614110 5614797 CR1-F2 353 - 5614110 5614797 0 2 203,104, 0,583, -,-, 495243 LINE CR1 628 chr5 5665458 5667094 GGLTR11-int 831 - 5665458 5667094 0 2 1404,214, 0,1422, -,-, 495266 LTR ERV1 628 chr5 5701623 5706661 CR1-E 615 - 5701623 5706661 0 2 124,222, 0,4816, -,-, 495296 LINE CR1 628 chr5 5722786 5724166 GGERVL-A-int 737 - 5722786 5724166 0 2 475,905, 0,475, -,-, 495311 LTR ERVL 629 chr5 5789277 5790648 GGERVK1-int 298 + 5789277 5790648 0 2 263,84, 0,1287, +,+, 495355 LTR ERVK 629 chr5 5795503 5795561 (ATATTTA)n 544 + 5795503 5795561 0 2 24,8, 0,50, +,+, 495364 Simple_repeat Simple_repeat 629 chr5 5801648 5803102 GGLTR7-int 382 + 5801648 5803102 0 2 109,171, 0,1283, +,+, 495367 LTR ERV1 633 chr5 6331205 6335988 CR1-E 550 - 6331205 6335988 0 2 206,171, 0,4612, -,-, 495388 LINE CR1 633 chr5 6375045 6375860 CR1-Y 597 + 6375045 6375860 0 2 519,111, 0,704, +,+, 495424 LINE CR1 634 chr5 6439039 6440624 GGXHOI 475 + 6439039 6440624 0 2 716,854, 0,731, +,+, 495455 Satellite W-chromosome 634 chr5 6500942 6501501 CR1-X1 538 - 6500942 6501501 0 2 211,348, 0,211, -,-, 495482 LINE CR1 635 chr5 6610497 6612127 CR1-C4 531 + 6610497 6612127 0 2 269,1358, 0,272, +,+, 495534 LINE CR1 635 chr5 6659479 6659910 REP131 136 - 6659479 6659910 0 2 115,278, 0,153, -,-, 495566 DNA? DNA? 636 chr5 6718669 6720962 CR1-G 778 - 6718669 6720962 0 2 573,1407, 0,886, -,-, 495593 LINE CR1 636 chr5 6740403 6740680 CR1-Y2_Aves 525 - 6740403 6740680 0 2 143,134, 0,143, -,-, 495604 LINE CR1 636 chr5 6764066 6766136 CR1-D 719 + 6764066 6766136 0 2 640,1414, 0,656, +,+, 495620 LINE CR1 637 chr5 6886462 6887192 GGLTR4A 549 - 6886462 6887192 0 2 67,265, 0,465, -,-, 495663 LTR ERVL 637 chr5 6897085 6897760 CR1-F2 544 - 6897085 6897760 0 2 160,513, 0,162, -,-, 495673 LINE CR1 637 chr5 6899723 6900486 CR1-L3A_Croc 28 + 6899723 6900486 0 2 255,209, 0,554, +,+, 495675 LINE CR1 639 chr5 7088891 7091612 GGLTR11-int 414 + 7088891 7091612 0 3 1696,158,318, 0,2179,2403, +,+,+, 495741 LTR ERV1 639 chr5 7112409 7112924 Char12Mar1_GG 630 - 7112409 7112924 0 2 149,182, 0,333, -,-, 495752 DNA hAT-Charlie 639 chr5 7171377 7171721 CR1-X1 481 - 7171377 7171721 0 2 140,197, 0,147, -,-, 495777 LINE CR1 640 chr5 7301590 7303080 CR1-Y4 606 - 7301590 7303080 0 2 254,1236, 0,254, -,-, 495844 LINE CR1 640 chr5 7303198 7303695 CR1-C4 594 - 7303198 7303695 0 2 276,221, 0,276, -,-, 495845 LINE CR1 641 chr5 7455488 7461292 GGLTR3F1 863 - 7455488 7461292 0 2 5310,492, 0,5312, -,-, 495919 LTR ERVL 642 chr5 7492518 7493436 CR1-Y2_Aves 394 - 7492518 7493436 0 2 366,282, 0,636, -,-, 495933 LINE CR1 642 chr5 7581853 7582297 CR1-Y4 604 - 7581853 7582297 0 2 245,199, 0,245, -,-, 495958 LINE CR1 643 chr5 7714240 7714370 A-rich 486 + 7714240 7714370 0 2 47,39, 0,91, +,+, 496022 Low_complexity Low_complexity 644 chr5 7778382 7778480 A-rich 616 + 7778382 7778480 0 2 30,31, 0,67, +,+, 496057 Low_complexity Low_complexity 647 chr5 8171776 8172259 GGLTR5B 89 + 8171776 8172259 0 3 344,11,39, 0,365,444, +,+,+, 496227 LTR ERVL 648 chr5 8263037 8265353 GGERVL-A-int 676 + 8263037 8265353 0 2 552,1764, 0,552, +,+, 496259 LTR ERVL 648 chr5 8293102 8294487 CR1-X 227 + 8293102 8294487 0 2 164,1030, 0,355, +,+, 496267 LINE CR1 648 chr5 8321648 8321987 GGLTR5B 329 - 8321648 8321987 0 2 227,106, 0,233, -,-, 496283 LTR ERVL 648 chr5 8348089 8348382 CR1-Y4 650 - 8348089 8348382 0 2 94,199, 0,94, -,-, 496294 LINE CR1 649 chr5 8388772 8393676 CR1-C2 497 - 8388772 8393676 0 2 355,121, 0,4783, -,-, 496312 LINE CR1 651 chr5 8718509 8720671 Char12Mar1_GG 476 - 8718509 8720671 0 2 1013,311, 0,1851, -,-, 496464 DNA hAT-Charlie 652 chr5 8846147 8846949 Char12Mar1_GG 585 - 8846147 8846949 0 2 140,423, 0,379, -,-, 496516 DNA hAT-Charlie 652 chr5 8848403 8848991 CR1-E 517 - 8848403 8848991 0 2 527,61, 0,527, -,-, 496518 LINE CR1 652 chr5 8894900 8895212 Char12Mar1_GG 746 - 8894900 8895212 0 2 150,162, 0,150, -,-, 496540 DNA hAT-Charlie 653 chr5 8942127 8942167 (GTTTT)n 614 + 8942127 8942167 0 2 6,9, 0,31, +,+, 496556 Simple_repeat Simple_repeat 653 chr5 9013678 9014178 TguLTR5e 371 - 9013678 9014178 0 2 143,266, 0,234, -,-, 496585 LTR ERVL 654 chr5 9058512 9058814 CR1-Y1_Aves 509 + 9058512 9058814 0 2 76,187, 0,115, +,+, 496605 LINE CR1 655 chr5 9215767 9216797 Char12Mar1_GG 493 - 9215767 9216797 0 2 985,45, 0,985, -,-, 496689 DNA hAT-Charlie 655 chr5 9241305 9241417 (A)n 752 + 9241305 9241417 0 2 25,29, 0,83, +,+, 496695 Simple_repeat Simple_repeat 656 chr5 9342285 9343399 CR1-Y2_Aves 350 - 9342285 9343399 0 2 484,420, 0,694, -,-, 496720 LINE CR1 657 chr5 9466058 9466144 (TTGTTT)n 460 + 9466058 9466144 0 2 17,11, 0,75, +,+, 496775 Simple_repeat Simple_repeat 661 chr5 10062090 10063847 CR1-Y 545 + 10062090 10063847 0 2 190,1454, 0,303, +,+, 497022 LINE CR1 662 chr5 10151813 10152834 CR1-X1 445 + 10151813 10152834 0 2 616,405, 0,616, +,+, 497062 LINE CR1 662 chr5 10203044 10203465 CR1-X2 549 - 10203044 10203465 0 2 182,239, 0,182, -,-, 497079 LINE CR1 663 chr5 10340705 10341137 CR1-Y4 732 - 10340705 10341137 0 2 88,344, 0,88, -,-, 497122 LINE CR1 664 chr5 10463189 10463633 CR1-Y1_Aves 256 - 10463189 10463633 0 2 273,148, 0,296, -,-, 497186 LINE CR1 664 chr5 10475096 10475374 Char12Mar1_GG 621 - 10475096 10475374 0 2 120,158, 0,120, -,-, 497194 DNA hAT-Charlie 666 chr5 10644251 10645676 CR1-C4 710 - 10644251 10645676 0 2 34,1006, 0,419, -,-, 497270 LINE CR1 666 chr5 10729756 10742538 Char12Mar1_GG 484 - 10729756 10742538 0 2 92,84, 0,12698, -,-, 497320 DNA hAT-Charlie 667 chr5 10753235 10761253 Char12Mar1_GG 597 - 10753235 10761253 0 3 385,63,62, 0,385,7956, -,-,-, 497334 DNA hAT-Charlie 667 chr5 10864053 10865366 CR1-F2 331 - 10864053 10865366 0 2 35,62, 0,1251, -,-, 497407 LINE CR1 667 chr5 10874624 10875804 CR1-Y2_Aves 119 + 10874624 10875804 0 3 164,254,181, 0,611,999, +,+,+, 497417 LINE CR1 668 chr5 10909851 10911085 CR1-D2 636 + 10909851 10911085 0 2 360,145, 0,1089, +,+, 497434 LINE CR1 670 chr5 11156039 11157299 UCON66 360 - 11156039 11157299 0 2 73,185, 0,1075, -,-, 497576 Unknown Unknown 670 chr5 11186193 11186355 A-rich 518 + 11186193 11186355 0 2 31,68, 0,94, +,+, 497592 Low_complexity Low_complexity 671 chr5 11321032 11321663 CR1-C3 702 - 11321032 11321663 0 2 409,222, 0,409, -,-, 497672 LINE CR1 672 chr5 11419169 11420780 GGERVL-C-int 791 - 11419169 11420780 0 4 879,339,68,325, 0,879,1218,1286, -,-,-,-, 497722 LTR ERVL 672 chr5 11506569 11506640 GA-rich 362 + 11506569 11506640 0 2 15,16, 0,55, +,+, 497763 Low_complexity Low_complexity 673 chr5 11623421 11624530 CR1-F2 448 - 11623421 11624530 0 2 188,647, 0,462, -,-, 497813 LINE CR1 676 chr5 11993754 11998144 GGERV10_LTR 984 - 11993754 11998144 0 4 220,1596,2353,220, 0,220,1816,4170, -,-,-,-, 497934 LTR ERVL 677 chr5 12134423 12139095 GGERVL18-int 665 - 12134423 12139095 0 6 264,1236,320,1313,1084,297, 0,264,1500,1822,3135,4375, -,-,-,-,-,-, 497981 LTR ERVL 677 chr5 12159869 12160084 CR1-F 292 - 12159869 12160084 0 2 62,110, 0,105, -,-, 498000 LINE CR1 679 chr5 12377574 12379452 CR1-L3A_Croc 164 - 12377574 12379452 0 3 184,591,171, 0,260,1707, -,-,-, 498091 LINE CR1 679 chr5 12415138 12415807 CR1-F2 544 - 12415138 12415807 0 2 306,363, 0,306, -,-, 498100 LINE CR1 680 chr5 12508936 12509933 CR1-Y2_Aves 316 + 12508936 12509933 0 2 351,640, 0,357, +,+, 498137 LINE CR1 681 chr5 12624623 12624909 CR1-X2 329 - 12624623 12624909 0 2 157,126, 0,160, -,-, 498171 LINE CR1 685 chr5 13173852 13175087 CR1-Y3 507 + 13173852 13175087 0 2 42,95, 0,1140, +,+, 498375 LINE CR1 686 chr5 13279804 13279991 CR1-C3 283 + 13279804 13279991 0 2 82,95, 0,92, +,+, 498451 LINE CR1 686 chr5 13333518 13334735 CR1-X2 302 - 13333518 13334735 0 2 1010,181, 0,1036, -,-, 498479 LINE CR1 688 chr5 13527068 13527587 Mariner1b_GG 570 + 13527068 13527587 0 2 360,134, 0,385, +,+, 498580 DNA TcMar-Mariner 688 chr5 13537943 13539169 CR1-C3 561 - 13537943 13539169 0 2 264,962, 0,264, -,-, 498591 LINE CR1 688 chr5 13548131 13548452 Char12Mar1_GG 635 - 13548131 13548452 0 2 67,254, 0,67, -,-, 498594 DNA hAT-Charlie 689 chr5 13659022 13659512 CR1-D2 655 + 13659022 13659512 0 2 67,423, 0,67, +,+, 498646 LINE CR1 690 chr5 13769220 13769480 (GCGCC)n 378 + 13769220 13769480 0 2 143,81, 0,179, +,+, 498696 Simple_repeat Simple_repeat 690 chr5 13792063 13792412 GGLTR4A 386 - 13792063 13792412 0 2 88,229, 0,120, -,-, 498715 LTR ERVL 690 chr5 13889122 13890009 Mariner1_GG 490 - 13889122 13890009 0 2 490,397, 0,490, -,-, 498773 DNA TcMar-Mariner 692 chr5 14141701 14141879 (CCTC)n 336 + 14141701 14141879 0 2 15,15, 0,163, +,+, 498906 Simple_repeat Simple_repeat 693 chr5 14224570 14227410 CR1-F 309 - 14224570 14227410 0 2 1451,529, 0,2311, -,-, 498949 LINE CR1 694 chr5 14320988 14321444 GGLTR5A 469 + 14320988 14321444 0 2 282,117, 0,339, +,+, 498985 LTR ERVL 695 chr5 14424159 14425286 L2-1_AMi 120 + 14424159 14425286 0 2 28,439, 0,688, +,+, 499060 LINE L2 696 chr5 14641587 14641958 CR1-X1 621 + 14641587 14641958 0 2 267,104, 0,267, +,+, 499164 LINE CR1 697 chr5 14742429 14746675 CR1-C4 617 - 14742429 14746675 0 2 258,126, 0,4120, -,-, 499194 LINE CR1 87 chr5 14809397 14811579 REP131 152 - 14809397 14811579 0 2 852,111, 0,2071, -,-, 499249 DNA? DNA? 698 chr5 14816492 14818077 CR1-C4 420 + 14816492 14818077 0 2 1430,155, 0,1430, +,+, 499253 LINE CR1 699 chr5 15009971 15010436 CR1-Y1_Aves 218 - 15009971 15010436 0 2 161,171, 0,294, -,-, 499346 LINE CR1 699 chr5 15043073 15043190 (T)n 814 + 15043073 15043190 0 2 25,37, 0,80, +,+, 499363 Simple_repeat Simple_repeat 701 chr5 15235757 15236085 CR1-D 708 + 15235757 15236085 0 2 79,163, 0,165, +,+, 499443 LINE CR1 701 chr5 15329882 15330023 MIR1_Amn 166 + 15329882 15330023 0 2 78,11, 0,130, +,+, 499479 SINE MIR 703 chr5 15499547 15500000 L2-1_AMi 178 + 15499547 15500000 0 2 328,125, 0,328, +,+, 499537 LINE L2 703 chr5 15584657 15584994 Mariner1b_GG 539 - 15584657 15584994 0 2 260,77, 0,260, -,-, 499562 DNA TcMar-Mariner 704 chr5 15620323 15620777 CR1-D 580 - 15620323 15620777 0 2 374,80, 0,374, -,-, 499576 LINE CR1 706 chr5 15926640 15930221 CR1-F2 466 - 15926640 15930221 0 2 264,160, 0,3421, -,-, 499688 LINE CR1 706 chr5 15971171 15973707 GGLTR3F1 960 + 15971171 15973707 0 2 2042,494, 0,2042, +,+, 499705 LTR ERVL 707 chr5 16017996 16018193 CR1-X2 768 + 16017996 16018193 0 2 40,51, 0,146, +,+, 499731 LINE CR1 709 chr5 16353039 16353767 CR1-Y4 529 - 16353039 16353767 0 2 127,601, 0,127, -,-, 499852 LINE CR1 710 chr5 16409882 16411136 CR1-X1 612 + 16409882 16411136 0 3 141,963,150, 0,141,1104, +,+,+, 499887 LINE CR1 712 chr5 16695502 16699098 CR1-F2 397 - 16695502 16699098 0 2 170,172, 0,3424, -,-, 500004 LINE CR1 712 chr5 16758173 16758661 TguLTR5e 182 + 16758173 16758661 0 2 260,197, 0,291, +,+, 500048 LTR ERVL 713 chr5 16820142 16820823 CR1-X 521 + 16820142 16820823 0 3 197,74,406, 0,199,275, +,+,+, 500093 LINE CR1 714 chr5 16940388 16940629 CR1-F2 533 + 16940388 16940629 0 2 121,66, 0,175, +,+, 500142 LINE CR1 717 chr5 17319096 17319399 CR1-L3B_Croc 316 - 17319096 17319399 0 2 105,118, 0,185, -,-, 500321 LINE CR1 717 chr5 17339892 17352486 Char12Mar1_GG 571 - 17339892 17352486 0 2 64,553, 0,12041, -,-, 500331 DNA hAT-Charlie 718 chr5 17534125 17534174 (TTTC)n 526 + 17534125 17534174 0 2 8,14, 0,35, +,+, 500435 Simple_repeat Simple_repeat 719 chr5 17577225 17577610 GGLTR5A 417 + 17577225 17577610 0 2 173,212, 0,173, +,+, 500465 LTR ERVL 719 chr5 17635803 17635891 (T)n 765 + 17635803 17635891 0 2 24,23, 0,65, +,+, 500499 Simple_repeat Simple_repeat 719 chr5 17645277 17645890 CR1-F2 504 - 17645277 17645890 0 2 459,146, 0,467, -,-, 500505 LINE CR1 720 chr5 17728739 17728988 CR1-F2 520 + 17728739 17728988 0 2 78,171, 0,78, +,+, 500541 LINE CR1 721 chr5 17907543 17907962 CR1-F2 484 - 17907543 17907962 0 2 309,106, 0,313, -,-, 500621 LINE CR1 722 chr5 17963300 17963355 (TATATA)n 462 + 17963300 17963355 0 2 14,9, 0,46, +,+, 500656 Simple_repeat Simple_repeat 722 chr5 17964531 17964941 CR1-C4 666 + 17964531 17964941 0 2 97,313, 0,97, +,+, 500658 LINE CR1 722 chr5 17990446 17991396 CR1-C4 623 + 17990446 17991396 0 2 189,746, 0,204, +,+, 500670 LINE CR1 722 chr5 18009771 18010139 GGLTR8B 369 - 18009771 18010139 0 2 220,140, 0,228, -,-, 500677 LTR ERVL 722 chr5 18053299 18054283 Mariner1_GG 652 - 18053299 18054283 0 2 536,448, 0,536, -,-, 500705 DNA TcMar-Mariner 723 chr5 18114338 18117417 CR1-L3A_Croc 202 + 18114338 18117417 0 2 331,271, 0,2808, +,+, 500734 LINE CR1 725 chr5 18450401 18451900 CR1-F2 385 + 18450401 18451900 0 2 237,936, 0,563, +,+, 500869 LINE CR1 725 chr5 18460777 18461731 CR1-C4 550 - 18460777 18461731 0 2 479,475, 0,479, -,-, 500873 LINE CR1 727 chr5 18668450 18668892 GGLTR5A 531 - 18668450 18668892 0 2 206,236, 0,206, -,-, 500920 LTR ERVL 727 chr5 18683999 18686228 CR1-Y3 597 + 18683999 18686228 0 2 2001,223, 0,2006, +,+, 500925 LINE CR1 728 chr5 18841726 18841811 (TTCTTTT)n 214 + 18841726 18841811 0 2 6,55, 0,30, +,+, 500995 Simple_repeat Simple_repeat 728 chr5 18866213 18871560 CR1-L3A_Croc 233 + 18866213 18871560 0 2 122,65, 0,5282, +,+, 501005 LINE CR1 729 chr5 18889147 18889358 Char12Mar1_GG 644 - 18889147 18889358 0 2 53,147, 0,64, -,-, 501012 DNA hAT-Charlie 729 chr5 18926277 18926877 REP131 173 - 18926277 18926877 0 2 146,204, 0,396, -,-, 501024 DNA? DNA? 730 chr5 19042321 19042685 Mariner1_GG 681 - 19042321 19042685 0 2 174,190, 0,174, -,-, 501070 DNA TcMar-Mariner 730 chr5 19088485 19088819 GGLTR4B 716 + 19088485 19088819 0 2 239,78, 0,256, +,+, 501080 LTR ERVL 731 chr5 19160931 19162000 Char12Mar1_GG 588 - 19160931 19162000 0 2 659,410, 0,659, -,-, 501110 DNA hAT-Charlie 731 chr5 19231198 19231824 CR1-11_Crp 169 + 19231198 19231824 0 2 338,145, 0,481, +,+, 501135 LINE CR1 732 chr5 19362391 19362878 CR1-X1 500 - 19362391 19362878 0 2 156,331, 0,156, -,-, 501184 LINE CR1 733 chr5 19485407 19486513 GGLTR3C2 378 + 19485407 19486513 0 2 449,69, 0,1037, +,+, 501229 LTR ERVL 733 chr5 19501712 19502831 CR1-F2 405 - 19501712 19502831 0 2 66,251, 0,868, -,-, 501233 LINE CR1 734 chr5 19550259 19550558 CR1-E 699 + 19550259 19550558 0 2 124,175, 0,124, +,+, 501249 LINE CR1 735 chr5 19673617 19673748 CR1-Y 586 - 19673617 19673748 0 2 51,80, 0,51, -,-, 501297 LINE CR1 735 chr5 19717373 19717418 (ATACAC)n 502 + 19717373 19717418 0 2 10,10, 0,35, +,+, 501330 Simple_repeat Simple_repeat 735 chr5 19781037 19781380 CR1-Y3 655 + 19781037 19781380 0 2 128,215, 0,128, +,+, 501381 LINE CR1 736 chr5 19800592 19801331 CR1-F2 465 + 19800592 19801331 0 2 423,316, 0,423, +,+, 501395 LINE CR1 737 chr5 20019336 20019417 CR1-C4 835 + 20019336 20019417 0 2 39,42, 0,39, +,+, 501532 LINE CR1 738 chr5 20094685 20094789 (T)n 777 + 20094685 20094789 0 2 27,32, 0,72, +,+, 501597 Simple_repeat Simple_repeat 738 chr5 20114634 20115721 CR1-C4 509 + 20114634 20115721 0 2 142,945, 0,142, +,+, 501619 LINE CR1 738 chr5 20172678 20174573 Char12Mar1_GG 505 - 20172678 20174573 0 3 612,242,333, 0,622,1562, -,-,-, 501664 DNA hAT-Charlie 739 chr5 20190379 20192956 Mariner1b_GG 526 - 20190379 20192956 0 2 216,197, 0,2380, -,-, 501679 DNA TcMar-Mariner 739 chr5 20235518 20235664 (AT)n 815 + 20235518 20235664 0 2 87,39, 0,107, +,+, 501717 Simple_repeat Simple_repeat 739 chr5 20296461 20296508 (CCTC)n 516 + 20296461 20296508 0 2 16,10, 0,37, +,+, 501778 Simple_repeat Simple_repeat 741 chr5 20449753 20450813 TguLTR5e 275 + 20449753 20450813 0 2 283,274, 0,786, +,+, 501910 LTR ERVL 741 chr5 20464126 20464879 CR1-X2 201 - 20464126 20464879 0 2 622,65, 0,688, -,-, 501924 LINE CR1 741 chr5 20496821 20496948 A-rich 539 + 20496821 20496948 0 2 37,39, 0,88, +,+, 501959 Low_complexity Low_complexity 742 chr5 20580304 20582354 CR1-L3B_Croc 369 - 20580304 20582354 0 4 101,108,57,105, 0,274,1547,1945, -,-,-,-, 502020 LINE CR1 742 chr5 20675521 20676061 GGLTR5A 464 + 20675521 20676061 0 2 300,138, 0,402, +,+, 502078 LTR ERVL 743 chr5 20772964 20773550 CR1-Y2_Aves 197 + 20772964 20773550 0 2 93,491, 0,95, +,+, 502164 LINE CR1 744 chr5 20861033 20861387 CR1-Y4 630 - 20861033 20861387 0 2 307,47, 0,307, -,-, 502233 LINE CR1 744 chr5 20862225 20862813 Char12Mar1_GG 546 + 20862225 20862813 0 2 364,194, 0,394, +,+, 502234 DNA hAT-Charlie 745 chr5 20993386 20994492 CR1-Y4 433 - 20993386 20994492 0 2 471,635, 0,471, -,-, 502307 LINE CR1 745 chr5 21059427 21059799 Char12Mar1_GG 626 - 21059427 21059799 0 2 147,225, 0,147, -,-, 502335 DNA hAT-Charlie 745 chr5 21079119 21079205 (T)n 952 + 21079119 21079205 0 2 19,22, 0,64, +,+, 502341 Simple_repeat Simple_repeat 745 chr5 21080844 21084408 CR1-D2 553 - 21080844 21084408 0 3 380,86,899, 0,2579,2665, -,-,-, 502342 LINE CR1 746 chr5 21105734 21106567 GGLTR8B 275 + 21105734 21106567 0 2 537,266, 0,567, +,+, 502355 LTR ERVL 746 chr5 21108558 21110170 CR1-Y2_Aves 255 + 21108558 21110170 0 3 297,164,399, 0,297,1213, +,+,+, 502356 LINE CR1 746 chr5 21141312 21142064 TguLTR5e 387 + 21141312 21142064 0 2 125,127, 0,625, +,+, 502365 LTR ERVL 746 chr5 21144022 21144140 GGLTR3B1 797 - 21144022 21144140 0 2 66,45, 0,73, -,-, 502369 LTR ERVL 746 chr5 21146445 21146676 GGLTR5A 512 - 21146445 21146676 0 2 53,178, 0,53, -,-, 502370 LTR ERVL 746 chr5 21165027 21165988 CR1-Y2_Aves 201 - 21165027 21165988 0 2 182,135, 0,826, -,-, 502383 LINE CR1 746 chr5 21167719 21168916 CR1-C4 604 - 21167719 21168916 0 2 242,929, 0,268, -,-, 502386 LINE CR1 746 chr5 21169840 21172350 CR1-H 576 + 21169840 21172350 0 2 179,2293, 0,217, +,+, 502388 LINE CR1 747 chr5 21316818 21317204 GGLTR4A 614 + 21316818 21317204 0 2 171,165, 0,221, +,+, 502470 LTR ERVL 748 chr5 21368878 21368925 (TG)n 504 + 21368878 21368925 0 2 6,19, 0,28, +,+, 502501 Simple_repeat Simple_repeat 748 chr5 21380632 21380736 (T)n 877 + 21380632 21380736 0 2 24,27, 0,77, +,+, 502505 Simple_repeat Simple_repeat 748 chr5 21425139 21425963 CR1-Y2_Aves 148 - 21425139 21425963 0 2 243,418, 0,406, -,-, 502523 LINE CR1 749 chr5 21521515 21521582 (TTCT)n 598 + 21521515 21521582 0 2 11,7, 0,60, +,+, 502579 Simple_repeat Simple_repeat 750 chr5 21644396 21645071 GGLTR8B 510 + 21644396 21645071 0 2 423,252, 0,423, +,+, 502625 LTR ERVL 750 chr5 21674202 21674742 CR1-C4 655 - 21674202 21674742 0 2 305,235, 0,305, -,-, 502635 LINE CR1 750 chr5 21684480 21685431 CR1-L3B_Croc 194 - 21684480 21685431 0 2 472,93, 0,858, -,-, 502642 LINE CR1 751 chr5 21781089 21781280 CR1-L3B_Croc 0 - 21781089 21781280 0 2 53,63, 0,128, -,-, 502674 LINE CR1 751 chr5 21790409 21792055 CR1-D2 690 + 21790409 21792055 0 2 215,1091, 0,555, +,+, 502679 LINE CR1 752 chr5 21911768 21911815 (TTA)n 396 + 21911768 21911815 0 2 10,7, 0,40, +,+, 502745 Simple_repeat Simple_repeat 752 chr5 21933784 21934528 CR1-F2 476 + 21933784 21934528 0 2 319,82, 0,662, +,+, 502755 LINE CR1 752 chr5 21962884 21964115 GGLTR11-int 339 - 21962884 21964115 0 2 170,719, 0,512, -,-, 502764 LTR ERV1 754 chr5 22264111 22265095 CR1-L3B_Croc 328 + 22264111 22265095 0 2 342,121, 0,863, +,+, 502862 LINE CR1 754 chr5 22275068 22276160 CR1-L3B_Croc 257 + 22275068 22276160 0 3 167,126,135, 0,194,957, +,+,+, 502869 LINE CR1 754 chr5 22279608 22280876 CR1-L3A_Croc 331 + 22279608 22280876 0 3 132,224,102, 0,537,1166, +,+,+, 502871 LINE CR1 755 chr5 22319568 22320650 CR1-Y2_Aves 385 - 22319568 22320650 0 2 194,828, 0,254, -,-, 502895 LINE CR1 756 chr5 22491146 22491377 GGLTR3A 944 + 22491146 22491377 0 2 108,109, 0,122, +,+, 502994 LTR ERVL 758 chr5 22677592 22678407 CR1-Y2_Aves 259 - 22677592 22678407 0 2 569,211, 0,604, -,-, 503097 LINE CR1 758 chr5 22722493 22723289 CR1-11_Crp 202 - 22722493 22723289 0 2 235,291, 0,505, -,-, 503121 LINE CR1 758 chr5 22770382 22770911 GGLTR5B 630 + 22770382 22770911 0 2 343,151, 0,378, +,+, 503140 LTR ERVL 759 chr5 22875256 22877831 CR1-F2 432 + 22875256 22877831 0 2 2113,462, 0,2113, +,+, 503189 LINE CR1 759 chr5 22893026 22893988 Char12Mar1_GG 437 - 22893026 22893988 0 2 804,149, 0,813, -,-, 503197 DNA hAT-Charlie 760 chr5 22974022 22977032 Mariner1_GG 644 - 22974022 22977032 0 2 279,692, 0,2318, -,-, 503235 DNA TcMar-Mariner 761 chr5 23069251 23070724 CR1-Y2_Aves 346 - 23069251 23070724 0 2 506,967, 0,506, -,-, 503277 LINE CR1 762 chr5 23287304 23290104 CR1-D2 528 - 23287304 23290104 0 2 40,417, 0,2383, -,-, 503386 LINE CR1 765 chr5 23595356 23596019 CR1-Y4 593 - 23595356 23596019 0 2 365,298, 0,365, -,-, 503486 LINE CR1 765 chr5 23697060 23697441 GGLTR4B 574 + 23697060 23697441 0 2 240,109, 0,272, +,+, 503536 LTR ERVL 769 chr5 24168973 24169293 CR1-Y1_Aves 343 - 24168973 24169293 0 2 257,63, 0,257, -,-, 503731 LINE CR1 771 chr5 24433661 24434539 CR1-8_Crp 41 - 24433661 24434539 0 2 267,378, 0,500, -,-, 503839 LINE CR1 771 chr5 24509227 24509347 (C)n 803 + 24509227 24509347 0 2 30,29, 0,91, +,+, 503865 Simple_repeat Simple_repeat 772 chr5 24516665 24517084 GGLTR3C1 396 - 24516665 24517084 0 2 80,180, 0,239, -,-, 503867 LTR ERVL 772 chr5 24533216 24533556 GGLTR8B 456 - 24533216 24533556 0 2 111,229, 0,111, -,-, 503873 LTR ERVL 772 chr5 24577705 24578773 Char12Mar1_GG 422 - 24577705 24578773 0 2 414,635, 0,433, -,-, 503888 DNA hAT-Charlie 773 chr5 24760145 24762380 CR1-L3A_Croc 241 - 24760145 24762380 0 5 91,211,238,311,236, 0,197,877,1207,1999, -,-,-,-,-, 503973 LINE CR1 774 chr5 24826531 24827358 CR1-Y2_Aves 114 - 24826531 24827358 0 2 280,459, 0,368, -,-, 503993 LINE CR1 775 chr5 24910210 24911068 CR1-L3B_Croc 273 + 24910210 24911068 0 2 106,216, 0,642, +,+, 504030 LINE CR1 775 chr5 24986329 24986924 CR1-D 721 - 24986329 24986924 0 2 504,91, 0,504, -,-, 504062 LINE CR1 775 chr5 25000424 25000951 AmnSINE1 286 + 25000424 25000951 0 2 67,224, 0,303, +,+, 504069 SINE 5S-Deu-L2 775 chr5 25031550 25031614 (TGTT)n 576 + 25031550 25031614 0 2 9,15, 0,49, +,+, 504081 Simple_repeat Simple_repeat 776 chr5 25035955 25036556 GGLTR11 506 + 25035955 25036556 0 2 44,320, 0,281, +,+, 504084 LTR ERV1 778 chr5 25323205 25323277 (CCGCT)n 390 + 25323205 25323277 0 2 11,10, 0,62, +,+, 504187 Simple_repeat Simple_repeat 779 chr5 25546795 25547138 TguLTR5d 299 - 25546795 25547138 0 2 208,73, 0,270, -,-, 504275 LTR ERVL 781 chr5 25705927 25706552 GGERV22_LTR 600 - 25705927 25706552 0 2 160,188, 0,437, -,-, 504334 LTR ERVL 782 chr5 25846424 25847235 CR1-Y2_Aves 262 + 25846424 25847235 0 3 129,47,323, 0,153,488, +,+,+, 504374 LINE CR1 784 chr5 26090908 26091657 CR1-Y2_Aves 116 - 26090908 26091657 0 2 185,313, 0,436, -,-, 504458 LINE CR1 784 chr5 26120107 26120198 (AACA)n 550 + 26120107 26120198 0 2 15,14, 0,77, +,+, 504469 Simple_repeat Simple_repeat 784 chr5 26180344 26180685 GGLTR5A 353 - 26180344 26180685 0 2 130,193, 0,148, -,-, 504490 LTR ERVL 785 chr5 26227989 26229096 CR1-Y2_Aves 323 + 26227989 26229096 0 2 157,540, 0,567, +,+, 504506 LINE CR1 785 chr5 26275295 26277861 CR1-X1 567 + 26275295 26277861 0 2 2140,426, 0,2140, +,+, 504513 LINE CR1 786 chr5 26397560 26397700 (TTCTCT)n 420 + 26397560 26397700 0 2 38,13, 0,127, +,+, 504548 Simple_repeat Simple_repeat 787 chr5 26500086 26501058 CR1-11_Crp 96 - 26500086 26501058 0 2 511,327, 0,645, -,-, 504594 LINE CR1 788 chr5 26673222 26673655 UCON64 358 - 26673222 26673655 0 2 120,86, 0,347, -,-, 504682 Unknown Unknown 789 chr5 26826527 26827261 REP131 110 - 26826527 26827261 0 2 209,417, 0,317, -,-, 504741 DNA? DNA? 791 chr5 27076790 27085390 Char12Mar1_GG 742 - 27076790 27085390 0 2 332,47, 0,8553, -,-, 504851 DNA hAT-Charlie 99 chr5 27524689 27526497 Charlie12_GG 634 - 27524689 27526497 0 3 1474,41,292, 0,1475,1516, -,-,-, 505041 DNA hAT-Charlie 796 chr5 27694562 27694848 CR1-D2 661 + 27694562 27694848 0 2 87,199, 0,87, +,+, 505106 LINE CR1 797 chr5 27806571 27807313 CR1-F2 589 + 27806571 27807313 0 2 659,83, 0,659, +,+, 505150 LINE CR1 797 chr5 27859456 27859791 CR1-D2 589 - 27859456 27859791 0 2 179,156, 0,179, -,-, 505165 LINE CR1 798 chr5 28006497 28006839 CR1-Y1_Aves 496 + 28006497 28006839 0 2 156,181, 0,161, +,+, 505216 LINE CR1 799 chr5 28101982 28102084 (GCCCGCC)n 390 + 28101982 28102084 0 2 16,21, 0,81, +,+, 505243 Simple_repeat Simple_repeat 801 chr5 28354252 28354881 CR1-D2 535 + 28354252 28354881 0 2 384,245, 0,384, +,+, 505340 LINE CR1 801 chr5 28388165 28388353 CR1-Y2 353 + 28388165 28388353 0 2 98,79, 0,109, +,+, 505363 LINE CR1 801 chr5 28436401 28436927 CR1-X1 391 + 28436401 28436927 0 2 206,222, 0,304, +,+, 505385 LINE CR1 802 chr5 28534292 28535249 CR1-11_Crp 98 + 28534292 28535249 0 2 353,226, 0,731, +,+, 505427 LINE CR1 100 chr5 28704423 28704943 TguLTR5e 198 + 28704423 28704943 0 2 277,218, 0,302, +,+, 505498 LTR ERVL 804 chr5 28800299 28802535 CR1-L3B_Croc 116 - 28800299 28802535 0 2 2004,221, 0,2015, -,-, 505533 LINE CR1 804 chr5 28804521 28806168 Mariner1_GG 618 - 28804521 28806168 0 2 1234,91, 0,1556, -,-, 505534 DNA TcMar-Mariner 806 chr5 29004398 29004738 TguLTR5e 278 - 29004398 29004738 0 2 124,154, 0,186, -,-, 505617 LTR ERVL 807 chr5 29099429 29099824 CR1-X2 315 + 29099429 29099824 0 2 118,277, 0,118, +,+, 505658 LINE CR1 807 chr5 29114215 29114526 L2-3_Crp 282 - 29114215 29114526 0 2 120,101, 0,210, -,-, 505663 LINE L2 807 chr5 29204274 29205532 Charlie12_GG 537 - 29204274 29205532 0 2 530,671, 0,587, -,-, 505705 DNA hAT-Charlie 808 chr5 29236087 29236852 CR1-Y2_Aves 122 - 29236087 29236852 0 2 345,420, 0,345, -,-, 505724 LINE CR1 808 chr5 29274341 29275211 CR1-Y1_Aves 342 - 29274341 29275211 0 2 388,467, 0,403, -,-, 505750 LINE CR1 808 chr5 29313035 29313681 CR1-Y1_Aves 519 - 29313035 29313681 0 3 65,96,117, 0,431,529, -,-,-, 505768 LINE CR1 808 chr5 29315134 29315723 CR1-Y1_Aves 481 + 29315134 29315723 0 2 216,367, 0,222, +,+, 505770 LINE CR1 811 chr5 29664569 29664971 CR1-C4 643 - 29664569 29664971 0 2 183,194, 0,208, -,-, 505944 LINE CR1 811 chr5 29667945 29668390 CR1-E 767 + 29667945 29668390 0 2 332,113, 0,332, +,+, 505947 LINE CR1 812 chr5 29805447 29806521 Mariner1_GG 579 - 29805447 29806521 0 2 452,614, 0,460, -,-, 506029 DNA TcMar-Mariner 812 chr5 29820761 29821929 CR1-Y2_Aves 63 - 29820761 29821929 0 2 373,268, 0,900, -,-, 506035 LINE CR1 814 chr5 30126740 30127305 CR1-L3B_Croc 221 + 30126740 30127305 0 2 100,184, 0,381, +,+, 506174 LINE CR1 815 chr5 30159705 30160041 CR1-X2 495 + 30159705 30160041 0 2 92,244, 0,92, +,+, 506185 LINE CR1 815 chr5 30247773 30247885 A-rich 549 + 30247773 30247885 0 2 27,48, 0,64, +,+, 506235 Low_complexity Low_complexity 816 chr5 30302164 30303913 CR1-Y2_Aves 223 - 30302164 30303913 0 2 497,1052, 0,697, -,-, 506281 LINE CR1 816 chr5 30336641 30337827 CR1-Y2_Aves 199 - 30336641 30337827 0 2 148,1038, 0,148, -,-, 506311 LINE CR1 816 chr5 30375855 30376037 Char12Mar1_GG 645 - 30375855 30376037 0 2 43,136, 0,46, -,-, 506337 DNA hAT-Charlie 817 chr5 30429865 30430730 CR1-C4 686 + 30429865 30430730 0 2 180,90, 0,775, +,+, 506366 LINE CR1 817 chr5 30536573 30537058 TguLTR5e 413 + 30536573 30537058 0 2 292,98, 0,387, +,+, 506434 LTR ERVL 818 chr5 30589860 30590162 CR1-F2 525 + 30589860 30590162 0 2 22,96, 0,206, +,+, 506467 LINE CR1 819 chr5 30671423 30672097 REP131 219 - 30671423 30672097 0 2 243,160, 0,514, -,-, 506515 DNA? DNA? 819 chr5 30776020 30776477 CR1-Y1_Aves 174 + 30776020 30776477 0 2 248,134, 0,323, +,+, 506566 LINE CR1 820 chr5 30835665 30836340 CR1-E 807 + 30835665 30836340 0 2 287,388, 0,287, +,+, 506605 LINE CR1 820 chr5 30842520 30842847 Charlie12_GG 452 - 30842520 30842847 0 2 153,60, 0,267, -,-, 506616 DNA hAT-Charlie 822 chr5 31088193 31088345 A-rich 589 + 31088193 31088345 0 2 40,52, 0,100, +,+, 506762 Low_complexity Low_complexity 822 chr5 31129546 31130202 CR1-H 754 + 31129546 31130202 0 2 44,468, 0,188, +,+, 506789 LINE CR1 822 chr5 31193997 31194920 CR1-C3 669 - 31193997 31194920 0 2 79,598, 0,325, -,-, 506832 LINE CR1 823 chr5 31209797 31211300 CR1-L3A_Croc 110 + 31209797 31211300 0 2 480,179, 0,1324, +,+, 506842 LINE CR1 823 chr5 31213293 31214326 CR1-C4 552 - 31213293 31214326 0 2 673,360, 0,673, -,-, 506844 LINE CR1 824 chr5 31398823 31399395 LFSINE_Vert 429 - 31398823 31399395 0 2 149,57, 0,515, -,-, 506970 SINE tRNA 825 chr5 31458993 31459062 A-rich 494 + 31458993 31459062 0 2 14,22, 0,47, +,+, 507024 Low_complexity Low_complexity 825 chr5 31525621 31525667 (TTTTA)n 412 + 31525621 31525667 0 2 22,6, 0,40, +,+, 507063 Simple_repeat Simple_repeat 825 chr5 31532791 31536914 CR1-Y1_Aves 348 - 31532791 31536914 0 2 305,107, 0,4016, -,-, 507069 LINE CR1 825 chr5 31570896 31571201 CR1-Y2 162 - 31570896 31571201 0 2 34,121, 0,184, -,-, 507096 LINE CR1 825 chr5 31581586 31582018 CR1-11_Crp 433 + 31581586 31582018 0 2 46,180, 0,252, +,+, 507103 LINE CR1 826 chr5 31664619 31665214 Char12Mar1_GG 516 - 31664619 31665214 0 2 126,434, 0,161, -,-, 507166 DNA hAT-Charlie 826 chr5 31712602 31713515 GGLTR8B 148 + 31712602 31713515 0 2 229,126, 0,787, +,+, 507187 LTR ERVL 827 chr5 31720125 31721918 CR1-E 664 + 31720125 31721918 0 3 929,149,125, 0,1519,1668, +,+,+, 507196 LINE CR1 827 chr5 31753715 31754464 GGLTR12C 501 - 31753715 31754464 0 2 249,100, 0,649, -,-, 507220 LTR ERVL 828 chr5 31884413 31884589 GGLTR3B4 635 + 31884413 31884589 0 2 149,27, 0,149, +,+, 507319 LTR ERVL 828 chr5 31950040 31950710 CR1-Y3 690 - 31950040 31950710 0 2 294,272, 0,398, -,-, 507362 LINE CR1 829 chr5 32006961 32007032 (T)n 873 + 32006961 32007032 0 2 26,18, 0,53, +,+, 507403 Simple_repeat Simple_repeat 829 chr5 32044393 32044965 Char12Mar1_GG 524 + 32044393 32044965 0 2 118,425, 0,147, +,+, 507430 DNA hAT-Charlie 829 chr5 32048306 32048956 GGLTR5B 370 + 32048306 32048956 0 2 142,281, 0,369, +,+, 507433 LTR ERVL 829 chr5 32053957 32054590 GGLTR8B 314 - 32053957 32054590 0 2 100,484, 0,149, -,-, 507438 LTR ERVL 832 chr5 32403775 32403848 (T)n 960 + 32403775 32403848 0 2 26,24, 0,49, +,+, 507676 Simple_repeat Simple_repeat 832 chr5 32417542 32419678 CR1-E 661 - 32417542 32419678 0 2 639,581, 0,1555, -,-, 507690 LINE CR1 832 chr5 32421381 32423579 GGLTR4B 527 + 32421381 32423579 0 3 173,122,116, 0,258,2082, +,+,+, 507694 LTR ERVL 832 chr5 32424785 32426922 CR1-G 807 + 32424785 32426922 0 2 1579,543, 0,1594, +,+, 507697 LINE CR1 832 chr5 32496901 32499364 CR1-C 686 - 32496901 32499364 0 2 1759,704, 0,1759, -,-, 507747 LINE CR1 833 chr5 32569573 32576524 Char12Mar1_GG 693 - 32569573 32576524 0 2 178,40, 0,6911, -,-, 507801 DNA hAT-Charlie 833 chr5 32587145 32587569 TguLTR5d 376 - 32587145 32587569 0 2 267,104, 0,320, -,-, 507817 LTR ERVL 833 chr5 32602708 32603715 CR1-F2 590 - 32602708 32603715 0 2 413,491, 0,516, -,-, 507825 LINE CR1 833 chr5 32617400 32618799 Char12Mar1_GG 596 - 32617400 32618799 0 2 138,440, 0,959, -,-, 507842 DNA hAT-Charlie 834 chr5 32694467 32695534 CR1-C3 654 - 32694467 32695534 0 2 618,428, 0,639, -,-, 507909 LINE CR1 834 chr5 32699356 32699680 GGERV10_LTR 640 + 32699356 32699680 0 2 62,159, 0,165, +,+, 507917 LTR ERVL 834 chr5 32708666 32710477 CR1-F2 562 + 32708666 32710477 0 3 462,309,485, 0,1017,1326, +,+,+, 507924 LINE CR1 834 chr5 32739482 32740938 GGLTR3B2 693 - 32739482 32740938 0 3 96,442,96, 0,96,1360, -,-,-, 507952 LTR ERVL 834 chr5 32742978 32743275 CR1-C4 625 - 32742978 32743275 0 2 225,68, 0,229, -,-, 507955 LINE CR1 834 chr5 32753988 32755097 CR1-C4 683 + 32753988 32755097 0 2 72,88, 0,1021, +,+, 507970 LINE CR1 835 chr5 32775302 32776935 CR1-E 612 + 32775302 32776935 0 2 674,650, 0,983, +,+, 507989 LINE CR1 835 chr5 32827055 32828514 CR1-Y2_Aves 348 + 32827055 32828514 0 2 551,302, 0,1157, +,+, 508018 LINE CR1 835 chr5 32828543 32829086 CR1-Y1_Aves 338 + 32828543 32829086 0 2 298,221, 0,322, +,+, 508020 LINE CR1 835 chr5 32853655 32853996 CR1-C4 517 + 32853655 32853996 0 2 185,155, 0,186, +,+, 508043 LINE CR1 835 chr5 32861391 32861661 CR1-E 824 + 32861391 32861661 0 2 28,242, 0,28, +,+, 508053 LINE CR1 836 chr5 32961539 32962875 CR1-E 650 + 32961539 32962875 0 3 311,909,116, 0,311,1220, +,+,+, 508120 LINE CR1 837 chr5 33145782 33146415 GGLTR5B 176 + 33145782 33146415 0 2 474,115, 0,518, +,+, 508255 LTR ERVL 837 chr5 33148530 33149642 Mariner1_GG 611 - 33148530 33149642 0 2 287,812, 0,300, -,-, 508259 DNA TcMar-Mariner 838 chr5 33212414 33212912 CR1-C 846 + 33212414 33212912 0 2 333,165, 0,333, +,+, 508307 LINE CR1 838 chr5 33222758 33223374 CR1-D2 647 - 33222758 33223374 0 2 244,372, 0,244, -,-, 508322 LINE CR1 838 chr5 33276117 33276870 GGLTR12C 353 - 33276117 33276870 0 2 176,106, 0,647, -,-, 508377 LTR ERVL 839 chr5 33296964 33298027 CR1-E 394 - 33296964 33298027 0 3 101,390,194, 0,115,869, -,-,-, 508390 LINE CR1 839 chr5 33315316 33315540 GGLTR4A 126 - 33315316 33315540 0 2 108,79, 0,145, -,-, 508406 LTR ERVL 839 chr5 33353938 33356501 GGERVL18-int 647 + 33353938 33356501 0 3 342,1141,1072, 0,350,1491, +,+,+, 508440 LTR ERVL 839 chr5 33409674 33412701 CR1-F0 725 - 33409674 33412701 0 2 495,2532, 0,495, -,-, 508479 LINE CR1 840 chr5 33499207 33499370 Char12Mar1_GG 680 - 33499207 33499370 0 2 125,35, 0,128, -,-, 508528 DNA hAT-Charlie 840 chr5 33521011 33521227 CR1-L3B_Croc 342 - 33521011 33521227 0 2 108,77, 0,139, -,-, 508540 LINE CR1 841 chr5 33555656 33555853 G-rich 533 + 33555656 33555853 0 2 142,41, 0,156, +,+, 508572 Low_complexity Low_complexity 841 chr5 33598214 33598726 CR1-E 689 - 33598214 33598726 0 2 100,412, 0,100, -,-, 508599 LINE CR1 841 chr5 33655914 33656479 GGLTR10D-int 889 + 33655914 33656479 0 2 197,365, 0,200, +,+, 508626 LTR ERVK 841 chr5 33659506 33660005 CR1-D2 512 + 33659506 33660005 0 2 146,353, 0,146, +,+, 508628 LINE CR1 842 chr5 33733622 33734326 CR1-L3B_Croc 298 - 33733622 33734326 0 2 172,312, 0,392, -,-, 508666 LINE CR1 842 chr5 33754373 33754708 UCON31 297 + 33754373 33754708 0 2 135,142, 0,193, +,+, 508676 Unknown Unknown 842 chr5 33770542 33771466 Char12Mar1_GG 648 - 33770542 33771466 0 2 162,135, 0,789, -,-, 508692 DNA hAT-Charlie 842 chr5 33790644 33792044 CR1-Y3 647 - 33790644 33792044 0 2 436,256, 0,1144, -,-, 508707 LINE CR1 842 chr5 33809916 33811335 CR1-D2 554 - 33809916 33811335 0 2 542,877, 0,542, -,-, 508716 LINE CR1 843 chr5 33818084 33818693 CR1-11_Crp 215 - 33818084 33818693 0 2 185,204, 0,405, -,-, 508721 LINE CR1 843 chr5 33818888 33818962 (TCTGTT)n 350 + 33818888 33818962 0 2 17,15, 0,59, +,+, 508722 Simple_repeat Simple_repeat 843 chr5 33872094 33872885 CR1-C2 624 - 33872094 33872885 0 2 17,598, 0,193, -,-, 508759 LINE CR1 843 chr5 33874971 33876092 CR1-H 810 + 33874971 33876092 0 2 331,790, 0,331, +,+, 508762 LINE CR1 843 chr5 33879720 33890942 Char12Mar1_GG 508 - 33879720 33890942 0 2 537,437, 0,10785, -,-, 508763 DNA hAT-Charlie 843 chr5 33924585 33926839 CR1-D 702 - 33924585 33926839 0 2 1518,736, 0,1518, -,-, 508797 LINE CR1 844 chr5 33962118 33962196 (GGC)n 250 + 33962118 33962196 0 2 14,42, 0,36, +,+, 508824 Simple_repeat Simple_repeat 844 chr5 33973015 33973179 Char12Mar1_GG 508 - 33973015 33973179 0 2 58,106, 0,58, -,-, 508831 DNA hAT-Charlie 844 chr5 34019494 34020083 GGLTR3C2 608 - 34019494 34020083 0 2 545,18, 0,571, -,-, 508867 LTR ERVL 844 chr5 34057165 34058953 CR1-Y1_Aves 445 - 34057165 34058953 0 2 136,553, 0,1235, -,-, 508899 LINE CR1 844 chr5 34057306 34058403 CR1-D 721 - 34057306 34058403 0 2 316,586, 0,511, -,-, 508900 LINE CR1 844 chr5 34067977 34068485 TguLTR5e 298 + 34067977 34068485 0 2 264,200, 0,308, +,+, 508909 LTR ERVL 845 chr5 34167919 34169182 CR1-C2 498 - 34167919 34169182 0 2 72,1185, 0,78, -,-, 508962 LINE CR1 845 chr5 34183235 34183613 Char12Mar1_GG 539 - 34183235 34183613 0 2 175,203, 0,175, -,-, 508968 DNA hAT-Charlie 851 chr5 34914968 34915158 CR1-F2 686 - 34914968 34915158 0 2 112,71, 0,119, -,-, 509320 LINE CR1 852 chr5 35123404 35123946 CR1-Y2_Aves 320 - 35123404 35123946 0 2 227,304, 0,238, -,-, 509454 LINE CR1 853 chr5 35156072 35156822 CR1-C4 448 - 35156072 35156822 0 2 656,94, 0,656, -,-, 509473 LINE CR1 853 chr5 35183424 35184233 Chompy-6_Croc 95 - 35183424 35184233 0 2 94,214, 0,595, -,-, 509488 DNA PIF-Harbinger 854 chr5 35260493 35261261 CR1-Y2_Aves 213 - 35260493 35261261 0 3 16,33,87, 0,369,681, -,-,-, 509532 LINE CR1 854 chr5 35287460 35289917 CR1-L3B_Croc 406 + 35287460 35289917 0 2 429,59, 0,2398, +,+, 509548 LINE CR1 854 chr5 35288181 35288813 CR1-D2 631 - 35288181 35288813 0 3 297,259,68, 0,297,564, -,-,-, 509549 LINE CR1 854 chr5 35329800 35330950 CR1-11_Crp 194 + 35329800 35330950 0 2 182,155, 0,995, +,+, 509579 LINE CR1 854 chr5 35346580 35346687 A-rich 637 + 35346580 35346687 0 2 35,27, 0,80, +,+, 509588 Low_complexity Low_complexity 855 chr5 35455140 35455713 CR1-H 288 + 35455140 35455713 0 2 296,277, 0,296, +,+, 509656 LINE CR1 856 chr5 35539764 35540104 Mariner1b_GG 536 - 35539764 35540104 0 2 188,152, 0,188, -,-, 509703 DNA TcMar-Mariner 856 chr5 35574590 35575256 Char12Mar1_GG 644 - 35574590 35575256 0 2 137,221, 0,445, -,-, 509726 DNA hAT-Charlie 856 chr5 35574738 35575039 CR1-C3 779 + 35574738 35575039 0 2 241,60, 0,241, +,+, 509727 LINE CR1 857 chr5 35679176 35679799 CR1-D 633 - 35679176 35679799 0 2 461,162, 0,461, -,-, 509791 LINE CR1 858 chr5 35812668 35825403 Char12Mar1_GG 671 - 35812668 35825403 0 2 64,175, 0,12560, -,-, 509856 DNA hAT-Charlie 858 chr5 35823193 35823775 CR1-11_Crp 319 + 35823193 35823775 0 2 168,115, 0,467, +,+, 509861 LINE CR1 859 chr5 35991959 35992692 CR1-C4 622 - 35991959 35992692 0 2 477,256, 0,477, -,-, 509942 LINE CR1 860 chr5 36137532 36138335 CR1-Y2_Aves 429 - 36137532 36138335 0 2 102,423, 0,380, -,-, 509997 LINE CR1 863 chr5 36487077 36487994 CR1-Y2 657 + 36487077 36487994 0 2 288,629, 0,288, +,+, 510160 LINE CR1 864 chr5 36673516 36673613 (A)n 906 + 36673516 36673613 0 2 24,34, 0,63, +,+, 510272 Simple_repeat Simple_repeat 865 chr5 36820099 36820189 (ACAT)n 336 + 36820099 36820189 0 2 42,18, 0,72, +,+, 510376 Simple_repeat Simple_repeat 866 chr5 36941085 36942005 CR1-F2 370 + 36941085 36942005 0 2 765,150, 0,770, +,+, 510438 LINE CR1 868 chr5 37119905 37119957 (TA)n 306 + 37119905 37119957 0 2 6,9, 0,43, +,+, 510526 Simple_repeat Simple_repeat 868 chr5 37122235 37125222 REP131 188 - 37122235 37125222 0 2 340,151, 0,2836, -,-, 510528 DNA? DNA? 868 chr5 37122702 37124918 CR1-L3B_Croc 51 - 37122702 37124918 0 2 733,596, 0,1620, -,-, 510529 LINE CR1 869 chr5 37298733 37299019 GGLTR5B 529 + 37298733 37299019 0 2 259,27, 0,259, +,+, 510622 LTR ERVL 869 chr5 37354722 37354775 (TTTG)n 442 + 37354722 37354775 0 2 10,21, 0,32, +,+, 510647 Simple_repeat Simple_repeat 871 chr5 37508422 37508889 CR1-Y4 489 - 37508422 37508889 0 2 87,184, 0,283, -,-, 510736 LINE CR1 871 chr5 37541931 37542703 CR1-L3B_Croc 301 + 37541931 37542703 0 2 162,121, 0,651, +,+, 510755 LINE CR1 877 chr5 38291360 38291405 A-rich 414 + 38291360 38291405 0 2 15,11, 0,34, +,+, 511012 Low_complexity Low_complexity 877 chr5 38299603 38299671 (CCGC)n 348 + 38299603 38299671 0 2 22,6, 0,62, +,+, 511020 Simple_repeat Simple_repeat 878 chr5 38430069 38431384 CR1-D 722 - 38430069 38431384 0 2 567,748, 0,567, -,-, 511064 LINE CR1 878 chr5 38462918 38463452 CR1-Y3 473 - 38462918 38463452 0 2 351,173, 0,361, -,-, 511077 LINE CR1 879 chr5 38621824 38623301 CR1-F2 538 - 38621824 38623301 0 2 122,572, 0,905, -,-, 511138 LINE CR1 879 chr5 38659689 38661298 Charlie12_GG 503 - 38659689 38661298 0 2 288,367, 0,1242, -,-, 511158 DNA hAT-Charlie 879 chr5 38659976 38660927 CR1-D2 628 - 38659976 38660927 0 2 40,480, 0,471, -,-, 511159 LINE CR1 879 chr5 38660017 38660446 ENS1B-LTR 893 + 38660017 38660446 0 2 255,169, 0,260, +,+, 511160 LTR ERVL 880 chr5 38794280 38795831 CR1-L3B_Croc 341 - 38794280 38795831 0 2 103,1223, 0,328, -,-, 511210 LINE CR1 881 chr5 38850752 38851378 GGLTR8B 347 - 38850752 38851378 0 2 156,128, 0,498, -,-, 511237 LTR ERVL 881 chr5 38859858 38861244 CR1-D2 640 + 38859858 38861244 0 2 722,334, 0,1052, +,+, 511242 LINE CR1 881 chr5 38870982 38872258 CR1-L3B_Croc 297 - 38870982 38872258 0 3 121,471,143, 0,389,1133, -,-,-, 511250 LINE CR1 881 chr5 38876853 38877763 Char12Mar1_GG 687 - 38876853 38877763 0 2 138,372, 0,538, -,-, 511252 DNA hAT-Charlie 882 chr5 38942792 38943537 CR1-Y4 482 + 38942792 38943537 0 2 243,149, 0,596, +,+, 511282 LINE CR1 883 chr5 39094752 39095941 CR1-L3B_Croc 95 - 39094752 39095941 0 3 312,274,485, 0,395,704, -,-,-, 511361 LINE CR1 884 chr5 39200178 39200547 GGLTR5A 558 + 39200178 39200547 0 2 42,327, 0,42, +,+, 511408 LTR ERVL 884 chr5 39227168 39228627 CR1-C2 729 + 39227168 39228627 0 3 531,188,740, 0,531,719, +,+,+, 511420 LINE CR1 885 chr5 39373898 39375599 CR1-F 516 + 39373898 39375599 0 2 74,1627, 0,74, +,+, 511474 LINE CR1 885 chr5 39398856 39399259 CR1-Y2_Aves 219 + 39398856 39399259 0 2 87,316, 0,87, +,+, 511479 LINE CR1 886 chr5 39482244 39483149 GGLTR8B 550 + 39482244 39483149 0 2 87,50, 0,855, +,+, 511520 LTR ERVL 886 chr5 39516558 39516634 (TCT)n 462 + 39516558 39516634 0 2 9,20, 0,56, +,+, 511536 Simple_repeat Simple_repeat 886 chr5 39548963 39550582 CR1-Y1_Aves 302 + 39548963 39550582 0 2 254,873, 0,746, +,+, 511553 LINE CR1 887 chr5 39589528 39590329 (CCTTTC)n 742 + 39589528 39590329 0 2 290,258, 0,543, +,+, 511578 Simple_repeat Simple_repeat 887 chr5 39665530 39666385 CR1-X2 596 - 39665530 39666385 0 2 469,203, 0,652, -,-, 511602 LINE CR1 887 chr5 39713264 39714697 CR1-D2 607 + 39713264 39714697 0 2 550,878, 0,555, +,+, 511621 LINE CR1 888 chr5 39795901 39796721 CR1-C4 651 - 39795901 39796721 0 2 229,591, 0,229, -,-, 511651 LINE CR1 888 chr5 39801809 39802783 CR1-Y2_Aves 371 - 39801809 39802783 0 2 615,59, 0,915, -,-, 511653 LINE CR1 889 chr5 39846718 39848522 CR1-Y2_Aves 233 - 39846718 39848522 0 2 182,298, 0,1506, -,-, 511683 LINE CR1 889 chr5 39901813 39902747 CR1-D2 608 + 39901813 39902747 0 2 53,877, 0,57, +,+, 511704 LINE CR1 889 chr5 39926069 39927653 CR1-Y2_Aves 268 - 39926069 39927653 0 2 1400,104, 0,1480, -,-, 511714 LINE CR1 889 chr5 39972366 39973028 REP131 162 - 39972366 39973028 0 2 130,226, 0,436, -,-, 511742 DNA? DNA? 890 chr5 40002300 40004256 CR1-D2 549 - 40002300 40004256 0 2 825,510, 0,1446, -,-, 511762 LINE CR1 890 chr5 40093128 40094602 GGLTR5A 417 - 40093128 40094602 0 2 224,261, 0,1213, -,-, 511802 LTR ERVL 892 chr5 40250979 40252114 CR1-Y2_Aves 54 + 40250979 40252114 0 2 916,132, 0,1003, +,+, 511888 LINE CR1 892 chr5 40256335 40260447 CR1-Y2_Aves 140 - 40256335 40260447 0 2 629,109, 0,4003, -,-, 511890 LINE CR1 892 chr5 40277252 40277567 GGLTR8A 465 + 40277252 40277567 0 2 73,241, 0,74, +,+, 511903 LTR ERVL 892 chr5 40316533 40317763 Char12Mar1_GG 679 - 40316533 40317763 0 3 194,87,285, 0,747,945, -,-,-, 511922 DNA hAT-Charlie 892 chr5 40336966 40339071 Charlie7_Aves 392 - 40336966 40339071 0 2 750,1355, 0,750, -,-, 511932 DNA hAT-Charlie 892 chr5 40341788 40342216 CR1-L3A_Croc 355 + 40341788 40342216 0 2 226,66, 0,362, +,+, 511936 LINE CR1 893 chr5 40412180 40413080 CR1-C4 568 + 40412180 40413080 0 2 735,165, 0,735, +,+, 511973 LINE CR1 894 chr5 40540398 40541320 CR1-D2 494 + 40540398 40541320 0 3 125,535,243, 0,144,679, +,+,+, 512051 LINE CR1 894 chr5 40547213 40547847 Charlie12_GG 617 - 40547213 40547847 0 3 371,64,175, 0,378,459, -,-,-, 512057 DNA hAT-Charlie 895 chr5 40688099 40690241 CR1-F 283 - 40688099 40690241 0 3 260,549,365, 0,1225,1777, -,-,-, 512131 LINE CR1 896 chr5 40784059 40785012 CR1-C4 507 + 40784059 40785012 0 2 137,816, 0,137, +,+, 512187 LINE CR1 896 chr5 40812576 40812638 (TTTTTG)n 444 + 40812576 40812638 0 2 7,12, 0,50, +,+, 512213 Simple_repeat Simple_repeat 896 chr5 40879851 40880319 CR1-Y4 617 - 40879851 40880319 0 2 152,45, 0,423, -,-, 512247 LINE CR1 112 chr5 41025421 41026032 CR1-E 693 - 41025421 41026032 0 2 77,534, 0,77, -,-, 512324 LINE CR1 898 chr5 41097358 41097420 (TTTCC)n 354 + 41097358 41097420 0 2 17,7, 0,55, +,+, 512352 Simple_repeat Simple_repeat 899 chr5 41165726 41166460 CR1-F2 547 - 41165726 41166460 0 2 397,337, 0,397, -,-, 512390 LINE CR1 899 chr5 41191678 41191993 GGLTR4A 327 + 41191678 41191993 0 2 179,107, 0,208, +,+, 512405 LTR ERVL 899 chr5 41194508 41196114 CR1-Y3 612 - 41194508 41196114 0 2 938,668, 0,938, -,-, 512408 LINE CR1 899 chr5 41270151 41270544 CR1-L3B_Croc 170 + 41270151 41270544 0 2 195,160, 0,233, +,+, 512462 LINE CR1 899 chr5 41283940 41285292 CR1-Y3 616 - 41283940 41285292 0 2 724,606, 0,746, -,-, 512473 LINE CR1 900 chr5 41309726 41311102 Mariner1_GG 624 - 41309726 41311102 0 2 489,843, 0,533, -,-, 512484 DNA TcMar-Mariner 901 chr5 41478701 41479146 TguLTR5e 418 - 41478701 41479146 0 2 67,377, 0,68, -,-, 512611 LTR ERVL 901 chr5 41500720 41501057 CR1-Y1_Aves 454 + 41500720 41501057 0 2 80,224, 0,113, +,+, 512631 LINE CR1 901 chr5 41523097 41523496 GGERVL18-LTR 536 + 41523097 41523496 0 2 209,153, 0,246, +,+, 512652 LTR ERVL 901 chr5 41541070 41541760 CR1-C3 699 + 41541070 41541760 0 2 34,656, 0,34, +,+, 512662 LINE CR1 902 chr5 41577809 41578522 CR1-F 583 - 41577809 41578522 0 2 228,353, 0,360, -,-, 512687 LINE CR1 902 chr5 41578690 41579521 CR1-C4 546 + 41578690 41579521 0 2 218,280, 0,551, +,+, 512689 LINE CR1 902 chr5 41607021 41607782 Char12Mar1_GG 580 - 41607021 41607782 0 2 379,77, 0,684, -,-, 512712 DNA hAT-Charlie 902 chr5 41614360 41614494 (TTCC)n 290 + 41614360 41614494 0 2 53,8, 0,126, +,+, 512718 Simple_repeat Simple_repeat 902 chr5 41617757 41617880 A-rich 666 + 41617757 41617880 0 2 27,33, 0,90, +,+, 512722 Low_complexity Low_complexity 902 chr5 41647054 41647244 Char12Mar1_GG 633 - 41647054 41647244 0 2 91,99, 0,91, -,-, 512754 DNA hAT-Charlie 902 chr5 41675638 41676380 GGLTR12C 535 + 41675638 41676380 0 2 99,242, 0,500, +,+, 512774 LTR ERVL 903 chr5 41699474 41701138 CR1-D 625 + 41699474 41701138 0 2 207,1115, 0,549, +,+, 512798 LINE CR1 903 chr5 41811346 41811929 CR1-D 697 + 41811346 41811929 0 2 388,195, 0,388, +,+, 512878 LINE CR1 904 chr5 41853255 41865436 Char12Mar1_GG 598 - 41853255 41865436 0 2 150,210, 0,11971, -,-, 512907 DNA hAT-Charlie 905 chr5 41951845 41953207 CR1-D2 507 + 41951845 41953207 0 2 178,1184, 0,178, +,+, 512983 LINE CR1 905 chr5 42015722 42015961 GGERVL18-LTR 483 + 42015722 42015961 0 2 76,162, 0,77, +,+, 513041 LTR ERVL 905 chr5 42043991 42045491 CR1-F2 648 + 42043991 42045491 0 2 930,165, 0,1335, +,+, 513064 LINE CR1 905 chr5 42056437 42058016 CR1-Y4 507 - 42056437 42058016 0 2 31,1548, 0,31, -,-, 513079 LINE CR1 906 chr5 42078895 42079524 CR1-E 704 - 42078895 42079524 0 2 228,399, 0,230, -,-, 513096 LINE CR1 907 chr5 42226269 42226547 CR1-F2 524 - 42226269 42226547 0 2 100,178, 0,100, -,-, 513220 LINE CR1 907 chr5 42247144 42248419 CR1-Y3 714 + 42247144 42248419 0 2 764,207, 0,1068, +,+, 513235 LINE CR1 908 chr5 42414485 42415246 CR1-D2 423 - 42414485 42415246 0 2 235,526, 0,235, -,-, 513391 LINE CR1 909 chr5 42495948 42496984 CR1-D2 671 + 42495948 42496984 0 2 75,123, 0,913, +,+, 513446 LINE CR1 909 chr5 42510368 42510974 GGLTR5B 545 + 42510368 42510974 0 2 221,36, 0,570, +,+, 513466 LTR ERVL 909 chr5 42535551 42536222 CR1-D 648 + 42535551 42536222 0 2 478,83, 0,588, +,+, 513490 LINE CR1 909 chr5 42572721 42573744 Char12Mar1_GG 640 - 42572721 42573744 0 2 461,98, 0,925, -,-, 513524 DNA hAT-Charlie 910 chr5 42678050 42679238 CR1-Y2_Aves 126 - 42678050 42679238 0 2 171,800, 0,388, -,-, 513606 LINE CR1 910 chr5 42681787 42682231 TguLTR5e 391 + 42681787 42682231 0 2 273,66, 0,378, +,+, 513613 LTR ERVL 910 chr5 42722519 42722954 CR1-Y2_Aves 273 - 42722519 42722954 0 2 171,191, 0,244, -,-, 513636 LINE CR1 911 chr5 42785806 42786039 TguLTR5e 419 - 42785806 42786039 0 2 60,155, 0,78, -,-, 513677 LTR ERVL 912 chr5 42918046 42918540 CR1-Y2_Aves 236 + 42918046 42918540 0 2 305,83, 0,411, +,+, 513746 LINE CR1 913 chr5 43038918 43039219 CR1-11_Crp 237 - 43038918 43039219 0 2 136,149, 0,152, -,-, 513816 LINE CR1 913 chr5 43047097 43047987 GGLTR8B 198 + 43047097 43047987 0 2 479,269, 0,621, +,+, 513818 LTR ERVL 914 chr5 43135155 43135274 A-rich 574 + 43135155 43135274 0 2 48,32, 0,87, +,+, 513868 Low_complexity Low_complexity 914 chr5 43137324 43138364 CR1-C 861 + 43137324 43138364 0 2 214,56, 0,984, +,+, 513870 LINE CR1 916 chr5 43475893 43476825 CR1-G 778 + 43475893 43476825 0 2 493,439, 0,493, +,+, 514024 LINE CR1 918 chr5 43661123 43662351 CR1-L3B_Croc 352 + 43661123 43662351 0 2 79,556, 0,672, +,+, 514088 LINE CR1 918 chr5 43773295 43774068 CR1-F2 548 + 43773295 43774068 0 2 106,213, 0,560, +,+, 514149 LINE CR1 920 chr5 44009265 44010320 CR1-H2 372 + 44009265 44010320 0 3 230,454,253, 0,268,802, +,+,+, 514267 LINE CR1 921 chr5 44107270 44107826 CR1-Y1_Aves 422 + 44107270 44107826 0 2 263,269, 0,287, +,+, 514310 LINE CR1 921 chr5 44126526 44126605 (TTTTG)n 352 + 44126526 44126605 0 2 27,23, 0,56, +,+, 514328 Simple_repeat Simple_repeat 921 chr5 44142713 44143203 CR1-Y2_Aves 332 - 44142713 44143203 0 3 117,140,81, 0,262,409, -,-,-, 514338 LINE CR1 924 chr5 44437046 44438225 CR1-L3B_Croc 74 + 44437046 44438225 0 2 220,185, 0,994, +,+, 514461 LINE CR1 924 chr5 44492849 44493219 Char12Mar1_GG 747 - 44492849 44493219 0 2 132,238, 0,132, -,-, 514493 DNA hAT-Charlie 925 chr5 44671009 44671573 GGLTR8B 267 + 44671009 44671573 0 2 220,101, 0,463, +,+, 514570 LTR ERVL 925 chr5 44692248 44692582 Char12Mar1_GG 734 - 44692248 44692582 0 2 286,48, 0,286, -,-, 514582 DNA hAT-Charlie 928 chr5 45063432 45063791 TguLTR5e 362 + 45063432 45063791 0 2 112,106, 0,253, +,+, 514723 LTR ERVL 930 chr5 45279354 45279860 CR1-X 192 + 45279354 45279860 0 2 217,271, 0,235, +,+, 514815 LINE CR1 931 chr5 45360431 45360864 CR1-X2 742 - 45360431 45360864 0 2 29,90, 0,343, -,-, 514851 LINE CR1 931 chr5 45381514 45382036 Z-REP 0 - 45381514 45382036 0 2 17,92, 0,430, -,-, 514856 Satellite macro 932 chr5 45488048 45490228 CR1-F0 536 - 45488048 45490228 0 2 313,194, 0,1986, -,-, 514912 LINE CR1 932 chr5 45491648 45492050 CR1-D 728 - 45491648 45492050 0 2 369,33, 0,369, -,-, 514914 LINE CR1 932 chr5 45506232 45506582 GGLTR4B 606 + 45506232 45506582 0 2 232,81, 0,269, +,+, 514916 LTR ERVL 932 chr5 45511310 45511996 CR1-Y4 506 - 45511310 45511996 0 2 294,230, 0,456, -,-, 514920 LINE CR1 932 chr5 45516798 45517193 CR1-11_Crp 367 + 45516798 45517193 0 2 54,287, 0,108, +,+, 514926 LINE CR1 932 chr5 45538911 45540981 CR1-D2 371 - 45538911 45540981 0 3 105,83,661, 0,1245,1409, -,-,-, 514941 LINE CR1 933 chr5 45707302 45710041 CR1-X 235 - 45707302 45710041 0 2 2483,231, 0,2508, -,-, 515028 LINE CR1 933 chr5 45717419 45718225 CR1-C4 504 + 45717419 45718225 0 2 254,97, 0,709, +,+, 515033 LINE CR1 933 chr5 45735924 45736325 CR1-Y1_Aves 419 - 45735924 45736325 0 2 120,272, 0,129, -,-, 515042 LINE CR1 934 chr5 45753849 45754540 Mariner1_GG 577 - 45753849 45754540 0 2 350,341, 0,350, -,-, 515058 DNA TcMar-Mariner 935 chr5 45888664 45888945 CR1-13_AMi 326 - 45888664 45888945 0 2 151,85, 0,196, -,-, 515142 LINE CR1 937 chr5 46200249 46200728 Char12Mar1_GG 659 - 46200249 46200728 0 2 111,368, 0,111, -,-, 515277 DNA hAT-Charlie 937 chr5 46205351 46205449 (T)n 959 + 46205351 46205449 0 2 17,25, 0,73, +,+, 515282 Simple_repeat Simple_repeat 937 chr5 46236323 46236659 CR1-D2 605 - 46236323 46236659 0 2 278,58, 0,278, -,-, 515300 LINE CR1 937 chr5 46252223 46252527 GGLTR5B 515 - 46252223 46252527 0 2 192,78, 0,226, -,-, 515313 LTR ERVL 938 chr5 46291690 46292059 CR1-Y1_Aves 523 + 46291690 46292059 0 2 102,100, 0,269, +,+, 515338 LINE CR1 939 chr5 46428273 46429396 CR1-Y2_Aves 137 - 46428273 46429396 0 2 137,910, 0,213, -,-, 515397 LINE CR1 941 chr5 46710044 46711188 CR1-C4 328 - 46710044 46711188 0 2 95,452, 0,692, -,-, 515575 LINE CR1 941 chr5 46730040 46730089 (TTTG)n 558 + 46730040 46730089 0 2 8,11, 0,38, +,+, 515588 Simple_repeat Simple_repeat 941 chr5 46752333 46752412 (T)n 815 + 46752333 46752412 0 2 21,31, 0,48, +,+, 515598 Simple_repeat Simple_repeat 942 chr5 46826512 46827507 Mariner1_GG 586 - 46826512 46827507 0 2 497,498, 0,497, -,-, 515649 DNA TcMar-Mariner 942 chr5 46842280 46842398 (T)n 853 + 46842280 46842398 0 2 30,30, 0,88, +,+, 515656 Simple_repeat Simple_repeat 943 chr5 46958986 46963045 CR1-E 437 + 46958986 46963045 0 2 49,121, 0,3938, +,+, 515730 LINE CR1 943 chr5 47004739 47010917 GGERVK1-int 983 + 47004739 47010917 0 4 241,5257,439,241, 0,241,5498,5937, +,+,+,+, 515754 LTR ERVK 943 chr5 47013793 47016456 CR1-C4 577 + 47013793 47016456 0 3 375,49,292, 0,2322,2371, +,+,+, 515758 LINE CR1 943 chr5 47017885 47019023 CR1-E 666 - 47017885 47019023 0 2 191,947, 0,191, -,-, 515761 LINE CR1 943 chr5 47031065 47031365 Eulor4 162 + 47031065 47031365 0 2 175,82, 0,218, +,+, 515773 Unknown Unknown 944 chr5 47093101 47093953 CR1-X2 112 + 47093101 47093953 0 2 264,572, 0,280, +,+, 515822 LINE CR1 944 chr5 47101452 47102700 Char12Mar1_GG 552 - 47101452 47102700 0 2 841,407, 0,841, -,-, 515825 DNA hAT-Charlie 946 chr5 47414446 47414760 UCON66 377 + 47414446 47414760 0 2 182,75, 0,239, +,+, 516090 Unknown Unknown 946 chr5 47416677 47416753 A-rich 464 + 47416677 47416753 0 2 16,20, 0,56, +,+, 516091 Low_complexity Low_complexity 946 chr5 47429662 47430265 CR1-D2 719 - 47429662 47430265 0 2 241,362, 0,241, -,-, 516100 LINE CR1 947 chr5 47462058 47466260 MER130 269 - 47462058 47466260 0 3 117,63,468, 0,2657,3734, -,-,-, 516117 DNA DNA 947 chr5 47489642 47491066 CR1-Y3 528 - 47489642 47491066 0 2 1009,415, 0,1009, -,-, 516141 LINE CR1 947 chr5 47498976 47499094 (A)n 1000 + 47498976 47499094 0 2 30,26, 0,92, +,+, 516147 Simple_repeat Simple_repeat 947 chr5 47537675 47537842 AmnSINE1 490 - 47537675 47537842 0 2 64,74, 0,93, -,-, 516175 SINE 5S-Deu-L2 947 chr5 47547657 47548106 L2-1_AMi 249 - 47547657 47548106 0 2 69,185, 0,264, -,-, 516187 LINE L2 948 chr5 47608256 47609559 CR1-B2 563 + 47608256 47609559 0 3 290,282,294, 0,727,1009, +,+,+, 516244 LINE CR1 948 chr5 47675625 47676291 CR1-X2 547 + 47675625 47676291 0 2 164,502, 0,164, +,+, 516293 LINE CR1 949 chr5 47742444 47742792 GGLTR5A 559 + 47742444 47742792 0 2 234,114, 0,234, +,+, 516333 LTR ERVL 950 chr5 47886842 47887201 Char12Mar1_GG 733 - 47886842 47887201 0 2 284,75, 0,284, -,-, 516439 DNA hAT-Charlie 951 chr5 48052553 48054437 CR1-C2 409 - 48052553 48054437 0 3 218,264,491, 0,225,1393, -,-,-, 516545 LINE CR1 951 chr5 48077776 48078595 CR1-Y2_Aves 222 + 48077776 48078595 0 3 87,169,305, 0,345,514, +,+,+, 516559 LINE CR1 953 chr5 48245465 48246031 CR1-C4 621 + 48245465 48246031 0 2 335,231, 0,335, +,+, 516637 LINE CR1 953 chr5 48335785 48335931 (GCC)n 406 + 48335785 48335931 0 2 47,55, 0,91, +,+, 516681 Simple_repeat Simple_repeat 955 chr5 48521739 48522009 CR1-B2 284 - 48521739 48522009 0 2 150,110, 0,160, -,-, 516751 LINE CR1 956 chr5 48755324 48755866 CR1-X1 629 - 48755324 48755866 0 2 231,300, 0,242, -,-, 516860 LINE CR1 957 chr5 48820905 48821159 CR1-D2 639 + 48820905 48821159 0 2 49,194, 0,60, +,+, 516890 LINE CR1 959 chr5 49061319 49062197 CR1-D2 636 + 49061319 49062197 0 2 428,450, 0,428, +,+, 517041 LINE CR1 959 chr5 49074043 49074322 CR1-D2 355 - 49074043 49074322 0 2 153,126, 0,153, -,-, 517049 LINE CR1 959 chr5 49086828 49088423 GGLTR8B 536 + 49086828 49088423 0 2 526,492, 0,1103, +,+, 517057 LTR ERVL 960 chr5 49187592 49187900 CR1-F2 422 + 49187592 49187900 0 2 93,215, 0,93, +,+, 517121 LINE CR1 960 chr5 49233239 49234723 CR1-Y2_Aves 374 + 49233239 49234723 0 3 915,68,204, 0,1193,1280, +,+,+, 517146 LINE CR1 961 chr5 49299099 49299295 CR1-X 573 - 49299099 49299295 0 2 76,100, 0,96, -,-, 517196 LINE CR1 961 chr5 49334439 49334926 CR1-B2 761 - 49334439 49334926 0 2 315,172, 0,315, -,-, 517225 LINE CR1 961 chr5 49385593 49386425 Char12Mar1_GG 641 - 49385593 49386425 0 2 472,80, 0,752, -,-, 517258 DNA hAT-Charlie 962 chr5 49422028 49423028 GGERV20_I-int 235 - 49422028 49423028 0 2 491,80, 0,920, -,-, 517278 LTR ERVL 964 chr5 49783633 49784134 CR1-C4 592 - 49783633 49784134 0 2 155,295, 0,206, -,-, 517417 LINE CR1 965 chr5 49857001 49857931 CR1-F2 450 - 49857001 49857931 0 2 46,109, 0,821, -,-, 517440 LINE CR1 965 chr5 49911680 49912186 CR1-C4 516 - 49911680 49912186 0 2 200,306, 0,200, -,-, 517488 LINE CR1 965 chr5 49930509 49930905 CR1-H2 496 + 49930509 49930905 0 2 206,74, 0,322, +,+, 517501 LINE CR1 966 chr5 50018704 50019383 CR1-F2 845 - 50018704 50019383 0 2 459,214, 0,465, -,-, 517547 LINE CR1 966 chr5 50057321 50057573 Char12Mar1_GG 419 - 50057321 50057573 0 2 89,149, 0,103, -,-, 517559 DNA hAT-Charlie 966 chr5 50065896 50066199 CR1-Y2_Aves 267 - 50065896 50066199 0 2 120,176, 0,127, -,-, 517562 LINE CR1 968 chr5 50278997 50280163 CR1-L3A_Croc 311 - 50278997 50280163 0 2 73,618, 0,548, -,-, 517679 LINE CR1 968 chr5 50319474 50320442 CR1-L3A_Croc 212 + 50319474 50320442 0 2 333,346, 0,622, +,+, 517703 LINE CR1 972 chr5 50827579 50828249 CR1-X2 456 - 50827579 50828249 0 2 215,455, 0,215, -,-, 517914 LINE CR1 973 chr5 50883500 50883585 (T)n 1000 + 50883500 50883585 0 2 22,17, 0,68, +,+, 517933 Simple_repeat Simple_repeat 974 chr5 50987399 50987693 Mariner1b_GG 594 - 50987399 50987693 0 2 200,94, 0,200, -,-, 517973 DNA TcMar-Mariner 974 chr5 51037835 51038330 GGLTR5A 518 + 51037835 51038330 0 2 272,133, 0,362, +,+, 518003 LTR ERVL 975 chr5 51170875 51171317 CR1-C4 573 + 51170875 51171317 0 2 341,101, 0,341, +,+, 518084 LINE CR1 976 chr5 51259739 51260868 CR1-L3A_Croc 215 + 51259739 51260868 0 3 171,176,396, 0,425,733, +,+,+, 518125 LINE CR1 976 chr5 51326658 51327125 CR1-F0 524 + 51326658 51327125 0 2 404,60, 0,407, +,+, 518162 LINE CR1 977 chr5 51470331 51470573 CR1-C3 541 - 51470331 51470573 0 2 197,42, 0,200, -,-, 518243 LINE CR1 977 chr5 51494160 51494517 CR1-D2 658 + 51494160 51494517 0 2 248,109, 0,248, +,+, 518257 LINE CR1 979 chr5 51756664 51757475 CR1-D2 586 - 51756664 51757475 0 2 351,460, 0,351, -,-, 518398 LINE CR1 980 chr5 51788754 51789170 CR1-F0 445 + 51788754 51789170 0 2 15,86, 0,330, +,+, 518430 LINE CR1 980 chr5 51802609 51803255 CR1-L3B_Croc 203 - 51802609 51803255 0 2 239,393, 0,253, -,-, 518442 LINE CR1 982 chr5 52041203 52041398 CR1-D2 587 - 52041203 52041398 0 2 133,62, 0,133, -,-, 518543 LINE CR1 982 chr5 52055799 52056140 CR1-F2 573 + 52055799 52056140 0 2 114,108, 0,233, +,+, 518553 LINE CR1 982 chr5 52075484 52076216 CR1-L3B_Croc 170 - 52075484 52076216 0 2 412,139, 0,593, -,-, 518567 LINE CR1 984 chr5 52339675 52339755 (GGCAGA)n 376 + 52339675 52339755 0 2 13,45, 0,35, +,+, 518687 Simple_repeat Simple_repeat 984 chr5 52377232 52378285 CR1-C4 551 + 52377232 52378285 0 2 281,772, 0,281, +,+, 518716 LINE CR1 984 chr5 52422471 52422797 GGERV21_LTR 536 + 52422471 52422797 0 2 218,74, 0,252, +,+, 518732 LTR ERVL 985 chr5 52455179 52455252 (TTTTGGT)n 464 + 52455179 52455252 0 2 15,10, 0,63, +,+, 518751 Simple_repeat Simple_repeat 985 chr5 52459075 52460078 CR1-L3B_Croc 391 - 52459075 52460078 0 3 123,60,204, 0,466,799, -,-,-, 518756 LINE CR1 985 chr5 52478347 52478663 CR1-C4 683 - 52478347 52478663 0 2 174,94, 0,222, -,-, 518768 LINE CR1 985 chr5 52530408 52530676 CR1-X1 679 - 52530408 52530676 0 2 227,41, 0,227, -,-, 518808 LINE CR1 986 chr5 52643638 52644975 CR1-Y2_Aves 235 + 52643638 52644975 0 2 1037,298, 0,1039, +,+, 518877 LINE CR1 987 chr5 52803290 52803770 CR1-Y4 466 - 52803290 52803770 0 2 387,93, 0,387, -,-, 518972 LINE CR1 988 chr5 52923259 52924140 CR1-Y2_Aves 185 - 52923259 52924140 0 3 201,281,381, 0,208,500, -,-,-, 519034 LINE CR1 988 chr5 52937174 52941135 CR1-11_Crp 363 - 52937174 52941135 0 2 111,67, 0,3894, -,-, 519041 LINE CR1 990 chr5 53127851 53129796 CR1-F2 286 - 53127851 53129796 0 2 220,124, 0,1821, -,-, 519130 LINE CR1 990 chr5 53204093 53205003 CR1-X2 161 - 53204093 53205003 0 2 510,385, 0,525, -,-, 519155 LINE CR1 990 chr5 53208850 53209130 GGLTR5B 709 - 53208850 53209130 0 2 79,201, 0,79, -,-, 519157 LTR ERVL 991 chr5 53300328 53300406 G-rich 292 + 53300328 53300406 0 2 20,15, 0,63, +,+, 519199 Low_complexity Low_complexity 992 chr5 53449835 53451333 CR1-Y4 509 + 53449835 53451333 0 2 630,868, 0,630, +,+, 519260 LINE CR1 993 chr5 53593744 53594234 CR1-C4 444 - 53593744 53594234 0 2 189,301, 0,189, -,-, 519358 LINE CR1 994 chr5 53638853 53639597 CR1-C 838 - 53638853 53639597 0 2 479,265, 0,479, -,-, 519384 LINE CR1 994 chr5 53685898 53690554 ENS1-LTR 971 - 53685898 53690554 0 3 915,2826,915, 0,915,3741, -,-,-, 519399 LTR ERVL 995 chr5 53751414 53751716 CR1-C2 654 + 53751414 53751716 0 2 81,221, 0,81, +,+, 519438 LINE CR1 995 chr5 53787334 53787590 Charlie12_GGa 606 - 53787334 53787590 0 3 38,163,55, 0,38,201, -,-,-, 519460 DNA hAT-Charlie 995 chr5 53852472 53856153 CR1-H 631 - 53852472 53856153 0 6 684,258,596,252,71,558, 0,1342,1601,2798,3052,3123, -,-,-,-,-,-, 519498 LINE CR1 995 chr5 53859712 53860543 CR1-G 845 - 53859712 53860543 0 2 337,488, 0,343, -,-, 519503 LINE CR1 996 chr5 53872689 53878283 GGERV30_LTR 755 - 53872689 53878283 0 2 305,5289, 0,305, -,-, 519510 LTR ERVL 996 chr5 53894062 53894527 CR1-H 768 + 53894062 53894527 0 2 224,167, 0,298, +,+, 519522 LINE CR1 996 chr5 53960533 53961063 GGLTR3F1 938 - 53960533 53961063 0 2 494,36, 0,494, -,-, 519565 LTR ERVL 996 chr5 53961063 53966871 GGLTR3F1 897 - 53961063 53966871 0 2 5313,494, 0,5314, -,-, 519566 LTR ERVL 996 chr5 53986243 53986956 CR1-G 759 - 53986243 53986956 0 3 304,358,45, 0,310,668, -,-,-, 519579 LINE CR1 996 chr5 53991464 53992503 CR1-G 815 - 53991464 53992503 0 2 337,696, 0,343, -,-, 519584 LINE CR1 998 chr5 54177188 54177689 CR1-11_Crp 185 - 54177188 54177689 0 2 407,79, 0,422, -,-, 519661 LINE CR1 998 chr5 54244550 54245549 CR1-F2 570 - 54244550 54245549 0 2 185,119, 0,880, -,-, 519695 LINE CR1 999 chr5 54295253 54295646 CR1-X 596 + 54295253 54295646 0 2 134,54, 0,339, +,+, 519724 LINE CR1 1000 chr5 54411964 54413322 CR1-L3B_Croc 285 - 54411964 54413322 0 4 96,94,130,141, 0,552,853,1217, -,-,-,-, 519769 LINE CR1 1001 chr5 54644368 54646167 CR1-H 813 + 54644368 54646167 0 2 761,1038, 0,761, +,+, 519925 LINE CR1 1001 chr5 54653831 54654954 CR1-Y2_Aves 140 - 54653831 54654954 0 2 694,292, 0,831, -,-, 519933 LINE CR1 1003 chr5 54811638 54814458 CR1-D2 606 + 54811638 54814458 0 2 185,130, 0,2690, +,+, 520005 LINE CR1 1003 chr5 54864248 54864988 CR1-11_Crp 197 + 54864248 54864988 0 2 161,176, 0,564, +,+, 520034 LINE CR1 1004 chr5 55008761 55014631 CR1-G 734 - 55008761 55014631 0 2 454,2297, 0,3573, -,-, 520132 LINE CR1 1004 chr5 55009212 55012080 CR1-C 786 - 55009212 55012080 0 2 2446,422, 0,2446, -,-, 520133 LINE CR1 1004 chr5 55023426 55029327 CR1-G 731 - 55023426 55029327 0 2 454,2305, 0,3596, -,-, 520141 LINE CR1 1004 chr5 55023877 55026761 CR1-C 829 - 55023877 55026761 0 2 2454,430, 0,2454, -,-, 520142 LINE CR1 1004 chr5 55037278 55039856 CR1-C 833 - 55037278 55039856 0 2 2449,129, 0,2449, -,-, 520149 LINE CR1 125 chr5 55046908 55052801 CR1-G 728 - 55046908 55052801 0 2 454,2303, 0,3590, -,-, 520153 LINE CR1 1004 chr5 55047359 55050237 CR1-C 849 - 55047359 55050237 0 2 2448,430, 0,2448, -,-, 520154 LINE CR1 1005 chr5 55056295 55057588 CR1-C 809 - 55056295 55057588 0 2 1165,128, 0,1165, -,-, 520158 LINE CR1 1005 chr5 55064581 55070473 CR1-G 736 - 55064581 55070473 0 2 453,2303, 0,3589, -,-, 520164 LINE CR1 1005 chr5 55065031 55067909 CR1-C 853 - 55065031 55067909 0 2 2449,429, 0,2449, -,-, 520165 LINE CR1 1005 chr5 55073849 55075871 CR1-F2 444 + 55073849 55075871 0 2 860,328, 0,1694, +,+, 520170 LINE CR1 1005 chr5 55173328 55173593 CR1-Y4 478 + 55173328 55173593 0 2 25,146, 0,119, +,+, 520238 LINE CR1 1006 chr5 55182030 55184243 CR1-F2 495 - 55182030 55184243 0 2 217,90, 0,2123, -,-, 520245 LINE CR1 1006 chr5 55247073 55249595 CR1-F2 447 - 55247073 55249595 0 2 262,83, 0,2439, -,-, 520293 LINE CR1 1007 chr5 55320285 55320940 CR1-L3B_Croc 222 + 55320285 55320940 0 2 259,112, 0,543, +,+, 520328 LINE CR1 1007 chr5 55337599 55337957 CR1-X1 455 + 55337599 55337957 0 2 62,194, 0,164, +,+, 520340 LINE CR1 1007 chr5 55351929 55351987 (TTTC)n 548 + 55351929 55351987 0 2 8,20, 0,38, +,+, 520345 Simple_repeat Simple_repeat 1007 chr5 55442318 55442699 CR1-D2 665 + 55442318 55442699 0 2 238,143, 0,238, +,+, 520392 LINE CR1 1008 chr5 55457376 55460654 CR1-F2 569 + 55457376 55460654 0 2 89,130, 0,3148, +,+, 520401 LINE CR1 1008 chr5 55470221 55471180 CR1-F2 608 - 55470221 55471180 0 2 394,565, 0,394, -,-, 520408 LINE CR1 1009 chr5 55633699 55634210 CR1-C4 521 + 55633699 55634210 0 2 149,267, 0,244, +,+, 520512 LINE CR1 1010 chr5 55754398 55755611 CR1-F2 320 + 55754398 55755611 0 2 146,138, 0,1075, +,+, 520606 LINE CR1 1010 chr5 55772514 55772924 CR1-F2 264 + 55772514 55772924 0 2 101,130, 0,280, +,+, 520618 LINE CR1 1011 chr5 55920444 55920652 G-rich 579 + 55920444 55920652 0 3 46,37,48, 0,84,160, +,+,+, 520733 Low_complexity Low_complexity 1011 chr5 55937671 55938091 CR1-C4 571 + 55937671 55938091 0 2 53,99, 0,321, +,+, 520762 LINE CR1 1012 chr5 55979452 55980647 CR1-11_Crp 269 - 55979452 55980647 0 2 339,140, 0,1055, -,-, 520799 LINE CR1 1013 chr5 56120218 56123472 CR1-F2 435 + 56120218 56123472 0 2 76,505, 0,2749, +,+, 520923 LINE CR1 1013 chr5 56157500 56157943 CR1-C4 613 + 56157500 56157943 0 2 293,150, 0,293, +,+, 520950 LINE CR1 1013 chr5 56186078 56186421 CR1-D2 553 + 56186078 56186421 0 2 242,101, 0,242, +,+, 520977 LINE CR1 1013 chr5 56187523 56191211 CR1-F2 466 - 56187523 56191211 0 2 288,80, 0,3608, -,-, 520978 LINE CR1 1013 chr5 56191717 56192090 CR1-D2 627 + 56191717 56192090 0 2 100,241, 0,132, +,+, 520983 LINE CR1 1013 chr5 56201201 56202952 CR1-F2 289 - 56201201 56202952 0 2 178,148, 0,1603, -,-, 520991 LINE CR1 1013 chr5 56208742 56211356 CR1-C2 280 + 56208742 56211356 0 2 89,68, 0,2546, +,+, 520997 LINE CR1 1013 chr5 56220658 56221223 CR1-H2 461 - 56220658 56221223 0 2 65,97, 0,468, -,-, 521013 LINE CR1 1014 chr5 56275143 56275432 CR1-C2 723 + 56275143 56275432 0 2 89,200, 0,89, +,+, 521037 LINE CR1 1014 chr5 56280906 56282849 CR1-C4 549 - 56280906 56282849 0 3 159,239,53, 0,1620,1890, -,-,-, 521042 LINE CR1 1014 chr5 56294828 56298118 CR1-D2 489 + 56294828 56298118 0 2 88,402, 0,2888, +,+, 521050 LINE CR1 1014 chr5 56294842 56296629 CR1-C4 363 + 56294842 56296629 0 2 112,167, 0,1620, +,+, 521051 LINE CR1 1014 chr5 56325263 56325726 CR1-L3B_Croc 261 + 56325263 56325726 0 2 90,311, 0,152, +,+, 521066 LINE CR1 1014 chr5 56339383 56340016 Char12Mar1_GG 540 - 56339383 56340016 0 2 227,283, 0,350, -,-, 521079 DNA hAT-Charlie 1014 chr5 56342843 56342931 (ATACAC)n 262 + 56342843 56342931 0 2 56,11, 0,77, +,+, 521081 Simple_repeat Simple_repeat 1015 chr5 56400432 56402218 CR1-F2 303 - 56400432 56402218 0 2 56,298, 0,1488, -,-, 521115 LINE CR1 1016 chr5 56493972 56494713 CR1-Y2_Aves 280 + 56493972 56494713 0 3 117,75,256, 0,360,485, +,+,+, 521179 LINE CR1 1016 chr5 56494191 56494339 CR1-F2 144 - 56494191 56494339 0 2 58,58, 0,90, -,-, 521181 LINE CR1 1016 chr5 56538336 56538454 CR1-D2 633 - 56538336 56538454 0 2 45,73, 0,45, -,-, 521228 LINE CR1 1016 chr5 56540791 56541848 CR1-D2 486 + 56540791 56541848 0 2 11,158, 0,899, +,+, 521233 LINE CR1 1016 chr5 56552194 56554604 CR1-F2 285 + 56552194 56554604 0 2 102,125, 0,2285, +,+, 521249 LINE CR1 1016 chr5 56558170 56559935 CR1-F2 426 + 56558170 56559935 0 2 197,95, 0,1670, +,+, 521256 LINE CR1 1016 chr5 56576082 56576139 (TCTGTT)n 470 + 56576082 56576139 0 2 16,7, 0,50, +,+, 521271 Simple_repeat Simple_repeat 1017 chr5 56671356 56672314 CR1-F2 402 + 56671356 56672314 0 2 352,64, 0,894, +,+, 521328 LINE CR1 1017 chr5 56671668 56671847 CR1-C3 573 + 56671668 56671847 0 2 76,93, 0,86, +,+, 521329 LINE CR1 1017 chr5 56708920 56716282 Char12Mar1_GG 472 - 56708920 56716282 0 2 446,298, 0,7064, -,-, 521362 DNA hAT-Charlie 1017 chr5 56719059 56719611 CR1-C3 689 + 56719059 56719611 0 2 40,512, 0,40, +,+, 521367 LINE CR1 1017 chr5 56724716 56724837 CR1-H2 605 + 56724716 56724837 0 2 43,59, 0,62, +,+, 521370 LINE CR1 1018 chr5 56830086 56832204 ENS3-int 385 - 56830086 56832204 0 3 496,293,365, 0,497,1753, -,-,-, 521453 LTR ERVL 1018 chr5 56862064 56862538 CR1-Y2_Aves 343 - 56862064 56862538 0 2 234,183, 0,291, -,-, 521487 LINE CR1 1019 chr5 56926664 56926961 CR1-F0 378 + 56926664 56926961 0 2 54,27, 0,270, +,+, 521541 LINE CR1 1019 chr5 56957802 56959648 CR1-F2 475 - 56957802 56959648 0 2 728,91, 0,1755, -,-, 521572 LINE CR1 1019 chr5 56996644 56997252 CR1-X1 457 + 56996644 56997252 0 2 288,259, 0,349, +,+, 521597 LINE CR1 1020 chr5 57122024 57125501 CR1-C2 849 - 57122024 57125501 0 3 286,408,239, 0,2560,3238, -,-,-, 521699 LINE CR1 1021 chr5 57192393 57193190 CR1-C 694 + 57192393 57193190 0 2 91,159, 0,638, +,+, 521752 LINE CR1 1021 chr5 57199916 57200432 CR1-D 557 + 57199916 57200432 0 2 406,110, 0,406, +,+, 521758 LINE CR1 1021 chr5 57232735 57232824 (GCCGCC)n 298 + 57232735 57232824 0 2 14,30, 0,59, +,+, 521784 Simple_repeat Simple_repeat 1021 chr5 57268752 57271957 CR1-F2 505 - 57268752 57271957 0 2 439,103, 0,3102, -,-, 521813 LINE CR1 1022 chr5 57326509 57326890 CR1-L3A_Croc 225 - 57326509 57326890 0 2 193,85, 0,296, -,-, 521864 LINE CR1 127 chr5 57407449 57412220 CR1-F2 459 - 57407449 57412220 0 2 87,225, 0,4546, -,-, 521937 LINE CR1 1023 chr5 57513239 57513335 CR1-D2 731 + 57513239 57513335 0 2 54,42, 0,54, +,+, 522010 LINE CR1 1024 chr5 57662369 57662560 CR1-D2 541 - 57662369 57662560 0 2 73,118, 0,73, -,-, 522106 LINE CR1 1025 chr5 57715467 57716111 CR1-X1 608 - 57715467 57716111 0 2 302,148, 0,496, -,-, 522141 LINE CR1 1026 chr5 57895837 57897359 CR1-C4 527 + 57895837 57897359 0 2 332,823, 0,699, +,+, 522239 LINE CR1 1026 chr5 57910746 57911515 CR1-X1 498 - 57910746 57911515 0 2 233,536, 0,233, -,-, 522250 LINE CR1 1027 chr5 58038507 58039976 CR1-D2 406 + 58038507 58039976 0 2 97,84, 0,1385, +,+, 522350 LINE CR1 1028 chr5 58082193 58084195 CR1-F2 498 - 58082193 58084195 0 2 80,136, 0,1866, -,-, 522384 LINE CR1 1028 chr5 58083838 58083900 (GGAGCA)n 374 + 58083838 58083900 0 2 11,7, 0,55, +,+, 522390 Simple_repeat Simple_repeat 1028 chr5 58183405 58183782 CR1-Y4 614 - 58183405 58183782 0 2 180,137, 0,240, -,-, 522475 LINE CR1 1029 chr5 58225321 58225553 CR1-E 510 - 58225321 58225553 0 2 105,127, 0,105, -,-, 522513 LINE CR1 1029 chr5 58289151 58289712 CR1-Y1_Aves 506 + 58289151 58289712 0 2 515,46, 0,515, +,+, 522550 LINE CR1 1029 chr5 58296072 58297692 CR1-F2 652 + 58296072 58297692 0 2 785,835, 0,785, +,+, 522553 LINE CR1 1030 chr5 58402372 58402548 CR1-C4 576 - 58402372 58402548 0 2 136,40, 0,136, -,-, 522630 LINE CR1 1030 chr5 58414618 58415894 CR1-F2 453 - 58414618 58415894 0 3 82,146,145, 0,979,1131, -,-,-, 522641 LINE CR1 1030 chr5 58427284 58428080 CR1-C 704 + 58427284 58428080 0 2 146,170, 0,626, +,+, 522663 LINE CR1 1030 chr5 58442243 58444577 CR1-F2 384 - 58442243 58444577 0 2 118,274, 0,2060, -,-, 522680 LINE CR1 1031 chr5 58532400 58533228 CR1-F2 475 - 58532400 58533228 0 2 87,157, 0,671, -,-, 522743 LINE CR1 1033 chr5 58759737 58759774 (ACAA)n 526 + 58759737 58759774 0 2 6,7, 0,30, +,+, 522913 Simple_repeat Simple_repeat 1033 chr5 58834904 58835760 CR1-Y3 670 + 58834904 58835760 0 2 274,227, 0,629, +,+, 522967 LINE CR1 1034 chr5 58853406 58853942 TguLTR5e 306 + 58853406 58853942 0 2 143,376, 0,160, +,+, 522982 LTR ERVL 1034 chr5 58932686 58933379 GGLTR8A 146 + 58932686 58933379 0 2 225,400, 0,293, +,+, 523037 LTR ERVL 1035 chr5 59019425 59020590 CR1-C3 534 + 59019425 59020590 0 2 894,271, 0,894, +,+, 523091 LINE CR1 1035 chr5 59027356 59027496 CR1-C2 806 - 59027356 59027496 0 2 90,50, 0,90, -,-, 523098 LINE CR1 1035 chr5 59027446 59029461 CR1-Y3 500 - 59027446 59029461 0 2 12,152, 0,1863, -,-, 523099 LINE CR1 1035 chr5 59029461 59029715 CR1-C 800 + 59029461 59029715 0 2 141,110, 0,144, +,+, 523100 LINE CR1 1035 chr5 59044144 59044547 CR1-G 851 + 59044144 59044547 0 2 60,337, 0,66, +,+, 523114 LINE CR1 1035 chr5 59048413 59048816 CR1-G 854 + 59048413 59048816 0 2 60,337, 0,66, +,+, 523119 LINE CR1 1035 chr5 59052682 59053085 CR1-G 851 + 59052682 59053085 0 2 60,337, 0,66, +,+, 523124 LINE CR1 1035 chr5 59056952 59057355 CR1-G 851 + 59056952 59057355 0 2 60,337, 0,66, +,+, 523129 LINE CR1 1035 chr5 59098849 59099238 CR1-Y4 535 + 59098849 59099238 0 2 241,148, 0,241, +,+, 523157 LINE CR1 1035 chr5 59107551 59109066 CR1-F0 629 + 59107551 59109066 0 2 67,83, 0,1432, +,+, 523169 LINE CR1 129 chr5 59113292 59113579 CR1-Y1_Aves 441 - 59113292 59113579 0 2 134,81, 0,206, -,-, 523174 LINE CR1 1036 chr5 59204749 59205691 CR1-C4 254 + 59204749 59205691 0 2 170,142, 0,800, +,+, 523231 LINE CR1 1036 chr5 59235529 59236124 CR1-X2 660 - 59235529 59236124 0 2 50,218, 0,377, -,-, 523258 LINE CR1 1037 chr5 59264747 59265089 CR1-F2 376 + 59264747 59265089 0 2 14,269, 0,73, +,+, 523279 LINE CR1 1037 chr5 59270661 59270878 CR1-X2 184 + 59270661 59270878 0 2 143,27, 0,190, +,+, 523285 LINE CR1 1037 chr5 59337842 59338343 GGLTR8B 477 - 59337842 59338343 0 2 463,38, 0,463, -,-, 523326 LTR ERVL 1037 chr5 59353648 59354893 CR1-C4 463 + 59353648 59354893 0 2 464,256, 0,989, +,+, 523345 LINE CR1 1038 chr5 59405081 59405287 CR1-F 295 - 59405081 59405287 0 2 23,183, 0,23, -,-, 523382 LINE CR1 1038 chr5 59467782 59468128 CR1-X2 649 - 59467782 59468128 0 2 24,280, 0,66, -,-, 523427 LINE CR1 1040 chr5 59669533 59670015 CR1-D2 627 - 59669533 59670015 0 2 243,229, 0,253, -,-, 523540 LINE CR1 1041 chr5 59772414 59772923 GGLTR11-int 169 - 59772414 59772923 0 2 369,140, 0,369, -,-, 523605 LTR ERV1 1041 chr5 59814239 59816177 CR1-C 590 - 59814239 59816177 0 2 824,417, 0,1521, -,-, 523628 LINE CR1 1041 chr5 59816551 59816684 (TGTT)n 633 + 59816551 59816684 0 2 45,27, 0,106, +,+, 523630 Simple_repeat Simple_repeat 1041 chr5 59819160 59820241 CR1-Y4 258 + 59819160 59820241 0 2 169,333, 0,748, +,+, 523634 LINE CR1 1041 chr5 59820252 59821976 CR1-G 529 - 59820252 59821976 0 3 386,159,600, 0,703,1124, -,-,-, 523636 LINE CR1 585 chr5_NT_460417v1_random 242 3920 GGERV10_LTR 863 + 242 3920 0 2 3458,220, 0,3458, +,+, 523640 LTR ERVL 585 chr5_NT_460417v1_random 13426 13797 GGLTR4A 516 - 13426 13797 0 2 95,239, 0,132, -,-, 523654 LTR ERVL 585 chr5_NT_460417v1_random 16929 23863 GGERV28_I-int 339 - 16929 23863 0 2 51,506, 0,6428, -,-, 523657 LTR ERVK 585 chr5_NT_460417v1_random 17107 23312 GGLTR3F2 776 + 17107 23312 0 5 232,208,5317,292,94, 0,292,502,5819,6111, +,+,+,+,+, 523658 LTR ERVL 585 chr5_NT_460417v1_random 26244 29915 GGLTR3B1 755 + 26244 29915 0 2 504,3167, 0,504, +,+, 523660 LTR ERVL 585 chr5_NT_460417v1_random 29915 37120 GGLTR7-int 672 - 29915 37120 0 8 30,1949,758,93,529,55,493,601, 0,132,2085,3373,4040,5502,6111,6604, -,-,-,-,-,-,-,-, 523661 LTR ERV1 585 chr5_NT_460417v1_random 39279 43829 GGERVK10-int 676 - 39279 43829 0 4 379,3062,722,379, 0,379,3441,4171, -,-,-,-, 523669 LTR ERVK 585 chr5_NT_460417v1_random 45958 47911 GGERVL-B-int 786 - 45958 47911 0 2 1469,482, 0,1471, -,-, 523673 LTR ERVL 585 chr5_NT_460417v1_random 48137 56248 GGLTR7-int 186 - 48137 56248 0 2 436,160, 0,7951, -,-, 523674 LTR ERV1 585 chr5_NT_460417v1_random 51647 53957 GGERV10_LTR 819 + 51647 53957 0 3 82,158,1980, 0,171,330, +,+,+, 523678 LTR ERVL 585 chr5_NT_460417v1_random 54015 56088 GGERV10_LTR 861 + 54015 56088 0 4 180,1566,80,158, 0,180,1746,1915, +,+,+,+, 523680 LTR ERVL 585 chr5_NT_460417v1_random 58050 60147 GGERVL-A-int 577 - 58050 60147 0 2 1270,825, 0,1272, -,-, 523683 LTR ERVL 585 chr5_NT_460419v1_random 5159 5322 CR1-F2 476 . 5159 5322 0 2 66,77, 0,86, -,+, 523699 LINE CR1 585 chr5_NT_460420v1_random 9749 15579 GGLTR3F1 845 + 9749 15579 0 2 495,5333, 0,497, +,+, 523729 LTR ERVL 585 chr5_NT_460420v1_random 18376 23759 GGLTR7-int 777 + 18376 23759 0 3 117,4655,611, 0,117,4772, +,+,+, 523736 LTR ERV1 585 chr5_NT_460420v1_random 24238 25563 (GAGTG)n 413 + 24238 25563 0 4 181,260,572,179, 0,221,537,1146, +,+,+,+, 523738 Simple_repeat Simple_repeat 585 chr5_NT_460420v1_random 25680 26154 (GAGTG)n 256 + 25680 26154 0 2 262,192, 0,282, +,+, 523740 Simple_repeat Simple_repeat 585 chr5_NT_460420v1_random 28089 28533 (GAGTG)n 455 + 28089 28533 0 2 145,284, 0,160, +,+, 523749 Simple_repeat Simple_repeat 585 chr5_NT_460420v1_random 28666 29617 (GAGTG)n 371 + 28666 29617 0 3 359,193,339, 0,376,612, +,+,+, 523751 Simple_repeat Simple_repeat 585 chr5_NT_460420v1_random 29655 30155 (GAGTG)n 309 + 29655 30155 0 2 179,298, 0,202, +,+, 523753 Simple_repeat Simple_repeat 585 chr5_NT_460421v1_random 18910 19012 (CCCATC)n 573 + 18910 19012 0 2 37,41, 0,61, +,+, 523772 Simple_repeat Simple_repeat 585 chr5_NT_460423v1_random 153 1267 CR1-Y 331 - 153 1267 0 2 348,746, 0,368, -,-, 523812 LINE CR1 585 chr5_NT_460424v1_random 20034 24183 ENS1-LTR 904 - 20034 24183 0 3 930,2812,407, 0,930,3742, -,-,-, 523850 LTR ERVL 585 chr5_NT_460425v1_random 10314 13261 GGERV28_I-int 287 - 10314 13261 0 4 1315,55,172,503, 0,1919,2001,2444, -,-,-,-, 523854 LTR ERVK 585 chr5_NT_460425v1_random 14495 17105 GGLTR7-int 632 + 14495 17105 0 5 295,269,926,293,600, 0,496,782,1708,2010, +,+,+,+,+, 523855 LTR ERV1 585 chr5_NT_460426v1_random 13544 14683 CR1-B2 195 + 13544 14683 0 2 402,726, 0,413, +,+, 523863 LINE CR1 585 chr5_NT_460428v1_random 6224 12121 CR1-G 734 - 6224 12121 0 2 454,2305, 0,3592, -,-, 523887 LINE CR1 585 chr5_NT_460428v1_random 6675 9555 CR1-C 858 - 6675 9555 0 2 2450,430, 0,2450, -,-, 523888 LINE CR1 585 chr5_NT_460428v1_random 20075 22402 CR1-C 696 - 20075 22402 0 3 2152,66,62, 0,2199,2265, -,-,-, 523895 LINE CR1 585 chr5_NT_460429v1_random 5028 10833 CR1-G 596 - 5028 10833 0 2 392,2296, 0,3509, -,-, 523899 LINE CR1 585 chr5_NT_460429v1_random 5412 8281 CR1-C 845 - 5412 8281 0 2 2435,434, 0,2435, -,-, 523900 LINE CR1 585 chr5_NT_460429v1_random 18329 22387 CR1-G 692 - 18329 22387 0 2 454,469, 0,3589, -,-, 523906 LINE CR1 585 chr5_NT_460429v1_random 18780 21657 CR1-C 857 - 18780 21657 0 2 2447,430, 0,2447, -,-, 523907 LINE CR1 585 chr5_NT_460434v1_random 19714 20182 CR1-Y 570 + 19714 20182 0 2 154,240, 0,228, +,+, 523980 LINE CR1 585 chr5_NT_460435v1_random 18015 18551 GGLTR3D 445 + 18015 18551 0 2 265,116, 0,420, +,+, 523997 LTR ERVL 585 chr5_NT_460436v1_random 12612 13617 GGERV20_I-int 241 + 12612 13617 0 2 80,494, 0,511, +,+, 524010 LTR ERVL 585 chr5_NT_460437v1_random 6086 7394 CR1-Y 721 + 6086 7394 0 2 1187,121, 0,1187, +,+, 524019 LINE CR1 585 chr5_NT_460439v1_random 3305 3834 GGLTR3F1 936 - 3305 3834 0 2 493,36, 0,493, -,-, 524042 LTR ERVL 585 chr5_NT_460439v1_random 3834 9639 GGLTR3F1 902 - 3834 9639 0 2 5310,494, 0,5311, -,-, 524043 LTR ERVL 585 chr5_NT_460441v1_random 15863 17294 CR1-F 792 - 15863 17294 0 2 992,411, 0,1020, -,-, 524060 LINE CR1 585 chr5_NT_460443v1_random 16780 17204 CR1-C4 540 - 16780 17204 0 2 280,103, 0,321, -,-, 524081 LINE CR1 585 chr5_NT_460444v1_random 4041 4971 CR1-Y 571 + 4041 4971 0 3 534,162,107, 0,650,823, +,+,+, 524088 LINE CR1 585 chr5_NT_460444v1_random 5002 5127 G-rich 583 + 5002 5127 0 2 37,33, 0,92, +,+, 524089 Low_complexity Low_complexity 585 chr5_NT_460444v1_random 13958 15110 CR1-Y 579 + 13958 15110 0 3 160,824,122, 0,206,1030, +,+,+, 524101 LINE CR1 585 chr5_NT_460446v1_random 2332 4092 CR1-F2 474 - 2332 4092 0 2 641,91, 0,1669, -,-, 524123 LINE CR1 585 chr5_NT_460490v1_random 7341 7792 CR1-Y1_Aves 235 - 7341 7792 0 2 278,149, 0,302, -,-, 524464 LINE CR1 585 chr5_NT_460498v1_random 4909 9360 GGLTR7A 859 - 4909 9360 0 2 4375,72, 0,4379, -,-, 524512 LTR ERV1 585 chr5_NT_460508v1_random 5327 6002 CR1-F2 544 - 5327 6002 0 2 160,513, 0,162, -,-, 524575 LINE CR1 585 chr5_NT_460508v1_random 7965 8728 CR1-L3A_Croc 28 + 7965 8728 0 2 255,209, 0,554, +,+, 524577 LINE CR1 585 chr5_NT_460512v1_random 3980 4041 (CTT)n 398 + 3980 4041 0 2 17,6, 0,55, +,+, 524599 Simple_repeat Simple_repeat 585 chr5_NT_460516v1_random 3866 4603 CR1-F 367 - 3866 4603 0 2 55,661, 0,76, -,-, 524625 LINE CR1 585 chr5_NT_460517v1_random 8948 9779 CR1-L3B_Croc 286 + 8948 9779 0 2 143,415, 0,416, +,+, 524635 LINE CR1 585 chr5_NT_460523v1_random 838 1238 CR1-G 839 + 838 1238 0 2 59,325, 0,75, +,+, 524658 LINE CR1 585 chr5_NT_460523v1_random 4691 5090 CR1-G 841 + 4691 5090 0 2 60,333, 0,66, +,+, 524661 LINE CR1 585 chr5_NT_460523v1_random 8862 9263 CR1-G 844 + 8862 9263 0 2 60,335, 0,66, +,+, 524666 LINE CR1 585 chr5_NT_460533v1_random 7763 9022 CR1-X1 603 + 7763 9022 0 3 141,969,149, 0,141,1110, +,+,+, 524731 LINE CR1 585 chr5_NT_460534v1_random 4150 9149 GGLTR7-int 797 - 4150 9149 0 3 581,260,4158, 0,581,841, -,-,-, 524735 LTR ERV1 585 chr5_NT_460549v1_random 7608 8074 CR1-L3B_Croc 265 + 7608 8074 0 2 100,118, 0,348, +,+, 524791 LINE CR1 585 chr5_NT_460551v1_random 3710 4802 GGLTR1 937 - 3710 4802 0 2 851,241, 0,851, -,-, 524803 LTR ERVK 585 chr5_NT_460554v1_random 6299 8593 GGERVL-A-int 816 + 6299 8593 0 2 716,1578, 0,716, +,+, 524827 LTR ERVL 585 chr5_NT_460568v1_random 1058 2305 CR1-C2 612 - 1058 2305 0 3 105,348,794, 0,105,453, -,-,-, 524879 LINE CR1 585 chr5_NT_460571v1_random 1628 6302 GGERVL18-int 661 + 1628 6302 0 6 297,1087,1312,323,1233,264, 0,453,1540,2854,3177,4410, +,+,+,+,+,+, 524896 LTR ERVL 585 chr5_NT_460581v1_random 3375 3740 Mariner1_GG 693 - 3375 3740 0 2 175,190, 0,175, -,-, 524927 DNA TcMar-Mariner 585 chr5_NT_460633v1_random 2066 2247 CR1-F2 430 + 2066 2247 0 2 105,76, 0,105, +,+, 525103 LINE CR1 585 chr5_NT_460653v1_random 462 3836 CR1-Y2 784 + 462 3836 0 2 1816,1015, 0,2359, +,+, 525162 LINE CR1 585 chr5_NT_460653v1_random 3836 4068 GGERV10_LTR 620 - 3836 4068 0 2 99,37, 0,195, -,-, 525164 LTR ERVL 585 chr5_NT_460707v1_random 2763 4139 CR1-C 715 + 2763 4139 0 2 116,1260, 0,116, +,+, 525287 LINE CR1 585 chr5_NT_460717v1_random 2309 3137 CR1-F2 475 - 2309 3137 0 2 87,157, 0,671, -,-, 525311 LINE CR1 585 chr5_NT_460769v1_random 1660 2001 REP131 245 - 1660 2001 0 2 202,93, 0,248, -,-, 525399 DNA? DNA? 585 chr5_NT_460785v1_random 1784 2156 GGLTR7-int 380 + 1784 2156 0 2 89,279, 0,93, +,+, 525427 LTR ERV1 585 chr5_NT_460818v1_random 32 109 (T)n 872 + 32 109 0 2 34,22, 0,55, +,+, 525467 Simple_repeat Simple_repeat 585 chr5_NT_460818v1_random 393 566 (A)n 937 + 393 566 0 3 26,19,19, 0,78,154, +,+,+, 525468 Simple_repeat Simple_repeat 585 chr5_NT_460825v1_random 361 721 (ACCCCATAGGG)n 598 - 361 721 0 2 170,40, 0,320, -,-, 525476 Satellite Satellite 585 chr5_NT_460827v1_random 3288 4728 ENS1-int 595 - 3288 4728 0 3 782,102,149, 0,782,1291, -,-,-, 525484 LTR ERVL 585 chr5_NT_460828v1_random 3408 8784 ENS1-int 616 - 3408 8784 0 5 782,102,149,1103,656, 0,782,1291,2635,4720, -,-,-,-,-, 525490 LTR ERVL 585 chr5_NT_460829v1_random 4698 6640 GGERV28_I-int 194 + 4698 6640 0 2 648,94, 0,1848, +,+, 525501 LTR ERVK 588 chr6 513177 513622 GGLTR7-int 360 - 513177 513622 0 2 73,184, 0,261, -,-, 525518 LTR ERV1 588 chr6 515351 515463 A-rich 272 + 515351 515463 0 2 14,25, 0,87, +,+, 525521 Low_complexity Low_complexity 588 chr6 516084 516507 ENS1B-LTR 186 + 516084 516507 0 2 134,258, 0,165, +,+, 525524 LTR ERVL 588 chr6 522475 523516 CR1-D2 779 - 522475 523516 0 2 94,574, 0,467, -,-, 525530 LINE CR1 589 chr6 552651 553107 Mariner1b_GG 607 - 552651 553107 0 2 315,139, 0,317, -,-, 525545 DNA TcMar-Mariner 589 chr6 641652 642771 CR1-X2 597 - 641652 642771 0 2 174,924, 0,195, -,-, 525585 LINE CR1 590 chr6 661376 662681 REP131 223 - 661376 662681 0 2 761,114, 0,1191, -,-, 525594 DNA? DNA? 591 chr6 882524 882851 GGERV10_LTR 746 + 882524 882851 0 2 81,158, 0,169, +,+, 525673 LTR ERVL 592 chr6 1001896 1002989 Mariner1_GG 582 - 1001896 1002989 0 2 784,309, 0,784, -,-, 525714 DNA TcMar-Mariner 592 chr6 1003576 1004472 CR1-F2 472 - 1003576 1004472 0 2 120,753, 0,143, -,-, 525715 LINE CR1 592 chr6 1017927 1017991 (TTTTATG)n 358 + 1017927 1017991 0 2 22,6, 0,58, +,+, 525724 Simple_repeat Simple_repeat 593 chr6 1109654 1116825 CR1-E 622 - 1109654 1116825 0 2 182,214, 0,6957, -,-, 525765 LINE CR1 593 chr6 1111954 1114407 CR1-F2 557 + 1111954 1114407 0 3 1220,241,992, 0,1220,1461, +,+,+, 525766 LINE CR1 593 chr6 1167436 1168083 GGLTR9 525 + 1167436 1168083 0 2 67,174, 0,473, +,+, 525782 LTR ERVL 593 chr6 1167517 1167842 GGERV10_LTR 673 - 1167517 1167842 0 2 158,78, 0,247, -,-, 525784 LTR ERVL 594 chr6 1235737 1236345 CR1-Y4 601 + 1235737 1236345 0 2 396,188, 0,420, +,+, 525809 LINE CR1 595 chr6 1331778 1334076 CR1-F 523 + 1331778 1334076 0 3 103,618,833, 0,182,1465, +,+,+, 525853 LINE CR1 595 chr6 1425094 1425196 (T)n 848 + 1425094 1425196 0 2 20,45, 0,57, +,+, 525912 Simple_repeat Simple_repeat 596 chr6 1547212 1547595 CR1-C3 629 - 1547212 1547595 0 2 307,76, 0,307, -,-, 525978 LINE CR1 596 chr6 1550320 1555269 CR1-Y4 219 + 1550320 1555269 0 3 790,703,262, 0,3960,4687, +,+,+, 525981 LINE CR1 596 chr6 1551099 1554242 CR1-F 886 - 1551099 1554242 0 2 1861,361, 0,2782, -,-, 525982 LINE CR1 596 chr6 1558044 1558846 CR1-X2 251 - 1558044 1558846 0 2 204,520, 0,282, -,-, 525984 LINE CR1 596 chr6 1561096 1562488 CR1-C4 456 + 1561096 1562488 0 3 117,656,274, 0,117,1118, +,+,+, 525987 LINE CR1 597 chr6 1614721 1616050 CR1-C4 609 + 1614721 1616050 0 2 107,1217, 0,112, +,+, 526016 LINE CR1 597 chr6 1626840 1627564 CR1-B2 463 - 1626840 1627564 0 2 38,686, 0,38, -,-, 526019 LINE CR1 597 chr6 1662557 1665007 CR1-F 935 - 1662557 1665007 0 2 910,1538, 0,912, -,-, 526036 LINE CR1 598 chr6 1775790 1776024 CR1-11_Crp 114 + 1775790 1776024 0 2 128,65, 0,169, +,+, 526080 LINE CR1 599 chr6 1907821 1908364 CR1-D 405 - 1907821 1908364 0 2 286,257, 0,286, -,-, 526156 LINE CR1 600 chr6 1966855 1967244 CR1-F0 974 - 1966855 1967244 0 2 108,272, 0,117, -,-, 526180 LINE CR1 600 chr6 2001810 2002119 CR1-D2 643 + 2001810 2002119 0 2 211,98, 0,211, +,+, 526201 LINE CR1 601 chr6 2187362 2190567 CR1-H 774 + 2187362 2190567 0 2 669,2536, 0,669, +,+, 526293 LINE CR1 601 chr6 2204404 2214052 Char12Mar1_GG 510 - 2204404 2214052 0 2 544,343, 0,9305, -,-, 526300 DNA hAT-Charlie 601 chr6 2224923 2225615 CR1-C2 855 + 2224923 2225615 0 2 241,446, 0,246, +,+, 526317 LINE CR1 603 chr6 2397788 2398128 CR1-D 772 - 2397788 2398128 0 2 55,68, 0,272, -,-, 526386 LINE CR1 604 chr6 2497549 2497684 (CCCGC)n 533 + 2497549 2497684 0 2 33,61, 0,74, +,+, 526443 Simple_repeat Simple_repeat 604 chr6 2505943 2507336 CR1-Y2_Aves 178 + 2505943 2507336 0 2 262,1131, 0,262, +,+, 526447 LINE CR1 604 chr6 2519443 2519674 CR1-F2 519 + 2519443 2519674 0 2 150,69, 0,162, +,+, 526454 LINE CR1 605 chr6 2636632 2642272 CR1-D 523 - 2636632 2642272 0 3 164,1013,349, 0,4044,5291, -,-,-, 526522 LINE CR1 605 chr6 2692746 2696972 CR1-C4 387 - 2692746 2696972 0 2 185,130, 0,4096, -,-, 526555 LINE CR1 605 chr6 2747702 2748009 CR1-Y3 538 - 2747702 2748009 0 2 19,76, 0,231, -,-, 526589 LINE CR1 606 chr6 2823266 2823593 CR1-C 578 - 2823266 2823593 0 2 196,59, 0,268, -,-, 526615 LINE CR1 607 chr6 2894724 2894834 (TATA)n 254 + 2894724 2894834 0 2 32,43, 0,67, +,+, 526649 Simple_repeat Simple_repeat 607 chr6 2898258 2900007 GGLTR5A 402 - 2898258 2900007 0 2 169,380, 0,1369, -,-, 526651 LTR ERVL 607 chr6 2898427 2899619 Mariner1_GG 514 - 2898427 2899619 0 2 733,457, 0,735, -,-, 526652 DNA TcMar-Mariner 607 chr6 2913208 2913411 (TA)n 360 + 2913208 2913411 0 2 21,78, 0,125, +,+, 526656 Simple_repeat Simple_repeat 608 chr6 3072880 3073360 Charlie12_GG 552 - 3072880 3073360 0 2 195,59, 0,421, -,-, 526729 DNA hAT-Charlie 608 chr6 3113874 3114281 AmnSINE1 330 + 3113874 3114281 0 2 152,221, 0,186, +,+, 526744 SINE 5S-Deu-L2 609 chr6 3165986 3167127 CR1-C3 649 - 3165986 3167127 0 2 282,859, 0,282, -,-, 526771 LINE CR1 609 chr6 3238768 3239724 CR1-Y2_Aves 140 + 3238768 3239724 0 2 281,653, 0,303, +,+, 526804 LINE CR1 610 chr6 3335871 3336647 CR1-C2 821 + 3335871 3336647 0 2 304,150, 0,626, +,+, 526847 LINE CR1 610 chr6 3345467 3345868 CR1-Y4 498 + 3345467 3345868 0 2 252,141, 0,260, +,+, 526849 LINE CR1 610 chr6 3350723 3351499 CR1-C2 821 + 3350723 3351499 0 2 304,150, 0,626, +,+, 526851 LINE CR1 610 chr6 3360312 3361008 CR1-Y2 331 + 3360312 3361008 0 2 273,415, 0,281, +,+, 526853 LINE CR1 611 chr6 3520770 3523087 CR1-F2 294 - 3520770 3523087 0 2 240,182, 0,2135, -,-, 526929 LINE CR1 612 chr6 3559072 3559449 CR1-Y2_Aves 376 + 3559072 3559449 0 2 185,132, 0,245, +,+, 526950 LINE CR1 612 chr6 3597924 3597975 (ACAA)n 602 + 3597924 3597975 0 2 6,9, 0,42, +,+, 526976 Simple_repeat Simple_repeat 613 chr6 3716622 3717487 CR1-C 677 - 3716622 3717487 0 2 403,356, 0,509, -,-, 527037 LINE CR1 613 chr6 3719849 3723124 CR1-C2 712 - 3719849 3723124 0 2 105,295, 0,2980, -,-, 527039 LINE CR1 613 chr6 3735147 3737340 CR1-C2 690 - 3735147 3737340 0 2 107,295, 0,1898, -,-, 527051 LINE CR1 614 chr6 3807498 3808027 CR1-D2 500 - 3807498 3808027 0 2 100,85, 0,444, -,-, 527102 LINE CR1 615 chr6 4006076 4007893 CR1-C4 426 - 4006076 4007893 0 2 788,58, 0,1759, -,-, 527224 LINE CR1 615 chr6 4018537 4019452 GGLTR5A 426 + 4018537 4019452 0 2 384,170, 0,745, +,+, 527237 LTR ERVL 616 chr6 4127857 4128222 GGLTR4A 435 - 4127857 4128222 0 2 144,167, 0,198, -,-, 527316 LTR ERVL 616 chr6 4189325 4189400 A-rich 310 + 4189325 4189400 0 2 31,25, 0,50, +,+, 527359 Low_complexity Low_complexity 617 chr6 4239230 4239393 Chompy-2353_AMi 523 - 4239230 4239393 0 2 65,55, 0,108, -,-, 527389 DNA PIF-Harbinger 617 chr6 4276646 4280596 Char12Mar1_GG 366 - 4276646 4280596 0 2 59,467, 0,3483, -,-, 527412 DNA hAT-Charlie 618 chr6 4376672 4377933 Charlie12_GG 496 - 4376672 4377933 0 4 303,246,477,186, 0,306,587,1075, -,-,-,-, 527457 DNA hAT-Charlie 618 chr6 4412495 4413667 Char12Mar1_GG 577 - 4412495 4413667 0 2 253,293, 0,879, -,-, 527479 DNA hAT-Charlie 618 chr6 4435086 4435151 (TCTTT)n 598 + 4435086 4435151 0 2 13,14, 0,51, +,+, 527491 Simple_repeat Simple_repeat 619 chr6 4546002 4546466 Mariner1b_GG 787 - 4546002 4546466 0 2 208,31, 0,433, -,-, 527550 DNA TcMar-Mariner 620 chr6 4627036 4627460 CR1-Y4 453 - 4627036 4627460 0 2 291,133, 0,291, -,-, 527591 LINE CR1 620 chr6 4702306 4702659 GGLTR4B 585 - 4702306 4702659 0 2 63,252, 0,101, -,-, 527620 LTR ERVL 622 chr6 4941359 4942168 CR1-Y4 510 - 4941359 4942168 0 2 441,365, 0,444, -,-, 527736 LINE CR1 623 chr6 5049235 5057293 CR1-C2 744 - 5049235 5057293 0 2 170,90, 0,7968, -,-, 527774 LINE CR1 625 chr6 5266714 5267331 CR1-E 732 - 5266714 5267331 0 2 239,73, 0,544, -,-, 527865 LINE CR1 625 chr6 5318528 5319990 CR1-C3 531 - 5318528 5319990 0 3 394,337,731, 0,394,731, -,-,-, 527883 LINE CR1 625 chr6 5331354 5331887 CR1-C2 491 + 5331354 5331887 0 2 92,432, 0,101, +,+, 527887 LINE CR1 625 chr6 5355919 5363433 CR1-F2 403 + 5355919 5363433 0 2 94,122, 0,7392, +,+, 527896 LINE CR1 625 chr6 5359542 5360735 CR1-C4 537 + 5359542 5360735 0 2 479,705, 0,488, +,+, 527900 LINE CR1 626 chr6 5433307 5433794 CR1-Y3 738 - 5433307 5433794 0 2 297,190, 0,297, -,-, 527924 LINE CR1 628 chr6 5678777 5679521 CR1-Y4 453 - 5678777 5679521 0 2 173,571, 0,173, -,-, 528030 LINE CR1 628 chr6 5689884 5691327 CR1-C4 595 + 5689884 5691327 0 2 1243,200, 0,1243, +,+, 528041 LINE CR1 628 chr6 5692093 5693789 CR1-D 698 - 5692093 5693789 0 2 1349,344, 0,1352, -,-, 528043 LINE CR1 629 chr6 5796043 5796090 (TTTTA)n 414 + 5796043 5796090 0 2 14,6, 0,41, +,+, 528083 Simple_repeat Simple_repeat 629 chr6 5844637 5845078 CR1-F2 358 + 5844637 5845078 0 2 90,351, 0,90, +,+, 528105 LINE CR1 629 chr6 5870977 5871194 Char12Mar1_GG 718 - 5870977 5871194 0 2 176,41, 0,176, -,-, 528124 DNA hAT-Charlie 630 chr6 6009621 6010323 CR1-C3 603 - 6009621 6010323 0 2 268,429, 0,273, -,-, 528192 LINE CR1 630 chr6 6018158 6019289 CR1-C2 595 + 6018158 6019289 0 2 75,107, 0,1024, +,+, 528195 LINE CR1 630 chr6 6021915 6022234 CR1-F 908 - 6021915 6022234 0 2 181,138, 0,181, -,-, 528199 LINE CR1 630 chr6 6022309 6025593 CR1-C2 722 + 6022309 6025593 0 2 295,107, 0,3177, +,+, 528200 LINE CR1 630 chr6 6028218 6028537 CR1-F 908 - 6028218 6028537 0 2 181,138, 0,181, -,-, 528206 LINE CR1 78 chr6 6028612 6031886 CR1-C2 666 + 6028612 6031886 0 2 295,100, 0,3174, +,+, 528207 LINE CR1 631 chr6 6034465 6034780 CR1-F 876 - 6034465 6034780 0 2 179,136, 0,179, -,-, 528214 LINE CR1 631 chr6 6034855 6035744 CR1-C2 676 + 6034855 6035744 0 2 182,109, 0,780, +,+, 528215 LINE CR1 631 chr6 6038330 6038632 CR1-F 743 - 6038330 6038632 0 2 158,134, 0,168, -,-, 528219 LINE CR1 631 chr6 6038702 6041975 CR1-C2 715 + 6038702 6041975 0 2 296,107, 0,3166, +,+, 528220 LINE CR1 631 chr6 6044603 6044922 CR1-F 903 - 6044603 6044922 0 2 181,138, 0,181, -,-, 528228 LINE CR1 631 chr6 6050915 6051234 CR1-F 908 - 6050915 6051234 0 2 181,138, 0,181, -,-, 528237 LINE CR1 631 chr6 6053882 6057349 GGLTR10C2 532 - 6053882 6057349 0 3 370,2722,375, 0,370,3092, -,-,-, 528242 LTR ERVK 631 chr6 6057352 6058109 CR1-C 860 + 6057352 6058109 0 2 184,573, 0,184, +,+, 528243 LINE CR1 631 chr6 6067332 6068714 CR1-C4 486 + 6067332 6068714 0 2 200,1181, 0,201, +,+, 528252 LINE CR1 631 chr6 6099350 6102140 CR1-F 897 - 6099350 6102140 0 2 628,2162, 0,628, -,-, 528264 LINE CR1 632 chr6 6244233 6245051 CR1-C4 508 + 6244233 6245051 0 2 325,479, 0,339, +,+, 528331 LINE CR1 633 chr6 6340659 6341554 CR1-Y4 581 + 6340659 6341554 0 2 409,92, 0,803, +,+, 528380 LINE CR1 634 chr6 6439852 6442987 Char12Mar1_GG 447 - 6439852 6442987 0 2 950,307, 0,2828, -,-, 528436 DNA hAT-Charlie 634 chr6 6462926 6463905 CR1-D2 615 + 6462926 6463905 0 2 126,822, 0,157, +,+, 528453 LINE CR1 634 chr6 6526295 6526896 CR1-X 418 + 6526295 6526896 0 2 228,373, 0,228, +,+, 528479 LINE CR1 634 chr6 6538479 6543141 CR1-F2 595 - 6538479 6543141 0 2 169,245, 0,4417, -,-, 528487 LINE CR1 635 chr6 6591505 6593153 GGERVL-C-int 181 + 6591505 6593153 0 3 280,345,252, 0,786,1396, +,+,+, 528514 LTR ERVL 636 chr6 6723514 6725966 Mariner1b_GG 555 - 6723514 6725966 0 2 305,179, 0,2273, -,-, 528581 DNA TcMar-Mariner 636 chr6 6776447 6777580 CR1-D2 569 - 6776447 6777580 0 2 490,620, 0,513, -,-, 528606 LINE CR1 637 chr6 6913921 6914742 GGLTR5B 632 - 6913921 6914742 0 2 198,302, 0,519, -,-, 528676 LTR ERVL 638 chr6 6970612 6973701 CR1-C4 511 + 6970612 6973701 0 2 428,1897, 0,1192, +,+, 528703 LINE CR1 638 chr6 6980885 6981424 CR1-X2 340 + 6980885 6981424 0 2 244,217, 0,322, +,+, 528710 LINE CR1 638 chr6 7041299 7042841 CR1-D2 625 - 7041299 7042841 0 3 494,51,575, 0,494,967, -,-,-, 528757 LINE CR1 638 chr6 7041823 7042269 CR1-D 688 + 7041823 7042269 0 2 195,251, 0,195, +,+, 528758 LINE CR1 638 chr6 7052669 7053901 GGERVL-C-int 862 - 7052669 7053901 0 2 528,704, 0,528, -,-, 528762 LTR ERVL 638 chr6 7053899 7059028 GGLTR3A 829 - 7053899 7059028 0 2 4601,528, 0,4601, -,-, 528763 LTR ERVL 639 chr6 7091453 7093820 CR1-G 411 + 7091453 7093820 0 2 449,1918, 0,449, +,+, 528787 LINE CR1 639 chr6 7107924 7108016 (TA)n 176 + 7107924 7108016 0 2 34,22, 0,70, +,+, 528791 Simple_repeat Simple_repeat 639 chr6 7170149 7171058 CR1-G 549 + 7170149 7171058 0 3 309,181,361, 0,365,548, +,+,+, 528829 LINE CR1 639 chr6 7171286 7176285 CR1-F2 509 + 7171286 7176285 0 2 146,129, 0,4870, +,+, 528832 LINE CR1 639 chr6 7171432 7176156 ENS1-LTR 908 - 7171432 7176156 0 3 956,2812,956, 0,956,3768, -,-,-, 528833 LTR ERVL 640 chr6 7228576 7229494 CR1-Y2_Aves 238 - 7228576 7229494 0 2 344,564, 0,354, -,-, 528872 LINE CR1 641 chr6 7370952 7371741 CR1-Y2_Aves 242 + 7370952 7371741 0 2 364,425, 0,364, +,+, 528951 LINE CR1 641 chr6 7458531 7460309 CR1-D 733 - 7458531 7460309 0 2 1607,171, 0,1607, -,-, 528998 LINE CR1 642 chr6 7476077 7476681 GGLTR3A 608 - 7476077 7476681 0 2 110,450, 0,154, -,-, 529004 LTR ERVL 642 chr6 7600466 7600798 ENS1B-LTR 535 + 7600466 7600798 0 2 144,181, 0,151, +,+, 529047 LTR ERVL 643 chr6 7668958 7670840 CR1-C4 660 + 7668958 7670840 0 2 149,1021, 0,861, +,+, 529081 LINE CR1 643 chr6 7669109 7669816 CR1-F2 463 - 7669109 7669816 0 2 617,90, 0,617, -,-, 529082 LINE CR1 643 chr6 7684208 7684357 CR1-F2 913 - 7684208 7684357 0 2 60,89, 0,60, -,-, 529087 LINE CR1 647 chr6 8156452 8156920 CR1-C 741 + 8156452 8156920 0 2 115,353, 0,115, +,+, 529269 LINE CR1 648 chr6 8273530 8273608 (ATGT)n 400 + 8273530 8273608 0 2 19,6, 0,72, +,+, 529306 Simple_repeat Simple_repeat 648 chr6 8339241 8339911 CR1-L3B_Croc 238 + 8339241 8339911 0 2 257,412, 0,258, +,+, 529330 LINE CR1 650 chr6 8549271 8550022 CR1-E 744 - 8549271 8550022 0 2 388,363, 0,388, -,-, 529451 LINE CR1 651 chr6 8705070 8705185 (GTTT)n 420 + 8705070 8705185 0 2 14,36, 0,79, +,+, 529511 Simple_repeat Simple_repeat 651 chr6 8737323 8737691 GGERVL18-LTR 793 - 8737323 8737691 0 2 30,338, 0,30, -,-, 529520 LTR ERVL 651 chr6 8779478 8781073 CR1-X 327 + 8779478 8781073 0 2 579,357, 0,1238, +,+, 529535 LINE CR1 652 chr6 8880707 8881308 GGLTR8A 441 + 8880707 8881308 0 2 258,343, 0,258, +,+, 529554 LTR ERVL 655 chr6 9226242 9227898 CR1-Y4 158 + 9226242 9227898 0 2 1472,106, 0,1550, +,+, 529682 LINE CR1 655 chr6 9230993 9231763 CR1-X2 309 - 9230993 9231763 0 2 160,570, 0,200, -,-, 529683 LINE CR1 655 chr6 9234059 9235458 CR1-C4 433 + 9234059 9235458 0 3 105,672,274, 0,105,1125, +,+,+, 529687 LINE CR1 655 chr6 9246683 9247471 ENS1-LTR 382 - 9246683 9247471 0 2 356,432, 0,356, -,-, 529695 LTR ERVL 655 chr6 9266206 9271058 CR1AVI 226 + 9266206 9271058 0 2 16,182, 0,4670, +,+, 529709 LINE CR1 655 chr6 9298073 9298693 Char12Mar1_GG 518 + 9298073 9298693 0 2 289,287, 0,333, +,+, 529736 DNA hAT-Charlie 656 chr6 9349789 9351711 CR1-C3 614 - 9349789 9351711 0 2 1353,569, 0,1353, -,-, 529770 LINE CR1 656 chr6 9365852 9367451 CR1-E 504 - 9365852 9367451 0 2 188,200, 0,1399, -,-, 529771 LINE CR1 656 chr6 9397050 9397830 CR1-F2 320 - 9397050 9397830 0 2 110,540, 0,240, -,-, 529789 LINE CR1 657 chr6 9459123 9460380 CR1-Y4 578 - 9459123 9460380 0 2 558,699, 0,558, -,-, 529818 LINE CR1 657 chr6 9476745 9477703 GGERVL-C-int 602 + 9476745 9477703 0 3 324,122,512, 0,324,446, +,+,+, 529830 LTR ERVL 657 chr6 9527831 9528466 CR1-D2 621 + 9527831 9528466 0 2 112,517, 0,118, +,+, 529859 LINE CR1 657 chr6 9529834 9530374 GGLTR5B 312 + 9529834 9530374 0 2 322,184, 0,356, +,+, 529862 LTR ERVL 657 chr6 9559216 9559634 CR1-L3A_Croc 217 - 9559216 9559634 0 2 258,125, 0,293, -,-, 529875 LINE CR1 658 chr6 9580424 9582088 CR1-D 766 + 9580424 9582088 0 2 194,767, 0,897, +,+, 529882 LINE CR1 659 chr6 9704888 9705377 CR1-D2 650 + 9704888 9705377 0 2 406,83, 0,406, +,+, 529940 LINE CR1 659 chr6 9715079 9715186 G-rich 356 + 9715079 9715186 0 2 11,23, 0,84, +,+, 529947 Low_complexity Low_complexity 659 chr6 9738784 9739308 CR1-C4 524 + 9738784 9739308 0 2 434,87, 0,437, +,+, 529957 LINE CR1 659 chr6 9748105 9749332 CR1-Y2_Aves 286 - 9748105 9749332 0 3 889,251,86, 0,889,1141, -,-,-, 529963 LINE CR1 659 chr6 9799829 9802024 CR1-C3 684 - 9799829 9802024 0 2 1665,530, 0,1665, -,-, 529978 LINE CR1 661 chr6 9971344 9972338 CR1-D2 577 + 9971344 9972338 0 2 440,509, 0,485, +,+, 530037 LINE CR1 661 chr6 9989402 9990018 Char12Mar1_GG 576 - 9989402 9990018 0 2 146,470, 0,146, -,-, 530042 DNA hAT-Charlie 662 chr6 10103682 10104104 GGLTR8B 548 + 10103682 10104104 0 2 294,117, 0,305, +,+, 530099 LTR ERVL 662 chr6 10118084 10120520 CR1-C4 542 + 10118084 10120520 0 2 340,831, 0,1605, +,+, 530111 LINE CR1 662 chr6 10153570 10154875 CR1-C3 394 - 10153570 10154875 0 2 571,717, 0,588, -,-, 530127 LINE CR1 663 chr6 10266556 10268856 CR1-C4 584 + 10266556 10268856 0 2 134,2166, 0,134, +,+, 530187 LINE CR1 663 chr6 10306276 10310408 GGLTR10A 929 + 10306276 10310408 0 3 284,3560,286, 0,286,3846, +,+,+, 530207 LTR ERVK 663 chr6 10310535 10311674 CR1-C3 436 + 10310535 10311674 0 2 78,498, 0,641, +,+, 530208 LINE CR1 663 chr6 10326747 10327164 CR1-Y1_Aves 433 - 10326747 10327164 0 3 210,133,72, 0,212,345, -,-,-, 530218 LINE CR1 663 chr6 10335967 10337203 CR1-C4 592 - 10335967 10337203 0 2 273,272, 0,964, -,-, 530222 LINE CR1 664 chr6 10372471 10374224 Mariner1_GG 624 - 10372471 10374224 0 2 48,222, 0,1531, -,-, 530245 DNA TcMar-Mariner 664 chr6 10377708 10379160 CR1-C4 487 - 10377708 10379160 0 4 265,442,344,52, 0,611,1053,1400, -,-,-,-, 530250 LINE CR1 664 chr6 10381083 10381426 CR1-X2 236 + 10381083 10381426 0 2 145,177, 0,166, +,+, 530252 LINE CR1 664 chr6 10414244 10415818 CR1-B2 735 + 10414244 10415818 0 2 297,1277, 0,297, +,+, 530269 LINE CR1 666 chr6 10630125 10631559 CR1-C4 543 + 10630125 10631559 0 2 490,648, 0,786, +,+, 530358 LINE CR1 667 chr6 10792886 10792931 (GTTGTT)n 470 + 10792886 10792931 0 2 7,7, 0,38, +,+, 530425 Simple_repeat Simple_repeat 667 chr6 10795642 10796105 CR1-Y4 661 + 10795642 10796105 0 2 56,407, 0,56, +,+, 530430 LINE CR1 668 chr6 10950510 10950667 CR1-Y4 711 - 10950510 10950667 0 2 97,60, 0,97, -,-, 530505 LINE CR1 669 chr6 11075385 11077138 Mariner1_GG 619 - 11075385 11077138 0 2 48,222, 0,1531, -,-, 530566 DNA TcMar-Mariner 669 chr6 11080621 11082072 CR1-C4 510 - 11080621 11082072 0 4 264,442,344,52, 0,610,1052,1399, -,-,-,-, 530571 LINE CR1 669 chr6 11084190 11084533 CR1-X2 219 + 11084190 11084533 0 2 145,177, 0,166, +,+, 530573 LINE CR1 669 chr6 11087408 11089060 CR1-Y4 113 - 11087408 11089060 0 2 174,1437, 0,215, -,-, 530574 LINE CR1 669 chr6 11131275 11133028 Mariner1_GG 624 - 11131275 11133028 0 2 48,222, 0,1531, -,-, 530599 DNA TcMar-Mariner 670 chr6 11141840 11143290 CR1-C4 548 - 11141840 11143290 0 4 268,437,340,53, 0,618,1055,1397, -,-,-,-, 530613 LINE CR1 670 chr6 11148538 11150103 CR1-Y4 215 - 11148538 11150103 0 4 156,670,89,323, 0,215,1136,1242, -,-,-,-, 530617 LINE CR1 671 chr6 11365184 11366025 CR1-D2 518 + 11365184 11366025 0 2 126,708, 0,133, +,+, 530697 LINE CR1 672 chr6 11470731 11471023 CR1-F0 288 + 11470731 11471023 0 2 85,205, 0,87, +,+, 530723 LINE CR1 673 chr6 11593067 11593425 CR1-C4 557 - 11593067 11593425 0 2 308,50, 0,308, -,-, 530779 LINE CR1 674 chr6 11700915 11701620 CR1-F2 419 - 11700915 11701620 0 2 385,318, 0,387, -,-, 530829 LINE CR1 674 chr6 11789102 11789483 CR1-C4 646 - 11789102 11789483 0 2 153,228, 0,153, -,-, 530879 LINE CR1 676 chr6 11938026 11938438 (CATCC)n 565 + 11938026 11938438 0 2 180,203, 0,209, +,+, 530958 Simple_repeat Simple_repeat 676 chr6 11995748 11996182 REP131 177 - 11995748 11996182 0 2 177,120, 0,314, -,-, 530986 DNA? DNA? 676 chr6 12021037 12021845 CR1-C2 502 + 12021037 12021845 0 3 51,362,392, 0,54,416, +,+,+, 531001 LINE CR1 677 chr6 12072553 12074001 CR1-C4 411 + 12072553 12074001 0 4 80,336,411,266, 0,80,416,1182, +,+,+,+, 531035 LINE CR1 677 chr6 12178287 12178331 (ATTT)n 466 + 12178287 12178331 0 2 14,11, 0,33, +,+, 531102 Simple_repeat Simple_repeat 680 chr6 12573770 12574008 GGLTR5B 387 + 12573770 12574008 0 2 128,85, 0,153, +,+, 531276 LTR ERVL 681 chr6 12694237 12695965 CR1-G 527 - 12694237 12695965 0 2 1586,52, 0,1676, -,-, 531339 LINE CR1 682 chr6 12718550 12718947 CR1-Y2_Aves 231 + 12718550 12718947 0 2 242,151, 0,246, +,+, 531356 LINE CR1 682 chr6 12824152 12824493 Char12Mar1_GG 441 - 12824152 12824493 0 2 43,226, 0,115, -,-, 531433 DNA hAT-Charlie 683 chr6 12868827 12869306 Char12Mar1_GG 604 - 12868827 12869306 0 2 194,283, 0,196, -,-, 531456 DNA hAT-Charlie 683 chr6 12900629 12900898 CR1-Y1_Aves 468 + 12900629 12900898 0 2 149,100, 0,169, +,+, 531477 LINE CR1 683 chr6 12950992 12951391 CR1-D2 697 + 12950992 12951391 0 2 89,196, 0,203, +,+, 531511 LINE CR1 684 chr6 12990489 12991700 CR1-C4 488 + 12990489 12991700 0 2 259,952, 0,259, +,+, 531529 LINE CR1 684 chr6 13065833 13067148 CR1-C4 511 - 13065833 13067148 0 2 1007,308, 0,1007, -,-, 531566 LINE CR1 688 chr6 13585767 13586621 Char12Mar1_GG 547 - 13585767 13586621 0 3 243,527,72, 0,243,782, -,-,-, 531847 DNA hAT-Charlie 689 chr6 13752981 13753075 (T)n 944 + 13752981 13753075 0 2 19,19, 0,75, +,+, 531964 Simple_repeat Simple_repeat 690 chr6 13775014 13775242 GGLTR6 482 + 13775014 13775242 0 2 91,133, 0,95, +,+, 531980 LTR ERVL 690 chr6 13816549 13818672 CR1-C4 564 - 13816549 13818672 0 3 1002,716,243, 0,1002,1880, -,-,-, 532010 LINE CR1 690 chr6 13871418 13871497 A-rich 564 + 13871418 13871497 0 2 21,11, 0,68, +,+, 532036 Low_complexity Low_complexity 691 chr6 13932041 13932086 (TATG)n 402 + 13932041 13932086 0 2 6,16, 0,29, +,+, 532082 Simple_repeat Simple_repeat 691 chr6 13938095 13938146 (TTTC)n 464 + 13938095 13938146 0 2 16,9, 0,42, +,+, 532089 Simple_repeat Simple_repeat 691 chr6 13960779 13961587 CR1-F2 429 - 13960779 13961587 0 2 59,101, 0,707, -,-, 532101 LINE CR1 691 chr6 13966874 13967152 CR1-C4 532 + 13966874 13967152 0 2 213,26, 0,252, +,+, 532107 LINE CR1 691 chr6 14009758 14009855 (T)n 940 + 14009758 14009855 0 2 22,35, 0,62, +,+, 532140 Simple_repeat Simple_repeat 692 chr6 14101960 14103217 CR1-C4 377 - 14101960 14103217 0 2 720,537, 0,720, -,-, 532198 LINE CR1 692 chr6 14123742 14124398 TguLTR5e 211 + 14123742 14124398 0 2 156,334, 0,322, +,+, 532214 LTR ERVL 692 chr6 14138963 14139679 CR1-D2 679 + 14138963 14139679 0 2 498,218, 0,498, +,+, 532224 LINE CR1 693 chr6 14237430 14239808 Char12Mar1_GG 598 - 14237430 14239808 0 2 39,520, 0,1858, -,-, 532297 DNA hAT-Charlie 696 chr6 14568736 14568843 (GCGCC)n 394 + 14568736 14568843 0 2 13,65, 0,42, +,+, 532475 Simple_repeat Simple_repeat 696 chr6 14570970 14571062 (CGCCTC)n 352 + 14570970 14571062 0 2 9,37, 0,55, +,+, 532483 Simple_repeat Simple_repeat 697 chr6 14800924 14802179 CR1-L3A_Croc 257 - 14800924 14802179 0 2 461,313, 0,942, -,-, 532580 LINE CR1 699 chr6 14987230 14987299 (GTTTTT)n 486 + 14987230 14987299 0 2 10,14, 0,55, +,+, 532658 Simple_repeat Simple_repeat 699 chr6 15024754 15025187 GGLTR5A 375 + 15024754 15025187 0 2 227,190, 0,243, +,+, 532677 LTR ERVL 700 chr6 15162336 15162723 UCON64 323 - 15162336 15162723 0 2 162,173, 0,214, -,-, 532738 Unknown Unknown 700 chr6 15167931 15169577 CR1-C4 634 + 15167931 15169577 0 2 1124,519, 0,1127, +,+, 532742 LINE CR1 701 chr6 15334128 15334328 GGLTR7A 852 - 15334128 15334328 0 2 113,87, 0,113, -,-, 532802 LTR ERV1 702 chr6 15364358 15364440 (GCCG)n 332 + 15364358 15364440 0 2 16,29, 0,53, +,+, 532815 Simple_repeat Simple_repeat 702 chr6 15439979 15440515 CR1-Y2_Aves 143 + 15439979 15440515 0 2 128,318, 0,218, +,+, 532839 LINE CR1 703 chr6 15554403 15555403 CR1-X1 523 + 15554403 15555403 0 2 538,118, 0,882, +,+, 532868 LINE CR1 706 chr6 15873156 15874035 CR1-F2 569 + 15873156 15874035 0 2 394,485, 0,394, +,+, 532994 LINE CR1 709 chr6 16275991 16276208 CR1-C4 745 + 16275991 16276208 0 2 133,84, 0,133, +,+, 533151 LINE CR1 710 chr6 16398436 16400073 CR1-L3A_Croc 96 - 16398436 16400073 0 3 925,416,208, 0,951,1429, -,-,-, 533191 LINE CR1 710 chr6 16459232 16459605 CR1-C2 740 - 16459232 16459605 0 2 219,76, 0,297, -,-, 533217 LINE CR1 710 chr6 16505551 16506009 CR1-F2 603 - 16505551 16506009 0 2 296,162, 0,296, -,-, 533230 LINE CR1 711 chr6 16627727 16628263 TguLTR5e 347 + 16627727 16628263 0 2 278,136, 0,400, +,+, 533266 LTR ERVL 712 chr6 16659640 16665318 REP131 341 - 16659640 16665318 0 2 179,64, 0,5614, -,-, 533280 DNA? DNA? 712 chr6 16770012 16770619 CR1-F2 443 - 16770012 16770619 0 2 261,329, 0,278, -,-, 533309 LINE CR1 713 chr6 16869873 16870011 CR1-Y1_Aves 485 - 16869873 16870011 0 2 78,58, 0,80, -,-, 533346 LINE CR1 716 chr6 17240873 17240971 (TC)n 196 + 17240873 17240971 0 2 41,17, 0,81, +,+, 533558 Simple_repeat Simple_repeat 717 chr6 17325341 17328074 CR1-F2 364 + 17325341 17328074 0 2 24,79, 0,2654, +,+, 533614 LINE CR1 717 chr6 17332268 17332361 CR1-X2 610 + 17332268 17332361 0 2 23,24, 0,69, +,+, 533617 LINE CR1 717 chr6 17387926 17388029 (A)n 804 + 17387926 17388029 0 2 39,20, 0,83, +,+, 533657 Simple_repeat Simple_repeat 717 chr6 17402861 17404713 GGLTR7-int 617 + 17402861 17404713 0 4 569,507,56,64, 0,570,1720,1788, +,+,+,+, 533664 LTR ERV1 717 chr6 17414039 17415760 ENS1-int 504 + 17414039 17415760 0 3 101,162,234, 0,167,1487, +,+,+, 533668 LTR ERVL 717 chr6 17414349 17415538 GGLTR12B 412 + 17414349 17415538 0 2 502,687, 0,502, +,+, 533669 LTR ERVL 718 chr6 17472964 17473363 CR1-X1 538 - 17472964 17473363 0 2 233,166, 0,233, -,-, 533684 LINE CR1 718 chr6 17562142 17562483 CR1-D2 528 + 17562142 17562483 0 2 203,138, 0,203, +,+, 533720 LINE CR1 719 chr6 17574020 17574867 CR1-F2 618 + 17574020 17574867 0 2 98,74, 0,773, +,+, 533728 LINE CR1 719 chr6 17578092 17581307 CR1-F2 496 + 17578092 17581307 0 2 227,235, 0,2980, +,+, 533732 LINE CR1 719 chr6 17610772 17612241 CR1-Y4 301 + 17610772 17612241 0 4 227,450,204,203, 0,294,1062,1266, +,+,+,+, 533750 LINE CR1 719 chr6 17618339 17619619 CR1-C4 512 + 17618339 17619619 0 4 48,339,437,107, 0,48,387,1173, +,+,+,+, 533755 LINE CR1 720 chr6 17713199 17713698 CR1-D2 754 + 17713199 17713698 0 2 66,232, 0,267, +,+, 533807 LINE CR1 720 chr6 17718133 17719034 CR1-L3B_Croc 120 + 17718133 17719034 0 2 287,206, 0,695, +,+, 533811 LINE CR1 720 chr6 17776820 17777741 CR1-C 856 + 17776820 17777741 0 2 270,651, 0,270, +,+, 533838 LINE CR1 722 chr6 18015930 18017007 CR1-L3B_Croc 168 - 18015930 18017007 0 2 722,296, 0,781, -,-, 533925 LINE CR1 722 chr6 18019528 18020078 CR1-D2 578 + 18019528 18020078 0 2 159,391, 0,159, +,+, 533926 LINE CR1 723 chr6 18106889 18106951 A-rich 322 + 18106889 18106951 0 2 15,12, 0,50, +,+, 533959 Low_complexity Low_complexity 724 chr6 18239379 18239997 CR1-D2 627 - 18239379 18239997 0 2 302,274, 0,344, -,-, 534015 LINE CR1 725 chr6 18366683 18368637 CR1-C4 418 + 18366683 18368637 0 4 181,851,112,65, 0,181,1038,1889, +,+,+,+, 534071 LINE CR1 725 chr6 18367833 18368570 GGERV30_LTR 708 - 18367833 18368570 0 2 305,432, 0,305, -,-, 534073 LTR ERVL 725 chr6 18468036 18468104 (TTTG)n 408 + 18468036 18468104 0 2 12,31, 0,37, +,+, 534097 Simple_repeat Simple_repeat 727 chr6 18624312 18624673 GGERV22_LTR 628 + 18624312 18624673 0 2 245,85, 0,276, +,+, 534154 LTR ERVL 727 chr6 18730419 18731622 Mariner1_GG 659 - 18730419 18731622 0 2 607,594, 0,609, -,-, 534224 DNA TcMar-Mariner 729 chr6 18888792 18889971 MIR_Aves1 335 - 18888792 18889971 0 2 92,97, 0,1082, -,-, 534301 SINE MIR 732 chr6 19268663 19269510 CR1-C4 512 - 19268663 19269510 0 2 487,355, 0,492, -,-, 534507 LINE CR1 732 chr6 19354186 19355565 CR1-X2 510 + 19354186 19355565 0 2 985,377, 0,1002, +,+, 534545 LINE CR1 733 chr6 19462319 19468136 GGERV10_LTR 963 - 19462319 19468136 0 3 212,5384,220, 0,212,5597, -,-,-, 534576 LTR ERVL 733 chr6 19482554 19482843 GGLTR5B 246 + 19482554 19482843 0 2 161,103, 0,186, +,+, 534584 LTR ERVL 733 chr6 19511320 19512276 Char12Mar1_GG 616 - 19511320 19512276 0 2 170,243, 0,713, -,-, 534595 DNA hAT-Charlie 734 chr6 19544524 19554667 Char12Mar1_GG 492 - 19544524 19554667 0 2 547,66, 0,10077, -,-, 534609 DNA hAT-Charlie 735 chr6 19703638 19703896 REP131 0 + 19703638 19703896 0 2 118,108, 0,150, +,+, 534679 DNA? DNA? 735 chr6 19723931 19725221 CR1-Y1_Aves 109 - 19723931 19725221 0 2 164,1058, 0,232, -,-, 534691 LINE CR1 736 chr6 19840528 19842153 CR1-D2 518 - 19840528 19842153 0 2 1315,310, 0,1315, -,-, 534746 LINE CR1 737 chr6 20009481 20009815 CR1-X2 311 - 20009481 20009815 0 2 185,135, 0,199, -,-, 534816 LINE CR1 738 chr6 20127114 20127419 CR1-13_AMi 417 - 20127114 20127419 0 2 57,120, 0,185, -,-, 534861 LINE CR1 738 chr6 20168353 20168797 Char12Mar1_GG 631 - 20168353 20168797 0 2 304,140, 0,304, -,-, 534880 DNA hAT-Charlie 739 chr6 20278868 20279782 CR1-Y2_Aves 280 - 20278868 20279782 0 2 593,266, 0,648, -,-, 534925 LINE CR1 742 chr6 20701323 20701393 (GGC)n 530 + 20701323 20701393 0 2 15,6, 0,64, +,+, 535114 Simple_repeat Simple_repeat 743 chr6 20741763 20741849 (CCCCGC)n 520 + 20741763 20741849 0 2 14,43, 0,43, +,+, 535139 Simple_repeat Simple_repeat 743 chr6 20755473 20756885 CR1-D2 525 + 20755473 20756885 0 3 601,486,325, 0,601,1087, +,+,+, 535147 LINE CR1 744 chr6 20861123 20863198 REP131 336 - 20861123 20863198 0 2 76,187, 0,1888, -,-, 535199 DNA? DNA? 744 chr6 20951890 20952479 GGLTR5B 618 + 20951890 20952479 0 2 367,142, 0,447, +,+, 535240 LTR ERVL 745 chr6 21057514 21058133 REP131 145 - 21057514 21058133 0 2 163,100, 0,519, -,-, 535277 DNA? DNA? 747 chr6 21252435 21252487 (TATATA)n 556 + 21252435 21252487 0 2 8,11, 0,41, +,+, 535355 Simple_repeat Simple_repeat 748 chr6 21369654 21371624 CR1-L3B_Croc 179 - 21369654 21371624 0 2 290,329, 0,1641, -,-, 535426 LINE CR1 748 chr6 21431375 21431899 Char12Mar1_GG 484 - 21431375 21431899 0 2 389,123, 0,401, -,-, 535459 DNA hAT-Charlie 750 chr6 21686473 21686824 CR1-11_Crp 216 + 21686473 21686824 0 2 166,165, 0,186, +,+, 535584 LINE CR1 751 chr6 21828009 21828056 (TTGTT)n 630 + 21828009 21828056 0 2 10,6, 0,41, +,+, 535648 Simple_repeat Simple_repeat 752 chr6 21899409 21899897 CR1-11_Crp 198 + 21899409 21899897 0 2 116,117, 0,371, +,+, 535692 LINE CR1 754 chr6 22173778 22174479 CR1-L3B_Croc 288 - 22173778 22174479 0 2 328,100, 0,601, -,-, 535803 LINE CR1 755 chr6 22307952 22308078 (GCC)n 376 + 22307952 22308078 0 2 55,33, 0,93, +,+, 535872 Simple_repeat Simple_repeat 755 chr6 22355474 22355790 CR1-L3B_Croc 352 - 22355474 22355790 0 2 54,170, 0,146, -,-, 535889 LINE CR1 755 chr6 22386583 22386685 (GGTTG)n 510 + 22386583 22386685 0 2 6,30, 0,72, +,+, 535898 Simple_repeat Simple_repeat 756 chr6 22517494 22517569 (TCCC)n 526 + 22517494 22517569 0 2 6,19, 0,56, +,+, 535955 Simple_repeat Simple_repeat 756 chr6 22528973 22529102 (TGC)n 615 + 22528973 22529102 0 2 36,41, 0,88, +,+, 535971 Simple_repeat Simple_repeat 757 chr6 22648792 22648907 (GCG)n 370 + 22648792 22648907 0 2 27,52, 0,63, +,+, 536010 Simple_repeat Simple_repeat 758 chr6 22729679 22730819 CR1-L3A_Croc 210 - 22729679 22730819 0 2 741,312, 0,828, -,-, 536052 LINE CR1 759 chr6 22824734 22824846 CR1-Y2 166 + 22824734 22824846 0 2 13,43, 0,69, +,+, 536095 LINE CR1 759 chr6 22927377 22933468 GGERVK10-int 679 - 22927377 22933468 0 2 378,5713, 0,378, -,-, 536136 LTR ERVK 759 chr6 22934019 22934879 CR1-11_Crp 243 + 22934019 22934879 0 2 207,465, 0,395, +,+, 536137 LINE CR1 765 chr6 23676364 23677009 CR1-F2 487 - 23676364 23677009 0 2 83,88, 0,557, -,-, 536468 LINE CR1 770 chr6 24281368 24281472 (GCGCC)n 276 + 24281368 24281472 0 2 8,57, 0,47, +,+, 536674 Simple_repeat Simple_repeat 770 chr6 24312551 24312625 (TTTTAA)n 352 + 24312551 24312625 0 2 14,26, 0,48, +,+, 536683 Simple_repeat Simple_repeat 770 chr6 24336981 24337246 MER126 291 - 24336981 24337246 0 2 108,142, 0,123, -,-, 536695 DNA DNA 772 chr6 24517324 24518299 CR1-F2 447 - 24517324 24518299 0 2 796,179, 0,796, -,-, 536770 LINE CR1 773 chr6 24650990 24652163 CR1-D2 655 + 24650990 24652163 0 2 325,250, 0,923, +,+, 536826 LINE CR1 773 chr6 24746643 24746896 CR1-D 385 + 24746643 24746896 0 2 76,177, 0,76, +,+, 536879 LINE CR1 776 chr6 25083014 25083452 Char12Mar1_GG 551 - 25083014 25083452 0 2 238,197, 0,241, -,-, 537049 DNA hAT-Charlie 776 chr6 25144248 25145150 GGERVL-B-int 610 + 25144248 25145150 0 2 661,240, 0,662, +,+, 537075 LTR ERVL 777 chr6 25268321 25270415 OldhAT1 376 - 25268321 25270415 0 2 234,51, 0,2043, -,-, 537136 DNA hAT-Ac 777 chr6 25275308 25275756 CR1-C4 478 + 25275308 25275756 0 2 129,231, 0,217, +,+, 537141 LINE CR1 778 chr6 25422413 25423058 CR1-Y2_Aves 93 + 25422413 25423058 0 2 211,302, 0,343, +,+, 537202 LINE CR1 779 chr6 25453672 25455751 CR1-L3A_Croc 53 - 25453672 25455751 0 2 308,1651, 0,428, -,-, 537223 LINE CR1 780 chr6 25561027 25562404 CR1-L3B_Croc 126 - 25561027 25562404 0 2 248,875, 0,502, -,-, 537280 LINE CR1 780 chr6 25658802 25659656 CR1-D2 595 + 25658802 25659656 0 2 389,183, 0,671, +,+, 537333 LINE CR1 783 chr6 25961586 25961936 CR1-C4 620 + 25961586 25961936 0 2 198,152, 0,198, +,+, 537445 LINE CR1 784 chr6 26092817 26094244 CR1-L3B_Croc 155 + 26092817 26094244 0 3 432,390,124, 0,637,1303, +,+,+, 537492 LINE CR1 784 chr6 26173147 26173369 CR1-X1 492 - 26173147 26173369 0 2 80,108, 0,114, -,-, 537522 LINE CR1 786 chr6 26366310 26366726 CR1-X2 441 - 26366310 26366726 0 2 119,297, 0,119, -,-, 537612 LINE CR1 786 chr6 26395642 26396895 CR1-H 787 + 26395642 26396895 0 2 853,400, 0,853, +,+, 537627 LINE CR1 787 chr6 26502869 26503177 CR1-D2 593 + 26502869 26503177 0 2 155,153, 0,155, +,+, 537678 LINE CR1 790 chr6 26947085 26947590 L2-1_AMi 211 - 26947085 26947590 0 2 117,346, 0,159, -,-, 537839 LINE L2 791 chr6 27030174 27030812 L2-1_AMi 266 + 27030174 27030812 0 2 202,109, 0,529, +,+, 537885 LINE L2 791 chr6 27066249 27066320 (ACA)n 402 + 27066249 27066320 0 2 9,17, 0,54, +,+, 537916 Simple_repeat Simple_repeat 792 chr6 27134170 27134527 hAT6-N1_Croc 494 - 27134170 27134527 0 2 63,235, 0,122, -,-, 537973 DNA hAT-hAT6 792 chr6 27167446 27169216 CR1-Y2_Aves 186 + 27167446 27169216 0 2 773,997, 0,773, +,+, 537987 LINE CR1 793 chr6 27265074 27266867 CR1-L3B_Croc 285 - 27265074 27266867 0 3 396,127,324, 0,966,1469, -,-,-, 538072 LINE CR1 793 chr6 27291130 27291190 (CTTT)n 490 + 27291130 27291190 0 2 24,10, 0,50, +,+, 538085 Simple_repeat Simple_repeat 793 chr6 27371111 27371749 CR1-E 192 - 27371111 27371749 0 2 315,110, 0,528, -,-, 538141 LINE CR1 793 chr6 27379715 27380159 UCON1 309 + 27379715 27380159 0 2 330,97, 0,347, +,+, 538146 Unknown Unknown 794 chr6 27402558 27402774 CR1-D2 698 - 27402558 27402774 0 2 179,37, 0,179, -,-, 538166 LINE CR1 794 chr6 27446294 27446632 CR1-C4 658 + 27446294 27446632 0 2 41,297, 0,41, +,+, 538181 LINE CR1 797 chr6 27817454 27818090 CR1-Y2_Aves 418 - 27817454 27818090 0 2 474,162, 0,474, -,-, 538335 LINE CR1 797 chr6 27819239 27819771 CR1-Y2_Aves 128 - 27819239 27819771 0 2 272,225, 0,307, -,-, 538338 LINE CR1 797 chr6 27862819 27862938 A-rich 546 + 27862819 27862938 0 2 61,34, 0,85, +,+, 538359 Low_complexity Low_complexity 799 chr6 28124759 28125380 Char12Mar1_GG 480 - 28124759 28125380 0 2 42,41, 0,580, -,-, 538434 DNA hAT-Charlie 799 chr6 28152388 28158215 GGERV10_LTR 991 - 28152388 28158215 0 3 220,5385,221, 0,220,5606, -,-,-, 538447 LTR ERVL 800 chr6 28227648 28229918 Char12Mar1_GG 691 - 28227648 28229918 0 2 374,192, 0,2078, -,-, 538471 DNA hAT-Charlie 800 chr6 28230018 28230261 GGLTR3C1 455 + 28230018 28230261 0 2 98,137, 0,106, +,+, 538472 LTR ERVL 800 chr6 28238609 28239763 CR1-C4 560 + 28238609 28239763 0 2 533,614, 0,540, +,+, 538477 LINE CR1 801 chr6 28348515 28348994 CR1-L3A_Croc 181 - 28348515 28348994 0 2 119,127, 0,352, -,-, 538516 LINE CR1 801 chr6 28350476 28350701 CR1-Y2_Aves 297 - 28350476 28350701 0 2 126,72, 0,153, -,-, 538518 LINE CR1 802 chr6 28545132 28546176 CR1-11_Crp 156 - 28545132 28546176 0 2 242,473, 0,571, -,-, 538640 LINE CR1 803 chr6 28614002 28614283 UCON1 232 - 28614002 28614283 0 2 108,160, 0,121, -,-, 538675 Unknown Unknown 804 chr6 28766051 28766980 CR1-F2 559 - 28766051 28766980 0 2 262,180, 0,749, -,-, 538745 LINE CR1 804 chr6 28823299 28824044 CR1-L3B_Croc 219 - 28823299 28824044 0 2 221,239, 0,506, -,-, 538768 LINE CR1 808 chr6 29354024 29354442 Char12Mar1_GG 707 - 29354024 29354442 0 2 137,277, 0,141, -,-, 539057 DNA hAT-Charlie 809 chr6 29429746 29430482 CR1-F2 322 + 29429746 29430482 0 2 201,535, 0,201, +,+, 539099 LINE CR1 810 chr6 29519710 29519815 (TACATA)n 246 + 29519710 29519815 0 2 17,10, 0,95, +,+, 539140 Simple_repeat Simple_repeat 810 chr6 29574619 29575251 UCON1 260 + 29574619 29575251 0 2 129,332, 0,300, +,+, 539174 Unknown Unknown 811 chr6 29723377 29723744 CR1-C4 585 - 29723377 29723744 0 2 262,105, 0,262, -,-, 539244 LINE CR1 812 chr6 29825001 29825447 CR1-C2 711 + 29825001 29825447 0 2 137,39, 0,407, +,+, 539286 LINE CR1 813 chr6 29907296 29908714 CR1-D 702 + 29907296 29908714 0 2 565,853, 0,565, +,+, 539312 LINE CR1 814 chr6 30074029 30074538 CR1-Y2_Aves 240 - 30074029 30074538 0 2 241,264, 0,245, -,-, 539383 LINE CR1 815 chr6 30188946 30189268 CR1-Y4 529 - 30188946 30189268 0 2 76,246, 0,76, -,-, 539434 LINE CR1 818 chr6 30650857 30651387 GGLTR3F1 938 - 30650857 30651387 0 2 494,36, 0,494, -,-, 539613 LTR ERVL 818 chr6 30651387 30657196 GGLTR3F1 901 - 30651387 30657196 0 2 5314,494, 0,5315, -,-, 539614 LTR ERVL 819 chr6 30679941 30680370 CR1-C4 622 - 30679941 30680370 0 2 78,351, 0,78, -,-, 539623 LINE CR1 821 chr6 30995480 30996003 CR1-X1 543 - 30995480 30996003 0 2 125,398, 0,125, -,-, 539799 LINE CR1 822 chr6 31123155 31123432 CR1-D2 490 - 31123155 31123432 0 2 106,171, 0,106, -,-, 539862 LINE CR1 824 chr6 31348580 31349118 CR1-X2 290 - 31348580 31349118 0 2 159,326, 0,212, -,-, 539983 LINE CR1 824 chr6 31351824 31355187 CR1-X2 252 - 31351824 31355187 0 2 163,364, 0,2999, -,-, 539986 LINE CR1 824 chr6 31358264 31362620 CR1-X2 167 - 31358264 31362620 0 2 504,365, 0,3991, -,-, 539991 LINE CR1 824 chr6 31360121 31362241 CR1-X2 226 - 31360121 31362241 0 2 503,261, 0,1859, -,-, 539993 LINE CR1 824 chr6 31363838 31368189 CR1-X2 138 - 31363838 31368189 0 3 504,501,634, 0,1861,3717, -,-,-, 539995 LINE CR1 824 chr6 31400823 31401523 CR1-Y2_Aves 266 + 31400823 31401523 0 2 98,253, 0,447, +,+, 540007 LINE CR1 825 chr6 31474396 31476640 CR1-F2 726 + 31474396 31476640 0 2 1176,1068, 0,1176, +,+, 540040 LINE CR1 826 chr6 31714313 31716518 CR1-Y4 141 + 31714313 31716518 0 4 184,135,1164,596, 0,268,420,1609, +,+,+,+, 540179 LINE CR1 827 chr6 31720353 31722070 CR1-Y2 83 + 31720353 31722070 0 3 184,579,805, 0,268,912, +,+,+, 540182 LINE CR1 827 chr6 31722133 31722514 CR1-Y4 394 + 31722133 31722514 0 2 220,46, 0,335, +,+, 540184 LINE CR1 828 chr6 31884210 31884260 (TTTTTAA)n 488 + 31884210 31884260 0 2 9,8, 0,42, +,+, 540265 Simple_repeat Simple_repeat 828 chr6 31915676 31915823 CR1-Y3 798 - 31915676 31915823 0 2 84,36, 0,111, -,-, 540282 LINE CR1 828 chr6 31967195 31967744 CR1-F2 490 - 31967195 31967744 0 2 65,172, 0,377, -,-, 540317 LINE CR1 829 chr6 32041864 32041995 CR1-H 524 - 32041864 32041995 0 2 58,66, 0,65, -,-, 540350 LINE CR1 830 chr6 32205225 32205783 CR1-E 784 - 32205225 32205783 0 2 81,88, 0,470, -,-, 540445 LINE CR1 831 chr6 32329602 32329890 CR1-C4 588 + 32329602 32329890 0 2 249,39, 0,249, +,+, 540504 LINE CR1 831 chr6 32346993 32347267 CR1-Y4 590 - 32346993 32347267 0 2 12,28, 0,246, -,-, 540515 LINE CR1 832 chr6 32458787 32459231 CR1-F2 427 - 32458787 32459231 0 2 141,303, 0,141, -,-, 540575 LINE CR1 833 chr6 32576185 32576446 GGLTR5A 491 - 32576185 32576446 0 2 76,179, 0,82, -,-, 540623 LTR ERVL 833 chr6 32630547 32630650 CR1-C4 568 - 32630547 32630650 0 2 45,50, 0,53, -,-, 540655 LINE CR1 835 chr6 32781413 32782243 CR1-F2 555 - 32781413 32782243 0 2 223,254, 0,576, -,-, 540728 LINE CR1 837 chr6 33036149 33036697 CR1-C 775 + 33036149 33036697 0 2 421,127, 0,421, +,+, 540860 LINE CR1 837 chr6 33160244 33160635 CR1-E 704 - 33160244 33160635 0 2 312,79, 0,312, -,-, 540919 LINE CR1 839 chr6 33313169 33313486 CR1-F2 372 - 33313169 33313486 0 2 96,210, 0,107, -,-, 541020 LINE CR1 839 chr6 33336240 33337254 CR1-F2 631 + 33336240 33337254 0 3 753,193,68, 0,753,946, +,+,+, 541042 LINE CR1 839 chr6 33373009 33373321 CR1-C2 823 + 33373009 33373321 0 2 181,131, 0,181, +,+, 541063 LINE CR1 841 chr6 33657387 33657423 (TGTA)n 534 + 33657387 33657423 0 2 6,7, 0,29, +,+, 541233 Simple_repeat Simple_repeat 841 chr6 33660961 33661296 CR1-X1 540 - 33660961 33661296 0 2 169,112, 0,223, -,-, 541236 LINE CR1 842 chr6 33709525 33710454 CR1-F2 436 + 33709525 33710454 0 2 565,361, 0,568, +,+, 541258 LINE CR1 843 chr6 33831059 33833969 CR1-F0 214 - 33831059 33833969 0 2 316,146, 0,2764, -,-, 541344 LINE CR1 843 chr6 33874791 33875490 CR1-C2 220 + 33874791 33875490 0 2 130,100, 0,599, +,+, 541378 LINE CR1 843 chr6 33882457 33882868 CR1-Y4 566 + 33882457 33882868 0 2 265,146, 0,265, +,+, 541382 LINE CR1 844 chr6 33979253 33979906 ENS1-LTR 398 - 33979253 33979906 0 2 273,303, 0,350, -,-, 541429 LTR ERVL 845 chr6 34121808 34122579 CR1-F2 422 + 34121808 34122579 0 2 208,88, 0,683, +,+, 541487 LINE CR1 846 chr6 34248131 34248188 (TCTCTTT)n 444 + 34248131 34248188 0 2 10,28, 0,29, +,+, 541541 Simple_repeat Simple_repeat 846 chr6 34310386 34310446 (TGG)n 360 + 34310386 34310446 0 2 7,16, 0,44, +,+, 541583 Simple_repeat Simple_repeat 847 chr6 34375027 34375425 CR1-D2 646 + 34375027 34375425 0 2 274,124, 0,274, +,+, 541629 LINE CR1 848 chr6 34490063 34490706 GGLTR5B 503 + 34490063 34490706 0 2 36,222, 0,421, +,+, 541706 LTR ERVL 848 chr6 34579443 34579814 GGLTR4A 586 + 34579443 34579814 0 2 85,251, 0,120, +,+, 541767 LTR ERVL 848 chr6 34579900 34581958 GGERVL18-int 530 + 34579900 34581958 0 2 1260,784, 0,1274, +,+, 541769 LTR ERVL 849 chr6 34618722 34619011 CR1-B2 552 + 34618722 34619011 0 2 227,36, 0,253, +,+, 541789 LINE CR1 849 chr6 34654259 34655081 GGLTR5B 529 + 34654259 34655081 0 2 350,165, 0,657, +,+, 541816 LTR ERVL 849 chr6 34678534 34679827 CR1-C4 576 - 34678534 34679827 0 2 86,104, 0,1189, -,-, 541836 LINE CR1 850 chr6 34767367 34767988 CR1-B 922 - 34767367 34767988 0 2 357,264, 0,357, -,-, 541886 LINE CR1 850 chr6 34819721 34819784 (TGTATA)n 342 + 34819721 34819784 0 2 10,21, 0,42, +,+, 541922 Simple_repeat Simple_repeat 850 chr6 34851731 34852720 CR1-D2 534 + 34851731 34852720 0 2 672,317, 0,672, +,+, 541942 LINE CR1 852 chr6 35076582 35076921 CR1-B2 736 - 35076582 35076921 0 2 89,250, 0,89, -,-, 542041 LINE CR1 853 chr6 35151595 35153899 CR1-C3 578 - 35151595 35153899 0 2 112,2192, 0,112, -,-, 542080 LINE CR1 853 chr6 35203842 35204104 CR1-Y1_Aves 426 + 35203842 35204104 0 2 69,177, 0,85, +,+, 542101 LINE CR1 853 chr6 35216435 35217249 CR1-Y2_Aves 88 + 35216435 35217249 0 2 389,212, 0,602, +,+, 542104 LINE CR1 854 chr6 35274162 35274209 (TTTC)n 544 + 35274162 35274209 0 2 10,6, 0,41, +,+, 542129 Simple_repeat Simple_repeat 854 chr6 35316746 35317493 CR1-E 743 + 35316746 35317493 0 2 665,82, 0,665, +,+, 542155 LINE CR1 854 chr6 35320101 35323388 GGERV20_I-int 656 + 35320101 35323388 0 5 288,398,1301,1004,287, 0,297,695,1996,3000, +,+,+,+,+, 542160 LTR ERVL 854 chr6 35352444 35354432 CR1-D 684 + 35352444 35354432 0 2 657,973, 0,1015, +,+, 542178 LINE CR1 854 chr6 35374132 35374971 CR1-Y 645 + 35374132 35374971 0 2 156,614, 0,225, +,+, 542198 LINE CR1 854 chr6 35377860 35382509 CR1-C4 658 - 35377860 35382509 0 2 298,106, 0,4543, -,-, 542201 LINE CR1 855 chr6 35393010 35396458 CR1-X2 475 + 35393010 35396458 0 2 363,481, 0,2967, +,+, 542213 LINE CR1 855 chr6 35416205 35416689 TguLTR5e 254 - 35416205 35416689 0 2 96,257, 0,227, -,-, 542235 LTR ERVL 855 chr6 35418402 35418908 GGLTR5B 347 - 35418402 35418908 0 2 142,341, 0,165, -,-, 542236 LTR ERVL 855 chr6 35452060 35454075 CR1-C 589 - 35452060 35454075 0 2 826,418, 0,1597, -,-, 542254 LINE CR1 855 chr6 35456406 35458125 CR1-G 527 - 35456406 35458125 0 3 387,157,597, 0,704,1122, -,-,-, 542261 LINE CR1 585 chr6_NT_460833v1_random 9005 11164 CR1-C2 698 + 9005 11164 0 2 295,138, 0,2021, +,+, 542277 LINE CR1 585 chr6_NT_460833v1_random 15724 17866 CR1-C2 690 + 15724 17866 0 2 294,135, 0,2007, +,+, 542284 LINE CR1 585 chr6_NT_460833v1_random 24930 27082 CR1-C2 694 + 24930 27082 0 2 295,137, 0,2015, +,+, 542293 LINE CR1 585 chr6_NT_460833v1_random 31639 33847 CR1-C2 704 + 31639 33847 0 2 295,137, 0,2071, +,+, 542301 LINE CR1 585 chr6_NT_460833v1_random 38410 40618 CR1-C2 722 + 38410 40618 0 2 295,107, 0,2101, +,+, 542307 LINE CR1 585 chr6_NT_460833v1_random 45181 47389 CR1-C2 684 + 45181 47389 0 2 295,107, 0,2101, +,+, 542313 LINE CR1 585 chr6_NT_460833v1_random 51938 54148 CR1-C2 686 + 51938 54148 0 2 295,107, 0,2103, +,+, 542319 LINE CR1 585 chr6_NT_460833v1_random 56833 57698 CR1-C 675 + 56833 57698 0 2 356,405, 0,460, +,+, 542324 LINE CR1 585 chr6_NT_460834v1_random 7507 9995 GGLTR7-int 264 - 7507 9995 0 4 73,585,465,238, 0,141,1112,2250, -,-,-,-, 542333 LTR ERV1 585 chr6_NT_460834v1_random 20049 20379 GGERV10_LTR 703 + 20049 20379 0 2 66,160, 0,170, +,+, 542340 LTR ERVL 585 chr6_NT_460835v1_random 20670 24442 GGLTR7-int 240 - 20670 24442 0 6 97,589,60,460,238,339, 0,165,1013,1144,2277,3433, -,-,-,-,-,-, 542370 LTR ERV1 585 chr6_NT_460835v1_random 28358 31660 GGLTR10C1 911 - 28358 31660 0 3 191,2747,364, 0,191,2938, -,-,-, 542372 LTR ERVK 585 chr6_NT_460835v1_random 37622 39760 CR1-C2 624 + 37622 39760 0 2 292,138, 0,2000, +,+, 542379 LINE CR1 585 chr6_NT_460836v1_random 3764 4942 CR1-F2 517 - 3764 4942 0 2 99,1068, 0,110, -,-, 542389 LINE CR1 585 chr6_NT_460836v1_random 5016 7340 CR1-C2 673 + 5016 7340 0 2 291,133, 0,2191, +,+, 542390 LINE CR1 585 chr6_NT_460836v1_random 11503 13914 CR1-C2 701 + 11503 13914 0 2 293,105, 0,2306, +,+, 542393 LINE CR1 585 chr6_NT_460836v1_random 25304 28561 CR1-C2 661 + 25304 28561 0 2 295,105, 0,3152, +,+, 542403 LINE CR1 585 chr6_NT_460836v1_random 30829 31629 CR1-C 483 + 30829 31629 0 2 345,354, 0,446, +,+, 542407 LINE CR1 585 chr6_NT_460837v1_random 13258 15772 GGLTR7-int 213 - 13258 15772 0 4 97,588,591,238, 0,165,1012,2276, -,-,-,-, 542418 LTR ERV1 585 chr6_NT_460837v1_random 29052 29605 GGLTR12B 699 - 29052 29605 0 2 325,180, 0,373, -,-, 542429 LTR ERVL 585 chr6_NT_460837v1_random 32961 33088 A-rich 491 + 32961 33088 0 2 49,38, 0,89, +,+, 542433 Low_complexity Low_complexity 585 chr6_NT_460839v1_random 5219 6847 CR1-C4 516 + 5219 6847 0 4 52,362,396,265, 0,55,417,1363, +,+,+,+, 542461 LINE CR1 585 chr6_NT_460839v1_random 6032 6582 GGLTR4A 643 - 6032 6582 0 2 79,260, 0,290, -,-, 542462 LTR ERVL 585 chr6_NT_460842v1_random 12484 16253 GGLTR7-int 226 - 12484 16253 0 5 97,349,460,238,339, 0,285,1144,2277,3430, -,-,-,-,-, 542522 LTR ERV1 585 chr6_NT_460843v1_random 7780 8985 CR1-D2 723 + 7780 8985 0 2 437,430, 0,775, +,+, 542539 LINE CR1 585 chr6_NT_460843v1_random 14332 15432 GGERVL-A-int 297 - 14332 15432 0 3 109,242,529, 0,194,571, -,-,-, 542544 LTR ERVL 585 chr6_NT_460843v1_random 20451 20916 CR1-X2 376 + 20451 20916 0 2 236,158, 0,307, +,+, 542551 LINE CR1 585 chr6_NT_460849v1_random 522 964 GGLTR4A 574 + 522 964 0 2 250,75, 0,367, +,+, 542608 LTR ERVL 585 chr6_NT_460850v1_random 16358 18358 CR1-F 781 - 16358 18358 0 3 178,396,1414, 0,188,586, -,-,-, 542626 LINE CR1 585 chr6_NT_460851v1_random 1264 4495 CR1-C2 666 + 1264 4495 0 2 293,105, 0,3126, +,+, 542628 LINE CR1 585 chr6_NT_460851v1_random 6877 7746 CR1-C 684 + 6877 7746 0 2 358,405, 0,464, +,+, 542632 LINE CR1 585 chr6_NT_460853v1_random 9285 9604 CR1-F 896 - 9285 9604 0 2 181,138, 0,181, -,-, 542652 LINE CR1 585 chr6_NT_460853v1_random 15565 15869 CR1-F 768 - 15565 15869 0 2 177,127, 0,177, -,-, 542663 LINE CR1 585 chr6_NT_460854v1_random 4685 6039 CR1-Y 141 - 4685 6039 0 2 469,787, 0,567, -,-, 542670 LINE CR1 585 chr6_NT_460856v1_random 1155 1466 CR1-F 823 + 1155 1466 0 2 143,168, 0,143, +,+, 542680 LINE CR1 585 chr6_NT_460856v1_random 7422 7741 CR1-F 908 + 7422 7741 0 2 144,175, 0,144, +,+, 542691 LINE CR1 585 chr6_NT_460856v1_random 10474 13657 CR1-C2 643 - 10474 13657 0 2 30,295, 0,2888, -,-, 542695 LINE CR1 585 chr6_NT_460856v1_random 13732 14051 CR1-F 908 + 13732 14051 0 2 144,175, 0,144, +,+, 542699 LINE CR1 585 chr6_NT_460857v1_random 983 6237 CR1-F 378 + 983 6237 0 2 220,255, 0,4999, +,+, 542706 LINE CR1 585 chr6_NT_460859v1_random 9135 10531 CR1-Y 175 + 9135 10531 0 2 769,520, 0,876, +,+, 542724 LINE CR1 585 chr6_NT_460860v1_random 14639 15956 CR1-C4 513 + 14639 15956 0 4 51,344,414,150, 0,54,398,1167, +,+,+,+, 542737 LINE CR1 585 chr6_NT_460861v1_random 5124 5630 A-rich 84 + 5124 5630 0 2 62,367, 0,139, +,+, 542749 Low_complexity Low_complexity 585 chr6_NT_460864v1_random 5780 6099 CR1-F 908 - 5780 6099 0 2 181,138, 0,181, -,-, 542799 LINE CR1 585 chr6_NT_460864v1_random 12088 12407 CR1-F 903 - 12088 12407 0 2 181,138, 0,181, -,-, 542809 LINE CR1 585 chr6_NT_460870v1_random 4645 4964 CR1-F 908 - 4645 4964 0 2 181,138, 0,181, -,-, 542870 LINE CR1 585 chr6_NT_460873v1_random 5320 6568 CR1-L3A_Croc 176 - 5320 6568 0 2 388,500, 0,748, -,-, 542909 LINE CR1 585 chr6_NT_460874v1_random 3249 3799 CR1-D2 575 - 3249 3799 0 2 392,158, 0,392, -,-, 542915 LINE CR1 585 chr6_NT_460874v1_random 6323 7496 CR1-L3B_Croc 124 + 6323 7496 0 2 296,329, 0,844, +,+, 542917 LINE CR1 585 chr6_NT_460877v1_random 9053 12509 GGERV20_I-int 911 + 9053 12509 0 3 221,973,2256, 0,222,1200, +,+,+, 542936 LTR ERVL 585 chr6_NT_460878v1_random 3325 3546 CR1-C4 701 - 3325 3546 0 2 90,131, 0,90, -,-, 542938 LINE CR1 585 chr6_NT_460879v1_random 2673 2992 CR1-F 908 + 2673 2992 0 2 144,175, 0,144, +,+, 542944 LINE CR1 585 chr6_NT_460879v1_random 8917 9236 CR1-F 914 + 8917 9236 0 2 144,175, 0,144, +,+, 542953 LINE CR1 585 chr6_NT_460885v1_random 9211 9528 CR1-Y4 536 - 9211 9528 0 2 76,241, 0,76, -,-, 542985 LINE CR1 585 chr6_NT_460971v1_random 537 1858 CR1-H 653 - 537 1858 0 2 396,590, 0,731, -,-, 543282 LINE CR1 585 chr6_NT_460973v1_random 3130 3518 CR1-F0 487 - 3130 3518 0 2 165,197, 0,191, -,-, 543285 LINE CR1 585 chr6_NT_460974v1_random 4016 4870 Char12Mar1_GG 547 - 4016 4870 0 3 243,527,72, 0,243,782, -,-,-, 543290 DNA hAT-Charlie 585 chr6_NT_460981v1_random 3287 4108 GGLTR5B 524 + 3287 4108 0 2 352,165, 0,656, +,+, 543314 LTR ERVL 585 chr6_NT_460994v1_random 2211 4506 CR1-F 479 + 2211 4506 0 2 787,833, 0,1462, +,+, 543338 LINE CR1 585 chr6_NT_460998v1_random 1174 2564 CR1-C4 424 + 1174 2564 0 3 114,656,273, 0,114,1117, +,+,+, 543352 LINE CR1 585 chr6_NT_461003v1_random 2816 3342 GGLTR4A 486 - 2816 3342 0 2 116,248, 0,278, -,-, 543365 LTR ERVL 585 chr6_NT_461044v1_random 1693 2672 Mariner1_GG 492 - 1693 2672 0 2 734,243, 0,736, -,-, 543434 DNA TcMar-Mariner 585 chr6_NT_461052v1_random 1255 2183 CR1-D2 526 + 1255 2183 0 2 675,253, 0,675, +,+, 543446 LINE CR1 585 chr7 20182 21035 GGLTR7-int 769 - 20182 21035 0 3 355,263,213, 0,355,640, -,-,-, 543489 LTR ERV1 585 chr7 21273 25026 GGERV28_I-int 86 - 21273 25026 0 2 1994,1451, 0,2302, -,-, 543490 LTR ERVK 585 chr7 39329 40156 GGERV28_LTR 716 - 39329 40156 0 2 354,473, 0,354, -,-, 543496 LTR ERVK 585 chr7 41491 41682 A-rich 353 + 41491 41682 0 2 48,109, 0,82, +,+, 543498 Low_complexity Low_complexity 585 chr7 42888 43948 Sat-CR1_GG 194 - 42888 43948 0 2 657,208, 0,852, -,-, 543504 Satellite Satellite 586 chr7 210146 210444 Char12Mar1_GG 635 - 210146 210444 0 2 147,151, 0,147, -,-, 543553 DNA hAT-Charlie 588 chr7 458090 459381 CR1-D 708 + 458090 459381 0 2 502,788, 0,503, +,+, 543643 LINE CR1 588 chr7 506394 507747 CR1-F 903 - 506394 507747 0 2 747,606, 0,747, -,-, 543666 LINE CR1 589 chr7 546447 548409 CR1-F2 825 - 546447 548409 0 2 891,1068, 0,894, -,-, 543690 LINE CR1 589 chr7 600494 601395 Char12Mar1_GG 611 - 600494 601395 0 2 381,189, 0,712, -,-, 543728 DNA hAT-Charlie 590 chr7 696133 697101 TguLTR5e 430 + 696133 697101 0 3 79,60,139, 0,422,829, +,+,+, 543773 LTR ERVL 590 chr7 698428 700096 CR1-C4 397 + 698428 700096 0 2 150,265, 0,1403, +,+, 543776 LINE CR1 591 chr7 800855 801357 CR1-L3A_Croc 143 + 800855 801357 0 2 146,145, 0,357, +,+, 543820 LINE CR1 592 chr7 972632 975994 CR1-F2 347 - 972632 975994 0 2 60,197, 0,3165, -,-, 543877 LINE CR1 593 chr7 1132731 1133508 CR1-C4 559 + 1132731 1133508 0 3 217,184,348, 0,217,429, +,+,+, 543967 LINE CR1 593 chr7 1146514 1146904 CR1-C3 442 + 1146514 1146904 0 2 231,159, 0,231, +,+, 543971 LINE CR1 594 chr7 1232887 1233673 CR1-F 783 + 1232887 1233673 0 2 422,364, 0,422, +,+, 544029 LINE CR1 594 chr7 1251284 1251833 CR1-C4 556 - 1251284 1251833 0 2 84,465, 0,84, -,-, 544041 LINE CR1 597 chr7 1618792 1620211 CR1-C4 686 + 1618792 1620211 0 2 119,874, 0,545, +,+, 544199 LINE CR1 597 chr7 1625451 1625852 Char12Mar1_GG 651 - 1625451 1625852 0 2 207,148, 0,253, -,-, 544204 DNA hAT-Charlie 597 chr7 1643887 1644044 CR1-C4 608 + 1643887 1644044 0 2 91,66, 0,91, +,+, 544219 LINE CR1 597 chr7 1678731 1679022 CR1-C4 384 - 1678731 1679022 0 2 166,125, 0,166, -,-, 544232 LINE CR1 598 chr7 1724498 1725123 CR1-D2 659 + 1724498 1725123 0 2 42,583, 0,42, +,+, 544266 LINE CR1 599 chr7 1859061 1860117 CR1-L3A_Croc 475 - 1859061 1860117 0 2 513,55, 0,1001, -,-, 544320 LINE CR1 599 chr7 1948166 1948526 Char12Mar1_GG 728 - 1948166 1948526 0 2 109,251, 0,109, -,-, 544364 DNA hAT-Charlie 601 chr7 2101479 2103989 CR1-C3 617 - 2101479 2103989 0 3 266,221,71, 0,266,2439, -,-,-, 544419 LINE CR1 75 chr7 2222680 2229971 GGLTR4A 652 - 2222680 2229971 0 2 201,154, 0,7137, -,-, 544464 LTR ERVL 604 chr7 2603103 2603187 (CTTTTT)n 298 + 2603103 2603187 0 2 11,45, 0,39, +,+, 544599 Simple_repeat Simple_repeat 604 chr7 2616463 2617693 Mariner1_GG 629 - 2616463 2617693 0 2 1026,176, 0,1054, -,-, 544610 DNA TcMar-Mariner 605 chr7 2634256 2634692 GGLTR8B 272 - 2634256 2634692 0 2 184,252, 0,184, -,-, 544617 LTR ERVL 605 chr7 2729399 2730576 CR1-D 737 + 2729399 2730576 0 2 1036,141, 0,1036, +,+, 544654 LINE CR1 606 chr7 2829413 2829796 CR1-C4 464 - 2829413 2829796 0 2 159,224, 0,159, -,-, 544686 LINE CR1 606 chr7 2840182 2841051 Char12Mar1_GG 581 - 2840182 2841051 0 2 181,688, 0,181, -,-, 544688 DNA hAT-Charlie 608 chr7 3038539 3039272 CR1-3_Croc 209 - 3038539 3039272 0 2 161,140, 0,593, -,-, 544745 LINE CR1 608 chr7 3044678 3044980 GGLTR7A 907 + 3044678 3044980 0 2 252,50, 0,252, +,+, 544749 LTR ERV1 608 chr7 3063688 3066341 (TTCCTT)n 510 + 3063688 3066341 0 2 11,62, 0,2591, +,+, 544754 Simple_repeat Simple_repeat 609 chr7 3152218 3152787 CR1-C4 430 - 3152218 3152787 0 2 307,262, 0,307, -,-, 544789 LINE CR1 609 chr7 3232984 3233533 CR1-X2 555 - 3232984 3233533 0 2 111,438, 0,111, -,-, 544810 LINE CR1 611 chr7 3501395 3504275 CR1-C4 620 - 3501395 3504275 0 2 135,48, 0,2832, -,-, 544901 LINE CR1 611 chr7 3506565 3506873 CR1-D2 575 - 3506565 3506873 0 2 134,174, 0,134, -,-, 544904 LINE CR1 613 chr7 3763066 3763127 (TTCCCCC)n 452 + 3763066 3763127 0 2 17,20, 0,41, +,+, 545025 Simple_repeat Simple_repeat 614 chr7 3925690 3926823 CR1-D2 545 - 3925690 3926823 0 2 630,503, 0,630, -,-, 545086 LINE CR1 615 chr7 4031325 4031471 CR1-D2 751 - 4031325 4031471 0 2 82,55, 0,91, -,-, 545117 LINE CR1 615 chr7 4033252 4038156 CR1-F2 592 - 4033252 4038156 0 2 138,142, 0,4762, -,-, 545119 LINE CR1 615 chr7 4061054 4061434 Char12Mar1_GG 747 - 4061054 4061434 0 2 346,31, 0,349, -,-, 545126 DNA hAT-Charlie 616 chr7 4093197 4094035 CR1-11_Crp 151 - 4093197 4094035 0 2 244,363, 0,475, -,-, 545138 LINE CR1 616 chr7 4138293 4138497 GGLTR5B 636 + 4138293 4138497 0 2 143,59, 0,145, +,+, 545149 LTR ERVL 617 chr7 4194742 4198578 GGERVL18-int 401 + 4194742 4198578 0 2 974,2862, 0,974, +,+, 545179 LTR ERVL 619 chr7 4478239 4478823 CR1-C4 611 + 4478239 4478823 0 2 282,67, 0,517, +,+, 545268 LINE CR1 620 chr7 4593646 4594409 CR1-Y4 742 - 4593646 4594409 0 2 40,723, 0,40, -,-, 545337 LINE CR1 620 chr7 4599910 4600585 CR1-Y4 476 - 4599910 4600585 0 2 254,421, 0,254, -,-, 545341 LINE CR1 622 chr7 4854816 4854996 CR1-C4 573 + 4854816 4854996 0 2 70,110, 0,70, +,+, 545435 LINE CR1 623 chr7 5061179 5061828 CR1-H2 494 - 5061179 5061828 0 2 88,80, 0,569, -,-, 545520 LINE CR1 623 chr7 5080697 5081223 CR1-D2 621 - 5080697 5081223 0 3 276,170,80, 0,276,446, -,-,-, 545530 LINE CR1 624 chr7 5161095 5161430 CR1-13_AMi 255 - 5161095 5161430 0 2 125,134, 0,201, -,-, 545564 LINE CR1 624 chr7 5169146 5171365 CR1-C4 317 + 5169146 5171365 0 2 258,237, 0,1982, +,+, 545575 LINE CR1 625 chr7 5261338 5263466 CR1-D 748 - 5261338 5263466 0 2 186,1942, 0,186, -,-, 545644 LINE CR1 625 chr7 5284034 5284134 A-rich 350 + 5284034 5284134 0 2 39,38, 0,62, +,+, 545658 Low_complexity Low_complexity 626 chr7 5466195 5467086 CR1-C4 634 - 5466195 5467086 0 2 79,810, 0,81, -,-, 545739 LINE CR1 626 chr7 5467788 5467973 CR1-Y1_Aves 398 - 5467788 5467973 0 2 104,81, 0,104, -,-, 545741 LINE CR1 626 chr7 5485865 5488535 CR1-F2 279 - 5485865 5488535 0 2 125,177, 0,2493, -,-, 545748 LINE CR1 626 chr7 5485992 5487683 CR1-F2 530 - 5485992 5487683 0 2 69,123, 0,1568, -,-, 545749 LINE CR1 626 chr7 5501970 5504187 CR1-C4 579 - 5501970 5504187 0 3 127,290,1437, 0,127,780, -,-,-, 545762 LINE CR1 627 chr7 5525747 5527259 CR1-X2 259 - 5525747 5527259 0 3 120,789,520, 0,120,992, -,-,-, 545770 LINE CR1 627 chr7 5544168 5545866 CR1-C4 615 + 5544168 5545866 0 2 446,1252, 0,446, +,+, 545777 LINE CR1 627 chr7 5561117 5561784 CR1-D2 269 + 5561117 5561784 0 2 221,446, 0,221, +,+, 545793 LINE CR1 627 chr7 5632170 5632494 CR1-Y1_Aves 536 + 5632170 5632494 0 2 100,96, 0,228, +,+, 545834 LINE CR1 628 chr7 5642145 5644438 GGERV20_I-int 443 + 5642145 5644438 0 4 1242,375,329,313, 0,1276,1651,1980, +,+,+,+, 545843 LTR ERVL 628 chr7 5725997 5726779 CR1-C4 675 - 5725997 5726779 0 2 234,548, 0,234, -,-, 545891 LINE CR1 628 chr7 5761492 5762313 CR1-E 480 + 5761492 5762313 0 2 260,561, 0,260, +,+, 545909 LINE CR1 629 chr7 5799427 5800732 CR1-D2 676 + 5799427 5800732 0 2 140,45, 0,1260, +,+, 545933 LINE CR1 629 chr7 5831117 5838792 GGERV28_LTR 781 + 5831117 5838792 0 3 411,6787,477, 0,411,7198, +,+,+, 545950 LTR ERVK 629 chr7 5842660 5844571 CR1-D2 412 + 5842660 5844571 0 2 416,501, 0,1410, +,+, 545951 LINE CR1 629 chr7 5866605 5866865 CR1-X2 440 + 5866605 5866865 0 2 82,165, 0,95, +,+, 545969 LINE CR1 629 chr7 5883854 5884101 CR1-D2 526 + 5883854 5884101 0 2 159,88, 0,159, +,+, 545977 LINE CR1 630 chr7 5908674 5911635 CR1-C3 638 - 5908674 5911635 0 2 99,60, 0,2901, -,-, 545986 LINE CR1 630 chr7 5964630 5964710 (TTTTCT)n 384 + 5964630 5964710 0 2 22,16, 0,64, +,+, 546018 Simple_repeat Simple_repeat 630 chr7 5970261 5970618 (CCTCT)n 972 + 5970261 5970618 0 2 219,79, 0,278, +,+, 546024 Simple_repeat Simple_repeat 630 chr7 5995105 5996991 CR1-F2 323 - 5995105 5996991 0 2 231,234, 0,1652, -,-, 546036 LINE CR1 631 chr7 6037725 6038065 CR1-Y1_Aves 617 - 6037725 6038065 0 2 58,282, 0,58, -,-, 546066 LINE CR1 631 chr7 6159478 6159984 CR1-F2 430 + 6159478 6159984 0 2 169,102, 0,404, +,+, 546139 LINE CR1 632 chr7 6217407 6220010 CR1-Y 522 - 6217407 6220010 0 2 1630,970, 0,1633, -,-, 546179 LINE CR1 632 chr7 6239045 6240524 CR1-Y2_Aves 278 + 6239045 6240524 0 4 636,114,439,263, 0,648,777,1216, +,+,+,+, 546185 LINE CR1 633 chr7 6387921 6388277 CR1-X2 308 + 6387921 6388277 0 2 155,201, 0,155, +,+, 546251 LINE CR1 633 chr7 6399834 6400223 CR1-X1 417 + 6399834 6400223 0 2 166,223, 0,166, +,+, 546261 LINE CR1 634 chr7 6464851 6465085 OldhAT1 354 - 6464851 6465085 0 2 120,83, 0,151, -,-, 546295 DNA hAT-Ac 634 chr7 6527296 6528896 CR1-X2 640 + 6527296 6528896 0 2 230,83, 0,1517, +,+, 546331 LINE CR1 634 chr7 6539031 6539314 CR1-X1 677 + 6539031 6539314 0 2 68,215, 0,68, +,+, 546337 LINE CR1 634 chr7 6543126 6543190 A-rich 439 + 6543126 6543190 0 2 32,32, 0,32, +,+, 546339 Low_complexity Low_complexity 635 chr7 6563767 6564118 TguLTR5e 152 - 6563767 6564118 0 2 151,157, 0,194, -,-, 546350 LTR ERVL 635 chr7 6571537 6572401 CR1-Y2_Aves 276 - 6571537 6572401 0 2 647,216, 0,648, -,-, 546357 LINE CR1 635 chr7 6667178 6667827 CR1-F2 502 + 6667178 6667827 0 2 245,404, 0,245, +,+, 546400 LINE CR1 635 chr7 6673962 6674358 CR1-Y4 512 + 6673962 6674358 0 2 246,150, 0,246, +,+, 546405 LINE CR1 636 chr7 6749951 6750539 CR1-D 685 + 6749951 6750539 0 3 101,259,228, 0,101,360, +,+,+, 546446 LINE CR1 637 chr7 6832626 6833600 CR1-D2 522 - 6832626 6833600 0 2 341,633, 0,341, -,-, 546508 LINE CR1 637 chr7 6835163 6837621 CR1-F2 224 - 6835163 6837621 0 2 574,210, 0,2248, -,-, 546513 LINE CR1 637 chr7 6838453 6839213 CR1-Y1_Aves 535 - 6838453 6839213 0 2 60,137, 0,623, -,-, 546520 LINE CR1 637 chr7 6879131 6880783 CR1-X1 483 - 6879131 6880783 0 2 199,396, 0,1256, -,-, 546567 LINE CR1 637 chr7 6883038 6884324 CR1-F2 546 - 6883038 6884324 0 2 294,992, 0,294, -,-, 546569 LINE CR1 637 chr7 6890661 6891358 GGERVL-B-int 263 - 6890661 6891358 0 2 360,337, 0,360, -,-, 546574 LTR ERVL 637 chr7 6891375 6891641 Charlie12_GG 505 - 6891375 6891641 0 2 98,164, 0,102, -,-, 546575 DNA hAT-Charlie 637 chr7 6892104 6893908 GGERVL-C-int 312 + 6892104 6893908 0 4 159,204,264,120, 0,842,1419,1684, +,+,+,+, 546578 LTR ERVL 638 chr7 7014608 7014957 CR1-X2 217 - 7014608 7014957 0 2 143,206, 0,143, -,-, 546636 LINE CR1 638 chr7 7050723 7051433 Charlie12_GG 679 - 7050723 7051433 0 2 649,61, 0,649, -,-, 546655 DNA hAT-Charlie 638 chr7 7060345 7061066 GGLTR8B 537 + 7060345 7061066 0 2 197,524, 0,197, +,+, 546660 LTR ERVL 639 chr7 7090082 7091510 CR1-C2 832 + 7090082 7091510 0 2 520,908, 0,520, +,+, 546680 LINE CR1 639 chr7 7136328 7136653 GGERV10_LTR 676 + 7136328 7136653 0 2 62,160, 0,165, +,+, 546713 LTR ERVL 639 chr7 7183277 7183559 GGLTR3D 644 + 7183277 7183559 0 2 66,207, 0,75, +,+, 546738 LTR ERVL 639 chr7 7183848 7185576 CR1-Y2 392 + 7183848 7185576 0 2 69,161, 0,1567, +,+, 546739 LINE CR1 640 chr7 7209302 7212193 CR1-D2 468 - 7209302 7212193 0 3 295,167,497, 0,2227,2394, -,-,-, 546751 LINE CR1 640 chr7 7260596 7264404 CR1-D 448 - 7260596 7264404 0 2 132,310, 0,3498, -,-, 546772 LINE CR1 640 chr7 7297021 7299696 GGLTR11-int 452 - 7297021 7299696 0 2 403,332, 0,2343, -,-, 546794 LTR ERV1 640 chr7 7297424 7299370 GGERVL-B-int 769 + 7297424 7299370 0 2 474,1470, 0,476, +,+, 546795 LTR ERVL 640 chr7 7302326 7303126 CR1-E 615 + 7302326 7303126 0 2 479,76, 0,724, +,+, 546797 LINE CR1 640 chr7 7333168 7333484 GGXHOI 298 . 7333168 7333484 0 2 154,143, 0,173, +,-, 546824 Satellite W-chromosome 640 chr7 7333364 7333893 Sat-CR1_GG 132 - 7333364 7333893 0 2 264,72, 0,457, -,-, 546825 Satellite Satellite 640 chr7 7335057 7335371 GGXHOI 292 . 7335057 7335371 0 2 152,143, 0,171, +,-, 546829 Satellite W-chromosome 640 chr7 7335258 7335771 Sat-CR1_GG 184 - 7335258 7335771 0 2 255,65, 0,448, -,-, 546830 Satellite Satellite 641 chr7 7340105 7340420 GGXHOI 297 . 7340105 7340420 0 2 153,143, 0,172, +,-, 546840 Satellite W-chromosome 644 chr7 7845049 7845551 Sat-CR1_GG 178 - 7845049 7845551 0 2 257,52, 0,450, -,-, 546851 Satellite Satellite 644 chr7 7846938 7847453 Sat-CR1_GG 200 - 7846938 7847453 0 2 257,65, 0,450, -,-, 546856 Satellite Satellite 645 chr7 7876323 7876962 CR1-H2 660 - 7876323 7876962 0 2 90,266, 0,373, -,-, 546865 LINE CR1 645 chr7 7940897 7942136 CR1-F2 359 - 7940897 7942136 0 2 586,629, 0,610, -,-, 546894 LINE CR1 647 chr7 8146686 8147441 CR1-Y2_Aves 293 - 8146686 8147441 0 2 240,479, 0,276, -,-, 546982 LINE CR1 647 chr7 8171201 8174878 CR1-H 869 + 8171201 8174878 0 2 284,3393, 0,284, +,+, 546995 LINE CR1 647 chr7 8194788 8201686 GGLTR11-int 668 - 8194788 8201686 0 5 429,2130,1733,2208,355, 0,457,2597,4334,6543, -,-,-,-,-, 547003 LTR ERV1 647 chr7 8201689 8202326 GGERVL18-int 555 - 8201689 8202326 0 2 408,225, 0,412, -,-, 547004 LTR ERVL 647 chr7 8213860 8214781 CR1-C4 618 - 8213860 8214781 0 2 516,404, 0,517, -,-, 547012 LINE CR1 648 chr7 8287991 8288104 GGLTR5B 543 + 8287991 8288104 0 2 68,45, 0,68, +,+, 547037 LTR ERVL 648 chr7 8317761 8319363 CR1-L3A_Croc 189 - 8317761 8319363 0 3 105,190,399, 0,959,1203, -,-,-, 547046 LINE CR1 648 chr7 8318396 8318720 GGERV10_LTR 588 + 8318396 8318720 0 2 60,163, 0,161, +,+, 547048 LTR ERVL 648 chr7 8341842 8342303 UCON84 248 + 8341842 8342303 0 2 97,183, 0,278, +,+, 547060 Unknown Unknown 649 chr7 8390633 8390858 UCON29 262 + 8390633 8390858 0 2 160,27, 0,198, +,+, 547089 DNA Kolobok 649 chr7 8395476 8396881 CR1-D2 558 + 8395476 8396881 0 2 1077,328, 0,1077, +,+, 547093 LINE CR1 649 chr7 8403576 8406215 GGERVL-A-int 747 + 8403576 8406215 0 3 58,1841,739, 0,59,1900, +,+,+, 547099 LTR ERVL 649 chr7 8440309 8442314 Mariner1_GG 601 - 8440309 8442314 0 3 475,224,376, 0,1405,1629, -,-,-, 547111 DNA TcMar-Mariner 649 chr7 8440786 8441714 ENS1B-LTR 336 - 8440786 8441714 0 2 415,368, 0,560, -,-, 547112 LTR ERVL 649 chr7 8483614 8484342 CR1-D2 580 + 8483614 8484342 0 2 565,163, 0,565, +,+, 547129 LINE CR1 649 chr7 8487678 8488391 CR1-F2 621 - 8487678 8488391 0 2 217,495, 0,218, -,-, 547132 LINE CR1 649 chr7 8505707 8508790 CR1-C 860 - 8505707 8508790 0 2 1270,1765, 0,1318, -,-, 547137 LINE CR1 650 chr7 8641883 8648050 GGERVL-A-int 856 - 8641883 8648050 0 3 527,43,5553, 0,527,614, -,-,-, 547218 LTR ERVL 651 chr7 8688164 8688227 GA-rich 374 + 8688164 8688227 0 2 14,24, 0,39, +,+, 547245 Low_complexity Low_complexity 651 chr7 8695291 8696470 CR1-E 646 + 8695291 8696470 0 2 227,415, 0,764, +,+, 547249 LINE CR1 651 chr7 8740066 8740331 CR1-Y4 617 - 8740066 8740331 0 2 146,109, 0,156, -,-, 547271 LINE CR1 651 chr7 8763036 8764516 CR1-Y4 552 + 8763036 8764516 0 2 69,594, 0,886, +,+, 547278 LINE CR1 651 chr7 8774109 8774354 (AT)n 390 + 8774109 8774354 0 2 133,70, 0,175, +,+, 547287 Simple_repeat Simple_repeat 653 chr7 9005701 9007082 GGLTR7B 706 - 9005701 9007082 0 2 244,278, 0,1103, -,-, 547403 LTR ERV1 653 chr7 9005945 9006797 GGLTR12A 833 - 9005945 9006797 0 2 210,622, 0,230, -,-, 547404 LTR ERVL 655 chr7 9198451 9200295 CR1-C3 626 + 9198451 9200295 0 2 103,1203, 0,641, +,+, 547514 LINE CR1 655 chr7 9211477 9212418 CR1-C4 591 - 9211477 9212418 0 2 701,240, 0,701, -,-, 547522 LINE CR1 655 chr7 9244438 9244852 GGLTR5B 623 - 9244438 9244852 0 2 164,250, 0,164, -,-, 547537 LTR ERVL 655 chr7 9258029 9259078 GGLTR3A 875 + 9258029 9259078 0 2 740,309, 0,740, +,+, 547547 LTR ERVL 655 chr7 9270569 9271183 CR1-E 614 - 9270569 9271183 0 2 128,486, 0,128, -,-, 547553 LINE CR1 656 chr7 9393699 9394051 Char12Mar1_GG 611 - 9393699 9394051 0 2 228,124, 0,228, -,-, 547612 DNA hAT-Charlie 656 chr7 9435462 9435619 Char12Mar1_GG 590 - 9435462 9435619 0 2 49,93, 0,64, -,-, 547637 DNA hAT-Charlie 657 chr7 9441949 9449062 GGERVL18-int 697 - 9441949 9449062 0 4 323,41,5190,327, 0,323,1581,6786, -,-,-,-, 547641 LTR ERVL 657 chr7 9468356 9468436 (TCCTC)n 416 + 9468356 9468436 0 2 37,17, 0,63, +,+, 547648 Simple_repeat Simple_repeat 657 chr7 9513029 9513933 CR1-F2 515 + 9513029 9513933 0 2 547,303, 0,601, +,+, 547673 LINE CR1 657 chr7 9514478 9515088 ENS1B-LTR 824 - 9514478 9515088 0 2 309,299, 0,311, -,-, 547675 LTR ERVL 658 chr7 9685653 9690764 GGLTR7-int 602 + 9685653 9690764 0 7 261,388,215,2844,246,81,355, 0,261,812,1033,4421,4667,4756, +,+,+,+,+,+,+, 547763 LTR ERV1 659 chr7 9702148 9702421 GGLTR5A 375 + 9702148 9702421 0 2 129,138, 0,135, +,+, 547771 LTR ERVL 659 chr7 9808497 9809239 CR1-Y4 389 + 9808497 9809239 0 2 18,162, 0,580, +,+, 547842 LINE CR1 660 chr7 9907357 9907788 CR1-Y2_Aves 290 - 9907357 9907788 0 2 315,108, 0,323, -,-, 547881 LINE CR1 663 chr7 10310550 10311326 CR1-C3 492 - 10310550 10311326 0 2 619,157, 0,619, -,-, 548028 LINE CR1 666 chr7 10722432 10722493 A-rich 386 + 10722432 10722493 0 2 21,16, 0,45, +,+, 548147 Low_complexity Low_complexity 666 chr7 10740073 10741522 CR1-L3A_Croc 189 + 10740073 10741522 0 2 703,581, 0,868, +,+, 548160 LINE CR1 669 chr7 11044070 11044494 CR1-Y4 323 + 11044070 11044494 0 2 225,199, 0,225, +,+, 548281 LINE CR1 670 chr7 11167220 11167963 CR1-C4 654 - 11167220 11167963 0 2 429,314, 0,429, -,-, 548329 LINE CR1 670 chr7 11256783 11257012 GGLTR5B 346 - 11256783 11257012 0 2 19,87, 0,142, -,-, 548365 LTR ERVL 671 chr7 11335918 11336643 CR1-Y4 402 + 11335918 11336643 0 2 186,539, 0,186, +,+, 548400 LINE CR1 671 chr7 11372992 11374306 CR1-D2 633 - 11372992 11374306 0 2 743,570, 0,744, -,-, 548421 LINE CR1 676 chr7 12012657 12013324 GGLTR9 713 + 12012657 12013324 0 2 272,84, 0,583, +,+, 548665 LTR ERVL 677 chr7 12111655 12112440 CR1-F2 453 + 12111655 12112440 0 2 598,77, 0,708, +,+, 548698 LINE CR1 678 chr7 12200500 12201758 CR1-H 778 - 12200500 12201758 0 2 1006,252, 0,1006, -,-, 548730 LINE CR1 678 chr7 12212020 12213597 CR1-Y2_Aves 219 - 12212020 12213597 0 2 716,83, 0,1494, -,-, 548733 LINE CR1 679 chr7 12428022 12428580 CR1-X2 545 + 12428022 12428580 0 2 290,268, 0,290, +,+, 548813 LINE CR1 680 chr7 12560850 12561922 Mariner1_GG 623 - 12560850 12561922 0 2 817,255, 0,817, -,-, 548874 DNA TcMar-Mariner 680 chr7 12578334 12578654 CR1-Y4 731 - 12578334 12578654 0 2 252,44, 0,276, -,-, 548885 LINE CR1 682 chr7 12798485 12798817 CR1-F2 493 - 12798485 12798817 0 2 228,68, 0,264, -,-, 548968 LINE CR1 683 chr7 12885479 12887576 UCON28a 230 - 12885479 12887576 0 2 380,208, 0,1889, -,-, 548994 Unknown Unknown 683 chr7 12968647 12968951 OldhAT1 473 - 12968647 12968951 0 2 84,84, 0,220, -,-, 549027 DNA hAT-Ac 684 chr7 13021318 13022383 CR1-L3A_Croc 241 + 13021318 13022383 0 3 137,155,102, 0,555,963, +,+,+, 549050 LINE CR1 684 chr7 13073832 13074204 CR1-C4 501 + 13073832 13074204 0 2 71,301, 0,71, +,+, 549063 LINE CR1 685 chr7 13165709 13166101 TguLTR5d 387 + 13165709 13166101 0 2 25,148, 0,244, +,+, 549094 LTR ERVL 85 chr7 13237610 13238736 CR1-L3B_Croc 229 - 13237610 13238736 0 2 229,642, 0,484, -,-, 549121 LINE CR1 688 chr7 13511241 13511710 CR1-F2 410 + 13511241 13511710 0 2 121,348, 0,121, +,+, 549252 LINE CR1 688 chr7 13584186 13584987 CR1-F2 466 + 13584186 13584987 0 2 527,274, 0,527, +,+, 549282 LINE CR1 688 chr7 13608156 13608287 CR1-F2 654 - 13608156 13608287 0 2 77,54, 0,77, -,-, 549297 LINE CR1 689 chr7 13640652 13640710 (TCTCTC)n 540 + 13640652 13640710 0 2 9,23, 0,35, +,+, 549313 Simple_repeat Simple_repeat 691 chr7 13973796 13974424 CR1-Y2 414 + 13973796 13974424 0 2 102,59, 0,569, +,+, 549401 LINE CR1 691 chr7 13989809 13990706 Mariner1_GG 512 - 13989809 13990706 0 2 531,366, 0,531, -,-, 549409 DNA TcMar-Mariner 692 chr7 14092554 14093611 CR1-Y3 782 + 14092554 14093611 0 2 512,44, 0,1013, +,+, 549463 LINE CR1 693 chr7 14156940 14157632 CR1-F 533 - 14156940 14157632 0 2 218,474, 0,218, -,-, 549501 LINE CR1 693 chr7 14269608 14271110 CR1-F2 389 - 14269608 14271110 0 3 652,84,300, 0,652,1202, -,-,-, 549552 LINE CR1 694 chr7 14309584 14310104 GA-rich 200 + 14309584 14310104 0 2 12,169, 0,351, +,+, 549567 Low_complexity Low_complexity 695 chr7 14534290 14535036 CR1-L3B_Croc 396 - 14534290 14535036 0 2 70,291, 0,455, -,-, 549689 LINE CR1 698 chr7 14916619 14917618 CR1-D2 473 - 14916619 14917618 0 2 372,627, 0,372, -,-, 549854 LINE CR1 700 chr7 15183076 15183425 CR1-Y2_Aves 411 - 15183076 15183425 0 2 107,176, 0,173, -,-, 549973 LINE CR1 702 chr7 15456404 15457835 CR1-D 751 - 15456404 15457835 0 2 783,646, 0,785, -,-, 550067 LINE CR1 704 chr7 15604014 15604069 (TTATATA)n 428 + 15604014 15604069 0 2 14,7, 0,48, +,+, 550132 Simple_repeat Simple_repeat 704 chr7 15651022 15652567 CR1-X2 459 - 15651022 15652567 0 3 650,227,622, 0,658,923, -,-,-, 550147 LINE CR1 705 chr7 15763660 15764899 CR1-Y4 527 + 15763660 15764899 0 2 293,272, 0,967, +,+, 550192 LINE CR1 706 chr7 15934789 15935162 CR1-Y4 625 - 15934789 15935162 0 2 109,263, 0,110, -,-, 550269 LINE CR1 706 chr7 15944174 15944763 CR1-Y1_Aves 304 + 15944174 15944763 0 2 111,478, 0,111, +,+, 550276 LINE CR1 708 chr7 16150679 16150744 A-rich 372 + 16150679 16150744 0 2 20,18, 0,47, +,+, 550369 Low_complexity Low_complexity 708 chr7 16240674 16241729 CR1-Y2_Aves 243 + 16240674 16241729 0 3 515,335,123, 0,525,932, +,+,+, 550410 LINE CR1 709 chr7 16302729 16303821 GGERVL18-int 500 + 16302729 16303821 0 2 802,288, 0,804, +,+, 550423 LTR ERVL 709 chr7 16359407 16359540 (TTTTCT)n 278 + 16359407 16359540 0 2 68,12, 0,121, +,+, 550469 Simple_repeat Simple_repeat 709 chr7 16370877 16370927 (TTTC)n 418 + 16370877 16370927 0 2 16,10, 0,40, +,+, 550496 Simple_repeat Simple_repeat 710 chr7 16456380 16457020 CR1-D 577 - 16456380 16457020 0 2 116,112, 0,528, -,-, 550553 LINE CR1 710 chr7 16490261 16490507 CR1-X1 349 + 16490261 16490507 0 2 106,137, 0,109, +,+, 550567 LINE CR1 712 chr7 16769780 16773354 CR1-C4 753 + 16769780 16773354 0 2 99,63, 0,3511, +,+, 550674 LINE CR1 714 chr7 16960698 16961031 TguLTR5e 264 - 16960698 16961031 0 2 103,213, 0,120, -,-, 550735 LTR ERVL 714 chr7 16989118 16989273 Eulor6B 376 . 16989118 16989273 0 2 143,12, 0,143, -,+, 550744 DNA? DNA? 715 chr7 17095773 17096419 CR1-11_Crp 298 - 17095773 17096419 0 2 220,98, 0,548, -,-, 550789 LINE CR1 715 chr7 17120869 17121130 CR1-C3 612 + 17120869 17121130 0 2 15,96, 0,165, +,+, 550797 LINE CR1 716 chr7 17196739 17197323 GGLTR11 799 - 17196739 17197323 0 2 458,86, 0,498, -,-, 550836 LTR ERV1 716 chr7 17274888 17275757 CR1-C4 361 - 17274888 17275757 0 2 145,156, 0,713, -,-, 550867 LINE CR1 716 chr7 17278116 17278611 CR1-X2 301 + 17278116 17278611 0 2 164,302, 0,193, +,+, 550872 LINE CR1 716 chr7 17284037 17285350 CR1-C4 333 - 17284037 17285350 0 3 95,198,652, 0,439,661, -,-,-, 550878 LINE CR1 716 chr7 17296733 17296976 AmnSINE1 335 + 17296733 17296976 0 2 92,112, 0,131, +,+, 550892 SINE 5S-Deu-L2 717 chr7 17315388 17315440 (TCTT)n 394 + 17315388 17315440 0 2 23,6, 0,46, +,+, 550900 Simple_repeat Simple_repeat 717 chr7 17337614 17338053 GGLTR9 572 + 17337614 17338053 0 2 166,178, 0,261, +,+, 550921 LTR ERVL 717 chr7 17412067 17412212 Char12Mar1_GG 570 - 17412067 17412212 0 2 65,80, 0,65, -,-, 550950 DNA hAT-Charlie 717 chr7 17414287 17414743 CR1-F2 470 - 17414287 17414743 0 2 343,103, 0,353, -,-, 550951 LINE CR1 718 chr7 17489084 17490177 CR1-L3B_Croc 193 - 17489084 17490177 0 2 343,185, 0,908, -,-, 550984 LINE CR1 719 chr7 17591595 17592223 CR1-Y4 558 - 17591595 17592223 0 2 132,402, 0,226, -,-, 551013 LINE CR1 719 chr7 17613075 17613391 CR1-11_Crp 304 - 17613075 17613391 0 2 71,225, 0,91, -,-, 551018 LINE CR1 719 chr7 17630245 17630564 CR1-11_Crp 297 - 17630245 17630564 0 2 71,228, 0,91, -,-, 551022 LINE CR1 720 chr7 17751094 17752115 CR1-L3B_Croc 152 - 17751094 17752115 0 2 132,180, 0,841, -,-, 551071 LINE CR1 720 chr7 17795952 17796570 CR1-X1 600 + 17795952 17796570 0 2 81,249, 0,369, +,+, 551101 LINE CR1 721 chr7 17912482 17912826 GGERV10_LTR 600 + 17912482 17912826 0 2 95,160, 0,184, +,+, 551141 LTR ERVL 722 chr7 18071609 18071679 (TCCGC)n 504 + 18071609 18071679 0 2 16,7, 0,63, +,+, 551218 Simple_repeat Simple_repeat 723 chr7 18147675 18148130 CR1-C4 498 - 18147675 18148130 0 2 69,298, 0,157, -,-, 551250 LINE CR1 725 chr7 18470090 18470152 (ATAT)n 364 + 18470090 18470152 0 2 6,10, 0,52, +,+, 551384 Simple_repeat Simple_repeat 726 chr7 18577077 18577345 CR1-D2 612 + 18577077 18577345 0 2 30,195, 0,73, +,+, 551429 LINE CR1 726 chr7 18594401 18594589 CR1-Y4 483 + 18594401 18594589 0 2 103,85, 0,103, +,+, 551438 LINE CR1 727 chr7 18628084 18628495 CR1-Y1_Aves 336 - 18628084 18628495 0 2 270,74, 0,337, -,-, 551450 LINE CR1 728 chr7 18752412 18752954 TguLTR5e 341 - 18752412 18752954 0 2 149,368, 0,174, -,-, 551496 LTR ERVL 728 chr7 18757814 18759259 CR1-D2 586 - 18757814 18759259 0 2 536,600, 0,845, -,-, 551501 LINE CR1 728 chr7 18791477 18791537 (ATAC)n 452 + 18791477 18791537 0 2 6,19, 0,41, +,+, 551508 Simple_repeat Simple_repeat 730 chr7 19042261 19042568 GGERV10_LTR 547 + 19042261 19042568 0 2 49,156, 0,151, +,+, 551589 LTR ERVL 730 chr7 19090658 19090712 (CAG)n 526 + 19090658 19090712 0 2 18,7, 0,47, +,+, 551606 Simple_repeat Simple_repeat 730 chr7 19099536 19100353 CR1-F2 717 - 19099536 19100353 0 2 162,655, 0,162, -,-, 551614 LINE CR1 731 chr7 19210693 19211848 CR1-H 753 + 19210693 19211848 0 2 206,942, 0,213, +,+, 551669 LINE CR1 731 chr7 19226397 19226622 Char12Mar1_GG 619 - 19226397 19226622 0 3 62,78,44, 0,66,181, -,-,-, 551674 DNA hAT-Charlie 734 chr7 19652500 19652602 GA-rich 418 + 19652500 19652602 0 2 40,43, 0,59, +,+, 551844 Low_complexity Low_complexity 735 chr7 19683376 19683441 (ACAA)n 416 + 19683376 19683441 0 2 19,12, 0,53, +,+, 551866 Simple_repeat Simple_repeat 736 chr7 19811960 19812456 GGLTR5B 671 - 19811960 19812456 0 2 206,240, 0,256, -,-, 551941 LTR ERVL 736 chr7 19815888 19816022 (TA)n 914 + 19815888 19816022 0 2 47,66, 0,68, +,+, 551943 Simple_repeat Simple_repeat 737 chr7 19949693 19950703 L2-1_AMi 106 - 19949693 19950703 0 2 363,404, 0,606, -,-, 552006 LINE L2 737 chr7 19952736 19954234 CR1-D 746 - 19952736 19954234 0 2 901,597, 0,901, -,-, 552011 LINE CR1 738 chr7 20126579 20127726 Mariner1_GG 597 - 20126579 20127726 0 2 738,409, 0,738, -,-, 552095 DNA TcMar-Mariner 738 chr7 20153303 20153773 CR1-F2 493 + 20153303 20153773 0 2 380,80, 0,390, +,+, 552109 LINE CR1 739 chr7 20315403 20315932 GGLTR5B 104 - 20315403 20315932 0 2 206,250, 0,279, -,-, 552186 LTR ERVL 740 chr7 20332234 20333208 CR1-C4 606 + 20332234 20333208 0 2 496,469, 0,505, +,+, 552196 LINE CR1 740 chr7 20349505 20349570 (TCTTTC)n 356 + 20349505 20349570 0 2 12,20, 0,45, +,+, 552204 Simple_repeat Simple_repeat 740 chr7 20384973 20388683 CR1-Y4 616 + 20384973 20388683 0 2 537,626, 0,3084, +,+, 552225 LINE CR1 740 chr7 20385512 20388075 GGERVL-A-int 796 - 20385512 20388075 0 2 446,2115, 0,448, -,-, 552226 LTR ERVL 740 chr7 20393854 20393961 (TTTTC)n 200 + 20393854 20393961 0 2 16,21, 0,86, +,+, 552228 Simple_repeat Simple_repeat 740 chr7 20426084 20426935 CR1-C4 510 + 20426084 20426935 0 2 463,160, 0,691, +,+, 552254 LINE CR1 742 chr7 20617349 20617411 (TACA)n 316 + 20617349 20617411 0 2 6,38, 0,24, +,+, 552395 Simple_repeat Simple_repeat 742 chr7 20640888 20641362 Char12Mar1_GG 604 - 20640888 20641362 0 2 315,144, 0,330, -,-, 552406 DNA hAT-Charlie 742 chr7 20645756 20646197 CR1-11_Crp 218 - 20645756 20646197 0 2 245,160, 0,281, -,-, 552409 LINE CR1 742 chr7 20702762 20702824 (T)n 736 + 20702762 20702824 0 2 24,19, 0,43, +,+, 552442 Simple_repeat Simple_repeat 743 chr7 20730055 20730136 (T)n 803 + 20730055 20730136 0 2 29,29, 0,52, +,+, 552464 Simple_repeat Simple_repeat 743 chr7 20752333 20752910 CR1-C4 673 + 20752333 20752910 0 2 120,457, 0,120, +,+, 552478 LINE CR1 743 chr7 20768655 20769709 CR1-L3A_Croc 217 + 20768655 20769709 0 2 279,374, 0,680, +,+, 552486 LINE CR1 743 chr7 20803753 20805101 CR1-L3A_Croc 75 + 20803753 20805101 0 2 405,338, 0,1010, +,+, 552509 LINE CR1 745 chr7 20985497 20988400 CR1-Y1_Aves 543 + 20985497 20988400 0 2 85,133, 0,2770, +,+, 552621 LINE CR1 745 chr7 20999407 20999518 (TTTTCA)n 344 + 20999407 20999518 0 2 9,63, 0,48, +,+, 552631 Simple_repeat Simple_repeat 745 chr7 21018424 21018826 CR1-11_Crp 253 - 21018424 21018826 0 2 151,156, 0,246, -,-, 552645 LINE CR1 745 chr7 21033663 21035541 CR1-L3B_Croc 229 - 21033663 21035541 0 3 310,167,393, 0,914,1485, -,-,-, 552657 LINE CR1 746 chr7 21134332 21135077 CR1-X2 464 + 21134332 21135077 0 2 412,333, 0,412, +,+, 552695 LINE CR1 746 chr7 21154839 21155050 Char12Mar1_GG 524 - 21154839 21155050 0 2 145,66, 0,145, -,-, 552709 DNA hAT-Charlie 746 chr7 21202319 21203939 CR1-F2 639 - 21202319 21203939 0 3 180,146,1053, 0,180,567, -,-,-, 552732 LINE CR1 93 chr7 21364329 21364871 CR1-G 745 + 21364329 21364871 0 2 504,38, 0,504, +,+, 552823 LINE CR1 748 chr7 21428248 21428708 CR1-X2 503 - 21428248 21428708 0 2 310,149, 0,311, -,-, 552863 LINE CR1 748 chr7 21467631 21467772 (A)n 789 + 21467631 21467772 0 2 44,39, 0,102, +,+, 552887 Simple_repeat Simple_repeat 750 chr7 21731904 21733330 CR1-D2 600 - 21731904 21733330 0 3 530,567,329, 0,530,1097, -,-,-, 553018 LINE CR1 751 chr7 21786294 21787543 CR1-F 419 - 21786294 21787543 0 2 1017,232, 0,1017, -,-, 553045 LINE CR1 752 chr7 21986216 21988285 CR1-Y2_Aves 348 + 21986216 21988285 0 2 473,1250, 0,819, +,+, 553134 LINE CR1 753 chr7 22069649 22070226 CR1-L3A_Croc 142 + 22069649 22070226 0 2 224,290, 0,287, +,+, 553150 LINE CR1 755 chr7 22396351 22398316 CR1-L3B_Croc 340 + 22396351 22398316 0 2 845,508, 0,1457, +,+, 553299 LINE CR1 756 chr7 22481375 22481784 (CCAT)n 264 + 22481375 22481784 0 2 135,216, 0,193, +,+, 553341 Simple_repeat Simple_repeat 757 chr7 22672105 22672264 G-rich 369 + 22672105 22672264 0 2 50,53, 0,106, +,+, 553410 Low_complexity Low_complexity 759 chr7 22931169 22932008 CR1-L3B_Croc 254 - 22931169 22932008 0 2 372,134, 0,705, -,-, 553562 LINE CR1 760 chr7 22961108 22961786 GGLTR8B 533 + 22961108 22961786 0 2 210,468, 0,210, +,+, 553582 LTR ERVL 761 chr7 23086649 23087873 CR1-L3B_Croc 208 + 23086649 23087873 0 2 592,171, 0,1053, +,+, 553640 LINE CR1 762 chr7 23216167 23216416 CR1-C4 588 + 23216167 23216416 0 2 134,115, 0,134, +,+, 553709 LINE CR1 762 chr7 23289014 23290113 CR1-C4 643 - 23289014 23290113 0 2 561,538, 0,561, -,-, 553753 LINE CR1 762 chr7 23292843 23299308 CR1-C4 547 + 23292843 23299308 0 3 43,59,656, 0,5402,5809, +,+,+, 553756 LINE CR1 762 chr7 23308062 23308589 AmnSINE1 319 - 23308062 23308589 0 2 126,84, 0,443, -,-, 553765 SINE 5S-Deu-L2 765 chr7 23644440 23644808 CR1-L3A_Croc 303 - 23644440 23644808 0 2 175,94, 0,274, -,-, 553968 LINE CR1 770 chr7 24293927 24294157 CR1-F2 208 - 24293927 24294157 0 2 138,27, 0,203, -,-, 554251 LINE CR1 770 chr7 24348668 24349366 CR1-D2 577 - 24348668 24349366 0 2 562,136, 0,562, -,-, 554285 LINE CR1 770 chr7 24350476 24350903 CR1-F2 510 + 24350476 24350903 0 2 76,351, 0,76, +,+, 554286 LINE CR1 770 chr7 24353918 24354761 CR1-F2 611 + 24353918 24354761 0 3 748,57,38, 0,748,805, +,+,+, 554288 LINE CR1 771 chr7 24398190 24398266 (ACAA)n 322 + 24398190 24398266 0 2 28,11, 0,65, +,+, 554308 Simple_repeat Simple_repeat 771 chr7 24400434 24400665 GGLTR8A 538 + 24400434 24400665 0 2 101,124, 0,107, +,+, 554311 LTR ERVL 772 chr7 24555554 24556357 CR1-C4 517 - 24555554 24556357 0 2 160,643, 0,160, -,-, 554420 LINE CR1 773 chr7 24746235 24746551 CR1-H 789 + 24746235 24746551 0 2 263,53, 0,263, +,+, 554513 LINE CR1 774 chr7 24882986 24883303 CR1-L3A_Croc 349 + 24882986 24883303 0 2 159,114, 0,203, +,+, 554580 LINE CR1 774 chr7 24902424 24903631 CR1-L3B_Croc 219 - 24902424 24903631 0 3 196,142,367, 0,652,840, -,-,-, 554591 LINE CR1 775 chr7 24957566 24963375 GGLTR3F1 900 + 24957566 24963375 0 2 494,5314, 0,495, +,+, 554626 LTR ERVL 775 chr7 24963375 24963905 GGLTR3F1 936 + 24963375 24963905 0 2 36,494, 0,36, +,+, 554627 LTR ERVL 775 chr7 24976447 24976572 GGLTR5B 683 - 24976447 24976572 0 2 64,61, 0,64, -,-, 554635 LTR ERVL 776 chr7 25138930 25139244 GGLTR9 473 - 25138930 25139244 0 2 238,62, 0,252, -,-, 554731 LTR ERVL 777 chr7 25250438 25250475 (TTTGC)n 586 + 25250438 25250475 0 2 6,13, 0,24, +,+, 554805 Simple_repeat Simple_repeat 777 chr7 25264764 25268480 CR1-F2 368 - 25264764 25268480 0 2 169,195, 0,3521, -,-, 554820 LINE CR1 778 chr7 25297303 25297954 CR1-D2 663 + 25297303 25297954 0 2 202,132, 0,519, +,+, 554840 LINE CR1 778 chr7 25311421 25312341 GGLTR5A 538 - 25311421 25312341 0 2 436,172, 0,748, -,-, 554846 LTR ERVL 778 chr7 25332066 25332962 CR1-F2 407 + 25332066 25332962 0 2 709,127, 0,769, +,+, 554856 LINE CR1 778 chr7 25408935 25409522 CR1-F2 548 + 25408935 25409522 0 2 52,112, 0,475, +,+, 554887 LINE CR1 778 chr7 25416247 25416702 Char12Mar1_GG 605 - 25416247 25416702 0 2 39,185, 0,270, -,-, 554894 DNA hAT-Charlie 778 chr7 25426444 25426898 Char12Mar1_GG 610 - 25426444 25426898 0 2 39,184, 0,270, -,-, 554902 DNA hAT-Charlie 779 chr7 25542019 25542597 CR1-Y2_Aves 346 - 25542019 25542597 0 2 122,437, 0,141, -,-, 554945 LINE CR1 781 chr7 25759784 25760222 CR1-L3A_Croc 275 - 25759784 25760222 0 2 172,87, 0,351, -,-, 555030 LINE CR1 782 chr7 25884739 25884973 MIR1_Amn 322 + 25884739 25884973 0 2 149,59, 0,175, +,+, 555114 SINE MIR 782 chr7 25902300 25904440 CR1-L3B_Croc 366 - 25902300 25904440 0 2 1593,114, 0,2026, -,-, 555124 LINE CR1 782 chr7 25931200 25931323 (T)n 765 + 25931200 25931323 0 2 34,63, 0,60, +,+, 555142 Simple_repeat Simple_repeat 783 chr7 25970351 25970987 CR1-L3A_Croc 205 - 25970351 25970987 0 2 383,182, 0,454, -,-, 555165 LINE CR1 784 chr7 26193761 26194309 CR1-Y2_Aves 321 + 26193761 26194309 0 2 190,125, 0,423, +,+, 555279 LINE CR1 786 chr7 26457755 26458657 CR1-Y2_Aves 265 + 26457755 26458657 0 3 205,388,246, 0,205,656, +,+,+, 555356 LINE CR1 787 chr7 26580744 26581002 Eulor4 488 + 26580744 26581002 0 2 65,110, 0,148, +,+, 555398 Unknown Unknown 789 chr7 26773259 26774351 CR1-L3B_Croc 271 + 26773259 26774351 0 4 298,134,108,257, 0,373,715,835, +,+,+,+, 555499 LINE CR1 790 chr7 26919873 26920348 CR1-11_Crp 341 - 26919873 26920348 0 2 84,206, 0,269, -,-, 555549 LINE CR1 790 chr7 26940635 26940983 CR1-L3A_Croc 217 + 26940635 26940983 0 2 131,91, 0,257, +,+, 555558 LINE CR1 790 chr7 26955484 26956165 CR1-Y2_Aves 144 + 26955484 26956165 0 2 203,437, 0,244, +,+, 555567 LINE CR1 791 chr7 27069746 27070689 Char12Mar1_GG 590 - 27069746 27070689 0 2 395,547, 0,396, -,-, 555610 DNA hAT-Charlie 791 chr7 27073786 27074683 CR1-11_Crp 135 + 27073786 27074683 0 2 497,330, 0,567, +,+, 555612 LINE CR1 792 chr7 27144137 27144753 CR1-8_Crp 226 + 27144137 27144753 0 2 128,322, 0,294, +,+, 555639 LINE CR1 793 chr7 27263765 27264262 Char12Mar1_GG 746 - 27263765 27264262 0 2 115,305, 0,192, -,-, 555680 DNA hAT-Charlie 793 chr7 27265120 27265840 CR1-D2 507 + 27265120 27265840 0 2 70,650, 0,70, +,+, 555682 LINE CR1 793 chr7 27340065 27340135 (AATAG)n 316 + 27340065 27340135 0 2 10,8, 0,62, +,+, 555701 Simple_repeat Simple_repeat 794 chr7 27402799 27403631 CR1-F2 519 + 27402799 27403631 0 2 757,62, 0,770, +,+, 555728 LINE CR1 794 chr7 27524020 27524394 CR1-X1 649 + 27524020 27524394 0 2 216,135, 0,239, +,+, 555779 LINE CR1 797 chr7 27808743 27808922 CR1-F2 301 - 27808743 27808922 0 2 42,105, 0,74, -,-, 555886 LINE CR1 797 chr7 27838787 27838990 CR1-Y4 662 - 27838787 27838990 0 2 145,50, 0,153, -,-, 555905 LINE CR1 798 chr7 27968332 27973062 CR1-F2 465 - 27968332 27973062 0 2 126,81, 0,4649, -,-, 555959 LINE CR1 801 chr7 28338135 28338983 CR1-11_Crp 129 + 28338135 28338983 0 2 533,284, 0,564, +,+, 556130 LINE CR1 801 chr7 28382074 28386132 CR1-F2 394 - 28382074 28386132 0 2 582,165, 0,3893, -,-, 556151 LINE CR1 801 chr7 28387423 28387773 CR1-H 305 - 28387423 28387773 0 2 238,108, 0,242, -,-, 556155 LINE CR1 802 chr7 28519955 28520548 CR1-F2 377 + 28519955 28520548 0 2 180,60, 0,533, +,+, 556202 LINE CR1 803 chr7 28670306 28670411 A-rich 603 + 28670306 28670411 0 2 35,36, 0,69, +,+, 556293 Low_complexity Low_complexity 806 chr7 28972126 28972393 CR1-X2 713 + 28972126 28972393 0 2 46,221, 0,46, +,+, 556452 LINE CR1 806 chr7 29095678 29096760 CR1-Y2_Aves 323 - 29095678 29096760 0 2 769,291, 0,791, -,-, 556517 LINE CR1 807 chr7 29107290 29108048 CR1-C4 622 + 29107290 29108048 0 2 384,371, 0,387, +,+, 556521 LINE CR1 808 chr7 29282741 29282914 Char12Mar1_GG 624 - 29282741 29282914 0 2 55,118, 0,55, -,-, 556586 DNA hAT-Charlie 808 chr7 29356895 29356981 (T)n 714 + 29356895 29356981 0 2 27,28, 0,58, +,+, 556631 Simple_repeat Simple_repeat 808 chr7 29358902 29358972 (T)n 831 + 29358902 29358972 0 2 27,30, 0,40, +,+, 556632 Simple_repeat Simple_repeat 811 chr7 29662589 29663129 CR1-11_Crp 279 - 29662589 29663129 0 2 68,150, 0,390, -,-, 556777 LINE CR1 811 chr7 29705474 29709828 CR1-F2 451 - 29705474 29709828 0 2 71,112, 0,4242, -,-, 556798 LINE CR1 812 chr7 29846488 29847705 CR1-L3B_Croc 290 + 29846488 29847705 0 3 101,108,118, 0,159,1099, +,+,+, 556841 LINE CR1 812 chr7 29868023 29869157 CR1-11_Crp 317 + 29868023 29869157 0 2 161,116, 0,1018, +,+, 556849 LINE CR1 815 chr7 30166745 30166999 CR1-E 756 + 30166745 30166999 0 2 172,82, 0,172, +,+, 556951 LINE CR1 815 chr7 30220951 30221697 CR1-L3B_Croc 165 - 30220951 30221697 0 2 400,320, 0,426, -,-, 556971 LINE CR1 815 chr7 30265699 30265767 (ATT)n 352 + 30265699 30265767 0 2 13,17, 0,51, +,+, 556988 Simple_repeat Simple_repeat 818 chr7 30587724 30587924 TguLTR5e 418 + 30587724 30587924 0 2 136,56, 0,144, +,+, 557097 LTR ERVL 820 chr7 30909092 30909164 A-rich 348 + 30909092 30909164 0 2 33,11, 0,61, +,+, 557209 Low_complexity Low_complexity 820 chr7 30925397 30926203 CR1-11_Crp 333 + 30925397 30926203 0 2 439,138, 0,668, +,+, 557218 LINE CR1 822 chr7 31173328 31175384 CR1-Y 710 + 31173328 31175384 0 2 51,87, 0,1969, +,+, 557302 LINE CR1 823 chr7 31300365 31300635 CR1-X1 594 + 31300365 31300635 0 2 228,42, 0,228, +,+, 557336 LINE CR1 824 chr7 31401563 31407386 GGERV10_LTR 989 - 31401563 31407386 0 3 220,5380,222, 0,220,5601, -,-,-, 557376 LTR ERVL 824 chr7 31414981 31415650 GGLTR11-int 549 + 31414981 31415650 0 2 130,225, 0,444, +,+, 557382 LTR ERV1 825 chr7 31523267 31523316 A-rich 516 + 31523267 31523316 0 2 12,15, 0,34, +,+, 557428 Low_complexity Low_complexity 826 chr7 31624150 31624216 (GCGG)n 350 + 31624150 31624216 0 2 19,17, 0,49, +,+, 557473 Simple_repeat Simple_repeat 826 chr7 31670913 31671039 (T)n 562 + 31670913 31671039 0 2 41,41, 0,85, +,+, 557499 Simple_repeat Simple_repeat 827 chr7 31766984 31767226 L2-1_AMi 382 - 31766984 31767226 0 2 131,66, 0,176, -,-, 557545 LINE L2 828 chr7 31850657 31850819 CR1-C2 653 + 31850657 31850819 0 2 121,41, 0,121, +,+, 557583 LINE CR1 828 chr7 31943422 31944179 CR1-F 596 - 31943422 31944179 0 2 443,289, 0,468, -,-, 557644 LINE CR1 828 chr7 31947286 31947647 CR1-11_Crp 373 - 31947286 31947647 0 2 107,95, 0,266, -,-, 557648 LINE CR1 828 chr7 31978734 31979294 REP131 156 - 31978734 31979294 0 2 287,183, 0,377, -,-, 557667 DNA? DNA? 830 chr7 32190797 32191327 CR1-X2 549 - 32190797 32191327 0 2 66,464, 0,66, -,-, 557774 LINE CR1 830 chr7 32211899 32212367 AmnSINE1 289 - 32211899 32212367 0 2 117,120, 0,348, -,-, 557779 SINE 5S-Deu-L2 832 chr7 32386551 32387226 GGLTR3D 632 + 32386551 32387226 0 2 195,424, 0,251, +,+, 557887 LTR ERVL 832 chr7 32426554 32426853 Char12Mar1_GG 617 - 32426554 32426853 0 2 126,173, 0,126, -,-, 557914 DNA hAT-Charlie 832 chr7 32460233 32460500 CR1-Y4 396 + 32460233 32460500 0 2 128,139, 0,128, +,+, 557922 LINE CR1 833 chr7 32547363 32547792 Char12Mar1_GG 643 - 32547363 32547792 0 2 109,320, 0,109, -,-, 557960 DNA hAT-Charlie 833 chr7 32616206 32616335 A-rich 637 + 32616206 32616335 0 2 46,29, 0,100, +,+, 557986 Low_complexity Low_complexity 834 chr7 32713197 32713438 Charlie12_GG 520 + 32713197 32713438 0 2 21,192, 0,49, +,+, 558057 DNA hAT-Charlie 835 chr7 32851848 32852368 CR1-Y4 598 - 32851848 32852368 0 2 219,180, 0,340, -,-, 558120 LINE CR1 835 chr7 32896852 32896947 (TGCAGC)n 336 + 32896852 32896947 0 2 23,39, 0,56, +,+, 558142 Simple_repeat Simple_repeat 837 chr7 33083569 33084380 CR1-L3A_Croc 226 - 33083569 33084380 0 2 151,586, 0,225, -,-, 558265 LINE CR1 837 chr7 33142858 33143113 (CTCCCTT)n 28 + 33142858 33143113 0 2 202,31, 0,224, +,+, 558287 Simple_repeat Simple_repeat 838 chr7 33255129 33256580 OldhAT1 262 - 33255129 33256580 0 3 426,205,259, 0,744,1192, -,-,-, 558373 DNA hAT-Ac 838 chr7 33259319 33259562 CR1-Y3 626 + 33259319 33259562 0 2 97,116, 0,127, +,+, 558377 LINE CR1 840 chr7 33470372 33470420 (TTTAA)n 404 + 33470372 33470420 0 2 6,6, 0,42, +,+, 558492 Simple_repeat Simple_repeat 842 chr7 33802337 33803936 CR1-C4 553 - 33802337 33803936 0 2 170,1429, 0,170, -,-, 558696 LINE CR1 843 chr7 33823212 33823266 (ATATAA)n 508 + 33823212 33823266 0 2 16,11, 0,43, +,+, 558708 Simple_repeat Simple_repeat 843 chr7 33841207 33841593 CR1-Y3 725 - 33841207 33841593 0 2 233,88, 0,298, -,-, 558720 LINE CR1 846 chr7 34266534 34268086 CR1-H 658 + 34266534 34268086 0 2 94,100, 0,1452, +,+, 558968 LINE CR1 847 chr7 34376264 34376681 Char12Mar1_GG 672 - 34376264 34376681 0 2 328,88, 0,329, -,-, 559029 DNA hAT-Charlie 851 chr7 34976048 34976481 CR1-X1 521 - 34976048 34976481 0 2 72,79, 0,354, -,-, 559279 LINE CR1 852 chr7 35033790 35033880 CR1-C3 664 - 35033790 35033880 0 2 47,43, 0,47, -,-, 559302 LINE CR1 853 chr7 35161858 35162141 CR1-C3 706 - 35161858 35162141 0 2 45,125, 0,158, -,-, 559380 LINE CR1 853 chr7 35238776 35238928 CR1-X2 686 - 35238776 35238928 0 2 62,38, 0,114, -,-, 559442 LINE CR1 854 chr7 35312443 35312968 CR1-H 775 + 35312443 35312968 0 2 412,113, 0,412, +,+, 559506 LINE CR1 856 chr7 35596080 35596572 CR1-C4 537 + 35596080 35596572 0 2 115,73, 0,419, +,+, 559591 LINE CR1 857 chr7 35686986 35687585 CR1-Y4 531 + 35686986 35687585 0 2 145,454, 0,145, +,+, 559636 LINE CR1 857 chr7 35710547 35711051 CR1-Y4 471 + 35710547 35711051 0 2 286,217, 0,287, +,+, 559648 LINE CR1 858 chr7 35802118 35804185 CR1-F2 347 + 35802118 35804185 0 2 35,157, 0,1910, +,+, 559705 LINE CR1 858 chr7 35823907 35827388 CR1-B2 267 - 35823907 35827388 0 2 152,272, 0,3209, -,-, 559733 LINE CR1 858 chr7 35880581 35880862 CR1-C4 572 - 35880581 35880862 0 2 46,137, 0,144, -,-, 559774 LINE CR1 859 chr7 35920887 35921006 CR1-H2 566 + 35920887 35921006 0 2 11,45, 0,74, +,+, 559797 LINE CR1 859 chr7 35969219 35969478 CR1-Y4 269 - 35969219 35969478 0 2 104,155, 0,104, -,-, 559839 LINE CR1 859 chr7 35989310 35991908 CR1-X2 389 + 35989310 35991908 0 2 165,108, 0,2490, +,+, 559859 LINE CR1 859 chr7 35993682 35993824 CR1-C3 639 - 35993682 35993824 0 2 56,51, 0,91, -,-, 559865 LINE CR1 859 chr7 36024092 36024517 CR1-F2 412 - 36024092 36024517 0 2 164,258, 0,167, -,-, 559888 LINE CR1 861 chr7 36225809 36225871 (TCCGC)n 388 + 36225809 36225871 0 2 14,15, 0,47, +,+, 560014 Simple_repeat Simple_repeat 861 chr7 36245079 36245298 CR1-Y4 323 - 36245079 36245298 0 2 99,120, 0,99, -,-, 560027 LINE CR1 863 chr7 36537989 36540776 CR1-E 593 + 36537989 36540776 0 2 221,242, 0,2545, +,+, 560170 LINE CR1 864 chr7 36647554 36648260 GGLTR8A 375 + 36647554 36648260 0 2 191,513, 0,193, +,+, 560222 LTR ERVL 864 chr7 36674634 36675371 CR1-E 752 + 36674634 36675371 0 2 363,374, 0,363, +,+, 560235 LINE CR1 864 chr7 36689430 36689593 (T)n 851 + 36689430 36689593 0 3 19,24,25, 0,74,138, +,+,+, 560247 Simple_repeat Simple_repeat 865 chr7 36722062 36722747 Char12Mar1_GG 516 - 36722062 36722747 0 2 61,431, 0,254, -,-, 560266 DNA hAT-Charlie 865 chr7 36742570 36742675 (A)n 816 + 36742570 36742675 0 2 24,23, 0,82, +,+, 560279 Simple_repeat Simple_repeat 865 chr7 36755903 36756236 GGLTR5A 442 - 36755903 36756236 0 2 56,265, 0,68, -,-, 560285 LTR ERVL 865 chr7 36802869 36804410 CR1-E 351 + 36802869 36804410 0 2 689,613, 0,928, +,+, 560325 LINE CR1 866 chr7 36880231 36880899 CR1-D 691 + 36880231 36880899 0 2 57,611, 0,57, +,+, 560371 LINE CR1 866 chr7 36893575 36893790 (TAATATAA)n 432 + 36893575 36893790 0 2 20,8, 0,207, +,+, 560382 Simple_repeat Simple_repeat 866 chr7 36934115 36934965 CR1-G 516 - 36934115 36934965 0 2 386,147, 0,703, -,-, 560418 LINE CR1 585 chr7_NT_461078v1_random 62589 63977 CR1-Y2 172 - 62589 63977 0 2 221,479, 0,909, -,-, 560446 LINE CR1 585 chr7_NT_461082v1_random 2106 2376 Sat-CR1_GG 252 - 2106 2376 0 2 15,64, 0,206, -,-, 560509 Satellite Satellite 585 chr7_NT_461082v1_random 9133 9669 Sat-CR1_GG 188 - 9133 9669 0 2 277,65, 0,471, -,-, 560526 Satellite Satellite 585 chr7_NT_461082v1_random 14815 15336 Sat-CR1_GG 202 - 14815 15336 0 2 258,70, 0,451, -,-, 560540 Satellite Satellite 585 chr7_NT_461082v1_random 16680 20919 Sat-CR1_GG 205 - 16680 20919 0 3 330,143,240, 0,379,3999, -,-,-, 560544 Satellite Satellite 585 chr7_NT_461082v1_random 18714 19063 Sat-CR1_GG 250 - 18714 19063 0 2 86,71, 0,278, -,-, 560547 Satellite Satellite 585 chr7_NT_461085v1_random 3796 4305 Sat-CR1_GG 214 - 3796 4305 0 2 251,65, 0,444, -,-, 560576 Satellite Satellite 585 chr7_NT_461085v1_random 7284 7598 GGXHOI 321 . 7284 7598 0 2 153,142, 0,172, +,-, 560583 Satellite W-chromosome 585 chr7_NT_461085v1_random 7635 7985 Sat-CR1_GG 182 - 7635 7985 0 2 106,51, 0,299, -,-, 560584 Satellite Satellite 585 chr7_NT_461085v1_random 11005 11315 GGXHOI 291 . 11005 11315 0 2 149,142, 0,168, +,-, 560593 Satellite W-chromosome 585 chr7_NT_461085v1_random 15059 15371 Sat-CR1_GG 262 - 15059 15371 0 2 59,63, 0,249, -,-, 560602 Satellite Satellite 585 chr7_NT_461085v1_random 16831 17188 Sat-CR1_GG 186 - 16831 17188 0 2 104,67, 0,290, -,-, 560608 Satellite Satellite 585 chr7_NT_461088v1_random 1921 2236 GGXHOI 297 . 1921 2236 0 2 153,143, 0,172, +,-, 560627 Satellite W-chromosome 585 chr7_NT_461088v1_random 2123 2638 Sat-CR1_GG 188 - 2123 2638 0 2 257,65, 0,450, -,-, 560628 Satellite Satellite 585 chr7_NT_461088v1_random 3803 4119 GGXHOI 298 . 3803 4119 0 2 154,143, 0,173, +,-, 560632 Satellite W-chromosome 585 chr7_NT_461088v1_random 4006 4521 Sat-CR1_GG 210 - 4006 4521 0 2 257,65, 0,450, -,-, 560633 Satellite Satellite 585 chr7_NT_461088v1_random 5695 6011 GGXHOI 298 . 5695 6011 0 2 154,143, 0,173, +,-, 560637 Satellite W-chromosome 585 chr7_NT_461088v1_random 5898 6413 Sat-CR1_GG 210 - 5898 6413 0 2 257,65, 0,450, -,-, 560638 Satellite Satellite 585 chr7_NT_461088v1_random 7766 8305 Sat-CR1_GG 174 - 7766 8305 0 2 281,65, 0,474, -,-, 560643 Satellite Satellite 585 chr7_NT_461088v1_random 11263 11575 GGXHOI 310 . 11263 11575 0 2 153,140, 0,172, +,-, 560652 Satellite W-chromosome 585 chr7_NT_461088v1_random 11465 11976 Sat-CR1_GG 176 - 11465 11976 0 2 253,64, 0,447, -,-, 560653 Satellite Satellite 585 chr7_NT_461088v1_random 13145 13685 Sat-CR1_GG 176 - 13145 13685 0 2 283,97, 0,443, -,-, 560659 Satellite Satellite 585 chr7_NT_461090v1_random 13596 13650 (TATATG)n 376 + 13596 13650 0 2 10,14, 0,40, +,+, 560680 Simple_repeat Simple_repeat 585 chr7_NT_461097v1_random 6075 13831 GGERVL-B-int 824 + 6075 13831 0 4 476,2553,1212,412, 0,479,5626,7344, +,+,+,+, 560717 LTR ERVL 585 chr7_NT_461105v1_random 5560 6842 CR1-F2 544 + 5560 6842 0 2 989,293, 0,989, +,+, 560769 LINE CR1 585 chr7_NT_461105v1_random 9066 10765 CR1-X1 410 + 9066 10765 0 2 439,199, 0,1500, +,+, 560770 LINE CR1 585 chr7_NT_461106v1_random 9655 11497 (TTCCTT)n 504 + 9655 11497 0 2 11,7, 0,1835, +,+, 560776 Simple_repeat Simple_repeat 585 chr7_NT_461111v1_random 6411 7702 CR1-D 708 + 6411 7702 0 2 502,788, 0,503, +,+, 560804 LINE CR1 585 chr7_NT_461113v1_random 6492 7347 CR1-C4 421 - 6492 7347 0 2 559,260, 0,595, -,-, 560818 LINE CR1 585 chr7_NT_461133v1_random 2637 3394 CR1-C3 524 - 2637 3394 0 2 283,219, 0,538, -,-, 560891 LINE CR1 585 chr7_NT_461135v1_random 8328 8787 CR1-Y2_Aves 351 + 8328 8787 0 2 318,122, 0,337, +,+, 560905 LINE CR1 585 chr7_NT_461177v1_random 1793 2853 CR1-L3A_Croc 168 - 1793 2853 0 2 637,279, 0,781, -,-, 561046 LINE CR1 585 chr7_NT_461192v1_random 3027 3379 CR1-C4 521 - 3027 3379 0 2 55,266, 0,86, -,-, 561097 LINE CR1 585 chr7_NT_461202v1_random 3141 3886 CR1-X2 481 - 3141 3886 0 2 355,390, 0,355, -,-, 561131 LINE CR1 585 chr7_NT_461224v1_random 1131 2840 CR1-G 510 - 1131 2840 0 3 388,156,596, 0,707,1113, -,-,-, 561188 LINE CR1 585 chr7_NT_461320v1_random 178 996 Sat-CR1_GG 212 - 178 996 0 2 360,136, 0,682, -,-, 561323 Satellite Satellite 585 chr8 7894 9596 CR1-G 531 + 7894 9596 0 3 594,157,386, 0,849,1316, +,+,+, 561336 LINE CR1 585 chr8 24152 24479 GGERV10_LTR 578 + 24152 24479 0 2 75,161, 0,166, +,+, 561347 LTR ERVL 585 chr8 55170 58747 CR1-C3 374 + 55170 58747 0 2 223,1491, 0,2086, +,+, 561368 LINE CR1 587 chr8 352897 353727 Char12Mar1_GG 683 - 352897 353727 0 2 76,477, 0,353, -,-, 561535 DNA hAT-Charlie 587 chr8 382818 383811 CR1-L3A_Croc 84 - 382818 383811 0 2 189,238, 0,755, -,-, 561562 LINE CR1 588 chr8 430855 431418 CR1-C3 607 + 430855 431418 0 2 172,366, 0,197, +,+, 561590 LINE CR1 588 chr8 449061 457409 Char12Mar1_GG 638 - 449061 457409 0 2 196,345, 0,8003, -,-, 561603 DNA hAT-Charlie 588 chr8 484027 484424 CR1-3_Croc 432 - 484027 484424 0 2 42,194, 0,203, -,-, 561627 LINE CR1 589 chr8 613529 614121 Char12Mar1_GG 620 - 613529 614121 0 2 256,250, 0,342, -,-, 561684 DNA hAT-Charlie 589 chr8 634483 634541 (ATAC)n 354 + 634483 634541 0 2 6,14, 0,44, +,+, 561692 Simple_repeat Simple_repeat 590 chr8 705845 706053 CR1-Y2_Aves 491 - 705845 706053 0 2 163,45, 0,163, -,-, 561727 LINE CR1 591 chr8 797056 797941 Char12Mar1_GG 539 - 797056 797941 0 2 251,276, 0,609, -,-, 561762 DNA hAT-Charlie 591 chr8 913522 913625 (TA)n 268 + 913522 913625 0 2 64,6, 0,97, +,+, 561822 Simple_repeat Simple_repeat 593 chr8 1079261 1079639 CR1-D2 550 - 1079261 1079639 0 2 238,105, 0,273, -,-, 561897 LINE CR1 593 chr8 1164954 1165821 Char12Mar1_GG 514 - 1164954 1165821 0 2 159,420, 0,447, -,-, 561930 DNA hAT-Charlie 596 chr8 1526906 1527726 CR1-Y2_Aves 391 + 1526906 1527726 0 2 137,581, 0,239, +,+, 562066 LINE CR1 597 chr8 1702678 1703375 CR1-C4 545 + 1702678 1703375 0 2 443,254, 0,443, +,+, 562131 LINE CR1 599 chr8 1867166 1868809 CR1-L3A_Croc 287 - 1867166 1868809 0 4 53,195,172,151, 0,158,653,1492, -,-,-,-, 562198 LINE CR1 600 chr8 1987497 1988652 Mariner1_GG 642 - 1987497 1988652 0 2 921,229, 0,926, -,-, 562254 DNA TcMar-Mariner 600 chr8 2059662 2060147 CR1-X1 327 - 2059662 2060147 0 2 196,289, 0,196, -,-, 562292 LINE CR1 601 chr8 2163661 2164358 CR1-X1 442 - 2163661 2164358 0 2 558,139, 0,558, -,-, 562334 LINE CR1 602 chr8 2246867 2247084 CR1-C2 624 + 2246867 2247084 0 2 167,50, 0,167, +,+, 562361 LINE CR1 603 chr8 2438195 2438256 A-rich 354 + 2438195 2438256 0 2 21,17, 0,44, +,+, 562437 Low_complexity Low_complexity 604 chr8 2498916 2498964 (TGTTGT)n 578 + 2498916 2498964 0 2 8,6, 0,42, +,+, 562453 Simple_repeat Simple_repeat 604 chr8 2537681 2538321 CR1-Y2_Aves 353 + 2537681 2538321 0 2 539,71, 0,569, +,+, 562475 LINE CR1 605 chr8 2659389 2659693 Charlie7_Aves 214 - 2659389 2659693 0 2 170,85, 0,219, -,-, 562534 DNA hAT-Charlie 605 chr8 2687183 2687521 CR1-X1 552 + 2687183 2687521 0 2 176,162, 0,176, +,+, 562547 LINE CR1 605 chr8 2693756 2694631 CR1-Y 691 + 2693756 2694631 0 2 600,275, 0,600, +,+, 562553 LINE CR1 606 chr8 2839801 2840648 CR1-F2 498 + 2839801 2840648 0 2 394,452, 0,395, +,+, 562633 LINE CR1 606 chr8 2870284 2870445 Char12Mar1_GG 637 - 2870284 2870445 0 2 120,41, 0,120, -,-, 562648 DNA hAT-Charlie 608 chr8 3085416 3085510 (GTTT)n 340 + 3085416 3085510 0 2 15,58, 0,36, +,+, 562764 Simple_repeat Simple_repeat 608 chr8 3130480 3131114 Char12Mar1_GG 656 - 3130480 3131114 0 2 436,120, 0,514, -,-, 562779 DNA hAT-Charlie 609 chr8 3149630 3150138 CR1-D 613 - 3149630 3150138 0 2 343,157, 0,351, -,-, 562792 LINE CR1 610 chr8 3347748 3348076 CR1-D2 668 - 3347748 3348076 0 2 105,223, 0,105, -,-, 562894 LINE CR1 610 chr8 3401685 3402243 CR1-C3 425 + 3401685 3402243 0 2 172,386, 0,172, +,+, 562913 LINE CR1 612 chr8 3579229 3579492 CR1-C 331 + 3579229 3579492 0 2 177,61, 0,202, +,+, 562968 LINE CR1 612 chr8 3640154 3640262 GGLTR5A 530 - 3640154 3640262 0 2 50,58, 0,50, -,-, 562987 LTR ERVL 613 chr8 3688468 3689218 CR1-F2 536 + 3688468 3689218 0 2 579,171, 0,579, +,+, 563003 LINE CR1 614 chr8 3892549 3895356 CR1-F2 492 - 3892549 3895356 0 2 224,308, 0,2499, -,-, 563077 LINE CR1 614 chr8 3924567 3924925 CR1-C4 683 - 3924567 3924925 0 2 58,297, 0,61, -,-, 563091 LINE CR1 617 chr8 4273593 4274529 (CATGC)n 463 + 4273593 4274529 0 3 74,55,412, 0,446,524, +,+,+, 563196 Simple_repeat Simple_repeat 621 chr8 4735927 4736084 CR1-Y1_Aves 326 - 4735927 4736084 0 2 66,91, 0,66, -,-, 563352 LINE CR1 622 chr8 4935263 4935485 REP131 204 + 4935263 4935485 0 2 139,48, 0,174, +,+, 563443 DNA? DNA? 622 chr8 4938554 4939367 CR1-L3A_Croc 272 - 4938554 4939367 0 2 311,132, 0,681, -,-, 563446 LINE CR1 622 chr8 4938865 4940516 CR1-L3B_Croc 225 - 4938865 4940516 0 3 147,94,128, 0,1304,1523, -,-,-, 563447 LINE CR1 77 chr8 5111408 5114885 GGLTR7-int 382 + 5111408 5114885 0 6 104,205,169,1142,822,639, 0,115,344,669,1811,2838, +,+,+,+,+,+, 563503 LTR ERV1 624 chr8 5157991 5158158 CR1-F2 539 + 5157991 5158158 0 2 89,78, 0,89, +,+, 563525 LINE CR1 626 chr8 5405586 5409332 CR1-F2 382 + 5405586 5409332 0 4 91,132,94,107, 0,1427,3269,3639, +,+,+,+, 563695 LINE CR1 626 chr8 5452353 5455107 CR1-D2 588 - 5452353 5455107 0 2 155,100, 0,2654, -,-, 563718 LINE CR1 626 chr8 5468514 5468939 CR1-D2 656 + 5468514 5468939 0 2 271,147, 0,278, +,+, 563731 LINE CR1 627 chr8 5538970 5540167 CR1-F2 479 - 5538970 5540167 0 3 157,76,964, 0,157,233, -,-,-, 563763 LINE CR1 627 chr8 5540861 5541544 GGERVL-B-int 413 + 5540861 5541544 0 2 421,249, 0,434, +,+, 563766 LTR ERVL 629 chr8 5859691 5860373 CR1-C4 559 + 5859691 5860373 0 2 635,47, 0,635, +,+, 563942 LINE CR1 631 chr8 6129783 6133229 GGLTR7-int 362 - 6129783 6133229 0 5 604,832,96,45,283, 0,1072,2140,2248,3163, -,-,-,-,-, 564064 LTR ERV1 631 chr8 6141227 6141378 Char12Mar1_GG 524 - 6141227 6141378 0 2 81,70, 0,81, -,-, 564068 DNA hAT-Charlie 633 chr8 6374017 6374815 CR1-F2 261 + 6374017 6374815 0 2 106,679, 0,119, +,+, 564133 LINE CR1 635 chr8 6646690 6646863 Char12Mar1_GG 578 - 6646690 6646863 0 2 52,121, 0,52, -,-, 564234 DNA hAT-Charlie 635 chr8 6664652 6665206 CR1-D2 765 + 6664652 6665206 0 2 280,274, 0,280, +,+, 564251 LINE CR1 636 chr8 6710846 6711042 CR1-C4 602 - 6710846 6711042 0 2 147,49, 0,147, -,-, 564276 LINE CR1 636 chr8 6735555 6735688 CR1-F0 530 - 6735555 6735688 0 2 82,51, 0,82, -,-, 564295 LINE CR1 636 chr8 6741396 6741774 CR1-G 86 + 6741396 6741774 0 2 147,231, 0,147, +,+, 564300 LINE CR1 637 chr8 6824170 6824524 GGLTR4A 556 + 6824170 6824524 0 2 226,103, 0,251, +,+, 564359 LTR ERVL 637 chr8 6859058 6862644 CR1-C3 659 - 6859058 6862644 0 2 132,443, 0,3143, -,-, 564372 LINE CR1 637 chr8 6893607 6893674 (CCTCGT)n 390 + 6893607 6893674 0 2 6,29, 0,38, +,+, 564393 Simple_repeat Simple_repeat 637 chr8 6894099 6894763 CR1-Y4 538 + 6894099 6894763 0 3 37,104,163, 0,65,501, +,+,+, 564396 LINE CR1 639 chr8 7159738 7160258 CR1-L3B_Croc 351 + 7159738 7160258 0 2 59,311, 0,209, +,+, 564500 LINE CR1 639 chr8 7176839 7177154 CR1-C4 534 - 7176839 7177154 0 2 262,52, 0,263, -,-, 564508 LINE CR1 639 chr8 7184585 7185013 CR1-Y2_Aves 306 - 7184585 7185013 0 2 112,96, 0,332, -,-, 564511 LINE CR1 640 chr8 7219888 7220184 CR1-X 557 - 7219888 7220184 0 2 67,184, 0,112, -,-, 564528 LINE CR1 640 chr8 7226599 7227091 CR1-L3A_Croc 280 - 7226599 7227091 0 2 85,165, 0,327, -,-, 564531 LINE CR1 642 chr8 7505563 7505821 CR1-F2 657 + 7505563 7505821 0 2 108,150, 0,108, +,+, 564658 LINE CR1 642 chr8 7547743 7547907 GGLTR8B 592 - 7547743 7547907 0 2 131,33, 0,131, -,-, 564675 LTR ERVL 642 chr8 7567886 7567970 (TTC)n 352 + 7567886 7567970 0 2 18,10, 0,74, +,+, 564684 Simple_repeat Simple_repeat 642 chr8 7582895 7584542 CR1-L3A_Croc 35 - 7582895 7584542 0 2 229,624, 0,1023, -,-, 564693 LINE CR1 643 chr8 7649186 7650852 CR1-D2 584 + 7649186 7650852 0 4 161,169,318,657, 0,161,334,1009, +,+,+,+, 564716 LINE CR1 644 chr8 7785675 7787079 CR1-F0 349 - 7785675 7787079 0 2 178,151, 0,1253, -,-, 564781 LINE CR1 644 chr8 7811492 7812388 CR1-D2 533 + 7811492 7812388 0 2 778,118, 0,778, +,+, 564798 LINE CR1 644 chr8 7817419 7818182 CR1-Y2_Aves 232 - 7817419 7818182 0 2 531,192, 0,571, -,-, 564801 LINE CR1 645 chr8 7877067 7877121 (AAGAT)n 440 + 7877067 7877121 0 2 15,9, 0,45, +,+, 564823 Simple_repeat Simple_repeat 646 chr8 8057344 8057413 (CGG)n 332 + 8057344 8057413 0 2 6,22, 0,47, +,+, 564895 Simple_repeat Simple_repeat 646 chr8 8076304 8077219 GGERVL-A-int 236 + 8076304 8077219 0 2 273,224, 0,691, +,+, 564906 LTR ERVL 646 chr8 8088615 8089526 GGERVL-A-int 227 - 8088615 8089526 0 2 224,272, 0,639, -,-, 564915 LTR ERVL 646 chr8 8098437 8099332 GGERVL-A-int 337 - 8098437 8099332 0 2 224,126, 0,769, -,-, 564921 LTR ERVL 646 chr8 8118425 8119340 GGERVL-A-int 267 - 8118425 8119340 0 2 196,219, 0,696, -,-, 564937 LTR ERVL 646 chr8 8123352 8123857 TguLTR5e 310 + 8123352 8123857 0 2 256,105, 0,400, +,+, 564940 LTR ERVL 646 chr8 8124413 8125379 CR1-X2 437 - 8124413 8125379 0 3 417,66,479, 0,421,487, -,-,-, 564942 LINE CR1 647 chr8 8131162 8132076 CR1-C4 485 - 8131162 8132076 0 2 782,132, 0,782, -,-, 564950 LINE CR1 647 chr8 8141701 8143462 GGERVL-B-int 415 + 8141701 8143462 0 3 637,575,533, 0,653,1228, +,+,+, 564964 LTR ERVL 647 chr8 8144850 8148288 TguLTR5e 475 + 8144850 8148288 0 2 126,57, 0,3381, +,+, 564966 LTR ERVL 647 chr8 8152568 8153405 CR1-C4 460 + 8152568 8153405 0 2 498,339, 0,498, +,+, 564975 LINE CR1 647 chr8 8156893 8162178 CR1-C2 264 - 8156893 8162178 0 4 669,1046,394,178, 0,1287,4080,5107, -,-,-,-, 564983 LINE CR1 647 chr8 8161579 8161979 GGLTR12C 646 - 8161579 8161979 0 2 68,332, 0,68, -,-, 564988 LTR ERVL 647 chr8 8171411 8172471 CR1-F 337 - 8171411 8172471 0 3 143,293,609, 0,151,451, -,-,-, 564997 LINE CR1 647 chr8 8189559 8190711 CR1-F2 367 + 8189559 8190711 0 2 259,627, 0,525, +,+, 565015 LINE CR1 647 chr8 8197359 8198126 GGERVL-A-int 432 + 8197359 8198126 0 2 85,213, 0,554, +,+, 565024 LTR ERVL 647 chr8 8210695 8211073 CR1-C4 416 + 8210695 8211073 0 2 206,168, 0,210, +,+, 565037 LINE CR1 647 chr8 8220877 8220965 A-rich 673 + 8220877 8220965 0 2 34,28, 0,60, +,+, 565052 Low_complexity Low_complexity 647 chr8 8238252 8241976 CR1-X2 207 + 8238252 8241976 0 4 855,793,657,176, 0,1063,2889,3548, +,+,+,+, 565062 LINE CR1 647 chr8 8255414 8256679 CR1-X1 508 + 8255414 8256679 0 2 1157,108, 0,1157, +,+, 565077 LINE CR1 648 chr8 8301829 8302613 CR1-Y2_Aves 234 + 8301829 8302613 0 2 225,223, 0,561, +,+, 565109 LINE CR1 648 chr8 8344972 8345518 CR1-X1 521 + 8344972 8345518 0 2 429,117, 0,429, +,+, 565142 LINE CR1 649 chr8 8389604 8390177 CR1-C4 696 - 8389604 8390177 0 2 244,329, 0,244, -,-, 565175 LINE CR1 649 chr8 8434141 8444466 Char12Mar1_GG 609 - 8434141 8444466 0 2 135,71, 0,10254, -,-, 565203 DNA hAT-Charlie 649 chr8 8471653 8473983 CR1-G 760 - 8471653 8473983 0 2 842,914, 0,1416, -,-, 565231 LINE CR1 649 chr8 8482862 8484540 CR1-C4 200 - 8482862 8484540 0 2 253,694, 0,984, -,-, 565244 LINE CR1 649 chr8 8500677 8501721 CR1-Y1_Aves 388 - 8500677 8501721 0 2 792,250, 0,794, -,-, 565260 LINE CR1 649 chr8 8507194 8508023 CR1-Y1_Aves 521 - 8507194 8508023 0 4 308,101,320,98, 0,308,411,731, -,-,-,-, 565266 LINE CR1 650 chr8 8519809 8519934 (TTCTA)n 380 + 8519809 8519934 0 2 20,48, 0,77, +,+, 565279 Simple_repeat Simple_repeat 650 chr8 8527012 8527574 CR1-E 380 + 8527012 8527574 0 2 277,268, 0,294, +,+, 565288 LINE CR1 650 chr8 8529782 8532016 CR1-Y2_Aves 258 + 8529782 8532016 0 2 297,781, 0,1453, +,+, 565291 LINE CR1 650 chr8 8534703 8536154 CR1-C4 564 + 8534703 8536154 0 3 1030,262,158, 0,1030,1293, +,+,+, 565296 LINE CR1 650 chr8 8542690 8545782 GGERV28_I-int 114 + 8542690 8545782 0 2 642,1979, 0,1113, +,+, 565305 LTR ERVK 650 chr8 8552272 8553627 CR1-C4 445 - 8552272 8553627 0 2 596,755, 0,600, -,-, 565314 LINE CR1 650 chr8 8554620 8557858 GGLTR5B 520 - 8554620 8557858 0 2 49,116, 0,3122, -,-, 565317 LTR ERVL 650 chr8 8566863 8567774 GGLTR12B 817 - 8566863 8567774 0 2 213,679, 0,232, -,-, 565334 LTR ERVL 650 chr8 8584928 8585398 GGLTR8A 458 + 8584928 8585398 0 2 91,375, 0,95, +,+, 565358 LTR ERVL 650 chr8 8611790 8612919 CR1-F2 494 - 8611790 8612919 0 2 251,873, 0,256, -,-, 565383 LINE CR1 650 chr8 8636858 8637212 GGLTR8B 447 + 8636858 8637212 0 2 180,171, 0,183, +,+, 565398 LTR ERVL 651 chr8 8671298 8672898 CR1-F2 580 - 8671298 8672898 0 4 824,173,52,339, 0,824,997,1261, -,-,-,-, 565435 LINE CR1 651 chr8 8673671 8673910 CR1-Y1_Aves 138 - 8673671 8673910 0 2 76,138, 0,101, -,-, 565437 LINE CR1 651 chr8 8690129 8690944 CR1-X2 239 + 8690129 8690944 0 2 581,220, 0,595, +,+, 565452 LINE CR1 651 chr8 8694078 8695432 GGLTR8B 133 - 8694078 8695432 0 2 261,313, 0,1041, -,-, 565456 LTR ERVL 651 chr8 8702015 8702378 GGLTR5A 307 + 8702015 8702378 0 2 153,104, 0,259, +,+, 565467 LTR ERVL 651 chr8 8713707 8714392 GGLTR5B 404 + 8713707 8714392 0 2 173,116, 0,569, +,+, 565488 LTR ERVL 652 chr8 8803464 8803965 GGLTR5B 424 + 8803464 8803965 0 2 122,266, 0,235, +,+, 565491 LTR ERVL 652 chr8 8808710 8809434 ENS1-int 339 + 8808710 8809434 0 2 130,207, 0,517, +,+, 565497 LTR ERVL 652 chr8 8819682 8820202 CR1-Y4 521 + 8819682 8820202 0 3 122,149,241, 0,130,279, +,+,+, 565502 LINE CR1 652 chr8 8820194 8822181 CR1-C3 579 + 8820194 8822181 0 2 121,166, 0,1821, +,+, 565503 LINE CR1 652 chr8 8880974 8881039 GA-rich 422 + 8880974 8881039 0 2 11,19, 0,46, +,+, 565551 Low_complexity Low_complexity 653 chr8 8931274 8932218 GGLTR8B 249 + 8931274 8932218 0 2 481,236, 0,708, +,+, 565603 LTR ERVL 653 chr8 8934979 8935254 CR1-Y2_Aves 393 - 8934979 8935254 0 2 182,70, 0,205, -,-, 565607 LINE CR1 653 chr8 8950776 8951989 CR1-Y2_Aves 231 - 8950776 8951989 0 2 242,869, 0,344, -,-, 565622 LINE CR1 653 chr8 8958447 8958517 (TGTT)n 334 + 8958447 8958517 0 2 10,18, 0,52, +,+, 565632 Simple_repeat Simple_repeat 653 chr8 8963721 8964362 CR1-Y2_Aves 132 + 8963721 8964362 0 2 332,271, 0,370, +,+, 565639 LINE CR1 653 chr8 8981044 8981847 CR1-Y2_Aves 314 - 8981044 8981847 0 3 114,265,392, 0,114,411, -,-,-, 565655 LINE CR1 653 chr8 8984131 8985001 CR1-Y3 492 + 8984131 8985001 0 2 318,99, 0,771, +,+, 565656 LINE CR1 653 chr8 9013094 9016337 GGLTR7-int 441 - 9013094 9016337 0 3 160,2041,66, 0,262,3177, -,-,-, 565675 LTR ERV1 653 chr8 9023637 9024675 CR1-E 376 - 9023637 9024675 0 2 247,206, 0,832, -,-, 565684 LINE CR1 653 chr8 9035050 9043499 Char12Mar1_GG 593 - 9035050 9043499 0 2 551,875, 0,7574, -,-, 565696 DNA hAT-Charlie 653 chr8 9037570 9039258 CR1-E 462 + 9037570 9039258 0 2 838,237, 0,1451, +,+, 565701 LINE CR1 654 chr8 9049977 9054854 ENS3-int 436 + 9049977 9054854 0 3 901,1234,2718, 0,905,2159, +,+,+, 565712 LTR ERVL 654 chr8 9065423 9065784 (TTCCC)n 710 + 9065423 9065784 0 2 52,91, 0,270, +,+, 565722 Simple_repeat Simple_repeat 654 chr8 9076214 9079380 CR1-Y4 519 - 9076214 9079380 0 2 356,674, 0,2492, -,-, 565732 LINE CR1 654 chr8 9112434 9114393 GGLTR12B 752 - 9112434 9114393 0 2 670,128, 0,1831, -,-, 565774 LTR ERVL 654 chr8 9125214 9126008 CR1-F2 482 + 9125214 9126008 0 2 568,226, 0,568, +,+, 565786 LINE CR1 655 chr8 9243585 9244697 GGERVL-A-int 261 + 9243585 9244697 0 3 217,80,184, 0,632,928, +,+,+, 565894 LTR ERVL 655 chr8 9244673 9246314 GGERVL-C-int 379 + 9244673 9246314 0 2 1020,560, 0,1081, +,+, 565895 LTR ERVL 655 chr8 9255749 9257229 CR1-Y3 536 - 9255749 9257229 0 2 101,1056, 0,424, -,-, 565906 LINE CR1 655 chr8 9255850 9256160 GGLTR11 674 + 9255850 9256160 0 2 62,208, 0,102, +,+, 565907 LTR ERV1 655 chr8 9284608 9285654 Char12Mar1_GG 486 - 9284608 9285654 0 2 508,528, 0,518, -,-, 565932 DNA hAT-Charlie 656 chr8 9341553 9344586 CR1-Y2_Aves 290 + 9341553 9344586 0 3 60,291,544, 0,2164,2489, +,+,+, 565976 LINE CR1 656 chr8 9367633 9368389 CR1-C4 409 + 9367633 9368389 0 2 608,144, 0,612, +,+, 565999 LINE CR1 656 chr8 9369472 9370229 CR1-Y1_Aves 374 - 9369472 9370229 0 2 255,473, 0,284, -,-, 566001 LINE CR1 656 chr8 9374935 9375016 (A)n 964 + 9374935 9375016 0 2 18,29, 0,52, +,+, 566008 Simple_repeat Simple_repeat 656 chr8 9410277 9410915 GGLTR8A 527 + 9410277 9410915 0 2 399,163, 0,475, +,+, 566042 LTR ERVL 656 chr8 9411318 9412891 CR1-C4 555 - 9411318 9412891 0 3 1106,385,45, 0,1106,1528, -,-,-, 566044 LINE CR1 10 chr8 9436923 9440467 GGERVL-A-int 894 - 9436923 9440467 0 3 528,47,2927, 0,528,617, -,-,-, 566062 LTR ERVL 657 chr8 9441127 9441343 GGLTR8B 528 + 9441127 9441343 0 2 128,71, 0,145, +,+, 566063 LTR ERVL 657 chr8 9445273 9446529 GGERVL18-int 694 + 9445273 9446529 0 2 505,751, 0,505, +,+, 566072 LTR ERVL 657 chr8 9447464 9448152 CR1-C4 480 - 9447464 9448152 0 2 74,609, 0,79, -,-, 566073 LINE CR1 657 chr8 9455808 9459217 CR1-C4 527 - 9455808 9459217 0 2 1343,1335, 0,2074, -,-, 566081 LINE CR1 657 chr8 9489419 9492003 CR1-C4 501 + 9489419 9492003 0 3 208,85,1422, 0,605,1162, +,+,+, 566115 LINE CR1 657 chr8 9497336 9498216 CR1-D2 591 - 9497336 9498216 0 3 371,414,95, 0,371,785, -,-,-, 566123 LINE CR1 657 chr8 9500293 9500902 CR1-B 458 - 9500293 9500902 0 2 164,427, 0,182, -,-, 566124 LINE CR1 657 chr8 9525500 9533001 GGERVL-B-int 743 + 9525500 9533001 0 4 219,203,1484,3706, 0,264,469,3795, +,+,+,+, 566140 LTR ERVL 657 chr8 9545899 9546324 CR1-D2 643 - 9545899 9546324 0 2 123,302, 0,123, -,-, 566148 LINE CR1 658 chr8 9613772 9614541 ENS1B-LTR 515 - 9613772 9614541 0 2 293,418, 0,351, -,-, 566189 LTR ERVL 658 chr8 9664374 9666372 GGERVL-B-int 629 + 9664374 9666372 0 2 1443,551, 0,1447, +,+, 566232 LTR ERVL 659 chr8 9707852 9708129 CR1-Y 522 + 9707852 9708129 0 2 119,149, 0,128, +,+, 566257 LINE CR1 659 chr8 9709411 9711094 CR1-D2 553 + 9709411 9711094 0 2 317,289, 0,1394, +,+, 566260 LINE CR1 659 chr8 9711260 9712129 CR1-H 745 - 9711260 9712129 0 2 599,270, 0,599, -,-, 566262 LINE CR1 659 chr8 9732573 9733588 GGERVL-B-int 785 - 9732573 9733588 0 3 485,43,485, 0,485,530, -,-,-, 566276 LTR ERVL 659 chr8 9755868 9757241 CR1-H2 603 + 9755868 9757241 0 3 526,656,191, 0,526,1182, +,+,+, 566290 LINE CR1 659 chr8 9771121 9772088 ENS1B-LTR 527 + 9771121 9772088 0 2 467,477, 0,490, +,+, 566299 LTR ERVL 659 chr8 9772635 9773217 GGLTR5A 531 + 9772635 9773217 0 2 421,97, 0,485, +,+, 566301 LTR ERVL 660 chr8 9888186 9888794 GGLTR5A 473 + 9888186 9888794 0 2 417,109, 0,499, +,+, 566355 LTR ERVL 660 chr8 9940475 9940950 CR1-Y2_Aves 204 + 9940475 9940950 0 2 70,280, 0,195, +,+, 566385 LINE CR1 661 chr8 9981488 9983495 CR1-Y4 409 - 9981488 9983495 0 2 346,1660, 0,347, -,-, 566408 LINE CR1 661 chr8 10020930 10024151 CR1-E 402 + 10020930 10024151 0 2 368,606, 0,2615, +,+, 566429 LINE CR1 661 chr8 10022429 10023456 Char12Mar1_GG 571 - 10022429 10023456 0 2 312,496, 0,531, -,-, 566433 DNA hAT-Charlie 661 chr8 10045624 10046243 GGLTR5B 328 - 10045624 10046243 0 2 200,391, 0,228, -,-, 566449 LTR ERVL 662 chr8 10104127 10105907 CR1-F2 646 - 10104127 10105907 0 2 382,1024, 0,756, -,-, 566484 LINE CR1 662 chr8 10138450 10139245 GGLTR8A 441 + 10138450 10139245 0 2 75,719, 0,76, +,+, 566499 LTR ERVL 663 chr8 10251942 10253749 CR1-D2 585 - 10251942 10253749 0 2 612,525, 0,1282, -,-, 566553 LINE CR1 663 chr8 10265865 10266993 Char12Mar1_GG 576 - 10265865 10266993 0 2 620,498, 0,630, -,-, 566562 DNA hAT-Charlie 663 chr8 10303458 10303778 GGERV10_LTR 617 + 10303458 10303778 0 2 77,160, 0,160, +,+, 566589 LTR ERVL 663 chr8 10318864 10318957 GGLTR10C2 758 . 10318864 10318957 0 2 61,32, 0,61, -,+, 566600 LTR ERVK 664 chr8 10357721 10357796 A-rich 390 + 10357721 10357796 0 2 21,26, 0,49, +,+, 566635 Low_complexity Low_complexity 664 chr8 10358417 10359593 CR1-D2 564 - 10358417 10359593 0 2 752,79, 0,1097, -,-, 566637 LINE CR1 664 chr8 10367716 10368081 CR1-D2 580 - 10367716 10368081 0 2 187,128, 0,237, -,-, 566643 LINE CR1 664 chr8 10437691 10438989 CR1-E 795 + 10437691 10438989 0 2 358,40, 0,1258, +,+, 566684 LINE CR1 664 chr8 10444206 10447781 CR1-Y2 432 + 10444206 10447781 0 2 473,217, 0,3358, +,+, 566688 LINE CR1 664 chr8 10474939 10478595 CR1-C4 449 - 10474939 10478595 0 2 478,3170, 0,486, -,-, 566707 LINE CR1 668 chr8 11008027 11008852 Sat-CR1_GG 154 + 11008027 11008852 0 2 356,304, 0,521, +,+, 566746 Satellite Satellite 669 chr8 11011460 11011866 Sat-CR1_GG 146 - 11011460 11011866 0 2 253,12, 0,394, -,-, 566753 Satellite Satellite 669 chr8 11012165 11016373 ENS3-int 602 + 11012165 11016373 0 5 779,367,614,555,407, 0,784,1161,2516,3801, +,+,+,+,+, 566757 LTR ERVL 669 chr8 11016640 11019091 GGLTR7-int 345 + 11016640 11019091 0 5 99,161,85,294,150, 0,101,876,1698,2301, +,+,+,+,+, 566761 LTR ERV1 669 chr8 11019272 11021063 GGLTR7-int 462 + 11019272 11021063 0 2 1512,206, 0,1585, +,+, 566763 LTR ERV1 669 chr8 11034835 11041229 GGERVL18-int 677 - 11034835 11041229 0 4 342,2455,2508,343, 0,346,3448,6051, -,-,-,-, 566766 LTR ERVL 669 chr8 11048830 11049697 CR1-F2 564 - 11048830 11049697 0 2 784,73, 0,794, -,-, 566772 LINE CR1 669 chr8 11065950 11067356 GGERV28_LTR 843 - 11065950 11067356 0 2 317,161, 0,1245, -,-, 566784 LTR ERVK 669 chr8 11073877 11074546 CR1-H2 843 - 11073877 11074546 0 2 273,396, 0,273, -,-, 566795 LINE CR1 669 chr8 11103521 11104487 GGLTR12A 892 + 11103521 11104487 0 2 144,632, 0,334, +,+, 566810 LTR ERVL 669 chr8 11103665 11103855 ENS1B-LTR 941 + 11103665 11103855 0 3 43,36,110, 0,43,80, +,+,+, 566811 LTR ERVL 670 chr8 11143872 11147056 CR1-X2 548 + 11143872 11147056 0 2 234,648, 0,2536, +,+, 566833 LINE CR1 670 chr8 11152991 11155385 CR1-F 522 + 11152991 11155385 0 2 128,2255, 0,139, +,+, 566841 LINE CR1 670 chr8 11187777 11190735 Char12Mar1_GG 593 - 11187777 11190735 0 2 552,63, 0,2895, -,-, 566862 DNA hAT-Charlie 670 chr8 11264620 11264711 A-rich 290 + 11264620 11264711 0 2 33,23, 0,68, +,+, 566902 Low_complexity Low_complexity 671 chr8 11311616 11312542 CR1-Y1_Aves 581 + 11311616 11312542 0 2 69,210, 0,716, +,+, 566929 LINE CR1 671 chr8 11315789 11315904 GGLTR5B 502 - 11315789 11315904 0 2 49,66, 0,49, -,-, 566931 LTR ERVL 671 chr8 11327507 11333362 GGERV10_LTR 772 - 11327507 11333362 0 4 154,48,5379,156, 0,271,319,5699, -,-,-,-, 566938 LTR ERVL 671 chr8 11339686 11340065 GGLTR5A 347 + 11339686 11340065 0 2 132,176, 0,203, +,+, 566940 LTR ERVL 671 chr8 11362829 11366931 GGERVL-A-int 698 + 11362829 11366931 0 5 565,473,2807,50,166, 0,569,1042,3886,3936, +,+,+,+,+, 566964 LTR ERVL 672 chr8 11403744 11404226 GGLTR3F2 850 + 11403744 11404226 0 2 233,223, 0,259, +,+, 566991 LTR ERVL 672 chr8 11406574 11406886 GGLTR8B 588 - 11406574 11406886 0 2 123,189, 0,123, -,-, 566993 LTR ERVL 672 chr8 11458376 11460966 GGERVL-B-int 836 - 11458376 11460966 0 4 582,1101,429,478, 0,582,1683,2112, -,-,-,-, 567035 LTR ERVL 672 chr8 11507434 11515985 Char12Mar1_GG 569 - 11507434 11515985 0 4 181,278,551,316, 0,6550,7659,8235, -,-,-,-, 567059 DNA hAT-Charlie 672 chr8 11507614 11513984 GGLTR7-int 842 - 11507614 11513984 0 3 2107,3653,609, 0,2107,5761, -,-,-, 567060 LTR ERV1 672 chr8 11524722 11530427 GGERV10_LTR 811 + 11524722 11530427 0 3 223,5351,130, 0,224,5575, +,+,+, 567068 LTR ERVL 673 chr8 11536410 11541444 GGERV10_LTR 917 + 11536410 11541444 0 2 4814,220, 0,4814, +,+, 567076 LTR ERVL 673 chr8 11571428 11572190 ENS1B-LTR 823 - 11571428 11572190 0 2 621,141, 0,621, -,-, 567098 LTR ERVL 673 chr8 11579181 11580846 CR1-B2 738 - 11579181 11580846 0 2 265,47, 0,1618, -,-, 567102 LINE CR1 673 chr8 11579370 11579808 CR1-C2 182 - 11579370 11579808 0 2 13,318, 0,120, -,-, 567103 LINE CR1 673 chr8 11594710 11596035 GGLTR3F2 706 + 11594710 11596035 0 3 213,350,406, 0,567,919, +,+,+, 567109 LTR ERVL 673 chr8 11601268 11607518 GGERVL-B-int 790 + 11601268 11607518 0 5 564,1528,1723,1860,574, 0,564,2092,3816,5676, +,+,+,+,+, 567113 LTR ERVL 673 chr8 11610008 11615813 GGERVL-B-int 795 - 11610008 11615813 0 5 132,1860,1725,1525,562, 0,132,1993,3718,5243, -,-,-,-,-, 567115 LTR ERVL 675 chr8 11800944 11801358 CR1-Y1_Aves 507 + 11800944 11801358 0 2 76,308, 0,106, +,+, 567201 LINE CR1 675 chr8 11851242 11851858 CR1-D 734 - 11851242 11851858 0 2 115,501, 0,115, -,-, 567232 LINE CR1 675 chr8 11852870 11852924 (TTAT)n 424 + 11852870 11852924 0 2 7,8, 0,46, +,+, 567233 Simple_repeat Simple_repeat 676 chr8 11947229 11947543 CR1-Y2_Aves 284 + 11947229 11947543 0 2 139,162, 0,152, +,+, 567287 LINE CR1 680 chr8 12488601 12489234 L2-1_AMi 234 + 12488601 12489234 0 2 512,83, 0,550, +,+, 567575 LINE L2 680 chr8 12496261 12496895 L2-1_AMi 234 + 12496261 12496895 0 2 512,83, 0,551, +,+, 567580 LINE L2 681 chr8 12583943 12592115 Mariner1_GG 668 - 12583943 12592115 0 2 592,232, 0,7940, -,-, 567624 DNA TcMar-Mariner 681 chr8 12611068 12611330 GGLTR5B 554 + 12611068 12611330 0 2 137,85, 0,177, +,+, 567641 LTR ERVL 681 chr8 12641267 12641884 CR1-C4 319 - 12641267 12641884 0 2 243,371, 0,246, -,-, 567659 LINE CR1 681 chr8 12711067 12712700 CR1-Y4 606 - 12711067 12712700 0 2 723,899, 0,734, -,-, 567702 LINE CR1 682 chr8 12799635 12799827 Char12Mar1_GG 624 - 12799635 12799827 0 2 60,130, 0,62, -,-, 567769 DNA hAT-Charlie 683 chr8 12877513 12878532 Mariner1_GG 600 - 12877513 12878532 0 2 538,481, 0,538, -,-, 567812 DNA TcMar-Mariner 683 chr8 12894270 12894865 UCON27 273 - 12894270 12894865 0 2 114,413, 0,182, -,-, 567824 Unknown Unknown 684 chr8 12980055 12980849 CR1-F2 519 + 12980055 12980849 0 2 84,131, 0,663, +,+, 567861 LINE CR1 685 chr8 13196241 13196279 (ATTTTT)n 498 + 13196241 13196279 0 2 13,8, 0,30, +,+, 567954 Simple_repeat Simple_repeat 686 chr8 13266887 13267296 GGERV22_LTR 552 - 13266887 13267296 0 2 191,218, 0,191, -,-, 567983 LTR ERVL 686 chr8 13347193 13347916 GGLTR12C 469 + 13347193 13347916 0 2 105,216, 0,507, +,+, 568023 LTR ERVL 695 chr8 14441928 14442032 (T)n 873 + 14441928 14442032 0 2 26,24, 0,80, +,+, 568458 Simple_repeat Simple_repeat 695 chr8 14529624 14530194 Charlie12_GG 667 - 14529624 14530194 0 2 532,38, 0,532, -,-, 568484 DNA hAT-Charlie 696 chr8 14564495 14564895 CR1-L3B_Croc 311 + 14564495 14564895 0 2 84,141, 0,259, +,+, 568497 LINE CR1 696 chr8 14571576 14572175 GGLTR5A 384 + 14571576 14572175 0 3 168,76,125, 0,289,474, +,+,+, 568502 LTR ERVL 698 chr8 14926173 14926411 CR1-X2 613 - 14926173 14926411 0 2 155,83, 0,155, -,-, 568692 LINE CR1 699 chr8 15023126 15023343 CR1-Y3 727 + 15023126 15023343 0 2 116,99, 0,118, +,+, 568748 LINE CR1 700 chr8 15132175 15133012 CR1-Y4 556 - 15132175 15133012 0 2 119,696, 0,141, -,-, 568799 LINE CR1 700 chr8 15168092 15168458 GGLTR4A 620 + 15168092 15168458 0 2 234,100, 0,266, +,+, 568807 LTR ERVL 702 chr8 15384396 15384505 (T)n 858 + 15384396 15384505 0 2 31,17, 0,92, +,+, 568903 Simple_repeat Simple_repeat 702 chr8 15434365 15434422 (ATATTTT)n 488 + 15434365 15434422 0 2 13,8, 0,49, +,+, 568936 Simple_repeat Simple_repeat 703 chr8 15549514 15550096 Mariner1b_GG 566 - 15549514 15550096 0 2 334,220, 0,362, -,-, 569016 DNA TcMar-Mariner 703 chr8 15569664 15570788 CR1-F2 486 + 15569664 15570788 0 2 195,929, 0,195, +,+, 569027 LINE CR1 703 chr8 15587121 15587625 CR1-Y2_Aves 327 + 15587121 15587625 0 2 188,302, 0,202, +,+, 569037 LINE CR1 703 chr8 15587811 15587855 (AATA)n 470 + 15587811 15587855 0 2 6,14, 0,30, +,+, 569038 Simple_repeat Simple_repeat 704 chr8 15603054 15603319 UCON8 256 - 15603054 15603319 0 2 194,44, 0,221, -,-, 569045 DNA DNA 705 chr8 15840480 15840793 Eulor2B 267 - 15840480 15840793 0 2 139,117, 0,196, -,-, 569139 DNA? DNA? 706 chr8 15950268 15950656 CR1-L3B_Croc 402 + 15950268 15950656 0 2 182,57, 0,331, +,+, 569179 LINE CR1 713 chr8 16905768 16907302 CR1-C4 587 - 16905768 16907302 0 2 1098,436, 0,1098, -,-, 569590 LINE CR1 714 chr8 17001873 17002496 Char12Mar1_GG 530 - 17001873 17002496 0 2 432,111, 0,512, -,-, 569640 DNA hAT-Charlie 715 chr8 17104480 17105386 CR1-D2 664 - 17104480 17105386 0 2 541,365, 0,541, -,-, 569685 LINE CR1 716 chr8 17231629 17233528 CR1-F2 423 - 17231629 17233528 0 3 1062,407,361, 0,1062,1538, -,-,-, 569764 LINE CR1 716 chr8 17236952 17237838 CR1-C4 532 - 17236952 17237838 0 2 557,328, 0,558, -,-, 569768 LINE CR1 718 chr8 17535589 17535859 LFSINE_Vert 415 - 17535589 17535859 0 2 89,161, 0,109, -,-, 569949 SINE tRNA 720 chr8 17727203 17728407 CR1-Y2_Aves 86 - 17727203 17728407 0 2 56,435, 0,769, -,-, 570066 LINE CR1 721 chr8 17867521 17868479 CR1-8_Crp 195 + 17867521 17868479 0 2 481,243, 0,715, +,+, 570143 LINE CR1 722 chr8 17999322 17999405 (AT)n 380 + 17999322 17999405 0 2 52,6, 0,77, +,+, 570217 Simple_repeat Simple_repeat 722 chr8 18010148 18010586 CR1-D2 506 + 18010148 18010586 0 2 139,299, 0,139, +,+, 570224 LINE CR1 722 chr8 18019969 18020236 CR1-E 476 - 18019969 18020236 0 2 12,220, 0,47, -,-, 570229 LINE CR1 722 chr8 18062112 18062171 A-rich 342 + 18062112 18062171 0 2 18,24, 0,35, +,+, 570263 Low_complexity Low_complexity 723 chr8 18121701 18122003 Chompy-7_Croc 134 - 18121701 18122003 0 2 155,147, 0,155, -,-, 570313 DNA PIF-Harbinger 723 chr8 18122333 18122440 (TCTTCTT)n 334 + 18122333 18122440 0 2 13,7, 0,100, +,+, 570315 Simple_repeat Simple_repeat 723 chr8 18185814 18187597 Charlie12_GG 412 - 18185814 18187597 0 2 264,1519, 0,264, -,-, 570370 DNA hAT-Charlie 723 chr8 18193917 18194712 CR1-C4 540 + 18193917 18194712 0 2 709,53, 0,742, +,+, 570374 LINE CR1 724 chr8 18265930 18271487 Char12Mar1_GG 513 - 18265930 18271487 0 2 360,223, 0,5334, -,-, 570436 DNA hAT-Charlie 725 chr8 18385032 18386142 Mariner1_GG 573 - 18385032 18386142 0 2 212,867, 0,243, -,-, 570530 DNA TcMar-Mariner 725 chr8 18388604 18388686 (AC)n 748 + 18388604 18388686 0 2 27,27, 0,55, +,+, 570533 Simple_repeat Simple_repeat 725 chr8 18433894 18434844 Char12Mar1_GG 540 - 18433894 18434844 0 2 347,199, 0,751, -,-, 570564 DNA hAT-Charlie 726 chr8 18514156 18515231 CR1-F2 254 - 18514156 18515231 0 2 656,417, 0,658, -,-, 570631 LINE CR1 726 chr8 18546067 18546870 CR1-C4 578 - 18546067 18546870 0 2 428,375, 0,428, -,-, 570651 LINE CR1 727 chr8 18639631 18640491 UCON8 211 - 18639631 18640491 0 2 127,346, 0,514, -,-, 570702 DNA DNA 727 chr8 18666339 18666388 (ATT)n 522 + 18666339 18666388 0 2 16,9, 0,40, +,+, 570716 Simple_repeat Simple_repeat 728 chr8 18760158 18760507 Char12Mar1_GG 534 - 18760158 18760507 0 2 168,181, 0,168, -,-, 570768 DNA hAT-Charlie 728 chr8 18825785 18825829 (AAGTAAC)n 502 + 18825785 18825829 0 2 6,13, 0,31, +,+, 570807 Simple_repeat Simple_repeat 729 chr8 18879631 18880323 CR1-L3A_Croc 170 - 18879631 18880323 0 2 300,135, 0,557, -,-, 570841 LINE CR1 731 chr8 19228083 19229150 CR1-L3A_Croc 265 - 19228083 19229150 0 2 82,350, 0,717, -,-, 570997 LINE CR1 732 chr8 19377644 19377711 (CTC)n 410 + 19377644 19377711 0 2 11,23, 0,44, +,+, 571052 Simple_repeat Simple_repeat 733 chr8 19428998 19429855 CR1-X2 508 - 19428998 19429855 0 3 241,335,274, 0,248,583, -,-,-, 571075 LINE CR1 733 chr8 19432106 19433979 CR1-L3A_Croc 293 + 19432106 19433979 0 2 503,1051, 0,822, +,+, 571078 LINE CR1 734 chr8 19532736 19533343 REP131 347 - 19532736 19533343 0 2 321,139, 0,468, -,-, 571111 DNA? DNA? 734 chr8 19607546 19607617 (AGAATAC)n 358 + 19607546 19607617 0 2 22,14, 0,57, +,+, 571143 Simple_repeat Simple_repeat 735 chr8 19671606 19672328 CR1-C4 542 + 19671606 19672328 0 2 477,245, 0,477, +,+, 571173 LINE CR1 735 chr8 19767624 19768179 CR1-11_Crp 352 - 19767624 19768179 0 2 269,78, 0,477, -,-, 571201 LINE CR1 736 chr8 19865575 19868908 CR1-L3A_Croc 194 - 19865575 19868908 0 3 283,459,119, 0,2715,3214, -,-,-, 571238 LINE CR1 736 chr8 19917676 19918347 REP131 347 - 19917676 19918347 0 2 90,72, 0,599, -,-, 571262 DNA? DNA? 737 chr8 20014071 20014558 CR1-Y1_Aves 60 + 20014071 20014558 0 2 135,307, 0,180, +,+, 571295 LINE CR1 738 chr8 20091921 20093035 CR1-L3B_Croc 160 + 20091921 20093035 0 2 310,361, 0,753, +,+, 571321 LINE CR1 739 chr8 20266172 20266737 CR1-F0 321 - 20266172 20266737 0 2 239,85, 0,480, -,-, 571367 LINE CR1 739 chr8 20272597 20273046 CR1-Y2_Aves 520 - 20272597 20273046 0 2 132,198, 0,251, -,-, 571372 LINE CR1 739 chr8 20309346 20309516 CR1-L3B_Croc 410 - 20309346 20309516 0 2 83,83, 0,87, -,-, 571395 LINE CR1 741 chr8 20562804 20562935 GA-rich 298 + 20562804 20562935 0 2 93,13, 0,118, +,+, 571529 Low_complexity Low_complexity 742 chr8 20621083 20621474 CR1-F0 431 - 20621083 20621474 0 2 238,153, 0,238, -,-, 571563 LINE CR1 743 chr8 20756304 20756354 (TCTT)n 624 + 20756304 20756354 0 2 6,9, 0,41, +,+, 571681 Simple_repeat Simple_repeat 745 chr8 21045432 21045717 CR1-F2 382 + 21045432 21045717 0 2 53,225, 0,60, +,+, 571849 LINE CR1 746 chr8 21207289 21207612 Char12Mar1_GG 463 - 21207289 21207612 0 2 160,163, 0,160, -,-, 571936 DNA hAT-Charlie 748 chr8 21481137 21481817 REP131 217 - 21481137 21481817 0 2 206,261, 0,419, -,-, 572036 DNA? DNA? 749 chr8 21526198 21527109 GGLTR5A 415 + 21526198 21527109 0 2 160,401, 0,510, +,+, 572050 LTR ERVL 749 chr8 21582222 21582338 (GCCGCCC)n 300 + 21582222 21582338 0 2 31,48, 0,68, +,+, 572088 Simple_repeat Simple_repeat 751 chr8 21778396 21778757 CR1-Y4 322 - 21778396 21778757 0 2 85,108, 0,253, -,-, 572234 LINE CR1 751 chr8 21829258 21833067 CR1-F2 306 - 21829258 21833067 0 2 138,243, 0,3566, -,-, 572277 LINE CR1 755 chr8 22352296 22354911 CR1-F2 397 + 22352296 22354911 0 2 65,122, 0,2493, +,+, 572576 LINE CR1 756 chr8 22535728 22535838 (T)n 845 + 22535728 22535838 0 2 18,65, 0,45, +,+, 572647 Simple_repeat Simple_repeat 757 chr8 22566689 22567302 CR1-D2 732 + 22566689 22567302 0 2 35,568, 0,45, +,+, 572663 LINE CR1 757 chr8 22582680 22583995 CR1-L3B_Croc 224 - 22582680 22583995 0 3 218,260,355, 0,598,960, -,-,-, 572670 LINE CR1 757 chr8 22598351 22598417 (TTTC)n 418 + 22598351 22598417 0 2 20,27, 0,39, +,+, 572674 Simple_repeat Simple_repeat 758 chr8 22780222 22780754 REP131 269 - 22780222 22780754 0 2 395,99, 0,433, -,-, 572758 DNA? DNA? 761 chr8 23156944 23157751 CR1-L3B_Croc 249 - 23156944 23157751 0 2 152,122, 0,685, -,-, 572945 LINE CR1 762 chr8 23223512 23223602 REP131 476 . 23223512 23223602 0 2 59,31, 0,59, +,-, 572980 DNA? DNA? 762 chr8 23260206 23260741 CR1-C4 618 + 23260206 23260741 0 2 420,114, 0,421, +,+, 573003 LINE CR1 763 chr8 23411645 23411729 (A)n 903 + 23411645 23411729 0 2 38,22, 0,62, +,+, 573066 Simple_repeat Simple_repeat 764 chr8 23516042 23516676 CR1-Y2_Aves 284 - 23516042 23516676 0 2 167,454, 0,180, -,-, 573136 LINE CR1 764 chr8 23545659 23546096 CR1-11_Crp 299 - 23545659 23546096 0 2 115,154, 0,283, -,-, 573157 LINE CR1 765 chr8 23644137 23644307 G-rich 511 + 23644137 23644307 0 2 82,35, 0,135, +,+, 573205 Low_complexity Low_complexity 765 chr8 23698179 23698694 CR1-Y2_Aves 129 + 23698179 23698694 0 2 196,311, 0,204, +,+, 573217 LINE CR1 769 chr8 24234906 24235212 CR1-H2 324 - 24234906 24235212 0 2 114,192, 0,114, -,-, 573425 LINE CR1 770 chr8 24328170 24328643 CR1-Y2_Aves 454 + 24328170 24328643 0 2 171,270, 0,203, +,+, 573457 LINE CR1 771 chr8 24383956 24384513 CR1-C4 668 + 24383956 24384513 0 2 241,166, 0,391, +,+, 573477 LINE CR1 771 chr8 24395572 24396042 CR1-X2 587 - 24395572 24396042 0 2 269,201, 0,269, -,-, 573481 LINE CR1 772 chr8 24560453 24563856 EAVHP_I-int 606 - 24560453 24563856 0 3 240,831,2297, 0,240,1106, -,-,-, 573545 LTR ERVK 773 chr8 24644909 24645545 CR1-E 692 - 24644909 24645545 0 2 203,429, 0,207, -,-, 573579 LINE CR1 774 chr8 24857359 24857647 CR1-X1 331 + 24857359 24857647 0 2 86,187, 0,101, +,+, 573640 LINE CR1 777 chr8 25248769 25249063 CR1-C4 513 + 25248769 25249063 0 2 197,89, 0,205, +,+, 573780 LINE CR1 780 chr8 25640386 25642967 CR1-F2 507 + 25640386 25642967 0 2 36,188, 0,2393, +,+, 573939 LINE CR1 780 chr8 25668580 25669177 CR1-F0 482 - 25668580 25669177 0 2 14,79, 0,518, -,-, 573954 LINE CR1 780 chr8 25677500 25678044 CR1-Y4 654 + 25677500 25678044 0 2 451,93, 0,451, +,+, 573959 LINE CR1 781 chr8 25710797 25710948 CR1-Y2_Aves 401 - 25710797 25710948 0 2 86,65, 0,86, -,-, 573981 LINE CR1 782 chr8 25825842 25829439 CR1-F2 494 - 25825842 25829439 0 2 83,148, 0,3449, -,-, 574054 LINE CR1 782 chr8 25902136 25902224 (T)n 1000 + 25902136 25902224 0 2 26,24, 0,64, +,+, 574101 Simple_repeat Simple_repeat 784 chr8 26105258 26105646 CR1-F2 403 + 26105258 26105646 0 2 118,210, 0,178, +,+, 574219 LINE CR1 785 chr8 26221437 26221801 UCON12 341 - 26221437 26221801 0 2 108,72, 0,292, -,-, 574275 Unknown Unknown 787 chr8 26479116 26480556 MIR_Aves1 493 + 26479116 26480556 0 2 45,54, 0,1386, +,+, 574376 SINE MIR 787 chr8 26587647 26587917 CR1-D2 612 + 26587647 26587917 0 2 79,184, 0,86, +,+, 574408 LINE CR1 789 chr8 26760191 26761284 CR1-F2 310 + 26760191 26761284 0 2 238,506, 0,587, +,+, 574476 LINE CR1 789 chr8 26792311 26792879 CR1-F0 289 + 26792311 26792879 0 2 264,296, 0,272, +,+, 574503 LINE CR1 790 chr8 26887189 26887334 UCON31 332 + 26887189 26887334 0 2 46,54, 0,91, +,+, 574568 Unknown Unknown 791 chr8 27121770 27122496 CR1-L3B_Croc 367 - 27121770 27122496 0 2 171,555, 0,171, -,-, 574674 LINE CR1 793 chr8 27366751 27366852 (A)n 770 + 27366751 27366852 0 2 37,31, 0,70, +,+, 574806 Simple_repeat Simple_repeat 795 chr8 27597860 27597956 A-rich 582 + 27597860 27597956 0 2 38,32, 0,64, +,+, 574923 Low_complexity Low_complexity 796 chr8 27729494 27730798 REP131 436 - 27729494 27730798 0 2 43,232, 0,1072, -,-, 574973 DNA? DNA? 797 chr8 27803497 27803621 Charlie12_GG 414 + 27803497 27803621 0 2 80,44, 0,80, +,+, 575009 DNA hAT-Charlie 797 chr8 27858393 27858653 Char12Mar1_GG 514 + 27858393 27858653 0 2 212,16, 0,244, +,+, 575039 DNA hAT-Charlie 798 chr8 27937717 27938034 LFSINE_Vert 421 + 27937717 27938034 0 2 65,85, 0,232, +,+, 575090 SINE tRNA 799 chr8 28143897 28144093 CR1-F2 351 + 28143897 28144093 0 2 107,66, 0,130, +,+, 575172 LINE CR1 799 chr8 28175783 28175866 (CTTT)n 358 + 28175783 28175866 0 2 31,19, 0,64, +,+, 575188 Simple_repeat Simple_repeat 802 chr8 28478672 28479423 CR1-F2 405 - 28478672 28479423 0 2 370,100, 0,651, -,-, 575312 LINE CR1 805 chr8 28923690 28924968 CR1-H2 389 - 28923690 28924968 0 2 88,185, 0,1093, -,-, 575549 LINE CR1 805 chr8 28927821 28928115 CR1-D2 480 - 28927821 28928115 0 2 207,87, 0,207, -,-, 575551 LINE CR1 805 chr8 28952173 28952397 CR1-H2 375 + 28952173 28952397 0 2 110,109, 0,115, +,+, 575568 LINE CR1 805 chr8 28953646 28954156 CR1-D2 640 - 28953646 28954156 0 2 139,370, 0,140, -,-, 575572 LINE CR1 807 chr8 29161470 29161533 (CTTT)n 336 + 29161470 29161533 0 2 24,6, 0,57, +,+, 575674 Simple_repeat Simple_repeat 807 chr8 29174851 29175291 CR1-X2 288 - 29174851 29175291 0 2 279,73, 0,367, -,-, 575681 LINE CR1 808 chr8 29301712 29302339 CR1-Y4 414 + 29301712 29302339 0 2 388,221, 0,406, +,+, 575755 LINE CR1 810 chr8 29491917 29492269 (ACATG)n 254 + 29491917 29492269 0 2 137,21, 0,331, +,+, 575848 Simple_repeat Simple_repeat 810 chr8 29501595 29501655 (CCAGCTG)n 386 + 29501595 29501655 0 2 17,14, 0,46, +,+, 575856 Simple_repeat Simple_repeat 810 chr8 29501683 29502263 CR1-D2 655 + 29501683 29502263 0 2 67,513, 0,67, +,+, 575858 LINE CR1 810 chr8 29543311 29543370 (GCTGCAG)n 358 + 29543311 29543370 0 2 14,11, 0,48, +,+, 575880 Simple_repeat Simple_repeat 810 chr8 29567438 29567984 CR1-X1 347 - 29567438 29567984 0 3 21,126,380, 0,40,166, -,-,-, 575890 LINE CR1 810 chr8 29595819 29596012 CR1-X2 464 + 29595819 29596012 0 2 70,76, 0,117, +,+, 575907 LINE CR1 812 chr8 29819675 29820459 CR1-Y1_Aves 307 - 29819675 29820459 0 2 124,642, 0,142, -,-, 576002 LINE CR1 812 chr8 29844828 29845440 CR1-Y3 709 + 29844828 29845440 0 2 369,243, 0,369, +,+, 576020 LINE CR1 812 chr8 29871308 29871994 GGLTR8B 259 + 29871308 29871994 0 2 282,397, 0,289, +,+, 576035 LTR ERVL 585 chr8_NT_461327v1_random 8493 9159 ENS1-int 345 + 8493 9159 0 2 130,207, 0,459, +,+, 576100 LTR ERVL 585 chr8_NT_461327v1_random 24366 25032 ENS1-int 347 + 24366 25032 0 2 130,104, 0,562, +,+, 576110 LTR ERVL 585 chr8_NT_461328v1_random 1519 2202 ENS1-int 347 + 1519 2202 0 2 130,104, 0,579, +,+, 576115 LTR ERVL 585 chr8_NT_461328v1_random 7584 11075 GGLTR7-int 448 + 7584 11075 0 4 60,692,1082,160, 0,1455,2147,3331, +,+,+,+, 576119 LTR ERV1 585 chr8_NT_461329v1_random 13332 13998 ENS1-int 347 + 13332 13998 0 2 130,104, 0,562, +,+, 576149 LTR ERVL 585 chr8_NT_461329v1_random 20534 22182 Z-REP 222 - 20534 22182 0 2 419,1188, 0,460, -,-, 576154 Satellite macro 585 chr8_NT_461329v1_random 21554 22904 GGLTR7-int 472 + 21554 22904 0 2 1088,160, 0,1190, +,+, 576156 LTR ERV1 585 chr8_NT_461330v1_random 4040 4951 GGERVL-A-int 232 - 4040 4951 0 2 224,273, 0,638, -,-, 576161 LTR ERVL 585 chr8_NT_461330v1_random 22812 23730 GGERVL-A-int 208 - 22812 23730 0 2 224,443, 0,475, -,-, 576175 LTR ERVL 585 chr8_NT_461331v1_random 20613 21217 CR1-Y4 465 + 20613 21217 0 2 104,168, 0,436, +,+, 576187 LINE CR1 585 chr8_NT_461332v1_random 8619 9533 GGERVL-A-int 222 + 8619 9533 0 2 272,224, 0,690, +,+, 576194 LTR ERVL 585 chr8_NT_461332v1_random 18523 19434 GGERVL-A-int 227 + 18523 19434 0 2 272,224, 0,687, +,+, 576201 LTR ERVL 585 chr8_NT_461333v1_random 7438 9360 CR1-C3 590 - 7438 9360 0 3 915,787,220, 0,915,1702, -,-,-, 576211 LINE CR1 585 chr8_NT_461333v1_random 15633 16545 GGERVL-A-int 232 - 15633 16545 0 2 224,273, 0,639, -,-, 576216 LTR ERVL 585 chr8_NT_461334v1_random 4928 5554 ENS1-int 480 + 4928 5554 0 2 99,71, 0,555, +,+, 576230 LTR ERVL 585 chr8_NT_461335v1_random 16362 17029 ENS1-int 369 + 16362 17029 0 2 130,208, 0,459, +,+, 576254 LTR ERVL 585 chr8_NT_461336v1_random 5650 6373 ENS1-int 339 + 5650 6373 0 2 130,207, 0,516, +,+, 576264 LTR ERVL 585 chr8_NT_461336v1_random 10730 11714 GGLTR5A 231 - 10730 11714 0 2 173,379, 0,605, -,-, 576266 LTR ERVL 585 chr8_NT_461336v1_random 17161 17645 GGLTR5A 444 - 17161 17645 0 2 210,238, 0,246, -,-, 576275 LTR ERVL 585 chr8_NT_461340v1_random 9395 10303 GGERVL-A-int 230 + 9395 10303 0 2 271,224, 0,684, +,+, 576326 LTR ERVL 585 chr8_NT_461341v1_random 18450 19256 GGLTR7-int 443 - 18450 19256 0 2 160,544, 0,262, -,-, 576345 LTR ERV1 585 chr8_NT_461342v1_random 8281 10570 CR1-C3 522 - 8281 10570 0 4 931,787,241,318, 0,931,1718,1971, -,-,-,-, 576354 LINE CR1 585 chr8_NT_461342v1_random 12553 13465 GGERVL-A-int 211 + 12553 13465 0 2 441,224, 0,688, +,+, 576355 LTR ERVL 585 chr8_NT_461344v1_random 12761 15048 CR1-C3 517 - 12761 15048 0 4 927,788,242,318, 0,927,1715,1969, -,-,-,-, 576378 LINE CR1 585 chr8_NT_461344v1_random 17027 17946 GGERVL-A-int 217 + 17027 17946 0 2 279,227, 0,692, +,+, 576379 LTR ERVL 585 chr8_NT_461346v1_random 6479 7145 ENS1-int 347 + 6479 7145 0 2 130,104, 0,562, +,+, 576398 LTR ERVL 585 chr8_NT_461346v1_random 13677 15996 GGLTR7-int 466 + 13677 15996 0 4 312,670,1061,79, 0,333,1003,2240, +,+,+,+, 576403 LTR ERV1 585 chr8_NT_461347v1_random 4844 5510 ENS1-int 347 + 4844 5510 0 2 130,104, 0,562, +,+, 576412 LTR ERVL 585 chr8_NT_461348v1_random 15642 16308 ENS1-int 339 - 15642 16308 0 2 207,130, 0,536, -,-, 576431 LTR ERVL 585 chr8_NT_461348v1_random 17706 18133 GGLTR5A 362 + 17706 18133 0 2 257,170, 0,257, +,+, 576434 LTR ERVL 585 chr8_NT_461349v1_random 3848 4826 GGLTR5A 239 - 3848 4826 0 2 172,376, 0,602, -,-, 576436 LTR ERVL 585 chr8_NT_461349v1_random 10264 10752 GGLTR5A 453 - 10264 10752 0 2 211,240, 0,248, -,-, 576444 LTR ERVL 585 chr8_NT_461350v1_random 3681 5970 CR1-C3 521 - 3681 5970 0 4 931,787,241,318, 0,931,1718,1971, -,-,-,-, 576461 LINE CR1 585 chr8_NT_461350v1_random 7953 8865 GGERVL-A-int 211 + 7953 8865 0 2 441,224, 0,688, +,+, 576462 LTR ERVL 585 chr8_NT_461351v1_random 11396 12119 ENS1-int 347 - 11396 12119 0 2 104,130, 0,593, -,-, 576479 LTR ERVL 585 chr8_NT_461352v1_random 9682 10405 ENS1-int 339 - 9682 10405 0 2 207,130, 0,593, -,-, 576492 LTR ERVL 585 chr8_NT_461354v1_random 11508 12853 GGLTR7-int 657 - 11508 12853 0 2 84,1082, 0,263, -,-, 576512 LTR ERV1 585 chr8_NT_461354v1_random 12227 13825 Z-REP 200 + 12227 13825 0 2 1185,377, 0,1221, +,+, 576514 Satellite macro 585 chr8_NT_461355v1_random 11321 13611 CR1-C3 519 - 11321 13611 0 4 931,787,242,318, 0,931,1718,1972, -,-,-,-, 576528 LINE CR1 585 chr8_NT_461355v1_random 15499 16331 GGERVL-A-int 318 + 15499 16331 0 2 129,224, 0,608, +,+, 576529 LTR ERVL 585 chr8_NT_461357v1_random 7942 8854 GGERVL-A-int 244 - 7942 8854 0 2 224,219, 0,693, -,-, 576550 LTR ERVL 585 chr8_NT_461358v1_random 6802 7455 ENS1-int 350 - 6802 7455 0 2 198,126, 0,527, -,-, 576555 LTR ERVL 585 chr8_NT_461362v1_random 15563 16143 GGLTR7-int 535 - 15563 16143 0 3 160,94,176, 0,264,404, -,-,-, 576595 LTR ERV1 585 chr8_NT_461363v1_random 9579 11949 GGLTR7-int 390 - 9579 11949 0 4 160,1088,560,419, 0,262,1350,1951, -,-,-,-, 576598 LTR ERV1 585 chr8_NT_461365v1_random 10606 11272 ENS1-int 347 - 10606 11272 0 2 104,130, 0,536, -,-, 576613 LTR ERVL 585 chr8_NT_461369v1_random 2734 3646 GGERVL-A-int 244 - 2734 3646 0 2 224,219, 0,693, -,-, 576640 LTR ERVL 585 chr8_NT_461369v1_random 12632 13531 GGERVL-A-int 206 - 12632 13531 0 2 223,272, 0,627, -,-, 576647 LTR ERVL 585 chr8_NT_461370v1_random 216 764 Sat-CR1_GG 168 + 216 764 0 2 128,149, 0,399, +,+, 576649 Satellite Satellite 585 chr8_NT_461370v1_random 11849 13629 ENS3-int 607 + 11849 13629 0 3 779,368,618, 0,784,1162, +,+,+, 576674 LTR ERVL 585 chr8_NT_461372v1_random 10767 11672 GGERVL-A-int 218 + 10767 11672 0 2 219,217, 0,688, +,+, 576691 LTR ERVL 585 chr8_NT_461374v1_random 8400 9263 GGERVL-A-int 174 - 8400 9263 0 2 197,262, 0,601, -,-, 576702 LTR ERVL 585 chr8_NT_461375v1_random 8761 9911 GGLTR11-int 358 + 8761 9911 0 2 221,122, 0,1028, +,+, 576711 LTR ERV1 585 chr8_NT_461376v1_random 6649 6872 CR1-H2 396 + 6649 6872 0 2 110,108, 0,115, +,+, 576714 LINE CR1 585 chr8_NT_461376v1_random 8118 8624 CR1-D2 614 - 8118 8624 0 2 137,368, 0,138, -,-, 576717 LINE CR1 585 chr8_NT_461385v1_random 7118 9489 GGLTR7-int 391 + 7118 9489 0 4 419,567,1082,160, 0,460,1027,2211, +,+,+,+, 576771 LTR ERV1 585 chr8_NT_461392v1_random 8461 9351 GGERVL-A-int 296 - 8461 9351 0 2 224,115, 0,775, -,-, 576809 LTR ERVL 585 chr8_NT_461395v1_random 9381 10046 ENS1-int 339 - 9381 10046 0 2 207,130, 0,535, -,-, 576820 LTR ERVL 585 chr8_NT_461398v1_random 7468 7921 GGLTR8A 471 - 7468 7921 0 2 358,91, 0,362, -,-, 576837 LTR ERVL 585 chr8_NT_461421v1_random 5886 6393 CR1-D2 631 + 5886 6393 0 2 367,139, 0,368, +,+, 576929 LINE CR1 585 chr8_NT_461421v1_random 7702 7863 CR1-F2 282 - 7702 7863 0 2 46,110, 0,51, -,-, 576934 LINE CR1 585 chr8_NT_461422v1_random 6334 7057 ENS1-int 347 + 6334 7057 0 2 130,104, 0,619, +,+, 576944 LTR ERVL 585 chr8_NT_461429v1_random 2962 5071 CR1-C3 505 - 2962 5071 0 4 758,786,241,316, 0,758,1544,1793, -,-,-,-, 576970 LINE CR1 585 chr8_NT_461429v1_random 7047 7840 GGERVL-A-int 181 + 7047 7840 0 2 277,109, 0,684, +,+, 576971 LTR ERVL 585 chr8_NT_461440v1_random 6808 7312 CR1-Y2_Aves 327 - 6808 7312 0 2 302,188, 0,316, -,-, 577015 LINE CR1 585 chr8_NT_461471v1_random 1380 4836 GGLTR7-int 448 + 1380 4836 0 4 59,1010,1077,157, 0,1114,2124,3299, +,+,+,+, 577109 LTR ERV1 585 chr8_NT_461500v1_random 3426 3732 CR1-H2 329 - 3426 3732 0 2 112,193, 0,113, -,-, 577173 LINE CR1 589 chr9 524639 525933 CR1-D2 721 + 524639 525933 0 2 530,430, 0,864, +,+, 577320 LINE CR1 589 chr9 529668 531743 Z-REP 610 + 529668 531743 0 2 244,1642, 0,433, +,+, 577323 Satellite macro 589 chr9 542761 548585 GGERV10_LTR 955 - 542761 548585 0 3 220,5383,220, 0,220,5604, -,-,-, 577328 LTR ERVL 589 chr9 572418 572843 CR1-Y2_Aves 197 + 572418 572843 0 2 147,184, 0,241, +,+, 577344 LINE CR1 591 chr9 858787 859280 CR1-Y2_Aves 180 + 858787 859280 0 2 226,228, 0,265, +,+, 577449 LINE CR1 593 chr9 1066472 1066739 CR1-C4 599 - 1066472 1066739 0 2 146,121, 0,146, -,-, 577550 LINE CR1 595 chr9 1310915 1311359 CR1-C4 470 + 1310915 1311359 0 2 17,320, 0,124, +,+, 577625 LINE CR1 595 chr9 1364813 1365028 GGLTR9 629 - 1364813 1365028 0 2 133,81, 0,134, -,-, 577644 LTR ERVL 595 chr9 1433415 1433516 CR1-F2 684 + 1433415 1433516 0 2 42,59, 0,42, +,+, 577675 LINE CR1 598 chr9 1718505 1718969 CR1-D 555 + 1718505 1718969 0 2 131,333, 0,131, +,+, 577789 LINE CR1 598 chr9 1718970 1719352 GGLTR5B 690 + 1718970 1719352 0 2 219,163, 0,219, +,+, 577790 LTR ERVL 598 chr9 1719352 1719967 CR1-D2 654 + 1719352 1719967 0 2 57,548, 0,67, +,+, 577791 LINE CR1 598 chr9 1788108 1788592 CR1-D2 574 + 1788108 1788592 0 2 185,294, 0,190, +,+, 577830 LINE CR1 598 chr9 1796797 1798581 CR1-C4 316 + 1796797 1798581 0 2 78,560, 0,1224, +,+, 577833 LINE CR1 598 chr9 1796875 1798017 GGLTR9 413 + 1796875 1798017 0 2 242,92, 0,1050, +,+, 577834 LTR ERVL 598 chr9 1805152 1805773 GGLTR5A 373 + 1805152 1805773 0 2 400,175, 0,446, +,+, 577838 LTR ERVL 601 chr9 2143057 2143785 CR1-D2 618 - 2143057 2143785 0 2 434,294, 0,434, -,-, 578002 LINE CR1 601 chr9 2175600 2180259 ENS1-LTR 971 + 2175600 2180259 0 3 916,2828,915, 0,916,3744, +,+,+, 578023 LTR ERVL 602 chr9 2230523 2230744 Char12Mar1_GG 798 - 2230523 2230744 0 2 34,147, 0,74, -,-, 578041 DNA hAT-Charlie 602 chr9 2299277 2299386 G-rich 465 + 2299277 2299386 0 2 40,47, 0,62, +,+, 578071 Low_complexity Low_complexity 603 chr9 2417673 2418345 CR1-X2 364 + 2417673 2418345 0 2 275,95, 0,577, +,+, 578120 LINE CR1 603 chr9 2466734 2467517 GGLTR5B 418 - 2466734 2467517 0 2 190,359, 0,424, -,-, 578152 LTR ERVL 603 chr9 2479008 2479384 GGLTR4A 699 - 2479008 2479384 0 2 117,240, 0,136, -,-, 578157 LTR ERVL 605 chr9 2661729 2664069 CR1-F2 357 + 2661729 2664069 0 2 817,1523, 0,817, +,+, 578215 LINE CR1 606 chr9 2821666 2822026 Char12Mar1_GG 663 - 2821666 2822026 0 2 143,217, 0,143, -,-, 578266 DNA hAT-Charlie 606 chr9 2867630 2869254 CR1-C4 638 + 2867630 2869254 0 2 1563,61, 0,1563, +,+, 578289 LINE CR1 607 chr9 2935194 2936682 CR1-G 733 + 2935194 2936682 0 2 149,1333, 0,155, +,+, 578323 LINE CR1 608 chr9 3126778 3127370 CR1-D 664 - 3126778 3127370 0 2 256,336, 0,256, -,-, 578423 LINE CR1 608 chr9 3130385 3132640 Charlie12_GG 499 - 3130385 3132640 0 3 529,1307,140, 0,808,2115, -,-,-, 578428 DNA hAT-Charlie 608 chr9 3136080 3137377 CR1-Y4 542 - 3136080 3137377 0 3 18,1004,224, 0,69,1073, -,-,-, 578432 LINE CR1 608 chr9 3138547 3140236 CR1-F2 453 - 3138547 3140236 0 2 1099,590, 0,1099, -,-, 578434 LINE CR1 609 chr9 3157568 3159409 CR1-F2 527 + 3157568 3159409 0 2 1034,807, 0,1034, +,+, 578442 LINE CR1 609 chr9 3162617 3163706 CR1-E 680 + 3162617 3163706 0 2 678,77, 0,1012, +,+, 578443 LINE CR1 609 chr9 3209596 3211137 CR1-C4 601 - 3209596 3211137 0 3 143,340,696, 0,505,845, -,-,-, 578466 LINE CR1 609 chr9 3218005 3219064 CR1-D2 466 + 3218005 3219064 0 2 361,70, 0,989, +,+, 578471 LINE CR1 609 chr9 3220324 3220434 GGLTR3D 776 + 3220324 3220434 0 2 57,53, 0,57, +,+, 578476 LTR ERVL 609 chr9 3245377 3245754 GGLTR6 785 + 3245377 3245754 0 2 243,106, 0,271, +,+, 578492 LTR ERVL 609 chr9 3245931 3246631 CR1-E 146 + 3245931 3246631 0 2 217,236, 0,464, +,+, 578493 LINE CR1 609 chr9 3246634 3249227 CR1-Y4 588 + 3246634 3249227 0 3 159,341,314, 0,159,2279, +,+,+, 578494 LINE CR1 610 chr9 3279480 3281377 CR1-C4 526 - 3279480 3281377 0 2 667,1219, 0,678, -,-, 578512 LINE CR1 610 chr9 3298991 3300985 CR1-D 501 - 3298991 3300985 0 2 1446,548, 0,1446, -,-, 578520 LINE CR1 610 chr9 3340287 3341261 CR1-Y3 698 + 3340287 3341261 0 2 166,808, 0,166, +,+, 578543 LINE CR1 610 chr9 3343263 3345801 CR1-F 506 - 3343263 3345801 0 2 432,2106, 0,432, -,-, 578545 LINE CR1 611 chr9 3419240 3419799 GGERVL-C-int 303 - 3419240 3419799 0 2 192,367, 0,192, -,-, 578580 LTR ERVL 611 chr9 3441167 3442704 CR1-H 746 - 3441167 3442704 0 2 776,483, 0,1054, -,-, 578586 LINE CR1 611 chr9 3443060 3443904 Sat-CR1_GG 270 - 3443060 3443904 0 2 226,281, 0,563, -,-, 578588 Satellite Satellite 611 chr9 3524009 3524750 CR1-X2 434 - 3524009 3524750 0 2 344,397, 0,344, -,-, 578620 LINE CR1 612 chr9 3566269 3567772 CR1-X2 482 - 3566269 3567772 0 2 161,224, 0,1279, -,-, 578635 LINE CR1 612 chr9 3580030 3580330 CR1-Y4 522 - 3580030 3580330 0 2 66,234, 0,66, -,-, 578639 LINE CR1 613 chr9 3737352 3737878 CR1-D2 572 - 3737352 3737878 0 2 298,228, 0,298, -,-, 578720 LINE CR1 613 chr9 3787631 3788320 CR1-Y2_Aves 97 - 3787631 3788320 0 2 261,237, 0,452, -,-, 578754 LINE CR1 614 chr9 3923889 3925100 CR1-F2 433 + 3923889 3925100 0 2 63,140, 0,1071, +,+, 578827 LINE CR1 616 chr9 4066854 4067691 CR1-D2 684 - 4066854 4067691 0 2 337,495, 0,342, -,-, 578891 LINE CR1 617 chr9 4208551 4208845 Char12Mar1_GG 705 - 4208551 4208845 0 2 186,108, 0,186, -,-, 578990 DNA hAT-Charlie 619 chr9 4482314 4482732 REP131 345 - 4482314 4482732 0 2 220,57, 0,361, -,-, 579174 DNA? DNA? 619 chr9 4568894 4573427 CR1-F2 222 + 4568894 4573427 0 2 95,193, 0,4340, +,+, 579205 LINE CR1 619 chr9 4579427 4579984 CR1-X 498 + 4579427 4579984 0 2 68,213, 0,344, +,+, 579211 LINE CR1 622 chr9 4876981 4877078 GA-rich 506 + 4876981 4877078 0 2 11,31, 0,66, +,+, 579334 Low_complexity Low_complexity 623 chr9 4983590 4985056 CR1-X2 211 - 4983590 4985056 0 2 1020,446, 0,1020, -,-, 579368 LINE CR1 624 chr9 5166441 5166755 CR1-C4 337 + 5166441 5166755 0 2 158,156, 0,158, +,+, 579436 LINE CR1 626 chr9 5404586 5405087 CR1-X2 753 - 5404586 5405087 0 2 24,424, 0,77, -,-, 579535 LINE CR1 626 chr9 5420511 5420610 (TTGTGT)n 348 + 5420511 5420610 0 2 42,15, 0,84, +,+, 579542 Simple_repeat Simple_repeat 626 chr9 5477298 5477858 CR1-F2 470 + 5477298 5477858 0 2 262,274, 0,286, +,+, 579563 LINE CR1 629 chr9 5781219 5782024 CR1-F 283 + 5781219 5782024 0 2 240,396, 0,409, +,+, 579677 LINE CR1 630 chr9 5976391 5977499 CR1-D2 445 - 5976391 5977499 0 2 806,288, 0,820, -,-, 579759 LINE CR1 631 chr9 6030118 6031089 CR1-Y1_Aves 403 + 6030118 6031089 0 2 218,654, 0,317, +,+, 579780 LINE CR1 632 chr9 6276948 6277211 CR1-X1 555 + 6276948 6277211 0 2 125,137, 0,126, +,+, 579870 LINE CR1 634 chr9 6485163 6485813 CR1-C4 571 + 6485163 6485813 0 2 280,370, 0,280, +,+, 579966 LINE CR1 636 chr9 6712017 6712064 (AAATTT)n 734 + 6712017 6712064 0 2 8,9, 0,38, +,+, 580077 Simple_repeat Simple_repeat 637 chr9 6901936 6902777 CR1-C3 511 - 6901936 6902777 0 2 152,689, 0,152, -,-, 580136 LINE CR1 638 chr9 7021092 7023845 Char12Mar1_GG 544 - 7021092 7023845 0 2 542,111, 0,2642, -,-, 580224 DNA hAT-Charlie 638 chr9 7027325 7027795 CR1-Y2_Aves 375 + 7027325 7027795 0 2 192,215, 0,255, +,+, 580229 LINE CR1 638 chr9 7051933 7052211 MIR_Aves2 304 - 7051933 7052211 0 2 122,91, 0,187, -,-, 580243 SINE MIR 639 chr9 7078259 7078385 (T)n 762 + 7078259 7078385 0 2 43,64, 0,62, +,+, 580255 Simple_repeat Simple_repeat 640 chr9 7287928 7288582 GGLTR5B 565 + 7287928 7288582 0 2 382,196, 0,458, +,+, 580360 LTR ERVL 641 chr9 7406675 7407761 Mariner1_GG 604 - 7406675 7407761 0 2 442,644, 0,442, -,-, 580423 DNA TcMar-Mariner 644 chr9 7783224 7783708 CR1-C3 505 + 7783224 7783708 0 2 168,247, 0,237, +,+, 580590 LINE CR1 644 chr9 7849124 7849678 CR1-C4 610 - 7849124 7849678 0 2 307,245, 0,309, -,-, 580614 LINE CR1 645 chr9 7915147 7915229 (GGCAGGC)n 284 + 7915147 7915229 0 2 27,12, 0,70, +,+, 580636 Simple_repeat Simple_repeat 645 chr9 7955937 7956486 CR1-F2 0 - 7955937 7956486 0 2 76,285, 0,264, -,-, 580656 LINE CR1 646 chr9 8073658 8074441 CR1-B2 608 - 8073658 8074441 0 2 214,569, 0,214, -,-, 580691 LINE CR1 646 chr9 8105724 8106076 DIRS-1_AMi 357 + 8105724 8106076 0 2 116,89, 0,263, +,+, 580697 LTR DIRS 650 chr9 8581024 8581852 CR1-Y 737 - 8581024 8581852 0 2 158,670, 0,158, -,-, 580844 LINE CR1 651 chr9 8685286 8685931 CR1-11_Crp 177 + 8685286 8685931 0 2 257,227, 0,418, +,+, 580877 LINE CR1 651 chr9 8774972 8775253 Char12Mar1_GG 533 - 8774972 8775253 0 2 117,164, 0,117, -,-, 580903 DNA hAT-Charlie 652 chr9 8873637 8873698 A-rich 361 + 8873637 8873698 0 2 39,22, 0,39, +,+, 580943 Low_complexity Low_complexity 656 chr9 9428319 9428364 (TGTT)n 542 + 9428319 9428364 0 2 7,7, 0,38, +,+, 581189 Simple_repeat Simple_repeat 657 chr9 9550514 9550722 CR1-F2 644 - 9550514 9550722 0 2 43,71, 0,137, -,-, 581250 LINE CR1 658 chr9 9671037 9671302 CR1-D2 490 - 9671037 9671302 0 2 191,74, 0,191, -,-, 581297 LINE CR1 658 chr9 9680071 9680419 CR1-L3A_Croc 212 + 9680071 9680419 0 2 118,136, 0,212, +,+, 581301 LINE CR1 659 chr9 9771075 9771487 Char12Mar1_GG 678 - 9771075 9771487 0 2 325,54, 0,358, -,-, 581341 DNA hAT-Charlie 660 chr9 9952443 9953058 CR1-C4 599 + 9952443 9953058 0 2 103,380, 0,235, +,+, 581416 LINE CR1 661 chr9 9995013 9995297 CR1-C4 577 - 9995013 9995297 0 2 66,218, 0,66, -,-, 581434 LINE CR1 661 chr9 10064861 10064923 (TTCATC)n 340 + 10064861 10064923 0 2 23,11, 0,51, +,+, 581468 Simple_repeat Simple_repeat 662 chr9 10147798 10148307 CR1-C4 699 - 10147798 10148307 0 2 180,329, 0,180, -,-, 581505 LINE CR1 662 chr9 10156364 10157352 CR1-Y1_Aves 69 - 10156364 10157352 0 2 340,648, 0,340, -,-, 581510 LINE CR1 663 chr9 10251719 10252116 Char12Mar1_GG 625 - 10251719 10252116 0 2 104,293, 0,104, -,-, 581551 DNA hAT-Charlie 666 chr9 10745656 10746734 CR1-L3B_Croc 187 + 10745656 10746734 0 2 263,170, 0,908, +,+, 581720 LINE CR1 667 chr9 10748489 10748822 CR1-11_Crp 287 + 10748489 10748822 0 2 36,136, 0,197, +,+, 581723 LINE CR1 667 chr9 10841256 10845158 CR1-D2 367 + 10841256 10845158 0 2 69,327, 0,3575, +,+, 581769 LINE CR1 668 chr9 10912888 10914119 CR1-Y2_Aves 167 - 10912888 10914119 0 2 746,440, 0,791, -,-, 581813 LINE CR1 669 chr9 11123125 11123802 GGLTR5B 564 + 11123125 11123802 0 2 215,310, 0,367, +,+, 581899 LTR ERVL 670 chr9 11207582 11208471 CR1-D2 654 - 11207582 11208471 0 2 478,411, 0,478, -,-, 581948 LINE CR1 670 chr9 11243300 11246477 CR1-F2 498 - 11243300 11246477 0 4 534,181,57,99, 0,2833,3017,3078, -,-,-,-, 581961 LINE CR1 670 chr9 11252343 11252420 (TTCATT)n 352 + 11252343 11252420 0 2 19,20, 0,57, +,+, 581964 Simple_repeat Simple_repeat 671 chr9 11365251 11365312 (T)n 811 + 11365251 11365312 0 2 21,24, 0,37, +,+, 582017 Simple_repeat Simple_repeat 672 chr9 11454973 11455188 GGERVL18-LTR 686 + 11454973 11455188 0 2 73,138, 0,77, +,+, 582071 LTR ERVL 672 chr9 11485031 11485113 (A)n 1000 + 11485031 11485113 0 2 20,18, 0,64, +,+, 582087 Simple_repeat Simple_repeat 672 chr9 11486846 11487612 GGERVL18-LTR 574 + 11486846 11487612 0 2 615,151, 0,615, +,+, 582090 LTR ERVL 673 chr9 11590364 11591249 CR1-F2 611 - 11590364 11591249 0 2 754,131, 0,754, -,-, 582144 LINE CR1 675 chr9 11827589 11828042 CR1-E 761 - 11827589 11828042 0 2 118,335, 0,118, -,-, 582228 LINE CR1 675 chr9 11900401 11900503 (AAAT)n 922 + 11900401 11900503 0 2 25,27, 0,75, +,+, 582262 Simple_repeat Simple_repeat 675 chr9 11918981 11919033 (TCCCGC)n 632 + 11918981 11919033 0 2 11,6, 0,46, +,+, 582275 Simple_repeat Simple_repeat 678 chr9 12203148 12203193 A-rich 538 + 12203148 12203193 0 2 13,13, 0,32, +,+, 582433 Low_complexity Low_complexity 678 chr9 12210991 12213459 CR1-F2 373 + 12210991 12213459 0 2 243,75, 0,2393, +,+, 582438 LINE CR1 680 chr9 12494948 12495429 CR1-Y2_Aves 187 + 12494948 12495429 0 2 252,222, 0,259, +,+, 582558 LINE CR1 681 chr9 12607154 12607534 TguLTR5e 286 - 12607154 12607534 0 2 117,156, 0,224, -,-, 582593 LTR ERVL 682 chr9 12825156 12825568 CR1-L3A_Croc 210 - 12825156 12825568 0 2 151,205, 0,207, -,-, 582664 LINE CR1 685 chr9 13178602 13178915 TguLTR5e 450 - 13178602 13178915 0 2 210,74, 0,239, -,-, 582780 LTR ERVL 687 chr9 13393326 13395606 CR1-L3A_Croc 273 - 13393326 13395606 0 4 258,69,267,115, 0,522,957,2165, -,-,-,-, 582839 LINE CR1 688 chr9 13552948 13555313 CR1-H 853 - 13552948 13555313 0 2 595,1770, 0,595, -,-, 582911 LINE CR1 690 chr9 13780239 13789966 REP131 312 - 13780239 13789966 0 2 57,214, 0,9513, -,-, 583009 DNA? DNA? 690 chr9 13874672 13875029 Char12Mar1_GG 353 - 13874672 13875029 0 2 245,109, 0,248, -,-, 583047 DNA hAT-Charlie 691 chr9 13969966 13970535 ENS3-int 233 - 13969966 13970535 0 2 173,175, 0,394, -,-, 583095 LTR ERVL 691 chr9 13973063 13976982 CR1-F2 473 + 13973063 13976982 0 2 109,88, 0,3831, +,+, 583097 LINE CR1 691 chr9 14019111 14020561 CR1-F2 607 - 14019111 14020561 0 2 91,37, 0,1413, -,-, 583126 LINE CR1 696 chr9 14570661 14571096 GGLTR5A 627 + 14570661 14571096 0 2 155,183, 0,252, +,+, 583370 LTR ERVL 697 chr9 14755621 14756618 CR1-L3B_Croc 306 + 14755621 14756618 0 2 360,547, 0,450, +,+, 583460 LINE CR1 697 chr9 14788920 14789593 CR1-L3B_Croc 187 + 14788920 14789593 0 2 164,289, 0,384, +,+, 583479 LINE CR1 698 chr9 14830677 14830770 (TC)n 758 + 14830677 14830770 0 2 39,54, 0,39, +,+, 583513 Simple_repeat Simple_repeat 698 chr9 14857359 14857839 Char12Mar1_GG 624 - 14857359 14857839 0 2 291,189, 0,291, -,-, 583538 DNA hAT-Charlie 698 chr9 14892771 14897439 CR1-F2 523 - 14892771 14897439 0 2 63,223, 0,4445, -,-, 583560 LINE CR1 699 chr9 14982882 14982958 (C)n 950 + 14982882 14982958 0 2 21,18, 0,58, +,+, 583601 Simple_repeat Simple_repeat 699 chr9 14984519 14984766 CR1-C4 636 + 14984519 14984766 0 2 175,72, 0,175, +,+, 583602 LINE CR1 699 chr9 15004137 15004221 (CTCCCC)n 308 + 15004137 15004221 0 2 15,21, 0,63, +,+, 583609 Simple_repeat Simple_repeat 701 chr9 15315059 15315107 A-rich 478 + 15315059 15315107 0 2 16,14, 0,34, +,+, 583704 Low_complexity Low_complexity 702 chr9 15361497 15362405 CR1-L3B_Croc 116 + 15361497 15362405 0 2 678,158, 0,750, +,+, 583733 LINE CR1 702 chr9 15373518 15373635 (T)n 611 + 15373518 15373635 0 2 41,41, 0,76, +,+, 583742 Simple_repeat Simple_repeat 702 chr9 15457365 15457972 CR1-L3A_Croc 220 + 15457365 15457972 0 2 105,458, 0,149, +,+, 583781 LINE CR1 703 chr9 15482802 15485069 CR1-F2 403 + 15482802 15485069 0 2 214,195, 0,2072, +,+, 583786 LINE CR1 704 chr9 15727514 15727679 CR1-Y1_Aves 384 - 15727514 15727679 0 2 69,85, 0,80, -,-, 583890 LINE CR1 706 chr9 15923968 15924040 (GGC)n 410 + 15923968 15924040 0 2 6,33, 0,39, +,+, 583960 Simple_repeat Simple_repeat 708 chr9 16139142 16139263 CR1-C2 667 - 16139142 16139263 0 2 99,22, 0,99, -,-, 584077 LINE CR1 709 chr9 16289282 16290522 CR1-D2 589 + 16289282 16290522 0 2 342,633, 0,607, +,+, 584120 LINE CR1 712 chr9 16769618 16770174 CR1-L3B_Croc 348 - 16769618 16770174 0 2 140,243, 0,313, -,-, 584284 LINE CR1 713 chr9 16801046 16801805 CR1-C4 563 + 16801046 16801805 0 2 599,160, 0,599, +,+, 584290 LINE CR1 713 chr9 16828632 16828697 (TTG)n 568 + 16828632 16828697 0 2 11,20, 0,45, +,+, 584302 Simple_repeat Simple_repeat 717 chr9 17328191 17329062 CR1-L3A_Croc 233 - 17328191 17329062 0 2 146,562, 0,309, -,-, 584534 LINE CR1 717 chr9 17345581 17346397 CR1-11_Crp 267 + 17345581 17346397 0 2 179,382, 0,434, +,+, 584548 LINE CR1 717 chr9 17411514 17412305 CR1-L3B_Croc 101 + 17411514 17412305 0 2 256,215, 0,576, +,+, 584565 LINE CR1 718 chr9 17459747 17460409 GGLTR5B 296 + 17459747 17460409 0 2 424,199, 0,463, +,+, 584579 LTR ERVL 718 chr9 17477502 17477605 (GGCAG)n 278 + 17477502 17477605 0 2 7,7, 0,96, +,+, 584588 Simple_repeat Simple_repeat 718 chr9 17477509 17477598 G-rich 380 + 17477509 17477598 0 2 23,31, 0,58, +,+, 584589 Low_complexity Low_complexity 720 chr9 17753442 17754302 CR1-11_Crp 265 + 17753442 17754302 0 2 270,261, 0,599, +,+, 584677 LINE CR1 721 chr9 17837642 17837979 CR1-Y1_Aves 417 + 17837642 17837979 0 2 189,148, 0,189, +,+, 584713 LINE CR1 722 chr9 18035060 18036125 CR1-11_Crp 136 + 18035060 18036125 0 2 416,464, 0,601, +,+, 584796 LINE CR1 724 chr9 18328825 18328906 (CA)n 382 + 18328825 18328906 0 2 8,26, 0,55, +,+, 584893 Simple_repeat Simple_repeat 725 chr9 18389926 18390044 A-rich 590 + 18389926 18390044 0 2 39,44, 0,74, +,+, 584917 Low_complexity Low_complexity 725 chr9 18436935 18437192 CR1-F 338 + 18436935 18437192 0 2 74,138, 0,119, +,+, 584938 LINE CR1 729 chr9 18958193 18959836 CR1-L3A_Croc 258 + 18958193 18959836 0 4 174,291,77,347, 0,539,1195,1296, +,+,+,+, 585158 LINE CR1 732 chr9 19347266 19347948 GGLTR5B 634 - 19347266 19347948 0 2 80,452, 0,230, -,-, 585302 LTR ERVL 732 chr9 19378199 19378690 CR1-C4 556 + 19378199 19378690 0 2 419,72, 0,419, +,+, 585312 LINE CR1 738 chr9 20141743 20142184 UCON64 321 + 20141743 20142184 0 2 69,180, 0,261, +,+, 585586 Unknown Unknown 739 chr9 20220839 20221008 (TTCCCTT)n 634 + 20220839 20221008 0 2 68,9, 0,160, +,+, 585615 Simple_repeat Simple_repeat 739 chr9 20258651 20258899 CR1-Y4 725 + 20258651 20258899 0 2 39,209, 0,39, +,+, 585631 LINE CR1 739 chr9 20271437 20271899 CR1-11_Crp 174 - 20271437 20271899 0 2 273,104, 0,358, -,-, 585640 LINE CR1 745 chr9 21068353 21068417 (ATGT)n 378 + 21068353 21068417 0 2 21,12, 0,52, +,+, 585992 Simple_repeat Simple_repeat 749 chr9 21623565 21623615 (TTCT)n 516 + 21623565 21623615 0 2 12,6, 0,44, +,+, 586292 Simple_repeat Simple_repeat 750 chr9 21671894 21671959 (TTG)n 418 + 21671894 21671959 0 2 23,12, 0,53, +,+, 586313 Simple_repeat Simple_repeat 750 chr9 21674728 21675274 CR1-X 315 - 21674728 21675274 0 2 387,156, 0,390, -,-, 586317 LINE CR1 751 chr9 21832328 21837548 UCON1 122 - 21832328 21837548 0 2 247,244, 0,4976, -,-, 586392 Unknown Unknown 752 chr9 21946812 21947187 CR1-Y2_Aves 373 - 21946812 21947187 0 2 146,139, 0,236, -,-, 586440 LINE CR1 752 chr9 21993659 21994311 CR1-11_Crp 199 - 21993659 21994311 0 2 200,436, 0,216, -,-, 586453 LINE CR1 754 chr9 22153878 22157861 CR1-Y2_Aves 235 - 22153878 22157861 0 3 168,103,112, 0,168,3871, -,-,-, 586499 LINE CR1 755 chr9 22352394 22352829 CR1-Y4 557 + 22352394 22352829 0 2 321,114, 0,321, +,+, 586573 LINE CR1 755 chr9 22378703 22380960 CR1-H 235 - 22378703 22380960 0 2 226,147, 0,2110, -,-, 586597 LINE CR1 755 chr9 22385015 22385107 CR1-C4 661 + 22385015 22385107 0 2 48,44, 0,48, +,+, 586605 LINE CR1 755 chr9 22393120 22393212 CR1-C4 695 - 22393120 22393212 0 2 49,42, 0,50, -,-, 586615 LINE CR1 756 chr9 22454580 22458810 CR1-F2 501 + 22454580 22458810 0 2 121,54, 0,4176, +,+, 586660 LINE CR1 758 chr9 22705643 22705954 CR1-Y 610 - 22705643 22705954 0 2 54,85, 0,226, -,-, 586749 LINE CR1 766 chr9 23760481 23771360 CR1-F0 459 + 23760481 23771360 0 2 81,63, 0,10816, +,+, 587160 LINE CR1 766 chr9 23760490 23761701 CR1-F2 253 + 23760490 23761701 0 3 282,235,535, 0,386,676, +,+,+, 587161 LINE CR1 767 chr9 23865616 23865978 CR1-X2 422 - 23865616 23865978 0 2 164,181, 0,181, -,-, 587204 LINE CR1 767 chr9 23871787 23873560 CR1-E 607 + 23871787 23873560 0 2 1691,82, 0,1691, +,+, 587209 LINE CR1 767 chr9 23985381 23985824 GGERVL-A-int 472 + 23985381 23985824 0 2 138,236, 0,207, +,+, 587280 LTR ERVL 768 chr9 24089216 24090366 GGLTR7-int 46 + 24089216 24090366 0 2 243,879, 0,271, +,+, 587332 LTR ERV1 585 chr9_NT_461576v1_random 4042 4113 (CCCTCC)n 388 + 4042 4113 0 2 32,9, 0,62, +,+, 587342 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 6204 6277 (TCCC)n 546 + 6204 6277 0 2 32,6, 0,67, +,+, 587346 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 10546 10617 (CCCTCC)n 388 + 10546 10617 0 2 32,9, 0,62, +,+, 587354 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 14882 14954 (CCCTCC)n 396 + 14882 14954 0 2 32,6, 0,66, +,+, 587361 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 21394 21485 (CTCCCT)n 376 + 21394 21485 0 2 53,9, 0,82, +,+, 587372 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 23581 23652 (CCCTCC)n 388 + 23581 23652 0 2 32,9, 0,62, +,+, 587376 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 25745 25816 (CCCTCC)n 388 + 25745 25816 0 2 32,9, 0,62, +,+, 587379 Simple_repeat Simple_repeat 585 chr9_NT_461576v1_random 36603 36675 (CCCTCC)n 396 + 36603 36675 0 2 32,6, 0,66, +,+, 587397 Simple_repeat Simple_repeat 585 chr9_NT_461578v1_random 2950 3187 CR1-C4 552 + 2950 3187 0 2 178,59, 0,178, +,+, 587418 LINE CR1 585 chr9_NT_461579v1_random 9461 9549 (CTCCCT)n 308 + 9461 9549 0 2 51,7, 0,81, +,+, 587443 Simple_repeat Simple_repeat 585 chr9_NT_461579v1_random 11401 11503 (CTCCCT)n 286 + 11401 11503 0 2 55,7, 0,95, +,+, 587446 Simple_repeat Simple_repeat 585 chr9_NT_461579v1_random 24334 24393 (CTC)n 336 + 24334 24393 0 2 15,6, 0,53, +,+, 587472 Simple_repeat Simple_repeat 585 chr9_NT_461580v1_random 2036 2130 (CCTC)n 354 + 2036 2130 0 2 47,7, 0,87, +,+, 587480 Simple_repeat Simple_repeat 585 chr9_NT_461580v1_random 4265 4319 (TCCC)n 570 + 4265 4319 0 2 15,6, 0,48, +,+, 587485 Simple_repeat Simple_repeat 585 chr9_NT_461580v1_random 10800 10872 (CCCTCC)n 396 + 10800 10872 0 2 32,6, 0,66, +,+, 587499 Simple_repeat Simple_repeat 585 chr9_NT_461580v1_random 13007 13056 (TCCC)n 490 + 13007 13056 0 2 8,6, 0,43, +,+, 587505 Simple_repeat Simple_repeat 585 chr9_NT_461580v1_random 17356 17429 (TCCC)n 546 + 17356 17429 0 2 32,6, 0,67, +,+, 587516 Simple_repeat Simple_repeat 585 chr9_NT_461580v1_random 19510 19599 (CCTC)n 396 + 19510 19599 0 2 45,6, 0,83, +,+, 587521 Simple_repeat Simple_repeat 585 chr9_NT_461581v1_random 5485 5792 CR1-C4 692 - 5485 5792 0 2 46,233, 0,74, -,-, 587527 LINE CR1 585 chr9_NT_461582v1_random 5311 5405 (CTCCCT)n 310 + 5311 5405 0 2 53,8, 0,86, +,+, 587544 Simple_repeat Simple_repeat 585 chr9_NT_461582v1_random 11843 11919 (TCCC)n 578 + 11843 11919 0 2 25,6, 0,70, +,+, 587553 Simple_repeat Simple_repeat 585 chr9_NT_461582v1_random 16169 16269 (CCTC)n 354 + 16169 16269 0 2 39,31, 0,69, +,+, 587562 Simple_repeat Simple_repeat 585 chr9_NT_461589v1_random 8269 8354 (CTCCCT)n 294 + 8269 8354 0 2 44,7, 0,78, +,+, 587638 Simple_repeat Simple_repeat 585 chr9_NT_461589v1_random 10423 10514 (CTCCCT)n 264 + 10423 10514 0 2 52,7, 0,84, +,+, 587642 Simple_repeat Simple_repeat 585 chr9_NT_461589v1_random 14718 14814 (CTCCCT)n 304 + 14718 14814 0 2 61,7, 0,89, +,+, 587653 Simple_repeat Simple_repeat 585 chr9_NT_461590v1_random 3056 5594 CR1-F 505 + 3056 5594 0 2 2111,427, 0,2111, +,+, 587659 LINE CR1 585 chr9_NT_461592v1_random 2938 2977 (TCCC)n 558 + 2938 2977 0 2 16,6, 0,33, +,+, 587678 Simple_repeat Simple_repeat 585 chr9_NT_461592v1_random 11395 11486 (CTCCCT)n 346 + 11395 11486 0 2 52,7, 0,84, +,+, 587695 Simple_repeat Simple_repeat 585 chr9_NT_461592v1_random 13545 13634 (CTCCCT)n 306 + 13545 13634 0 2 44,7, 0,82, +,+, 587699 Simple_repeat Simple_repeat 585 chr9_NT_461598v1_random 5082 10896 GGERV10_LTR 968 - 5082 10896 0 3 219,5374,220, 0,219,5594, -,-,-, 587728 LTR ERVL 585 chr9_NT_461602v1_random 9521 10581 CR1-F2 420 - 9521 10581 0 2 659,401, 0,659, -,-, 587749 LINE CR1 585 chr9_NT_461604v1_random 4659 5487 CR1-Y 737 - 4659 5487 0 2 158,670, 0,158, -,-, 587760 LINE CR1 585 chr9_NT_461610v1_random 6214 6302 (CTCCCT)n 356 + 6214 6302 0 2 45,7, 0,81, +,+, 587790 Simple_repeat Simple_repeat 585 chr9_NT_461619v1_random 3166 3255 (CTCCCT)n 268 + 3166 3255 0 2 53,7, 0,82, +,+, 587830 Simple_repeat Simple_repeat 585 chr9_NT_461623v1_random 3650 3710 (T)n 808 + 3650 3710 0 2 20,24, 0,36, +,+, 587862 Simple_repeat Simple_repeat 585 chr9_NT_461631v1_random 4112 4196 (CCTC)n 378 + 4112 4196 0 2 44,7, 0,77, +,+, 587889 Simple_repeat Simple_repeat 585 chr9_NT_461637v1_random 3854 4266 CR1-L3A_Croc 210 + 3854 4266 0 2 205,151, 0,261, +,+, 587914 LINE CR1 585 chr9_NT_461689v1_random 2416 2550 CR1-Y1_Aves 395 - 2416 2550 0 2 51,59, 0,75, -,-, 588035 LINE CR1 586 chrLGE64 210707 210797 (TTTTAA)n 588 + 210707 210797 0 2 7,21, 0,69, +,+, 588227 Simple_repeat Simple_repeat 586 chrLGE64 220161 220773 CR1-X 502 - 220161 220773 0 2 97,200, 0,412, -,-, 588242 LINE CR1 586 chrLGE64 223385 223738 CR1-Y4 606 + 223385 223738 0 2 83,270, 0,83, +,+, 588244 LINE CR1 586 chrLGE64 224281 225071 CR1-F 374 + 224281 225071 0 2 467,323, 0,467, +,+, 588245 LINE CR1 586 chrLGE64 229937 230363 GGLTR5A 307 - 229937 230363 0 2 269,142, 0,284, -,-, 588249 LTR ERVL 586 chrLGE64 237241 237928 CR1-H 692 + 237241 237928 0 2 172,508, 0,179, +,+, 588255 LINE CR1 586 chrLGE64 257232 257586 CR1-Y4 600 + 257232 257586 0 2 83,271, 0,83, +,+, 588278 LINE CR1 586 chrLGE64 258130 258920 CR1-G 380 + 258130 258920 0 2 467,323, 0,467, +,+, 588279 LINE CR1 586 chrLGE64 261353 261718 CR1-Y4 531 + 261353 261718 0 2 82,282, 0,83, +,+, 588281 LINE CR1 587 chrLGE64 266610 267040 GGLTR5A 332 - 266610 267040 0 2 269,146, 0,284, -,-, 588286 LTR ERVL 587 chrLGE64 268810 269233 GGLTR5A 298 - 268810 269233 0 2 269,139, 0,284, -,-, 588288 LTR ERVL 587 chrLGE64 279618 282820 CR1-C 494 + 279618 282820 0 2 85,653, 0,2549, +,+, 588299 LINE CR1 587 chrLGE64 286816 287606 CR1-G 374 + 286816 287606 0 2 467,323, 0,467, +,+, 588305 LINE CR1 587 chrLGE64 290054 290406 CR1-Y4 424 + 290054 290406 0 2 70,279, 0,73, +,+, 588306 LINE CR1 587 chrLGE64 293302 293667 CR1-Y4 543 + 293302 293667 0 2 82,280, 0,85, +,+, 588308 LINE CR1 587 chrLGE64 296562 296914 CR1-Y4 424 + 296562 296914 0 2 70,279, 0,73, +,+, 588310 LINE CR1 587 chrLGE64 299810 300175 CR1-Y4 537 + 299810 300175 0 2 82,282, 0,83, +,+, 588312 LINE CR1 587 chrLGE64 305430 305853 GGLTR5A 297 - 305430 305853 0 2 269,139, 0,284, -,-, 588316 LTR ERVL 587 chrLGE64 307173 307596 GGLTR5A 297 - 307173 307596 0 2 269,139, 0,284, -,-, 588317 LTR ERVL 587 chrLGE64 308915 309338 GGLTR5A 297 - 308915 309338 0 2 269,139, 0,284, -,-, 588318 LTR ERVL 587 chrLGE64 310658 311081 GGLTR5A 297 - 310658 311081 0 2 269,139, 0,284, -,-, 588319 LTR ERVL 587 chrLGE64 312401 312824 GGLTR5A 297 - 312401 312824 0 2 269,139, 0,284, -,-, 588320 LTR ERVL 587 chrLGE64 325746 326433 CR1-H 680 + 325746 326433 0 2 182,505, 0,182, +,+, 588333 LINE CR1 587 chrLGE64 356847 357763 CR1-E 714 + 356847 357763 0 2 545,371, 0,545, +,+, 588362 LINE CR1 587 chrLGE64 372552 374069 CR1-E 477 + 372552 374069 0 3 474,136,104, 0,1277,1413, +,+,+, 588374 LINE CR1 587 chrLGE64 372956 373643 CR1-E 671 + 372956 373643 0 3 76,476,135, 0,76,552, +,+,+, 588375 LINE CR1 587 chrLGE64 376551 377155 CR1-C4 533 - 376551 377155 0 2 535,65, 0,539, -,-, 588378 LINE CR1 588 chrLGE64 420024 420489 CR1-F2 518 - 420024 420489 0 2 257,208, 0,257, -,-, 588403 LINE CR1 588 chrLGE64 420762 421311 CR1-D2 735 - 420762 421311 0 2 283,265, 0,284, -,-, 588405 LINE CR1 588 chrLGE64 428556 428977 CR1-C4 518 - 428556 428977 0 2 177,137, 0,284, -,-, 588416 LINE CR1 588 chrLGE64 441704 442227 GGLTR5A 397 + 441704 442227 0 2 335,124, 0,399, +,+, 588420 LTR ERVL 588 chrLGE64 445798 446221 CR1-F2 582 - 445798 446221 0 2 224,199, 0,224, -,-, 588426 LINE CR1 588 chrLGE64 446494 447046 CR1-D2 721 - 446494 447046 0 2 283,268, 0,284, -,-, 588427 LINE CR1 588 chrLGE64 453747 454461 CR1-C4 536 - 453747 454461 0 2 177,339, 0,375, -,-, 588437 LINE CR1 588 chrLGE64 505322 505795 CR1-F2 569 - 505322 505795 0 2 268,205, 0,268, -,-, 588468 LINE CR1 588 chrLGE64 506071 506620 CR1-D2 730 - 506071 506620 0 2 283,265, 0,284, -,-, 588470 LINE CR1 588 chrLGE64 520143 520417 CR1-D2 310 - 520143 520417 0 2 192,45, 0,229, -,-, 588487 LINE CR1 589 chrLGE64 544084 544607 GGLTR5A 441 + 544084 544607 0 2 335,136, 0,387, +,+, 588498 LTR ERVL 589 chrLGE64 548157 548633 CR1-F2 547 - 548157 548633 0 2 268,208, 0,268, -,-, 588507 LINE CR1 589 chrLGE64 548906 549455 CR1-D2 745 - 548906 549455 0 2 283,265, 0,284, -,-, 588509 LINE CR1 589 chrLGE64 549927 550048 (TAGA)n 392 + 549927 550048 0 2 21,52, 0,69, +,+, 588510 Simple_repeat Simple_repeat 589 chrLGE64 556276 556933 CR1-Y2 516 - 556276 556933 0 2 177,355, 0,302, -,-, 588520 LINE CR1 589 chrLGE64 583620 584169 CR1-D2 724 - 583620 584169 0 2 283,265, 0,284, -,-, 588545 LINE CR1 589 chrLGE64 591545 592176 CR1-C4 549 - 591545 592176 0 2 177,319, 0,312, -,-, 588555 LINE CR1 589 chrLGE64 602094 602528 Char12Mar1_GG 576 - 602094 602528 0 2 307,63, 0,371, -,-, 588568 DNA hAT-Charlie 589 chrLGE64 618054 619213 Char12Mar1_GG 546 - 618054 619213 0 2 1083,69, 0,1090, -,-, 588587 DNA hAT-Charlie 589 chrLGE64 619518 619598 GA-rich 334 + 619518 619598 0 2 12,31, 0,49, +,+, 588588 Low_complexity Low_complexity 589 chrLGE64 650107 654095 CR1-F0 571 + 650107 654095 0 3 266,237,640, 0,266,3348, +,+,+, 588616 LINE CR1 589 chrLGE64 650529 651320 CR1-C 847 - 650529 651320 0 2 723,68, 0,723, -,-, 588617 LINE CR1 590 chrLGE64 670884 671845 CR1-X2 446 + 670884 671845 0 2 224,345, 0,616, +,+, 588638 LINE CR1 590 chrLGE64 672818 675301 CR1-Y4 615 - 672818 675301 0 3 375,793,58, 0,942,2425, -,-,-, 588640 LINE CR1 590 chrLGE64 679913 680010 CR1-C3 697 - 679913 680010 0 2 53,38, 0,59, -,-, 588647 LINE CR1 590 chrLGE64 684573 685523 Char12Mar1_GG 581 - 684573 685523 0 2 689,261, 0,689, -,-, 588650 DNA hAT-Charlie 590 chrLGE64 700674 700972 CR1-D2 476 - 700674 700972 0 2 248,18, 0,280, -,-, 588658 LINE CR1 590 chrLGE64 710468 710858 CR1-E 691 + 710468 710858 0 2 181,208, 0,182, +,+, 588667 LINE CR1 590 chrLGE64 738654 742704 CR1-D2 414 + 738654 742704 0 3 268,198,23, 0,3774,4027, +,+,+, 588697 LINE CR1 590 chrLGE64 744252 745569 CR1-Y4 510 - 744252 745569 0 2 107,432, 0,885, -,-, 588701 LINE CR1 590 chrLGE64 757667 759675 CR1-Y1_Aves 379 + 757667 759675 0 2 289,620, 0,1388, +,+, 588719 LINE CR1 590 chrLGE64 763277 764432 GGLTR11-int 187 - 763277 764432 0 3 227,393,207, 0,365,948, -,-,-, 588725 LTR ERV1 591 chrLGE64 788489 789086 (ACCCATTGGG)n 369 + 788489 789086 0 5 111,67,114,122,94, 0,136,214,356,503, +,+,+,+,+, 588750 Satellite Satellite 591 chrLGE64 824224 825288 CR1-C4 550 + 824224 825288 0 2 847,214, 0,850, +,+, 588774 LINE CR1 591 chrLGE64 825417 827036 CR1-F2 505 + 825417 827036 0 2 1089,475, 0,1144, +,+, 588775 LINE CR1 591 chrLGE64 835950 837167 GGLTR11 627 + 835950 837167 0 3 357,289,219, 0,357,998, +,+,+, 588782 LTR ERV1 591 chrLGE64 847521 848739 GGLTR11 622 + 847521 848739 0 3 359,289,218, 0,359,1000, +,+,+, 588791 LTR ERV1 591 chrLGE64 856367 857228 GGLTR11 650 + 856367 857228 0 2 288,222, 0,639, +,+, 588798 LTR ERV1 591 chrLGE64 867193 869211 GGLTR11-int 785 + 867193 869211 0 3 1528,12,404, 0,1581,1614, +,+,+, 588810 LTR ERV1 591 chrLGE64 870083 872377 GGERV28_I-int 249 - 870083 872377 0 4 702,111,259,88, 0,988,1872,2206, -,-,-,-, 588814 LTR ERVK 591 chrLGE64 872393 873858 GGLTR7A 885 - 872393 873858 0 2 855,610, 0,855, -,-, 588816 LTR ERV1 585 chrLGE64_NT_464104v1_random 2303 2970 CR1-Y2 533 + 2303 2970 0 2 355,177, 0,490, +,+, 588820 LINE CR1 585 chrLGE64_NT_464104v1_random 9009 9133 (TCTA)n 360 + 9009 9133 0 2 55,24, 0,100, +,+, 588827 Simple_repeat Simple_repeat 585 chrLGE64_NT_464104v1_random 9838 10385 CR1-D2 718 + 9838 10385 0 2 263,283, 0,264, +,+, 588829 LINE CR1 585 chrLGE64_NT_464104v1_random 17455 17978 GGLTR5A 438 - 17455 17978 0 2 136,335, 0,188, -,-, 588843 LTR ERVL 585 chrLGE64_NT_464104v1_random 39290 39915 CR1-C4 532 + 39290 39915 0 2 335,177, 0,448, +,+, 588854 LINE CR1 585 chrLGE64_NT_464105v1_random 646 1166 CR1-D2 624 - 646 1166 0 2 268,247, 0,273, -,-, 588866 LINE CR1 585 chrLGE64_NT_464105v1_random 8534 9156 CR1-C4 531 - 8534 9156 0 2 175,334, 0,288, -,-, 588878 LINE CR1 585 chrLGE64_NT_464106v1_random 10709 11232 GGLTR5A 438 + 10709 11232 0 2 335,136, 0,387, +,+, 588895 LTR ERVL 585 chrLGE64_NT_464106v1_random 14846 15320 CR1-F2 582 - 14846 15320 0 2 216,226, 0,248, -,-, 588903 LINE CR1 585 chrLGE64_NT_464106v1_random 15593 16142 CR1-D2 735 - 15593 16142 0 2 283,265, 0,284, -,-, 588905 LINE CR1 585 chrLGE64_NT_464106v1_random 23533 24164 CR1-C4 558 - 23533 24164 0 2 177,319, 0,312, -,-, 588916 LINE CR1 585 chrLGE64_NT_464107v1_random 4253 5471 GGLTR11 694 + 4253 5471 0 4 234,97,289,218, 0,262,359,1000, +,+,+,+, 588930 LTR ERV1 585 chrLGE64_NT_464107v1_random 16483 17703 GGLTR11 623 + 16483 17703 0 3 360,289,219, 0,360,1001, +,+,+, 588939 LTR ERV1 585 chrLGE64_NT_464108v1_random 9468 10687 GGLTR11 625 + 9468 10687 0 3 359,289,219, 0,359,1000, +,+,+, 588950 LTR ERV1 585 chrLGE64_NT_464109v1_random 2362 3581 GGLTR11 625 - 2362 3581 0 3 219,305,343, 0,571,876, -,-,-, 588964 LTR ERV1 585 chrLGE64_NT_464109v1_random 13937 15156 GGLTR11 696 - 13937 15156 0 4 219,305,81,234, 0,571,876,985, -,-,-,-, 588973 LTR ERV1 585 chrLGE64_NT_464110v1_random 10302 11521 GGLTR11 625 + 10302 11521 0 3 359,289,219, 0,359,1000, +,+,+, 588984 LTR ERV1 585 chrLGE64_NT_464111v1_random 1558 2775 GGLTR11 622 - 1558 2775 0 3 217,305,343, 0,569,874, -,-,-, 588992 LTR ERV1 585 chrLGE64_NT_464111v1_random 13771 14602 GGLTR11 478 - 13771 14602 0 2 217,313, 0,518, -,-, 589001 LTR ERV1 585 chrLGE64_NT_464111v1_random 14676 16373 CR1-F 745 - 14676 16373 0 2 1387,264, 0,1433, -,-, 589002 LINE CR1 585 chrLGE64_NT_464112v1_random 10646 11008 CR1-Y4 611 + 10646 11008 0 2 83,279, 0,83, +,+, 589016 LINE CR1 585 chrLGE64_NT_464112v1_random 11546 12336 CR1-F 372 + 11546 12336 0 2 467,323, 0,467, +,+, 589017 LINE CR1 585 chrLGE64_NT_464113v1_random 5300 6519 GGLTR11 696 + 5300 6519 0 4 234,97,289,219, 0,262,359,1000, +,+,+,+, 589023 LTR ERV1 585 chrLGE64_NT_464114v1_random 6514 7660 GGLTR11 636 - 6514 7660 0 4 168,287,79,235, 0,517,804,911, -,-,-,-, 589037 LTR ERV1 585 chrLGE64_NT_464115v1_random 4974 5098 CR1-D 676 - 4974 5098 0 2 61,63, 0,61, -,-, 589041 LINE CR1 585 chrUn_NT_464122v1 6224 6549 GGERV10_LTR 618 + 6224 6549 0 2 74,160, 0,165, +,+, 589076 LTR ERVL 585 chrUn_NT_464122v1 13393 14243 CR1-Y2_Aves 267 + 13393 14243 0 3 241,167,381, 0,259,469, +,+,+, 589081 LINE CR1 585 chrUn_NT_464122v1 35032 35868 CR1-Y2_Aves 305 + 35032 35868 0 2 108,635, 0,201, +,+, 589093 LINE CR1 585 chrUn_NT_464122v1 62982 64039 CR1-Y2_Aves 239 - 62982 64039 0 2 534,479, 0,578, -,-, 589110 LINE CR1 585 chrUn_NT_464122v1 94380 95118 CR1-Y2_Aves 248 + 94380 95118 0 2 329,394, 0,344, +,+, 589123 LINE CR1 585 chrUn_NT_464122v1 126873 127776 CR1-Y2_Aves 357 + 126873 127776 0 2 337,565, 0,338, +,+, 589147 LINE CR1 586 chrUn_NT_464122v1 135051 137345 GGERVL-C-int 745 - 135051 137345 0 3 557,915,822, 0,557,1472, -,-,-, 589156 LTR ERVL 586 chrUn_NT_464122v1 160729 161834 CR1-Y2_Aves 233 - 160729 161834 0 2 570,533, 0,572, -,-, 589177 LINE CR1 586 chrUn_NT_464122v1 166157 170344 GGERV28_I-int 125 + 166157 170344 0 3 130,1443,1994, 0,435,2193, +,+,+, 589180 LTR ERVK 586 chrUn_NT_464122v1 170582 172468 GGLTR7-int 764 + 170582 172468 0 4 213,267,329,1055, 0,235,502,831, +,+,+,+, 589181 LTR ERV1 586 chrUn_NT_464122v1 174148 175014 GGLTR10D-int 882 + 174148 175014 0 2 497,366, 0,500, +,+, 589183 LTR ERVK 586 chrUn_NT_464122v1 179515 180052 CR1-F0 555 + 179515 180052 0 2 394,138, 0,399, +,+, 589187 LINE CR1 586 chrUn_NT_464122v1 185728 186891 CR1-X2 505 + 185728 186891 0 2 984,179, 0,984, +,+, 589192 LINE CR1 586 chrUn_NT_464122v1 189529 190594 CR1-Y2_Aves 274 - 189529 190594 0 2 541,470, 0,595, -,-, 589196 LINE CR1 586 chrUn_NT_464122v1 208969 210014 CR1-Y2_Aves 252 - 208969 210014 0 2 533,469, 0,576, -,-, 589208 LINE CR1 586 chrUn_NT_464122v1 217057 217382 GGERV10_LTR 677 - 217057 217382 0 2 160,62, 0,263, -,-, 589210 LTR ERVL 586 chrUn_NT_464122v1 224119 225174 CR1-X2 389 + 224119 225174 0 2 876,179, 0,876, +,+, 589214 LINE CR1 586 chrUn_NT_464122v1 254680 259212 CR1-Y2_Aves 307 - 254680 259212 0 3 589,571,378, 0,3582,4154, -,-,-, 589234 LINE CR1 587 chrUn_NT_464122v1 302132 303187 CR1-X2 380 - 302132 303187 0 2 186,869, 0,186, -,-, 589258 LINE CR1 587 chrUn_NT_464122v1 317146 317660 CR1-X2 467 + 317146 317660 0 2 336,178, 0,336, +,+, 589266 LINE CR1 587 chrUn_NT_464122v1 320180 320891 CR1-Y2_Aves 227 - 320180 320891 0 2 388,302, 0,409, -,-, 589269 LINE CR1 587 chrUn_NT_464122v1 330730 331489 CR1-Y2_Aves 225 + 330730 331489 0 2 350,394, 0,365, +,+, 589274 LINE CR1 585 chrUn_NT_464123v1 45965 46799 CR1-Y2_Aves 273 + 45965 46799 0 3 190,375,242, 0,205,592, +,+,+, 589331 LINE CR1 585 chrUn_NT_464123v1 61272 63368 GGERVL-C-int 713 + 61272 63368 0 5 836,791,89,244,51, 0,836,1712,1801,2045, +,+,+,+,+, 589343 LTR ERVL 585 chrUn_NT_464123v1 100112 101187 CR1-Y2_Aves 276 - 100112 101187 0 2 563,474, 0,601, -,-, 589379 LINE CR1 586 chrUn_NT_464123v1 145428 145992 CR1-X2 565 + 145428 145992 0 2 385,165, 0,399, +,+, 589409 LINE CR1 586 chrUn_NT_464123v1 149749 151923 CR1-Y2_Aves 223 - 149749 151923 0 2 528,1267, 0,907, -,-, 589411 LINE CR1 586 chrUn_NT_464123v1 156578 156903 GGERV10_LTR 611 + 156578 156903 0 2 74,160, 0,165, +,+, 589414 LTR ERVL 586 chrUn_NT_464123v1 196667 197764 CR1-Y2_Aves 250 + 196667 197764 0 2 493,562, 0,535, +,+, 589444 LINE CR1 586 chrUn_NT_464123v1 209415 209672 GGERV10_LTR 536 + 209415 209672 0 2 65,117, 0,140, +,+, 589455 LTR ERVL 585 chrUn_NT_464124v1 1024 1274 (AACGGAAAT)n 803 + 1024 1274 0 2 93,103, 0,147, +,+, 589457 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 3509 3790 (AACGGAAAT)n 832 + 3509 3790 0 3 67,67,39, 0,121,242, +,+,+, 589465 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 4140 4280 (AACGGAAAT)n 857 + 4140 4280 0 2 39,47, 0,93, +,+, 589468 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 5999 6147 (ACGGAAATA)n 857 + 5999 6147 0 2 46,43, 0,105, +,+, 589472 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 8190 8357 (AACGGAAAT)n 830 + 8190 8357 0 2 56,57, 0,110, +,+, 589480 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 10614 10764 (AACGGAAAT)n 859 + 10614 10764 0 2 53,39, 0,111, +,+, 589490 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 11668 11827 (AACGGAAAT)n 850 + 11668 11827 0 2 62,39, 0,120, +,+, 589492 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 32806 32932 (AAAATAACG)n 542 + 32806 32932 0 2 39,34, 0,92, +,+, 589544 Satellite Satellite 585 chrUn_NT_464124v1 38049 38254 (AACGGAAAT)n 834 + 38049 38254 0 2 39,113, 0,92, +,+, 589558 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 39288 39602 (AACGGAAAT)n 877 + 39288 39602 0 3 114,45,45, 0,168,269, +,+,+, 589560 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 41023 41153 (AACGGAAAT)n 919 + 41023 41153 0 2 39,37, 0,93, +,+, 589563 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 43614 43750 (AACGGAAAT)n 906 + 43614 43750 0 2 39,47, 0,89, +,+, 589571 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 46599 46734 (AACGGAAAT)n 906 + 46599 46734 0 2 39,47, 0,88, +,+, 589580 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 51701 51901 (AACGGAAAT)n 801 + 51701 51901 0 2 39,99, 0,101, +,+, 589600 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 55749 55949 (AACGGAAAT)n 801 + 55749 55949 0 2 39,99, 0,101, +,+, 589613 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 96504 96654 (AACGGAAAT)n 859 + 96504 96654 0 2 39,57, 0,93, +,+, 589760 Simple_repeat Simple_repeat 585 chrUn_NT_464124v1 129299 129593 (AACGGAAAT)n 896 + 129299 129593 0 2 66,174, 0,120, +,+, 589895 Simple_repeat Simple_repeat 586 chrUn_NT_464124v1 131339 131498 (AACGGAAAT)n 934 + 131339 131498 0 2 57,48, 0,111, +,+, 589900 Simple_repeat Simple_repeat 586 chrUn_NT_464124v1 135420 135579 (AACGGAAAG)n 937 + 135420 135579 0 2 66,39, 0,120, +,+, 589912 Simple_repeat Simple_repeat 586 chrUn_NT_464124v1 136411 136582 (AACAACGGA)n 1000 + 136411 136582 0 2 51,69, 0,102, +,+, 589918 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 350 1284 (CCTCG)n 547 + 350 1284 0 4 179,101,225,178, 0,238,516,756, +,+,+,+, 589947 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 1529 1934 (CCTCG)n 617 + 1529 1934 0 2 180,185, 0,220, +,+, 589951 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 1969 3291 (CCTCG)n 540 + 1969 3291 0 4 374,136,48,364, 0,553,865,958, +,+,+,+, 589953 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 4234 5441 (CCTCG)n 603 + 4234 5441 0 5 367,180,104,100,50, 0,416,762,866,1157, +,+,+,+,+, 589958 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 19327 19601 (CCTTG)n 416 + 19327 19601 0 2 38,204, 0,70, +,+, 589963 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 21047 21780 (CCTTG)n 538 + 21047 21780 0 2 167,525, 0,208, +,+, 589966 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 22987 23411 (CCTTG)n 571 + 22987 23411 0 2 256,149, 0,275, +,+, 589974 Simple_repeat Simple_repeat 585 chrUn_NT_464125v1 32791 33865 ENS3-int 429 + 32791 33865 0 3 344,83,647, 0,344,427, +,+,+, 589982 LTR ERVL 585 chrUn_NT_464125v1 46416 47468 ENS3-int 662 + 46416 47468 0 2 180,242, 0,810, +,+, 589996 LTR ERVL 585 chrUn_NT_464125v1 61104 62358 GGERVL18-int 509 + 61104 62358 0 2 305,470, 0,784, +,+, 590014 LTR ERVL 585 chrUn_NT_464125v1 72630 73686 ENS3-int 595 + 72630 73686 0 2 180,246, 0,810, +,+, 590025 LTR ERVL 585 chrUn_NT_464125v1 75405 77030 GGERVL18-int 616 + 75405 77030 0 2 343,477, 0,1148, +,+, 590031 LTR ERVL 585 chrUn_NT_464125v1 87647 88699 ENS3-int 658 + 87647 88699 0 2 180,242, 0,810, +,+, 590041 LTR ERVL 585 chrUn_NT_464125v1 89667 91264 GGERVL18-int 521 + 89667 91264 0 2 317,477, 0,1120, +,+, 590045 LTR ERVL 585 chrUn_NT_464125v1 94830 97418 GGERVL18-int 527 - 94830 97418 0 3 235,1685,317, 0,586,2271, -,-,-, 590048 LTR ERVL 585 chrUn_NT_464125v1 101491 102911 GGERVL18-int 551 - 101491 102911 0 3 196,74,344, 0,196,1076, -,-,-, 590055 LTR ERVL 585 chrUn_NT_464125v1 104569 105560 ENS1-int 255 - 104569 105560 0 2 879,112, 0,879, -,-, 590060 LTR ERVL 585 chrUn_NT_464126v1 14534 14858 CR1-C4 450 + 14534 14858 0 2 271,53, 0,271, +,+, 590090 LINE CR1 585 chrUn_NT_464126v1 32330 34137 CR1-Y4 491 + 32330 34137 0 2 72,228, 0,1579, +,+, 590107 LINE CR1 585 chrUn_NT_464126v1 36516 37124 CR1-Y4 335 + 36516 37124 0 2 170,154, 0,454, +,+, 590112 LINE CR1 585 chrUn_NT_464126v1 46375 47013 CR1-H2 567 - 46375 47013 0 2 12,46, 0,592, -,-, 590123 LINE CR1 585 chrUn_NT_464126v1 47170 47272 CR1-C4 638 - 47170 47272 0 2 58,44, 0,58, -,-, 590127 LINE CR1 585 chrUn_NT_464126v1 63275 63417 CR1-B2 642 + 63275 63417 0 3 56,43,43, 0,56,99, +,+,+, 590146 LINE CR1 585 chrUn_NT_464126v1 63404 63590 CR1-B2 645 + 63404 63590 0 3 56,43,58, 0,56,128, +,+,+, 590147 LINE CR1 585 chrUn_NT_464126v1 63577 63677 CR1-B2 609 + 63577 63677 0 2 56,44, 0,56, +,+, 590148 LINE CR1 585 chrUn_NT_464126v1 72148 72268 CR1-C4 593 - 72148 72268 0 2 67,53, 0,67, -,-, 590156 LINE CR1 585 chrUn_NT_464126v1 82612 82797 CR1-F2 443 + 82612 82797 0 2 93,92, 0,93, +,+, 590171 LINE CR1 585 chrUn_NT_464126v1 84929 85413 CR1-C4 513 - 84929 85413 0 2 54,233, 0,251, -,-, 590173 LINE CR1 585 chrUn_NT_464126v1 88986 89350 CR1-C2 538 + 88986 89350 0 2 190,45, 0,319, +,+, 590178 LINE CR1 585 chrUn_NT_464126v1 89916 90023 CR1-C4 678 - 89916 90023 0 2 49,58, 0,49, -,-, 590179 LINE CR1 585 chrUn_NT_464126v1 92858 96252 CR1-F2 379 - 92858 96252 0 2 78,66, 0,3328, -,-, 590181 LINE CR1 585 chrUn_NT_464127v1 33522 33848 GGERV10_LTR 582 + 33522 33848 0 2 74,166, 0,160, +,+, 590205 LTR ERVL 585 chrUn_NT_464127v1 45350 46370 CR1-H 613 - 45350 46370 0 2 853,167, 0,853, -,-, 590213 LINE CR1 585 chrUn_NT_464127v1 68710 70071 CR1-X2 497 - 68710 70071 0 2 710,77, 0,1284, -,-, 590232 LINE CR1 585 chrUn_NT_464127v1 70617 71422 GGLTR5B 568 - 70617 71422 0 2 146,363, 0,442, -,-, 590236 LTR ERVL 585 chrUn_NT_464127v1 79633 80466 GGLTR5B 582 + 79633 80466 0 2 392,145, 0,688, +,+, 590247 LTR ERVL 585 chrUn_NT_464127v1 81013 82379 CR1-X2 488 + 81013 82379 0 2 77,719, 0,647, +,+, 590251 LINE CR1 585 chrUn_NT_464128v1 3556 4179 CR1-H 654 + 3556 4179 0 2 478,139, 0,484, +,+, 590268 LINE CR1 585 chrUn_NT_464128v1 10835 13398 CR1-F0 892 + 10835 13398 0 2 2129,434, 0,2129, +,+, 590273 LINE CR1 585 chrUn_NT_464128v1 16703 17333 CR1-C 704 - 16703 17333 0 2 65,565, 0,65, -,-, 590278 LINE CR1 585 chrUn_NT_464128v1 20302 21573 CR1-H 613 + 20302 21573 0 2 1158,113, 0,1158, +,+, 590281 LINE CR1 585 chrUn_NT_464128v1 33284 34492 CR1-C3 490 + 33284 34492 0 2 96,155, 0,1053, +,+, 590292 LINE CR1 585 chrUn_NT_464128v1 37461 38669 CR1-C3 500 + 37461 38669 0 2 96,155, 0,1053, +,+, 590296 LINE CR1 585 chrUn_NT_464128v1 41551 42759 CR1-C3 500 + 41551 42759 0 2 96,155, 0,1053, +,+, 590300 LINE CR1 585 chrUn_NT_464128v1 45642 46850 CR1-C3 490 + 45642 46850 0 2 96,155, 0,1053, +,+, 590304 LINE CR1 585 chrUn_NT_464128v1 65963 66055 (CCCGAA)n 366 + 65963 66055 0 2 6,23, 0,69, +,+, 590318 Simple_repeat Simple_repeat 585 chrUn_NT_464129v1 2851 3861 GGERVL-C-int 799 - 2851 3861 0 2 145,865, 0,145, -,-, 590341 LTR ERVL 585 chrUn_NT_464129v1 12357 15193 CR1-D 387 - 12357 15193 0 2 1878,691, 0,2145, -,-, 590348 LINE CR1 585 chrUn_NT_464129v1 15192 16661 GGERVL-B-int 719 - 15192 16661 0 3 363,461,645, 0,363,824, -,-,-, 590350 LTR ERVL 585 chrUn_NT_464129v1 16676 18341 GGERVL-A-int 479 + 16676 18341 0 2 379,732, 0,933, +,+, 590351 LTR ERVL 585 chrUn_NT_464129v1 18341 20329 GGERVL-C-int 781 - 18341 20329 0 3 491,477,1019, 0,492,969, -,-,-, 590353 LTR ERVL 585 chrUn_NT_464129v1 21550 26378 GGERVL-A-int 557 - 21550 26378 0 5 65,251,3140,264,67, 0,65,1317,4497,4761, -,-,-,-,-, 590356 LTR ERVL 585 chrUn_NT_464129v1 26382 33273 GGERVL18-int 618 - 26382 33273 0 5 321,2726,1552,1019,73, 0,325,3529,5583,6818, -,-,-,-,-, 590359 LTR ERVL 585 chrUn_NT_464129v1 39625 45072 GGLTR5B 481 + 39625 45072 0 2 155,128, 0,5319, +,+, 590370 LTR ERVL 585 chrUn_NT_464129v1 40065 40601 GGERVL-C-int 828 - 40065 40601 0 2 485,51, 0,485, -,-, 590373 LTR ERVL 585 chrUn_NT_464129v1 46023 50199 GGERVL-A-int 145 + 46023 50199 0 2 132,565, 0,3611, +,+, 590378 LTR ERVL 585 chrUn_NT_464129v1 50820 52548 GGERVL18-int 517 - 50820 52548 0 4 303,455,326,165, 0,304,1237,1563, -,-,-,-, 590383 LTR ERVL 585 chrUn_NT_464129v1 53206 65691 GGERVL-A-int 764 - 53206 65691 0 9 507,972,530,3015,473,45,4732,683,463, 0,507,1479,2009,5026,5499,5586,11337,12022, -,-,-,-,-,-,-,-,-, 590386 LTR ERVL 585 chrUn_NT_464129v1 66159 71274 GGERVL-A-int 555 - 66159 71274 0 4 458,266,186,737, 0,465,1024,4378, -,-,-,-, 590389 LTR ERVL 585 chrUn_NT_464129v1 67377 70156 GGERVL18-int 675 - 67377 70156 0 2 332,2447, 0,332, -,-, 590391 LTR ERVL 585 chrUn_NT_464129v1 72661 75080 GGERVL-A-int 524 + 72661 75080 0 3 388,1041,986, 0,389,1433, +,+,+, 590394 LTR ERVL 585 chrUn_NT_464129v1 81856 85023 CR1-F2 493 - 81856 85023 0 3 1170,87,565, 0,2513,2602, -,-,-, 590405 LINE CR1 585 chrUn_NT_464129v1 89354 90232 GGLTR3C2 628 - 89354 90232 0 3 221,325,140, 0,411,738, -,-,-, 590414 LTR ERVL 585 chrUn_NT_464130v1 1485 2076 CR1-C 596 - 1485 2076 0 2 405,186, 0,405, -,-, 590419 LINE CR1 585 chrUn_NT_464130v1 3002 4487 CR1-C 567 - 3002 4487 0 3 40,471,294, 0,258,1191, -,-,-, 590424 LINE CR1 585 chrUn_NT_464130v1 8474 8543 (CCCCCCA)n 520 + 8474 8543 0 2 31,6, 0,63, +,+, 590429 Simple_repeat Simple_repeat 585 chrUn_NT_464130v1 24094 25569 CR1-C4 405 + 24094 25569 0 3 386,705,150, 0,604,1325, +,+,+, 590439 LINE CR1 585 chrUn_NT_464130v1 59841 64732 Z-REP 881 - 59841 64732 0 2 1623,3120, 0,1771, -,-, 590451 Satellite macro 585 chrUn_NT_464131v1 2039 6608 GGERVL18-int 805 + 2039 6608 0 3 121,2976,1167, 0,121,3402, +,+,+, 590471 LTR ERVL 585 chrUn_NT_464131v1 9192 11150 CR1-G 504 - 9192 11150 0 2 407,1292, 0,666, -,-, 590474 LINE CR1 585 chrUn_NT_464131v1 13997 14320 GGERV10_LTR 575 - 13997 14320 0 2 159,84, 0,239, -,-, 590478 LTR ERVL 585 chrUn_NT_464131v1 16332 16870 GGERV10_LTR 949 + 16332 16870 0 2 322,216, 0,322, +,+, 590480 LTR ERVL 585 chrUn_NT_464131v1 17330 24262 GGLTR11-int 776 + 17330 24262 0 5 405,3304,140,2043,513, 0,406,4016,4376,6419, +,+,+,+,+, 590481 LTR ERV1 585 chrUn_NT_464131v1 29264 54667 GGERVL18-int 568 + 29264 54667 0 5 558,1220,811,154,1476, 0,558,16095,17508,23927, +,+,+,+,+, 590485 LTR ERVL 585 chrUn_NT_464131v1 31076 39204 GGLTR11-int 809 + 31076 39204 0 4 532,706,708,353, 0,533,1273,7775, +,+,+,+, 590486 LTR ERV1 585 chrUn_NT_464131v1 33054 38851 GGERV10_LTR 927 + 33054 38851 0 3 223,5353,220, 0,224,5577, +,+,+, 590488 LTR ERVL 585 chrUn_NT_464131v1 39689 42539 GGLTR7-int 654 + 39689 42539 0 3 476,115,1139, 0,935,1711, +,+,+, 590490 LTR ERV1 585 chrUn_NT_464131v1 42538 45356 CR1-F 856 + 42538 45356 0 2 1645,1168, 0,1650, +,+, 590493 LINE CR1 585 chrUn_NT_464131v1 46926 53007 GGLTR7-int 470 - 46926 53007 0 6 337,816,1594,2187,212,329, 0,821,1759,3353,5540,5752, -,-,-,-,-,-, 590495 LTR ERV1 585 chrUn_NT_464131v1 54667 68350 GGERVL-B-int 664 - 54667 68350 0 4 543,1560,842,2457, 0,545,3070,11226, -,-,-,-, 590497 LTR ERVL 585 chrUn_NT_464131v1 56775 57736 CR1-H 836 + 56775 57736 0 2 258,60, 0,901, +,+, 590498 LINE CR1 585 chrUn_NT_464131v1 58579 60538 GGERVL-C-int 874 - 58579 60538 0 2 527,1432, 0,527, -,-, 590500 LTR ERVL 585 chrUn_NT_464131v1 61015 65891 GGLTR3A 799 - 61015 65891 0 2 4349,527, 0,4349, -,-, 590502 LTR ERVL 585 chrUn_NT_464131v1 70676 71253 GGLTR3G1 256 - 70676 71253 0 2 442,110, 0,467, -,-, 590505 LTR ERVL 585 chrUn_NT_464131v1 71685 72596 GGLTR6 623 - 71685 72596 0 2 350,98, 0,813, -,-, 590507 LTR ERVL 585 chrUn_NT_464131v1 73814 84193 ENS3-int 566 + 73814 84193 0 6 736,384,361,393,114,298, 0,741,3023,4333,9967,10081, +,+,+,+,+,+, 590509 LTR ERVL 585 chrUn_NT_464131v1 78544 83679 GGERVK10-int 843 + 78544 83679 0 2 364,4771, 0,364, +,+, 590512 LTR ERVK 585 chrUn_NT_464132v1 18115 20198 GGLTR7-int 354 + 18115 20198 0 2 211,236, 0,1847, +,+, 590521 LTR ERV1 585 chrUn_NT_464132v1 27336 28696 CR1-F2 336 + 27336 28696 0 2 1230,130, 0,1230, +,+, 590529 LINE CR1 585 chrUn_NT_464132v1 35964 37022 CR1-F2 402 + 35964 37022 0 2 217,305, 0,753, +,+, 590539 LINE CR1 585 chrUn_NT_464132v1 48194 49192 GGERVL-B-int 714 - 48194 49192 0 3 513,172,135, 0,513,863, -,-,-, 590551 LTR ERVL 585 chrUn_NT_464132v1 50521 57910 GGLTR7A 854 - 50521 57910 0 3 504,6270,609, 0,510,6780, -,-,-, 590554 LTR ERV1 585 chrUn_NT_464132v1 57949 59237 (CCTTG)n 626 + 57949 59237 0 4 244,161,258,195, 0,674,835,1093, +,+,+,+, 590555 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 59264 59969 (CCTTG)n 605 + 59264 59969 0 4 99,16,76,231, 0,202,398,474, +,+,+,+, 590558 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 60036 60940 (CCTTG)n 639 + 60036 60940 0 4 178,197,244,93, 0,178,390,811, +,+,+,+, 590562 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 60860 61164 (GCCTG)n 498 + 60860 61164 0 2 107,20, 0,284, +,+, 590564 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 61872 62247 (CCTTG)n 681 + 61872 62247 0 2 178,197, 0,178, +,+, 590570 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 63552 64596 (CCTTG)n 649 + 63552 64596 0 3 177,357,425, 0,178,619, +,+,+, 590579 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 67590 68019 (CCTTG)n 693 + 67590 68019 0 2 208,221, 0,208, +,+, 590589 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 68090 69570 (CCTTG)n 686 + 68090 69570 0 4 244,184,208,131, 0,457,671,1349, +,+,+,+, 590591 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 69484 70326 (GCCTG)n 498 + 69484 70326 0 3 127,19,26, 0,619,816, +,+,+, 590596 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 69611 70103 (CCTTG)n 658 + 69611 70103 0 2 193,125, 0,367, +,+, 590597 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 70639 71091 (CCTTG)n 665 + 70639 71091 0 2 203,246, 0,206, +,+, 590600 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 71113 71927 (CCTTG)n 669 + 71113 71927 0 2 446,368, 0,446, +,+, 590602 Simple_repeat Simple_repeat 585 chrUn_NT_464132v1 71918 75287 GGLTR10D 945 - 71918 75287 0 3 343,2680,346, 0,343,3023, -,-,-, 590603 LTR ERVK 585 chrUn_NT_464133v1 6403 6931 (ACCCATAGGG)n 581 + 6403 6931 0 4 209,118,70,131, 0,209,327,397, +,+,+,+, 590615 Satellite Satellite 585 chrUn_NT_464133v1 6961 7481 (ACCCATAGGG)n 512 + 6961 7481 0 2 237,283, 0,237, +,+, 590617 Satellite Satellite 585 chrUn_NT_464133v1 7592 7913 (ACCCCATAGGG)n 428 - 7592 7913 0 2 84,73, 0,248, -,-, 590620 Satellite Satellite 585 chrUn_NT_464133v1 7945 8285 (ACCCCATAGGG)n 555 + 7945 8285 0 2 133,165, 0,175, +,+, 590623 Satellite Satellite 585 chrUn_NT_464133v1 14523 14760 (ACCCCATAGGG)n 377 - 14523 14760 0 2 106,119, 0,118, -,-, 590635 Satellite Satellite 585 chrUn_NT_464133v1 22962 23204 (ACCCATAGAG)n 520 - 22962 23204 0 2 117,112, 0,130, -,-, 590651 Satellite Satellite 585 chrUn_NT_464133v1 25975 26085 (CTCTATGGGG)n 308 + 25975 26085 0 2 17,37, 0,73, +,+, 590658 Satellite Satellite 585 chrUn_NT_464133v1 28680 28939 (ACCCCATAGGG)n 357 + 28680 28939 0 2 130,99, 0,160, +,+, 590662 Satellite Satellite 585 chrUn_NT_464133v1 42789 43099 (ACCCCATAGGG)n 404 - 42789 43099 0 2 128,165, 0,145, -,-, 590689 Satellite Satellite 585 chrUn_NT_464133v1 67142 67450 (ACCCCATAGGG)n 397 - 67142 67450 0 2 128,163, 0,145, -,-, 590742 Satellite Satellite 585 chrUn_NT_464133v1 74653 75220 (ACCCCATAGGG)n 319 - 74653 75220 0 3 139,231,161, 0,166,406, -,-,-, 590754 Satellite Satellite 585 chrUn_NT_464133v1 75284 76051 (ACCCCATAGGG)n 310 - 75284 76051 0 5 139,122,196,91,125, 0,166,306,520,642, -,-,-,-,-, 590755 Satellite Satellite 585 chrUn_NT_464134v1 15030 15738 (ACCCATAGGG)n 365 - 15030 15738 0 4 119,220,40,99, 0,119,453,609, -,-,-,-, 590774 Satellite Satellite 585 chrUn_NT_464134v1 26436 26848 (CTCTATGGGG)n 567 + 26436 26848 0 3 121,116,122, 0,140,290, +,+,+, 590791 Satellite Satellite 585 chrUn_NT_464134v1 29676 29988 (AC)n 775 + 29676 29988 0 4 35,31,27,36, 0,94,187,276, +,+,+,+, 590794 Simple_repeat Simple_repeat 585 chrUn_NT_464134v1 30055 30114 (TGACAC)n 344 + 30055 30114 0 2 10,14, 0,45, +,+, 590795 Simple_repeat Simple_repeat 585 chrUn_NT_464134v1 36749 37025 (CTCTATGGGG)n 656 + 36749 37025 0 2 108,28, 0,248, +,+, 590805 Satellite Satellite 585 chrUn_NT_464134v1 39394 39553 G-rich 480 + 39394 39553 0 2 60,64, 0,95, +,+, 590814 Low_complexity Low_complexity 585 chrUn_NT_464134v1 67081 67380 (CCCAT)n 240 + 67081 67380 0 2 39,178, 0,121, +,+, 590834 Simple_repeat Simple_repeat 585 chrUn_NT_464135v1 9202 9357 CR1-E 587 - 9202 9357 0 3 59,48,48, 0,59,107, -,-,-, 590884 LINE CR1 585 chrUn_NT_464135v1 14707 14802 CR1-C4 619 + 14707 14802 0 2 52,43, 0,52, +,+, 590895 LINE CR1 585 chrUn_NT_464135v1 19176 19276 CR1-E 584 - 19176 19276 0 2 48,52, 0,48, -,-, 590903 LINE CR1 585 chrUn_NT_464135v1 19806 19896 CR1-C4 724 - 19806 19896 0 2 45,42, 0,48, -,-, 590907 LINE CR1 585 chrUn_NT_464135v1 22119 22218 CR1-E 651 + 22119 22218 0 2 55,44, 0,55, +,+, 590915 LINE CR1 585 chrUn_NT_464135v1 25574 25703 CR1-E 699 + 25574 25703 0 3 46,41,42, 0,46,87, +,+,+, 590925 LINE CR1 585 chrUn_NT_464135v1 31561 32609 CR1-Y4 293 + 31561 32609 0 2 268,638, 0,410, +,+, 590940 LINE CR1 585 chrUn_NT_464135v1 35219 35328 CR1-C2 756 - 35219 35328 0 2 62,47, 0,62, -,-, 590943 LINE CR1 585 chrUn_NT_464135v1 36886 37423 CR1-Y3 396 - 36886 37423 0 2 246,291, 0,246, -,-, 590954 LINE CR1 585 chrUn_NT_464135v1 48865 50425 CR1-F2 396 - 48865 50425 0 5 62,94,83,139,179, 0,72,166,404,1381, -,-,-,-,-, 590971 LINE CR1 585 chrUn_NT_464135v1 49103 49269 CR1-F2 434 - 49103 49269 0 2 94,72, 0,94, -,-, 590972 LINE CR1 585 chrUn_NT_464135v1 53105 53788 (CAGTG)n 233 + 53105 53788 0 3 190,273,198, 0,190,485, +,+,+, 590980 Simple_repeat Simple_repeat 585 chrUn_NT_464135v1 53845 54383 (CAATG)n 280 + 53845 54383 0 2 214,317, 0,221, +,+, 590981 Simple_repeat Simple_repeat 585 chrUn_NT_464135v1 54917 55353 (CAGTG)n 196 + 54917 55353 0 2 150,119, 0,317, +,+, 590984 Simple_repeat Simple_repeat 585 chrUn_NT_464135v1 56361 58803 CR1-F2 474 - 56361 58803 0 4 98,22,13,66, 0,2257,2334,2376, -,-,-,-, 590987 LINE CR1 585 chrUn_NT_464135v1 56913 58132 CR1-H2 312 - 56913 58132 0 2 26,60, 0,1159, -,-, 590992 LINE CR1 585 chrUn_NT_464135v1 58933 59085 CR1-Y2 620 - 58933 59085 0 2 67,64, 0,88, -,-, 591001 LINE CR1 585 chrUn_NT_464136v1 37050 37844 (CGAGG)n 512 + 37050 37844 0 4 40,42,109,217, 0,218,294,577, +,+,+,+, 591043 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 37959 38529 (CGAGG)n 576 + 37959 38529 0 2 180,355, 0,215, +,+, 591047 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 38663 40810 (CGAGG)n 601 + 38663 40810 0 4 546,1138,179,216, 0,566,1744,1931, +,+,+,+, 591050 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 40930 41500 (CGAGG)n 585 + 40930 41500 0 2 360,180, 0,390, +,+, 591052 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 41672 43138 (CGAGG)n 536 + 41672 43138 0 5 509,180,177,297,179, 0,529,737,939,1287, +,+,+,+,+, 591054 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 43203 44487 (CGAGG)n 582 + 43203 44487 0 3 435,20,596, 0,615,688, +,+,+, 591056 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 45172 47932 (CGAGG)n 524 + 45172 47932 0 7 301,1100,135,22,99,45,445, 0,301,1461,1776,1976,2255,2315, +,+,+,+,+,+,+, 591062 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 48069 49080 (CGAGG)n 546 + 48069 49080 0 3 305,121,275, 0,586,736, +,+,+, 591067 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 49565 50584 (CGAGG)n 597 + 49565 50584 0 3 179,437,226, 0,356,793, +,+,+, 591073 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 50656 51789 (CGAGG)n 555 + 50656 51789 0 4 221,129,128,174, 0,488,650,959, +,+,+,+, 591076 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 51816 53039 (CGAGG)n 607 + 51816 53039 0 3 592,180,391, 0,652,832, +,+,+, 591080 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 53937 55318 (CGAGG)n 554 + 53937 55318 0 5 277,186,215,261,185, 0,317,528,924,1196, +,+,+,+,+, 591084 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 56026 56860 (CGAGG)n 606 + 56026 56860 0 2 410,209, 0,625, +,+, 591089 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 56910 57821 (CGAGG)n 570 + 56910 57821 0 3 180,214,488, 0,180,423, +,+,+, 591092 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 58446 59756 (CGAGG)n 560 + 58446 59756 0 4 415,180,250,256, 0,445,625,1054, +,+,+,+, 591096 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 59811 60304 (CGAGG)n 554 + 59811 60304 0 2 139,174, 0,319, +,+, 591099 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 60364 60926 (CGAGG)n 566 + 60364 60926 0 3 120,12,232, 0,300,330, +,+,+, 591102 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 61036 62792 (CGAGG)n 528 + 61036 62792 0 4 595,456,255,352, 0,634,1104,1404, +,+,+,+, 591106 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 62851 63490 (CGAGG)n 534 + 62851 63490 0 2 359,100, 0,539, +,+, 591108 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 63582 64286 (CGAGG)n 618 + 63582 64286 0 2 252,270, 0,434, +,+, 591111 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 64361 65372 (CGAGG)n 566 + 64361 65372 0 3 233,55,361, 0,413,650, +,+,+, 591114 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 65891 66466 (CGAGG)n 607 + 65891 66466 0 2 358,217, 0,358, +,+, 591119 Simple_repeat Simple_repeat 585 chrUn_NT_464136v1 69700 70327 CR1-H 686 - 69700 70327 0 2 139,469, 0,158, -,-, 591125 LINE CR1 585 chrUn_NT_464136v1 72426 72882 CR1-H 672 - 72426 72882 0 2 162,294, 0,162, -,-, 591129 LINE CR1 585 chrUn_NT_464137v1 48184 48414 (CCCCATTGGG)n 409 - 48184 48414 0 2 99,118, 0,112, -,-, 591183 Satellite Satellite 585 chrUn_NT_464137v1 65899 66174 (ACCCATAGGG)n 502 - 65899 66174 0 2 125,150, 0,125, -,-, 591197 Satellite Satellite 585 chrUn_NT_464137v1 66156 66735 (ACCCATAGAG)n 518 - 66156 66735 0 2 251,201, 0,378, -,-, 591198 Satellite Satellite 585 chrUn_NT_464138v1 5512 10458 CR1-F2 522 - 5512 10458 0 2 740,2043, 0,2903, -,-, 591217 LINE CR1 585 chrUn_NT_464138v1 10464 13149 CR1-C4 407 - 10464 13149 0 3 390,143,696, 0,1326,1989, -,-,-, 591220 LINE CR1 585 chrUn_NT_464138v1 26523 26617 (A)n 820 + 26523 26617 0 2 22,25, 0,69, +,+, 591245 Simple_repeat Simple_repeat 585 chrUn_NT_464138v1 34121 34685 CR1-Y4 430 - 34121 34685 0 2 14,513, 0,51, -,-, 591262 LINE CR1 585 chrUn_NT_464138v1 50311 51347 CR1-Y2_Aves 285 + 50311 51347 0 2 87,746, 0,290, +,+, 591283 LINE CR1 585 chrUn_NT_464138v1 51345 52556 CR1-Y4 393 + 51345 52556 0 2 653,558, 0,653, +,+, 591285 LINE CR1 585 chrUn_NT_464138v1 57462 57888 GGLTR5B 315 + 57462 57888 0 2 208,215, 0,211, +,+, 591293 LTR ERVL 585 chrUn_NT_464139v1 57450 57814 (CATTG)n 376 + 57450 57814 0 2 177,154, 0,210, +,+, 591397 Simple_repeat Simple_repeat 585 chrUn_NT_464139v1 70307 70439 (C)n 574 + 70307 70439 0 2 41,35, 0,97, +,+, 591415 Simple_repeat Simple_repeat 585 chrUn_NT_464140v1 1957 2372 Sat-CR1_GG 166 - 1957 2372 0 2 175,75, 0,340, -,-, 591437 Satellite Satellite 585 chrUn_NT_464140v1 3388 3961 Sat-CR1_GG 188 - 3388 3961 0 2 178,230, 0,343, -,-, 591441 Satellite Satellite 585 chrUn_NT_464140v1 4818 5391 Sat-CR1_GG 188 - 4818 5391 0 2 178,230, 0,343, -,-, 591447 Satellite Satellite 585 chrUn_NT_464140v1 6249 6822 Sat-CR1_GG 188 - 6249 6822 0 2 178,153, 0,420, -,-, 591452 Satellite Satellite 585 chrUn_NT_464140v1 7679 8252 Sat-CR1_GG 188 - 7679 8252 0 2 178,153, 0,420, -,-, 591458 Satellite Satellite 585 chrUn_NT_464140v1 9109 9682 Sat-CR1_GG 188 - 9109 9682 0 2 178,153, 0,420, -,-, 591463 Satellite Satellite 585 chrUn_NT_464140v1 48895 49467 Sat-CR1_GG 194 - 48895 49467 0 2 178,153, 0,419, -,-, 591574 Satellite Satellite 585 chrUn_NT_464140v1 50323 50896 Sat-CR1_GG 188 - 50323 50896 0 2 178,153, 0,420, -,-, 591578 Satellite Satellite 585 chrUn_NT_464140v1 51753 52321 Sat-CR1_GG 184 - 51753 52321 0 2 176,226, 0,342, -,-, 591583 Satellite Satellite 585 chrUn_NT_464140v1 56088 56470 Sat-CR1_GG 140 - 56088 56470 0 2 134,78, 0,304, -,-, 591597 Satellite Satellite 585 chrUn_NT_464140v1 63336 63754 Sat-CR1_GG 190 - 63336 63754 0 2 40,185, 0,233, -,-, 591618 Satellite Satellite 585 chrUn_NT_464140v1 67600 68020 Sat-CR1_GG 196 - 67600 68020 0 2 24,153, 0,267, -,-, 591631 Satellite Satellite 585 chrUn_NT_464141v1 36830 37149 (GCCCCACAGCT)n 402 - 36830 37149 0 2 137,123, 0,196, -,-, 591687 Satellite Satellite 585 chrUn_NT_464142v1 20690 21283 CR1-G 414 + 20690 21283 0 2 304,289, 0,304, +,+, 591741 LINE CR1 585 chrUn_NT_464142v1 21311 27091 CR1-Y4 251 - 21311 27091 0 2 286,727, 0,5053, -,-, 591742 LINE CR1 585 chrUn_NT_464142v1 21623 24382 GGERVL-A-int 766 - 21623 24382 0 2 503,2256, 0,503, -,-, 591743 LTR ERVL 585 chrUn_NT_464142v1 24372 26294 GGERVL-B-int 719 - 24372 26294 0 4 427,946,59,413, 0,472,1420,1509, -,-,-,-, 591744 LTR ERVL 585 chrUn_NT_464142v1 28220 31633 GGLTR10C2 747 - 28220 31633 0 3 364,2746,301, 0,364,3112, -,-,-, 591749 LTR ERVK 585 chrUn_NT_464142v1 32960 34915 CR1-C 579 + 32960 34915 0 2 420,823, 0,1132, +,+, 591754 LINE CR1 585 chrUn_NT_464142v1 35937 51271 GGLTR7-int 782 - 35937 51271 0 8 609,3867,350,274,212,986,1549,577, 0,610,5394,5744,6039,11400,13208,14757, -,-,-,-,-,-,-,-, 591757 LTR ERV1 585 chrUn_NT_464142v1 42426 46179 GGERV28_I-int 145 - 42426 46179 0 3 1994,376,786, 0,2309,2967, -,-,-, 591758 LTR ERVK 585 chrUn_NT_464143v1 11505 11707 CR1-C4 420 + 11505 11707 0 2 71,55, 0,147, +,+, 591791 LINE CR1 585 chrUn_NT_464143v1 36074 36610 CR1-B2 637 + 36074 36610 0 2 89,447, 0,89, +,+, 591808 LINE CR1 585 chrUn_NT_464143v1 45183 45336 CR1-H 586 - 45183 45336 0 2 61,46, 0,107, -,-, 591821 LINE CR1 585 chrUn_NT_464144v1 5444 5530 (GCG)n 342 + 5444 5530 0 2 17,35, 0,51, +,+, 591868 Simple_repeat Simple_repeat 585 chrUn_NT_464144v1 46986 47041 (CCCCGCC)n 378 + 46986 47041 0 2 21,9, 0,46, +,+, 591913 Simple_repeat Simple_repeat 585 chrUn_NT_464147v1 606 7923 GGLTR7A 802 - 606 7923 0 4 634,2305,3928,449, 0,634,2939,6868, -,-,-,-, 592010 LTR ERV1 585 chrUn_NT_464147v1 10197 13496 GGERVL-A-int 227 - 10197 13496 0 3 1013,251,246, 0,2323,3053, -,-,-, 592016 LTR ERVL 585 chrUn_NT_464147v1 14774 16468 CR1-E 796 + 14774 16468 0 2 638,758, 0,936, +,+, 592024 LINE CR1 585 chrUn_NT_464147v1 19640 41920 GGLTR11-int 521 - 19640 41920 0 5 94,527,958,98,141, 0,140,1817,18070,22139, -,-,-,-,-, 592030 LTR ERV1 585 chrUn_NT_464147v1 22415 32127 GGERVL18-int 739 - 22415 32127 0 5 131,750,549,66,2803, 0,131,1408,5893,6909, -,-,-,-,-, 592034 LTR ERVL 585 chrUn_NT_464147v1 24370 28006 CR1-C 891 - 24370 28006 0 2 270,3363, 0,273, -,-, 592036 LINE CR1 585 chrUn_NT_464147v1 33079 35672 GGLTR7A 858 - 33079 35672 0 2 1986,607, 0,1986, -,-, 592040 LTR ERV1 585 chrUn_NT_464147v1 35672 37475 GGERVL-C-int 812 - 35672 37475 0 2 1310,493, 0,1310, -,-, 592041 LTR ERVL 585 chrUn_NT_464147v1 37808 39010 GGLTR3C2 707 - 37808 39010 0 2 299,66, 0,1136, -,-, 592042 LTR ERVL 585 chrUn_NT_464147v1 44491 52104 GGLTR3E1 619 + 44491 52104 0 5 332,124,74,1200,833, 0,358,510,586,6780, +,+,+,+,+, 592047 LTR ERVL 585 chrUn_NT_464147v1 46264 49563 GGERV10_LTR 765 + 46264 49563 0 3 75,150,2982, 0,167,317, +,+,+, 592050 LTR ERVL 585 chrUn_NT_464147v1 49565 51270 GGLTR3A 430 - 49565 51270 0 2 1211,494, 0,1211, -,-, 592051 LTR ERVL 585 chrUn_NT_464147v1 53149 58488 GGLTR3B1 766 + 53149 58488 0 2 392,4947, 0,392, +,+, 592054 LTR ERVL 585 chrUn_NT_464147v1 58488 63536 GGLTR7-int 806 + 58488 63536 0 3 595,260,3202, 0,595,1846, +,+,+, 592055 LTR ERV1 585 chrUn_NT_464147v1 59343 60334 GGLTR10D 925 + 59343 60334 0 3 44,601,346, 0,44,645, +,+,+, 592056 LTR ERVK 585 chrUn_NT_464148v1 24238 24505 (ACCCCATAGGG)n 407 - 24238 24505 0 2 125,113, 0,154, -,-, 592085 Satellite Satellite 585 chrUn_NT_464148v1 50424 51248 (CCCTC)n 170 + 50424 51248 0 2 12,35, 0,789, +,+, 592120 Simple_repeat Simple_repeat 585 chrUn_NT_464149v1 1500 7029 GGERV28_I-int 685 - 1500 7029 0 3 105,4248,476, 0,805,5053, -,-,-, 592137 LTR ERVK 585 chrUn_NT_464149v1 7029 9656 GGERVL-B-int 824 - 7029 9656 0 2 2150,475, 0,2152, -,-, 592138 LTR ERVL 585 chrUn_NT_464149v1 12641 15415 GGLTR3B4 681 - 12641 15415 0 4 126,457,892,140, 0,666,1127,2634, -,-,-,-, 592139 LTR ERVL 585 chrUn_NT_464149v1 18702 23148 GGLTR7-int 557 - 18702 23148 0 6 751,274,2182,90,291,126, 0,784,1315,3499,4019,4320, -,-,-,-,-,-, 592146 LTR ERV1 585 chrUn_NT_464149v1 24407 27076 GGERVL-A-int 296 - 24407 27076 0 3 348,1813,398, 0,360,2271, -,-,-, 592149 LTR ERVL 585 chrUn_NT_464149v1 29558 30562 GGLTR7-int 255 - 29558 30562 0 3 196,232,109, 0,433,895, -,-,-, 592152 LTR ERV1 585 chrUn_NT_464149v1 33339 38334 GGERVL-A-int 447 - 33339 38334 0 2 918,253, 0,4742, -,-, 592157 LTR ERVL 585 chrUn_NT_464149v1 34562 38086 CR1-G 663 + 34562 38086 0 2 1336,2040, 0,1484, +,+, 592159 LINE CR1 585 chrUn_NT_464149v1 38821 45740 GGLTR7-int 749 - 38821 45740 0 3 4178,720,537, 0,4203,6382, -,-,-, 592163 LTR ERV1 585 chrUn_NT_464149v1 46248 51235 GGERV20_I-int 709 - 46248 51235 0 5 1830,2350,106,160,65, 0,2195,4546,4653,4922, -,-,-,-,-, 592166 LTR ERVL 585 chrUn_NT_464149v1 51232 53945 GGERVL-C-int 538 - 51232 53945 0 3 1006,1130,557, 0,1007,2156, -,-,-, 592168 LTR ERVL 585 chrUn_NT_464149v1 60346 62161 GGERV20_I-int 558 - 60346 62161 0 6 268,44,807,270,161,72, 0,272,400,1212,1483,1743, -,-,-,-,-,-, 592171 LTR ERVL 585 chrUn_NT_464150v1 1608 2450 GGLTR7A 884 + 1608 2450 0 2 609,233, 0,609, +,+, 592175 LTR ERV1 585 chrUn_NT_464150v1 2751 3786 CR1-H 677 - 2751 3786 0 2 895,116, 0,919, -,-, 592176 LINE CR1 585 chrUn_NT_464150v1 5608 13611 ENS3-int 978 - 5608 13611 0 4 915,415,5758,914, 0,915,1330,7089, -,-,-,-, 592179 LTR ERVL 585 chrUn_NT_464150v1 16932 17320 (GAGTG)n 422 + 16932 17320 0 2 177,179, 0,209, +,+, 592182 Simple_repeat Simple_repeat 585 chrUn_NT_464150v1 17927 20764 GGERVL-A-int 682 - 17927 20764 0 3 2237,73,518, 0,2246,2319, -,-,-, 592188 LTR ERVL 585 chrUn_NT_464150v1 21213 21703 GGLTR3F2 808 - 21213 21703 0 2 229,231, 0,259, -,-, 592189 LTR ERVL 585 chrUn_NT_464150v1 22329 29551 GGLTR7A 867 - 22329 29551 0 3 608,6340,274, 0,608,6948, -,-,-, 592191 LTR ERV1 585 chrUn_NT_464150v1 29692 30030 CR1-F 570 + 29692 30030 0 2 183,114, 0,224, +,+, 592193 LINE CR1 585 chrUn_NT_464150v1 30057 30920 CR1-F 552 - 30057 30920 0 4 184,185,185,185, 0,226,451,678, -,-,-,-, 592194 LINE CR1 585 chrUn_NT_464150v1 31206 31738 CR1-F 434 - 31206 31738 0 2 173,176, 0,356, -,-, 592196 LINE CR1 585 chrUn_NT_464150v1 31801 35173 GGLTR7A 832 - 31801 35173 0 2 571,2801, 0,571, -,-, 592197 LTR ERV1 585 chrUn_NT_464150v1 35161 41225 GGLTR7A 714 - 35161 41225 0 2 38,202, 0,5862, -,-, 592198 LTR ERV1 585 chrUn_NT_464150v1 35199 41025 GGERV10_LTR 985 - 35199 41025 0 3 220,5383,222, 0,220,5604, -,-,-, 592199 LTR ERVL 585 chrUn_NT_464150v1 41924 43267 GGERVL-A-int 639 + 41924 43267 0 3 499,174,60, 0,500,1283, +,+,+, 592201 LTR ERVL 585 chrUn_NT_464150v1 44956 45701 GGERVL-C-int 783 - 44956 45701 0 2 522,223, 0,522, -,-, 592203 LTR ERVL 585 chrUn_NT_464150v1 45952 48891 GGLTR3F2 797 + 45952 48891 0 2 234,178, 0,2761, +,+, 592204 LTR ERVL 585 chrUn_NT_464150v1 46216 48678 GGERVL-B-int 769 + 46216 48678 0 2 213,2247, 0,215, +,+, 592206 LTR ERVL 585 chrUn_NT_464150v1 48892 49721 GGERVL-B-int 822 - 48892 49721 0 2 248,581, 0,248, -,-, 592207 LTR ERVL 585 chrUn_NT_464150v1 49874 54000 GGERVL-C-int 532 + 49874 54000 0 4 532,205,393,56, 0,2913,3677,4070, +,+,+,+, 592208 LTR ERVL 585 chrUn_NT_464150v1 55744 60946 GGERVL18-int 611 + 55744 60946 0 2 49,652, 0,4550, +,+, 592214 LTR ERVL 585 chrUn_NT_464150v1 55793 60293 ENS1-LTR 779 + 55793 60293 0 3 932,2635,933, 0,932,3567, +,+,+, 592215 LTR ERVL 585 chrUn_NT_464151v1 3068 5006 GGXHOI 349 - 3068 5006 0 2 689,1207, 0,731, -,-, 592222 Satellite W-chromosome 585 chrUn_NT_464151v1 7154 9508 GGXHOI 344 - 7154 9508 0 2 2066,271, 0,2083, -,-, 592225 Satellite W-chromosome 585 chrUn_NT_464151v1 9653 15731 GGXHOI 367 - 9653 15731 0 4 1536,1615,1537,1286, 0,1598,3234,4792, -,-,-,-, 592226 Satellite W-chromosome 585 chrUn_NT_464151v1 15997 18513 GGXHOI 351 - 15997 18513 0 4 267,228,1574,266, 0,324,614,2250, -,-,-,-, 592227 Satellite W-chromosome 585 chrUn_NT_464151v1 18611 19373 GGXHOI 348 - 18611 19373 0 2 352,348, 0,414, -,-, 592228 Satellite W-chromosome 585 chrUn_NT_464151v1 22173 24972 GGXHOI 353 - 22173 24972 0 2 881,1856, 0,943, -,-, 592231 Satellite W-chromosome 585 chrUn_NT_464151v1 25688 27951 GGXHOI 329 - 25688 27951 0 3 266,264,1696, 0,287,567, -,-,-, 592233 Satellite W-chromosome 585 chrUn_NT_464151v1 28582 30035 GGXHOI 358 - 28582 30035 0 2 1044,388, 0,1065, -,-, 592235 Satellite W-chromosome 585 chrUn_NT_464151v1 31767 33022 GGXHOI 363 - 31767 33022 0 3 394,271,552, 0,411,703, -,-,-, 592238 Satellite W-chromosome 585 chrUn_NT_464151v1 33290 34943 GGXHOI 323 - 33290 34943 0 2 1325,265, 0,1388, -,-, 592239 Satellite W-chromosome 585 chrUn_NT_464151v1 35041 36253 GGXHOI 371 - 35041 36253 0 2 885,310, 0,902, -,-, 592240 Satellite W-chromosome 585 chrUn_NT_464151v1 38570 41622 GGXHOI 351 - 38570 41622 0 3 551,1577,844, 0,614,2208, -,-,-, 592244 Satellite W-chromosome 585 chrUn_NT_464151v1 43279 44200 GGXHOI 339 - 43279 44200 0 2 266,634, 0,287, -,-, 592247 Satellite W-chromosome 585 chrUn_NT_464151v1 44463 47110 GGXHOI 377 - 44463 47110 0 2 353,2237, 0,410, -,-, 592248 Satellite W-chromosome 585 chrUn_NT_464151v1 47140 48029 (CCTTG)n 532 + 47140 48029 0 3 139,38,514, 0,317,375, +,+,+, 592249 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 48051 48462 (CAGGC)n 322 + 48051 48462 0 2 190,161, 0,250, +,+, 592251 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 49177 49832 (CCTTG)n 526 + 49177 49832 0 2 263,213, 0,442, +,+, 592254 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 50919 51725 (CCTTG)n 539 + 50919 51725 0 2 286,500, 0,306, +,+, 592260 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 52801 53610 (CCTTG)n 536 + 52801 53610 0 2 286,503, 0,306, +,+, 592263 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 54683 55492 (CCTTG)n 536 + 54683 55492 0 2 286,503, 0,306, +,+, 592267 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 55893 56567 (CAAGG)n 562 + 55893 56567 0 2 251,234, 0,440, +,+, 592270 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 56669 57383 (CCTTG)n 492 + 56669 57383 0 2 277,257, 0,457, +,+, 592273 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 57769 58376 (CAAGG)n 536 + 57769 58376 0 3 178,197,193, 0,178,414, +,+,+, 592277 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 58430 58932 (CCTTG)n 498 + 58430 58932 0 2 287,195, 0,307, +,+, 592278 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 59655 60265 (CAAGG)n 480 + 59655 60265 0 2 373,211, 0,399, +,+, 592281 Simple_repeat Simple_repeat 585 chrUn_NT_464151v1 60319 60881 (CCTTG)n 534 + 60319 60881 0 2 336,205, 0,357, +,+, 592282 Simple_repeat Simple_repeat 585 chrUn_NT_464152v1 27482 27997 CR1-C3 653 + 27482 27997 0 2 360,155, 0,360, +,+, 592308 LINE CR1 585 chrUn_NT_464152v1 31240 31310 (CCCCA)n 404 + 31240 31310 0 2 7,28, 0,42, +,+, 592316 Simple_repeat Simple_repeat 585 chrUn_NT_464152v1 39509 41632 CR1-C4 590 - 39509 41632 0 3 677,227,98, 0,1073,2025, -,-,-, 592325 LINE CR1 585 chrUn_NT_464153v1 9840 16567 CR1-D 759 + 9840 16567 0 4 637,1988,507,51, 0,3764,6169,6676, +,+,+,+, 592349 LINE CR1 585 chrUn_NT_464153v1 10477 13585 GGERVL-A-int 704 + 10477 13585 0 3 496,1398,1214, 0,496,1894, +,+,+, 592350 LTR ERVL 585 chrUn_NT_464153v1 15592 16009 GGLTR3G2 544 + 15592 16009 0 2 370,47, 0,370, +,+, 592352 LTR ERVL 585 chrUn_NT_464153v1 17545 18312 CR1-D2 728 - 17545 18312 0 2 604,151, 0,616, -,-, 592354 LINE CR1 585 chrUn_NT_464153v1 31017 35364 GGERVL18-LTR 603 + 31017 35364 0 3 351,1661,335, 0,354,4012, +,+,+, 592373 LTR ERVL 585 chrUn_NT_464153v1 35399 44624 CR1-D 593 + 35399 44624 0 3 890,221,864, 0,3892,8361, +,+,+, 592376 LINE CR1 585 chrUn_NT_464153v1 39512 43763 CR1-G 662 + 39512 43763 0 2 136,4014, 0,237, +,+, 592378 LINE CR1 585 chrUn_NT_464153v1 51611 53616 GGERV10_LTR 486 + 51611 53616 0 2 159,1845, 0,160, +,+, 592390 LTR ERVL 585 chrUn_NT_464153v1 53616 58588 GGERVL18-int 719 + 53616 58588 0 4 46,156,1135,492, 0,525,681,4480, +,+,+,+, 592391 LTR ERVL 585 chrUn_NT_464153v1 55425 58087 CR1-F 911 - 55425 58087 0 2 2338,324, 0,2338, -,-, 592393 LINE CR1 585 chrUn_NT_464154v1 1167 1710 (CGAGG)n 516 + 1167 1710 0 3 176,127,51, 0,193,492, +,+,+, 592398 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 2877 3394 (CGAGG)n 535 + 2877 3394 0 2 323,183, 0,334, +,+, 592405 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 3579 4157 (CGAGG)n 523 + 3579 4157 0 2 182,369, 0,209, +,+, 592407 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 5919 6840 (CGAGG)n 567 + 5919 6840 0 3 511,179,198, 0,544,723, +,+,+, 592416 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 9755 10139 (CGAGG)n 506 + 9755 10139 0 2 180,184, 0,200, +,+, 592432 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 12334 13028 (CGAGG)n 544 + 12334 13028 0 2 362,304, 0,390, +,+, 592442 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 13030 13510 (CGGGG)n 562 + 13030 13510 0 2 110,192, 0,288, +,+, 592443 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 13511 13908 (CGAGG)n 529 + 13511 13908 0 2 145,198, 0,199, +,+, 592445 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 14103 14379 (CGGGG)n 522 + 14103 14379 0 2 62,38, 0,238, +,+, 592446 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 14819 15409 (CGAGG)n 543 + 14819 15409 0 3 191,180,177, 0,205,413, +,+,+, 592451 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 15745 17102 (CAAGG)n 558 + 15745 17102 0 5 480,179,177,165,101, 0,515,714,910,1256, +,+,+,+,+, 592454 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 17193 17661 (CAAGG)n 602 + 17193 17661 0 2 179,274, 0,194, +,+, 592457 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 17686 18126 (CCTTG)n 503 + 17686 18126 0 2 227,189, 0,251, +,+, 592458 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 18752 19487 (CAAGG)n 513 + 18752 19487 0 4 86,73,195,190, 0,277,350,545, +,+,+,+, 592463 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 19954 20757 (CCTTG)n 500 + 19954 20757 0 2 461,162, 0,641, +,+, 592467 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 21006 22079 (CCTTG)n 518 + 21006 22079 0 4 238,204,391,192, 0,238,474,881, +,+,+,+, 592470 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 22456 23168 (CAAGG)n 492 + 22456 23168 0 3 273,18,91, 0,426,621, +,+,+, 592474 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 23221 23487 (CAAGG)n 487 + 23221 23487 0 2 24,184, 0,82, +,+, 592478 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 23565 24262 (CCTTG)n 525 + 23565 24262 0 3 235,166,76, 0,276,621, +,+,+, 592479 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 24559 25667 (CAAGG)n 489 + 24559 25667 0 4 372,214,285,25, 0,372,614,1083, +,+,+,+, 592482 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 25757 26533 (CCTTG)n 542 + 25757 26533 0 3 314,80,188, 0,508,588, +,+,+, 592485 Simple_repeat Simple_repeat 585 chrUn_NT_464154v1 30470 32086 GGXHOI 351 - 30470 32086 0 3 431,394,753, 0,448,863, -,-,-, 592491 Satellite W-chromosome 585 chrUn_NT_464154v1 32697 34968 GGXHOI 335 - 32697 34968 0 3 268,516,1408, 0,285,863, -,-,-, 592493 Satellite W-chromosome 585 chrUn_NT_464154v1 35112 36236 GGXHOI 348 - 35112 36236 0 2 715,348, 0,776, -,-, 592494 Satellite W-chromosome 585 chrUn_NT_464154v1 37048 38511 GGXHOI 375 - 37048 38511 0 2 603,839, 0,624, -,-, 592496 Satellite W-chromosome 585 chrUn_NT_464154v1 38983 42916 GGXHOI 356 - 38983 42916 0 3 1407,1085,1360, 0,1428,2573, -,-,-, 592497 Satellite W-chromosome 585 chrUn_NT_464154v1 43084 48457 GGXHOI 356 - 43084 48457 0 2 2580,2731, 0,2642, -,-, 592498 Satellite W-chromosome 585 chrUn_NT_464154v1 50507 52416 GGXHOI 359 - 50507 52416 0 3 474,1004,348, 0,495,1561, -,-,-, 592501 Satellite W-chromosome 585 chrUn_NT_464154v1 56866 58872 GGXHOI 335 - 56866 58872 0 2 472,1513, 0,493, -,-, 592505 Satellite W-chromosome 585 chrUn_NT_464155v1 1479 7538 GGERVL18-LTR 684 - 1479 7538 0 3 346,5370,342, 0,346,5717, -,-,-, 592507 LTR ERVL 585 chrUn_NT_464155v1 10790 16214 GGERVL-B-int 644 + 10790 16214 0 5 563,344,1301,240,1449, 0,563,1276,2579,3975, +,+,+,+,+, 592509 LTR ERVL 585 chrUn_NT_464155v1 19954 20861 CR1-D 676 - 19954 20861 0 2 567,314, 0,593, -,-, 592515 LINE CR1 585 chrUn_NT_464155v1 22096 25688 GGERV20_I-int 233 - 22096 25688 0 3 1118,1707,339, 0,1348,3253, -,-,-, 592519 LTR ERVL 585 chrUn_NT_464155v1 25978 26318 GGERV10_LTR 651 - 25978 26318 0 2 159,91, 0,249, -,-, 592523 LTR ERVL 585 chrUn_NT_464155v1 27887 28914 CR1-H 796 - 27887 28914 0 2 93,333, 0,694, -,-, 592525 LINE CR1 585 chrUn_NT_464155v1 33900 35084 CR1-E 774 + 33900 35084 0 2 154,474, 0,710, +,+, 592536 LINE CR1 585 chrUn_NT_464155v1 40687 41327 CR1-D 834 + 40687 41327 0 2 37,56, 0,584, +,+, 592543 LINE CR1 585 chrUn_NT_464155v1 49623 51440 GGERVL-B-int 804 - 49623 51440 0 3 545,1010,261, 0,545,1556, -,-,-, 592552 LTR ERVL 585 chrUn_NT_464155v1 53017 58509 GGLTR3F1 900 - 53017 58509 0 2 494,4998, 0,494, -,-, 592555 LTR ERVL 586 chrUn_NT_464155v1 214552 215946 GGLTR10D 919 + 214552 215946 0 2 1048,346, 0,1048, +,+, 592556 LTR ERVK 586 chrUn_NT_464155v1 216291 216622 GGERV10_LTR 941 + 216291 216622 0 2 111,220, 0,111, +,+, 592558 LTR ERVL 586 chrUn_NT_464155v1 217696 222221 GGLTR7-int 477 - 217696 222221 0 7 527,739,610,1185,90,274,332, 0,633,1472,2082,3269,3919,4193, -,-,-,-,-,-,-, 592561 LTR ERV1 586 chrUn_NT_464155v1 223931 226488 GGERVL-A-int 798 + 223931 226488 0 3 1359,595,602, 0,1360,1955, +,+,+, 592565 LTR ERVL 585 chrUn_NT_464156v1 723 1828 GGERVL-A-int 299 - 723 1828 0 3 109,242,529, 0,199,576, -,-,-, 592567 LTR ERVL 585 chrUn_NT_464156v1 6667 7127 CR1-X2 414 + 6667 7127 0 2 242,209, 0,251, +,+, 592575 LINE CR1 585 chrUn_NT_464156v1 29939 32435 GGLTR7-int 276 - 29939 32435 0 4 73,370,465,238, 0,261,1120,2258, -,-,-,-, 592593 LTR ERV1 585 chrUn_NT_464156v1 38758 41183 GGERVL-C-int 223 + 38758 41183 0 2 248,251, 0,2174, +,+, 592596 LTR ERVL 585 chrUn_NT_464156v1 52123 52580 CR1-H 677 + 52123 52580 0 2 296,161, 0,296, +,+, 592614 LINE CR1 585 chrUn_NT_464156v1 55418 56045 CR1-H 692 + 55418 56045 0 2 469,139, 0,488, +,+, 592617 LINE CR1 585 chrUn_NT_464157v1 11625 13354 GGXHOI 294 + 11625 13354 0 2 251,1436, 0,293, +,+, 592627 Satellite W-chromosome 585 chrUn_NT_464157v1 13452 17046 GGXHOI 375 + 13452 17046 0 3 1378,696,1436, 0,1420,2158, +,+,+, 592628 Satellite W-chromosome 585 chrUn_NT_464157v1 19340 25465 GGXHOI 371 + 19340 25465 0 3 1164,2880,1967, 0,1221,4158, +,+,+, 592630 Satellite W-chromosome 585 chrUn_NT_464157v1 25799 29713 GGXHOI 342 + 25799 29713 0 3 215,2673,927, 0,272,2987, +,+,+, 592631 Satellite W-chromosome 585 chrUn_NT_464157v1 29814 54939 GGXHOI 379 + 29814 54939 0 10 2482,2912,2912,2912,2912,2912,1434,4390,1436,445, 0,2524,5478,8432,11386,14340,17294,18770,23202,24680, +,+,+,+,+,+,+,+,+,+, 592632 Satellite W-chromosome 585 chrUn_NT_464157v1 57008 57620 GGXHOI 378 + 57008 57620 0 2 182,367, 0,245, +,+, 592634 Satellite W-chromosome 585 chrUn_NT_464158v1 7051 8229 GGXHOI 392 + 7051 8229 0 2 615,521, 0,657, +,+, 592637 Satellite W-chromosome 585 chrUn_NT_464158v1 8337 9754 GGXHOI 431 + 8337 9754 0 2 601,772, 0,645, +,+, 592638 Satellite W-chromosome 585 chrUn_NT_464158v1 9888 30707 GGXHOI 422 + 9888 30707 0 13 1808,1884,720,609,721,1328,609,3810,722,609,1257,3288,3047, 0,1850,3776,4515,5166,5906,7295,7946,11798,12539,13190,14468,17772, +,+,+,+,+,+,+,+,+,+,+,+,+, 592639 Satellite W-chromosome 585 chrUn_NT_464158v1 31740 32980 GGXHOI 371 + 31740 32980 0 2 688,510, 0,730, +,+, 592641 Satellite W-chromosome 585 chrUn_NT_464158v1 33246 35226 GGXHOI 426 + 33246 35226 0 2 1362,603, 0,1377, +,+, 592642 Satellite W-chromosome 585 chrUn_NT_464158v1 35518 35882 GGXHOI 452 + 35518 35882 0 2 159,158, 0,206, +,+, 592643 Satellite W-chromosome 585 chrUn_NT_464158v1 37848 48724 GGXHOI 412 + 37848 48724 0 4 638,6640,1350,2146, 0,656,7338,8730, +,+,+,+, 592645 Satellite W-chromosome 585 chrUn_NT_464158v1 50168 56173 GGXHOI 414 + 50168 56173 0 5 1428,609,1139,704,1981, 0,1447,2098,3278,4024, +,+,+,+,+, 592647 Satellite W-chromosome 585 chrUn_NT_464158v1 56294 57683 GGXHOI 319 + 56294 57683 0 2 108,1258, 0,131, +,+, 592648 Satellite W-chromosome 585 chrUn_NT_464159v1 36206 36952 CR1-F 313 - 36206 36952 0 2 559,172, 0,574, -,-, 592676 LINE CR1 585 chrUn_NT_464159v1 49512 50000 CR1-Y4 627 - 49512 50000 0 2 288,195, 0,293, -,-, 592686 LINE CR1 585 chrUn_NT_464159v1 53220 56885 GGERV28_I-int 159 + 53220 56885 0 4 130,625,206,1513, 0,546,1433,2152, +,+,+,+, 592690 LTR ERVK 585 chrUn_NT_464160v1 19240 20949 CR1-G 533 + 19240 20949 0 3 600,135,385, 0,872,1324, +,+,+, 592697 LINE CR1 585 chrUn_NT_464160v1 25052 26996 CR1-C 598 + 25052 26996 0 2 418,823, 0,1121, +,+, 592707 LINE CR1 585 chrUn_NT_464161v1 714 838 GGLTR10C2 681 - 714 838 0 2 67,54, 0,70, -,-, 592732 LTR ERVK 585 chrUn_NT_464161v1 8831 10236 GGLTR3E3 676 - 8831 10236 0 2 866,538, 0,867, -,-, 592735 LTR ERVL 585 chrUn_NT_464161v1 10595 11288 GGERVL18-int 605 - 10595 11288 0 2 98,595, 0,98, -,-, 592739 LTR ERVL 585 chrUn_NT_464161v1 13825 27534 GGERV28_LTR 857 + 13825 27534 0 4 477,205,6556,477, 0,477,6676,13232, +,+,+,+, 592745 LTR ERVK 585 chrUn_NT_464161v1 14539 20344 GGLTR3F1 870 + 14539 20344 0 2 496,5307, 0,498, +,+, 592746 LTR ERVL 585 chrUn_NT_464161v1 20344 20515 GGLTR3F1 844 + 20344 20515 0 2 36,135, 0,36, +,+, 592747 LTR ERVL 585 chrUn_NT_464161v1 27565 28551 CR1-B2 715 + 27565 28551 0 3 118,111,484, 0,118,502, +,+,+, 592748 LINE CR1 585 chrUn_NT_464161v1 46876 52516 CR1-C4 507 + 46876 52516 0 2 851,34, 0,5606, +,+, 592757 LINE CR1 585 chrUn_NT_464161v1 47727 52224 GGERVL-B-int 825 + 47727 52224 0 3 486,2673,1333, 0,488,3164, +,+,+, 592758 LTR ERVL 585 chrUn_NT_464162v1 53096 53371 (CGAGG)n 516 + 53096 53371 0 2 57,25, 0,250, +,+, 592763 Simple_repeat Simple_repeat 585 chrUn_NT_464163v1 1034 1938 GGERVL-A-int 155 - 1034 1938 0 2 241,528, 0,376, -,-, 592767 LTR ERVL 585 chrUn_NT_464163v1 6969 7437 CR1-X2 345 + 6969 7437 0 2 236,161, 0,307, +,+, 592774 LINE CR1 585 chrUn_NT_464163v1 29289 32461 GGLTR7-int 274 - 29289 32461 0 5 98,311,60,297,238, 0,1105,1675,1964,2934, -,-,-,-,-, 592791 LTR ERV1 585 chrUn_NT_464163v1 40916 41264 CR1-X2 343 - 40916 41264 0 2 41,236, 0,112, -,-, 592798 LINE CR1 585 chrUn_NT_464163v1 46387 47158 GGERVL-C-int 151 + 46387 47158 0 2 270,239, 0,532, +,+, 592807 LTR ERVL 585 chrUn_NT_464164v1 882 3717 GGXHOI 350 + 882 3717 0 2 1350,1443, 0,1392, +,+, 592815 Satellite W-chromosome 585 chrUn_NT_464164v1 3978 8559 GGXHOI 351 + 3978 8559 0 3 2699,1426,370, 0,2743,4211, +,+,+, 592816 Satellite W-chromosome 585 chrUn_NT_464164v1 9245 10365 (CCTTG)n 477 + 9245 10365 0 4 357,65,212,267, 0,385,628,853, +,+,+,+, 592818 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 10723 11614 (CAAGG)n 499 + 10723 11614 0 2 614,261, 0,630, +,+, 592821 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 12057 12733 (CCTTG)n 515 + 12057 12733 0 2 363,313, 0,363, +,+, 592825 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 13109 13933 (CAAGG)n 490 + 13109 13933 0 3 379,184,203, 0,424,621, +,+,+, 592827 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 14002 14474 (CCTTG)n 427 + 14002 14474 0 2 190,268, 0,204, +,+, 592828 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 14531 14886 (GCCTG)n 234 + 14531 14886 0 2 85,254, 0,101, +,+, 592831 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 14908 15694 (CAAGG)n 474 + 14908 15694 0 2 140,466, 0,320, +,+, 592832 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 15794 16095 (CAAGG)n 548 + 15794 16095 0 2 97,25, 0,276, +,+, 592835 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 16139 17469 GGERVL-B-int 769 - 16139 17469 0 2 1196,134, 0,1196, -,-, 592837 LTR ERVL 585 chrUn_NT_464164v1 17540 18076 (CACTC)n 361 + 17540 18076 0 2 271,214, 0,322, +,+, 592839 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 18193 18721 (CACTC)n 400 + 18193 18721 0 2 181,322, 0,206, +,+, 592841 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 18798 19141 (CACTC)n 422 + 18798 19141 0 2 183,149, 0,194, +,+, 592844 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 19798 20523 (CACTC)n 440 + 19798 20523 0 3 178,182,327, 0,195,398, +,+,+, 592847 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 21231 22018 (CACTC)n 413 + 21231 22018 0 3 175,194,357, 0,198,430, +,+,+, 592850 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 22102 32875 GGLTR7-int 639 - 22102 32875 0 4 3530,244,583,2871, 0,4067,7318,7902, -,-,-,-, 592851 LTR ERV1 585 chrUn_NT_464164v1 26747 27179 (GAGTG)n 357 + 26747 27179 0 3 32,194,178, 0,49,254, +,+,+, 592854 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 27598 28176 (CACTC)n 401 + 27598 28176 0 2 365,176, 0,402, +,+, 592855 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 28778 29399 (CACTC)n 411 + 28778 29399 0 3 179,191,177, 0,216,444, +,+,+, 592860 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 35314 35887 (CACTC)n 419 + 35314 35887 0 3 191,166,180, 0,204,393, +,+,+, 592865 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 38286 38869 (CACTC)n 403 + 38286 38869 0 2 353,191, 0,392, +,+, 592872 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 40893 41191 (GAGTG)n 418 + 40893 41191 0 2 114,167, 0,131, +,+, 592881 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 41953 42747 GGERVL-B-int 713 + 41953 42747 0 3 436,186,170, 0,438,624, +,+,+, 592884 LTR ERVL 585 chrUn_NT_464164v1 42742 47069 GGLTR3E1 565 - 42742 47069 0 3 3476,407,147, 0,3478,4180, -,-,-, 592885 LTR ERVL 585 chrUn_NT_464164v1 47136 47645 (GAGTG)n 406 + 47136 47645 0 2 297,194, 0,315, +,+, 592888 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 47797 48797 (GAGTG)n 429 + 47797 48797 0 3 341,181,438, 0,354,562, +,+,+, 592890 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 48992 49826 (GAGTG)n 407 + 48992 49826 0 3 188,442,180, 0,200,654, +,+,+, 592892 Simple_repeat Simple_repeat 585 chrUn_NT_464164v1 50343 52172 GGLTR7-int 643 - 50343 52172 0 3 587,355,878, 0,593,951, -,-,-, 592894 LTR ERV1 585 chrUn_NT_464165v1 7126 10768 GGLTR7A 767 - 7126 10768 0 4 61,243,2730,604, 0,64,307,3038, -,-,-,-, 592902 LTR ERV1 585 chrUn_NT_464165v1 14146 14758 CR1-H 651 + 14146 14758 0 2 202,88, 0,524, +,+, 592909 LINE CR1 585 chrUn_NT_464165v1 15311 15822 CR1-G 359 + 15311 15822 0 2 182,186, 0,325, +,+, 592911 LINE CR1 585 chrUn_NT_464165v1 19164 19572 GGERVL18-LTR 674 + 19164 19572 0 2 52,133, 0,275, +,+, 592916 LTR ERVL 585 chrUn_NT_464165v1 20808 25298 CR1-H 310 - 20808 25298 0 3 604,186,226, 0,3987,4264, -,-,-, 592917 LINE CR1 585 chrUn_NT_464165v1 21444 21660 CR1-F 745 - 21444 21660 0 3 53,124,39, 0,53,177, -,-,-, 592919 LINE CR1 585 chrUn_NT_464165v1 28282 31972 GGLTR7-int 445 + 28282 31972 0 3 2932,241,289, 0,2977,3401, +,+,+, 592925 LTR ERV1 585 chrUn_NT_464165v1 32216 33475 CR1-F2 352 + 32216 33475 0 3 182,124,655, 0,480,604, +,+,+, 592926 LINE CR1 585 chrUn_NT_464165v1 39184 40527 CR1-B 905 - 39184 40527 0 2 631,707, 0,636, -,-, 592931 LINE CR1 585 chrUn_NT_464165v1 40579 41099 CR1-F 861 + 40579 41099 0 2 70,450, 0,70, +,+, 592933 LINE CR1 585 chrUn_NT_464165v1 41103 41684 CR1-C 617 - 41103 41684 0 2 399,182, 0,399, -,-, 592934 LINE CR1 585 chrUn_NT_464165v1 42595 46517 CR1-C2 647 - 42595 46517 0 5 260,468,294,398,187, 0,260,1190,3337,3735, -,-,-,-,-, 592939 LINE CR1 585 chrUn_NT_464165v1 47427 51333 CR1-C 564 - 47427 51333 0 5 40,475,294,379,188, 0,256,1192,3339,3718, -,-,-,-,-, 592946 LINE CR1 585 chrUn_NT_464165v1 52268 52690 CR1-C2 565 - 52268 52690 0 2 219,203, 0,219, -,-, 592953 LINE CR1 585 chrUn_NT_464166v1 3443 3531 CR1-E 743 + 3443 3531 0 2 45,43, 0,45, +,+, 592962 LINE CR1 585 chrUn_NT_464166v1 14371 14773 CR1-C4 562 - 14371 14773 0 2 60,46, 0,356, -,-, 592973 LINE CR1 585 chrUn_NT_464166v1 15293 15491 CR1-X2 233 + 15293 15491 0 2 91,62, 0,136, +,+, 592981 LINE CR1 585 chrUn_NT_464166v1 18815 19305 CR1-Y4 439 + 18815 19305 0 3 190,100,47, 0,201,443, +,+,+, 592991 LINE CR1 585 chrUn_NT_464166v1 25472 27935 CR1-E 475 + 25472 27935 0 2 58,54, 0,2409, +,+, 592999 LINE CR1 585 chrUn_NT_464166v1 27629 27849 CR1-C4 349 + 27629 27849 0 2 35,142, 0,78, +,+, 593003 LINE CR1 585 chrUn_NT_464166v1 30698 31194 (CAGCT)n 314 + 30698 31194 0 2 201,256, 0,240, +,+, 593010 Simple_repeat Simple_repeat 585 chrUn_NT_464166v1 35080 35228 CR1-Y2 590 - 35080 35228 0 2 60,69, 0,79, -,-, 593017 LINE CR1 585 chrUn_NT_464166v1 42072 42320 CR1-Y2 621 - 42072 42320 0 2 111,81, 0,167, -,-, 593031 LINE CR1 585 chrUn_NT_464168v1 3656 9922 GGERVL-B-int 749 - 3656 9922 0 6 359,83,45,331,82,496, 0,361,1123,4861,5688,5770, -,-,-,-,-,-, 593077 LTR ERVL 585 chrUn_NT_464168v1 4824 8325 ENS3-int 850 + 4824 8325 0 2 832,2665, 0,836, +,+, 593080 LTR ERVL 585 chrUn_NT_464168v1 8324 8517 ENS1-int 922 + 8324 8517 0 2 76,81, 0,112, +,+, 593081 LTR ERVL 585 chrUn_NT_464168v1 9984 18664 GGERVL18-int 491 + 9984 18664 0 2 727,1011, 0,7669, +,+, 593083 LTR ERVL 585 chrUn_NT_464168v1 10712 14617 GGERV10_LTR 766 - 10712 14617 0 3 160,62,3583, 0,260,322, -,-,-, 593084 LTR ERVL 585 chrUn_NT_464168v1 14617 15576 ENS1B-LTR 607 + 14617 15576 0 2 361,478, 0,481, +,+, 593085 LTR ERVL 585 chrUn_NT_464168v1 15577 17653 GGERV10_LTR 695 - 15577 17653 0 3 1753,160,62, 0,1754,2014, -,-,-, 593086 LTR ERVL 585 chrUn_NT_464168v1 20520 31290 GGERVL-A-int 690 + 20520 31290 0 7 439,519,1194,1227,209,1062,115, 0,439,1508,6067,7471,9589,10655, +,+,+,+,+,+,+, 593089 LTR ERVL 585 chrUn_NT_464168v1 23226 26585 GGLTR10D 949 - 23226 26585 0 3 346,2667,346, 0,346,3013, -,-,-, 593091 LTR ERVK 585 chrUn_NT_464168v1 33347 33979 GGLTR7A 798 - 33347 33979 0 2 38,586, 0,46, -,-, 593103 LTR ERV1 585 chrUn_NT_464168v1 33962 37404 GGERV10_LTR 876 + 33962 37404 0 3 62,158,3116, 0,167,326, +,+,+, 593104 LTR ERVL 585 chrUn_NT_464168v1 37410 38245 GGERVL-B-int 498 + 37410 38245 0 2 478,320, 0,515, +,+, 593105 LTR ERVL 585 chrUn_NT_464168v1 38245 39819 GGERVL-B-int 737 + 38245 39819 0 2 483,1088, 0,486, +,+, 593107 LTR ERVL 585 chrUn_NT_464168v1 39812 41091 GGLTR3F2 781 - 39812 41091 0 3 284,145,325, 0,286,954, -,-,-, 593108 LTR ERVL 585 chrUn_NT_464168v1 41092 43276 GGERVL-A-int 852 + 41092 43276 0 3 476,1237,470, 0,477,1714, +,+,+, 593110 LTR ERVL 585 chrUn_NT_464168v1 43738 44124 (CACTC)n 326 + 43738 44124 0 2 175,180, 0,206, +,+, 593113 Simple_repeat Simple_repeat 585 chrUn_NT_464168v1 46116 49931 GGERV28_I-int 289 - 46116 49931 0 3 51,1990,363, 0,1150,3452, -,-,-, 593118 LTR ERVK 585 chrUn_NT_464168v1 46168 47027 GGLTR7A 774 - 46168 47027 0 4 350,259,186,42, 0,350,631,817, -,-,-,-, 593119 LTR ERV1 585 chrUn_NT_464169v1 8544 10168 GGXHOI 383 + 8544 10168 0 2 472,1089, 0,535, +,+, 593132 Satellite W-chromosome 585 chrUn_NT_464169v1 14399 16627 GGXHOI 380 + 14399 16627 0 2 1081,1086, 0,1142, +,+, 593140 Satellite W-chromosome 585 chrUn_NT_464169v1 23334 23755 GGXHOI 306 + 23334 23755 0 2 142,258, 0,163, +,+, 593151 Satellite W-chromosome 585 chrUn_NT_464169v1 29119 30735 GGXHOI 389 + 29119 30735 0 2 1037,516, 0,1100, +,+, 593159 Satellite W-chromosome 585 chrUn_NT_464169v1 30834 31885 GGXHOI 392 + 30834 31885 0 2 472,516, 0,535, +,+, 593160 Satellite W-chromosome 585 chrUn_NT_464169v1 31984 33035 GGXHOI 392 + 31984 33035 0 2 472,516, 0,535, +,+, 593161 Satellite W-chromosome 585 chrUn_NT_464169v1 33134 34185 GGXHOI 392 + 33134 34185 0 2 472,516, 0,535, +,+, 593162 Satellite W-chromosome 585 chrUn_NT_464169v1 34284 35335 GGXHOI 392 + 34284 35335 0 2 472,516, 0,535, +,+, 593163 Satellite W-chromosome 585 chrUn_NT_464169v1 35434 36162 GGXHOI 389 + 35434 36162 0 2 472,194, 0,534, +,+, 593164 Satellite W-chromosome 585 chrUn_NT_464169v1 36478 37529 GGXHOI 392 + 36478 37529 0 2 472,516, 0,535, +,+, 593166 Satellite W-chromosome 585 chrUn_NT_464169v1 39930 40981 GGXHOI 392 + 39930 40981 0 2 472,516, 0,535, +,+, 593170 Satellite W-chromosome 585 chrUn_NT_464169v1 41080 42131 GGXHOI 392 + 41080 42131 0 2 472,516, 0,535, +,+, 593171 Satellite W-chromosome 585 chrUn_NT_464169v1 42230 43281 GGXHOI 392 + 42230 43281 0 2 472,516, 0,535, +,+, 593172 Satellite W-chromosome 585 chrUn_NT_464169v1 44524 45575 GGXHOI 392 + 44524 45575 0 2 472,516, 0,535, +,+, 593175 Satellite W-chromosome 585 chrUn_NT_464169v1 45674 46725 GGXHOI 392 + 45674 46725 0 2 472,516, 0,535, +,+, 593176 Satellite W-chromosome 585 chrUn_NT_464169v1 46824 47874 GGXHOI 391 + 46824 47874 0 2 472,515, 0,535, +,+, 593177 Satellite W-chromosome 585 chrUn_NT_464170v1 22853 23134 CR1-X2 387 - 22853 23134 0 2 218,63, 0,218, -,-, 593195 LINE CR1 585 chrUn_NT_464170v1 24107 31361 Z-REP 835 + 24107 31361 0 2 1645,5561, 0,1693, +,+, 593197 Satellite macro 585 chrUn_NT_464170v1 48556 48825 CR1-X2 349 - 48556 48825 0 2 204,65, 0,204, -,-, 593209 LINE CR1 585 chrUn_NT_464171v1 7683 8091 (TTAGGG)n 567 + 7683 8091 0 2 203,179, 0,229, +,+, 593216 Simple_repeat Simple_repeat 585 chrUn_NT_464171v1 8104 9987 GGERVL-B-int 735 - 8104 9987 0 4 247,524,390,195, 0,247,1298,1688, -,-,-,-, 593217 LTR ERVL 585 chrUn_NT_464171v1 12001 19649 GGLTR7A 840 + 12001 19649 0 3 609,6434,604, 0,609,7044, +,+,+, 593220 LTR ERV1 585 chrUn_NT_464171v1 21504 26327 CR1-C2 550 + 21504 26327 0 2 130,138, 0,4685, +,+, 593227 LINE CR1 585 chrUn_NT_464171v1 22600 25415 GGLTR7A 885 - 22600 25415 0 2 2206,609, 0,2206, -,-, 593231 LTR ERV1 585 chrUn_NT_464171v1 27431 29318 GGERVL-B-int 731 + 27431 29318 0 4 195,390,524,251, 0,195,1112,1636, +,+,+,+, 593232 LTR ERVL 585 chrUn_NT_464171v1 29331 29739 (CCCTAA)n 562 + 29331 29739 0 2 179,203, 0,205, +,+, 593234 Simple_repeat Simple_repeat 585 chrUn_NT_464171v1 41442 41849 (TTAGGG)n 561 + 41442 41849 0 2 172,179, 0,228, +,+, 593245 Simple_repeat Simple_repeat 585 chrUn_NT_464171v1 41862 43745 GGERVL-B-int 733 - 41862 43745 0 4 247,524,390,195, 0,247,1298,1688, -,-,-,-, 593246 LTR ERVL 585 chrUn_NT_464171v1 44834 48828 CR1-C2 705 - 44834 48828 0 2 74,157, 0,3837, -,-, 593248 LINE CR1 585 chrUn_NT_464171v1 45736 48472 GGLTR7A 799 + 45736 48472 0 2 593,2142, 0,594, +,+, 593250 LTR ERV1 585 chrUn_NT_464172v1 621 1256 (CGAGG)n 515 + 621 1256 0 2 451,172, 0,463, +,+, 593258 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 1376 2775 (CGAGG)n 534 + 1376 2775 0 2 629,590, 0,809, +,+, 593260 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 2919 4155 (CGAGG)n 527 + 2919 4155 0 4 538,253,187,183, 0,551,845,1053, +,+,+,+, 593263 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 5688 6396 (CGAGG)n 543 + 5688 6396 0 4 113,20,195,172, 0,292,323,536, +,+,+,+, 593270 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 6562 7593 (CGAGG)n 530 + 6562 7593 0 2 614,404, 0,627, +,+, 593273 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 7881 8537 (CGAGG)n 549 + 7881 8537 0 2 254,355, 0,301, +,+, 593277 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 8627 9912 (CGAGG)n 532 + 8627 9912 0 2 1053,54, 0,1231, +,+, 593279 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 12183 13143 (CGAGG)n 509 + 12183 13143 0 2 254,666, 0,294, +,+, 593292 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 13242 14508 (CGAGG)n 522 + 13242 14508 0 3 627,175,424, 0,654,842, +,+,+, 593294 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 15111 15696 (CGAGG)n 509 + 15111 15696 0 2 389,176, 0,409, +,+, 593296 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 15694 17107 (CCTCG)n 602 + 15694 17107 0 4 368,12,287,83, 0,670,858,1330, +,+,+,+, 593297 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 18143 18974 (CCTCG)n 566 + 18143 18974 0 2 406,392, 0,439, +,+, 593306 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 19049 19843 (CCTCG)n 549 + 19049 19843 0 2 272,497, 0,297, +,+, 593307 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 20941 22347 (CCTCG)n 548 + 20941 22347 0 2 1153,72, 0,1334, +,+, 593312 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 22422 23100 (CCTCG)n 580 + 22422 23100 0 2 185,237, 0,441, +,+, 593314 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 23617 25942 (CCTCG)n 559 + 23617 25942 0 5 429,383,373,184,702, 0,459,1018,1428,1623, +,+,+,+,+, 593318 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 26773 27398 (CCTCG)n 510 + 26773 27398 0 3 178,199,69, 0,189,556, +,+,+, 593325 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 28272 28749 (CCTCG)n 514 + 28272 28749 0 2 182,271, 0,206, +,+, 593334 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 28791 29779 (CCTCG)n 525 + 28791 29779 0 2 236,731, 0,257, +,+, 593336 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 30555 32063 (CCTCG)n 523 + 30555 32063 0 3 658,197,432, 0,836,1076, +,+,+, 593342 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 32183 33456 (CCTCG)n 549 + 32183 33456 0 4 177,427,122,325, 0,190,796,948, +,+,+,+, 593344 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 33510 34185 (CCTCG)n 569 + 33510 34185 0 3 174,102,343, 0,203,332, +,+,+, 593347 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 34420 35237 (CCTCG)n 474 + 34420 35237 0 2 608,179, 0,638, +,+, 593349 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 35619 36176 (CCTCG)n 518 + 35619 36176 0 2 367,174, 0,383, +,+, 593351 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 36247 36609 (CCTCG)n 424 + 36247 36609 0 2 152,192, 0,170, +,+, 593352 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 38092 38985 (CCTCG)n 559 + 38092 38985 0 4 187,177,238,227, 0,217,411,666, +,+,+,+, 593357 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 41005 42031 (CCTCG)n 470 + 41005 42031 0 2 258,588, 0,438, +,+, 593368 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 42329 42791 (CCTCG)n 520 + 42329 42791 0 2 89,193, 0,269, +,+, 593373 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 43040 43643 (CCTCG)n 536 + 43040 43643 0 2 319,264, 0,339, +,+, 593377 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 44120 45276 (CCTCG)n 525 + 44120 45276 0 2 599,545, 0,611, +,+, 593381 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 46209 47674 (CCTCG)n 528 + 46209 47674 0 4 140,448,344,322, 0,318,777,1143, +,+,+,+, 593384 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 48013 48557 (CCTCG)n 580 + 48013 48557 0 2 332,212, 0,332, +,+, 593388 Simple_repeat Simple_repeat 585 chrUn_NT_464172v1 48793 49704 (CCTCG)n 540 + 48793 49704 0 4 191,200,93,211, 0,191,424,700, +,+,+,+, 593392 Simple_repeat Simple_repeat 585 chrUn_NT_464173v1 4301 5045 CR1-F2 501 + 4301 5045 0 3 82,27,90, 0,495,654, +,+,+, 593397 LINE CR1 585 chrUn_NT_464173v1 5142 5869 CR1-F2 519 + 5142 5869 0 3 11,27,81, 0,479,646, +,+,+, 593404 LINE CR1 585 chrUn_NT_464173v1 5893 6200 CR1-H2 459 + 5893 6200 0 3 57,83,82, 0,142,225, +,+,+, 593411 LINE CR1 585 chrUn_NT_464173v1 6366 9579 CR1-H 451 + 6366 9579 0 2 82,72, 0,3141, +,+, 593415 LINE CR1 585 chrUn_NT_464173v1 7530 8060 (ACCCCATAGGG)n 436 + 7530 8060 0 2 359,111, 0,419, +,+, 593418 Satellite Satellite 585 chrUn_NT_464173v1 16149 16466 CR1-F0 438 + 16149 16466 0 2 82,76, 0,241, +,+, 593434 LINE CR1 585 chrUn_NT_464173v1 16467 17534 CR1-F0 540 + 16467 17534 0 3 82,68,75, 0,917,992, +,+,+, 593436 LINE CR1 585 chrUn_NT_464173v1 16657 17288 CR1-F0 451 + 16657 17288 0 8 57,75,57,75,57,74,57,82, 0,64,164,228,328,393,492,549, +,+,+,+,+,+,+,+, 593438 LINE CR1 585 chrUn_NT_464173v1 19855 20508 CR1-Y4 337 + 19855 20508 0 2 169,339, 0,314, +,+, 593442 LINE CR1 585 chrUn_NT_464173v1 25317 25416 (CCAAC)n 800 + 25317 25416 0 2 36,31, 0,68, +,+, 593451 Simple_repeat Simple_repeat 585 chrUn_NT_464173v1 36797 37002 CR1-D 555 - 36797 37002 0 3 59,49,49, 0,83,156, -,-,-, 593464 LINE CR1 585 chrUn_NT_464173v1 44577 44642 (CCTCCT)n 496 + 44577 44642 0 2 10,20, 0,45, +,+, 593490 Simple_repeat Simple_repeat 585 chrUn_NT_464174v1 2252 5494 GGERVL-A-int 195 + 2252 5494 0 3 215,333,1012, 0,653,2230, +,+,+, 593498 LTR ERVL 585 chrUn_NT_464174v1 6554 7043 GGLTR3F2 654 + 6554 7043 0 2 229,213, 0,276, +,+, 593506 LTR ERVL 585 chrUn_NT_464174v1 12087 15458 GGLTR10D 964 + 12087 15458 0 3 346,2679,346, 0,346,3025, +,+,+, 593511 LTR ERVK 585 chrUn_NT_464174v1 20068 23367 GGERVL-A-int 229 - 20068 23367 0 3 1013,251,246, 0,2323,3053, -,-,-, 593520 LTR ERVL 585 chrUn_NT_464174v1 24644 26337 CR1-E 796 + 24644 26337 0 2 638,758, 0,935, +,+, 593528 LINE CR1 585 chrUn_NT_464174v1 30636 33238 GGLTR11-int 619 - 30636 33238 0 3 94,526,721, 0,140,1881, -,-,-, 593536 LTR ERV1 585 chrUn_NT_464174v1 33238 35153 GGERVL18-int 727 - 33238 35153 0 3 132,707,549, 0,132,1366, -,-,-, 593540 LTR ERVL 585 chrUn_NT_464174v1 39091 42912 GGERVL18-int 659 - 39091 42912 0 2 66,2803, 0,1018, -,-, 593544 LTR ERVL 585 chrUn_NT_464174v1 44862 46307 GGLTR7-int 805 - 44862 46307 0 5 339,48,608,216,217, 0,339,387,995,1228, -,-,-,-,-, 593547 LTR ERV1 585 chrUn_NT_464174v1 46545 49101 GGERV28_I-int 185 - 46545 49101 0 2 1983,270, 0,2286, -,-, 593548 LTR ERVK 585 chrUn_NT_464175v1 40995 41362 (GCATG)n 367 + 40995 41362 0 2 177,177, 0,190, +,+, 593582 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 17498 17623 (GGGGACAT)n 800 + 17498 17623 0 2 47,47, 0,78, +,+, 593599 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 17727 17869 (GGGGACAT)n 750 + 17727 17869 0 2 47,63, 0,79, +,+, 593600 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 18558 18793 (GGGGACAT)n 767 + 18558 18793 0 3 63,62,47, 0,95,188, +,+,+, 593603 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 18897 19039 (GGGGACAT)n 769 + 18897 19039 0 2 63,47, 0,95, +,+, 593604 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 19460 19818 (GGGGACAT)n 765 + 19460 19818 0 4 63,63,47,63, 0,95,190,295, +,+,+,+, 593607 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 21908 21994 (G)n 822 + 21908 21994 0 2 25,23, 0,63, +,+, 593610 Simple_repeat Simple_repeat 585 chrUn_NT_464176v1 36528 36597 (CCCCAAC)n 332 + 36528 36597 0 2 12,8, 0,61, +,+, 593626 Simple_repeat Simple_repeat 585 chrUn_NT_464177v1 9701 13885 GGERV28_I-int 124 + 9701 13885 0 3 130,1447,1994, 0,435,2190, +,+,+, 593648 LTR ERVK 585 chrUn_NT_464177v1 14120 14972 GGLTR7-int 755 + 14120 14972 0 3 213,267,350, 0,235,502, +,+,+, 593649 LTR ERV1 585 chrUn_NT_464177v1 24747 25234 GGLTR3F2 628 + 24747 25234 0 2 232,211, 0,276, +,+, 593655 LTR ERVL 585 chrUn_NT_464177v1 26231 26876 GGERVK10-int 393 - 26231 26876 0 3 62,141,105, 0,225,540, -,-,-, 593658 LTR ERVK 585 chrUn_NT_464177v1 37649 37948 GGLTR3E1 747 - 37649 37948 0 2 138,161, 0,138, -,-, 593667 LTR ERVL 585 chrUn_NT_464177v1 40488 42519 CR1-H 766 - 40488 42519 0 2 1734,297, 0,1734, -,-, 593670 LINE CR1 585 chrUn_NT_464178v1 10315 10530 GA-rich 357 + 10315 10530 0 2 66,114, 0,101, +,+, 593678 Low_complexity Low_complexity 585 chrUn_NT_464178v1 18725 20779 GGLTR7-int 417 + 18725 20779 0 3 205,318,278, 0,1458,1776, +,+,+, 593690 LTR ERV1 585 chrUn_NT_464178v1 20791 23013 GGERV10_LTR 847 - 20791 23013 0 2 37,41, 0,2181, -,-, 593692 LTR ERVL 585 chrUn_NT_464178v1 20950 22971 GGLTR10D-int 713 - 20950 22971 0 4 358,692,224,650, 0,361,1053,1371, -,-,-,-, 593693 LTR ERVK 585 chrUn_NT_464178v1 26218 26632 (CGAGG)n 519 + 26218 26632 0 2 176,180, 0,234, +,+, 593700 Simple_repeat Simple_repeat 585 chrUn_NT_464178v1 28335 31191 (CGAGG)n 558 + 28335 31191 0 7 199,1020,74,179,681,178,200, 0,237,1440,1552,1755,2452,2656, +,+,+,+,+,+,+, 593707 Simple_repeat Simple_repeat 585 chrUn_NT_464178v1 31653 32856 (CGAGG)n 522 + 31653 32856 0 3 175,178,498, 0,349,705, +,+,+, 593711 Simple_repeat Simple_repeat 585 chrUn_NT_464178v1 33353 33667 (CGAGG)n 522 + 33353 33667 0 2 95,35, 0,279, +,+, 593716 Simple_repeat Simple_repeat 585 chrUn_NT_464178v1 36787 38011 (CGAGG)n 491 + 36787 38011 0 2 390,803, 0,421, +,+, 593728 Simple_repeat Simple_repeat 585 chrUn_NT_464178v1 39602 41782 (CGAGG)n 528 + 39602 41782 0 8 290,120,125,207,293,233,104,177, 0,320,615,774,1160,1473,1884,2003, +,+,+,+,+,+,+,+, 593733 Simple_repeat Simple_repeat 585 chrUn_NT_464178v1 42832 44560 (CGAGG)n 484 + 42832 44560 0 5 638,218,289,184,179, 0,813,1044,1348,1549, +,+,+,+,+, 593740 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 755 2589 (CAAGG)n 646 + 755 2589 0 5 429,369,168,64,195, 0,449,831,1177,1639, +,+,+,+,+, 593748 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 11460 13733 (CAGGC)n 507 + 11460 13733 0 6 205,17,190,255,144,240, 0,833,1202,1443,1709,2033, +,+,+,+,+,+, 593764 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 13971 14652 (CAGGC)n 685 + 13971 14652 0 4 25,101,116,71, 0,25,309,610, +,+,+,+, 593772 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 14598 14974 (CAAGG)n 691 + 14598 14974 0 2 177,199, 0,177, +,+, 593775 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 15657 16886 (CAAGG)n 636 + 15657 16886 0 6 178,205,140,51,203,246, 0,178,401,729,780,983, +,+,+,+,+,+, 593779 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 17097 18545 GGXHOI 399 + 17097 18545 0 2 850,555, 0,893, +,+, 593782 Satellite W-chromosome 585 chrUn_NT_464179v1 18550 19855 (CCTCG)n 640 + 18550 19855 0 2 134,837, 0,468, +,+, 593783 Simple_repeat Simple_repeat 585 chrUn_NT_464179v1 19918 20592 GGXHOI 354 + 19918 20592 0 2 218,414, 0,260, +,+, 593786 Satellite W-chromosome 585 chrUn_NT_464179v1 21251 23856 GGXHOI 417 + 21251 23856 0 5 605,686,610,418,144, 0,627,1376,2028,2461, +,+,+,+,+, 593789 Satellite W-chromosome 585 chrUn_NT_464179v1 23870 25887 GGXHOI 405 - 23870 25887 0 3 574,725,679, 0,591,1338, -,-,-, 593790 Satellite W-chromosome 585 chrUn_NT_464179v1 26468 27654 GGXHOI 385 - 26468 27654 0 2 476,694, 0,492, -,-, 593793 Satellite W-chromosome 585 chrUn_NT_464179v1 27718 28447 GGXHOI 384 - 27718 28447 0 2 409,279, 0,450, -,-, 593794 Satellite W-chromosome 585 chrUn_NT_464179v1 31475 33325 GGXHOI 414 - 31475 33325 0 2 480,1307, 0,543, -,-, 593800 Satellite W-chromosome 585 chrUn_NT_464179v1 33990 35977 GGXHOI 402 - 33990 35977 0 2 481,1443, 0,544, -,-, 593803 Satellite W-chromosome 585 chrUn_NT_464179v1 36513 38497 GGXHOI 403 - 36513 38497 0 2 479,1488, 0,496, -,-, 593806 Satellite W-chromosome 585 chrUn_NT_464179v1 39032 40918 GGXHOI 396 - 39032 40918 0 3 478,723,646, 0,495,1240, -,-,-, 593809 Satellite W-chromosome 585 chrUn_NT_464179v1 41534 42718 GGXHOI 414 - 41534 42718 0 2 478,689, 0,495, -,-, 593812 Satellite W-chromosome 585 chrUn_NT_464180v1 661 1315 (CCTCG)n 473 + 661 1315 0 3 192,184,177, 0,245,477, +,+,+, 593821 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 2903 5220 (CCTCG)n 499 + 2903 5220 0 6 862,190,304,177,183,447, 0,884,1114,1467,1669,1870, +,+,+,+,+,+, 593827 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 5251 6302 (CCTCG)n 530 + 5251 6302 0 3 184,320,512, 0,204,539, +,+,+, 593829 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 6591 7261 (CCTCG)n 525 + 6591 7261 0 2 437,183, 0,487, +,+, 593832 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 8983 9692 (CCTCG)n 554 + 8983 9692 0 2 474,180, 0,529, +,+, 593840 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 10099 11693 (CCTCG)n 536 + 10099 11693 0 5 309,214,66,261,193, 0,324,704,950,1401, +,+,+,+,+, 593843 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 12271 12669 (CCTCG)n 537 + 12271 12669 0 2 179,180, 0,218, +,+, 593850 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 13479 14217 (CCTCG)n 596 + 13479 14217 0 2 574,164, 0,574, +,+, 593851 Simple_repeat Simple_repeat 585 chrUn_NT_464180v1 14214 16628 GGERV10_LTR 797 + 14214 16628 0 2 41,38, 0,2376, +,+, 593852 LTR ERVL 585 chrUn_NT_464180v1 14256 16462 GGLTR10D-int 914 + 14256 16462 0 2 1839,364, 0,1842, +,+, 593853 LTR ERVK 585 chrUn_NT_464180v1 16640 19107 GGLTR7-int 592 - 16640 19107 0 2 792,338, 0,2129, -,-, 593854 LTR ERV1 585 chrUn_NT_464180v1 23195 23835 G-rich 453 + 23195 23835 0 2 38,555, 0,85, +,+, 593860 Low_complexity Low_complexity 585 chrUn_NT_464181v1 13482 15239 GGERVL-A-int 753 - 13482 15239 0 2 1300,457, 0,1300, -,-, 593883 LTR ERVL 585 chrUn_NT_464181v1 39964 42037 GGLTR7-int 666 + 39964 42037 0 3 339,184,111, 0,1580,1962, +,+,+, 593905 LTR ERV1 585 chrUn_NT_464181v1 42049 44234 GGERV10_LTR 848 - 42049 44234 0 2 38,41, 0,2144, -,-, 593908 LTR ERVL 585 chrUn_NT_464181v1 42214 44192 GGLTR10D-int 879 - 42214 44192 0 3 360,968,512, 0,363,1466, -,-,-, 593909 LTR ERVK 585 chrUn_NT_464181v1 44245 44918 (CGAGG)n 504 + 44245 44918 0 2 480,181, 0,492, +,+, 593910 Simple_repeat Simple_repeat 585 chrUn_NT_464182v1 20572 21298 GGXHOI 339 - 20572 21298 0 2 269,403, 0,323, -,-, 593937 Satellite W-chromosome 585 chrUn_NT_464182v1 21569 23111 GGXHOI 350 - 21569 23111 0 2 430,1056, 0,486, -,-, 593938 Satellite W-chromosome 585 chrUn_NT_464182v1 25435 28123 GGXHOI 379 - 25435 28123 0 3 1005,1085,472, 0,1068,2216, -,-,-, 593942 Satellite W-chromosome 585 chrUn_NT_464182v1 28222 29182 GGXHOI 375 - 28222 29182 0 2 513,384, 0,576, -,-, 593943 Satellite W-chromosome 585 chrUn_NT_464182v1 29871 30721 GGXHOI 369 - 29871 30721 0 2 560,273, 0,577, -,-, 593946 Satellite W-chromosome 585 chrUn_NT_464182v1 34179 35777 GGXHOI 362 - 34179 35777 0 2 1063,472, 0,1126, -,-, 593951 Satellite W-chromosome 585 chrUn_NT_464182v1 35876 36541 GGXHOI 292 - 35876 36541 0 2 410,241, 0,424, -,-, 593952 Satellite W-chromosome 585 chrUn_NT_464182v1 38193 40346 GGXHOI 364 - 38193 40346 0 2 1077,1013, 0,1140, -,-, 593956 Satellite W-chromosome 585 chrUn_NT_464182v1 42804 43715 GGXHOI 358 - 42804 43715 0 2 466,393, 0,518, -,-, 593960 Satellite W-chromosome 585 chrUn_NT_464182v1 43816 44684 GGXHOI 372 - 43816 44684 0 2 503,349, 0,519, -,-, 593961 Satellite W-chromosome 585 chrUn_NT_464183v1 1750 5020 GGXHOI 368 - 1750 5020 0 2 2502,721, 0,2549, -,-, 593963 Satellite W-chromosome 585 chrUn_NT_464183v1 5606 8868 GGXHOI 377 - 5606 8868 0 4 578,418,1392,809, 0,601,1037,2453, -,-,-,-, 593965 Satellite W-chromosome 585 chrUn_NT_464183v1 9019 9538 GGXHOI 307 - 9019 9538 0 2 217,262, 0,257, -,-, 593966 Satellite W-chromosome 585 chrUn_NT_464183v1 9630 13948 GGXHOI 367 - 9630 13948 0 5 1333,200,518,843,1261, 0,1390,1601,2160,3057, -,-,-,-,-, 593967 Satellite W-chromosome 585 chrUn_NT_464183v1 14703 17238 GGXHOI 378 - 14703 17238 0 5 627,695,170,680,271, 0,650,1373,1561,2264, -,-,-,-,-, 593970 Satellite W-chromosome 585 chrUn_NT_464183v1 18372 25572 GGXHOI 366 - 18372 25572 0 9 276,1770,555,1045,1605,367,148,383,771, 0,333,2166,2754,3841,5463,5848,6032,6429, -,-,-,-,-,-,-,-,-, 593973 Satellite W-chromosome 585 chrUn_NT_464183v1 25685 30470 GGXHOI 419 - 25685 30470 0 6 306,794,1195,728,1375,301, 0,322,1138,2351,3091,4484, -,-,-,-,-,-, 593974 Satellite W-chromosome 585 chrUn_NT_464183v1 30632 31818 GGXHOI 361 - 30632 31818 0 2 929,208, 0,978, -,-, 593975 Satellite W-chromosome 585 chrUn_NT_464183v1 32625 35015 GGXHOI 382 - 32625 35015 0 2 609,1757, 0,633, -,-, 593976 Satellite W-chromosome 585 chrUn_NT_464183v1 35452 38395 GGXHOI 360 - 35452 38395 0 5 143,305,1308,810,260, 0,169,509,1839,2683, -,-,-,-,-, 593977 Satellite W-chromosome 585 chrUn_NT_464183v1 39537 40947 GGXHOI 344 - 39537 40947 0 2 497,852, 0,558, -,-, 593979 Satellite W-chromosome 585 chrUn_NT_464183v1 40972 43824 GGXHOI 376 + 40972 43824 0 3 571,1619,629, 0,588,2223, +,+,+, 593980 Satellite W-chromosome 585 chrUn_NT_464184v1 865 2209 GGLTR3C2 389 - 865 2209 0 3 415,106,186, 0,517,1158, -,-,-, 593983 LTR ERVL 585 chrUn_NT_464184v1 2786 4313 CR1-C2 848 + 2786 4313 0 2 364,223, 0,1304, +,+, 593989 LINE CR1 585 chrUn_NT_464184v1 6409 11486 GGERVL-A-int 757 - 6409 11486 0 3 2897,1653,527, 0,2897,4550, -,-,-, 593996 LTR ERVL 585 chrUn_NT_464184v1 21153 25478 ENS1-int 602 - 21153 25478 0 4 488,1246,306,281, 0,1889,3736,4044, -,-,-,-, 594011 LTR ERVL 585 chrUn_NT_464184v1 25477 26510 GGERVL-B-int 356 + 25477 26510 0 4 737,89,101,106, 0,737,826,927, +,+,+,+, 594014 LTR ERVL 585 chrUn_NT_464184v1 33046 35990 CR1-F 554 - 33046 35990 0 2 1775,160, 0,2784, -,-, 594019 LINE CR1 585 chrUn_NT_464184v1 36330 39332 Char12Mar1_GG 629 - 36330 39332 0 3 336,680,380, 0,1431,2622, -,-,-, 594022 DNA hAT-Charlie 585 chrUn_NT_464184v1 36664 37767 CR1-D 788 - 36664 37767 0 2 328,430, 0,673, -,-, 594023 LINE CR1 585 chrUn_NT_464184v1 40847 44358 GGERV28_I-int 137 + 40847 44358 0 3 786,375,1756, 0,1068,1755, +,+,+, 594026 LTR ERVK 585 chrUn_NT_464185v1 16017 18479 GGLTR7-int 576 + 16017 18479 0 3 336,842,810, 0,801,1652, +,+,+, 594044 LTR ERV1 585 chrUn_NT_464185v1 18489 20740 GGERV10_LTR 905 - 18489 20740 0 2 42,35, 0,2216, -,-, 594047 LTR ERVL 585 chrUn_NT_464185v1 18663 20704 GGLTR10D-int 889 - 18663 20704 0 3 370,645,874, 0,373,1167, -,-,-, 594048 LTR ERVK 585 chrUn_NT_464185v1 21170 21648 (CGAGG)n 526 + 21170 21648 0 2 170,129, 0,349, +,+, 594051 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 21742 23214 (CGAGG)n 516 + 21742 23214 0 3 119,258,718, 0,449,754, +,+,+, 594054 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 23529 26343 (CGAGG)n 533 + 23529 26343 0 3 696,789,1270, 0,726,1544, +,+,+, 594061 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 26422 27784 (CGAGG)n 517 + 26422 27784 0 3 395,407,369, 0,572,993, +,+,+, 594063 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 27878 29090 (CGAGG)n 499 + 27878 29090 0 4 230,155,95,218, 0,516,715,994, +,+,+,+, 594066 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 29342 30745 (CGAGG)n 541 + 29342 30745 0 3 359,249,772, 0,359,631, +,+,+, 594072 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 32746 33324 (CGAGG)n 499 + 32746 33324 0 2 182,369, 0,209, +,+, 594077 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 33840 34626 (CGAGG)n 542 + 33840 34626 0 2 391,363, 0,423, +,+, 594081 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 35511 36760 (CGAGG)n 507 + 35511 36760 0 3 409,301,471, 0,440,778, +,+,+, 594086 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 40236 40767 (CGAGG)n 522 + 40236 40767 0 2 335,173, 0,358, +,+, 594097 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 42135 42751 (CGAGG)n 475 + 42135 42751 0 3 181,179,182, 0,196,434, +,+,+, 594104 Simple_repeat Simple_repeat 585 chrUn_NT_464185v1 43565 44122 (CGAGG)n 469 + 43565 44122 0 2 350,186, 0,371, +,+, 594108 Simple_repeat Simple_repeat 585 chrUn_NT_464186v1 8256 8306 (GCCCC)n 604 + 8256 8306 0 2 6,10, 0,40, +,+, 594135 Simple_repeat Simple_repeat 585 chrUn_NT_464186v1 12324 12390 (TCCTGC)n 378 + 12324 12390 0 2 23,17, 0,49, +,+, 594144 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 7541 9289 GGERVL-A-int 721 + 7541 9289 0 2 457,1291, 0,457, +,+, 594209 LTR ERVL 585 chrUn_NT_464187v1 28093 30540 GGLTR7-int 578 + 28093 30540 0 2 332,794, 0,1653, +,+, 594226 LTR ERV1 585 chrUn_NT_464187v1 28309 29743 Z-REP 441 - 28309 29743 0 2 130,858, 0,576, -,-, 594227 Satellite macro 585 chrUn_NT_464187v1 30722 32927 GGLTR10D-int 925 - 30722 32927 0 2 364,1838, 0,367, -,-, 594229 LTR ERVK 585 chrUn_NT_464187v1 33218 34690 (CGAGG)n 557 + 33218 34690 0 5 197,179,143,62,637, 0,241,433,761,835, +,+,+,+,+, 594233 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 35745 36127 (CGAGG)n 524 + 35745 36127 0 2 186,182, 0,200, +,+, 594243 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 36064 36426 (CGGGG)n 500 + 36064 36426 0 2 178,172, 0,190, +,+, 594244 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 36448 37224 (CGAGG)n 514 + 36448 37224 0 2 556,183, 0,593, +,+, 594245 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 39159 39908 (CGAGG)n 554 + 39159 39908 0 3 202,188,174, 0,374,575, +,+,+, 594256 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 40037 40566 (CGAGG)n 584 + 40037 40566 0 2 182,335, 0,194, +,+, 594259 Simple_repeat Simple_repeat 585 chrUn_NT_464187v1 41520 41975 (CGAGG)n 570 + 41520 41975 0 2 223,185, 0,270, +,+, 594264 Simple_repeat Simple_repeat 585 chrUn_NT_464188v1 406 834 (CTCTATGGGG)n 443 + 406 834 0 3 121,119,110, 0,149,318, +,+,+, 594268 Satellite Satellite 585 chrUn_NT_464188v1 3915 4710 (GGATG)n 690 + 3915 4710 0 3 223,173,196, 0,412,599, +,+,+, 594272 Simple_repeat Simple_repeat 585 chrUn_NT_464188v1 12943 13078 G-rich 549 + 12943 13078 0 2 44,36, 0,99, +,+, 594291 Low_complexity Low_complexity 585 chrUn_NT_464188v1 32169 32766 (CACTG)n 429 + 32169 32766 0 3 114,348,91, 0,126,506, +,+,+, 594324 Simple_repeat Simple_repeat 585 chrUn_NT_464189v1 8642 11455 Char12Mar1_GG 439 - 8642 11455 0 2 905,251, 0,2562, -,-, 594345 DNA hAT-Charlie 585 chrUn_NT_464189v1 17373 22742 Char12Mar1_GG 403 - 17373 22742 0 2 880,245, 0,5124, -,-, 594353 DNA hAT-Charlie 585 chrUn_NT_464189v1 26966 30817 Char12Mar1_GG 479 - 26966 30817 0 3 628,315,254, 0,1631,3597, -,-,-, 594359 DNA hAT-Charlie 585 chrUn_NT_464189v1 35043 40409 Char12Mar1_GG 384 - 35043 40409 0 2 880,267, 0,5099, -,-, 594366 DNA hAT-Charlie 585 chrUn_NT_464190v1 26379 27359 CR1-Y2_Aves 209 + 26379 27359 0 2 146,270, 0,710, +,+, 594407 LINE CR1 585 chrUn_NT_464190v1 26615 27075 CR1-D2 430 + 26615 27075 0 2 222,203, 0,257, +,+, 594409 LINE CR1 585 chrUn_NT_464190v1 29796 31180 CR1-C4 568 - 29796 31180 0 2 680,682, 0,702, -,-, 594413 LINE CR1 585 chrUn_NT_464190v1 37724 39008 GGLTR8B 445 + 37724 39008 0 3 52,41,124, 0,895,1160, +,+,+, 594426 LTR ERVL 585 chrUn_NT_464191v1 2995 4077 GGXHOI 354 - 2995 4077 0 2 655,365, 0,717, -,-, 594436 Satellite W-chromosome 585 chrUn_NT_464191v1 4114 5974 GGXHOI 394 - 4114 5974 0 2 1486,357, 0,1503, -,-, 594438 Satellite W-chromosome 585 chrUn_NT_464191v1 6789 7209 GGXHOI 294 - 6789 7209 0 2 157,217, 0,203, -,-, 594441 Satellite W-chromosome 585 chrUn_NT_464191v1 9170 11050 GGXHOI 365 - 9170 11050 0 2 187,1650, 0,230, -,-, 594448 Satellite W-chromosome 585 chrUn_NT_464191v1 11087 13028 GGXHOI 374 - 11087 13028 0 2 1267,658, 0,1283, -,-, 594450 Satellite W-chromosome 585 chrUn_NT_464191v1 29722 32367 GGXHOI 380 - 29722 32367 0 4 1008,110,1268,157, 0,1045,1192,2488, -,-,-,-, 594477 Satellite W-chromosome 585 chrUn_NT_464191v1 32457 34728 GGXHOI 402 - 32457 34728 0 2 1761,487, 0,1784, -,-, 594480 Satellite W-chromosome 585 chrUn_NT_464191v1 40877 41536 GGXHOI 345 - 40877 41536 0 2 381,258, 0,401, -,-, 594490 Satellite W-chromosome 585 chrUn_NT_464192v1 3886 4493 GGXHOI 339 + 3886 4493 0 2 423,123, 0,484, +,+, 594492 Satellite W-chromosome 585 chrUn_NT_464192v1 4802 5812 GGXHOI 384 + 4802 5812 0 2 808,182, 0,828, +,+, 594493 Satellite W-chromosome 585 chrUn_NT_464192v1 6755 7294 GGXHOI 452 + 6755 7294 0 2 336,161, 0,378, +,+, 594496 Satellite W-chromosome 585 chrUn_NT_464192v1 7742 8047 GGXHOI 362 + 7742 8047 0 2 118,134, 0,171, +,+, 594498 Satellite W-chromosome 585 chrUn_NT_464192v1 8138 9005 GGXHOI 414 + 8138 9005 0 2 303,521, 0,346, +,+, 594499 Satellite W-chromosome 585 chrUn_NT_464192v1 9098 10694 GGXHOI 345 + 9098 10694 0 3 131,694,728, 0,153,868, +,+,+, 594500 Satellite W-chromosome 585 chrUn_NT_464192v1 10767 12592 GGXHOI 331 + 10767 12592 0 4 283,171,1183,120, 0,310,499,1705, +,+,+,+, 594501 Satellite W-chromosome 585 chrUn_NT_464192v1 13522 40577 GGXHOI 406 + 13522 40577 0 25 674,625,4123,623,617,1055,1099,625,621,625,1513,625,619,625,617,625,2811,625,619,1283,1519,1268,1267,872,715, 0,699,1365,5513,6177,6819,7897,9021,9687,10333,10999,12537,13203,13847,14513,15155,15821,18657,19323,19967,21275,22834,24143,25451,26340, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 594503 Satellite W-chromosome 585 chrUn_NT_464193v1 34010 35193 CR1-Y1_Aves 308 + 34010 35193 0 2 31,945, 0,238, +,+, 594553 LINE CR1 585 chrUn_NT_464194v1 36162 36939 CR1-F 284 - 36162 36939 0 2 580,197, 0,580, -,-, 594591 LINE CR1 585 chrUn_NT_464195v1 13440 15196 GGERVL-A-int 749 - 13440 15196 0 2 1299,457, 0,1299, -,-, 594607 LTR ERVL 585 chrUn_NT_464196v1 38239 38379 GA-rich 314 + 38239 38379 0 2 43,42, 0,98, +,+, 594742 Low_complexity Low_complexity 585 chrUn_NT_464197v1 14730 20618 GGERVK10-int 517 - 14730 20618 0 4 2276,2480,143,387, 0,2835,5358,5501, -,-,-,-, 594773 LTR ERVK 585 chrUn_NT_464197v1 28430 31725 Char12Mar1_GG 540 - 28430 31725 0 2 52,174, 0,3121, -,-, 594786 DNA hAT-Charlie 585 chrUn_NT_464197v1 37161 38699 CR1-C4 387 - 37161 38699 0 2 194,218, 0,1320, -,-, 594800 LINE CR1 585 chrUn_NT_464197v1 37389 37953 GGLTR5B 516 + 37389 37953 0 2 442,87, 0,477, +,+, 594801 LTR ERVL 585 chrUn_NT_464198v1 5364 6046 GGLTR3D 512 - 5364 6046 0 2 335,299, 0,383, -,-, 594809 LTR ERVL 585 chrUn_NT_464198v1 12916 14065 CR1-F2 442 - 12916 14065 0 2 81,218, 0,931, -,-, 594816 LINE CR1 585 chrUn_NT_464198v1 14628 17918 GGLTR7-int 539 + 14628 17918 0 4 1887,244,80,561, 0,2404,2648,2729, +,+,+,+, 594820 LTR ERV1 585 chrUn_NT_464198v1 21659 22277 GGERVL-B-int 664 + 21659 22277 0 2 545,73, 0,545, +,+, 594828 LTR ERVL 585 chrUn_NT_464198v1 22328 24131 GGERVL18-int 854 + 22328 24131 0 2 68,1716, 0,87, +,+, 594829 LTR ERVL 585 chrUn_NT_464198v1 27147 28801 GGERVL18-LTR 700 - 27147 28801 0 2 1308,278, 0,1376, -,-, 594833 LTR ERVL 585 chrUn_NT_464199v1 10044 10334 (CCCCATTGGG)n 464 + 10044 10334 0 2 139,137, 0,153, +,+, 594853 Satellite Satellite 585 chrUn_NT_464200v1 3722 6392 GGXHOI 376 - 3722 6392 0 4 520,1093,478,391, 0,583,1739,2279, -,-,-,-, 594881 Satellite W-chromosome 585 chrUn_NT_464200v1 7066 8117 GGXHOI 376 - 7066 8117 0 2 516,472, 0,579, -,-, 594883 Satellite W-chromosome 585 chrUn_NT_464200v1 8216 9182 GGXHOI 381 - 8216 9182 0 2 516,387, 0,579, -,-, 594884 Satellite W-chromosome 585 chrUn_NT_464200v1 10995 12041 GGXHOI 387 - 10995 12041 0 2 512,475, 0,571, -,-, 594888 Satellite W-chromosome 585 chrUn_NT_464200v1 14081 14942 (CCTTG)n 495 + 14081 14942 0 3 227,373,193, 0,251,668, +,+,+, 594894 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 14969 15324 (CAGGC)n 305 + 14969 15324 0 2 252,40, 0,315, +,+, 594895 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 15324 15593 (CAAGG)n 654 + 15324 15593 0 2 46,223, 0,46, +,+, 594896 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 15792 16305 (CCTTG)n 565 + 15792 16305 0 3 85,26,208, 0,275,305, +,+,+, 594899 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 16421 16740 (GCCTG)n 400 + 16421 16740 0 2 98,40, 0,279, +,+, 594902 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 16763 17118 (CAGGC)n 309 + 16763 17118 0 2 265,40, 0,315, +,+, 594904 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 17118 17655 (CAAGG)n 592 + 17118 17655 0 3 46,223,251, 0,46,286, +,+,+, 594905 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 17731 18095 (CAAGG)n 428 + 17731 18095 0 2 75,262, 0,102, +,+, 594906 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 18198 18557 (CAAGG)n 496 + 18198 18557 0 2 184,156, 0,203, +,+, 594908 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 18610 18841 (CAAGG)n 464 + 18610 18841 0 2 24,183, 0,48, +,+, 594910 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 18983 19844 (CCTTG)n 484 + 18983 19844 0 3 227,373,193, 0,251,668, +,+,+, 594912 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 20412 21519 (CAAGG)n 488 + 20412 21519 0 4 372,369,125,25, 0,372,774,1082, +,+,+,+, 594915 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 21573 22606 (CCTTG)n 499 + 21573 22606 0 3 200,545,224, 0,236,809, +,+,+, 594917 Simple_repeat Simple_repeat 585 chrUn_NT_464200v1 31147 34398 GGXHOI 363 - 31147 34398 0 4 881,841,995,385, 0,916,1808,2866, -,-,-,-, 594928 Satellite W-chromosome 585 chrUn_NT_464200v1 34582 36202 GGXHOI 366 - 34582 36202 0 2 513,1045, 0,575, -,-, 594929 Satellite W-chromosome 585 chrUn_NT_464200v1 36869 38180 GGXHOI 348 - 36869 38180 0 2 282,991, 0,320, -,-, 594931 Satellite W-chromosome 585 chrUn_NT_464201v1 1114 2458 CR1-D 710 + 1114 2458 0 2 524,806, 0,538, +,+, 594935 LINE CR1 585 chrUn_NT_464201v1 25254 25905 CR1-X2 595 + 25254 25905 0 2 358,63, 0,588, +,+, 594959 LINE CR1 585 chrUn_NT_464201v1 38091 39214 Z-REP 550 - 38091 39214 0 2 289,749, 0,374, -,-, 594969 Satellite macro 585 chrUn_NT_464202v1 29521 32042 GGLTR7-int 326 - 29521 32042 0 3 328,345,98, 0,426,2423, -,-,-, 594989 LTR ERV1 585 chrUn_NT_464202v1 33954 35077 CR1-B2 693 - 33954 35077 0 2 896,224, 0,899, -,-, 594994 LINE CR1 585 chrUn_NT_464204v1 10345 10887 CR1-Y4 351 - 10345 10887 0 2 343,127, 0,415, -,-, 595022 LINE CR1 585 chrUn_NT_464204v1 34287 38417 GGXHOI 482 + 34287 38417 0 6 299,1017,865,265,160,1442, 0,315,1352,2233,2514,2688, +,+,+,+,+,+, 595064 Satellite W-chromosome 585 chrUn_NT_464205v1 9451 9522 (GCC)n 274 + 9451 9522 0 2 11,31, 0,40, +,+, 595077 Simple_repeat Simple_repeat 585 chrUn_NT_464205v1 19009 19256 (ACCCATTGGG)n 418 + 19009 19256 0 2 117,117, 0,130, +,+, 595103 Satellite Satellite 585 chrUn_NT_464206v1 716 1724 GGXHOI 403 + 716 1724 0 2 685,306, 0,702, +,+, 595119 Satellite W-chromosome 585 chrUn_NT_464206v1 2462 4626 GGXHOI 402 + 2462 4626 0 2 1480,661, 0,1503, +,+, 595121 Satellite W-chromosome 585 chrUn_NT_464206v1 5028 6468 GGXHOI 388 + 5028 6468 0 3 154,869,375, 0,176,1065, +,+,+, 595123 Satellite W-chromosome 585 chrUn_NT_464206v1 6921 9767 GGXHOI 380 + 6921 9767 0 4 785,477,914,613, 0,809,1302,2233, +,+,+,+, 595125 Satellite W-chromosome 585 chrUn_NT_464206v1 9895 12128 GGXHOI 390 + 9895 12128 0 6 372,228,555,632,231,126, 0,384,631,1203,1858,2107, +,+,+,+,+,+, 595126 Satellite W-chromosome 585 chrUn_NT_464206v1 12405 23452 GGXHOI 398 + 12405 23452 0 14 1278,395,229,545,1127,305,1331,721,1039,181,798,1113,1112,630, 0,1295,1702,1953,2510,3660,3987,5335,6068,7145,7338,8153,9288,10417, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 595127 Satellite W-chromosome 585 chrUn_NT_464206v1 23549 35436 GGXHOI 401 + 23549 35436 0 14 150,966,343,150,294,802,633,777,2162,1861,314,588,2318,308, 0,172,1155,1510,1682,1988,2806,3461,4256,6441,8314,8640,9244,11579, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 595128 Satellite W-chromosome 585 chrUn_NT_464206v1 36257 37577 GGXHOI 386 + 36257 37577 0 2 674,629, 0,691, +,+, 595130 Satellite W-chromosome 585 chrUn_NT_464208v1 2044 3313 GGLTR7A 817 + 2044 3313 0 2 684,585, 0,684, +,+, 595137 LTR ERV1 585 chrUn_NT_464208v1 3435 5324 GGLTR11 511 + 3435 5324 0 3 1331,46,474, 0,1331,1415, +,+,+, 595138 LTR ERV1 585 chrUn_NT_464208v1 5806 8540 GGERVK10-int 736 - 5806 8540 0 3 377,204,2153, 0,377,581, -,-,-, 595140 LTR ERVK 585 chrUn_NT_464208v1 8539 8759 GGLTR3F1 928 + 8539 8759 0 2 85,135, 0,85, +,+, 595141 LTR ERVL 585 chrUn_NT_464208v1 8759 11533 GGERVL-B-int 743 + 8759 11533 0 4 1495,782,232,212, 0,1495,2277,2562, +,+,+,+, 595142 LTR ERVL 585 chrUn_NT_464208v1 11892 15561 GGERVL18-int 815 - 11892 15561 0 3 1016,773,524, 0,2372,3145, -,-,-, 595145 LTR ERVL 585 chrUn_NT_464208v1 16387 19174 ENS1-int 894 + 16387 19174 0 2 974,1813, 0,974, +,+, 595149 LTR ERVL 585 chrUn_NT_464208v1 21506 26654 GGERVL-A-int 801 + 21506 26654 0 5 713,1777,1811,230,229, 0,1071,2848,4659,4919, +,+,+,+,+, 595151 LTR ERVL 585 chrUn_NT_464208v1 27659 29709 GGERVL18-int 644 + 27659 29709 0 3 246,63,603, 0,277,1447, +,+,+, 595155 LTR ERVL 585 chrUn_NT_464208v1 30032 33944 GGLTR11-int 666 + 30032 33944 0 3 1033,155,1240, 0,1603,2672, +,+,+, 595160 LTR ERV1 585 chrUn_NT_464208v1 34108 35515 GGLTR7-int 563 + 34108 35515 0 3 343,463,157, 0,345,1250, +,+,+, 595162 LTR ERV1 585 chrUn_NT_464208v1 35653 36542 GGLTR11-int 805 - 35653 36542 0 2 166,91, 0,798, -,-, 595163 LTR ERV1 585 chrUn_NT_464208v1 36543 37490 GGLTR7B 288 - 36543 37490 0 2 340,435, 0,512, -,-, 595165 LTR ERV1 585 chrUn_NT_464208v1 37491 38320 GGLTR7A 918 + 37491 38320 0 3 265,141,423, 0,265,406, +,+,+, 595166 LTR ERV1 585 chrUn_NT_464209v1 1490 2015 CR1-H2 563 - 1490 2015 0 3 393,64,43, 0,418,482, -,-,-, 595171 LINE CR1 585 chrUn_NT_464209v1 8805 9048 CR1-F2 516 - 8805 9048 0 3 72,76,75, 0,80,168, -,-,-, 595177 LINE CR1 585 chrUn_NT_464209v1 12302 13257 GGLTR11 493 + 12302 13257 0 2 59,333, 0,622, +,+, 595181 LTR ERV1 585 chrUn_NT_464209v1 30794 31157 CR1-F2 386 - 30794 31157 0 2 270,90, 0,273, -,-, 595197 LINE CR1 585 chrUn_NT_464209v1 32338 32866 (CACAG)n 348 + 32338 32866 0 2 130,40, 0,488, +,+, 595201 Simple_repeat Simple_repeat 585 chrUn_NT_464209v1 33296 33640 (CAATG)n 418 + 33296 33640 0 2 105,64, 0,280, +,+, 595207 Simple_repeat Simple_repeat 585 chrUn_NT_464210v1 15340 22367 Z-REP 829 - 15340 22367 0 2 1571,5436, 0,1591, -,-, 595226 Satellite macro 585 chrUn_NT_464210v1 23967 24228 CR1-X2 378 + 23967 24228 0 2 63,198, 0,63, +,+, 595228 LINE CR1 585 chrUn_NT_464211v1 1188 1530 (CGGGG)n 509 + 1188 1530 0 2 172,170, 0,172, +,+, 595240 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 5028 6156 (CAAGG)n 503 + 5028 6156 0 3 321,508,263, 0,345,865, +,+,+, 595258 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 6732 7109 (CAAGG)n 462 + 6732 7109 0 2 184,178, 0,199, +,+, 595262 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 7165 7925 (CCTTG)n 511 + 7165 7925 0 2 134,609, 0,151, +,+, 595263 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 8018 8346 (CAGGC)n 306 + 8018 8346 0 2 227,85, 0,243, +,+, 595265 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 8931 9872 (CCTTG)n 539 + 8931 9872 0 4 184,192,233,126, 0,184,403,815, +,+,+,+, 595270 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 10994 11821 (CAAGG)n 461 + 10994 11821 0 4 24,164,371,172, 0,47,269,655, +,+,+,+, 595277 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 11861 12665 (CCTTG)n 517 + 11861 12665 0 2 286,499, 0,305, +,+, 595278 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 13788 14616 (CAAGG)n 461 + 13788 14616 0 4 24,164,371,172, 0,48,270,656, +,+,+,+, 595285 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 14656 15460 (CCTTG)n 519 + 14656 15460 0 2 286,499, 0,305, +,+, 595286 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 16583 17411 (CAAGG)n 461 + 16583 17411 0 4 24,164,371,172, 0,48,270,656, +,+,+,+, 595293 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 17451 18255 (CCTTG)n 519 + 17451 18255 0 2 286,499, 0,305, +,+, 595294 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 19378 20206 (CAAGG)n 461 + 19378 20206 0 4 24,164,371,172, 0,48,270,656, +,+,+,+, 595301 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 20246 21050 (CCTTG)n 519 + 20246 21050 0 2 286,499, 0,305, +,+, 595302 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 21452 22036 (CAAGG)n 488 + 21452 22036 0 2 263,132, 0,452, +,+, 595306 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 22089 22917 (CAAGG)n 461 + 22089 22917 0 4 24,164,371,172, 0,48,270,656, +,+,+,+, 595309 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 22957 23761 (CCTTG)n 519 + 22957 23761 0 2 286,499, 0,305, +,+, 595310 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 24884 25711 (CAAGG)n 458 + 24884 25711 0 4 24,164,371,172, 0,48,269,655, +,+,+,+, 595317 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 25751 26381 (CCTTG)n 501 + 25751 26381 0 2 286,331, 0,299, +,+, 595318 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 26469 26797 (CAGGC)n 331 + 26469 26797 0 2 227,40, 0,288, +,+, 595320 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 26797 27066 (CAAGG)n 648 + 26797 27066 0 2 46,223, 0,46, +,+, 595321 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 27382 28009 (CCTTG)n 493 + 27382 28009 0 3 184,332,87, 0,184,540, +,+,+, 595325 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 28017 28335 (GCCTG)n 382 + 28017 28335 0 2 97,43, 0,275, +,+, 595326 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 28385 28713 (CAGGC)n 331 + 28385 28713 0 2 227,40, 0,288, +,+, 595328 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 28713 29132 (CAAGG)n 545 + 28713 29132 0 3 46,31,185, 0,190,234, +,+,+, 595329 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 29298 30209 (CCTTG)n 561 + 29298 30209 0 3 184,192,508, 0,184,403, +,+,+, 595332 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 30302 30630 (CAGGC)n 331 + 30302 30630 0 2 227,40, 0,288, +,+, 595334 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 30630 31099 (CAAGG)n 593 + 30630 31099 0 3 46,223,175, 0,46,294, +,+,+, 595335 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 31214 31842 (CCTTG)n 490 + 31214 31842 0 3 184,333,87, 0,184,541, +,+,+, 595337 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 31850 32168 (GCCTG)n 382 + 31850 32168 0 2 97,43, 0,275, +,+, 595338 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 32218 32546 (CAGGC)n 331 + 32218 32546 0 2 227,40, 0,288, +,+, 595340 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 32546 32815 (CAAGG)n 648 + 32546 32815 0 2 46,223, 0,46, +,+, 595341 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 33131 34042 (CCTTG)n 563 + 33131 34042 0 3 184,192,508, 0,184,403, +,+,+, 595345 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 34135 34462 (CAGGC)n 332 + 34135 34462 0 2 273,40, 0,287, +,+, 595347 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 35047 35744 (CCTTG)n 567 + 35047 35744 0 3 143,54,294, 0,322,403, +,+,+, 595352 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 36284 36733 (CAAGG)n 483 + 36284 36733 0 2 249,185, 0,264, +,+, 595357 Simple_repeat Simple_repeat 585 chrUn_NT_464211v1 36782 37526 (CCTTG)n 493 + 36782 37526 0 3 300,333,87, 0,300,657, +,+,+, 595358 Simple_repeat Simple_repeat 585 chrUn_NT_464212v1 18082 18213 G-rich 238 + 18082 18213 0 2 25,61, 0,70, +,+, 595398 Low_complexity Low_complexity 585 chrUn_NT_464212v1 21090 21233 GA-rich 292 + 21090 21233 0 2 43,67, 0,76, +,+, 595402 Low_complexity Low_complexity 585 chrUn_NT_464212v1 24073 24216 GA-rich 292 + 24073 24216 0 2 42,67, 0,76, +,+, 595406 Low_complexity Low_complexity 585 chrUn_NT_464212v1 25553 25693 GA-rich 272 + 25553 25693 0 2 42,65, 0,75, +,+, 595408 Low_complexity Low_complexity 585 chrUn_NT_464212v1 27107 27247 GA-rich 260 + 27107 27247 0 2 43,63, 0,77, +,+, 595412 Low_complexity Low_complexity 585 chrUn_NT_464212v1 28662 28803 GA-rich 268 + 28662 28803 0 2 43,65, 0,76, +,+, 595415 Low_complexity Low_complexity 585 chrUn_NT_464212v1 31516 31646 GA-rich 366 + 31516 31646 0 2 43,33, 0,97, +,+, 595419 Low_complexity Low_complexity 585 chrUn_NT_464212v1 33080 33224 GA-rich 274 + 33080 33224 0 2 43,44, 0,100, +,+, 595422 Low_complexity Low_complexity 585 chrUn_NT_464212v1 33790 34020 G-rich 266 + 33790 34020 0 2 32,41, 0,189, +,+, 595424 Low_complexity Low_complexity 585 chrUn_NT_464212v1 34638 34776 GA-rich 222 + 34638 34776 0 2 43,63, 0,75, +,+, 595426 Low_complexity Low_complexity 585 chrUn_NT_464213v1 480 1527 GGXHOI 362 - 480 1527 0 2 513,471, 0,576, -,-, 595435 Satellite W-chromosome 585 chrUn_NT_464213v1 2383 3938 GGXHOI 357 - 2383 3938 0 3 669,339,468, 0,731,1087, -,-,-, 595437 Satellite W-chromosome 585 chrUn_NT_464213v1 4208 5165 GGXHOI 364 - 4208 5165 0 2 686,209, 0,748, -,-, 595438 Satellite W-chromosome 585 chrUn_NT_464213v1 8249 10167 GGXHOI 380 - 8249 10167 0 2 1007,849, 0,1069, -,-, 595443 Satellite W-chromosome 585 chrUn_NT_464213v1 12097 13383 GGXHOI 374 - 12097 13383 0 2 751,472, 0,814, -,-, 595446 Satellite W-chromosome 585 chrUn_NT_464213v1 17489 18272 GGXHOI 360 - 17489 18272 0 2 174,594, 0,189, -,-, 595454 Satellite W-chromosome 585 chrUn_NT_464213v1 18415 19150 GGXHOI 343 - 18415 19150 0 2 170,554, 0,181, -,-, 595455 Satellite W-chromosome 585 chrUn_NT_464213v1 21677 22870 GGXHOI 347 - 21677 22870 0 2 180,965, 0,228, -,-, 595460 Satellite W-chromosome 585 chrUn_NT_464213v1 24648 25526 GGXHOI 347 - 24648 25526 0 2 517,300, 0,578, -,-, 595464 Satellite W-chromosome 585 chrUn_NT_464213v1 26565 27287 GGXHOI 363 - 26565 27287 0 2 190,474, 0,248, -,-, 595466 Satellite W-chromosome 585 chrUn_NT_464213v1 30854 32952 GGXHOI 381 - 30854 32952 0 2 1006,1030, 0,1068, -,-, 595471 Satellite W-chromosome 585 chrUn_NT_464214v1 10219 11623 GGLTR7-int 309 - 10219 11623 0 3 277,318,101, 0,983,1303, -,-,-, 595486 LTR ERV1 585 chrUn_NT_464214v1 12360 15099 GGERVL-B-int 692 - 12360 15099 0 2 917,1822, 0,917, -,-, 595489 LTR ERVL 585 chrUn_NT_464214v1 16930 17311 (CAAGG)n 490 + 16930 17311 0 2 142,46, 0,335, +,+, 595493 Simple_repeat Simple_repeat 585 chrUn_NT_464214v1 17293 17592 (CAGGC)n 550 + 17293 17592 0 2 148,10, 0,289, +,+, 595495 Simple_repeat Simple_repeat 585 chrUn_NT_464214v1 18901 20098 (CAAGG)n 559 + 18901 20098 0 4 182,206,207,75, 0,182,447,1122, +,+,+,+, 595505 Simple_repeat Simple_repeat 585 chrUn_NT_464214v1 21518 22021 (TCCT)n 406 + 21518 22021 0 2 27,6, 0,497, +,+, 595508 Simple_repeat Simple_repeat 585 chrUn_NT_464214v1 32727 34124 GGLTR7-int 302 - 32727 34124 0 3 279,312,106, 0,977,1291, -,-,-, 595518 LTR ERV1 585 chrUn_NT_464214v1 34844 37616 GGERVL-B-int 708 - 34844 37616 0 2 914,1858, 0,914, -,-, 595521 LTR ERVL 585 chrUn_NT_464215v1 6064 6877 CR1-H2 254 - 6064 6877 0 2 99,458, 0,355, -,-, 595524 LINE CR1 585 chrUn_NT_464215v1 35412 35470 G-rich 468 + 35412 35470 0 2 12,21, 0,37, +,+, 595539 Low_complexity Low_complexity 585 chrUn_NT_464216v1 19247 20222 CR1-Y2_Aves 297 - 19247 20222 0 2 597,377, 0,598, -,-, 595555 LINE CR1 585 chrUn_NT_464216v1 30875 32685 CR1-Y2_Aves 283 + 30875 32685 0 3 335,567,528, 0,336,1282, +,+,+, 595557 LINE CR1 585 chrUn_NT_464217v1 877 1510 GGXHOI 329 + 877 1510 0 2 350,226, 0,407, +,+, 595563 Satellite W-chromosome 585 chrUn_NT_464217v1 1794 5766 GGXHOI 379 - 1794 5766 0 8 482,332,167,515,589,255,1053,397, 0,497,870,1057,1628,2231,2510,3575, -,-,-,-,-,-,-,-, 595564 Satellite W-chromosome 585 chrUn_NT_464217v1 5871 9797 GGXHOI 394 - 5871 9797 0 6 486,1039,755,242,315,936, 0,527,1586,2364,2619,2990, -,-,-,-,-,-, 595565 Satellite W-chromosome 585 chrUn_NT_464217v1 10004 19775 GGXHOI 408 - 10004 19775 0 15 193,573,1057,434,1006,411,869,146,932,64,976,519,936,962,405, 0,220,813,1883,2337,3359,3808,4724,4885,5833,5912,6901,7435,8384,9366, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 595566 Satellite W-chromosome 585 chrUn_NT_464217v1 19898 27345 GGXHOI 406 - 19898 27345 0 7 551,958,1424,1513,582,1308,963, 0,566,1544,2988,4523,5156,6484, -,-,-,-,-,-,-, 595567 Satellite W-chromosome 585 chrUn_NT_464217v1 27441 33729 GGXHOI 416 - 27441 33729 0 7 819,1412,64,935,1965,384,573, 0,832,2264,2343,3329,5314,5715, -,-,-,-,-,-,-, 595568 Satellite W-chromosome 585 chrUn_NT_464217v1 33911 37219 GGXHOI 407 - 33911 37219 0 2 2044,1249, 0,2059, -,-, 595569 Satellite W-chromosome 585 chrUn_NT_464218v1 4116 21502 GGXHOI 430 - 4116 21502 0 12 1843,519,1226,1383,1257,1222,1425,2909,1888,1001,1224,1250, 0,1859,2435,3682,5086,6359,7602,9048,11974,13877,14896,16136, -,-,-,-,-,-,-,-,-,-,-,-, 595571 Satellite W-chromosome 585 chrUn_NT_464218v1 21663 25044 GGXHOI 404 - 21663 25044 0 6 166,357,857,707,504,639, 0,204,574,1451,2210,2742, -,-,-,-,-,-, 595572 Satellite W-chromosome 585 chrUn_NT_464218v1 25221 33716 GGXHOI 411 - 25221 33716 0 3 5877,1253,1318, 0,5897,7177, -,-,-, 595573 Satellite W-chromosome 585 chrUn_NT_464218v1 33907 37217 GGXHOI 397 - 33907 37217 0 2 2062,1218, 0,2092, -,-, 595574 Satellite W-chromosome 585 chrUn_NT_464219v1 568 709 CR1-Y2 590 + 568 709 0 2 61,80, 0,61, +,+, 595578 LINE CR1 585 chrUn_NT_464219v1 5679 6044 CR1-Y4 532 + 5679 6044 0 2 223,140, 0,225, +,+, 595584 LINE CR1 585 chrUn_NT_464219v1 15071 15975 CR1-H2 609 - 15071 15975 0 2 55,73, 0,831, -,-, 595603 LINE CR1 585 chrUn_NT_464219v1 19864 20100 CR1-F2 457 - 19864 20100 0 3 72,72,69, 0,82,167, -,-,-, 595614 LINE CR1 585 chrUn_NT_464219v1 20839 21337 CR1-B2 546 - 20839 21337 0 2 66,84, 0,414, -,-, 595617 LINE CR1 585 chrUn_NT_464220v1 2773 35339 GGXHOI 449 - 2773 35339 0 56 342,589,531,274,147,147,489,524,562,272,318,146,1604,153,1368,565,314,440,155,1476,396,815,358,1264,236,146,1739,819,1090,765,645,155,610,322,562,358,440,314,696,1684,155,145,729,185,699,1399,438,257,516,561,397,146,527,241,140,1143, 0,371,977,1519,1810,1975,2138,2640,3176,3755,4045,4420,4626,6247,6411,7790,8373,8702,9159,9325,10819,11233,12066,12436,13718,13965,14129,15879,16709,17829,18605,19267,19436,20058,20392,20971,21344,21839,22170,22916,24617,24786,24949,25689,25893,26604,28021,28477,28786,29325,29897,30308,30471,31009,31265,31423, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 595629 Satellite W-chromosome 585 chrUn_NT_464220v1 35816 37010 GGXHOI 404 - 35816 37010 0 2 648,531, 0,663, -,-, 595631 Satellite W-chromosome 585 chrUn_NT_464221v1 336 1880 GGXHOI 379 - 336 1880 0 2 1009,472, 0,1072, -,-, 595633 Satellite W-chromosome 585 chrUn_NT_464221v1 2557 4703 GGXHOI 379 - 2557 4703 0 2 1040,1045, 0,1101, -,-, 595635 Satellite W-chromosome 585 chrUn_NT_464221v1 6435 8052 GGXHOI 383 - 6435 8052 0 2 512,1042, 0,575, -,-, 595638 Satellite W-chromosome 585 chrUn_NT_464221v1 9302 12030 GGXHOI 381 - 9302 12030 0 3 1045,1085,472, 0,1108,2256, -,-,-, 595640 Satellite W-chromosome 585 chrUn_NT_464221v1 12129 13180 GGXHOI 378 - 12129 13180 0 2 516,472, 0,579, -,-, 595641 Satellite W-chromosome 585 chrUn_NT_464221v1 14387 15438 GGXHOI 378 - 14387 15438 0 2 516,472, 0,579, -,-, 595644 Satellite W-chromosome 585 chrUn_NT_464221v1 15537 16586 GGXHOI 378 - 15537 16586 0 2 515,471, 0,578, -,-, 595645 Satellite W-chromosome 585 chrUn_NT_464221v1 16685 17732 GGXHOI 379 - 16685 17732 0 2 514,471, 0,576, -,-, 595646 Satellite W-chromosome 585 chrUn_NT_464221v1 20071 20948 GGXHOI 317 - 20071 20948 0 3 278,259,218, 0,340,659, -,-,-, 595651 Satellite W-chromosome 585 chrUn_NT_464221v1 23450 24255 GGXHOI 330 - 23450 24255 0 2 342,419, 0,386, -,-, 595656 Satellite W-chromosome 585 chrUn_NT_464221v1 26257 28251 GGXHOI 326 - 26257 28251 0 2 1079,854, 0,1140, -,-, 595659 Satellite W-chromosome 585 chrUn_NT_464221v1 28674 29710 GGXHOI 364 - 28674 29710 0 2 510,470, 0,566, -,-, 595661 Satellite W-chromosome 585 chrUn_NT_464221v1 31779 32689 GGXHOI 377 - 31779 32689 0 2 474,385, 0,525, -,-, 595666 Satellite W-chromosome 585 chrUn_NT_464222v1 25867 32233 CR1-Y2_Aves 342 + 25867 32233 0 4 94,298,572,584, 0,1908,2207,5782, +,+,+,+, 595684 LINE CR1 585 chrUn_NT_464222v1 29022 31461 CR1-C3 475 + 29022 31461 0 2 528,1207, 0,1232, +,+, 595686 LINE CR1 585 chrUn_NT_464223v1 830 14358 GGERVL-A-int 804 + 830 14358 0 2 232,566, 0,12962, +,+, 595691 LTR ERVL 585 chrUn_NT_464223v1 1075 9233 GGLTR7-int 815 + 1075 9233 0 3 1279,937,105, 0,1290,8053, +,+,+, 595692 LTR ERV1 585 chrUn_NT_464223v1 3302 9128 GGERV10_LTR 949 + 3302 9128 0 3 220,5385,220, 0,221,5606, +,+,+, 595693 LTR ERVL 585 chrUn_NT_464223v1 9233 10327 GGERVL-A-int 887 - 9233 10327 0 2 483,611, 0,483, -,-, 595694 LTR ERVL 585 chrUn_NT_464223v1 10327 13803 GGLTR3F1 813 + 10327 13803 0 3 222,80,2995, 0,399,481, +,+,+, 595695 LTR ERVL 585 chrUn_NT_464223v1 14687 16452 GGERV10_LTR 737 - 14687 16452 0 3 1445,153,80, 0,1446,1685, -,-,-, 595699 LTR ERVL 585 chrUn_NT_464223v1 17735 18946 GGERVL18-int 700 + 17735 18946 0 2 343,868, 0,343, +,+, 595702 LTR ERVL 585 chrUn_NT_464223v1 19520 20856 GGERVL18-int 328 - 19520 20856 0 2 850,166, 0,1170, -,-, 595704 LTR ERVL 585 chrUn_NT_464223v1 21543 25831 GGERVL18-int 747 - 21543 25831 0 5 292,590,1168,47,1787, 0,292,1258,2429,2501, -,-,-,-,-, 595707 LTR ERVL 585 chrUn_NT_464223v1 26669 27901 GGLTR7-int 332 - 26669 27901 0 3 126,281,235, 0,550,997, -,-,-, 595712 LTR ERV1 585 chrUn_NT_464223v1 28039 32709 GGERVL-B-int 769 + 28039 32709 0 3 492,564,3612, 0,494,1058, +,+,+, 595713 LTR ERVL 585 chrUn_NT_464223v1 32709 33207 GGLTR3F1 787 + 32709 33207 0 2 36,462, 0,36, +,+, 595714 LTR ERVL 585 chrUn_NT_464223v1 33207 34067 GGERVL-C-int 619 + 33207 34067 0 2 754,106, 0,754, +,+, 595715 LTR ERVL 585 chrUn_NT_464223v1 34165 36806 GGERV10_LTR 823 - 34165 36806 0 3 157,61,2320, 0,260,321, -,-,-, 595716 LTR ERVL 585 chrUn_NT_464224v1 747 3382 GGXHOI 544 - 747 3382 0 3 457,392,742, 0,1020,1893, -,-,-, 595719 Satellite W-chromosome 585 chrUn_NT_464224v1 3398 7635 GGXHOI 564 - 3398 7635 0 5 51,104,529,386,631, 0,955,1558,2595,3606, -,-,-,-,-, 595723 Satellite W-chromosome 585 chrUn_NT_464224v1 10544 15913 GGXHOI 554 - 10544 15913 0 2 2354,1483, 0,3886, -,-, 595731 Satellite W-chromosome 585 chrUn_NT_464224v1 15953 17545 GGXHOI 560 - 15953 17545 0 2 1094,27, 0,1565, -,-, 595734 Satellite W-chromosome 585 chrUn_NT_464224v1 17622 29762 GGXHOI 562 - 17622 29762 0 9 209,369,380,315,123,60,435,209,2381, 0,1142,2025,3967,5778,6397,6987,8969,9759, -,-,-,-,-,-,-,-,-, 595736 Satellite W-chromosome 585 chrUn_NT_464224v1 29805 32328 GGXHOI 566 - 29805 32328 0 2 282,616, 0,1907, -,-, 595746 Satellite W-chromosome 585 chrUn_NT_464224v1 33316 36715 GGXHOI 548 - 33316 36715 0 4 242,324,96,784, 0,988,1590,2615, -,-,-,-, 595751 Satellite W-chromosome 585 chrUn_NT_464225v1 26994 27138 GA-rich 320 + 26994 27138 0 2 43,67, 0,77, +,+, 595794 Low_complexity Low_complexity 585 chrUn_NT_464225v1 28511 28656 GA-rich 300 + 28511 28656 0 2 43,45, 0,100, +,+, 595798 Low_complexity Low_complexity 585 chrUn_NT_464225v1 36173 36316 GA-rich 266 + 36173 36316 0 2 43,67, 0,76, +,+, 595807 Low_complexity Low_complexity 585 chrUn_NT_464227v1 1282 3775 GGXHOI 400 + 1282 3775 0 5 249,554,153,1144,311, 0,266,847,1016,2182, +,+,+,+,+, 595833 Satellite W-chromosome 585 chrUn_NT_464227v1 8607 11949 GGXHOI 411 + 8607 11949 0 2 3011,309, 0,3033, +,+, 595837 Satellite W-chromosome 585 chrUn_NT_464227v1 12859 15964 GGXHOI 427 + 12859 15964 0 3 887,2027,148, 0,910,2957, +,+,+, 595839 Satellite W-chromosome 585 chrUn_NT_464227v1 16912 18561 GGXHOI 414 + 16912 18561 0 2 1307,316, 0,1333, +,+, 595841 Satellite W-chromosome 585 chrUn_NT_464227v1 19498 21152 GGXHOI 453 + 19498 21152 0 2 1486,149, 0,1505, +,+, 595843 Satellite W-chromosome 585 chrUn_NT_464227v1 22098 23733 GGXHOI 421 + 22098 23733 0 4 1024,239,143,147, 0,1065,1326,1488, +,+,+,+, 595845 Satellite W-chromosome 585 chrUn_NT_464227v1 24676 26821 GGXHOI 417 + 24676 26821 0 2 1344,770, 0,1375, +,+, 595847 Satellite W-chromosome 585 chrUn_NT_464227v1 27733 29124 GGXHOI 380 + 27733 29124 0 2 484,866, 0,525, +,+, 595849 Satellite W-chromosome 585 chrUn_NT_464227v1 29445 29919 GGXHOI 437 + 29445 29919 0 2 305,149, 0,325, +,+, 595851 Satellite W-chromosome 585 chrUn_NT_464228v1 2902 3373 GGXHOI 409 - 2902 3373 0 2 253,174, 0,297, -,-, 595862 Satellite W-chromosome 585 chrUn_NT_464228v1 4105 5349 GGXHOI 394 - 4105 5349 0 3 557,148,503, 0,573,741, -,-,-, 595865 Satellite W-chromosome 585 chrUn_NT_464228v1 8112 9990 GGXHOI 366 - 8112 9990 0 4 484,192,154,948, 0,538,757,930, -,-,-,-, 595871 Satellite W-chromosome 585 chrUn_NT_464228v1 10080 13275 GGXHOI 358 - 10080 13275 0 5 561,393,240,514,676, 0,583,996,1987,2519, -,-,-,-,-, 595872 Satellite W-chromosome 585 chrUn_NT_464228v1 13349 13901 GGXHOI 375 - 13349 13901 0 2 198,338, 0,214, -,-, 595876 Satellite W-chromosome 585 chrUn_NT_464228v1 14033 15942 GGXHOI 412 - 14033 15942 0 4 808,411,413,212, 0,828,1268,1697, -,-,-,-, 595877 Satellite W-chromosome 585 chrUn_NT_464228v1 16030 18014 GGXHOI 394 - 16030 18014 0 3 941,266,719, 0,961,1265, -,-,-, 595879 Satellite W-chromosome 585 chrUn_NT_464228v1 19986 23656 GGXHOI 360 - 19986 23656 0 6 661,471,636,764,692,282, 0,686,1203,1883,2668,3388, -,-,-,-,-,-, 595884 Satellite W-chromosome 585 chrUn_NT_464228v1 23753 24959 GGXHOI 343 - 23753 24959 0 2 473,674, 0,532, -,-, 595886 Satellite W-chromosome 585 chrUn_NT_464228v1 25917 27386 GGXHOI 357 - 25917 27386 0 3 364,436,614, 0,387,855, -,-,-, 595888 Satellite W-chromosome 585 chrUn_NT_464228v1 27474 30205 GGXHOI 366 - 27474 30205 0 6 722,480,234,724,210,223, 0,745,1255,1541,2287,2508, -,-,-,-,-,-, 595890 Satellite W-chromosome 585 chrUn_NT_464228v1 30960 32155 GGXHOI 388 - 30960 32155 0 2 730,443, 0,752, -,-, 595894 Satellite W-chromosome 585 chrUn_NT_464228v1 34803 35985 GGXHOI 364 - 34803 35985 0 2 721,438, 0,744, -,-, 595900 Satellite W-chromosome 585 chrUn_NT_464229v1 679 4554 Sat-CR1_GG 160 - 679 4554 0 3 2307,43,117, 0,3053,3758, -,-,-, 595905 Satellite Satellite 585 chrUn_NT_464229v1 11077 12068 GGXHOI 564 - 11077 12068 0 2 211,208, 0,783, -,-, 595914 Satellite W-chromosome 585 chrUn_NT_464229v1 12452 23599 GGXHOI 553 - 12452 23599 0 11 187,23,479,267,210,248,208,22,233,330,939, 0,675,745,1788,3420,4310,7023,7782,8722,9249,10208, -,-,-,-,-,-,-,-,-,-,-, 595917 Satellite W-chromosome 585 chrUn_NT_464229v1 23642 26686 GGXHOI 560 - 23642 26686 0 2 1273,371, 0,2673, -,-, 595928 Satellite W-chromosome 585 chrUn_NT_464229v1 28032 32109 GGXHOI 558 - 28032 32109 0 2 279,709, 0,3368, -,-, 595931 Satellite W-chromosome 585 chrUn_NT_464229v1 32187 36413 GGXHOI 587 - 32187 36413 0 4 162,279,225,19, 0,205,1919,4207, -,-,-,-, 595934 Satellite W-chromosome 585 chrUn_NT_464230v1 9445 9588 GA-rich 296 + 9445 9588 0 2 43,66, 0,77, +,+, 595958 Low_complexity Low_complexity 585 chrUn_NT_464230v1 31917 32060 GA-rich 270 + 31917 32060 0 2 43,50, 0,93, +,+, 595991 Low_complexity Low_complexity 585 chrUn_NT_464230v1 34880 35011 GA-rich 314 + 34880 35011 0 2 43,33, 0,98, +,+, 595996 Low_complexity Low_complexity 585 chrUn_NT_464231v1 808 3304 GGERVL-B-int 653 + 808 3304 0 4 287,53,1065,729, 0,641,702,1767, +,+,+,+, 596003 LTR ERVL 585 chrUn_NT_464231v1 3297 4677 GGLTR7-int 323 + 3297 4677 0 3 69,315,287, 0,71,1093, +,+,+, 596004 LTR ERV1 585 chrUn_NT_464231v1 14966 15874 CR1-F0 852 - 14966 15874 0 2 144,764, 0,144, -,-, 596017 LINE CR1 585 chrUn_NT_464231v1 15875 16581 (CCTTG)n 608 + 15875 16581 0 2 197,30, 0,676, +,+, 596018 Simple_repeat Simple_repeat 585 chrUn_NT_464231v1 21137 23758 GGERVL-B-int 727 + 21137 23758 0 4 209,64,1074,913, 0,569,634,1708, +,+,+,+, 596044 LTR ERVL 585 chrUn_NT_464231v1 24500 25902 GGLTR7-int 315 + 24500 25902 0 3 102,261,279, 0,104,1123, +,+,+, 596046 LTR ERV1 585 chrUn_NT_464232v1 1124 19663 GGXHOI 424 + 1124 19663 0 21 1377,1005,669,1876,682,599,972,599,961,1043,1003,1698,425,273,353,1472,714,648,722,309,757, 0,1400,2426,3111,5008,5708,6328,7318,7938,8922,9988,11012,12727,13168,13462,13830,15314,16044,16707,17452,17782, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 596059 Satellite W-chromosome 585 chrUn_NT_464232v1 19762 24927 GGXHOI 414 + 19762 24927 0 5 1375,1668,649,1047,351, 0,1398,3082,3746,4814, +,+,+,+,+, 596060 Satellite W-chromosome 585 chrUn_NT_464232v1 25338 31879 GGXHOI 409 + 25338 31879 0 7 304,771,796,1153,346,625,2372, 0,360,1154,1962,3136,3528,4169, +,+,+,+,+,+,+, 596062 Satellite W-chromosome 585 chrUn_NT_464233v1 1639 2142 GGLTR3F2 626 + 1639 2142 0 2 230,220, 0,283, +,+, 596066 LTR ERVL 585 chrUn_NT_464233v1 28193 28681 CR1-Y4 612 + 28193 28681 0 2 195,288, 0,200, +,+, 596089 LINE CR1 585 chrUn_NT_464233v1 30021 30770 CR1-F 289 - 30021 30770 0 2 580,169, 0,580, -,-, 596090 LINE CR1 585 chrUn_NT_464234v1 1809 3764 GGXHOI 377 - 1809 3764 0 2 813,1099, 0,856, -,-, 596097 Satellite W-chromosome 585 chrUn_NT_464234v1 4426 5611 GGXHOI 370 - 4426 5611 0 2 879,292, 0,893, -,-, 596099 Satellite W-chromosome 585 chrUn_NT_464234v1 6919 8682 GGXHOI 379 - 6919 8682 0 4 392,354,357,576, 0,441,816,1187, -,-,-,-, 596102 Satellite W-chromosome 585 chrUn_NT_464234v1 9053 10529 GGXHOI 391 - 9053 10529 0 4 282,307,556,274, 0,303,633,1202, -,-,-,-, 596103 Satellite W-chromosome 585 chrUn_NT_464234v1 10628 11211 GGXHOI 377 - 10628 11211 0 2 360,161, 0,422, -,-, 596104 Satellite W-chromosome 585 chrUn_NT_464234v1 12542 13311 GGXHOI 375 - 12542 13311 0 3 156,186,387, 0,172,382, -,-,-, 596107 Satellite W-chromosome 585 chrUn_NT_464234v1 13493 15737 GGXHOI 387 - 13493 15737 0 6 395,318,389,390,461,149, 0,415,772,1181,1586,2095, -,-,-,-,-,-, 596108 Satellite W-chromosome 585 chrUn_NT_464234v1 16424 17243 GGXHOI 390 - 16424 17243 0 2 432,372, 0,447, -,-, 596110 Satellite W-chromosome 585 chrUn_NT_464234v1 18214 18972 GGXHOI 410 - 18214 18972 0 2 159,586, 0,172, -,-, 596113 Satellite W-chromosome 585 chrUn_NT_464234v1 20046 21631 GGXHOI 384 - 20046 21631 0 4 474,150,561,339, 0,494,658,1246, -,-,-,-, 596116 Satellite W-chromosome 585 chrUn_NT_464234v1 22197 23509 GGXHOI 345 - 22197 23509 0 2 143,1152, 0,160, -,-, 596118 Satellite W-chromosome 585 chrUn_NT_464234v1 23660 24411 GGXHOI 408 - 23660 24411 0 2 161,576, 0,175, -,-, 596119 Satellite W-chromosome 585 chrUn_NT_464234v1 24540 28079 GGXHOI 366 - 24540 28079 0 5 464,618,893,941,496, 0,508,1145,2059,3043, -,-,-,-,-, 596120 Satellite W-chromosome 585 chrUn_NT_464234v1 28636 30514 GGXHOI 390 - 28636 30514 0 4 151,915,390,328, 0,210,1145,1550, -,-,-,-, 596122 Satellite W-chromosome 585 chrUn_NT_464234v1 30603 31763 GGXHOI 379 - 30603 31763 0 2 385,720, 0,440, -,-, 596123 Satellite W-chromosome 585 chrUn_NT_464234v1 34993 35816 GGXHOI 396 - 34993 35816 0 2 409,399, 0,424, -,-, 596127 Satellite W-chromosome 585 chrUn_NT_464235v1 2328 8113 GGLTR3F1 831 + 2328 8113 0 2 496,5287, 0,498, +,+, 596131 LTR ERVL 585 chrUn_NT_464235v1 8113 9045 GGLTR3F2 678 + 8113 9045 0 5 36,231,130,218,202, 0,36,308,512,730, +,+,+,+,+, 596132 LTR ERVL 585 chrUn_NT_464235v1 13900 14781 GGERV28_I-int 819 - 13900 14781 0 3 198,205,477, 0,199,404, -,-,-, 596140 LTR ERVK 585 chrUn_NT_464235v1 14781 17080 GGERVL18-int 761 - 14781 17080 0 2 1968,330, 0,1969, -,-, 596141 LTR ERVL 585 chrUn_NT_464235v1 17078 19380 GGLTR7-int 729 + 17078 19380 0 3 1342,346,610, 0,1345,1692, +,+,+, 596142 LTR ERV1 585 chrUn_NT_464235v1 20174 25252 GGERV10_LTR 741 + 20174 25252 0 5 124,4254,294,35,50, 0,126,4440,4734,5028, +,+,+,+,+, 596145 LTR ERVL 585 chrUn_NT_464235v1 25252 25732 GGERVL-C-int 789 + 25252 25732 0 2 211,268, 0,212, +,+, 596148 LTR ERVL 585 chrUn_NT_464235v1 25732 26821 GGLTR3C2 511 + 25732 26821 0 2 412,129, 0,960, +,+, 596149 LTR ERVL 585 chrUn_NT_464235v1 28840 32155 GGERVL-A-int 858 - 28840 32155 0 4 514,947,261,700, 0,514,2352,2615, -,-,-,-, 596156 LTR ERVL 585 chrUn_NT_464236v1 3131 3981 CR1-D 594 - 3131 3981 0 2 498,346, 0,504, -,-, 596165 LINE CR1 585 chrUn_NT_464236v1 12698 12976 GGLTR3D 744 + 12698 12976 0 2 189,82, 0,196, +,+, 596172 LTR ERVL 585 chrUn_NT_464236v1 14940 16497 GGERV20_I-int 454 - 14940 16497 0 2 264,524, 0,1033, -,-, 596174 LTR ERVL 585 chrUn_NT_464236v1 16684 19640 GGERV20_I-int 462 - 16684 19640 0 4 488,67,489,302, 0,1064,1390,2654, -,-,-,-, 596178 LTR ERVL 585 chrUn_NT_464236v1 20254 33453 CR1-D 682 - 20254 33453 0 4 2558,474,498,346, 0,3018,12349,12853, -,-,-,-, 596182 LINE CR1 585 chrUn_NT_464236v1 24745 30540 GGLTR3F1 864 + 24745 30540 0 2 492,5301, 0,494, +,+, 596185 LTR ERVL 585 chrUn_NT_464236v1 30540 31470 GGLTR3F2 674 + 30540 31470 0 5 36,231,130,218,200, 0,36,308,512,730, +,+,+,+,+, 596186 LTR ERVL 585 chrUn_NT_464237v1 14204 15278 CR1-D 709 - 14204 15278 0 2 775,279, 0,795, -,-, 596199 LINE CR1 585 chrUn_NT_464237v1 27647 28048 (TTAGGG)n 541 + 27647 28048 0 2 205,177, 0,224, +,+, 596209 Simple_repeat Simple_repeat 585 chrUn_NT_464238v1 1202 1488 (ACCCCATAGGG)n 267 + 1202 1488 0 2 132,130, 0,156, +,+, 596214 Satellite Satellite 585 chrUn_NT_464238v1 28396 28591 (CCCTGAC)n 665 + 28396 28591 0 2 85,57, 0,138, +,+, 596275 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 1905 2351 (CGAGG)n 494 + 1905 2351 0 2 148,117, 0,329, +,+, 596296 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 3003 5360 (CGAGG)n 533 + 3003 5360 0 6 692,234,101,156,334,212, 0,707,989,1274,1460,2145, +,+,+,+,+,+, 596303 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 12381 12971 (CGAGG)n 543 + 12381 12971 0 2 178,401, 0,189, +,+, 596331 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 13011 14965 (CGAGG)n 488 + 13011 14965 0 3 733,292,471, 0,912,1483, +,+,+, 596333 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 15273 17307 (CGAGG)n 521 + 15273 17307 0 4 624,417,183,765, 0,637,1065,1269, +,+,+,+, 596339 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 18706 19193 (CGAGG)n 519 + 18706 19193 0 2 283,184, 0,303, +,+, 596347 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 19844 20669 (CGAGG)n 529 + 19844 20669 0 3 184,392,175, 0,240,650, +,+,+, 596352 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 20727 21619 (CGAGG)n 561 + 20727 21619 0 3 174,486,194, 0,212,698, +,+,+, 596354 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 22076 22927 (CGAGG)n 506 + 22076 22927 0 2 285,389, 0,462, +,+, 596358 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 23574 24903 (CGAGG)n 558 + 23574 24903 0 5 178,473,179,183,178, 0,201,709,922,1151, +,+,+,+,+, 596363 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 26232 28601 (CGAGG)n 558 + 26232 28601 0 8 501,122,27,42,23,225,141,245, 0,682,1074,1289,1512,1539,1795,2124, +,+,+,+,+,+,+,+, 596371 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 29177 29931 (CGAGG)n 586 + 29177 29931 0 3 129,28,183, 0,524,571, +,+,+, 596380 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 29971 30450 (CGAGG)n 618 + 29971 30450 0 2 254,40, 0,439, +,+, 596384 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 30225 30777 (CAAGG)n 459 + 30225 30777 0 3 185,144,36, 0,185,516, +,+,+, 596385 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 30554 31020 (CGAGG)n 634 + 30554 31020 0 2 187,279, 0,187, +,+, 596386 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 31010 31596 (CGAGG)n 575 + 31010 31596 0 3 179,59,189, 0,338,397, +,+,+, 596387 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 31673 32467 (CGAGG)n 527 + 31673 32467 0 3 398,101,112, 0,398,682, +,+,+, 596390 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 32529 33517 (CGAGG)n 503 + 32529 33517 0 3 224,535,192, 0,242,796, +,+,+, 596393 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 33621 34072 (CGAGG)n 474 + 33621 34072 0 2 193,200, 0,251, +,+, 596395 Simple_repeat Simple_repeat 585 chrUn_NT_464239v1 34190 35263 (CGAGG)n 538 + 34190 35263 0 3 259,247,349, 0,446,724, +,+,+, 596397 Simple_repeat Simple_repeat 585 chrUn_NT_464240v1 1547 2536 (CCTTG)n 515 + 1547 2536 0 3 176,353,43, 0,216,946, +,+,+, 596405 Simple_repeat Simple_repeat 585 chrUn_NT_464240v1 11212 12480 CR1-H 607 + 11212 12480 0 2 1155,113, 0,1155, +,+, 596415 LINE CR1 585 chrUn_NT_464240v1 14586 15206 CR1-H 675 + 14586 15206 0 2 475,139, 0,481, +,+, 596420 LINE CR1 585 chrUn_NT_464240v1 26432 27703 CR1-H 627 + 26432 27703 0 2 1158,113, 0,1158, +,+, 596432 LINE CR1 585 chrUn_NT_464240v1 29908 30531 CR1-H 675 + 29908 30531 0 2 478,139, 0,484, +,+, 596435 LINE CR1 585 chrUn_NT_464241v1 1046 2388 GGLTR7-int 385 + 1046 2388 0 3 60,210,277, 0,86,1065, +,+,+, 596439 LTR ERV1 585 chrUn_NT_464241v1 12957 13207 (CCTCG)n 402 + 12957 13207 0 2 55,90, 0,160, +,+, 596458 Simple_repeat Simple_repeat 585 chrUn_NT_464241v1 13368 13751 (CCTTG)n 577 + 13368 13751 0 2 184,182, 0,201, +,+, 596462 Simple_repeat Simple_repeat 585 chrUn_NT_464241v1 16041 18733 GGERVL-B-int 743 + 16041 18733 0 2 321,2371, 0,321, +,+, 596467 LTR ERVL 585 chrUn_NT_464241v1 19468 20835 GGLTR7-int 331 + 19468 20835 0 3 101,259,258, 0,102,1109, +,+,+, 596469 LTR ERV1 585 chrUn_NT_464241v1 30871 31759 CR1-F0 883 - 30871 31759 0 2 139,749, 0,139, -,-, 596480 LINE CR1 585 chrUn_NT_464241v1 31779 32782 (CCTTG)n 548 + 31779 32782 0 4 177,52,31,210, 0,347,580,793, +,+,+,+, 596481 Simple_repeat Simple_repeat 585 chrUn_NT_464241v1 33518 33981 (GCCTG)n 488 + 33518 33981 0 2 252,185, 0,278, +,+, 596489 Simple_repeat Simple_repeat 585 chrUn_NT_464242v1 428 3376 GGXHOI 454 + 428 3376 0 5 222,413,149,524,1491, 0,258,711,896,1457, +,+,+,+,+, 596497 Satellite W-chromosome 585 chrUn_NT_464242v1 3689 27341 GGXHOI 441 + 3689 27341 0 3 4711,13602,5242, 0,4748,18410, +,+,+, 596498 Satellite W-chromosome 585 chrUn_NT_464242v1 33554 34768 GGXHOI 405 + 33554 34768 0 2 598,580, 0,634, +,+, 596502 Satellite W-chromosome 585 chrUn_NT_464243v1 1512 2721 GGXHOI 387 + 1512 2721 0 3 181,249,730, 0,211,479, +,+,+, 596505 Satellite W-chromosome 585 chrUn_NT_464243v1 2809 4564 GGXHOI 357 + 2809 4564 0 3 621,187,876, 0,657,879, +,+,+, 596506 Satellite W-chromosome 585 chrUn_NT_464243v1 4987 6198 GGXHOI 373 + 4987 6198 0 3 332,395,388, 0,371,823, +,+,+, 596508 Satellite W-chromosome 585 chrUn_NT_464243v1 11251 11936 GGXHOI 341 + 11251 11936 0 3 187,275,174, 0,199,511, +,+,+, 596523 Satellite W-chromosome 585 chrUn_NT_464243v1 12001 12822 GGXHOI 333 + 12001 12822 0 2 99,666, 0,155, +,+, 596524 Satellite W-chromosome 585 chrUn_NT_464243v1 12859 14368 GGXHOI 390 + 12859 14368 0 2 419,1069, 0,440, +,+, 596526 Satellite W-chromosome 585 chrUn_NT_464243v1 14381 15953 GGXHOI 398 - 14381 15953 0 2 1238,284, 0,1288, -,-, 596527 Satellite W-chromosome 585 chrUn_NT_464243v1 16043 19609 GGXHOI 369 - 16043 19609 0 6 476,274,351,1198,520,568, 0,501,803,1188,2441,2998, -,-,-,-,-,-, 596528 Satellite W-chromosome 585 chrUn_NT_464243v1 20812 22648 GGXHOI 380 - 20812 22648 0 3 667,718,407, 0,689,1429, -,-,-, 596533 Satellite W-chromosome 585 chrUn_NT_464243v1 25294 26462 GGXHOI 377 - 25294 26462 0 2 730,416, 0,752, -,-, 596539 Satellite W-chromosome 585 chrUn_NT_464243v1 26499 28357 GGXHOI 407 - 26499 28357 0 2 401,1441, 0,417, -,-, 596541 Satellite W-chromosome 585 chrUn_NT_464243v1 31523 31996 GGXHOI 311 - 31523 31996 0 2 239,205, 0,268, -,-, 596546 Satellite W-chromosome 585 chrUn_NT_464243v1 32113 32794 GGXHOI 346 - 32113 32794 0 2 33,618, 0,63, -,-, 596547 Satellite W-chromosome 585 chrUn_NT_464243v1 32881 34003 GGXHOI 370 - 32881 34003 0 2 662,448, 0,674, -,-, 596549 Satellite W-chromosome 585 chrUn_NT_464244v1 21114 21236 G-rich 596 + 21114 21236 0 2 38,30, 0,92, +,+, 596595 Low_complexity Low_complexity 585 chrUn_NT_464244v1 21637 22842 CR1-D2 723 + 21637 22842 0 2 437,430, 0,775, +,+, 596596 LINE CR1 585 chrUn_NT_464244v1 34120 34576 CR1-X2 385 + 34120 34576 0 2 227,158, 0,298, +,+, 596606 LINE CR1 585 chrUn_NT_464245v1 934 1477 (CAGGC)n 492 + 934 1477 0 2 267,249, 0,294, +,+, 596614 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 1420 1748 (CAAGG)n 518 + 1420 1748 0 2 102,40, 0,288, +,+, 596615 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 1735 2167 (CAGGC)n 517 + 1735 2167 0 2 208,224, 0,208, +,+, 596617 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 3962 4327 (CCTTT)n 446 + 3962 4327 0 2 11,6, 0,359, +,+, 596623 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 13907 15292 GGLTR7-int 307 - 13907 15292 0 3 281,313,101, 0,969,1284, -,-,-, 596631 LTR ERV1 585 chrUn_NT_464245v1 16028 18872 GGERVL-B-int 711 - 16028 18872 0 2 917,1927, 0,917, -,-, 596633 LTR ERVL 585 chrUn_NT_464245v1 22152 22631 (CAAGG)n 536 + 22152 22631 0 3 49,209,219, 0,49,260, +,+,+, 596644 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 22599 24080 (CAGGC)n 568 + 22599 24080 0 6 79,154,22,37,219,273, 0,253,585,948,985,1208, +,+,+,+,+,+, 596645 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 24802 25162 (CAAGG)n 572 + 24802 25162 0 2 137,34, 0,326, +,+, 596655 Simple_repeat Simple_repeat 585 chrUn_NT_464245v1 30568 30731 G-rich 424 + 30568 30731 0 2 72,51, 0,112, +,+, 596665 Low_complexity Low_complexity 585 chrUn_NT_464246v1 8212 23717 GGXHOI 416 - 8212 23717 0 12 937,608,607,525,2099,517,2844,395,1393,2344,482,2514, 0,955,1584,2243,2783,4897,5436,8302,8717,10130,12495,12991, -,-,-,-,-,-,-,-,-,-,-,-, 596682 Satellite W-chromosome 585 chrUn_NT_464246v1 23782 31093 GGXHOI 398 - 23782 31093 0 10 1558,509,392,2431,353,700,163,153,146,685, 0,1573,2101,2513,4966,5344,6097,6283,6456,6626, -,-,-,-,-,-,-,-,-,-, 596683 Satellite W-chromosome 585 chrUn_NT_464246v1 31162 32548 GGXHOI 367 - 31162 32548 0 2 788,580, 0,806, -,-, 596684 Satellite W-chromosome 585 chrUn_NT_464246v1 32650 34850 GGXHOI 416 - 32650 34850 0 2 1555,624, 0,1576, -,-, 596685 Satellite W-chromosome 585 chrUn_NT_464247v1 1744 1883 (GTT)n 480 + 1744 1883 0 2 38,54, 0,85, +,+, 596692 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 9502 9750 (GTTCTTTCC)n 969 + 9502 9750 0 3 44,45,44, 0,102,204, +,+,+, 596715 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 11376 11610 (GTTGTTTCC)n 883 + 11376 11610 0 2 79,104, 0,130, +,+, 596723 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 13782 13922 (GTTCTTTCC)n 920 + 13782 13922 0 2 45,39, 0,101, +,+, 596728 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 15302 15445 (GTTCTTTCC)n 931 + 15302 15445 0 2 46,44, 0,99, +,+, 596733 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 20064 20210 (GTTCTTTCC)n 953 + 20064 20210 0 2 45,44, 0,102, +,+, 596749 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 24070 24216 (GTTCTTTCC)n 953 + 24070 24216 0 2 45,44, 0,102, +,+, 596759 Simple_repeat Simple_repeat 585 chrUn_NT_464247v1 27829 28030 (GTTGTTTCC)n 874 + 27829 28030 0 2 98,52, 0,149, +,+, 596771 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 11701 12690 CR1-X 484 + 11701 12690 0 2 534,177, 0,812, +,+, 596809 LINE CR1 585 chrUn_NT_464248v1 16317 17004 (CAAGG)n 715 + 16317 17004 0 2 480,207, 0,480, +,+, 596815 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 17346 18121 (CAAGG)n 626 + 17346 18121 0 3 198,264,118, 0,215,657, +,+,+, 596818 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 18196 18845 (CAAGG)n 591 + 18196 18845 0 2 261,388, 0,261, +,+, 596821 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 19346 20466 (CAAGG)n 659 + 19346 20466 0 4 124,325,211,249, 0,313,658,871, +,+,+,+, 596825 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 20531 21002 (CAAGG)n 574 + 20531 21002 0 2 229,59, 0,412, +,+, 596828 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 21391 21969 (CAAGG)n 604 + 21391 21969 0 2 342,59, 0,519, +,+, 596833 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 22108 23485 (CAAGG)n 637 + 22108 23485 0 5 400,263,193,94,212, 0,418,681,894,1165, +,+,+,+,+, 596836 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 23528 24158 (CAAGG)n 591 + 23528 24158 0 3 212,197,20, 0,233,610, +,+,+, 596839 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 24544 25973 GGXHOI 368 + 24544 25973 0 2 1030,349, 0,1080, +,+, 596844 Satellite W-chromosome 585 chrUn_NT_464248v1 26012 27060 (CCTCG)n 617 + 26012 27060 0 4 207,117,289,180, 0,396,568,868, +,+,+,+, 596846 Simple_repeat Simple_repeat 585 chrUn_NT_464248v1 27080 32010 GGXHOI 403 + 27080 32010 0 8 1015,529,980,651,563,358,230,450, 0,1027,1571,2566,3279,3862,4235,4480, +,+,+,+,+,+,+,+, 596848 Satellite W-chromosome 585 chrUn_NT_464248v1 32182 33504 GGXHOI 407 + 32182 33504 0 2 374,928, 0,394, +,+, 596849 Satellite W-chromosome 585 chrUn_NT_464249v1 4825 7016 GGXHOI 391 + 4825 7016 0 2 130,2048, 0,143, +,+, 596852 Satellite W-chromosome 585 chrUn_NT_464249v1 7835 11937 GGXHOI 353 + 7835 11937 0 4 401,124,2422,1018, 0,457,620,3084, +,+,+,+, 596854 Satellite W-chromosome 585 chrUn_NT_464249v1 12034 14895 GGXHOI 378 + 12034 14895 0 2 1540,1306, 0,1555, +,+, 596855 Satellite W-chromosome 585 chrUn_NT_464249v1 18765 21681 GGXHOI 414 + 18765 21681 0 4 1144,190,1077,419, 0,1193,1402,2497, +,+,+,+, 596857 Satellite W-chromosome 585 chrUn_NT_464249v1 22324 30279 GGXHOI 399 + 22324 30279 0 6 1596,2055,174,1483,707,1803, 0,1614,3692,3881,5425,6152, +,+,+,+,+,+, 596859 Satellite W-chromosome 585 chrUn_NT_464249v1 30400 31871 GGXHOI 372 + 30400 31871 0 2 456,979, 0,492, +,+, 596860 Satellite W-chromosome 585 chrUn_NT_464249v1 31938 32874 GGXHOI 356 + 31938 32874 0 3 379,195,301, 0,406,635, +,+,+, 596861 Satellite W-chromosome 585 chrUn_NT_464249v1 32943 34582 GGXHOI 411 + 32943 34582 0 3 147,473,986, 0,165,653, +,+,+, 596862 Satellite W-chromosome 585 chrUn_NT_464250v1 6628 8273 GGXHOI 377 - 6628 8273 0 2 393,1194, 0,451, -,-, 596870 Satellite W-chromosome 585 chrUn_NT_464250v1 8479 9424 GGXHOI 315 - 8479 9424 0 2 383,509, 0,436, -,-, 596871 Satellite W-chromosome 585 chrUn_NT_464250v1 10171 11464 GGXHOI 357 - 10171 11464 0 2 388,843, 0,450, -,-, 596873 Satellite W-chromosome 585 chrUn_NT_464250v1 17191 18600 GGXHOI 352 - 17191 18600 0 2 631,756, 0,653, -,-, 596883 Satellite W-chromosome 585 chrUn_NT_464250v1 18802 20422 GGXHOI 362 - 18802 20422 0 2 393,1168, 0,452, -,-, 596884 Satellite W-chromosome 585 chrUn_NT_464250v1 23244 24586 GGXHOI 372 - 23244 24586 0 2 927,397, 0,945, -,-, 596887 Satellite W-chromosome 585 chrUn_NT_464250v1 27232 31118 GGXHOI 363 - 27232 31118 0 3 581,636,2631, 0,603,1255, -,-,-, 596890 Satellite W-chromosome 585 chrUn_NT_464251v1 4422 10458 GGXHOI 375 - 4422 10458 0 6 244,1164,311,189,2179,1737, 0,299,1522,1893,2104,4299, -,-,-,-,-,-, 596900 Satellite W-chromosome 585 chrUn_NT_464251v1 10557 13063 GGXHOI 399 - 10557 13063 0 2 800,1683, 0,823, -,-, 596901 Satellite W-chromosome 585 chrUn_NT_464251v1 13200 15901 GGXHOI 383 - 13200 15901 0 4 1022,756,478,349, 0,1038,1815,2352, -,-,-,-, 596902 Satellite W-chromosome 585 chrUn_NT_464251v1 16004 18990 GGXHOI 394 - 16004 18990 0 4 1091,677,484,673, 0,1108,1806,2313, -,-,-,-, 596903 Satellite W-chromosome 585 chrUn_NT_464251v1 20118 22388 GGXHOI 389 - 20118 22388 0 4 483,715,562,461, 0,499,1231,1809, -,-,-,-, 596905 Satellite W-chromosome 585 chrUn_NT_464251v1 22452 23575 GGXHOI 399 - 22452 23575 0 3 212,517,355, 0,233,768, -,-,-, 596906 Satellite W-chromosome 585 chrUn_NT_464251v1 23675 27654 GGXHOI 389 - 23675 27654 0 4 1796,481,754,894, 0,1813,2310,3085, -,-,-,-, 596907 Satellite W-chromosome 585 chrUn_NT_464251v1 28583 33640 GGXHOI 379 - 28583 33640 0 5 1422,1575,1484,308,201, 0,1438,3030,4531,4856, -,-,-,-,-, 596909 Satellite W-chromosome 585 chrUn_NT_464252v1 310 1324 (CCTCG)n 524 + 310 1324 0 2 646,353, 0,661, +,+, 596912 Simple_repeat Simple_repeat 585 chrUn_NT_464252v1 1498 1863 (CCTCG)n 519 + 1498 1863 0 2 176,178, 0,187, +,+, 596915 Simple_repeat Simple_repeat 585 chrUn_NT_464253v1 13053 15979 GGXHOI 448 - 13053 15979 0 2 1264,1643, 0,1283, -,-, 596927 Satellite W-chromosome 585 chrUn_NT_464253v1 16076 25950 GGXHOI 409 - 16076 25950 0 4 3137,987,3937,1730, 0,3162,4163,8144, -,-,-,-, 596929 Satellite W-chromosome 585 chrUn_NT_464253v1 26191 28040 GGXHOI 359 - 26191 28040 0 2 1411,401, 0,1448, -,-, 596930 Satellite W-chromosome 585 chrUn_NT_464253v1 28135 31506 GGXHOI 411 - 28135 31506 0 4 464,66,2031,720, 0,523,606,2651, -,-,-,-, 596931 Satellite W-chromosome 585 chrUn_NT_464253v1 31595 34423 GGXHOI 315 - 31595 34423 0 3 961,148,1677, 0,989,1151, -,-,-, 596932 Satellite W-chromosome 585 chrUn_NT_464254v1 12524 12602 (T)n 791 + 12524 12602 0 2 38,19, 0,59, +,+, 596948 Simple_repeat Simple_repeat 585 chrUn_NT_464254v1 16036 16094 (CCCACA)n 350 + 16036 16094 0 2 20,18, 0,40, +,+, 596962 Simple_repeat Simple_repeat 585 chrUn_NT_464254v1 32885 32964 (GCGGTG)n 362 + 32885 32964 0 2 8,13, 0,66, +,+, 596986 Simple_repeat Simple_repeat 585 chrUn_NT_464254v1 33605 34025 (ACCCCATAGGG)n 195 - 33605 34025 0 3 125,119,117, 0,157,303, -,-,-, 596991 Satellite Satellite 585 chrUn_NT_464255v1 932 1389 CR1-H 683 - 932 1389 0 2 163,294, 0,163, -,-, 596993 LINE CR1 585 chrUn_NT_464255v1 11508 12131 CR1-H 677 - 11508 12131 0 2 139,478, 0,145, -,-, 597001 LINE CR1 585 chrUn_NT_464255v1 14316 14772 CR1-H 679 - 14316 14772 0 2 162,294, 0,162, -,-, 597005 LINE CR1 585 chrUn_NT_464255v1 24959 25584 CR1-H 654 - 24959 25584 0 2 139,480, 0,145, -,-, 597013 LINE CR1 585 chrUn_NT_464255v1 28392 28848 CR1-H 649 - 28392 28848 0 2 162,294, 0,162, -,-, 597017 LINE CR1 585 chrUn_NT_464256v1 18311 18447 GA-rich 272 + 18311 18447 0 2 34,19, 0,117, +,+, 597065 Low_complexity Low_complexity 585 chrUn_NT_464257v1 25517 25552 (TCCCC)n 566 + 25517 25552 0 2 6,7, 0,28, +,+, 597135 Simple_repeat Simple_repeat 585 chrUn_NT_464258v1 1417 1526 (T)n 914 + 1417 1526 0 2 25,38, 0,71, +,+, 597152 Simple_repeat Simple_repeat 585 chrUn_NT_464259v1 511 31074 GGXHOI 446 + 511 31074 0 43 454,64,436,987,1480,64,436,989,519,989,1480,64,436,989,1480,64,1395,64,434,946,64,1023,64,1019,64,436,989,764,332,1100,64,899,64,1062,1041,1102,64,430,944,64,1135,2150,708, 0,469,553,1002,2004,3541,3625,4074,5078,5610,6614,8151,8235,8684,9688,11225,11309,12761,12845,13292,14295,14379,15459,15543,16619,16703,17152,18156,18961,19308,20465,20549,21505,21589,22666,23722,24881,24965,25408,26409,26493,27648,29855, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 597189 Satellite W-chromosome 585 chrUn_NT_464259v1 31159 32033 GGXHOI 353 + 31159 32033 0 2 292,567, 0,307, +,+, 597190 Satellite W-chromosome 585 chrUn_NT_464260v1 14397 15062 GGLTR11-int 486 + 14397 15062 0 2 125,228, 0,437, +,+, 597203 LTR ERV1 585 chrUn_NT_464262v1 4444 7569 GGLTR7-int 413 + 4444 7569 0 4 114,1643,949,277, 0,114,1852,2848, +,+,+,+, 597218 LTR ERV1 585 chrUn_NT_464262v1 22793 25905 GGLTR7-int 424 + 22793 25905 0 4 116,1626,949,278, 0,116,1838,2834, +,+,+,+, 597231 LTR ERV1 585 chrUn_NT_464264v1 2827 6069 GGXHOI 402 - 2827 6069 0 2 822,2397, 0,845, -,-, 597269 Satellite W-chromosome 585 chrUn_NT_464264v1 6166 11665 GGXHOI 368 - 6166 11665 0 3 314,3490,1608, 0,352,3891, -,-,-, 597270 Satellite W-chromosome 585 chrUn_NT_464264v1 11764 14434 GGXHOI 402 - 11764 14434 0 2 185,2473, 0,197, -,-, 597271 Satellite W-chromosome 585 chrUn_NT_464264v1 14523 17328 GGXHOI 396 - 14523 17328 0 2 2104,664, 0,2141, -,-, 597272 Satellite W-chromosome 585 chrUn_NT_464264v1 17418 21999 GGXHOI 358 - 17418 21999 0 2 1053,3511, 0,1070, -,-, 597273 Satellite W-chromosome 585 chrUn_NT_464264v1 22088 33980 GGXHOI 372 - 22088 33980 0 15 1063,872,306,2021,303,1074,583,408,141,1706,564,850,743,427,504, 0,1086,1979,2308,4368,4692,5790,6397,6828,6984,8709,9288,10176,10940,11388, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 597274 Satellite W-chromosome 585 chrUn_NT_464265v1 226 1833 (CGAGG)n 551 + 226 1833 0 5 126,450,176,176,439, 0,304,767,971,1168, +,+,+,+,+, 597276 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 3075 3666 (CGAGG)n 540 + 3075 3666 0 2 341,250, 0,341, +,+, 597285 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 4721 5086 (CGAGG)n 504 + 4721 5086 0 2 134,55, 0,310, +,+, 597290 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 5499 5681 G-rich 80 + 5499 5681 0 2 16,15, 0,167, +,+, 597294 Low_complexity Low_complexity 585 chrUn_NT_464265v1 6184 6790 (CGAGG)n 530 + 6184 6790 0 2 180,391, 0,215, +,+, 597298 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 6854 7228 (CGAGG)n 535 + 6854 7228 0 2 175,177, 0,197, +,+, 597300 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 7283 7817 (CGAGG)n 552 + 7283 7817 0 2 174,336, 0,198, +,+, 597302 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 10474 11152 (CGAGG)n 529 + 10474 11152 0 4 47,169,239,177, 0,59,245,501, +,+,+,+, 597311 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 12210 15182 (CGAGG)n 486 + 12210 15182 0 4 377,605,748,995, 0,398,1051,1977, +,+,+,+, 597317 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 15823 16912 (CGAGG)n 539 + 15823 16912 0 3 300,503,70, 0,337,1019, +,+,+, 597322 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 16977 17461 (CGAGG)n 548 + 16977 17461 0 2 294,177, 0,307, +,+, 597325 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 17557 19092 (CGAGG)n 530 + 17557 19092 0 2 705,652, 0,883, +,+, 597326 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 19218 19754 (CGAGG)n 549 + 19218 19754 0 2 178,304, 0,232, +,+, 597329 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 22165 22790 (CGAGG)n 528 + 22165 22790 0 2 402,178, 0,447, +,+, 597344 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 23280 24169 (CGAGG)n 524 + 23280 24169 0 3 237,184,406, 0,261,483, +,+,+, 597347 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 24500 26215 (CGAGG)n 552 + 24500 26215 0 3 698,80,601, 0,1015,1114, +,+,+, 597350 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 27624 28463 (CGAGG)n 573 + 27624 28463 0 4 179,183,184,179, 0,219,431,660, +,+,+,+, 597358 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 28605 29870 (CGAGG)n 542 + 28605 29870 0 3 863,179,197, 0,889,1068, +,+,+, 597360 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 29966 31067 (CGAGG)n 606 + 29966 31067 0 3 219,35,313, 0,401,788, +,+,+, 597362 Simple_repeat Simple_repeat 585 chrUn_NT_464265v1 33224 33927 (CCTCG)n 450 + 33224 33927 0 2 366,297, 0,406, +,+, 597373 Simple_repeat Simple_repeat 585 chrUn_NT_464266v1 11873 12446 CR1-X 397 - 11873 12446 0 3 277,126,170, 0,277,403, -,-,-, 597382 LINE CR1 585 chrUn_NT_464266v1 18450 19568 CR1-B2 698 + 18450 19568 0 2 225,890, 0,228, +,+, 597385 LINE CR1 585 chrUn_NT_464266v1 24512 24714 CR1-X 446 + 24512 24714 0 2 51,151, 0,51, +,+, 597393 LINE CR1 585 chrUn_NT_464267v1 200 27459 GGXHOI 403 - 200 27459 0 17 787,305,2654,2210,308,2698,283,2338,283,633,1684,1691,2998,3384,310,1692,2631, 0,801,1129,3799,6024,6355,9076,9403,11764,12091,12747,14454,16160,19181,22580,22913,24628, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 597402 Satellite W-chromosome 585 chrUn_NT_464267v1 29016 32702 GGXHOI 354 - 29016 32702 0 3 2151,1078,385, 0,2168,3301, -,-,-, 597404 Satellite W-chromosome 585 chrUn_NT_464268v1 12135 31874 GGXHOI 419 - 12135 31874 0 15 1893,149,1677,480,2390,144,2173,480,860,2006,2753,144,2310,926,1029, 0,1910,2075,3769,4265,6676,6837,9027,9523,10399,12422,15196,15357,17722,18710, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 597412 Satellite W-chromosome 585 chrUn_NT_464268v1 31993 33833 GGXHOI 358 - 31993 33833 0 2 1379,406, 0,1434, -,-, 597413 Satellite W-chromosome 585 chrUn_NT_464269v1 18379 18471 A-rich 400 + 18379 18471 0 2 22,11, 0,81, +,+, 597459 Low_complexity Low_complexity 585 chrUn_NT_464269v1 26664 28086 GGLTR7B 502 + 26664 28086 0 2 837,126, 0,1296, +,+, 597473 LTR ERV1 585 chrUn_NT_464269v1 30224 32371 CR1-C 787 + 30224 32371 0 2 1543,604, 0,1543, +,+, 597475 LINE CR1 585 chrUn_NT_464270v1 3221 4068 Z-REP 531 + 3221 4068 0 2 440,323, 0,524, +,+, 597480 Satellite macro 585 chrUn_NT_464270v1 8759 10683 GGLTR7-int 663 - 8759 10683 0 4 33,74,657,529, 0,34,738,1395, -,-,-,-, 597484 LTR ERV1 585 chrUn_NT_464270v1 17216 20857 GGERV28_I-int 85 + 17216 20857 0 2 1340,1993, 0,1648, +,+, 597486 LTR ERVK 585 chrUn_NT_464270v1 21095 21945 GGLTR7-int 759 + 21095 21945 0 3 213,262,353, 0,235,497, +,+,+, 597487 LTR ERV1 585 chrUn_NT_464271v1 3859 4724 (CCTTG)n 666 + 3859 4724 0 3 119,75,492, 0,298,373, +,+,+, 597509 Simple_repeat Simple_repeat 585 chrUn_NT_464271v1 5039 6539 (CCTTG)n 684 + 5039 6539 0 4 184,178,235,533, 0,195,373,967, +,+,+,+, 597514 Simple_repeat Simple_repeat 585 chrUn_NT_464271v1 20146 21251 GGERVL-A-int 295 - 20146 21251 0 3 109,242,529, 0,199,576, -,-,-, 597527 LTR ERVL 585 chrUn_NT_464271v1 26280 26748 CR1-X2 377 + 26280 26748 0 2 236,161, 0,307, +,+, 597536 LINE CR1 585 chrUn_NT_464272v1 32962 33312 (CAGGC)n 486 + 32962 33312 0 2 122,49, 0,301, +,+, 597547 Simple_repeat Simple_repeat 585 chrUn_NT_464273v1 10951 12208 GGLTR7-int 272 - 10951 12208 0 3 248,315,102, 0,838,1155, -,-,-, 597562 LTR ERV1 585 chrUn_NT_464273v1 12933 15564 GGERVL-B-int 507 - 12933 15564 0 2 2281,349, 0,2282, -,-, 597564 LTR ERVL 585 chrUn_NT_464273v1 18076 18454 (CAAGG)n 609 + 18076 18454 0 2 176,202, 0,176, +,+, 597569 Simple_repeat Simple_repeat 585 chrUn_NT_464273v1 26899 27254 G-rich 500 + 26899 27254 0 2 35,262, 0,93, +,+, 597587 Low_complexity Low_complexity 585 chrUn_NT_464274v1 8918 9331 CR1-H 702 + 8918 9331 0 2 103,310, 0,103, +,+, 597598 LINE CR1 585 chrUn_NT_464274v1 21641 21838 CR1-H 638 + 21641 21838 0 2 102,95, 0,102, +,+, 597608 LINE CR1 585 chrUn_NT_464275v1 1182 1675 GGXHOI 304 - 1182 1675 0 2 184,258, 0,235, -,-, 597618 Satellite W-chromosome 585 chrUn_NT_464275v1 1761 6275 GGXHOI 416 - 1761 6275 0 5 985,860,528,1439,574, 0,1012,1919,2474,3940, -,-,-,-,-, 597619 Satellite W-chromosome 585 chrUn_NT_464275v1 7809 17239 GGXHOI 413 - 7809 17239 0 8 858,527,4363,862,528,860,528,654, 0,905,1460,5850,6759,7314,8221,8776, -,-,-,-,-,-,-,-, 597622 Satellite W-chromosome 585 chrUn_NT_464275v1 17270 20848 GGXHOI 415 - 17270 20848 0 3 1440,852,1202, 0,1466,2376, -,-,-, 597624 Satellite W-chromosome 585 chrUn_NT_464275v1 20880 22993 GGXHOI 390 - 20880 22993 0 3 805,606,655, 0,829,1458, -,-,-, 597626 Satellite W-chromosome 585 chrUn_NT_464275v1 23024 25145 GGXHOI 403 - 23024 25145 0 2 864,1210, 0,911, -,-, 597628 Satellite W-chromosome 585 chrUn_NT_464275v1 25174 27545 GGXHOI 371 - 25174 27545 0 5 615,192,417,791,194, 0,667,914,1375,2177, -,-,-,-,-, 597630 Satellite W-chromosome 585 chrUn_NT_464275v1 28162 30134 GGXHOI 338 - 28162 30134 0 3 939,247,745, 0,955,1227, -,-,-, 597633 Satellite W-chromosome 585 chrUn_NT_464275v1 30811 31670 GGXHOI 355 - 30811 31670 0 3 95,266,409, 0,121,450, -,-,-, 597636 Satellite W-chromosome 585 chrUn_NT_464275v1 32080 32996 GGXHOI 413 - 32080 32996 0 2 725,128, 0,788, -,-, 597639 Satellite W-chromosome 585 chrUn_NT_464277v1 25230 25367 CR1-E 613 - 25230 25367 0 2 58,48, 0,89, -,-, 597686 LINE CR1 585 chrUn_NT_464277v1 27892 30573 GGLTR7-int 502 + 27892 30573 0 3 118,1635,833, 0,118,1848, +,+,+, 597691 LTR ERV1 585 chrUn_NT_464278v1 4065 10439 Charlie12_GGa 474 - 4065 10439 0 2 67,91, 0,6283, -,-, 597702 DNA hAT-Charlie 585 chrUn_NT_464278v1 14061 14248 CR1-E 654 + 14061 14248 0 2 55,58, 0,129, +,+, 597722 LINE CR1 585 chrUn_NT_464278v1 20450 20543 CR1-E 632 + 20450 20543 0 2 49,44, 0,49, +,+, 597733 LINE CR1 585 chrUn_NT_464278v1 31621 32047 CR1-C3 493 - 31621 32047 0 3 74,26,265, 0,74,161, -,-,-, 597753 LINE CR1 585 chrUn_NT_464279v1 1657 2543 G-rich 358 + 1657 2543 0 2 412,419, 0,467, +,+, 597761 Low_complexity Low_complexity 585 chrUn_NT_464279v1 4677 7138 GGLTR7-int 331 + 4677 7138 0 3 405,1215,793, 0,445,1668, +,+,+, 597765 LTR ERV1 585 chrUn_NT_464279v1 7150 9573 GGERV10_LTR 849 - 7150 9573 0 2 38,41, 0,2382, -,-, 597768 LTR ERVL 585 chrUn_NT_464279v1 7316 9531 GGLTR10D-int 918 - 7316 9531 0 2 364,1848, 0,367, -,-, 597769 LTR ERVK 585 chrUn_NT_464279v1 9619 10568 (CGAGG)n 612 + 9619 10568 0 2 565,211, 0,738, +,+, 597771 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 10619 11166 (CGAGG)n 529 + 10619 11166 0 2 325,186, 0,361, +,+, 597774 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 11234 12390 (CGAGG)n 529 + 11234 12390 0 3 489,125,340, 0,672,816, +,+,+, 597776 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 12772 13347 (CGAGG)n 553 + 12772 13347 0 3 177,182,177, 0,201,398, +,+,+, 597781 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 13708 14130 (CGAGG)n 555 + 13708 14130 0 2 230,179, 0,243, +,+, 597785 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 14185 15342 (CGAGG)n 521 + 14185 15342 0 3 316,321,466, 0,327,691, +,+,+, 597787 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 15595 17221 (CGAGG)n 514 + 15595 17221 0 4 180,391,488,486, 0,215,637,1140, +,+,+,+, 597789 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 17858 18763 (CGAGG)n 549 + 17858 18763 0 3 323,179,337, 0,358,568, +,+,+, 597792 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 18899 19632 (CGAGG)n 537 + 18899 19632 0 2 177,535, 0,198, +,+, 597793 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 19698 20279 (CGAGG)n 523 + 19698 20279 0 2 184,357, 0,224, +,+, 597795 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 21069 21696 (CGAGG)n 518 + 21069 21696 0 2 269,179, 0,448, +,+, 597801 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 22232 23218 (CGAGG)n 519 + 22232 23218 0 3 116,357,309, 0,290,677, +,+,+, 597806 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 23324 28040 (CGAGG)n 531 + 23324 28040 0 11 369,187,1079,30,221,434,138,481,156,258,188, 0,540,757,2164,2209,2607,3072,3395,3900,4229,4528, +,+,+,+,+,+,+,+,+,+,+, 597809 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 28380 29239 (CGAGG)n 542 + 28380 29239 0 2 659,20, 0,839, +,+, 597818 Simple_repeat Simple_repeat 585 chrUn_NT_464279v1 30256 32000 (CGAGG)n 523 + 30256 32000 0 3 1170,332,179, 0,1188,1565, +,+,+, 597823 Simple_repeat Simple_repeat 585 chrUn_NT_464280v1 12590 13006 CR1-Y 653 - 12590 13006 0 2 128,288, 0,128, -,-, 597840 LINE CR1 585 chrUn_NT_464280v1 28273 28843 (CAAGG)n 607 + 28273 28843 0 2 306,264, 0,306, +,+, 597848 Simple_repeat Simple_repeat 585 chrUn_NT_464280v1 29867 30210 (CAGGC)n 590 + 29867 30210 0 2 126,39, 0,304, +,+, 597855 Simple_repeat Simple_repeat 585 chrUn_NT_464280v1 30154 30466 (CTAGG)n 474 + 30154 30466 0 2 69,65, 0,247, +,+, 597857 Simple_repeat Simple_repeat 585 chrUn_NT_464280v1 31755 32266 (CAGGC)n 584 + 31755 32266 0 2 243,86, 0,425, +,+, 597865 Simple_repeat Simple_repeat 585 chrUn_NT_464281v1 31998 32174 (CCCTC)n 204 + 31998 32174 0 2 57,82, 0,94, +,+, 597941 Simple_repeat Simple_repeat 585 chrUn_NT_464281v1 32681 32811 (CCCTT)n 352 + 32681 32811 0 2 55,44, 0,86, +,+, 597944 Simple_repeat Simple_repeat 585 chrUn_NT_464282v1 581 17585 GGXHOI 496 - 581 17585 0 15 2749,3111,690,2131,1274,273,484,145,638,145,727,881,690,1193,1502, 0,2763,5891,6603,8751,10039,10329,10835,11043,11703,11905,12667,13565,14277,15502, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 597947 Satellite W-chromosome 585 chrUn_NT_464282v1 18080 20312 GGERVL-A-int 798 + 18080 20312 0 3 1180,492,559, 0,1180,1673, +,+,+, 597949 LTR ERVL 585 chrUn_NT_464282v1 20298 22992 GGLTR3F1 954 + 20298 22992 0 2 2200,494, 0,2200, +,+, 597950 LTR ERVL 585 chrUn_NT_464282v1 23017 27841 GGXHOI 459 - 23017 27841 0 4 1221,2544,522,483, 0,1243,3803,4341, -,-,-,-, 597951 Satellite W-chromosome 585 chrUn_NT_464282v1 27912 32534 GGXHOI 443 - 27912 32534 0 7 352,771,273,2039,195,174,669, 0,374,1160,1450,3502,3733,3953, -,-,-,-,-,-,-, 597952 Satellite W-chromosome 585 chrUn_NT_464283v1 5436 6478 GGXHOI 554 - 5436 6478 0 2 494,360, 0,682, -,-, 597958 Satellite W-chromosome 585 chrUn_NT_464283v1 11658 12188 GGXHOI 610 - 11658 12188 0 2 366,153, 0,377, -,-, 597964 Satellite W-chromosome 585 chrUn_NT_464283v1 17323 18367 GGXHOI 582 - 17323 18367 0 2 227,592, 0,452, -,-, 597968 Satellite W-chromosome 585 chrUn_NT_464283v1 21277 25350 GGXHOI 558 - 21277 25350 0 3 1192,2219,388, 0,1416,3685, -,-,-, 597972 Satellite W-chromosome 585 chrUn_NT_464283v1 26418 27606 GGXHOI 525 - 26418 27606 0 2 534,641, 0,547, -,-, 597975 Satellite W-chromosome 585 chrUn_NT_464283v1 27813 28166 GGXHOI 507 - 27813 28166 0 2 137,159, 0,194, -,-, 597976 Satellite W-chromosome 585 chrUn_NT_464284v1 10779 19443 GGXHOI 578 + 10779 19443 0 5 654,28,158,86,1713, 0,890,5274,5451,6951, +,+,+,+,+, 597996 Satellite W-chromosome 585 chrUn_NT_464284v1 17941 29833 Sat-CR1_GG 168 + 17941 29833 0 5 1546,43,49,60,1639, 0,4289,4499,6677,10253, +,+,+,+,+, 598000 Satellite Satellite 585 chrUn_NT_464284v1 24678 28194 GGXHOI 578 + 24678 28194 0 3 1325,1216,392, 0,1617,3124, +,+,+, 598004 Satellite W-chromosome 585 chrUn_NT_464285v1 6464 7953 GGXHOI 335 - 6464 7953 0 3 135,568,754, 0,153,735, -,-,-, 598013 Satellite W-chromosome 585 chrUn_NT_464285v1 8202 9273 GGXHOI 366 - 8202 9273 0 3 582,193,235, 0,619,836, -,-,-, 598014 Satellite W-chromosome 585 chrUn_NT_464285v1 10445 17102 GGXHOI 390 - 10445 17102 0 8 88,1985,476,351,149,1830,1390,218, 0,101,2102,2594,3003,3168,5010,6439, -,-,-,-,-,-,-,-, 598017 Satellite W-chromosome 585 chrUn_NT_464285v1 17348 17637 GGXHOI 365 - 17348 17637 0 2 136,96, 0,193, -,-, 598018 Satellite W-chromosome 585 chrUn_NT_464285v1 17792 19208 GGXHOI 352 - 17792 19208 0 2 661,739, 0,677, -,-, 598019 Satellite W-chromosome 585 chrUn_NT_464285v1 22865 27235 GGXHOI 353 - 22865 27235 0 6 1770,149,265,131,710,1219, 0,1787,1978,2265,2413,3151, -,-,-,-,-,-, 598021 Satellite W-chromosome 585 chrUn_NT_464285v1 27449 29931 GGXHOI 339 - 27449 29931 0 4 615,296,1291,211, 0,630,937,2271, -,-,-,-, 598022 Satellite W-chromosome 585 chrUn_NT_464285v1 30045 32445 GGXHOI 372 - 30045 32445 0 3 887,853,581, 0,944,1819, -,-,-, 598023 Satellite W-chromosome 585 chrUn_NT_464286v1 1718 2712 GGXHOI 331 - 1718 2712 0 3 480,263,189, 0,522,805, -,-,-, 598026 Satellite W-chromosome 585 chrUn_NT_464286v1 5168 6006 GGXHOI 310 - 5168 6006 0 2 610,186, 0,652, -,-, 598030 Satellite W-chromosome 585 chrUn_NT_464286v1 6646 8507 GGXHOI 331 - 6646 8507 0 2 1081,738, 0,1123, -,-, 598031 Satellite W-chromosome 585 chrUn_NT_464286v1 12996 15116 GGXHOI 357 - 12996 15116 0 2 270,1832, 0,288, -,-, 598035 Satellite W-chromosome 585 chrUn_NT_464286v1 15568 17461 GGXHOI 349 - 15568 17461 0 2 1291,574, 0,1319, -,-, 598036 Satellite W-chromosome 585 chrUn_NT_464286v1 19166 22931 GGXHOI 364 - 19166 22931 0 2 2105,1642, 0,2123, -,-, 598038 Satellite W-chromosome 585 chrUn_NT_464286v1 29294 31485 GGXHOI 330 - 29294 31485 0 2 996,1132, 0,1059, -,-, 598045 Satellite W-chromosome 585 chrUn_NT_464287v1 1604 3640 GGXHOI 375 - 1604 3640 0 3 667,336,985, 0,688,1051, -,-,-, 598049 Satellite W-chromosome 585 chrUn_NT_464287v1 3771 10300 GGXHOI 398 - 3771 10300 0 4 971,2250,1095,2074, 0,1033,3310,4455, -,-,-,-, 598050 Satellite W-chromosome 585 chrUn_NT_464287v1 14152 17811 GGXHOI 397 - 14152 17811 0 4 914,723,1456,515, 0,928,1674,3144, -,-,-,-, 598057 Satellite W-chromosome 585 chrUn_NT_464287v1 17898 20614 GGXHOI 399 - 17898 20614 0 4 281,233,837,1231, 0,302,591,1485, -,-,-,-, 598058 Satellite W-chromosome 585 chrUn_NT_464287v1 21627 23844 GGXHOI 424 - 21627 23844 0 2 603,1599, 0,618, -,-, 598060 Satellite W-chromosome 585 chrUn_NT_464287v1 29616 32344 GGXHOI 415 - 29616 32344 0 3 861,1354,435, 0,876,2293, -,-,-, 598065 Satellite W-chromosome 585 chrUn_NT_464288v1 15756 17027 CR1-H 578 + 15756 17027 0 2 1158,113, 0,1158, +,+, 598078 LINE CR1 585 chrUn_NT_464288v1 18996 19617 CR1-H 675 + 18996 19617 0 2 477,138, 0,483, +,+, 598082 LINE CR1 585 chrUn_NT_464291v1 3827 6933 GGLTR7-int 414 + 3827 6933 0 4 116,1622,949,277, 0,116,1833,2829, +,+,+,+, 598101 LTR ERV1 585 chrUn_NT_464291v1 17007 20106 GGLTR7-int 423 + 17007 20106 0 4 106,1625,949,324, 0,106,1826,2775, +,+,+,+, 598113 LTR ERV1 585 chrUn_NT_464291v1 28719 31790 GGLTR7-int 436 + 28719 31790 0 5 116,41,451,943,274, 0,116,1262,1807,2797, +,+,+,+,+, 598123 LTR ERV1 585 chrUn_NT_464292v1 2676 17195 GGXHOI 437 + 2676 17195 0 22 305,1521,1479,187,353,1357,519,989,519,986,64,1319,64,434,360,943,64,612,1013,64,428,533, 0,320,1856,3350,3550,3916,5288,5820,6824,7356,8357,8441,9775,9859,10306,10679,11679,11763,12391,13461,13545,13986, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 598126 Satellite W-chromosome 585 chrUn_NT_464292v1 17222 23440 GGXHOI 433 + 17222 23440 0 8 362,519,1039,946,519,612,411,1673, 0,377,909,1968,2929,3461,4113,4545, +,+,+,+,+,+,+,+, 598128 Satellite W-chromosome 585 chrUn_NT_464292v1 23533 30019 GGXHOI 436 + 23533 30019 0 8 292,64,1499,1312,64,436,981,1636, 0,349,433,1952,3321,3405,3854,4850, +,+,+,+,+,+,+,+, 598129 Satellite W-chromosome 585 chrUn_NT_464292v1 31271 32018 GGXHOI 389 + 31271 32018 0 2 489,230, 0,517, +,+, 598131 Satellite W-chromosome 585 chrUn_NT_464293v1 9396 10060 GGLTR11-int 505 + 9396 10060 0 2 125,227, 0,437, +,+, 598139 LTR ERV1 585 chrUn_NT_464294v1 1575 2550 (CCTCG)n 421 + 1575 2550 0 2 724,197, 0,778, +,+, 598161 Simple_repeat Simple_repeat 585 chrUn_NT_464294v1 3008 5437 GGERV10_LTR 838 + 3008 5437 0 2 37,39, 0,2390, +,+, 598164 LTR ERVL 585 chrUn_NT_464294v1 3046 5281 GGLTR10D-int 883 + 3046 5281 0 2 1868,364, 0,1871, +,+, 598165 LTR ERVK 585 chrUn_NT_464294v1 5449 7926 GGLTR7-int 575 - 5449 7926 0 2 797,341, 0,2136, -,-, 598166 LTR ERV1 585 chrUn_NT_464294v1 18023 19420 GGLTR7-int 330 - 18023 19420 0 3 280,259,101, 0,1035,1296, -,-,-, 598182 LTR ERV1 585 chrUn_NT_464294v1 20157 22878 GGERVL-B-int 725 - 20157 22878 0 4 916,1071,64,309, 0,916,1988,2412, -,-,-,-, 598185 LTR ERVL 585 chrUn_NT_464294v1 25226 25912 GGLTR7A 806 - 25226 25912 0 2 589,88, 0,598, -,-, 598189 LTR ERV1 585 chrUn_NT_464294v1 25910 29361 GGLTR7A 805 + 25910 29361 0 2 2861,589, 0,2862, +,+, 598190 LTR ERV1 585 chrUn_NT_464295v1 2412 5038 CR1-D 654 - 2412 5038 0 2 1554,1011, 0,1615, -,-, 598196 LINE CR1 585 chrUn_NT_464295v1 28342 28759 CR1-Y 748 + 28342 28759 0 2 34,383, 0,34, +,+, 598211 LINE CR1 585 chrUn_NT_464295v1 28759 29178 (GATATG)n 354 + 28759 29178 0 2 61,12, 0,407, +,+, 598212 Simple_repeat Simple_repeat 585 chrUn_NT_464296v1 738 1736 GGXHOI 363 - 738 1736 0 2 810,162, 0,836, -,-, 598218 Satellite W-chromosome 585 chrUn_NT_464296v1 2672 4367 GGXHOI 370 - 2672 4367 0 2 756,928, 0,767, -,-, 598221 Satellite W-chromosome 585 chrUn_NT_464296v1 5436 8344 GGXHOI 356 - 5436 8344 0 2 1785,1106, 0,1802, -,-, 598224 Satellite W-chromosome 585 chrUn_NT_464296v1 8729 16627 GGXHOI 374 - 8729 16627 0 5 1338,1473,1097,894,2920, 0,1400,2910,4023,4978, -,-,-,-,-, 598225 Satellite W-chromosome 585 chrUn_NT_464296v1 16745 21895 GGXHOI 371 - 16745 21895 0 2 3942,1191, 0,3959, -,-, 598226 Satellite W-chromosome 585 chrUn_NT_464296v1 22367 22839 GGXHOI 311 - 22367 22839 0 2 176,273, 0,199, -,-, 598228 Satellite W-chromosome 585 chrUn_NT_464296v1 25963 26682 (CCTTG)n 550 + 25963 26682 0 3 105,228,184, 0,291,535, +,+,+, 598239 Simple_repeat Simple_repeat 585 chrUn_NT_464296v1 26749 28099 (CCTTG)n 559 + 26749 28099 0 5 158,111,292,14,205, 0,345,472,951,1145, +,+,+,+,+, 598241 Simple_repeat Simple_repeat 585 chrUn_NT_464296v1 28523 29303 (CCTTG)n 628 + 28523 29303 0 3 387,9,172, 0,573,608, +,+,+, 598248 Simple_repeat Simple_repeat 585 chrUn_NT_464296v1 29397 30584 (CCTTG)n 607 + 29397 30584 0 4 198,365,161,120, 0,243,608,1067, +,+,+,+, 598251 Simple_repeat Simple_repeat 585 chrUn_NT_464296v1 30688 31882 (CCTTG)n 608 + 30688 31882 0 3 283,140,262, 0,624,932, +,+,+, 598254 Simple_repeat Simple_repeat 585 chrUn_NT_464298v1 21701 30985 GGXHOI 366 + 21701 30985 0 3 5259,3787,154, 0,5312,9130, +,+,+, 598261 Satellite W-chromosome 585 chrUn_NT_464299v1 190 2494 GGLTR7-int 607 - 190 2494 0 4 324,299,851,338, 0,349,656,1966, -,-,-,-, 598264 LTR ERV1 585 chrUn_NT_464299v1 6835 7667 G-rich 463 + 6835 7667 0 2 38,744, 0,88, +,+, 598268 Low_complexity Low_complexity 585 chrUn_NT_464300v1 806 1418 (CATTG)n 588 + 806 1418 0 2 402,210, 0,402, +,+, 598291 Simple_repeat Simple_repeat 585 chrUn_NT_464301v1 1782 3968 GGXHOI 582 + 1782 3968 0 3 271,367,976, 0,520,1210, +,+,+, 598332 Satellite W-chromosome 585 chrUn_NT_464301v1 4378 5423 GGXHOI 574 + 4378 5423 0 2 275,521, 0,524, +,+, 598336 Satellite W-chromosome 585 chrUn_NT_464301v1 5677 6546 GGXHOI 414 + 5677 6546 0 2 164,481, 0,388, +,+, 598338 Satellite W-chromosome 585 chrUn_NT_464301v1 6614 7832 GGXHOI 552 + 6614 7832 0 2 247,501, 0,717, +,+, 598340 Satellite W-chromosome 585 chrUn_NT_464301v1 7910 9114 GGXHOI 554 + 7910 9114 0 2 920,20, 0,1184, +,+, 598342 Satellite W-chromosome 585 chrUn_NT_464301v1 9947 10411 GGXHOI 594 + 9947 10411 0 2 125,27, 0,437, +,+, 598346 Satellite W-chromosome 585 chrUn_NT_464301v1 10483 11455 GGXHOI 586 + 10483 11455 0 3 212,193,210, 0,523,762, +,+,+, 598348 Satellite W-chromosome 585 chrUn_NT_464301v1 11370 11681 Sat-CR1_GG 172 + 11370 11681 0 2 126,22, 0,289, +,+, 598350 Satellite Satellite 585 chrUn_NT_464301v1 11776 17697 GGXHOI 540 + 11776 17697 0 9 277,191,125,985,986,368,321,369,314, 0,526,763,1201,2500,3801,4418,5027,5607, +,+,+,+,+,+,+,+,+, 598352 Satellite W-chromosome 585 chrUn_NT_464301v1 19364 20158 GGXHOI 552 + 19364 20158 0 2 273,205, 0,589, +,+, 598364 Satellite W-chromosome 585 chrUn_NT_464301v1 23079 24312 GGXHOI 498 + 23079 24312 0 2 803,26, 0,1207, +,+, 598370 Satellite W-chromosome 585 chrUn_NT_464301v1 24382 25485 GGXHOI 569 + 24382 25485 0 4 207,65,243,19, 0,425,527,1084, +,+,+,+, 598372 Satellite W-chromosome 585 chrUn_NT_464301v1 25561 26572 GGXHOI 564 + 25561 26572 0 2 782,23, 0,988, +,+, 598375 Satellite W-chromosome 585 chrUn_NT_464301v1 27134 27768 GGXHOI 550 + 27134 27768 0 2 492,116, 0,518, +,+, 598378 Satellite W-chromosome 585 chrUn_NT_464301v1 27846 29069 GGXHOI 551 + 27846 29069 0 3 725,155,16, 0,773,1207, +,+,+, 598379 Satellite W-chromosome 585 chrUn_NT_464301v1 29151 30363 GGXHOI 446 + 29151 30363 0 2 287,649, 0,563, +,+, 598381 Satellite W-chromosome 585 chrUn_NT_464301v1 30431 30879 GGXHOI 514 + 30431 30879 0 2 213,40, 0,408, +,+, 598383 Satellite W-chromosome 585 chrUn_NT_464302v1 10191 10776 GGLTR12B 722 - 10191 10776 0 2 401,184, 0,401, -,-, 598395 LTR ERVL 585 chrUn_NT_464303v1 30146 30250 CR1-C4 528 + 30146 30250 0 2 53,51, 0,53, +,+, 598434 LINE CR1 585 chrUn_NT_464304v1 7163 7448 (ACCCATTGGG)n 524 - 7163 7448 0 2 126,159, 0,126, -,-, 598448 Satellite Satellite 585 chrUn_NT_464304v1 8159 8710 (ACCCATAGGG)n 393 - 8159 8710 0 2 381,126, 0,425, -,-, 598451 Satellite Satellite 585 chrUn_NT_464304v1 18889 18944 (GCCTTCT)n 468 + 18889 18944 0 2 13,8, 0,47, +,+, 598467 Simple_repeat Simple_repeat 585 chrUn_NT_464305v1 27995 30078 GGLTR7-int 671 + 27995 30078 0 2 1856,149, 0,1934, +,+, 598498 LTR ERV1 585 chrUn_NT_464306v1 2425 4345 GGLTR7-int 642 - 2425 4345 0 4 33,74,656,525, 0,34,739,1395, -,-,-,-, 598503 LTR ERV1 585 chrUn_NT_464306v1 27974 30760 CR1-D2 659 - 27974 30760 0 3 589,1992,104, 0,687,2682, -,-,-, 598519 LINE CR1 585 chrUn_NT_464307v1 24585 26746 GGLTR7-int 612 + 24585 26746 0 3 332,846,530, 0,777,1631, +,+,+, 598544 LTR ERV1 585 chrUn_NT_464307v1 26799 29031 GGLTR10D-int 889 - 26799 29031 0 2 367,1862, 0,370, -,-, 598545 LTR ERVK 585 chrUn_NT_464307v1 29073 29939 (CGAGG)n 617 + 29073 29939 0 3 255,70,189, 0,578,677, +,+,+, 598547 Simple_repeat Simple_repeat 585 chrUn_NT_464307v1 29990 30431 (CGAGG)n 593 + 29990 30431 0 2 250,191, 0,250, +,+, 598550 Simple_repeat Simple_repeat 585 chrUn_NT_464307v1 30513 31112 (CGAGG)n 602 + 30513 31112 0 3 188,179,204, 0,216,395, +,+,+, 598552 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 505 1744 (CGAGG)n 498 + 505 1744 0 4 340,183,272,189, 0,373,733,1050, +,+,+,+, 598557 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 2159 3720 (CGAGG)n 545 + 2159 3720 0 3 264,487,378, 0,647,1183, +,+,+, 598560 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 3850 5127 (CGAGG)n 538 + 3850 5127 0 2 1060,33, 0,1244, +,+, 598564 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 5927 8670 (CGAGG)n 535 + 5927 8670 0 7 865,118,189,190,183,345,178, 0,1249,1543,1776,1981,2191,2565, +,+,+,+,+,+,+, 598569 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 8764 10569 (CGAGG)n 509 + 8764 10569 0 6 616,136,175,143,162,292, 0,636,783,987,1307,1513, +,+,+,+,+,+, 598574 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 11349 11662 (CGAGG)n 542 + 11349 11662 0 2 97,38, 0,275, +,+, 598578 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 12371 12783 (CGAGG)n 516 + 12371 12783 0 2 183,188, 0,224, +,+, 598584 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 13351 14255 (CGAGG)n 536 + 13351 14255 0 2 465,426, 0,478, +,+, 598588 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 14917 15450 (CGAGG)n 522 + 14917 15450 0 2 334,176, 0,357, +,+, 598590 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 15719 16577 (CCTCG)n 562 + 15719 16577 0 2 423,83, 0,775, +,+, 598593 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 16637 17459 (CCTCG)n 544 + 16637 17459 0 2 354,426, 0,396, +,+, 598596 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 17904 19383 (CCTCG)n 554 + 17904 19383 0 4 295,177,179,704, 0,342,561,775, +,+,+,+, 598598 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 21077 22712 (CCTCG)n 539 + 21077 22712 0 3 96,266,1060, 0,290,575, +,+,+, 598610 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 22837 24226 (CCTCG)n 472 + 22837 24226 0 4 176,230,324,559, 0,214,495,830, +,+,+,+, 598612 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 25164 25983 (CCTCG)n 543 + 25164 25983 0 2 512,286, 0,533, +,+, 598617 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 26255 26837 (CCTCG)n 499 + 26255 26837 0 2 180,354, 0,228, +,+, 598619 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 27496 30604 (CCTCG)n 520 + 27496 30604 0 10 226,45,151,374,488,409,182,277,183,357, 0,409,465,642,1042,1575,2004,2215,2548,2751, +,+,+,+,+,+,+,+,+,+, 598621 Simple_repeat Simple_repeat 585 chrUn_NT_464308v1 30722 31106 (CCTCG)n 504 + 30722 31106 0 2 176,181, 0,203, +,+, 598625 Simple_repeat Simple_repeat 585 chrUn_NT_464309v1 218 3949 GGXHOI 572 + 218 3949 0 3 359,97,202, 0,653,3529, +,+,+, 598627 Satellite W-chromosome 585 chrUn_NT_464309v1 3970 12651 GGXHOI 576 + 3970 12651 0 5 3120,1530,641,595,36, 0,3441,5293,6504,8645, +,+,+,+,+, 598631 Satellite W-chromosome 585 chrUn_NT_464309v1 12765 26238 GGXHOI 568 + 12765 26238 0 9 699,641,1347,641,2129,1286,393,141,1407, 0,1020,2231,3900,4831,7529,9385,10547,12066, +,+,+,+,+,+,+,+,+, 598635 Satellite W-chromosome 585 chrUn_NT_464309v1 13464 14996 Sat-CR1_GG 230 + 13464 14996 0 2 321,570, 0,962, +,+, 598636 Satellite Satellite 585 chrUn_NT_464309v1 16343 20294 Sat-CR1_GG 227 + 16343 20294 0 3 322,290,569, 0,963,3382, +,+,+, 598637 Satellite Satellite 585 chrUn_NT_464311v1 5887 6677 CR1-F 273 - 5887 6677 0 2 581,209, 0,581, -,-, 598662 LINE CR1 585 chrUn_NT_464311v1 16701 17332 CR1-C3 501 - 16701 17332 0 2 365,240, 0,391, -,-, 598675 LINE CR1 585 chrUn_NT_464312v1 753 3210 GGLTR7-int 589 - 753 3210 0 2 799,337, 0,2120, -,-, 598691 LTR ERV1 585 chrUn_NT_464312v1 6978 7611 G-rich 445 + 6978 7611 0 2 38,548, 0,85, +,+, 598696 Low_complexity Low_complexity 585 chrUn_NT_464313v1 17684 18331 GGLTR11-int 504 - 17684 18331 0 2 224,125, 0,522, -,-, 598724 LTR ERV1 585 chrUn_NT_464317v1 14876 27654 GGXHOI 379 - 14876 27654 0 4 2020,6600,650,3418, 0,2037,8682,9360, -,-,-,-, 598786 Satellite W-chromosome 585 chrUn_NT_464318v1 693 1358 (CAAGG)n 516 + 693 1358 0 2 238,238, 0,427, +,+, 598790 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 1663 2176 (CCTTG)n 506 + 1663 2176 0 2 283,188, 0,325, +,+, 598794 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 3236 4057 (CCTTG)n 514 + 3236 4057 0 3 286,261,127, 0,306,694, +,+,+, 598798 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 5423 5937 (CCTTG)n 500 + 5423 5937 0 2 260,127, 0,387, +,+, 598805 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 6998 7807 (CCTTG)n 526 + 6998 7807 0 3 286,261,115, 0,306,694, +,+,+, 598810 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 8089 8834 (CCTTG)n 509 + 8089 8834 0 3 238,204,271, 0,238,474, +,+,+, 598813 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 9360 9886 (CAGGC)n 394 + 9360 9886 0 2 177,83, 0,443, +,+, 598817 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 9814 10386 (CAAGG)n 480 + 9814 10386 0 3 201,163,179, 0,218,393, +,+,+, 598819 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 11148 11476 (CCTTG)n 466 + 11148 11476 0 2 124,19, 0,309, +,+, 598824 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 11829 13116 (CAAGG)n 496 + 11829 13116 0 5 352,182,188,227,25, 0,374,582,798,1262, +,+,+,+,+, 598828 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 13135 13983 (CCTTG)n 489 + 13135 13983 0 3 49,460,317, 0,71,531, +,+,+, 598830 Simple_repeat Simple_repeat 585 chrUn_NT_464318v1 14022 16178 GGXHOI 375 - 14022 16178 0 3 575,679,839, 0,617,1317, -,-,-, 598831 Satellite W-chromosome 585 chrUn_NT_464318v1 16646 17776 GGXHOI 374 - 16646 17776 0 3 269,475,311, 0,286,819, -,-,-, 598833 Satellite W-chromosome 585 chrUn_NT_464318v1 17956 18632 GGXHOI 358 - 17956 18632 0 2 390,269, 0,407, -,-, 598834 Satellite W-chromosome 585 chrUn_NT_464318v1 18977 20163 GGXHOI 331 - 18977 20163 0 2 350,793, 0,393, -,-, 598835 Satellite W-chromosome 585 chrUn_NT_464318v1 20471 21066 GGXHOI 346 - 20471 21066 0 2 309,269, 0,326, -,-, 598836 Satellite W-chromosome 585 chrUn_NT_464318v1 21411 22597 GGXHOI 333 - 21411 22597 0 2 350,793, 0,393, -,-, 598837 Satellite W-chromosome 585 chrUn_NT_464318v1 22905 23500 GGXHOI 353 - 22905 23500 0 2 268,269, 0,326, -,-, 598838 Satellite W-chromosome 585 chrUn_NT_464318v1 23845 29289 GGXHOI 421 - 23845 29289 0 2 1103,4324, 0,1120, -,-, 598839 Satellite W-chromosome 585 chrUn_NT_464319v1 2917 3752 (CAAGG)n 446 + 2917 3752 0 3 203,364,223, 0,223,612, +,+,+, 598848 Simple_repeat Simple_repeat 585 chrUn_NT_464319v1 6920 8839 GGXHOI 363 + 6920 8839 0 3 317,473,1010, 0,375,909, +,+,+, 598856 Satellite W-chromosome 585 chrUn_NT_464319v1 13418 14114 GGXHOI 346 + 13418 14114 0 2 290,381, 0,315, +,+, 598862 Satellite W-chromosome 585 chrUn_NT_464319v1 16009 17060 GGXHOI 392 + 16009 17060 0 2 472,516, 0,535, +,+, 598866 Satellite W-chromosome 585 chrUn_NT_464319v1 17159 18703 GGXHOI 386 + 17159 18703 0 2 472,1009, 0,535, +,+, 598867 Satellite W-chromosome 585 chrUn_NT_464319v1 23124 24107 (CCTTG)n 503 + 23124 24107 0 3 376,334,69, 0,404,914, +,+,+, 598876 Simple_repeat Simple_repeat 585 chrUn_NT_464319v1 24914 25539 (CAAGG)n 518 + 24914 25539 0 2 374,227, 0,398, +,+, 598882 Simple_repeat Simple_repeat 585 chrUn_NT_464319v1 25737 26203 (CCTTG)n 473 + 25737 26203 0 2 181,285, 0,181, +,+, 598883 Simple_repeat Simple_repeat 585 chrUn_NT_464319v1 26829 27182 (CCTTG)n 468 + 26829 27182 0 2 144,15, 0,338, +,+, 598886 Simple_repeat Simple_repeat 585 chrUn_NT_464319v1 28504 28912 (CCTTG)n 481 + 28504 28912 0 2 190,212, 0,196, +,+, 598894 Simple_repeat Simple_repeat 585 chrUn_NT_464319v1 29261 30056 (CAAGG)n 447 + 29261 30056 0 3 290,304,181, 0,290,614, +,+,+, 598896 Simple_repeat Simple_repeat 585 chrUn_NT_464320v1 8130 9449 GGXHOI 347 + 8130 9449 0 3 271,303,710, 0,290,609, +,+,+, 598900 Satellite W-chromosome 585 chrUn_NT_464320v1 9600 21905 GGXHOI 436 + 9600 21905 0 7 3457,1155,3509,187,1554,187,2132, 0,3480,4658,8190,8393,9970,10173, +,+,+,+,+,+,+, 598901 Satellite W-chromosome 585 chrUn_NT_464320v1 28301 29928 GGXHOI 345 + 28301 29928 0 3 125,536,934, 0,141,693, +,+,+, 598904 Satellite W-chromosome 585 chrUn_NT_464320v1 30049 30592 GGXHOI 324 + 30049 30592 0 3 133,134,200, 0,185,343, +,+,+, 598905 Satellite W-chromosome 585 chrUn_NT_464321v1 2487 3890 GGLTR7-int 306 + 2487 3890 0 3 101,311,288, 0,103,1115, +,+,+, 598908 LTR ERV1 585 chrUn_NT_464321v1 14599 15109 (CCTTG)n 572 + 14599 15109 0 2 306,21, 0,489, +,+, 598922 Simple_repeat Simple_repeat 585 chrUn_NT_464321v1 15902 16520 (GCCTG)n 508 + 15902 16520 0 2 174,408, 0,210, +,+, 598929 Simple_repeat Simple_repeat 585 chrUn_NT_464321v1 17821 18943 CR1-F2 788 + 17821 18943 0 2 651,465, 0,657, +,+, 598936 LINE CR1 585 chrUn_NT_464322v1 12867 15262 GGLTR7-int 317 + 12867 15262 0 3 414,1156,792, 0,439,1603, +,+,+, 598960 LTR ERV1 585 chrUn_NT_464322v1 15274 17678 GGERV10_LTR 894 - 15274 17678 0 2 38,37, 0,2367, -,-, 598963 LTR ERVL 585 chrUn_NT_464322v1 15439 17640 GGLTR10D-int 874 - 15439 17640 0 2 364,1834, 0,367, -,-, 598964 LTR ERVK 585 chrUn_NT_464322v1 17695 20098 (CGAGG)n 539 + 17695 20098 0 7 176,183,168,400,229,67,607, 0,187,393,561,1144,1710,1796, +,+,+,+,+,+,+, 598965 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 20432 21018 (CGAGG)n 514 + 20432 21018 0 3 182,183,183, 0,200,403, +,+,+, 598973 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 21127 21891 (CGAGG)n 562 + 21127 21891 0 2 554,176, 0,588, +,+, 598975 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 22081 22447 (CGAGG)n 507 + 22081 22447 0 2 189,160, 0,206, +,+, 598976 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 23601 24630 (CGAGG)n 558 + 23601 24630 0 2 837,174, 0,855, +,+, 598982 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 24732 25039 (CGAGG)n 544 + 24732 25039 0 2 99,28, 0,279, +,+, 598983 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 25278 26108 (CGAGG)n 557 + 25278 26108 0 3 178,363,89, 0,198,741, +,+,+, 598986 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 26660 27215 (CGAGG)n 565 + 26660 27215 0 2 263,273, 0,282, +,+, 598990 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 27484 28175 (CGAGG)n 528 + 27484 28175 0 2 325,362, 0,329, +,+, 598993 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 28288 29148 (CGAGG)n 535 + 28288 29148 0 3 202,88,361, 0,379,499, +,+,+, 598995 Simple_repeat Simple_repeat 585 chrUn_NT_464322v1 29222 30496 (CGAGG)n 533 + 29222 30496 0 4 227,206,176,407, 0,400,646,867, +,+,+,+, 598998 Simple_repeat Simple_repeat 585 chrUn_NT_464323v1 291 3359 GGXHOI 456 - 291 3359 0 4 667,311,264,1779, 0,679,1006,1289, -,-,-,-, 599002 Satellite W-chromosome 585 chrUn_NT_464323v1 3432 4205 GGXHOI 483 - 3432 4205 0 2 598,164, 0,609, -,-, 599003 Satellite W-chromosome 585 chrUn_NT_464323v1 4285 8752 GGXHOI 395 - 4285 8752 0 10 286,136,689,758,232,119,477,856,312,372, 0,339,501,1201,1976,2247,2401,2897,3765,4095, -,-,-,-,-,-,-,-,-,-, 599004 Satellite W-chromosome 585 chrUn_NT_464323v1 9860 11850 GGXHOI 395 - 9860 11850 0 6 735,390,100,255,184,223, 0,747,1158,1281,1553,1767, -,-,-,-,-,-, 599006 Satellite W-chromosome 585 chrUn_NT_464323v1 11977 13914 GGXHOI 412 - 11977 13914 0 4 501,743,414,194, 0,524,1285,1743, -,-,-,-, 599007 Satellite W-chromosome 585 chrUn_NT_464323v1 13999 16045 GGXHOI 379 - 13999 16045 0 3 711,1155,157, 0,722,1889, -,-,-, 599008 Satellite W-chromosome 585 chrUn_NT_464323v1 16229 17489 GGXHOI 389 - 16229 17489 0 3 95,725,409, 0,111,851, -,-,-, 599009 Satellite W-chromosome 585 chrUn_NT_464323v1 18305 24332 GGXHOI 423 - 18305 24332 0 3 1299,1968,2730, 0,1314,3297, -,-,-, 599011 Satellite W-chromosome 585 chrUn_NT_464323v1 24895 27138 GGXHOI 404 - 24895 27138 0 6 689,106,132,182,358,662, 0,720,853,1010,1211,1581, -,-,-,-,-,-, 599013 Satellite W-chromosome 585 chrUn_NT_464323v1 28405 30504 GGXHOI 411 - 28405 30504 0 4 669,665,388,303, 0,701,1396,1796, -,-,-,-, 599016 Satellite W-chromosome 585 chrUn_NT_464324v1 9488 22292 Charlie12_GGa 490 - 9488 22292 0 3 91,67,67, 0,6376,12737, -,-,-, 599027 DNA hAT-Charlie 585 chrUn_NT_464325v1 920 1958 GGLTR7-int 299 + 920 1958 0 3 101,259,245, 0,103,793, +,+,+, 599067 LTR ERV1 585 chrUn_NT_464325v1 15275 15713 (CCTTG)n 594 + 15275 15713 0 2 79,348, 0,90, +,+, 599082 Simple_repeat Simple_repeat 585 chrUn_NT_464325v1 17411 18198 (GCCTG)n 502 + 17411 18198 0 3 159,60,137, 0,343,650, +,+,+, 599092 Simple_repeat Simple_repeat 585 chrUn_NT_464325v1 20269 22914 GGERVL-B-int 609 + 20269 22914 0 2 1787,838, 0,1807, +,+, 599098 LTR ERVL 585 chrUn_NT_464325v1 23772 25000 GGLTR7-int 291 + 23772 25000 0 2 187,279, 0,949, +,+, 599100 LTR ERV1 585 chrUn_NT_464326v1 1074 3300 (CAAGG)n 580 + 1074 3300 0 9 129,61,118,209,150,52,278,19,102, 0,303,364,707,971,1300,1365,1822,2124, +,+,+,+,+,+,+,+,+, 599107 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 3378 4009 (CAAGG)n 574 + 3378 4009 0 3 192,224,32, 0,192,599, +,+,+, 599113 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 4093 4718 (CAAGG)n 543 + 4093 4718 0 2 180,386, 0,239, +,+, 599116 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 4794 5389 (CAAGG)n 437 + 4794 5389 0 2 369,198, 0,397, +,+, 599118 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 5478 6959 (CAAGG)n 573 + 5478 6959 0 4 581,190,217,138, 0,627,841,1343, +,+,+,+, 599120 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 7026 7606 (CAAGG)n 605 + 7026 7606 0 2 185,352, 0,228, +,+, 599123 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 7415 8149 (CAGGC)n 444 + 7415 8149 0 2 245,99, 0,635, +,+, 599124 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 8067 9711 (CAAGG)n 479 + 8067 9711 0 6 192,197,294,199,136,110, 0,209,461,789,1002,1534, +,+,+,+,+,+, 599127 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 9205 9601 (CAGGC)n 493 + 9205 9601 0 2 195,201, 0,195, +,+, 599128 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 9790 10451 (CAAGG)n 563 + 9790 10451 0 3 195,208,204, 0,206,457, +,+,+, 599130 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 10451 10867 (CAGGC)n 415 + 10451 10867 0 2 113,253, 0,163, +,+, 599131 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 10816 12444 (CAAGG)n 541 + 10816 12444 0 5 532,191,302,19,215, 0,592,836,1394,1413, +,+,+,+,+, 599132 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 12448 12566 (AGGCA)n 506 + 12448 12566 0 2 18,19, 0,99, +,+, 599134 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 12910 13644 (CAAGG)n 569 + 12910 13644 0 3 303,221,192, 0,303,542, +,+,+, 599139 Simple_repeat Simple_repeat 585 chrUn_NT_464326v1 13795 14377 (CAAGG)n 460 + 13795 14377 0 2 184,369, 0,213, +,+, 599141 Simple_repeat Simple_repeat 585 chrUn_NT_464328v1 1188 2675 GGXHOI 560 + 1188 2675 0 2 812,624, 0,863, +,+, 599175 Satellite W-chromosome 585 chrUn_NT_464328v1 2687 8192 GGXHOI 562 + 2687 8192 0 2 836,1399, 0,4106, +,+, 599177 Satellite W-chromosome 585 chrUn_NT_464328v1 8230 30483 GGXHOI 574 + 8230 30483 0 4 956,192,149,391, 0,2474,10952,21862, +,+,+,+, 599180 Satellite W-chromosome 585 chrUn_NT_464329v1 5237 5918 CR1-F2 456 + 5237 5918 0 3 62,90,68, 0,62,613, +,+,+, 599193 LINE CR1 585 chrUn_NT_464329v1 5560 5713 CR1-F2 485 + 5560 5713 0 2 74,62, 0,91, +,+, 599194 LINE CR1 585 chrUn_NT_464329v1 6051 6186 CR1-F2 462 + 6051 6186 0 2 68,66, 0,69, +,+, 599197 LINE CR1 585 chrUn_NT_464329v1 6237 7597 CR1-F2 486 + 6237 7597 0 4 77,1,55,53, 0,77,1129,1307, +,+,+,+, 599198 LINE CR1 585 chrUn_NT_464329v1 15871 16056 CR1-F0 468 - 15871 16056 0 2 91,94, 0,91, -,-, 599211 LINE CR1 585 chrUn_NT_464329v1 16037 16331 CR1-F2 487 - 16037 16331 0 4 84,56,57,57, 0,84,155,237, -,-,-,-, 599212 LINE CR1 585 chrUn_NT_464329v1 16331 17286 CR1-F0 422 - 16331 17286 0 4 31,57,75,205, 0,109,675,750, -,-,-,-, 599213 LINE CR1 585 chrUn_NT_464329v1 16522 17013 CR1-F2 446 - 16522 17013 0 6 80,87,78,78,56,86, 0,80,167,245,323,405, -,-,-,-,-,-, 599215 LINE CR1 585 chrUn_NT_464329v1 21737 21985 CR1-H2 512 - 21737 21985 0 2 11,66, 0,182, -,-, 599222 LINE CR1 585 chrUn_NT_464329v1 25970 27219 CR1-H2 415 + 25970 27219 0 3 160,20,66, 0,841,1183, +,+,+, 599230 LINE CR1 585 chrUn_NT_464329v1 26831 26984 CR1-Y2 636 + 26831 26984 0 2 49,71, 0,82, +,+, 599238 LINE CR1 585 chrUn_NT_464330v1 326 5023 CR1-D2 574 - 326 5023 0 2 570,807, 0,3890, -,-, 599246 LINE CR1 585 chrUn_NT_464330v1 1592 4230 CR1-D 687 - 1592 4230 0 3 1644,885,109, 0,1644,2529, -,-,-, 599248 LINE CR1 585 chrUn_NT_464330v1 5013 5258 Char12Mar1_GG 521 - 5013 5258 0 2 73,172, 0,73, -,-, 599249 DNA hAT-Charlie 585 chrUn_NT_464330v1 20803 21467 GGLTR11-int 409 + 20803 21467 0 2 125,317, 0,347, +,+, 599262 LTR ERV1 585 chrUn_NT_464331v1 2709 2958 (GCCCCACAGCT)n 369 + 2709 2958 0 2 105,109, 0,140, +,+, 599271 Satellite Satellite 585 chrUn_NT_464331v1 2997 3783 GGLTR11 170 - 2997 3783 0 2 326,200, 0,586, -,-, 599272 LTR ERV1 585 chrUn_NT_464331v1 14313 19249 CR1-D2 573 - 14313 19249 0 2 571,800, 0,4136, -,-, 599278 LINE CR1 585 chrUn_NT_464332v1 3229 7907 CR1-D2 575 + 3229 7907 0 2 800,572, 0,4106, +,+, 599289 LINE CR1 585 chrUn_NT_464332v1 4015 6639 CR1-D 671 + 4015 6639 0 3 111,886,1627, 0,111,997, +,+,+, 599290 LINE CR1 585 chrUn_NT_464333v1 12327 21779 GGXHOI 409 - 12327 21779 0 8 854,347,769,1584,61,831,3456,1439, 0,870,1233,2018,3617,3693,4540,8013, -,-,-,-,-,-,-,-, 599310 Satellite W-chromosome 585 chrUn_NT_464333v1 21895 23065 GGXHOI 387 - 21895 23065 0 5 63,132,259,345,311, 0,76,225,498,859, -,-,-,-,-, 599311 Satellite W-chromosome 585 chrUn_NT_464333v1 23461 25840 GGXHOI 363 - 23461 25840 0 2 622,1741, 0,638, -,-, 599312 Satellite W-chromosome 585 chrUn_NT_464333v1 26152 29195 GGXHOI 355 - 26152 29195 0 5 212,910,571,338,910, 0,231,1162,1778,2133, -,-,-,-,-, 599313 Satellite W-chromosome 585 chrUn_NT_464333v1 29754 30375 GGXHOI 327 - 29754 30375 0 2 449,152, 0,469, -,-, 599316 Satellite W-chromosome 585 chrUn_NT_464334v1 12575 30331 GGXHOI 411 - 12575 30331 0 5 4925,1084,323,7728,3606, 0,4945,6045,6386,14150, -,-,-,-,-, 599318 Satellite W-chromosome 585 chrUn_NT_464336v1 7514 9674 GGXHOI 430 - 7514 9674 0 3 1234,599,291, 0,1258,1869, -,-,-, 599372 Satellite W-chromosome 585 chrUn_NT_464336v1 9741 10653 GGXHOI 435 - 9741 10653 0 2 284,575, 0,337, -,-, 599373 Satellite W-chromosome 585 chrUn_NT_464336v1 13191 14543 GGXHOI 417 - 13191 14543 0 2 580,733, 0,619, -,-, 599377 Satellite W-chromosome 585 chrUn_NT_464336v1 14941 16585 GGXHOI 417 - 14941 16585 0 3 1010,264,311, 0,1051,1333, -,-,-, 599378 Satellite W-chromosome 585 chrUn_NT_464336v1 16762 18273 GGXHOI 394 - 16762 18273 0 2 806,648, 0,863, -,-, 599379 Satellite W-chromosome 585 chrUn_NT_464336v1 18495 19583 GGXHOI 426 - 18495 19583 0 2 527,505, 0,583, -,-, 599380 Satellite W-chromosome 585 chrUn_NT_464336v1 21260 23310 GGXHOI 423 - 21260 23310 0 2 886,1146, 0,904, -,-, 599382 Satellite W-chromosome 585 chrUn_NT_464336v1 23528 24910 GGXHOI 426 - 23528 24910 0 2 697,644, 0,738, -,-, 599383 Satellite W-chromosome 585 chrUn_NT_464336v1 27724 28567 GGXHOI 409 - 27724 28567 0 2 434,392, 0,451, -,-, 599388 Satellite W-chromosome 585 chrUn_NT_464337v1 1113 2738 GGXHOI 415 - 1113 2738 0 2 647,965, 0,660, -,-, 599392 Satellite W-chromosome 585 chrUn_NT_464337v1 2806 4790 GGXHOI 385 - 2806 4790 0 2 742,1190, 0,794, -,-, 599393 Satellite W-chromosome 585 chrUn_NT_464337v1 4855 5119 GGXHOI 401 - 4855 5119 0 2 146,107, 0,157, -,-, 599394 Satellite W-chromosome 585 chrUn_NT_464337v1 5434 6898 GGXHOI 357 - 5434 6898 0 4 432,526,276,161, 0,454,1010,1303, -,-,-,-, 599395 Satellite W-chromosome 585 chrUn_NT_464337v1 8693 9675 GGXHOI 314 - 8693 9675 0 2 140,780, 0,202, -,-, 599398 Satellite W-chromosome 585 chrUn_NT_464337v1 9737 10069 GGXHOI 345 - 9737 10069 0 2 157,152, 0,180, -,-, 599400 Satellite W-chromosome 585 chrUn_NT_464337v1 13132 13688 GGXHOI 319 - 13132 13688 0 2 187,351, 0,205, -,-, 599404 Satellite W-chromosome 585 chrUn_NT_464337v1 13900 15264 GGXHOI 420 - 13900 15264 0 2 1195,148, 0,1216, -,-, 599405 Satellite W-chromosome 585 chrUn_NT_464337v1 15403 18025 GGXHOI 380 - 15403 18025 0 5 178,595,767,544,412, 0,200,842,1642,2210, -,-,-,-,-, 599406 Satellite W-chromosome 585 chrUn_NT_464337v1 18108 19479 GGXHOI 354 - 18108 19479 0 3 396,177,746, 0,420,625, -,-,-, 599407 Satellite W-chromosome 585 chrUn_NT_464337v1 19626 20496 GGXHOI 370 - 19626 20496 0 3 436,143,215, 0,449,655, -,-,-, 599408 Satellite W-chromosome 585 chrUn_NT_464337v1 20700 21401 GGXHOI 328 - 20700 21401 0 2 354,285, 0,416, -,-, 599409 Satellite W-chromosome 585 chrUn_NT_464337v1 21860 23887 GGXHOI 394 - 21860 23887 0 4 615,972,147,247, 0,626,1619,1780, -,-,-,-, 599410 Satellite W-chromosome 585 chrUn_NT_464337v1 23969 25819 GGXHOI 421 - 23969 25819 0 3 482,146,1199, 0,494,651, -,-,-, 599411 Satellite W-chromosome 585 chrUn_NT_464337v1 25889 27518 GGXHOI 397 - 25889 27518 0 3 608,642,313, 0,660,1316, -,-,-, 599412 Satellite W-chromosome 585 chrUn_NT_464337v1 27618 30242 GGXHOI 373 - 27618 30242 0 3 320,1835,414, 0,354,2210, -,-,-, 599413 Satellite W-chromosome 585 chrUn_NT_464338v1 1769 5165 CR1-C4 418 + 1769 5165 0 2 940,238, 0,3158, +,+, 599417 LINE CR1 585 chrUn_NT_464338v1 10019 10403 CR1-C4 537 + 10019 10403 0 2 53,241, 0,143, +,+, 599424 LINE CR1 585 chrUn_NT_464338v1 15265 15649 CR1-C4 537 + 15265 15649 0 2 53,241, 0,143, +,+, 599428 LINE CR1 585 chrUn_NT_464338v1 20511 20895 CR1-C4 537 + 20511 20895 0 2 53,241, 0,143, +,+, 599432 LINE CR1 585 chrUn_NT_464338v1 25774 26638 CR1-C 873 + 25774 26638 0 2 447,417, 0,447, +,+, 599438 LINE CR1 585 chrUn_NT_464339v1 2937 3763 GGXHOI 399 - 2937 3763 0 3 220,127,427, 0,259,399, -,-,-, 599445 Satellite W-chromosome 585 chrUn_NT_464339v1 3863 5237 GGXHOI 372 - 3863 5237 0 2 985,376, 0,998, -,-, 599446 Satellite W-chromosome 585 chrUn_NT_464339v1 8222 17436 GGXHOI 370 - 8222 17436 0 7 974,525,182,1419,3089,1456,1430, 0,987,1529,1769,3208,6312,7784, -,-,-,-,-,-,-, 599449 Satellite W-chromosome 585 chrUn_NT_464339v1 19304 21299 GGXHOI 447 - 19304 21299 0 2 1342,638, 0,1357, -,-, 599453 Satellite W-chromosome 585 chrUn_NT_464339v1 21393 25793 GGXHOI 375 - 21393 25793 0 7 190,509,987,513,468,603,1039, 0,202,722,1722,2250,2729,3361, -,-,-,-,-,-,-, 599454 Satellite W-chromosome 585 chrUn_NT_464339v1 28030 29698 GGXHOI 414 - 28030 29698 0 2 510,1138, 0,530, -,-, 599457 Satellite W-chromosome 585 chrUn_NT_464340v1 16790 18550 GGERVL-A-int 750 + 16790 18550 0 2 457,1303, 0,457, +,+, 599471 LTR ERVL 585 chrUn_NT_464341v1 8199 9580 GGLTR7-int 323 - 8199 9580 0 3 278,258,100, 0,1021,1281, -,-,-, 599483 LTR ERV1 585 chrUn_NT_464341v1 10314 13024 GGERVL-B-int 763 - 10314 13024 0 2 2403,307, 0,2403, -,-, 599485 LTR ERVL 585 chrUn_NT_464341v1 15326 15707 (CAAGG)n 569 + 15326 15707 0 2 182,199, 0,182, +,+, 599490 Simple_repeat Simple_repeat 585 chrUn_NT_464341v1 17513 17827 (CAAGG)n 593 + 17513 17827 0 2 176,115, 0,199, +,+, 599501 Simple_repeat Simple_repeat 585 chrUn_NT_464341v1 23415 23957 G-rich 390 + 23415 23957 0 2 77,437, 0,105, +,+, 599506 Low_complexity Low_complexity 585 chrUn_NT_464342v1 543 2043 GGLTR7B 559 + 543 2043 0 2 886,117, 0,1383, +,+, 599512 LTR ERV1 585 chrUn_NT_464342v1 13170 13266 (TCCCACC)n 328 + 13170 13266 0 2 42,16, 0,80, +,+, 599526 Simple_repeat Simple_repeat 585 chrUn_NT_464342v1 23847 24946 GGERVL-A-int 91 - 23847 24946 0 2 436,393, 0,706, -,-, 599533 LTR ERVL 585 chrUn_NT_464343v1 1580 2978 GGXHOI 356 + 1580 2978 0 3 330,483,520, 0,351,878, +,+,+, 599542 Satellite W-chromosome 585 chrUn_NT_464343v1 3073 5810 GGXHOI 335 + 3073 5810 0 5 407,317,483,906,507, 0,429,770,1302,2230, +,+,+,+,+, 599543 Satellite W-chromosome 585 chrUn_NT_464343v1 6275 13773 GGXHOI 418 + 6275 13773 0 7 656,2868,443,991,975,497,964, 0,673,3558,4016,5022,6018,6534, +,+,+,+,+,+,+, 599544 Satellite W-chromosome 585 chrUn_NT_464343v1 13850 15174 GGXHOI 400 + 13850 15174 0 2 850,452, 0,872, +,+, 599545 Satellite W-chromosome 585 chrUn_NT_464343v1 15292 20446 GGXHOI 410 + 15292 20446 0 7 1416,973,440,443,454,685,582, 0,1436,2424,2881,3344,3844,4572, +,+,+,+,+,+,+, 599546 Satellite W-chromosome 585 chrUn_NT_464343v1 21026 21873 GGXHOI 409 + 21026 21873 0 2 398,405, 0,442, +,+, 599548 Satellite W-chromosome 585 chrUn_NT_464343v1 21958 24711 GGXHOI 385 + 21958 24711 0 4 1376,370,506,426, 0,1422,1805,2327, +,+,+,+, 599549 Satellite W-chromosome 585 chrUn_NT_464343v1 28474 29529 GGXHOI 375 + 28474 29529 0 3 179,421,372, 0,214,683, +,+,+, 599552 Satellite W-chromosome 585 chrUn_NT_464344v1 5811 6300 CR1-Y4 606 - 5811 6300 0 2 289,195, 0,294, -,-, 599558 LINE CR1 585 chrUn_NT_464344v1 28603 30074 GGLTR3F1 774 + 28603 30074 0 3 223,82,991, 0,396,480, +,+,+, 599577 LTR ERVL 585 chrUn_NT_464345v1 175 916 (CGAGG)n 526 + 175 916 0 3 196,182,294, 0,211,447, +,+,+, 599581 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 966 3225 (CGAGG)n 552 + 966 3225 0 4 439,1157,80,179, 0,631,1961,2080, +,+,+,+, 599583 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 3852 5148 (CGAGG)n 566 + 3852 5148 0 3 571,337,177, 0,751,1119, +,+,+, 599590 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 5220 6160 (CGAGG)n 564 + 5220 6160 0 2 213,703, 0,237, +,+, 599592 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 6182 8637 (CGAGG)n 544 + 6182 8637 0 5 349,892,706,21,80, 0,355,1297,2174,2375, +,+,+,+,+, 599594 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 9753 10445 (CGAGG)n 562 + 9753 10445 0 2 470,180, 0,512, +,+, 599601 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 10514 13187 (CGAGG)n 527 + 10514 13187 0 8 193,354,285,175,27,291,537,178, 0,232,611,940,1411,1618,1928,2495, +,+,+,+,+,+,+,+, 599602 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 13405 14775 (CGAGG)n 549 + 13405 14775 0 3 179,179,968, 0,199,402, +,+,+, 599607 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 15688 16105 (CGAGG)n 559 + 15688 16105 0 2 179,183, 0,234, +,+, 599610 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 16444 17295 (CGAGG)n 554 + 16444 17295 0 2 326,493, 0,358, +,+, 599614 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 17382 18200 (CGAGG)n 563 + 17382 18200 0 4 180,177,201,230, 0,205,387,588, +,+,+,+, 599615 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 18201 19102 (CCTCG)n 592 + 18201 19102 0 2 333,568, 0,333, +,+, 599616 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 19362 20038 (CCTCG)n 588 + 19362 20038 0 3 161,33,91, 0,339,585, +,+,+, 599621 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 20051 21445 (CCTCG)n 575 + 20051 21445 0 3 301,343,466, 0,570,928, +,+,+, 599625 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 21519 22045 (CCTCG)n 562 + 21519 22045 0 2 222,72, 0,454, +,+, 599628 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 23512 24277 (CCTTG)n 460 + 23512 24277 0 3 141,13,58, 0,517,707, +,+,+, 599639 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 24232 24664 (CCTCG)n 574 + 24232 24664 0 2 181,226, 0,206, +,+, 599642 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 24759 25414 (CCTCG)n 591 + 24759 25414 0 2 179,461, 0,194, +,+, 599644 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 25488 26082 (CCTCG)n 567 + 25488 26082 0 2 183,371, 0,223, +,+, 599646 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 26104 26556 (CCTCG)n 557 + 26104 26556 0 2 185,267, 0,185, +,+, 599648 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 26614 27095 (CCTCG)n 578 + 26614 27095 0 2 166,168, 0,313, +,+, 599650 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 27516 28282 (CCTTG)n 460 + 27516 28282 0 2 141,249, 0,517, +,+, 599656 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 28046 28672 (CCTCG)n 588 + 28046 28672 0 2 352,41, 0,585, +,+, 599658 Simple_repeat Simple_repeat 585 chrUn_NT_464345v1 28771 29545 (CCTCG)n 484 + 28771 29545 0 3 223,140,190, 0,403,584, +,+,+, 599661 Simple_repeat Simple_repeat 585 chrUn_NT_464347v1 13115 13437 CR1-X2 399 - 13115 13437 0 2 79,226, 0,96, -,-, 599747 LINE CR1 585 chrUn_NT_464347v1 16281 17189 GGERVL-A-int 174 + 16281 17189 0 2 531,242, 0,666, +,+, 599755 LTR ERVL 585 chrUn_NT_464347v1 17392 18263 CR1-D2 657 + 17392 18263 0 2 772,53, 0,818, +,+, 599757 LINE CR1 585 chrUn_NT_464347v1 22667 24039 CR1-D2 645 - 22667 24039 0 2 423,623, 0,749, -,-, 599761 LINE CR1 585 chrUn_NT_464348v1 831 1956 CR1-B2 677 - 831 1956 0 2 898,224, 0,901, -,-, 599772 LINE CR1 585 chrUn_NT_464348v1 18998 20122 CR1-B2 705 - 18998 20122 0 2 896,225, 0,899, -,-, 599790 LINE CR1 585 chrUn_NT_464348v1 25487 25796 CR1-X 543 - 25487 25796 0 3 50,78,171, 0,60,138, -,-,-, 599794 LINE CR1 585 chrUn_NT_464349v1 10422 10538 (T)n 745 + 10422 10538 0 2 61,24, 0,92, +,+, 599804 Simple_repeat Simple_repeat 585 chrUn_NT_464349v1 28600 28679 (C)n 1000 + 28600 28679 0 2 17,18, 0,61, +,+, 599833 Simple_repeat Simple_repeat 585 chrUn_NT_464350v1 2317 3576 GGLTR7-int 240 + 2317 3576 0 2 258,285, 0,974, +,+, 599838 LTR ERV1 585 chrUn_NT_464350v1 12350 13244 CR1-F0 882 - 12350 13244 0 2 145,749, 0,145, -,-, 599849 LINE CR1 585 chrUn_NT_464350v1 13264 14287 (CCTTG)n 584 + 13264 14287 0 2 133,210, 0,813, +,+, 599850 Simple_repeat Simple_repeat 585 chrUn_NT_464350v1 14910 15494 (GCCTG)n 537 + 14910 15494 0 3 179,147,90, 0,179,494, +,+,+, 599859 Simple_repeat Simple_repeat 585 chrUn_NT_464350v1 16420 16582 (TGCC)n 364 + 16420 16582 0 3 26,7,49, 0,81,113, +,+,+, 599867 Simple_repeat Simple_repeat 585 chrUn_NT_464350v1 18651 21392 GGERVL-B-int 713 + 18651 21392 0 2 1828,913, 0,1828, +,+, 599873 LTR ERVL 585 chrUn_NT_464350v1 22128 23524 GGLTR7-int 317 + 22128 23524 0 3 100,314,280, 0,102,1116, +,+,+, 599875 LTR ERV1 585 chrUn_NT_464351v1 2527 7801 CR1-F2 560 + 2527 7801 0 2 284,367, 0,4907, +,+, 599888 LINE CR1 585 chrUn_NT_464351v1 9529 10814 GGLTR5B 555 - 9529 10814 0 2 371,139, 0,1146, -,-, 599892 LTR ERVL 585 chrUn_NT_464351v1 9900 10401 GGLTR3F2 822 - 9900 10401 0 2 229,232, 0,269, -,-, 599893 LTR ERVL 585 chrUn_NT_464351v1 11747 12999 GGERVL18-LTR 712 + 11747 12999 0 2 921,331, 0,921, +,+, 599897 LTR ERVL 585 chrUn_NT_464351v1 13017 15302 GGERVL18-int 743 + 13017 15302 0 3 816,1120,344, 0,816,1941, +,+,+, 599898 LTR ERVL 585 chrUn_NT_464351v1 16053 16483 CR1-Y 814 + 16053 16483 0 2 208,222, 0,208, +,+, 599900 LINE CR1 585 chrUn_NT_464351v1 21353 23863 GGERV20_I-int 364 - 21353 23863 0 3 366,483,302, 0,950,2208, -,-,-, 599902 LTR ERVL 585 chrUn_NT_464351v1 24477 27965 CR1-D 776 - 24477 27965 0 2 2549,476, 0,3012, -,-, 599905 LINE CR1 585 chrUn_NT_464351v1 28956 29718 GGLTR3F1 659 + 28956 29718 0 2 464,293, 0,469, +,+, 599908 LTR ERVL 585 chrUn_NT_464352v1 936 2115 GGLTR7A 893 - 936 2115 0 2 943,223, 0,956, -,-, 599910 LTR ERV1 585 chrUn_NT_464352v1 6219 6588 GGLTR7B 346 - 6219 6588 0 2 252,115, 0,254, -,-, 599914 LTR ERV1 585 chrUn_NT_464352v1 7029 13177 CR1-F 652 - 7029 13177 0 3 984,54,374, 0,5709,5774, -,-,-, 599915 LINE CR1 585 chrUn_NT_464352v1 8014 12738 GGERVL18-LTR 781 - 8014 12738 0 2 164,112, 0,4612, -,-, 599916 LTR ERVL 585 chrUn_NT_464352v1 13960 16525 GGERV20_I-int 530 + 13960 16525 0 2 431,82, 0,2483, +,+, 599920 LTR ERVL 585 chrUn_NT_464352v1 17054 17369 GGERV10_LTR 874 - 17054 17369 0 2 159,62, 0,253, -,-, 599928 LTR ERVL 585 chrUn_NT_464352v1 17368 21039 GGLTR11-int 748 - 17368 21039 0 3 462,729,1927, 0,462,1744, -,-,-, 599929 LTR ERV1 585 chrUn_NT_464352v1 21032 23413 GGERVL-A-int 738 - 21032 23413 0 4 155,1572,140,509, 0,155,1732,1872, -,-,-,-, 599931 LTR ERVL 585 chrUn_NT_464352v1 23415 27956 GGLTR11-int 806 - 23415 27956 0 4 1673,451,1565,150, 0,2370,2825,4391, -,-,-,-, 599932 LTR ERV1 585 chrUn_NT_464352v1 27952 29556 GGERVL18-int 563 - 27952 29556 0 2 880,723, 0,881, -,-, 599934 LTR ERVL 585 chrUn_NT_464353v1 10410 11484 (CCTTG)n 586 + 10410 11484 0 4 174,122,30,210, 0,355,655,864, +,+,+,+, 599949 Simple_repeat Simple_repeat 585 chrUn_NT_464353v1 12103 12756 (GCCTG)n 498 + 12103 12756 0 2 126,274, 0,379, +,+, 599958 Simple_repeat Simple_repeat 585 chrUn_NT_464353v1 16235 18725 GGERVL-B-int 784 + 16235 18725 0 3 320,1257,913, 0,320,1577, +,+,+, 599969 LTR ERVL 585 chrUn_NT_464353v1 19459 20851 GGLTR7-int 313 + 19459 20851 0 3 100,287,280, 0,126,1112, +,+,+, 599972 LTR ERV1 585 chrUn_NT_464354v1 370 930 GGXHOI 337 - 370 930 0 2 275,271, 0,289, -,-, 599983 Satellite W-chromosome 585 chrUn_NT_464354v1 2586 4167 GGXHOI 370 - 2586 4167 0 2 843,676, 0,905, -,-, 599985 Satellite W-chromosome 585 chrUn_NT_464354v1 4266 6309 GGXHOI 371 - 4266 6309 0 3 583,641,781, 0,605,1262, -,-,-, 599986 Satellite W-chromosome 585 chrUn_NT_464354v1 6515 8155 GGXHOI 377 - 6515 8155 0 2 614,984, 0,656, -,-, 599987 Satellite W-chromosome 585 chrUn_NT_464354v1 8361 10001 GGXHOI 377 - 8361 10001 0 2 614,984, 0,656, -,-, 599988 Satellite W-chromosome 585 chrUn_NT_464354v1 10207 11849 GGXHOI 377 - 10207 11849 0 2 616,984, 0,658, -,-, 599989 Satellite W-chromosome 585 chrUn_NT_464354v1 12055 17427 GGXHOI 384 - 12055 17427 0 6 614,269,393,1786,886,1190, 0,656,943,1394,3238,4182, -,-,-,-,-,-, 599990 Satellite W-chromosome 585 chrUn_NT_464354v1 18740 20807 GGXHOI 377 - 18740 20807 0 3 583,641,805, 0,605,1262, -,-,-, 599993 Satellite W-chromosome 585 chrUn_NT_464354v1 20989 22651 GGXHOI 378 - 20989 22651 0 2 614,1006, 0,656, -,-, 599994 Satellite W-chromosome 585 chrUn_NT_464354v1 23523 25403 GGXHOI 366 - 23523 25403 0 2 616,1206, 0,674, -,-, 599996 Satellite W-chromosome 585 chrUn_NT_464354v1 25580 27879 GGXHOI 370 - 25580 27879 0 3 394,474,1355, 0,452,944, -,-,-, 599997 Satellite W-chromosome 585 chrUn_NT_464354v1 28767 29657 GGXHOI 313 - 28767 29657 0 3 467,214,152, 0,484,738, -,-,-, 600000 Satellite W-chromosome 585 chrUn_NT_464355v1 1494 1885 (CAT)n 721 + 1494 1885 0 2 181,210, 0,181, +,+, 600006 Simple_repeat Simple_repeat 585 chrUn_NT_464355v1 4968 5232 (ACCCCATAGGG)n 331 - 4968 5232 0 2 104,101, 0,163, -,-, 600008 Satellite Satellite 585 chrUn_NT_464355v1 10147 10725 (CCCTAA)n 624 + 10147 10725 0 2 184,62, 0,516, +,+, 600013 Simple_repeat Simple_repeat 585 chrUn_NT_464355v1 11193 11747 (CCCTAA)n 438 + 11193 11747 0 2 180,356, 0,198, +,+, 600018 Simple_repeat Simple_repeat 585 chrUn_NT_464356v1 217 600 (CCCTAA)n 626 + 217 600 0 2 173,191, 0,192, +,+, 600031 Simple_repeat Simple_repeat 585 chrUn_NT_464356v1 1361 2581 (CCCTAA)n 472 + 1361 2581 0 3 362,589,191, 0,412,1029, +,+,+, 600034 Simple_repeat Simple_repeat 585 chrUn_NT_464356v1 2652 3071 (CCCTAA)n 514 + 2652 3071 0 2 186,189, 0,230, +,+, 600035 Simple_repeat Simple_repeat 585 chrUn_NT_464357v1 2512 3717 CR1-D2 723 - 2512 3717 0 2 430,437, 0,768, -,-, 600041 LINE CR1 585 chrUn_NT_464359v1 6735 7192 CR1-H 677 + 6735 7192 0 2 296,161, 0,296, +,+, 600138 LINE CR1 585 chrUn_NT_464359v1 9993 10615 CR1-H 683 + 9993 10615 0 2 477,139, 0,483, +,+, 600142 LINE CR1 585 chrUn_NT_464359v1 20904 21361 CR1-H 677 + 20904 21361 0 2 296,161, 0,296, +,+, 600152 LINE CR1 585 chrUn_NT_464359v1 24729 25352 CR1-H 685 + 24729 25352 0 2 478,139, 0,484, +,+, 600156 LINE CR1 585 chrUn_NT_464360v1 2762 3349 GGLTR7-int 757 - 2762 3349 0 3 92,278,217, 0,92,370, -,-,-, 600165 LTR ERV1 585 chrUn_NT_464360v1 3728 4101 GGERVK10-int 375 - 3728 4101 0 2 81,133, 0,240, -,-, 600166 LTR ERVK 585 chrUn_NT_464360v1 4630 9179 GGERV28_I-int 878 - 4630 9179 0 3 868,3204,477, 0,868,4072, -,-,-, 600169 LTR ERVK 585 chrUn_NT_464360v1 9179 12879 GGERVL-B-int 800 - 9179 12879 0 3 1279,1594,564, 0,1540,3136, -,-,-, 600170 LTR ERVL 585 chrUn_NT_464360v1 14096 15505 GGLTR3B4 508 + 14096 15505 0 2 413,996, 0,413, +,+, 600173 LTR ERVL 585 chrUn_NT_464360v1 16914 22517 GGERVL18-int 785 - 16914 22517 0 3 1761,2957,332, 0,2314,5271, -,-,-, 600175 LTR ERVL 585 chrUn_NT_464361v1 440 912 (GCCTG)n 492 + 440 912 0 2 199,92, 0,380, +,+, 600182 Simple_repeat Simple_repeat 585 chrUn_NT_464361v1 908 1333 GGLTR7A 874 + 908 1333 0 2 174,251, 0,174, +,+, 600184 LTR ERV1 585 chrUn_NT_464361v1 1857 2888 GGLTR7A 771 + 1857 2888 0 2 459,572, 0,459, +,+, 600186 LTR ERV1 585 chrUn_NT_464361v1 5225 7866 GGERVL-B-int 744 + 5225 7866 0 2 314,2327, 0,314, +,+, 600190 LTR ERVL 585 chrUn_NT_464361v1 8587 9971 GGLTR7-int 305 + 8587 9971 0 3 99,255,279, 0,101,1105, +,+,+, 600193 LTR ERV1 585 chrUn_NT_464361v1 13665 13832 A-rich 489 + 13665 13832 0 2 98,34, 0,133, +,+, 600197 Low_complexity Low_complexity 585 chrUn_NT_464361v1 25105 25757 (GCCTG)n 511 + 25105 25757 0 3 126,186,197, 0,269,455, +,+,+, 600223 Simple_repeat Simple_repeat 585 chrUn_NT_464361v1 26044 26529 (GCCTG)n 540 + 26044 26529 0 2 276,23, 0,462, +,+, 600227 Simple_repeat Simple_repeat 585 chrUn_NT_464363v1 4102 5944 Sat-CR1_GG 202 + 4102 5944 0 3 634,478,243, 0,964,1599, +,+,+, 600246 Satellite Satellite 585 chrUn_NT_464363v1 6001 9938 Sat-CR1_GG 184 + 6001 9938 0 5 701,481,219,699,923, 0,1040,1700,1977,3014, +,+,+,+,+, 600250 Satellite Satellite 585 chrUn_NT_464363v1 9951 11791 Sat-CR1_GG 182 + 9951 11791 0 2 699,802, 0,1038, +,+, 600255 Satellite Satellite 585 chrUn_NT_464363v1 11929 15743 Sat-CR1_GG 175 + 11929 15743 0 4 701,879,700,800, 0,1039,1975,3014, +,+,+,+, 600258 Satellite Satellite 585 chrUn_NT_464363v1 15881 17845 Sat-CR1_GG 184 + 15881 17845 0 2 701,926, 0,1038, +,+, 600262 Satellite Satellite 585 chrUn_NT_464363v1 17910 19825 Sat-CR1_GG 190 + 17910 19825 0 2 649,928, 0,987, +,+, 600265 Satellite Satellite 585 chrUn_NT_464363v1 19889 20876 Sat-CR1_GG 232 + 19889 20876 0 2 648,11, 0,976, +,+, 600267 Satellite Satellite 585 chrUn_NT_464363v1 21119 21480 GGXHOI 299 + 21119 21480 0 2 149,201, 0,160, +,+, 600269 Satellite W-chromosome 585 chrUn_NT_464363v1 27736 28428 Sat-CR1_GG 232 + 27736 28428 0 2 265,266, 0,426, +,+, 600281 Satellite Satellite 585 chrUn_NT_464364v1 756 8305 GGLTR7A 808 + 756 8305 0 3 587,6374,588, 0,587,6961, +,+,+, 600286 LTR ERV1 585 chrUn_NT_464364v1 8591 10542 GGLTR7A 761 + 8591 10542 0 2 1367,584, 0,1367, +,+, 600288 LTR ERV1 585 chrUn_NT_464364v1 11709 12181 GGERVL18-int 521 - 11709 12181 0 2 344,128, 0,344, -,-, 600291 LTR ERVL 585 chrUn_NT_464364v1 12631 12705 GGERVL18-LTR 773 + 12631 12705 0 2 44,30, 0,44, +,+, 600293 LTR ERVL 585 chrUn_NT_464364v1 14641 16386 GGERVL-C-int 219 + 14641 16386 0 4 192,346,151,124, 0,516,1121,1621, +,+,+,+, 600297 LTR ERVL 585 chrUn_NT_464364v1 16500 21444 GGERVL-B-int 523 + 16500 21444 0 3 893,467,453, 0,893,4491, +,+,+, 600299 LTR ERVL 585 chrUn_NT_464364v1 17861 20969 GGERVL-B-int 820 - 17861 20969 0 4 577,86,1331,1113, 0,577,663,1995, -,-,-,-, 600300 LTR ERVL 585 chrUn_NT_464364v1 21870 27992 GGERVL-A-int 412 + 21870 27992 0 5 532,748,22,259,124, 0,532,2726,2780,5998, +,+,+,+,+, 600301 LTR ERVL 585 chrUn_NT_464364v1 28001 29168 GGERVL18-int 454 + 28001 29168 0 2 1080,87, 0,1080, +,+, 600306 LTR ERVL 585 chrUn_NT_464365v1 2383 5029 GGERVL18-int 527 + 2383 5029 0 2 1866,780, 0,1866, +,+, 600311 LTR ERVL 585 chrUn_NT_464365v1 6903 9509 GGERVL-C-int 673 - 6903 9509 0 2 532,2074, 0,532, -,-, 600315 LTR ERVL 585 chrUn_NT_464365v1 11118 11279 GGLTR3B4 551 - 11118 11279 0 2 74,87, 0,74, -,-, 600318 LTR ERVL 585 chrUn_NT_464365v1 13016 13177 GGLTR3B4 551 - 13016 13177 0 2 74,87, 0,74, -,-, 600322 LTR ERVL 585 chrUn_NT_464365v1 13514 16257 GGLTR5A 461 + 13514 16257 0 2 397,180, 0,2563, +,+, 600323 LTR ERVL 585 chrUn_NT_464365v1 17242 21079 GGERVL-B-int 301 + 17242 21079 0 5 531,151,557,1346,441, 0,587,926,1483,3396, +,+,+,+,+, 600326 LTR ERVL 585 chrUn_NT_464365v1 21543 29100 GGLTR7A 825 - 21543 29100 0 3 630,6371,555, 0,631,7002, -,-,-, 600332 LTR ERV1 585 chrUn_NT_464366v1 2757 3071 (CGAGG)n 520 + 2757 3071 0 2 95,36, 0,278, +,+, 600345 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 3405 4000 (CGAGG)n 583 + 3405 4000 0 2 179,360, 0,235, +,+, 600348 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 5506 6161 (CGAGG)n 534 + 5506 6161 0 2 466,176, 0,479, +,+, 600355 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 7692 7769 G-rich 236 + 7692 7769 0 2 32,21, 0,56, +,+, 600365 Low_complexity Low_complexity 585 chrUn_NT_464366v1 9307 10115 (CGAGG)n 530 + 9307 10115 0 2 250,377, 0,431, +,+, 600375 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 10613 10995 (CGAGG)n 489 + 10613 10995 0 2 179,178, 0,204, +,+, 600379 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 12480 13335 (CGAGG)n 530 + 12480 13335 0 2 236,445, 0,410, +,+, 600386 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 14255 14975 (CGAGG)n 484 + 14255 14975 0 2 275,269, 0,451, +,+, 600391 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 17236 17784 (CGAGG)n 539 + 17236 17784 0 2 184,303, 0,245, +,+, 600401 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 18115 20406 (CGAGG)n 525 + 18115 20406 0 7 481,217,187,260,189,15,282, 0,658,909,1122,1556,1943,2009, +,+,+,+,+,+,+, 600405 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 21572 21988 (CGAGG)n 580 + 21572 21988 0 2 177,178, 0,238, +,+, 600416 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 22014 22518 (CGAGG)n 499 + 22014 22518 0 2 352,141, 0,363, +,+, 600418 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 24056 24608 (CGAGG)n 517 + 24056 24608 0 3 138,180,177, 0,151,375, +,+,+, 600423 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 25723 26540 (CGAGG)n 533 + 25723 26540 0 2 626,178, 0,639, +,+, 600431 Simple_repeat Simple_repeat 585 chrUn_NT_464366v1 27259 27921 (CGAGG)n 457 + 27259 27921 0 3 346,91,191, 0,369,471, +,+,+, 600433 Simple_repeat Simple_repeat 585 chrUn_NT_464367v1 2771 4176 GGLTR7-int 269 - 2771 4176 0 3 275,319,101, 0,983,1304, -,-,-, 600439 LTR ERV1 585 chrUn_NT_464367v1 10504 11139 (CAGGC)n 432 + 10504 11139 0 2 226,221, 0,414, +,+, 600447 Simple_repeat Simple_repeat 585 chrUn_NT_464367v1 11719 12372 (CAGGC)n 470 + 11719 12372 0 2 229,65, 0,588, +,+, 600454 Simple_repeat Simple_repeat 585 chrUn_NT_464367v1 11948 12307 (CAAGG)n 322 + 11948 12307 0 2 156,203, 0,156, +,+, 600455 Simple_repeat Simple_repeat 585 chrUn_NT_464367v1 12752 13126 (CAAGG)n 647 + 12752 13126 0 2 176,180, 0,194, +,+, 600458 Simple_repeat Simple_repeat 585 chrUn_NT_464367v1 14026 14906 CR1-F0 817 + 14026 14906 0 2 745,135, 0,745, +,+, 600464 LINE CR1 585 chrUn_NT_464367v1 24806 26196 GGLTR7-int 323 - 24806 26196 0 3 280,260,101, 0,1027,1289, -,-,-, 600474 LTR ERV1 585 chrUn_NT_464368v1 249 2914 GGLTR10D-int 519 + 249 2914 0 2 2343,319, 0,2346, +,+, 600479 LTR ERVK 585 chrUn_NT_464368v1 3283 4211 (GAGTG)n 481 + 3283 4211 0 3 369,182,333, 0,392,595, +,+,+, 600480 Simple_repeat Simple_repeat 585 chrUn_NT_464368v1 4293 4950 (GAGTG)n 393 + 4293 4950 0 4 172,115,53,102, 0,190,487,555, +,+,+,+, 600482 Simple_repeat Simple_repeat 585 chrUn_NT_464368v1 6813 16124 GGERVL-B-int 819 - 6813 16124 0 5 485,1560,1209,2509,475, 0,485,2545,6325,8836, -,-,-,-,-, 600495 LTR ERVL 585 chrUn_NT_464368v1 23430 25804 GGLTR7-int 387 + 23430 25804 0 4 101,259,279,231, 0,103,1602,2143, +,+,+,+, 600500 LTR ERV1 585 chrUn_NT_464368v1 26007 29026 GGLTR7-int 552 + 26007 29026 0 3 164,190,96, 0,2638,2923, +,+,+, 600503 LTR ERV1 585 chrUn_NT_464368v1 26892 28621 GGLTR7-int 395 - 26892 28621 0 3 339,53,181, 0,508,1548, -,-,-, 600505 LTR ERV1 585 chrUn_NT_464371v1 735 4435 CR1-B2 540 - 735 4435 0 6 39,27,441,94,399,186, 0,248,275,1175,3115,3514, -,-,-,-,-,-, 600521 LINE CR1 585 chrUn_NT_464371v1 5346 9268 CR1-C 593 - 5346 9268 0 5 40,470,294,399,187, 0,257,1189,3336,3735, -,-,-,-,-, 600529 LINE CR1 585 chrUn_NT_464371v1 10181 14103 CR1-C 594 - 10181 14103 0 5 40,471,294,399,187, 0,257,1189,3336,3735, -,-,-,-,-, 600537 LINE CR1 585 chrUn_NT_464371v1 15016 18938 CR1-C2 648 - 15016 18938 0 5 260,468,294,399,186, 0,260,1190,3337,3736, -,-,-,-,-, 600545 LINE CR1 585 chrUn_NT_464371v1 19889 23729 CR1-C2 631 - 19889 23729 0 5 220,468,294,393,178, 0,220,1143,3269,3662, -,-,-,-,-, 600552 LINE CR1 585 chrUn_NT_464371v1 24640 28199 CR1-C 517 - 24640 28199 0 5 95,228,287,394,185, 0,250,944,2980,3374, -,-,-,-,-, 600558 LINE CR1 585 chrUn_NT_464372v1 4723 8572 Char12Mar1_GG 479 - 4723 8572 0 3 628,315,254, 0,1629,3595, -,-,-, 600568 DNA hAT-Charlie 585 chrUn_NT_464372v1 12838 16690 Char12Mar1_GG 483 - 12838 16690 0 3 627,314,254, 0,1630,3598, -,-,-, 600573 DNA hAT-Charlie 585 chrUn_NT_464372v1 22219 24809 Char12Mar1_GG 419 - 22219 24809 0 2 893,271, 0,2319, -,-, 600580 DNA hAT-Charlie 585 chrUn_NT_464372v1 23107 24544 CR1-E 578 + 23107 24544 0 2 676,761, 0,676, +,+, 600581 LINE CR1 585 chrUn_NT_464372v1 28481 28910 CR1-F 708 + 28481 28910 0 2 142,224, 0,205, +,+, 600583 LINE CR1 585 chrUn_NT_464373v1 25972 26470 GGLTR3F2 784 + 25972 26470 0 2 230,224, 0,274, +,+, 600603 LTR ERVL 585 chrUn_NT_464374v1 704 2830 (CCTCG)n 551 + 704 2830 0 5 471,367,757,178,177, 0,484,902,1716,1949, +,+,+,+,+, 600609 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 2899 4450 (CCTCG)n 524 + 2899 4450 0 5 310,205,439,351,176, 0,310,530,985,1375, +,+,+,+,+, 600611 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 4525 4956 (CCTCG)n 508 + 4525 4956 0 2 217,182, 0,249, +,+, 600612 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 5692 6242 (CCTCG)n 505 + 5692 6242 0 2 355,180, 0,370, +,+, 600618 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 6317 7023 (CCTCG)n 556 + 6317 7023 0 2 457,69, 0,637, +,+, 600619 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 7249 7633 (CCTCG)n 529 + 7249 7633 0 2 176,177, 0,207, +,+, 600623 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 9611 10079 (CCTCG)n 586 + 9611 10079 0 2 133,157, 0,311, +,+, 600634 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 10391 12157 (CCTCG)n 546 + 10391 12157 0 2 726,622, 0,1144, +,+, 600639 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 12990 13922 (CCTCG)n 512 + 12990 13922 0 2 316,602, 0,330, +,+, 600646 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 14590 17492 (CCTCG)n 544 + 14590 17492 0 6 179,321,57,179,984,752, 0,203,703,790,993,2150, +,+,+,+,+,+, 600650 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 17582 21377 (CCTCG)n 535 + 17582 21377 0 8 396,824,289,678,498,415,179,198, 0,408,1247,1581,2275,2952,3403,3597, +,+,+,+,+,+,+,+, 600654 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 21468 24065 (CCTCG)n 536 + 21468 24065 0 8 179,481,181,378,134,40,498,137, 0,208,719,925,1352,1669,1769,2460, +,+,+,+,+,+,+,+, 600657 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 24160 25593 (CCTCG)n 545 + 24160 25593 0 3 1003,180,186, 0,1022,1247, +,+,+, 600660 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 25757 26383 (CCTCG)n 528 + 25757 26383 0 2 411,31, 0,595, +,+, 600661 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 26447 26925 (CCTCG)n 465 + 26447 26925 0 2 177,290, 0,188, +,+, 600664 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 27569 27892 (CCTCG)n 534 + 27569 27892 0 2 92,53, 0,270, +,+, 600668 Simple_repeat Simple_repeat 585 chrUn_NT_464374v1 28406 28874 (CCTCG)n 456 + 28406 28874 0 2 191,266, 0,202, +,+, 600672 Simple_repeat Simple_repeat 585 chrUn_NT_464375v1 2060 6336 GGXHOI 339 - 2060 6336 0 3 2923,1226,96, 0,2938,4180, -,-,-, 600674 Satellite W-chromosome 585 chrUn_NT_464375v1 6446 9892 GGXHOI 364 - 6446 9892 0 3 1713,1117,585, 0,1732,2861, -,-,-, 600675 Satellite W-chromosome 585 chrUn_NT_464375v1 10238 19864 GGXHOI 389 - 10238 19864 0 5 602,2861,3060,1693,1309, 0,658,3536,6607,8317, -,-,-,-,-, 600676 Satellite W-chromosome 585 chrUn_NT_464375v1 19993 25045 GGXHOI 334 - 19993 25045 0 8 804,508,261,1369,93,709,913,171, 0,832,1359,1668,3055,3199,3923,4881, -,-,-,-,-,-,-,-, 600677 Satellite W-chromosome 585 chrUn_NT_464375v1 25201 25723 GGXHOI 370 - 25201 25723 0 2 374,128, 0,394, -,-, 600678 Satellite W-chromosome 585 chrUn_NT_464375v1 25923 28731 GGXHOI 371 - 25923 28731 0 2 283,2482, 0,326, -,-, 600679 Satellite W-chromosome 585 chrUn_NT_464376v1 843 2218 GGLTR7-int 339 + 843 2218 0 3 88,233,280, 0,115,1095, +,+,+, 600683 LTR ERV1 585 chrUn_NT_464376v1 14086 14625 (CCTTG)n 588 + 14086 14625 0 3 97,11,48, 0,307,491, +,+,+, 600700 Simple_repeat Simple_repeat 585 chrUn_NT_464376v1 16051 16479 GGLTR7A 877 + 16051 16479 0 2 174,254, 0,174, +,+, 600711 LTR ERV1 585 chrUn_NT_464376v1 17005 18076 GGLTR7A 840 + 17005 18076 0 2 463,608, 0,463, +,+, 600713 LTR ERV1 585 chrUn_NT_464376v1 20568 23425 GGERVL-B-int 694 + 20568 23425 0 2 1934,923, 0,1934, +,+, 600717 LTR ERVL 585 chrUn_NT_464376v1 24161 25557 GGLTR7-int 311 + 24161 25557 0 3 101,313,280, 0,103,1116, +,+,+, 600719 LTR ERV1 585 chrUn_NT_464377v1 20353 20841 CR1-Y4 620 + 20353 20841 0 2 195,288, 0,200, +,+, 600742 LINE CR1 585 chrUn_NT_464378v1 526 1386 GGXHOI 360 + 526 1386 0 3 409,194,195, 0,426,665, +,+,+, 600750 Satellite W-chromosome 585 chrUn_NT_464378v1 1605 5266 GGXHOI 369 + 1605 5266 0 4 780,690,1034,1062, 0,802,1530,2599, +,+,+,+, 600752 Satellite W-chromosome 585 chrUn_NT_464378v1 5391 6647 GGXHOI 391 + 5391 6647 0 2 926,313, 0,943, +,+, 600754 Satellite W-chromosome 585 chrUn_NT_464378v1 10369 11616 GGXHOI 408 + 10369 11616 0 2 496,730, 0,517, +,+, 600762 Satellite W-chromosome 585 chrUn_NT_464378v1 11704 13577 GGXHOI 409 + 11704 13577 0 3 625,445,719, 0,662,1154, +,+,+, 600763 Satellite W-chromosome 585 chrUn_NT_464378v1 13665 15407 GGXHOI 400 + 13665 15407 0 2 625,1076, 0,666, +,+, 600765 Satellite W-chromosome 585 chrUn_NT_464378v1 15495 17412 GGXHOI 395 + 15495 17412 0 2 625,1251, 0,666, +,+, 600767 Satellite W-chromosome 585 chrUn_NT_464378v1 17500 19410 GGXHOI 395 + 17500 19410 0 2 625,1248, 0,662, +,+, 600769 Satellite W-chromosome 585 chrUn_NT_464378v1 19498 21235 GGXHOI 400 + 19498 21235 0 2 625,1071, 0,666, +,+, 600771 Satellite W-chromosome 585 chrUn_NT_464378v1 21983 25120 GGXHOI 380 + 21983 25120 0 2 189,2915, 0,222, +,+, 600775 Satellite W-chromosome 585 chrUn_NT_464379v1 225 592 (ACCCCATAGGG)n 540 - 225 592 0 2 133,115, 0,252, -,-, 600784 Satellite Satellite 585 chrUn_NT_464379v1 612 1449 (ACCCCATAGGG)n 497 - 612 1449 0 3 131,234,157, 0,162,680, -,-,-, 600787 Satellite Satellite 585 chrUn_NT_464379v1 2520 2958 (CTCTATGGGG)n 490 + 2520 2958 0 3 81,34,82, 0,200,356, +,+,+, 600796 Satellite Satellite 585 chrUn_NT_464379v1 3438 3810 (ACCCCATAGGG)n 554 - 3438 3810 0 2 227,23, 0,349, -,-, 600802 Satellite Satellite 585 chrUn_NT_464380v1 15941 18309 GGERV28_I-int 161 + 15941 18309 0 3 273,901,780, 0,581,1588, +,+,+, 600814 LTR ERVK 585 chrUn_NT_464380v1 18547 19394 GGLTR7-int 722 + 18547 19394 0 3 218,277,352, 0,218,495, +,+,+, 600815 LTR ERV1 585 chrUn_NT_464381v1 15910 28548 GGXHOI 455 - 15910 28548 0 11 686,1603,1801,1213,2675,700,772,372,148,1337,1085, 0,702,2316,4134,5363,8081,8827,9610,10026,10195,11553, -,-,-,-,-,-,-,-,-,-,-, 600824 Satellite W-chromosome 585 chrUn_NT_464383v1 2336 2459 (TTTTC)n 296 + 2336 2459 0 2 84,8, 0,115, +,+, 600831 Simple_repeat Simple_repeat 585 chrUn_NT_464383v1 8827 9449 CR1-H 678 - 8827 9449 0 2 139,483, 0,139, -,-, 600838 LINE CR1 585 chrUn_NT_464383v1 12241 12698 CR1-H 673 - 12241 12698 0 2 163,294, 0,163, -,-, 600842 LINE CR1 585 chrUn_NT_464384v1 2040 2617 (CGAGG)n 526 + 2040 2617 0 2 189,363, 0,214, +,+, 600868 Simple_repeat Simple_repeat 585 chrUn_NT_464384v1 5317 6183 (CGAGG)n 614 + 5317 6183 0 2 652,184, 0,682, +,+, 600876 Simple_repeat Simple_repeat 585 chrUn_NT_464384v1 7916 8889 (CCTCG)n 595 + 7916 8889 0 3 543,232,198, 0,543,775, +,+,+, 600884 Simple_repeat Simple_repeat 585 chrUn_NT_464384v1 8972 11189 GGLTR10D-int 923 + 8972 11189 0 2 1850,364, 0,1853, +,+, 600887 LTR ERVK 585 chrUn_NT_464384v1 11244 13413 GGLTR7-int 607 - 11244 13413 0 2 526,338, 0,1831, -,-, 600888 LTR ERV1 585 chrUn_NT_464384v1 17566 17797 G-rich 415 + 17566 17797 0 2 38,143, 0,88, +,+, 600893 Low_complexity Low_complexity 585 chrUn_NT_464385v1 5339 11091 GGLTR7-int 845 - 5339 11091 0 4 505,1138,1244,223, 0,1032,4272,5529, -,-,-,-, 600903 LTR ERV1 585 chrUn_NT_464385v1 7851 9404 GGERVK10-int 298 - 7851 9404 0 2 497,62, 0,1491, -,-, 600906 LTR ERVK 585 chrUn_NT_464385v1 15378 19662 GGLTR11-int 265 - 15378 19662 0 6 1031,233,372,220,129,254, 0,1934,2367,2978,3821,4030, -,-,-,-,-,-, 600909 LTR ERV1 585 chrUn_NT_464385v1 20040 20848 GGLTR11 741 - 20040 20848 0 2 535,273, 0,535, -,-, 600911 LTR ERV1 585 chrUn_NT_464385v1 22082 28296 GGERVL-A-int 783 + 22082 28296 0 5 527,1742,3345,46,508, 0,527,2269,5657,5706, +,+,+,+,+, 600914 LTR ERVL 585 chrUn_NT_464386v1 1993 2977 GGXHOI 389 - 1993 2977 0 2 594,366, 0,618, -,-, 600917 Satellite W-chromosome 585 chrUn_NT_464386v1 7718 9284 GGXHOI 423 - 7718 9284 0 2 271,1276, 0,290, -,-, 600922 Satellite W-chromosome 585 chrUn_NT_464386v1 9380 14397 GGXHOI 448 - 9380 14397 0 6 1390,773,634,621,897,566, 0,1407,2196,2876,3538,4451, -,-,-,-,-,-, 600923 Satellite W-chromosome 585 chrUn_NT_464386v1 14601 15871 GGXHOI 456 - 14601 15871 0 2 626,603, 0,667, -,-, 600924 Satellite W-chromosome 585 chrUn_NT_464386v1 17632 18788 GGXHOI 396 - 17632 18788 0 3 450,262,385, 0,491,771, -,-,-, 600927 Satellite W-chromosome 585 chrUn_NT_464386v1 23517 24669 GGXHOI 331 - 23517 24669 0 2 707,395, 0,757, -,-, 600933 Satellite W-chromosome 585 chrUn_NT_464387v1 12442 14065 GGXHOI 392 + 12442 14065 0 2 1046,514, 0,1109, +,+, 600953 Satellite W-chromosome 585 chrUn_NT_464387v1 14164 15215 GGXHOI 392 + 14164 15215 0 2 472,516, 0,535, +,+, 600954 Satellite W-chromosome 585 chrUn_NT_464387v1 15314 17513 GGXHOI 389 + 15314 17513 0 3 472,1085,516, 0,535,1683, +,+,+, 600955 Satellite W-chromosome 585 chrUn_NT_464387v1 18186 19763 GGXHOI 384 + 18186 19763 0 2 1047,509, 0,1068, +,+, 600957 Satellite W-chromosome 585 chrUn_NT_464387v1 19947 21017 GGXHOI 378 + 19947 21017 0 2 385,623, 0,447, +,+, 600958 Satellite W-chromosome 585 chrUn_NT_464387v1 21085 22066 GGXHOI 370 + 21085 22066 0 2 105,844, 0,137, +,+, 600959 Satellite W-chromosome 585 chrUn_NT_464387v1 23297 24273 GGXHOI 360 + 23297 24273 0 2 646,309, 0,667, +,+, 600961 Satellite W-chromosome 585 chrUn_NT_464387v1 25113 25784 GGXHOI 341 + 25113 25784 0 2 407,214, 0,457, +,+, 600963 Satellite W-chromosome 585 chrUn_NT_464388v1 1309 15234 GGXHOI 387 + 1309 15234 0 14 1192,180,1309,1101,1298,1300,1296,176,1306,1100,1304,432,850,715, 0,1224,1427,2759,3892,5222,6554,7882,8082,9412,10544,11880,12328,13210, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 600970 Satellite W-chromosome 585 chrUn_NT_464388v1 15598 19294 GGXHOI 385 + 15598 19294 0 5 458,532,1282,152,1123, 0,505,1069,2377,2573, +,+,+,+,+, 600971 Satellite W-chromosome 585 chrUn_NT_464388v1 20045 20348 GGXHOI 285 - 20045 20348 0 2 147,142, 0,161, -,-, 600976 Satellite W-chromosome 585 chrUn_NT_464388v1 20575 21700 (CCTTG)n 584 + 20575 21700 0 4 176,223,109,231, 0,203,605,894, +,+,+,+, 600978 Simple_repeat Simple_repeat 585 chrUn_NT_464388v1 21902 22629 (GCCTG)n 481 + 21902 22629 0 2 298,386, 0,341, +,+, 600983 Simple_repeat Simple_repeat 585 chrUn_NT_464388v1 23502 23938 (CCTTG)n 430 + 23502 23938 0 2 233,189, 0,247, +,+, 600992 Simple_repeat Simple_repeat 585 chrUn_NT_464389v1 13378 13871 (CCTTG)n 642 + 13378 13871 0 2 188,125, 0,368, +,+, 601010 Simple_repeat Simple_repeat 585 chrUn_NT_464389v1 15199 15821 (GCCTG)n 528 + 15199 15821 0 3 168,40,54, 0,351,568, +,+,+, 601021 Simple_repeat Simple_repeat 585 chrUn_NT_464389v1 18101 20936 GGERVL-B-int 572 + 18101 20936 0 3 93,1784,932, 0,119,1903, +,+,+, 601029 LTR ERVL 585 chrUn_NT_464389v1 21661 22996 GGLTR7B 325 + 21661 22996 0 2 99,282, 0,1053, +,+, 601032 LTR ERV1 585 chrUn_NT_464390v1 1843 3758 GGXHOI 584 - 1843 3758 0 5 247,147,412,147,26, 0,258,963,1386,1889, -,-,-,-,-, 601038 Satellite W-chromosome 585 chrUn_NT_464390v1 3843 11793 GGXHOI 592 - 3843 11793 0 11 94,299,146,458,575,299,148,146,414,148,1138, 0,514,824,1641,2656,3904,4214,4736,5563,5988,6812, -,-,-,-,-,-,-,-,-,-,-, 601041 Satellite W-chromosome 585 chrUn_NT_464390v1 11835 17784 GGXHOI 574 - 11835 17784 0 10 249,148,299,147,195,404,405,1106,275,285, 0,260,1082,1392,2277,2520,2966,3640,5057,5664, -,-,-,-,-,-,-,-,-,-, 601050 Satellite W-chromosome 585 chrUn_NT_464390v1 17795 20907 GGXHOI 552 - 17795 20907 0 2 2099,630, 0,2482, -,-, 601057 Satellite W-chromosome 585 chrUn_NT_464390v1 20948 25399 GGXHOI 571 - 20948 25399 0 7 262,147,568,572,303,412,148, 0,273,977,2099,3026,3880,4303, -,-,-,-,-,-,-, 601060 Satellite W-chromosome 585 chrUn_NT_464390v1 26119 28442 GGXHOI 583 - 26119 28442 0 4 247,147,436,121, 0,258,1091,2202, -,-,-,-, 601066 Satellite W-chromosome 585 chrUn_NT_464391v1 12118 14040 GGLTR7-int 668 - 12118 14040 0 4 33,74,655,528, 0,34,739,1394, -,-,-,-, 601080 LTR ERV1 585 chrUn_NT_464392v1 1067 1494 GGLTR7A 880 - 1067 1494 0 2 252,175, 0,252, -,-, 601091 LTR ERV1 585 chrUn_NT_464392v1 2161 2705 (CAAGG)n 509 + 2161 2705 0 3 92,81,195, 0,268,349, +,+,+, 601097 Simple_repeat Simple_repeat 585 chrUn_NT_464392v1 2801 3408 (CAAGG)n 594 + 2801 3408 0 3 136,11,105, 0,309,502, +,+,+, 601100 Simple_repeat Simple_repeat 585 chrUn_NT_464392v1 4592 5100 (CCCTT)n 404 + 4592 5100 0 2 11,18, 0,490, +,+, 601105 Simple_repeat Simple_repeat 585 chrUn_NT_464392v1 14779 16181 GGLTR7-int 328 - 14779 16181 0 3 281,210,102, 0,1064,1300, -,-,-, 601113 LTR ERV1 585 chrUn_NT_464392v1 16875 19064 GGERVL-B-int 635 - 16875 19064 0 2 289,1754, 0,435, -,-, 601115 LTR ERVL 585 chrUn_NT_464392v1 21107 21727 (CAGGC)n 522 + 21107 21727 0 2 108,329, 0,291, +,+, 601119 Simple_repeat Simple_repeat 585 chrUn_NT_464392v1 22575 23282 (CAAGG)n 631 + 22575 23282 0 3 223,264,194, 0,249,513, +,+,+, 601128 Simple_repeat Simple_repeat 585 chrUn_NT_464392v1 23486 24036 (CAAGG)n 594 + 23486 24036 0 2 264,113, 0,437, +,+, 601130 Simple_repeat Simple_repeat 585 chrUn_NT_464392v1 24088 24972 CR1-F0 903 + 24088 24972 0 2 752,132, 0,752, +,+, 601132 LINE CR1 585 chrUn_NT_464394v1 7702 8903 GGXHOI 321 - 7702 8903 0 2 927,222, 0,979, -,-, 601162 Satellite W-chromosome 585 chrUn_NT_464394v1 9084 11469 GGXHOI 390 - 9084 11469 0 2 1016,1346, 0,1039, -,-, 601163 Satellite W-chromosome 585 chrUn_NT_464394v1 12502 22423 GGXHOI 389 - 12502 22423 0 4 6088,229,1231,2330, 0,6102,6343,7591, -,-,-,-, 601165 Satellite W-chromosome 585 chrUn_NT_464394v1 22743 23609 GGXHOI 349 - 22743 23609 0 3 355,219,242, 0,372,624, -,-,-, 601167 Satellite W-chromosome 585 chrUn_NT_464394v1 23708 24288 GGXHOI 395 - 23708 24288 0 2 293,265, 0,315, -,-, 601168 Satellite W-chromosome 585 chrUn_NT_464394v1 24384 27497 GGXHOI 386 - 24384 27497 0 2 527,2557, 0,556, -,-, 601169 Satellite W-chromosome 585 chrUn_NT_464395v1 20103 27816 GGXHOI 396 - 20103 27816 0 8 1423,3160,304,469,826,464,629,299, 0,1435,4612,4932,5424,6266,6752,7414, -,-,-,-,-,-,-,-, 601175 Satellite W-chromosome 585 chrUn_NT_464396v1 1513 2834 GGXHOI 367 - 1513 2834 0 3 368,519,373, 0,409,948, -,-,-, 601179 Satellite W-chromosome 585 chrUn_NT_464396v1 3898 4735 GGXHOI 404 - 3898 4735 0 2 442,355, 0,482, -,-, 601182 Satellite W-chromosome 585 chrUn_NT_464396v1 4836 6214 GGXHOI 392 - 4836 6214 0 2 930,404, 0,974, -,-, 601183 Satellite W-chromosome 585 chrUn_NT_464396v1 6312 7064 GGXHOI 374 - 6312 7064 0 3 292,158,246, 0,336,506, -,-,-, 601184 Satellite W-chromosome 585 chrUn_NT_464396v1 7672 9483 GGXHOI 380 - 7672 9483 0 4 349,532,348,492, 0,369,951,1319, -,-,-,-, 601186 Satellite W-chromosome 585 chrUn_NT_464396v1 11954 13195 GGXHOI 374 - 11954 13195 0 3 394,454,332, 0,414,909, -,-,-, 601192 Satellite W-chromosome 585 chrUn_NT_464396v1 13409 14182 GGXHOI 375 - 13409 14182 0 3 320,108,289, 0,361,484, -,-,-, 601193 Satellite W-chromosome 585 chrUn_NT_464396v1 16678 17423 GGXHOI 374 - 16678 17423 0 2 356,369, 0,376, -,-, 601197 Satellite W-chromosome 585 chrUn_NT_464396v1 21743 22719 GGXHOI 398 - 21743 22719 0 3 448,110,360, 0,491,616, -,-,-, 601205 Satellite W-chromosome 585 chrUn_NT_464396v1 23198 24019 GGXHOI 364 - 23198 24019 0 2 517,290, 0,531, -,-, 601207 Satellite W-chromosome 585 chrUn_NT_464396v1 24105 25500 GGXHOI 387 - 24105 25500 0 3 436,402,444, 0,491,951, -,-,-, 601208 Satellite W-chromosome 585 chrUn_NT_464397v1 2113 8839 GGXHOI 414 + 2113 8839 0 9 401,479,452,940,1487,415,1000,882,485, 0,421,920,1392,2353,3889,4324,5339,6241, +,+,+,+,+,+,+,+,+, 601218 Satellite W-chromosome 585 chrUn_NT_464397v1 9876 13187 GGXHOI 425 + 9876 13187 0 4 408,1408,485,950, 0,428,1856,2361, +,+,+,+, 601220 Satellite W-chromosome 585 chrUn_NT_464397v1 13258 18505 GGXHOI 427 + 13258 18505 0 7 410,1889,455,414,1000,456,477, 0,430,2339,2843,3277,4297,4770, +,+,+,+,+,+,+, 601221 Satellite W-chromosome 585 chrUn_NT_464397v1 18576 20545 GGXHOI 427 + 18576 20545 0 3 455,443,1034, 0,472,935, +,+,+, 601222 Satellite W-chromosome 585 chrUn_NT_464397v1 20616 21565 GGXHOI 433 + 20616 21565 0 2 455,478, 0,471, +,+, 601223 Satellite W-chromosome 585 chrUn_NT_464397v1 21636 23532 GGXHOI 401 + 21636 23532 0 3 955,483,424, 0,972,1472, +,+,+, 601224 Satellite W-chromosome 585 chrUn_NT_464397v1 23743 24947 GGXHOI 372 + 23743 24947 0 2 173,1011, 0,193, +,+, 601225 Satellite W-chromosome 585 chrUn_NT_464397v1 25212 25891 GGXHOI 399 + 25212 25891 0 2 308,357, 0,322, +,+, 601226 Satellite W-chromosome 585 chrUn_NT_464397v1 25962 26882 GGXHOI 397 + 25962 26882 0 2 455,450, 0,470, +,+, 601227 Satellite W-chromosome 585 chrUn_NT_464398v1 7048 7671 CR1-H 681 - 7048 7671 0 2 139,478, 0,145, -,-, 601235 LINE CR1 585 chrUn_NT_464398v1 10216 10673 CR1-H 677 - 10216 10673 0 2 163,294, 0,163, -,-, 601239 LINE CR1 585 chrUn_NT_464398v1 20908 21518 CR1-H 607 - 20908 21518 0 2 130,460, 0,150, -,-, 601248 LINE CR1 585 chrUn_NT_464398v1 24270 24747 CR1-H 553 - 24270 24747 0 2 165,312, 0,165, -,-, 601252 LINE CR1 585 chrUn_NT_464399v1 1892 2939 GGXHOI 392 + 1892 2939 0 2 472,512, 0,535, +,+, 601256 Satellite W-chromosome 585 chrUn_NT_464399v1 4756 6079 GGXHOI 388 + 4756 6079 0 2 959,347, 0,976, +,+, 601259 Satellite W-chromosome 585 chrUn_NT_464399v1 7900 9234 GGXHOI 391 + 7900 9234 0 2 968,349, 0,985, +,+, 601263 Satellite W-chromosome 585 chrUn_NT_464399v1 9417 10381 GGXHOI 389 + 9417 10381 0 2 385,516, 0,448, +,+, 601264 Satellite W-chromosome 585 chrUn_NT_464399v1 10480 11531 GGXHOI 392 + 10480 11531 0 2 472,516, 0,535, +,+, 601265 Satellite W-chromosome 585 chrUn_NT_464399v1 11630 12681 GGXHOI 392 + 11630 12681 0 2 472,516, 0,535, +,+, 601266 Satellite W-chromosome 585 chrUn_NT_464399v1 12780 13831 GGXHOI 392 + 12780 13831 0 2 472,516, 0,535, +,+, 601267 Satellite W-chromosome 585 chrUn_NT_464399v1 17909 18360 GGXHOI 347 + 17909 18360 0 2 131,306, 0,145, +,+, 601272 Satellite W-chromosome 585 chrUn_NT_464399v1 18545 19505 GGXHOI 388 + 18545 19505 0 2 385,512, 0,448, +,+, 601273 Satellite W-chromosome 585 chrUn_NT_464399v1 20175 21789 GGXHOI 378 + 20175 21789 0 2 1037,514, 0,1100, +,+, 601275 Satellite W-chromosome 585 chrUn_NT_464400v1 308 2789 GGERVL-B-int 773 - 308 2789 0 3 914,1254,313, 0,914,2168, -,-,-, 601287 LTR ERVL 585 chrUn_NT_464400v1 5116 6184 GGLTR7A 845 - 5116 6184 0 2 609,459, 0,609, -,-, 601291 LTR ERV1 585 chrUn_NT_464400v1 6715 7143 GGLTR7A 885 - 6715 7143 0 2 254,174, 0,254, -,-, 601293 LTR ERV1 585 chrUn_NT_464400v1 7710 8482 (CAGGC)n 547 + 7710 8482 0 3 128,47,387, 0,312,385, +,+,+, 601298 Simple_repeat Simple_repeat 585 chrUn_NT_464400v1 8948 9417 (CAAGG)n 531 + 8948 9417 0 2 210,259, 0,210, +,+, 601302 Simple_repeat Simple_repeat 585 chrUn_NT_464400v1 9475 10152 (CAAGG)n 505 + 9475 10152 0 2 423,233, 0,444, +,+, 601304 Simple_repeat Simple_repeat 585 chrUn_NT_464400v1 10663 10969 (CAGGC)n 481 + 10663 10969 0 2 94,212, 0,94, +,+, 601310 Simple_repeat Simple_repeat 585 chrUn_NT_464400v1 15297 16822 GGERVL-B-int 831 + 15297 16822 0 2 779,746, 0,779, +,+, 601326 LTR ERVL 585 chrUn_NT_464400v1 16824 18174 GGLTR7-int 391 + 16824 18174 0 3 60,233,281, 0,62,1069, +,+,+, 601327 LTR ERV1 585 chrUn_NT_464400v1 27485 27888 (GCCTG)n 517 + 27485 27888 0 2 209,194, 0,209, +,+, 601341 Simple_repeat Simple_repeat 585 chrUn_NT_464401v1 3105 9782 GGXHOI 576 + 3105 9782 0 3 68,24,366, 0,6063,6311, +,+,+, 601345 Satellite W-chromosome 585 chrUn_NT_464401v1 9437 11792 Sat-CR1_GG 184 + 9437 11792 0 2 361,431, 0,1924, +,+, 601348 Satellite Satellite 585 chrUn_NT_464401v1 11404 18818 GGXHOI 560 + 11404 18818 0 5 856,215,150,192,68, 0,874,6122,6283,7346, +,+,+,+,+, 601350 Satellite W-chromosome 585 chrUn_NT_464401v1 18947 23973 GGXHOI 566 + 18947 23973 0 2 68,1946, 0,3080, +,+, 601353 Satellite W-chromosome 585 chrUn_NT_464401v1 24017 25418 GGXHOI 550 + 24017 25418 0 2 637,122, 0,1279, +,+, 601356 Satellite W-chromosome 585 chrUn_NT_464401v1 26318 28171 GGXHOI 554 + 26318 28171 0 3 344,704,126, 0,361,1727, +,+,+, 601360 Satellite W-chromosome 585 chrUn_NT_464403v1 673 1585 (CAAGG)n 461 + 673 1585 0 3 176,187,502, 0,194,410, +,+,+, 601387 Simple_repeat Simple_repeat 585 chrUn_NT_464403v1 1862 2699 (CCTTG)n 469 + 1862 2699 0 3 248,357,181, 0,286,656, +,+,+, 601389 Simple_repeat Simple_repeat 585 chrUn_NT_464403v1 5619 6652 GGXHOI 358 - 5619 6652 0 2 747,223, 0,810, -,-, 601392 Satellite W-chromosome 585 chrUn_NT_464403v1 16041 17034 GGXHOI 341 - 16041 17034 0 3 268,234,430, 0,313,563, -,-,-, 601405 Satellite W-chromosome 585 chrUn_NT_464403v1 17175 18191 GGXHOI 339 - 17175 18191 0 2 521,476, 0,540, -,-, 601406 Satellite W-chromosome 585 chrUn_NT_464403v1 18257 20226 GGXHOI 360 - 18257 20226 0 3 552,345,959, 0,608,1010, -,-,-, 601407 Satellite W-chromosome 585 chrUn_NT_464403v1 20896 21852 GGXHOI 374 - 20896 21852 0 2 514,381, 0,575, -,-, 601409 Satellite W-chromosome 585 chrUn_NT_464403v1 24948 26297 GGXHOI 347 - 24948 26297 0 3 523,407,305, 0,579,1044, -,-,-, 601414 Satellite W-chromosome 585 chrUn_NT_464404v1 7491 10257 GGXHOI 390 - 7491 10257 0 5 1206,351,595,184,351, 0,1223,1595,2212,2415, -,-,-,-,-, 601420 Satellite W-chromosome 585 chrUn_NT_464406v1 10315 12076 GGERVL-A-int 757 + 10315 12076 0 2 457,1304, 0,457, +,+, 601436 LTR ERVL 585 chrUn_NT_464407v1 7692 7941 (GCCCCACAGCT)n 369 + 7692 7941 0 2 105,109, 0,140, +,+, 601456 Satellite Satellite 585 chrUn_NT_464407v1 7980 8753 GGLTR11 150 - 7980 8753 0 2 326,240, 0,533, -,-, 601457 LTR ERV1 585 chrUn_NT_464407v1 18130 22829 CR1-D2 573 - 18130 22829 0 2 570,802, 0,3897, -,-, 601464 LINE CR1 585 chrUn_NT_464407v1 19394 22045 CR1-D 640 - 19394 22045 0 2 1643,1008, 0,1643, -,-, 601466 LINE CR1 585 chrUn_NT_464407v1 22828 23073 Char12Mar1_GG 488 - 22828 23073 0 2 72,173, 0,72, -,-, 601467 DNA hAT-Charlie 585 chrUn_NT_464409v1 10572 10714 GA-rich 270 + 10572 10714 0 2 43,44, 0,98, +,+, 601508 Low_complexity Low_complexity 585 chrUn_NT_464410v1 1801 5539 GGXHOI 385 + 1801 5539 0 3 972,179,2472, 0,1024,1266, +,+,+, 601548 Satellite W-chromosome 585 chrUn_NT_464410v1 5603 21978 GGXHOI 399 + 5603 21978 0 9 1064,1098,232,818,4095,1096,3346,3342,1063, 0,1090,2214,2460,3329,7450,8572,11944,15312, +,+,+,+,+,+,+,+,+, 601549 Satellite W-chromosome 585 chrUn_NT_464410v1 23159 24953 GGXHOI 358 + 23159 24953 0 2 971,808, 0,986, +,+, 601551 Satellite W-chromosome 585 chrUn_NT_464410v1 25018 25497 GGXHOI 384 + 25018 25497 0 2 231,231, 0,248, +,+, 601552 Satellite W-chromosome 585 chrUn_NT_464410v1 27341 27837 GGXHOI 368 + 27341 27837 0 2 142,334, 0,162, +,+, 601556 Satellite W-chromosome 585 chrUn_NT_464411v1 3833 14506 GGXHOI 394 - 3833 14506 0 13 1788,223,553,563,231,344,600,2200,192,845,587,872,1455, 0,1811,2052,2622,3201,3448,3810,4433,6650,6859,7723,8328,9218, -,-,-,-,-,-,-,-,-,-,-,-,-, 601558 Satellite W-chromosome 585 chrUn_NT_464411v1 14570 16306 GGXHOI 418 - 14570 16306 0 2 1414,306, 0,1430, -,-, 601559 Satellite W-chromosome 585 chrUn_NT_464411v1 16370 16837 GGXHOI 310 - 16370 16837 0 3 137,129,138, 0,185,329, -,-,-, 601560 Satellite W-chromosome 585 chrUn_NT_464411v1 16959 19277 GGXHOI 389 - 16959 19277 0 3 732,1277,232, 0,786,2086, -,-,-, 601561 Satellite W-chromosome 585 chrUn_NT_464411v1 19378 20731 GGXHOI 383 - 19378 20731 0 3 262,527,521, 0,280,832, -,-,-, 601562 Satellite W-chromosome 585 chrUn_NT_464411v1 21316 23410 GGXHOI 343 - 21316 23410 0 4 883,752,145,250, 0,910,1683,1844, -,-,-,-, 601563 Satellite W-chromosome 585 chrUn_NT_464411v1 23624 27849 GGXHOI 351 - 23624 27849 0 6 1613,466,342,865,694,125, 0,1631,2115,2475,3365,4100, -,-,-,-,-,-, 601564 Satellite W-chromosome 585 chrUn_NT_464412v1 25619 27844 CR1-D 604 - 25619 27844 0 3 178,1188,730, 0,307,1495, -,-,-, 601583 LINE CR1 585 chrUn_NT_464413v1 3610 8394 GGXHOI 380 + 3610 8394 0 7 1033,937,731,459,562,397,525, 0,1053,2009,2786,3260,3842,4259, +,+,+,+,+,+,+, 601586 Satellite W-chromosome 585 chrUn_NT_464413v1 8519 13541 GGXHOI 415 + 8519 13541 0 10 237,352,394,1148,395,689,480,440,396,319, 0,254,626,1039,2207,2621,3329,3828,4288,4703, +,+,+,+,+,+,+,+,+,+, 601587 Satellite W-chromosome 585 chrUn_NT_464413v1 13641 18520 GGXHOI 406 + 13641 18520 0 10 271,438,357,562,156,456,397,1139,395,532, 0,290,748,1120,1703,1880,2356,2773,3932,4347, +,+,+,+,+,+,+,+,+,+, 601588 Satellite W-chromosome 585 chrUn_NT_464413v1 18700 27161 GGXHOI 395 + 18700 27161 0 10 1057,509,853,361,1363,441,1974,651,477,553, 0,1077,1616,2484,2908,4291,4752,6745,7411,7908, +,+,+,+,+,+,+,+,+,+, 601589 Satellite W-chromosome 585 chrUn_NT_464413v1 27483 27837 GGXHOI 463 + 27483 27837 0 2 271,64, 0,290, +,+, 601590 Satellite W-chromosome 585 chrUn_NT_464414v1 8414 11152 CR1-Y 472 + 8414 11152 0 2 177,2068, 0,670, +,+, 601594 LINE CR1 585 chrUn_NT_464414v1 17978 18340 GGCAN 894 + 17978 18340 0 2 212,82, 0,280, +,+, 601607 Unknown Unknown 585 chrUn_NT_464415v1 241 961 (CGAGG)n 431 + 241 961 0 3 191,164,146, 0,226,574, +,+,+, 601613 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 1412 1816 (CGAGG)n 523 + 1412 1816 0 2 178,181, 0,223, +,+, 601618 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 5224 5560 (CGAGG)n 490 + 5224 5560 0 2 139,186, 0,150, +,+, 601633 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 7770 8354 (CGAGG)n 529 + 7770 8354 0 2 370,176, 0,408, +,+, 601640 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 9832 10349 (GGCGA)n 372 + 9832 10349 0 2 155,313, 0,204, +,+, 601645 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 10658 11028 (CGAGG)n 556 + 10658 11028 0 2 177,174, 0,196, +,+, 601649 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 10982 11771 (CAAGG)n 495 + 10982 11771 0 3 175,345,179, 0,205,610, +,+,+, 601650 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 13133 13748 (CAAGG)n 542 + 13133 13748 0 2 204,160, 0,455, +,+, 601657 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 13747 14228 (CCTTG)n 540 + 13747 14228 0 2 219,36, 0,445, +,+, 601659 Simple_repeat Simple_repeat 585 chrUn_NT_464415v1 15561 15995 GGXHOI 405 - 15561 15995 0 2 270,148, 0,286, -,-, 601667 Satellite W-chromosome 585 chrUn_NT_464415v1 16093 17349 GGXHOI 362 - 16093 17349 0 2 681,559, 0,697, -,-, 601668 Satellite W-chromosome 585 chrUn_NT_464415v1 17414 18062 GGXHOI 398 - 17414 18062 0 2 321,285, 0,363, -,-, 601669 Satellite W-chromosome 585 chrUn_NT_464415v1 18229 20862 GGXHOI 375 - 18229 20862 0 4 352,840,592,758, 0,369,1225,1875, -,-,-,-, 601670 Satellite W-chromosome 585 chrUn_NT_464415v1 20960 22168 GGXHOI 365 - 20960 22168 0 3 350,147,673, 0,367,535, -,-,-, 601671 Satellite W-chromosome 585 chrUn_NT_464415v1 22313 23486 GGXHOI 402 - 22313 23486 0 2 1009,149, 0,1024, -,-, 601672 Satellite W-chromosome 585 chrUn_NT_464415v1 26282 27816 GGXHOI 321 - 26282 27816 0 4 289,207,177,761, 0,311,535,773, -,-,-,-, 601678 Satellite W-chromosome 585 chrUn_NT_464416v1 1970 3608 GGERVL-B-int 723 - 1970 3608 0 2 445,1193, 0,445, -,-, 601680 LTR ERVL 585 chrUn_NT_464416v1 3608 10480 GGLTR7-int 822 + 3608 10480 0 5 589,720,120,4104,569, 0,589,1309,1429,6303, +,+,+,+,+, 601681 LTR ERV1 585 chrUn_NT_464416v1 9147 9224 GGLTR3A 788 + 9147 9224 0 2 38,39, 0,38, +,+, 601682 LTR ERVL 585 chrUn_NT_464416v1 12723 13740 GGERVL18-int 443 - 12723 13740 0 2 578,129, 0,888, -,-, 601690 LTR ERVL 585 chrUn_NT_464416v1 14011 14101 GGLTR3F2 810 - 14011 14101 0 2 46,43, 0,47, -,-, 601693 LTR ERVL 585 chrUn_NT_464416v1 17704 19866 GGLTR3C2 633 + 17704 19866 0 2 220,150, 0,2012, +,+, 601697 LTR ERVL 585 chrUn_NT_464416v1 22621 27645 GGERVL-A-int 798 + 22621 27645 0 4 614,3792,51,527, 0,614,4446,4497, +,+,+,+, 601708 LTR ERVL 585 chrUn_NT_464417v1 12155 15167 CR1-C 534 + 12155 15167 0 2 2625,352, 0,2660, +,+, 601717 LINE CR1 585 chrUn_NT_464417v1 15165 16984 Z-REP 468 + 15165 16984 0 2 288,1239, 0,580, +,+, 601719 Satellite macro 585 chrUn_NT_464417v1 26935 27756 CR1-D 538 - 26935 27756 0 2 744,77, 0,744, -,-, 601726 LINE CR1 585 chrUn_NT_464418v1 2935 4591 GGXHOI 379 - 2935 4591 0 2 514,1081, 0,575, -,-, 601731 Satellite W-chromosome 585 chrUn_NT_464418v1 6065 7114 GGXHOI 378 - 6065 7114 0 2 514,472, 0,577, -,-, 601734 Satellite W-chromosome 585 chrUn_NT_464418v1 7868 9654 GGXHOI 389 - 7868 9654 0 2 1009,714, 0,1072, -,-, 601736 Satellite W-chromosome 585 chrUn_NT_464418v1 12139 13190 GGXHOI 378 - 12139 13190 0 2 516,472, 0,579, -,-, 601740 Satellite W-chromosome 585 chrUn_NT_464418v1 13289 14340 GGXHOI 378 - 13289 14340 0 2 516,472, 0,579, -,-, 601741 Satellite W-chromosome 585 chrUn_NT_464418v1 15094 16638 GGXHOI 379 - 15094 16638 0 2 1009,472, 0,1072, -,-, 601743 Satellite W-chromosome 585 chrUn_NT_464418v1 24076 24775 (CAAGG)n 538 + 24076 24775 0 2 335,347, 0,352, +,+, 601753 Simple_repeat Simple_repeat 585 chrUn_NT_464418v1 25146 26007 (CCTTG)n 500 + 25146 26007 0 3 232,373,193, 0,251,668, +,+,+, 601755 Simple_repeat Simple_repeat 585 chrUn_NT_464418v1 26389 26795 (CAAGG)n 543 + 26389 26795 0 3 46,16,178, 0,199,228, +,+,+, 601758 Simple_repeat Simple_repeat 585 chrUn_NT_464418v1 26851 27346 (CCTTG)n 557 + 26851 27346 0 3 85,26,179, 0,275,316, +,+,+, 601760 Simple_repeat Simple_repeat 585 chrUn_NT_464419v1 1719 3993 GGXHOI 409 - 1719 3993 0 4 181,186,588,1259, 0,200,411,1015, -,-,-,-, 601764 Satellite W-chromosome 585 chrUn_NT_464419v1 4169 5185 GGXHOI 379 - 4169 5185 0 2 103,889, 0,127, -,-, 601765 Satellite W-chromosome 585 chrUn_NT_464419v1 5250 7805 GGXHOI 383 - 5250 7805 0 4 359,152,438,1496, 0,383,581,1059, -,-,-,-, 601766 Satellite W-chromosome 585 chrUn_NT_464419v1 8192 10566 GGXHOI 392 - 8192 10566 0 4 651,203,741,680, 0,666,908,1694, -,-,-,-, 601767 Satellite W-chromosome 585 chrUn_NT_464419v1 11233 12557 GGXHOI 443 - 11233 12557 0 3 112,147,973, 0,148,351, -,-,-, 601769 Satellite W-chromosome 585 chrUn_NT_464419v1 12640 16597 GGXHOI 418 - 12640 16597 0 3 205,2639,1056, 0,246,2901, -,-,-, 601770 Satellite W-chromosome 585 chrUn_NT_464419v1 16672 27715 GGXHOI 414 - 16672 27715 0 13 1635,434,516,281,514,1557,1321,280,591,863,402,1736,594, 0,1659,2142,2674,2972,3545,5119,6493,6785,7394,8276,8689,10449, -,-,-,-,-,-,-,-,-,-,-,-,-, 601771 Satellite W-chromosome 585 chrUn_NT_464422v1 2794 4571 GGXHOI 384 + 2794 4571 0 4 362,522,521,278, 0,378,919,1499, +,+,+,+, 601859 Satellite W-chromosome 585 chrUn_NT_464422v1 5280 6685 GGXHOI 385 + 5280 6685 0 3 452,437,443, 0,510,962, +,+,+, 601861 Satellite W-chromosome 585 chrUn_NT_464422v1 8207 9567 GGXHOI 388 + 8207 9567 0 3 440,440,440, 0,460,920, +,+,+, 601865 Satellite W-chromosome 585 chrUn_NT_464422v1 9656 11990 GGXHOI 397 + 9656 11990 0 4 456,440,900,439, 0,515,975,1895, +,+,+,+, 601866 Satellite W-chromosome 585 chrUn_NT_464422v1 12931 14947 GGXHOI 387 + 12931 14947 0 4 440,819,384,279, 0,460,1333,1737, +,+,+,+, 601869 Satellite W-chromosome 585 chrUn_NT_464422v1 18718 19884 GGXHOI 409 + 18718 19884 0 2 745,401, 0,765, +,+, 601875 Satellite W-chromosome 585 chrUn_NT_464422v1 20134 21882 GGXHOI 407 + 20134 21882 0 3 457,813,401, 0,514,1347, +,+,+, 601876 Satellite W-chromosome 585 chrUn_NT_464422v1 21999 23690 GGXHOI 401 + 21999 23690 0 2 1270,401, 0,1290, +,+, 601877 Satellite W-chromosome 585 chrUn_NT_464422v1 23941 25690 GGXHOI 398 + 23941 25690 0 2 1328,401, 0,1348, +,+, 601878 Satellite W-chromosome 585 chrUn_NT_464422v1 25941 27670 GGXHOI 401 + 25941 27670 0 2 1313,396, 0,1333, +,+, 601879 Satellite W-chromosome 585 chrUn_NT_464424v1 14264 16012 CR1-X 419 - 14264 16012 0 4 215,132,171,111, 0,257,389,1637, -,-,-,-, 601920 LINE CR1 585 chrUn_NT_464424v1 19759 20884 CR1-B2 707 + 19759 20884 0 2 225,897, 0,228, +,+, 601923 LINE CR1 585 chrUn_NT_464425v1 1861 2244 A-rich 353 + 1861 2244 0 3 43,165,36, 0,137,347, +,+,+, 601939 Low_complexity Low_complexity 585 chrUn_NT_464425v1 5138 5244 (GGAT)n 815 + 5138 5244 0 2 30,30, 0,76, +,+, 601949 Simple_repeat Simple_repeat 585 chrUn_NT_464426v1 12695 13851 GGXHOI 339 - 12695 13851 0 2 583,512, 0,644, -,-, 601978 Satellite W-chromosome 585 chrUn_NT_464426v1 14909 27600 GGXHOI 400 - 14909 27600 0 14 958,1047,1007,1055,478,519,1065,476,2285,1133,479,1453,320,145, 0,980,2048,3078,4154,4647,5188,6274,6765,9064,10218,10711,12212,12546, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 601981 Satellite W-chromosome 585 chrUn_NT_464427v1 9032 10430 GGLTR7-int 331 - 9032 10430 0 3 280,260,101, 0,1035,1297, -,-,-, 601989 LTR ERV1 585 chrUn_NT_464427v1 11166 14005 GGERVL-B-int 717 - 11166 14005 0 2 915,1924, 0,915, -,-, 601991 LTR ERVL 585 chrUn_NT_464427v1 17422 17909 (CAGGC)n 506 + 17422 17909 0 2 140,319, 0,168, +,+, 602002 Simple_repeat Simple_repeat 585 chrUn_NT_464427v1 17950 18664 (CAAGG)n 556 + 17950 18664 0 3 253,50,39, 0,439,675, +,+,+, 602004 Simple_repeat Simple_repeat 585 chrUn_NT_464427v1 18651 19050 (CAGGC)n 548 + 18651 19050 0 2 185,214, 0,185, +,+, 602007 Simple_repeat Simple_repeat 585 chrUn_NT_464427v1 19017 19292 (CAAGG)n 561 + 19017 19292 0 2 87,188, 0,87, +,+, 602008 Simple_repeat Simple_repeat 585 chrUn_NT_464428v1 2941 4046 GGXHOI 434 - 2941 4046 0 2 641,403, 0,702, -,-, 602019 Satellite W-chromosome 585 chrUn_NT_464428v1 5375 5965 GGXHOI 386 - 5375 5965 0 2 321,224, 0,366, -,-, 602022 Satellite W-chromosome 585 chrUn_NT_464428v1 6696 8114 GGXHOI 397 - 6696 8114 0 2 618,759, 0,659, -,-, 602024 Satellite W-chromosome 585 chrUn_NT_464428v1 8322 11135 GGXHOI 430 - 8322 11135 0 4 493,699,1060,486, 0,509,1249,2327, -,-,-,-, 602025 Satellite W-chromosome 585 chrUn_NT_464428v1 15160 17296 GGXHOI 414 - 15160 17296 0 2 568,1521, 0,615, -,-, 602031 Satellite W-chromosome 585 chrUn_NT_464428v1 17846 18666 GGXHOI 412 - 17846 18666 0 2 271,531, 0,289, -,-, 602032 Satellite W-chromosome 585 chrUn_NT_464428v1 21241 22526 GGXHOI 429 - 21241 22526 0 2 688,539, 0,746, -,-, 602036 Satellite W-chromosome 585 chrUn_NT_464428v1 26980 27552 GGXHOI 381 - 26980 27552 0 2 366,189, 0,383, -,-, 602045 Satellite W-chromosome 585 chrUn_NT_464430v1 11165 11257 CR1-E 649 + 11165 11257 0 2 48,44, 0,48, +,+, 602075 LINE CR1 585 chrUn_NT_464430v1 17647 20753 GGLTR7-int 419 - 17647 20753 0 4 277,949,1625,113, 0,324,1368,2993, -,-,-,-, 602086 LTR ERV1 585 chrUn_NT_464431v1 6650 12772 Z-REP 689 - 6650 12772 0 2 5351,744, 0,5378, -,-, 602097 Satellite macro 585 chrUn_NT_464431v1 13606 18330 GGLTR7-int 775 + 13606 18330 0 6 68,1535,331,1555,259,113, 0,920,2455,2795,4351,4611, +,+,+,+,+,+, 602101 LTR ERV1 585 chrUn_NT_464432v1 4348 23524 GGXHOI 403 - 4348 23524 0 13 2317,216,2094,565,366,3006,1962,151,813,2609,1573,1985,1273, 0,2334,2572,4717,5298,5680,8708,10691,10853,11682,14309,15903,17903, -,-,-,-,-,-,-,-,-,-,-,-,-, 602113 Satellite W-chromosome 585 chrUn_NT_464432v1 23689 26162 GGXHOI 397 - 23689 26162 0 2 1027,1433, 0,1040, -,-, 602114 Satellite W-chromosome 585 chrUn_NT_464433v1 455 1275 GGXHOI 356 - 455 1275 0 2 547,224, 0,596, -,-, 602117 Satellite W-chromosome 585 chrUn_NT_464433v1 1310 2455 GGXHOI 355 - 1310 2455 0 2 694,432, 0,713, -,-, 602119 Satellite W-chromosome 585 chrUn_NT_464433v1 2473 4459 GGXHOI 386 - 2473 4459 0 4 303,193,275,422, 0,325,541,1564, -,-,-,-, 602121 Satellite W-chromosome 585 chrUn_NT_464433v1 4477 5296 GGXHOI 405 - 4477 5296 0 2 305,495, 0,324, -,-, 602125 Satellite W-chromosome 585 chrUn_NT_464433v1 5330 7303 GGXHOI 408 - 5330 7303 0 3 692,422,823, 0,711,1150, -,-,-, 602127 Satellite W-chromosome 585 chrUn_NT_464433v1 7337 9310 GGXHOI 408 - 7337 9310 0 3 692,422,823, 0,711,1150, -,-,-, 602129 Satellite W-chromosome 585 chrUn_NT_464433v1 9344 11315 GGXHOI 411 - 9344 11315 0 4 692,422,307,494, 0,711,1149,1477, -,-,-,-, 602131 Satellite W-chromosome 585 chrUn_NT_464433v1 11349 13321 GGXHOI 410 - 11349 13321 0 4 692,422,307,495, 0,711,1149,1477, -,-,-,-, 602133 Satellite W-chromosome 585 chrUn_NT_464433v1 13355 14488 GGXHOI 410 - 13355 14488 0 2 692,422, 0,711, -,-, 602135 Satellite W-chromosome 585 chrUn_NT_464433v1 14506 15329 GGXHOI 409 - 14506 15329 0 2 307,495, 0,328, -,-, 602137 Satellite W-chromosome 585 chrUn_NT_464433v1 15363 16496 GGXHOI 410 - 15363 16496 0 2 692,422, 0,711, -,-, 602139 Satellite W-chromosome 585 chrUn_NT_464433v1 17371 19344 GGXHOI 408 - 17371 19344 0 3 692,422,823, 0,711,1150, -,-,-, 602143 Satellite W-chromosome 585 chrUn_NT_464433v1 19378 20511 GGXHOI 410 - 19378 20511 0 2 692,422, 0,711, -,-, 602145 Satellite W-chromosome 585 chrUn_NT_464435v1 319 2900 GGXHOI 474 + 319 2900 0 6 273,203,542,177,223,144, 0,519,1025,1765,2186,2437, +,+,+,+,+,+, 602183 Satellite W-chromosome 585 chrUn_NT_464435v1 6451 7597 GGXHOI 534 + 6451 7597 0 2 801,20, 0,1126, +,+, 602195 Satellite W-chromosome 585 chrUn_NT_464435v1 8282 8823 GGXHOI 584 + 8282 8823 0 2 55,19, 0,522, +,+, 602198 Satellite W-chromosome 585 chrUn_NT_464435v1 8901 10130 GGXHOI 586 + 8901 10130 0 3 272,367,26, 0,521,1203, +,+,+, 602200 Satellite W-chromosome 585 chrUn_NT_464435v1 10200 11419 GGXHOI 594 + 10200 11419 0 3 273,364,19, 0,522,1200, +,+,+, 602203 Satellite W-chromosome 585 chrUn_NT_464435v1 11496 12725 GGXHOI 602 + 11496 12725 0 3 380,318,26, 0,571,1203, +,+,+, 602206 Satellite W-chromosome 585 chrUn_NT_464435v1 15398 19223 GGXHOI 573 + 15398 19223 0 7 275,367,363,192,154,987,19, 0,524,1214,1826,2065,2505,3806, +,+,+,+,+,+,+, 602213 Satellite W-chromosome 585 chrUn_NT_464435v1 19300 21823 GGXHOI 576 + 19300 21823 0 5 275,367,804,125,19, 0,524,1214,2065,2504, +,+,+,+,+, 602219 Satellite W-chromosome 585 chrUn_NT_464435v1 21901 24421 GGXHOI 558 + 21901 24421 0 5 276,137,362,317,19, 0,525,1212,1871,2501, +,+,+,+,+, 602223 Satellite W-chromosome 585 chrUn_NT_464435v1 24498 27008 GGXHOI 543 + 24498 27008 0 4 275,368,814,443, 0,524,1207,2067, +,+,+,+, 602228 Satellite W-chromosome 585 chrUn_NT_464436v1 480 1086 (CAAGG)n 514 + 480 1086 0 2 378,193, 0,413, +,+, 602234 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 1447 1949 (CCTTG)n 540 + 1447 1949 0 2 277,178, 0,324, +,+, 602237 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 2969 3782 (CCTTG)n 520 + 2969 3782 0 2 360,432, 0,381, +,+, 602241 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 4826 5277 (CCTTG)n 511 + 4826 5277 0 2 241,189, 0,262, +,+, 602244 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 6123 6537 (CAAGG)n 512 + 6123 6537 0 2 211,184, 0,230, +,+, 602249 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 6667 7475 (CCTTG)n 514 + 6667 7475 0 2 384,244, 0,564, +,+, 602251 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 8853 9356 (CCTTG)n 543 + 8853 9356 0 2 259,237, 0,266, +,+, 602258 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 9756 10430 (CAAGG)n 558 + 9756 10430 0 2 251,234, 0,440, +,+, 602261 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 10735 11238 (CCTTG)n 543 + 10735 11238 0 2 259,237, 0,266, +,+, 602265 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 12312 13121 (CCTTG)n 535 + 12312 13121 0 2 286,503, 0,306, +,+, 602269 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 14194 15003 (CCTTG)n 535 + 14194 15003 0 2 286,503, 0,306, +,+, 602273 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 16076 16885 (CCTTG)n 535 + 16076 16885 0 2 286,503, 0,306, +,+, 602277 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 17958 18767 (CCTTG)n 535 + 17958 18767 0 2 286,503, 0,306, +,+, 602281 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 19840 20649 (CCTTG)n 535 + 19840 20649 0 2 286,503, 0,306, +,+, 602285 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 21722 22531 (CCTTG)n 535 + 21722 22531 0 2 286,503, 0,306, +,+, 602289 Simple_repeat Simple_repeat 585 chrUn_NT_464436v1 26951 27363 (CCTTG)n 412 + 26951 27363 0 2 233,163, 0,249, +,+, 602301 Simple_repeat Simple_repeat 585 chrUn_NT_464437v1 1792 3486 GGERVL-A-int 630 + 1792 3486 0 2 439,1255, 0,439, +,+, 602303 LTR ERVL 585 chrUn_NT_464437v1 20188 22626 GGLTR7-int 577 + 20188 22626 0 2 331,785, 0,1653, +,+, 602317 LTR ERV1 585 chrUn_NT_464437v1 22638 25038 GGERV10_LTR 848 - 22638 25038 0 2 38,41, 0,2359, -,-, 602320 LTR ERVL 585 chrUn_NT_464437v1 22802 24996 GGLTR10D-int 884 - 22802 24996 0 2 358,1833, 0,361, -,-, 602321 LTR ERVK 585 chrUn_NT_464437v1 25035 26149 (CGAGG)n 514 + 25035 26149 0 2 206,850, 0,264, +,+, 602322 Simple_repeat Simple_repeat 585 chrUn_NT_464437v1 26512 27453 (CGAGG)n 498 + 26512 27453 0 5 173,183,184,90,245, 0,184,383,582,696, +,+,+,+,+, 602326 Simple_repeat Simple_repeat 585 chrUn_NT_464438v1 3838 6537 GGXHOI 359 - 3838 6537 0 3 1605,267,738, 0,1632,1961, -,-,-, 602333 Satellite W-chromosome 585 chrUn_NT_464438v1 8965 10412 GGXHOI 383 - 8965 10412 0 3 692,267,399, 0,719,1048, -,-,-, 602338 Satellite W-chromosome 585 chrUn_NT_464438v1 10445 12235 GGXHOI 328 - 10445 12235 0 2 520,1252, 0,538, -,-, 602340 Satellite W-chromosome 585 chrUn_NT_464438v1 13178 14621 GGXHOI 382 - 13178 14621 0 3 689,230,399, 0,752,1044, -,-,-, 602343 Satellite W-chromosome 585 chrUn_NT_464438v1 15238 16445 GGXHOI 350 - 15238 16445 0 2 525,654, 0,553, -,-, 602346 Satellite W-chromosome 585 chrUn_NT_464438v1 18055 20059 GGXHOI 375 - 18055 20059 0 2 538,1437, 0,567, -,-, 602349 Satellite W-chromosome 585 chrUn_NT_464438v1 23756 27365 GGXHOI 379 - 23756 27365 0 4 736,1600,590,525, 0,794,2449,3084, -,-,-,-, 602358 Satellite W-chromosome 585 chrUn_NT_464439v1 161 525 GGLTR7A 806 - 161 525 0 2 250,114, 0,250, -,-, 602360 LTR ERV1 585 chrUn_NT_464439v1 2101 2629 (CAAGG)n 578 + 2101 2629 0 2 251,96, 0,432, +,+, 602367 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 12690 13841 GGLTR7-int 305 - 12690 13841 0 3 296,240,100, 0,783,1051, -,-,-, 602380 LTR ERV1 585 chrUn_NT_464439v1 19142 19820 (CAGGC)n 564 + 19142 19820 0 2 234,44, 0,634, +,+, 602386 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 19883 20162 (CAGGC)n 508 + 19883 20162 0 2 70,27, 0,252, +,+, 602389 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 21416 22421 (CAGGC)n 532 + 21416 22421 0 2 364,451, 0,554, +,+, 602399 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 22015 22685 (CAAGG)n 590 + 22015 22685 0 2 475,195, 0,475, +,+, 602401 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 22795 23765 (CAAGG)n 644 + 22795 23765 0 2 107,397, 0,573, +,+, 602404 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 23785 24823 (CAAGG)n 654 + 23785 24823 0 3 187,88,336, 0,440,702, +,+,+, 602409 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 25930 26804 (CAAGG)n 666 + 25930 26804 0 2 469,378, 0,496, +,+, 602419 Simple_repeat Simple_repeat 585 chrUn_NT_464439v1 26822 27429 (CAAGG)n 562 + 26822 27429 0 2 269,155, 0,452, +,+, 602421 Simple_repeat Simple_repeat 585 chrUn_NT_464440v1 6252 12427 GGXHOI 394 - 6252 12427 0 5 1594,1485,615,1927,423, 0,1634,3144,3800,5752, -,-,-,-,-, 602424 Satellite W-chromosome 585 chrUn_NT_464440v1 13848 14716 GGXHOI 354 - 13848 14716 0 2 150,688, 0,180, -,-, 602427 Satellite W-chromosome 585 chrUn_NT_464440v1 15244 22103 GGXHOI 367 - 15244 22103 0 10 319,601,424,626,318,1595,480,593,818,754, 0,358,1006,1448,2137,2497,4151,4657,5262,6105, -,-,-,-,-,-,-,-,-,-, 602429 Satellite W-chromosome 585 chrUn_NT_464440v1 22809 25816 GGXHOI 380 - 22809 25816 0 4 690,1041,861,342, 0,713,1779,2665, -,-,-,-, 602431 Satellite W-chromosome 585 chrUn_NT_464442v1 4338 12974 GGXHOI 411 + 4338 12974 0 6 1452,619,625,619,625,4523, 0,1493,2137,2803,3447,4113, +,+,+,+,+,+, 602438 Satellite W-chromosome 585 chrUn_NT_464442v1 13050 17847 GGXHOI 406 + 13050 17847 0 5 1659,404,1690,785,133, 0,1688,2117,3859,4664, +,+,+,+,+, 602439 Satellite W-chromosome 585 chrUn_NT_464442v1 18171 18831 GGXHOI 324 + 18171 18831 0 2 253,348, 0,312, +,+, 602440 Satellite W-chromosome 585 chrUn_NT_464442v1 18968 21570 GGXHOI 373 + 18968 21570 0 3 485,1671,398, 0,510,2204, +,+,+, 602441 Satellite W-chromosome 585 chrUn_NT_464442v1 21637 22140 GGXHOI 349 + 21637 22140 0 2 310,139, 0,364, +,+, 602442 Satellite W-chromosome 585 chrUn_NT_464442v1 22309 25979 GGXHOI 369 + 22309 25979 0 3 2516,985,91, 0,2574,3579, +,+,+, 602443 Satellite W-chromosome 585 chrUn_NT_464443v1 3591 4986 GGLTR7-int 282 - 3591 4986 0 3 282,313,100, 0,980,1295, -,-,-, 602448 LTR ERV1 585 chrUn_NT_464443v1 5647 7985 GGERVL-B-int 688 - 5647 7985 0 2 504,1834, 0,504, -,-, 602450 LTR ERVL 585 chrUn_NT_464443v1 10044 10422 (CAAGG)n 577 + 10044 10422 0 2 182,196, 0,182, +,+, 602454 Simple_repeat Simple_repeat 585 chrUn_NT_464443v1 11188 11628 (CAGGC)n 504 + 11188 11628 0 3 25,12,48, 0,189,392, +,+,+, 602460 Simple_repeat Simple_repeat 585 chrUn_NT_464443v1 20774 22170 GGLTR7-int 315 - 20774 22170 0 3 279,260,101, 0,1033,1295, -,-,-, 602479 LTR ERV1 585 chrUn_NT_464443v1 22906 25751 GGERVL-B-int 701 - 22906 25751 0 2 913,1932, 0,913, -,-, 602481 LTR ERVL 585 chrUn_NT_464444v1 12045 12715 (CCTTG)n 611 + 12045 12715 0 3 212,205,253, 0,212,417, +,+,+, 602495 Simple_repeat Simple_repeat 585 chrUn_NT_464444v1 17728 20184 GGERVL-B-int 721 + 17728 20184 0 3 317,1223,916, 0,317,1540, +,+,+, 602513 LTR ERVL 585 chrUn_NT_464444v1 20922 22317 GGLTR7-int 349 + 20922 22317 0 3 100,233,281, 0,102,1114, +,+,+, 602515 LTR ERV1 585 chrUn_NT_464445v1 84 982 (CCTCG)n 518 + 84 982 0 4 191,293,182,177, 0,203,521,721, +,+,+,+, 602518 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 2350 2962 (CCTCG)n 526 + 2350 2962 0 2 226,368, 0,244, +,+, 602522 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 3526 4176 (CCTCG)n 475 + 3526 4176 0 3 143,180,282, 0,164,368, +,+,+, 602526 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 4266 4877 (CCTCG)n 519 + 4266 4877 0 2 421,179, 0,432, +,+, 602527 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 6336 6710 (CCTCG)n 549 + 6336 6710 0 2 177,178, 0,196, +,+, 602532 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 6919 8036 (CCTCG)n 525 + 6919 8036 0 3 178,513,351, 0,222,766, +,+,+, 602534 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 9191 10009 (CCTCG)n 527 + 9191 10009 0 4 182,183,175,183, 0,194,425,635, +,+,+,+, 602537 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 10200 10596 (CCTCG)n 480 + 10200 10596 0 2 187,180, 0,216, +,+, 602539 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 10685 10983 (CCTCG)n 562 + 10685 10983 0 2 89,29, 0,269, +,+, 602541 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 11198 11883 (CCTCG)n 526 + 11198 11883 0 2 266,241, 0,444, +,+, 602544 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 12134 12580 (CCTCG)n 532 + 12134 12580 0 2 122,14, 0,432, +,+, 602548 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 12656 13137 (CCTCG)n 565 + 12656 13137 0 2 272,180, 0,301, +,+, 602552 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 15799 16599 (CCTCG)n 581 + 15799 16599 0 4 179,178,177,179, 0,199,403,621, +,+,+,+, 602564 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 16922 17301 (CCTCG)n 527 + 16922 17301 0 2 193,175, 0,204, +,+, 602567 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 18097 18699 (CCTCG)n 529 + 18097 18699 0 2 188,362, 0,240, +,+, 602571 Simple_repeat Simple_repeat 585 chrUn_NT_464445v1 19010 21430 GGERV10_LTR 874 + 19010 21430 0 2 41,38, 0,2382, +,+, 602574 LTR ERVL 585 chrUn_NT_464445v1 19052 21267 GGLTR10D-int 921 + 19052 21267 0 2 1849,363, 0,1852, +,+, 602575 LTR ERVK 585 chrUn_NT_464445v1 21442 23906 GGLTR7-int 590 - 21442 23906 0 2 793,338, 0,2126, -,-, 602576 LTR ERV1 585 chrUn_NT_464447v1 6059 7563 GGXHOI 325 - 6059 7563 0 2 352,1134, 0,370, -,-, 602616 Satellite W-chromosome 585 chrUn_NT_464447v1 7705 8500 GGXHOI 383 - 7705 8500 0 2 547,232, 0,563, -,-, 602617 Satellite W-chromosome 585 chrUn_NT_464447v1 8601 10055 GGXHOI 401 - 8601 10055 0 3 264,1083,71, 0,289,1383, -,-,-, 602618 Satellite W-chromosome 585 chrUn_NT_464447v1 11229 12469 GGXHOI 380 - 11229 12469 0 2 665,528, 0,712, -,-, 602620 Satellite W-chromosome 585 chrUn_NT_464447v1 12533 18675 GGXHOI 392 - 12533 18675 0 4 2021,886,1732,1449, 0,2039,2943,4693, -,-,-,-, 602621 Satellite W-chromosome 585 chrUn_NT_464447v1 18739 19283 GGXHOI 333 - 18739 19283 0 3 137,183,123, 0,190,421, -,-,-, 602622 Satellite W-chromosome 585 chrUn_NT_464447v1 20545 21351 GGXHOI 394 - 20545 21351 0 2 165,623, 0,183, -,-, 602624 Satellite W-chromosome 585 chrUn_NT_464447v1 21773 22615 GGXHOI 353 - 21773 22615 0 2 495,329, 0,513, -,-, 602626 Satellite W-chromosome 585 chrUn_NT_464447v1 22728 23449 GGXHOI 375 - 22728 23449 0 2 434,266, 0,455, -,-, 602627 Satellite W-chromosome 585 chrUn_NT_464447v1 23514 25170 GGXHOI 343 - 23514 25170 0 2 931,709, 0,947, -,-, 602628 Satellite W-chromosome 585 chrUn_NT_464448v1 747 19678 GGXHOI 541 - 747 19678 0 33 182,299,186,19,247,191,247,194,299,192,369,194,247,192,246,194,248,222,246,194,247,194,246,194,247,194,247,194,297,194,247,194,207, 0,609,1204,1407,1868,2436,3074,3644,4229,4849,5361,6053,6690,7259,7898,8467,9107,9647,10305,10873,11509,12079,12720,13289,13930,14501,15142,15712,16303,16923,17564,18134,18724, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 602632 Satellite W-chromosome 585 chrUn_NT_464448v1 19753 21162 GGXHOI 524 - 19753 21162 0 3 19,223,566, 0,302,843, -,-,-, 602664 Satellite W-chromosome 585 chrUn_NT_464448v1 21204 25703 GGXHOI 546 - 21204 25703 0 8 235,247,193,246,191,247,186,206, 0,724,1295,1933,2501,3138,3707,4293, -,-,-,-,-,-,-,-, 602668 Satellite W-chromosome 585 chrUn_NT_464448v1 26108 27243 GGXHOI 505 - 26108 27243 0 3 191,287,277, 0,511,858, -,-,-, 602677 Satellite W-chromosome 585 chrUn_NT_464449v1 4768 6738 CR1-B2 609 + 4768 6738 0 5 53,60,59,60,59, 0,181,497,1725,1911, +,+,+,+,+, 602681 LINE CR1 585 chrUn_NT_464449v1 7098 8046 CR1-B2 571 + 7098 8046 0 4 60,64,60,61, 0,565,793,887, +,+,+,+, 602704 LINE CR1 585 chrUn_NT_464449v1 7517 7630 CR1-C3 515 + 7517 7630 0 2 62,51, 0,62, +,+, 602709 LINE CR1 585 chrUn_NT_464449v1 14055 14903 CR1-C4 512 - 14055 14903 0 2 60,54, 0,794, -,-, 602732 LINE CR1 585 chrUn_NT_464449v1 16396 17258 CR1-C4 458 - 16396 17258 0 2 60,54, 0,808, -,-, 602745 LINE CR1 585 chrUn_NT_464449v1 17448 17552 CR1-E 516 - 17448 17552 0 2 54,50, 0,54, -,-, 602752 LINE CR1 585 chrUn_NT_464453v1 16716 16798 (G)n 962 + 16716 16798 0 2 24,27, 0,55, +,+, 602810 Simple_repeat Simple_repeat 585 chrUn_NT_464454v1 921 1082 (ACCCATAGGG)n 338 + 921 1082 0 2 44,68, 0,93, +,+, 602824 Satellite Satellite 585 chrUn_NT_464454v1 6082 7400 GGLTR12C 292 - 6082 7400 0 2 148,257, 0,1061, -,-, 602835 LTR ERVL 585 chrUn_NT_464454v1 8379 8470 CR1-C4 626 + 8379 8470 0 2 48,43, 0,48, +,+, 602841 LINE CR1 585 chrUn_NT_464454v1 8943 9034 CR1-C4 668 + 8943 9034 0 2 48,43, 0,48, +,+, 602845 LINE CR1 585 chrUn_NT_464454v1 17281 17376 CR1-B 595 - 17281 17376 0 2 51,44, 0,51, -,-, 602866 LINE CR1 585 chrUn_NT_464455v1 5451 7705 GGXHOI 331 + 5451 7705 0 3 248,95,1813, 0,293,441, +,+,+, 602882 Satellite W-chromosome 585 chrUn_NT_464455v1 9326 25755 GGXHOI 378 + 9326 25755 0 6 4106,1434,1436,1436,4384,3425, 0,4146,5622,7100,8578,13004, +,+,+,+,+,+, 602885 Satellite W-chromosome 585 chrUn_NT_464455v1 26379 26826 GGXHOI 366 + 26379 26826 0 2 297,136, 0,311, +,+, 602887 Satellite W-chromosome 585 chrUn_NT_464456v1 4942 6278 GGXHOI 376 + 4942 6278 0 2 350,939, 0,397, +,+, 602896 Satellite W-chromosome 585 chrUn_NT_464456v1 6747 10072 GGXHOI 367 + 6747 10072 0 5 1161,144,268,1043,602, 0,1178,1339,1622,2723, +,+,+,+,+, 602898 Satellite W-chromosome 585 chrUn_NT_464456v1 11476 12085 GGXHOI 375 + 11476 12085 0 2 446,146, 0,463, +,+, 602902 Satellite W-chromosome 585 chrUn_NT_464456v1 12225 14257 GGXHOI 382 + 12225 14257 0 3 1705,146,147, 0,1722,1885, +,+,+, 602903 Satellite W-chromosome 585 chrUn_NT_464456v1 14642 16823 GGXHOI 391 + 14642 16823 0 2 435,1729, 0,452, +,+, 602904 Satellite W-chromosome 585 chrUn_NT_464456v1 16888 17801 GGXHOI 381 + 16888 17801 0 3 586,146,147, 0,603,766, +,+,+, 602905 Satellite W-chromosome 585 chrUn_NT_464456v1 17941 20995 GGXHOI 394 + 17941 20995 0 3 433,2114,432, 0,452,2622, +,+,+, 602906 Satellite W-chromosome 585 chrUn_NT_464456v1 21462 22952 GGXHOI 393 + 21462 22952 0 3 760,346,352, 0,776,1138, +,+,+, 602908 Satellite W-chromosome 585 chrUn_NT_464456v1 23664 26452 GGXHOI 350 + 23664 26452 0 3 1659,793,262, 0,1716,2526, +,+,+, 602910 Satellite W-chromosome 585 chrUn_NT_464457v1 1207 2735 (CCTCG)n 492 + 1207 2735 0 3 217,142,806, 0,402,722, +,+,+, 602915 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 2829 4189 (CCTCG)n 525 + 2829 4189 0 3 375,386,395, 0,401,965, +,+,+, 602918 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 4268 7040 (CCTCG)n 523 + 4268 7040 0 6 918,22,463,351,494,277, 0,1094,1135,1618,2001,2495, +,+,+,+,+,+, 602921 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 7971 8601 (CCTCG)n 468 + 7971 8601 0 2 259,112, 0,518, +,+, 602925 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 9861 10572 (CCTCG)n 551 + 9861 10572 0 2 276,422, 0,289, +,+, 602931 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 10875 11796 (CCTCG)n 530 + 10875 11796 0 2 502,358, 0,563, +,+, 602933 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 11906 12417 (CCTCG)n 613 + 11906 12417 0 3 179,106,25, 0,199,486, +,+,+, 602934 Simple_repeat Simple_repeat 585 chrUn_NT_464457v1 12414 14839 GGERV10_LTR 874 + 12414 14839 0 2 41,38, 0,2387, +,+, 602936 LTR ERVL 585 chrUn_NT_464457v1 12456 14673 GGLTR10D-int 945 + 12456 14673 0 2 1851,363, 0,1854, +,+, 602937 LTR ERVK 585 chrUn_NT_464457v1 14851 17303 GGLTR7-int 599 - 14851 17303 0 2 793,332, 0,2120, -,-, 602938 LTR ERV1 585 chrUn_NT_464457v1 21065 21641 G-rich 424 + 21065 21641 0 2 37,481, 0,95, +,+, 602944 Low_complexity Low_complexity 585 chrUn_NT_464458v1 5162 8262 GGXHOI 343 - 5162 8262 0 4 511,247,1932,353, 0,535,798,2747, -,-,-,-, 602952 Satellite W-chromosome 585 chrUn_NT_464458v1 8326 19958 GGXHOI 409 - 8326 19958 0 6 275,2519,3794,334,3514,1032, 0,290,2851,6687,7067,10600, -,-,-,-,-,-, 602953 Satellite W-chromosome 585 chrUn_NT_464458v1 21256 23906 GGXHOI 332 - 21256 23906 0 2 1412,1178, 0,1472, -,-, 602956 Satellite W-chromosome 585 chrUn_NT_464458v1 24160 27000 GGXHOI 398 - 24160 27000 0 2 2223,602, 0,2238, -,-, 602957 Satellite W-chromosome 585 chrUn_NT_464460v1 24462 24601 GA-rich 376 + 24462 24601 0 2 42,42, 0,97, +,+, 603040 Low_complexity Low_complexity 585 chrUn_NT_464461v1 13017 14041 CR1-B2 580 - 13017 14041 0 2 796,225, 0,799, -,-, 603059 LINE CR1 585 chrUn_NT_464461v1 19149 19457 CR1-X 515 + 19149 19457 0 3 170,78,57, 0,170,251, +,+,+, 603060 LINE CR1 585 chrUn_NT_464461v1 24664 25787 CR1-B2 695 + 24664 25787 0 2 226,894, 0,229, +,+, 603063 LINE CR1 585 chrUn_NT_464462v1 1557 2235 GGXHOI 382 - 1557 2235 0 2 350,312, 0,366, -,-, 603069 Satellite W-chromosome 585 chrUn_NT_464462v1 2827 3383 GGXHOI 367 - 2827 3383 0 2 268,271, 0,285, -,-, 603071 Satellite W-chromosome 585 chrUn_NT_464462v1 4424 5426 GGXHOI 348 - 4424 5426 0 2 554,432, 0,570, -,-, 603073 Satellite W-chromosome 585 chrUn_NT_464462v1 5568 6573 GGXHOI 350 - 5568 6573 0 2 555,434, 0,571, -,-, 603074 Satellite W-chromosome 585 chrUn_NT_464462v1 6836 9905 GGXHOI 357 - 6836 9905 0 4 269,269,1376,1060, 0,286,571,2009, -,-,-,-, 603075 Satellite W-chromosome 585 chrUn_NT_464462v1 11588 12593 GGXHOI 357 - 11588 12593 0 2 555,434, 0,571, -,-, 603077 Satellite W-chromosome 585 chrUn_NT_464462v1 12856 13742 GGXHOI 346 - 12856 13742 0 2 269,600, 0,286, -,-, 603078 Satellite W-chromosome 585 chrUn_NT_464462v1 14048 17880 GGXHOI 336 - 14048 17880 0 3 761,266,2727, 0,823,1105, -,-,-, 603079 Satellite W-chromosome 585 chrUn_NT_464462v1 18143 21136 GGXHOI 344 - 18143 21136 0 4 268,971,761,856, 0,285,1315,2137, -,-,-,-, 603080 Satellite W-chromosome 585 chrUn_NT_464462v1 21953 22962 GGXHOI 361 - 21953 22962 0 3 268,271,421, 0,285,588, -,-,-, 603082 Satellite W-chromosome 585 chrUn_NT_464462v1 23268 25152 GGXHOI 349 - 23268 25152 0 3 761,266,779, 0,823,1105, -,-,-, 603083 Satellite W-chromosome 585 chrUn_NT_464464v1 1256 3249 GGLTR7-int 650 - 1256 3249 0 2 898,1013, 0,980, -,-, 603098 LTR ERV1 585 chrUn_NT_464464v1 3243 4073 GGERVL-A-int 589 + 3243 4073 0 2 581,249, 0,581, +,+, 603099 LTR ERVL 585 chrUn_NT_464464v1 4075 4900 GGERVL18-LTR 665 - 4075 4900 0 2 248,83, 0,742, -,-, 603100 LTR ERVL 585 chrUn_NT_464464v1 4888 6303 GGLTR3C2 418 - 4888 6303 0 2 914,500, 0,915, -,-, 603102 LTR ERVL 585 chrUn_NT_464464v1 6401 7860 GGERV22_LTR 606 - 6401 7860 0 3 296,55,500, 0,900,959, -,-,-, 603103 LTR ERVL 585 chrUn_NT_464464v1 8813 16085 GGERVK1-int 983 - 8813 16085 0 4 241,5032,1744,241, 0,241,5287,7031, -,-,-,-, 603108 LTR ERVK 585 chrUn_NT_464464v1 16310 18948 GGLTR7-int 618 + 16310 18948 0 2 1658,898, 0,1740, +,+, 603109 LTR ERV1 585 chrUn_NT_464464v1 19463 23131 ENS1-int 846 + 19463 23131 0 2 894,2773, 0,895, +,+, 603110 LTR ERVL 585 chrUn_NT_464464v1 23142 26963 GGERV20_I-int 950 + 23142 26963 0 3 1161,2628,32, 0,1161,3789, +,+,+, 603111 LTR ERVL 585 chrUn_NT_464465v1 1998 3067 GGXHOI 492 + 1998 3067 0 3 570,285,29, 0,587,1040, +,+,+, 603114 Satellite W-chromosome 585 chrUn_NT_464465v1 4252 5382 GGXHOI 444 + 4252 5382 0 2 687,412, 0,718, +,+, 603117 Satellite W-chromosome 585 chrUn_NT_464465v1 5449 6507 GGXHOI 524 + 5449 6507 0 3 282,283,19, 0,475,1039, +,+,+, 603118 Satellite W-chromosome 585 chrUn_NT_464465v1 7082 7624 GGXHOI 402 + 7082 7624 0 3 131,210,123, 0,192,419, +,+,+, 603123 Satellite W-chromosome 585 chrUn_NT_464465v1 10447 11117 GGXHOI 580 + 10447 11117 0 2 336,131, 0,539, +,+, 603129 Satellite W-chromosome 585 chrUn_NT_464465v1 11665 12083 GGXHOI 621 + 11665 12083 0 2 168,191, 0,227, +,+, 603133 Satellite W-chromosome 585 chrUn_NT_464465v1 12125 13547 GGXHOI 549 + 12125 13547 0 3 925,123,129, 0,968,1293, +,+,+, 603135 Satellite W-chromosome 585 chrUn_NT_464465v1 15344 17970 GGXHOI 540 + 15344 17970 0 6 39,368,238,297,127,129, 0,332,937,1481,2029,2497, +,+,+,+,+,+, 603139 Satellite W-chromosome 585 chrUn_NT_464465v1 19212 20110 GGXHOI 405 + 19212 20110 0 3 205,211,373, 0,262,525, +,+,+, 603147 Satellite W-chromosome 585 chrUn_NT_464465v1 21404 23599 GGXHOI 545 + 21404 23599 0 5 284,910,70,239,39, 0,481,1402,1710,2156, +,+,+,+,+, 603150 Satellite W-chromosome 585 chrUn_NT_464465v1 23860 25635 GGXHOI 559 + 23860 25635 0 3 277,713,447, 0,598,1328, +,+,+, 603154 Satellite W-chromosome 585 chrUn_NT_464466v1 4835 11140 GGLTR3F1 813 + 4835 11140 0 3 478,5336,488, 0,481,5817, +,+,+, 603159 LTR ERVL 585 chrUn_NT_464466v1 19807 22029 CR1-E 658 + 19807 22029 0 2 620,1580, 0,642, +,+, 603164 LINE CR1 585 chrUn_NT_464466v1 22029 22532 GGLTR3F2 896 + 22029 22532 0 2 236,202, 0,301, +,+, 603165 LTR ERVL 585 chrUn_NT_464466v1 25502 26885 GGLTR5B 649 + 25502 26885 0 2 436,139, 0,1244, +,+, 603170 LTR ERVL 585 chrUn_NT_464466v1 25933 26746 GGLTR3C1 673 - 25933 26746 0 2 146,370, 0,443, -,-, 603171 LTR ERVL 585 chrUn_NT_464467v1 321 1254 (CCTCG)n 598 + 321 1254 0 2 185,707, 0,226, +,+, 603176 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 1764 3836 (CCTCG)n 483 + 1764 3836 0 4 166,581,765,505, 0,181,782,1567, +,+,+,+, 603178 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 3881 4744 (CCTCG)n 522 + 3881 4744 0 2 657,179, 0,684, +,+, 603180 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 4854 6385 (CCTCG)n 556 + 4854 6385 0 2 297,1051, 0,480, +,+, 603183 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 6466 7516 (CCTCG)n 573 + 6466 7516 0 3 221,550,30, 0,243,1020, +,+,+, 603186 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 7608 8337 (CCTCG)n 538 + 7608 8337 0 2 416,137, 0,592, +,+, 603188 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 10122 10915 (CCTCG)n 574 + 10122 10915 0 3 364,100,126, 0,391,667, +,+,+, 603193 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 11005 12470 (CCTCG)n 542 + 11005 12470 0 5 184,177,379,183,477, 0,198,392,790,988, +,+,+,+,+, 603195 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 13463 14256 (CCTCG)n 574 + 13463 14256 0 3 364,100,126, 0,391,667, +,+,+, 603199 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 14346 15972 (CCTCG)n 536 + 14346 15972 0 5 184,177,379,183,638, 0,198,392,790,988, +,+,+,+,+, 603201 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 18342 19189 (CCTCG)n 536 + 18342 19189 0 3 150,301,40, 0,329,807, +,+,+, 603207 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 19434 20359 (CCTCG)n 528 + 19434 20359 0 3 142,386,179, 0,319,746, +,+,+, 603211 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 20514 20802 (CCTCG)n 493 + 20514 20802 0 2 178,99, 0,189, +,+, 603214 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 20901 22063 (CCTCG)n 520 + 20901 22063 0 4 246,259,86,353, 0,257,693,809, +,+,+,+, 603216 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 22515 23693 (CCTCG)n 549 + 22515 23693 0 4 320,65,293,121, 0,500,585,1057, +,+,+,+, 603221 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 23760 26148 (CCTCG)n 525 + 23760 26148 0 6 625,331,384,186,178,561, 0,636,988,1399,1619,1827, +,+,+,+,+,+, 603225 Simple_repeat Simple_repeat 585 chrUn_NT_464467v1 26163 26818 (CCTCG)n 492 + 26163 26818 0 2 286,347, 0,308, +,+, 603227 Simple_repeat Simple_repeat 585 chrUn_NT_464468v1 4550 5925 GGXHOI 340 - 4550 5925 0 2 1090,264, 0,1111, -,-, 603232 Satellite W-chromosome 585 chrUn_NT_464468v1 9502 10878 GGXHOI 332 - 9502 10878 0 2 1090,265, 0,1111, -,-, 603237 Satellite W-chromosome 585 chrUn_NT_464468v1 11756 12557 GGXHOI 367 - 11756 12557 0 2 475,264, 0,537, -,-, 603239 Satellite W-chromosome 585 chrUn_NT_464468v1 13969 16081 GGXHOI 364 - 13969 16081 0 2 1415,639, 0,1473, -,-, 603242 Satellite W-chromosome 585 chrUn_NT_464468v1 19871 21576 GGXHOI 372 - 19871 21576 0 2 1090,557, 0,1148, -,-, 603249 Satellite W-chromosome 585 chrUn_NT_464468v1 22783 24486 GGXHOI 370 - 22783 24486 0 2 1090,555, 0,1148, -,-, 603252 Satellite W-chromosome 585 chrUn_NT_464469v1 5572 6238 ENS1-int 339 - 5572 6238 0 2 207,130, 0,536, -,-, 603257 LTR ERVL 585 chrUn_NT_464469v1 21441 22108 ENS1-int 309 - 21441 22108 0 2 104,147, 0,520, -,-, 603268 LTR ERVL 585 chrUn_NT_464469v1 26451 26834 CR1-C3 600 + 26451 26834 0 2 78,120, 0,263, +,+, 603275 LINE CR1 585 chrUn_NT_464470v1 11884 14467 CR1-D 610 + 11884 14467 0 2 996,1587, 0,996, +,+, 603282 LINE CR1 585 chrUn_NT_464470v1 24414 25052 Z-REP 537 + 24414 25052 0 2 91,323, 0,315, +,+, 603292 Satellite macro 585 chrUn_NT_464471v1 525 2201 GGXHOI 456 + 525 2201 0 5 103,324,123,99,212, 0,313,881,1043,1464, +,+,+,+,+, 603295 Satellite W-chromosome 585 chrUn_NT_464471v1 2293 9140 GGXHOI 566 + 2293 9140 0 3 369,16,536, 0,3111,6311, +,+,+, 603299 Satellite W-chromosome 585 chrUn_NT_464471v1 9184 13043 GGXHOI 564 + 9184 13043 0 4 1598,637,327,409, 0,1917,2873,3450, +,+,+,+, 603303 Satellite W-chromosome 585 chrUn_NT_464471v1 13087 15524 GGXHOI 556 + 13087 15524 0 2 773,1257, 0,1180, +,+, 603306 Satellite W-chromosome 585 chrUn_NT_464471v1 14364 18106 Sat-CR1_GG 168 + 14364 18106 0 2 1205,1659, 0,2083, +,+, 603308 Satellite Satellite 585 chrUn_NT_464471v1 18334 20530 GGXHOI 552 + 18334 20530 0 3 639,460,284, 0,1016,1912, +,+,+, 603312 Satellite W-chromosome 585 chrUn_NT_464471v1 20753 26767 GGXHOI 522 + 20753 26767 0 6 773,153,91,267,254,597, 0,3365,3558,4211,5122,5417, +,+,+,+,+,+, 603316 Satellite W-chromosome 585 chrUn_NT_464472v1 1378 3140 GGXHOI 347 - 1378 3140 0 3 394,421,822, 0,456,940, -,-,-, 603322 Satellite W-chromosome 585 chrUn_NT_464472v1 10767 12656 GGXHOI 358 - 10767 12656 0 2 972,856, 0,1033, -,-, 603333 Satellite W-chromosome 585 chrUn_NT_464472v1 12887 14639 GGXHOI 358 - 12887 14639 0 2 771,929, 0,823, -,-, 603334 Satellite W-chromosome 585 chrUn_NT_464472v1 17295 19641 GGXHOI 377 - 17295 19641 0 4 515,509,515,624, 0,576,1145,1722, -,-,-,-, 603339 Satellite W-chromosome 585 chrUn_NT_464472v1 20926 21555 (CCTTG)n 543 + 20926 21555 0 2 250,353, 0,276, +,+, 603344 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 22154 22597 (CAAGG)n 500 + 22154 22597 0 2 223,220, 0,223, +,+, 603350 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 22661 23568 (CCTTG)n 538 + 22661 23568 0 3 85,26,602, 0,275,305, +,+,+, 603351 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 23631 23985 (CAGGC)n 307 + 23631 23985 0 2 264,40, 0,314, +,+, 603354 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 23985 24254 (CAAGG)n 654 + 23985 24254 0 2 46,223, 0,46, +,+, 603355 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 24181 24520 (CAGGC)n 312 + 24181 24520 0 2 90,67, 0,272, +,+, 603356 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 24746 25197 (CAAGG)n 524 + 24746 25197 0 2 181,256, 0,195, +,+, 603359 Simple_repeat Simple_repeat 585 chrUn_NT_464472v1 25241 25709 (CCTTG)n 507 + 25241 25709 0 3 60,15,192, 0,249,276, +,+,+, 603360 Simple_repeat Simple_repeat 585 chrUn_NT_464473v1 15781 16120 CR1-X2 309 - 15781 16120 0 2 104,235, 0,104, -,-, 603372 LINE CR1 585 chrUn_NT_464473v1 21168 22257 GGERVL-A-int 82 + 21168 22257 0 2 393,429, 0,660, +,+, 603381 LTR ERVL 585 chrUn_NT_464474v1 15872 16770 (CCTCG)n 631 + 15872 16770 0 2 637,250, 0,648, +,+, 603387 Simple_repeat Simple_repeat 585 chrUn_NT_464474v1 18917 23049 GGXHOI 401 + 18917 23049 0 4 334,643,2102,1004, 0,349,1015,3128, +,+,+,+, 603389 Satellite W-chromosome 585 chrUn_NT_464474v1 24431 25954 GGXHOI 365 - 24431 25954 0 2 992,468, 0,1055, -,-, 603392 Satellite W-chromosome 585 chrUn_NT_464475v1 6076 6206 GA-rich 360 + 6076 6206 0 2 43,49, 0,81, +,+, 603403 Low_complexity Low_complexity 585 chrUn_NT_464475v1 9122 9266 GA-rich 320 + 9122 9266 0 2 43,67, 0,77, +,+, 603410 Low_complexity Low_complexity 585 chrUn_NT_464475v1 10617 10758 GA-rich 288 + 10617 10758 0 2 46,66, 0,75, +,+, 603412 Low_complexity Low_complexity 585 chrUn_NT_464475v1 13611 13752 GA-rich 278 + 13611 13752 0 2 27,44, 0,97, +,+, 603417 Low_complexity Low_complexity 585 chrUn_NT_464475v1 16789 17297 A-rich 586 + 16789 17297 0 2 435,38, 0,470, +,+, 603428 Low_complexity Low_complexity 585 chrUn_NT_464476v1 2795 7243 GGXHOI 397 - 2795 7243 0 3 1479,2375,551, 0,1498,3897, -,-,-, 603457 Satellite W-chromosome 585 chrUn_NT_464476v1 8045 15088 GGXHOI 409 - 8045 15088 0 5 418,826,618,4396,687, 0,431,1302,1945,6356, -,-,-,-,-, 603459 Satellite W-chromosome 585 chrUn_NT_464476v1 15185 26708 GGXHOI 396 - 15185 26708 0 11 3918,1924,356,181,132,200,504,1239,2243,350,116, 0,3975,5915,6292,6490,6654,6900,7452,8736,11025,11407, -,-,-,-,-,-,-,-,-,-,-, 603460 Satellite W-chromosome 585 chrUn_NT_464478v1 9782 10777 CR1-B2 518 - 9782 10777 0 5 85,96,85,93,419, 0,98,206,304,576, -,-,-,-,-, 603474 LINE CR1 585 chrUn_NT_464478v1 21125 23829 (ACCCCATAGGG)n 340 + 21125 23829 0 16 105,118,69,137,110,245,157,295,174,129,165,174,121,116,163,119, 0,126,259,328,482,592,858,1036,1347,1533,1679,1905,2095,2237,2370,2585, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 603483 Satellite Satellite 585 chrUn_NT_464479v1 7023 26700 GGXHOI 432 - 7023 26700 0 12 1725,1334,1429,2026,1552,2065,2419,1346,831,3245,492,1010, 0,1742,3092,4543,6585,8154,10230,12671,14036,14878,18142,18667, -,-,-,-,-,-,-,-,-,-,-,-, 603486 Satellite W-chromosome 585 chrUn_NT_464480v1 812 2146 GGXHOI 375 - 812 2146 0 2 799,472, 0,862, -,-, 603488 Satellite W-chromosome 585 chrUn_NT_464480v1 4543 6520 GGXHOI 363 - 4543 6520 0 3 516,864,471, 0,579,1506, -,-,-, 603492 Satellite W-chromosome 585 chrUn_NT_464480v1 7274 8814 GGXHOI 375 - 7274 8814 0 2 1007,470, 0,1070, -,-, 603494 Satellite W-chromosome 585 chrUn_NT_464480v1 9568 10496 GGXHOI 378 - 9568 10496 0 2 394,476, 0,452, -,-, 603496 Satellite W-chromosome 585 chrUn_NT_464480v1 12756 14296 GGXHOI 377 - 12756 14296 0 2 1006,472, 0,1068, -,-, 603499 Satellite W-chromosome 585 chrUn_NT_464480v1 17717 19702 GGXHOI 370 - 17717 19702 0 3 516,873,471, 0,579,1514, -,-,-, 603505 Satellite W-chromosome 585 chrUn_NT_464481v1 4130 8091 GGXHOI 417 - 4130 8091 0 6 541,766,1191,359,809,150, 0,562,1348,2555,2946,3811, -,-,-,-,-,-, 603514 Satellite W-chromosome 585 chrUn_NT_464481v1 8272 17049 GGXHOI 423 - 8272 17049 0 5 723,3518,2211,620,1584, 0,758,4316,6554,7193, -,-,-,-,-, 603515 Satellite W-chromosome 585 chrUn_NT_464481v1 17146 21011 GGXHOI 389 - 17146 21011 0 3 473,1402,1955, 0,489,1910, -,-,-, 603516 Satellite W-chromosome 585 chrUn_NT_464481v1 21219 24694 GGXHOI 420 - 21219 24694 0 5 626,181,468,869,1157, 0,671,901,1427,2318, -,-,-,-,-, 603517 Satellite W-chromosome 585 chrUn_NT_464482v1 9090 11498 GGLTR3F1 753 + 9090 11498 0 2 494,1912, 0,496, +,+, 603526 LTR ERVL 585 chrUn_NT_464482v1 19618 20090 (TTAGGG)n 644 + 19618 20090 0 2 173,283, 0,189, +,+, 603533 Simple_repeat Simple_repeat 585 chrUn_NT_464482v1 25625 26194 CR1-F 287 + 25625 26194 0 2 216,353, 0,216, +,+, 603540 LINE CR1 585 chrUn_NT_464484v1 2991 4503 GGXHOI 415 - 2991 4503 0 2 647,850, 0,662, -,-, 603562 Satellite W-chromosome 585 chrUn_NT_464484v1 6684 12783 GGXHOI 409 - 6684 12783 0 8 429,146,335,1446,707,2403,146,337, 0,445,602,981,2467,3189,5605,5762, -,-,-,-,-,-,-,-, 603567 Satellite W-chromosome 585 chrUn_NT_464484v1 12866 21487 GGXHOI 413 - 12866 21487 0 9 2000,146,1023,1370,147,1766,603,1064,334, 0,2013,2170,3214,4605,4767,6594,7208,8287, -,-,-,-,-,-,-,-,-, 603568 Satellite W-chromosome 585 chrUn_NT_464484v1 21571 23644 GGXHOI 419 - 21571 23644 0 5 361,277,905,146,334, 0,372,664,1582,1739, -,-,-,-,-, 603569 Satellite W-chromosome 585 chrUn_NT_464484v1 25247 26637 GGXHOI 404 - 25247 26637 0 2 638,737, 0,653, -,-, 603571 Satellite W-chromosome 585 chrUn_NT_464485v1 6053 7559 GGXHOI 466 - 6053 7559 0 4 447,270,459,215, 0,483,795,1291, -,-,-,-, 603574 Satellite W-chromosome 585 chrUn_NT_464485v1 7624 8411 GGXHOI 561 - 7624 8411 0 2 331,419, 0,368, -,-, 603575 Satellite W-chromosome 585 chrUn_NT_464485v1 12979 17988 GGXHOI 521 - 12979 17988 0 4 555,2163,1674,337, 0,575,2796,4672, -,-,-,-, 603577 Satellite W-chromosome 585 chrUn_NT_464485v1 18054 21161 GGXHOI 545 - 18054 21161 0 2 1854,1242, 0,1865, -,-, 603579 Satellite W-chromosome 585 chrUn_NT_464485v1 22325 23858 GGXHOI 560 - 22325 23858 0 2 489,1025, 0,508, -,-, 603581 Satellite W-chromosome 585 chrUn_NT_464486v1 653 12070 GGXHOI 373 + 653 12070 0 9 371,501,463,3624,762,1139,1430,2293,678, 0,394,917,1401,5040,5824,6979,8425,10739, +,+,+,+,+,+,+,+,+, 603585 Satellite W-chromosome 585 chrUn_NT_464486v1 12139 15884 GGXHOI 385 + 12139 15884 0 3 2204,608,894, 0,2225,2851, +,+,+, 603586 Satellite W-chromosome 585 chrUn_NT_464488v1 157 1999 CR1-F 474 + 157 1999 0 6 190,202,203,199,155,199, 0,486,728,973,1443,1643, +,+,+,+,+,+, 603601 LINE CR1 585 chrUn_NT_464488v1 2039 4793 CR1-F 530 + 2039 4793 0 9 197,181,190,201,202,202,149,196,189, 0,242,460,946,1188,1432,1892,2325,2565, +,+,+,+,+,+,+,+,+, 603604 LINE CR1 585 chrUn_NT_464488v1 5071 7087 CR1-F 555 + 5071 7087 0 8 201,201,177,198,161,93,163,79, 0,243,486,703,941,1324,1614,1937, +,+,+,+,+,+,+,+, 603609 LINE CR1 585 chrUn_NT_464488v1 7132 9975 CR1-F 517 + 7132 9975 0 8 206,201,203,202,204,155,200,209, 0,248,746,991,1235,1705,2149,2634, +,+,+,+,+,+,+,+, 603611 LINE CR1 585 chrUn_NT_464488v1 10018 14236 CR1-F 542 + 10018 14236 0 13 203,203,204,155,200,190,200,203,204,203,154,199,189, 0,245,490,961,1406,1651,1883,2383,2628,2874,3343,3785,4029, +,+,+,+,+,+,+,+,+,+,+,+,+, 603616 LINE CR1 585 chrUn_NT_464488v1 14278 15558 CR1-F 570 + 14278 15558 0 5 175,160,176,154,202, 0,217,659,879,1078, +,+,+,+,+, 603622 LINE CR1 585 chrUn_NT_464488v1 15600 16496 CR1-F 489 + 15600 16496 0 3 197,177,203, 0,471,693, +,+,+, 603624 LINE CR1 585 chrUn_NT_464488v1 16539 21079 CR1-F 524 + 16539 21079 0 14 203,203,203,153,197,186,200,203,204,204,155,211,108,178, 0,245,490,959,1399,1641,1868,2368,2613,2859,3331,3776,4036,4362, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 603626 LINE CR1 585 chrUn_NT_464488v1 21128 21818 CR1-F 590 + 21128 21818 0 2 190,212, 0,478, +,+, 603632 LINE CR1 585 chrUn_NT_464488v1 21861 23223 CR1-F 503 + 21861 23223 0 5 203,202,204,155,203, 0,245,489,959,1159, +,+,+,+,+, 603634 LINE CR1 585 chrUn_NT_464488v1 23265 23687 CR1-F 607 + 23265 23687 0 2 200,177, 0,245, +,+, 603636 LINE CR1 585 chrUn_NT_464488v1 23730 26521 CR1-F 517 + 23730 26521 0 9 203,203,205,155,201,190,201,203,166, 0,239,484,956,1401,1647,1879,2380,2625, +,+,+,+,+,+,+,+,+, 603637 LINE CR1 585 chrUn_NT_464490v1 2264 4141 GGXHOI 359 - 2264 4141 0 3 538,150,1108, 0,597,769, -,-,-, 603665 Satellite W-chromosome 585 chrUn_NT_464490v1 5704 8041 GGXHOI 390 - 5704 8041 0 2 268,2053, 0,284, -,-, 603668 Satellite W-chromosome 585 chrUn_NT_464490v1 8370 14899 GGXHOI 334 - 8370 14899 0 7 259,527,220,206,1755,748,2620, 0,277,850,1115,1340,3116,3909, -,-,-,-,-,-,-, 603669 Satellite W-chromosome 585 chrUn_NT_464490v1 15094 16599 GGXHOI 355 - 15094 16599 0 4 867,346,132,107, 0,883,1243,1398, -,-,-,-, 603670 Satellite W-chromosome 585 chrUn_NT_464490v1 16718 23809 GGXHOI 345 - 16718 23809 0 6 1987,576,125,3486,398,341, 0,2004,2616,2768,6302,6750, -,-,-,-,-,-, 603671 Satellite W-chromosome 585 chrUn_NT_464490v1 23874 26488 GGXHOI 312 - 23874 26488 0 6 450,307,169,671,662,134, 0,498,855,1074,1781,2480, -,-,-,-,-,-, 603672 Satellite W-chromosome 585 chrUn_NT_464491v1 2794 3839 GGXHOI 378 - 2794 3839 0 2 511,471, 0,574, -,-, 603677 Satellite W-chromosome 585 chrUn_NT_464491v1 4593 6137 GGXHOI 379 - 4593 6137 0 2 1009,472, 0,1072, -,-, 603679 Satellite W-chromosome 585 chrUn_NT_464491v1 6236 9003 GGXHOI 387 - 6236 9003 0 3 514,1081,1046, 0,577,1721, -,-,-, 603680 Satellite W-chromosome 585 chrUn_NT_464491v1 10826 11877 GGXHOI 378 - 10826 11877 0 2 516,472, 0,579, -,-, 603683 Satellite W-chromosome 585 chrUn_NT_464491v1 11976 13027 GGXHOI 378 - 11976 13027 0 2 516,472, 0,579, -,-, 603684 Satellite W-chromosome 585 chrUn_NT_464491v1 13126 14577 GGXHOI 370 - 13126 14577 0 2 464,970, 0,481, -,-, 603685 Satellite W-chromosome 585 chrUn_NT_464491v1 22807 23957 GGXHOI 351 - 22807 23957 0 2 822,281, 0,869, -,-, 603693 Satellite W-chromosome 585 chrUn_NT_464492v1 25272 25646 (GCCCCACAGCT)n 661 + 25272 25646 0 2 199,138, 0,236, +,+, 603719 Satellite Satellite 585 chrUn_NT_464493v1 24780 25221 (CAAGG)n 616 + 24780 25221 0 2 174,227, 0,214, +,+, 603727 Simple_repeat Simple_repeat 585 chrUn_NT_464494v1 293 5106 GGXHOI 366 - 293 5106 0 8 181,168,218,1547,980,912,259,326, 0,232,430,682,2240,3275,4210,4487, -,-,-,-,-,-,-,-, 603735 Satellite W-chromosome 585 chrUn_NT_464494v1 5195 11426 GGXHOI 372 - 5195 11426 0 4 2095,2539,262,1274, 0,2115,4677,4957, -,-,-,-, 603736 Satellite W-chromosome 585 chrUn_NT_464494v1 11510 16754 GGXHOI 335 - 11510 16754 0 6 401,422,2309,273,1203,468, 0,446,907,3238,3558,4776, -,-,-,-,-,-, 603737 Satellite W-chromosome 585 chrUn_NT_464494v1 17521 19767 GGXHOI 312 - 17521 19767 0 2 1628,603, 0,1643, -,-, 603739 Satellite W-chromosome 585 chrUn_NT_464494v1 19865 26429 GGXHOI 372 - 19865 26429 0 6 221,1310,2024,820,1874,138, 0,262,1619,3666,4501,6426, -,-,-,-,-,-, 603740 Satellite W-chromosome 585 chrUn_NT_464495v1 6627 6873 Char12Mar1_GG 519 - 6627 6873 0 2 72,174, 0,72, -,-, 603744 DNA hAT-Charlie 585 chrUn_NT_464495v1 22125 22764 GGLTR11-int 398 + 22125 22764 0 2 118,226, 0,413, +,+, 603756 LTR ERV1 585 chrUn_NT_464496v1 1433 4109 GGXHOI 593 - 1433 4109 0 4 407,299,148,459, 0,1082,1392,2217, -,-,-,-, 603762 Satellite W-chromosome 585 chrUn_NT_464496v1 5969 6375 GGXHOI 601 - 5969 6375 0 2 247,148, 0,258, -,-, 603768 Satellite W-chromosome 585 chrUn_NT_464496v1 12765 14305 GGXHOI 604 - 12765 14305 0 4 249,148,299,148, 0,260,1082,1392, -,-,-,-, 603780 Satellite W-chromosome 585 chrUn_NT_464496v1 16163 23785 GGXHOI 573 - 16163 23785 0 10 407,299,148,299,148,299,148,463,635,991, 0,1082,1392,2214,2524,3346,3656,4474,5495,6631, -,-,-,-,-,-,-,-,-,-, 603785 Satellite W-chromosome 585 chrUn_NT_464496v1 23811 26410 GGXHOI 522 - 23811 26410 0 4 765,570,274,260, 0,783,1395,2339, -,-,-,-, 603793 Satellite W-chromosome 585 chrUn_NT_464497v1 1142 4371 GGXHOI 392 - 1142 4371 0 7 509,230,543,629,742,289,156, 0,541,783,1348,2015,2769,3073, -,-,-,-,-,-,-, 603796 Satellite W-chromosome 585 chrUn_NT_464497v1 4470 7751 GGXHOI 393 - 4470 7751 0 5 217,1556,145,628,611, 0,229,1797,2004,2670, -,-,-,-,-, 603797 Satellite W-chromosome 585 chrUn_NT_464497v1 7866 18719 GGXHOI 381 - 7866 18719 0 14 236,473,963,231,784,152,726,131,321,258,1204,2260,835,1986, 0,260,745,1724,1967,2762,2965,3708,3869,4203,4506,5733,8016,8867, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 603799 Satellite W-chromosome 585 chrUn_NT_464497v1 19629 24761 GGXHOI 408 + 19629 24761 0 4 1498,1574,1041,961, 0,1521,3112,4171, +,+,+,+, 603801 Satellite W-chromosome 585 chrUn_NT_464498v1 900 1479 (CGAGG)n 535 + 900 1479 0 3 184,166,176, 0,224,403, +,+,+, 603808 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 1598 1995 (CGAGG)n 529 + 1598 1995 0 2 184,177, 0,220, +,+, 603810 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 6206 6617 (CGAGG)n 492 + 6206 6617 0 2 147,89, 0,322, +,+, 603831 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 8715 9478 (CGAGG)n 541 + 8715 9478 0 2 569,180, 0,583, +,+, 603839 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 11326 11709 (CGAGG)n 547 + 11326 11709 0 2 173,172, 0,211, +,+, 603846 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 11823 12228 (CGAGG)n 504 + 11823 12228 0 2 186,179, 0,226, +,+, 603848 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 14046 14944 (CGAGG)n 479 + 14046 14944 0 2 317,562, 0,336, +,+, 603858 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 17407 17760 (CGGGG)n 428 + 17407 17760 0 2 162,179, 0,174, +,+, 603867 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 18944 20500 (CGAGG)n 456 + 18944 20500 0 2 297,1081, 0,475, +,+, 603874 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 20675 22079 (CGAGG)n 508 + 20675 22079 0 5 431,177,331,178,176, 0,443,659,1006,1228, +,+,+,+,+, 603877 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 22192 22963 (CGAGG)n 474 + 22192 22963 0 2 186,530, 0,241, +,+, 603879 Simple_repeat Simple_repeat 585 chrUn_NT_464498v1 23541 24732 (CGAGG)n 470 + 23541 24732 0 2 328,682, 0,509, +,+, 603881 Simple_repeat Simple_repeat 585 chrUn_NT_464499v1 13127 15541 GGLTR7-int 416 + 13127 15541 0 2 1616,790, 0,1624, +,+, 603908 LTR ERV1 585 chrUn_NT_464499v1 15553 17974 GGERV10_LTR 848 - 15553 17974 0 2 38,41, 0,2380, -,-, 603910 LTR ERVL 585 chrUn_NT_464499v1 15719 17932 GGLTR10D-int 920 - 15719 17932 0 2 363,1847, 0,366, -,-, 603911 LTR ERVK 585 chrUn_NT_464499v1 17974 18880 (CGAGG)n 582 + 17974 18880 0 3 180,508,183, 0,180,723, +,+,+, 603912 Simple_repeat Simple_repeat 585 chrUn_NT_464499v1 19747 20869 (CGAGG)n 532 + 19747 20869 0 3 342,216,514, 0,373,608, +,+,+, 603916 Simple_repeat Simple_repeat 585 chrUn_NT_464499v1 20954 23479 (CGAGG)n 542 + 20954 23479 0 6 184,770,313,649,47,239, 0,237,1026,1372,2199,2286, +,+,+,+,+,+, 603917 Simple_repeat Simple_repeat 585 chrUn_NT_464499v1 23610 24993 (CGAGG)n 520 + 23610 24993 0 3 275,504,254, 0,447,1129, +,+,+, 603920 Simple_repeat Simple_repeat 585 chrUn_NT_464500v1 4377 7527 GGXHOI 380 - 4377 7527 0 3 685,793,1614, 0,699,1536, -,-,-, 603929 Satellite W-chromosome 585 chrUn_NT_464500v1 7609 10743 GGXHOI 360 - 7609 10743 0 4 214,1293,653,917, 0,237,1542,2217, -,-,-,-, 603930 Satellite W-chromosome 585 chrUn_NT_464500v1 10853 12467 GGXHOI 385 - 10853 12467 0 3 145,725,716, 0,156,898, -,-,-, 603931 Satellite W-chromosome 585 chrUn_NT_464500v1 12564 13494 GGXHOI 360 - 12564 13494 0 2 650,226, 0,704, -,-, 603932 Satellite W-chromosome 585 chrUn_NT_464500v1 14943 16196 GGXHOI 387 - 14943 16196 0 2 1038,160, 0,1093, -,-, 603934 Satellite W-chromosome 585 chrUn_NT_464500v1 16279 20799 GGXHOI 397 - 16279 20799 0 2 2624,1885, 0,2635, -,-, 603935 Satellite W-chromosome 585 chrUn_NT_464500v1 20917 22169 GGXHOI 381 - 20917 22169 0 2 501,733, 0,519, -,-, 603936 Satellite W-chromosome 585 chrUn_NT_464500v1 22746 23770 GGXHOI 356 - 22746 23770 0 2 825,187, 0,837, -,-, 603939 Satellite W-chromosome 585 chrUn_NT_464500v1 23993 26376 GGXHOI 374 - 23993 26376 0 2 1916,456, 0,1927, -,-, 603940 Satellite W-chromosome 585 chrUn_NT_464501v1 2085 2617 GGXHOI 277 - 2085 2617 0 2 174,308, 0,224, -,-, 603944 Satellite W-chromosome 585 chrUn_NT_464501v1 3950 5001 GGXHOI 378 - 3950 5001 0 2 516,472, 0,579, -,-, 603947 Satellite W-chromosome 585 chrUn_NT_464501v1 5100 6151 GGXHOI 378 - 5100 6151 0 2 516,472, 0,579, -,-, 603948 Satellite W-chromosome 585 chrUn_NT_464501v1 7538 9908 GGXHOI 387 - 7538 9908 0 2 1222,1085, 0,1285, -,-, 603951 Satellite W-chromosome 585 chrUn_NT_464501v1 15337 17817 GGXHOI 367 - 15337 17817 0 3 1002,880,472, 0,1065,2008, -,-,-, 603960 Satellite W-chromosome 585 chrUn_NT_464501v1 18960 19924 GGXHOI 385 - 18960 19924 0 2 516,385, 0,579, -,-, 603963 Satellite W-chromosome 585 chrUn_NT_464501v1 20108 21176 GGXHOI 380 - 20108 21176 0 2 516,489, 0,579, -,-, 603964 Satellite W-chromosome 585 chrUn_NT_464501v1 25338 26342 GGXHOI 380 - 25338 26342 0 2 516,470, 0,534, -,-, 603971 Satellite W-chromosome 585 chrUn_NT_464502v1 1402 2377 GGXHOI 339 - 1402 2377 0 2 624,329, 0,646, -,-, 603973 Satellite W-chromosome 585 chrUn_NT_464502v1 2648 3243 GGXHOI 447 - 2648 3243 0 2 233,343, 0,252, -,-, 603974 Satellite W-chromosome 585 chrUn_NT_464502v1 3359 5665 GGXHOI 369 - 3359 5665 0 4 217,814,909,314, 0,236,1062,1992, -,-,-,-, 603975 Satellite W-chromosome 585 chrUn_NT_464502v1 8273 16148 GGXHOI 453 - 8273 16148 0 5 1299,1594,1504,1734,1680, 0,1316,2926,4446,6195, -,-,-,-,-, 603977 Satellite W-chromosome 585 chrUn_NT_464502v1 16246 25528 GGXHOI 381 - 16246 25528 0 11 359,924,1175,855,2027,1529,1374,139,297,147,241, 0,380,1320,2518,3388,5474,7022,8412,8569,8878,9041, -,-,-,-,-,-,-,-,-,-,-, 603978 Satellite W-chromosome 585 chrUn_NT_464505v1 1124 2502 GGLTR7-int 306 + 1124 2502 0 3 89,233,277, 0,91,1101, +,+,+, 604061 LTR ERV1 585 chrUn_NT_464505v1 16735 17458 (GCCTG)n 530 + 16735 17458 0 2 339,96, 0,627, +,+, 604085 Simple_repeat Simple_repeat 585 chrUn_NT_464505v1 19516 21845 GGERVL-B-int 695 + 19516 21845 0 2 1828,501, 0,1828, +,+, 604091 LTR ERVL 585 chrUn_NT_464505v1 22507 23908 GGLTR7-int 313 + 22507 23908 0 3 101,315,283, 0,103,1118, +,+,+, 604093 LTR ERV1 585 chrUn_NT_464506v1 15038 15876 Z-REP 509 + 15038 15876 0 2 440,314, 0,524, +,+, 604107 Satellite macro 585 chrUn_NT_464506v1 20697 22567 GGLTR7-int 588 - 20697 22567 0 3 74,645,526, 0,699,1344, -,-,-, 604111 LTR ERV1 585 chrUn_NT_464507v1 2335 3926 GGXHOI 363 - 2335 3926 0 4 148,952,139,254, 0,207,1172,1337, -,-,-,-, 604114 Satellite W-chromosome 585 chrUn_NT_464507v1 4507 6244 GGXHOI 369 - 4507 6244 0 5 128,634,64,636,190, 0,146,800,878,1547, -,-,-,-,-, 604116 Satellite W-chromosome 585 chrUn_NT_464507v1 6621 7108 GGXHOI 321 - 6621 7108 0 2 301,171, 0,316, -,-, 604117 Satellite W-chromosome 585 chrUn_NT_464507v1 7184 9733 GGXHOI 377 - 7184 9733 0 3 715,1429,334, 0,771,2215, -,-,-, 604118 Satellite W-chromosome 585 chrUn_NT_464507v1 9967 14301 GGXHOI 388 - 9967 14301 0 5 364,1462,1047,512,879, 0,384,1869,2928,3455, -,-,-,-,-, 604119 Satellite W-chromosome 585 chrUn_NT_464507v1 14571 14974 GGXHOI 386 - 14571 14974 0 2 103,285, 0,118, -,-, 604120 Satellite W-chromosome 585 chrUn_NT_464507v1 15062 18005 GGXHOI 413 - 15062 18005 0 5 555,551,1381,64,330, 0,567,1133,2534,2613, -,-,-,-,-, 604121 Satellite W-chromosome 585 chrUn_NT_464507v1 18994 19875 GGXHOI 336 - 18994 19875 0 2 478,365, 0,516, -,-, 604124 Satellite W-chromosome 585 chrUn_NT_464507v1 20369 26212 GGXHOI 414 - 20369 26212 0 8 146,958,429,64,1363,106,1450,1203, 0,161,1144,1593,1672,3055,3176,4640, -,-,-,-,-,-,-,-, 604126 Satellite W-chromosome 585 chrUn_NT_464508v1 4529 8567 GGXHOI 345 - 4529 8567 0 4 887,1490,273,1295, 0,907,2412,2743, -,-,-,-, 604128 Satellite W-chromosome 585 chrUn_NT_464508v1 8645 10334 GGXHOI 351 - 8645 10334 0 3 676,554,384, 0,738,1305, -,-,-, 604129 Satellite W-chromosome 585 chrUn_NT_464508v1 10398 13909 GGXHOI 348 - 10398 13909 0 3 793,1905,757, 0,814,2754, -,-,-, 604130 Satellite W-chromosome 585 chrUn_NT_464508v1 14029 22793 GGXHOI 354 - 14029 22793 0 5 1026,998,1916,1312,3431, 0,1047,2062,3999,5333, -,-,-,-,-, 604131 Satellite W-chromosome 585 chrUn_NT_464508v1 23004 23684 GGXHOI 389 - 23004 23684 0 2 602,66, 0,614, -,-, 604132 Satellite W-chromosome 585 chrUn_NT_464509v1 21298 26190 GGXHOI 440 - 21298 26190 0 2 4720,109, 0,4783, -,-, 604137 Satellite W-chromosome 585 chrUn_NT_464510v1 695 3511 GGERVL-B-int 710 - 695 3511 0 2 912,1904, 0,912, -,-, 604140 LTR ERVL 585 chrUn_NT_464510v1 6122 6564 (CAAGG)n 625 + 6122 6564 0 2 58,384, 0,58, +,+, 604146 Simple_repeat Simple_repeat 585 chrUn_NT_464510v1 8203 8767 (CAAGG)n 616 + 8203 8767 0 2 361,203, 0,361, +,+, 604155 Simple_repeat Simple_repeat 585 chrUn_NT_464510v1 17666 19055 GGLTR7-int 306 - 17666 19055 0 3 279,259,99, 0,1029,1290, -,-,-, 604169 LTR ERV1 585 chrUn_NT_464510v1 19792 22635 GGERVL-B-int 712 - 19792 22635 0 2 915,1928, 0,915, -,-, 604171 LTR ERVL 585 chrUn_NT_464510v1 24932 25748 GGLTR7A 608 - 24932 25748 0 2 276,460, 0,356, -,-, 604175 LTR ERV1 585 chrUn_NT_464511v1 511 1094 (CTCTATGGGG)n 515 - 511 1094 0 4 119,100,25,42, 0,141,351,541, -,-,-,-, 604180 Satellite Satellite 585 chrUn_NT_464511v1 1177 1626 (CTCTATGGGG)n 455 - 1177 1626 0 3 137,117,162, 0,158,287, -,-,-, 604183 Satellite Satellite 585 chrUn_NT_464511v1 1804 2235 (CTCTATGGGG)n 470 - 1804 2235 0 3 140,122,115, 0,152,316, -,-,-, 604185 Satellite Satellite 585 chrUn_NT_464511v1 5056 5344 (ACCCCATAGGG)n 395 - 5056 5344 0 2 124,142, 0,146, -,-, 604189 Satellite Satellite 585 chrUn_NT_464511v1 12614 13173 (ACCCCATAGGG)n 476 - 12614 13173 0 3 243,158,158, 0,243,401, -,-,-, 604203 Satellite Satellite 585 chrUn_NT_464511v1 13254 13625 (ACCCCATAGGG)n 514 - 13254 13625 0 2 156,91, 0,280, -,-, 604205 Satellite Satellite 585 chrUn_NT_464511v1 13525 13802 (ACCCATAGAG)n 510 + 13525 13802 0 2 113,41, 0,236, +,+, 604207 Satellite Satellite 585 chrUn_NT_464512v1 4616 10442 GGERV10_LTR 983 - 4616 10442 0 3 220,5385,220, 0,220,5606, -,-,-, 604225 LTR ERVL 585 chrUn_NT_464514v1 7642 21201 GGXHOI 439 + 7642 21201 0 8 563,1879,283,808,3751,3536,1555,990, 0,582,2480,2792,3629,7430,10985,12569, +,+,+,+,+,+,+,+, 604239 Satellite W-chromosome 585 chrUn_NT_464514v1 21346 26043 GGXHOI 418 + 21346 26043 0 3 559,3932,169, 0,578,4528, +,+,+, 604240 Satellite W-chromosome 585 chrUn_NT_464515v1 8777 9303 GGLTR3F1 755 + 8777 9303 0 3 230,118,74, 0,286,452, +,+,+, 604249 LTR ERVL 585 chrUn_NT_464515v1 19167 19812 GGERVK10-int 364 + 19167 19812 0 3 105,141,62, 0,278,583, +,+,+, 604260 LTR ERVK 585 chrUn_NT_464517v1 5560 6958 GGLTR7-int 294 - 5560 6958 0 3 276,258,104, 0,1033,1294, -,-,-, 604277 LTR ERV1 585 chrUn_NT_464517v1 7694 10368 GGERVL-B-int 684 - 7694 10368 0 2 2373,301, 0,2373, -,-, 604280 LTR ERVL 585 chrUn_NT_464517v1 12655 13507 GGLTR7A 710 - 12655 13507 0 2 571,280, 0,572, -,-, 604284 LTR ERV1 585 chrUn_NT_464517v1 14741 15141 (CAGGC)n 500 + 14741 15141 0 2 147,105, 0,295, +,+, 604291 Simple_repeat Simple_repeat 585 chrUn_NT_464517v1 15047 15420 (CAAGG)n 577 + 15047 15420 0 2 179,194, 0,179, +,+, 604293 Simple_repeat Simple_repeat 585 chrUn_NT_464517v1 15532 16098 (CAAGG)n 576 + 15532 16098 0 2 309,80, 0,486, +,+, 604295 Simple_repeat Simple_repeat 585 chrUn_NT_464518v1 5407 7498 GGXHOI 333 - 5407 7498 0 4 145,538,398,912, 0,179,736,1179, -,-,-,-, 604309 Satellite W-chromosome 585 chrUn_NT_464518v1 7584 9513 GGXHOI 371 - 7584 9513 0 3 930,451,472, 0,960,1457, -,-,-, 604310 Satellite W-chromosome 585 chrUn_NT_464518v1 9669 12312 GGXHOI 397 - 9669 12312 0 4 645,555,477,851, 0,668,1273,1792, -,-,-,-, 604311 Satellite W-chromosome 585 chrUn_NT_464518v1 13858 14616 GGXHOI 388 - 13858 14616 0 2 389,325, 0,433, -,-, 604313 Satellite W-chromosome 585 chrUn_NT_464518v1 14826 17566 GGXHOI 399 - 14826 17566 0 3 834,1469,405, 0,851,2335, -,-,-, 604314 Satellite W-chromosome 585 chrUn_NT_464518v1 17696 21192 GGXHOI 378 - 17696 21192 0 5 464,374,441,454,1683, 0,484,881,1339,1813, -,-,-,-,-, 604315 Satellite W-chromosome 585 chrUn_NT_464518v1 22653 25105 GGXHOI 409 - 22653 25105 0 4 388,447,439,1121, 0,405,872,1331, -,-,-,-, 604318 Satellite W-chromosome 585 chrUn_NT_464518v1 25210 25968 GGXHOI 318 - 25210 25968 0 2 168,575, 0,183, -,-, 604319 Satellite W-chromosome 585 chrUn_NT_464519v1 1905 5406 GGXHOI 390 - 1905 5406 0 3 955,467,2046, 0,973,1455, -,-,-, 604322 Satellite W-chromosome 585 chrUn_NT_464519v1 5532 6110 GGXHOI 350 - 5532 6110 0 2 188,330, 0,248, -,-, 604323 Satellite W-chromosome 585 chrUn_NT_464519v1 6526 11147 GGXHOI 367 - 6526 11147 0 6 1030,391,437,1199,1056,363, 0,1048,1463,1962,3183,4258, -,-,-,-,-,-, 604325 Satellite W-chromosome 585 chrUn_NT_464519v1 11243 16028 GGXHOI 376 - 11243 16028 0 6 556,787,510,1618,868,335, 0,571,1383,1911,3570,4450, -,-,-,-,-,-, 604326 Satellite W-chromosome 585 chrUn_NT_464519v1 16117 17704 GGXHOI 381 - 16117 17704 0 2 1437,133, 0,1454, -,-, 604327 Satellite W-chromosome 585 chrUn_NT_464519v1 18210 19654 GGXHOI 395 - 18210 19654 0 3 439,292,679, 0,457,765, -,-,-, 604328 Satellite W-chromosome 585 chrUn_NT_464519v1 19755 22677 GGXHOI 411 - 19755 22677 0 3 1052,914,880, 0,1105,2042, -,-,-, 604329 Satellite W-chromosome 585 chrUn_NT_464519v1 23535 24857 GGXHOI 366 - 23535 24857 0 2 107,1166, 0,156, -,-, 604331 Satellite W-chromosome 585 chrUn_NT_464519v1 24936 25880 GGXHOI 366 - 24936 25880 0 2 535,390, 0,554, -,-, 604332 Satellite W-chromosome 585 chrUn_NT_464521v1 19184 24188 CR1-F 873 + 19184 24188 0 2 329,4144, 0,860, +,+, 604348 LINE CR1 585 chrUn_NT_464522v1 5325 8126 GGXHOI 417 - 5325 8126 0 4 403,1055,1121,162, 0,423,1498,2639, -,-,-,-, 604355 Satellite W-chromosome 585 chrUn_NT_464522v1 8332 19298 GGXHOI 411 - 8332 19298 0 12 749,1157,328,602,965,1061,146,1074,1140,1139,1143,1226, 0,769,1941,2327,2944,3929,5003,5164,6258,7418,8577,9740, -,-,-,-,-,-,-,-,-,-,-,-, 604356 Satellite W-chromosome 585 chrUn_NT_464522v1 19461 25887 GGXHOI 407 - 19461 25887 0 7 726,1225,799,146,2063,1187,147, 0,746,1986,2798,2955,5070,6279, -,-,-,-,-,-,-, 604357 Satellite W-chromosome 585 chrUn_NT_464523v1 2236 4458 GGXHOI 335 + 2236 4458 0 3 975,276,890, 0,1000,1332, +,+,+, 604359 Satellite W-chromosome 585 chrUn_NT_464523v1 4759 22926 GGXHOI 400 + 4759 22926 0 18 1235,265,1196,704,2382,164,1312,185,1147,1724,147,1152,2294,1331,1161,706,484,218, 0,1253,1541,2756,3483,5884,6105,7439,7642,8810,10552,10717,11887,14197,15544,16726,17453,17949, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 604360 Satellite W-chromosome 585 chrUn_NT_464523v1 23173 25811 GGXHOI 368 + 23173 25811 0 6 606,145,149,1077,216,279, 0,624,787,994,2128,2359, +,+,+,+,+,+, 604361 Satellite W-chromosome 585 chrUn_NT_464524v1 10910 11795 CR1-Y2_Aves 256 + 10910 11795 0 2 636,242, 0,643, +,+, 604368 LINE CR1 585 chrUn_NT_464524v1 24081 25874 CR1-F 827 - 24081 25874 0 2 1206,587, 0,1206, -,-, 604379 LINE CR1 585 chrUn_NT_464525v1 14529 16904 GGLTR7-int 518 + 14529 16904 0 2 1578,789, 0,1586, +,+, 604392 LTR ERV1 585 chrUn_NT_464525v1 17083 19285 GGLTR10D-int 901 - 17083 19285 0 2 361,1834, 0,368, -,-, 604393 LTR ERVK 585 chrUn_NT_464525v1 19327 20817 (CGAGG)n 536 + 19327 20817 0 5 184,323,259,318,177, 0,200,537,975,1313, +,+,+,+,+, 604395 Simple_repeat Simple_repeat 585 chrUn_NT_464525v1 21007 22371 (CGAGG)n 503 + 21007 22371 0 2 793,556, 0,808, +,+, 604397 Simple_repeat Simple_repeat 585 chrUn_NT_464525v1 22549 23534 (CGAGG)n 529 + 22549 23534 0 3 75,30,681, 0,246,304, +,+,+, 604399 Simple_repeat Simple_repeat 585 chrUn_NT_464526v1 570 959 (CAAGG)n 452 + 570 959 0 2 188,184, 0,205, +,+, 604413 Simple_repeat Simple_repeat 585 chrUn_NT_464526v1 1039 1924 (CCTTG)n 516 + 1039 1924 0 4 227,178,266,180, 0,251,439,705, +,+,+,+, 604414 Simple_repeat Simple_repeat 585 chrUn_NT_464526v1 2464 3452 (CAAGG)n 497 + 2464 3452 0 3 371,214,376, 0,371,612, +,+,+, 604417 Simple_repeat Simple_repeat 585 chrUn_NT_464526v1 3659 4349 (CCTTG)n 526 + 3659 4349 0 2 176,481, 0,209, +,+, 604420 Simple_repeat Simple_repeat 585 chrUn_NT_464526v1 5229 13446 GGXHOI 368 - 5229 13446 0 9 1138,551,428,2560,840,535,515,631,764, 0,1156,1724,2170,4748,5645,6224,6765,7453, -,-,-,-,-,-,-,-,-, 604425 Satellite W-chromosome 585 chrUn_NT_464526v1 13544 25674 GGXHOI 381 - 13544 25674 0 3 3629,2888,5577, 0,3647,6553, -,-,-, 604426 Satellite W-chromosome 585 chrUn_NT_464527v1 4221 6637 GGXHOI 370 - 4221 6637 0 2 1978,420, 0,1996, -,-, 604435 Satellite W-chromosome 585 chrUn_NT_464527v1 7436 8490 GGXHOI 390 - 7436 8490 0 2 314,714, 0,340, -,-, 604439 Satellite W-chromosome 585 chrUn_NT_464527v1 8607 9400 GGXHOI 332 - 8607 9400 0 2 698,78, 0,715, -,-, 604441 Satellite W-chromosome 585 chrUn_NT_464527v1 9426 12363 GGXHOI 384 - 9426 12363 0 2 2518,397, 0,2540, -,-, 604443 Satellite W-chromosome 585 chrUn_NT_464527v1 14407 15884 GGXHOI 427 - 14407 15884 0 2 1330,86, 0,1391, -,-, 604448 Satellite W-chromosome 585 chrUn_NT_464527v1 17461 19429 GGXHOI 400 + 17461 19429 0 3 493,743,692, 0,514,1276, +,+,+, 604453 Satellite W-chromosome 585 chrUn_NT_464527v1 19463 21429 GGXHOI 396 + 19463 21429 0 2 1255,692, 0,1274, +,+, 604455 Satellite W-chromosome 585 chrUn_NT_464527v1 21463 23422 GGXHOI 395 + 21463 23422 0 3 821,417,686, 0,837,1273, +,+,+, 604457 Satellite W-chromosome 585 chrUn_NT_464528v1 751 2581 CR1-F 492 + 751 2581 0 6 201,202,204,150,204,209, 0,243,487,940,1369,1621, +,+,+,+,+,+, 604464 LINE CR1 585 chrUn_NT_464528v1 2624 4499 CR1-F 496 + 2624 4499 0 6 204,206,204,153,204,212, 0,249,498,971,1415,1663, +,+,+,+,+,+, 604467 LINE CR1 585 chrUn_NT_464528v1 4542 6409 CR1-F 492 + 4542 6409 0 6 203,206,202,152,202,210, 0,245,494,965,1408,1657, +,+,+,+,+,+, 604470 LINE CR1 585 chrUn_NT_464528v1 6452 8308 CR1-F 500 + 6452 8308 0 6 205,207,203,152,198,211, 0,247,496,964,1404,1645, +,+,+,+,+,+, 604473 LINE CR1 585 chrUn_NT_464528v1 8351 9956 CR1-F 508 + 8351 9956 0 5 202,203,204,153,200, 0,246,492,962,1405, +,+,+,+,+, 604476 LINE CR1 585 chrUn_NT_464528v1 10262 11624 CR1-F 498 + 10262 11624 0 5 203,204,203,154,204, 0,245,491,959,1158, +,+,+,+,+, 604480 LINE CR1 585 chrUn_NT_464528v1 11665 12119 CR1-F 518 + 11665 12119 0 2 197,213, 0,241, +,+, 604482 LINE CR1 585 chrUn_NT_464528v1 12168 14030 CR1-F 499 + 12168 14030 0 6 199,208,204,153,198,214, 0,241,491,962,1404,1648, +,+,+,+,+,+, 604483 LINE CR1 585 chrUn_NT_464528v1 14073 15947 CR1-F 504 + 14073 15947 0 6 204,205,208,155,191,212, 0,245,492,970,1415,1662, +,+,+,+,+,+, 604486 LINE CR1 585 chrUn_NT_464528v1 15991 17211 CR1-F 535 + 15991 17211 0 4 198,197,69,46, 0,461,915,1174, +,+,+,+, 604489 LINE CR1 585 chrUn_NT_464528v1 17284 25726 CR1-F 506 + 17284 25726 0 25 173,161,201,203,204,204,150,175,200,203,199,204,155,196,189,201,202,204,204,154,200,188,198,203,201, 0,208,403,903,1148,1394,1864,2300,2753,3252,3497,3738,4208,4652,4892,5119,5620,5864,6110,6580,7023,7268,7498,7996,8241, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 604492 LINE CR1 585 chrUn_NT_464529v1 1096 2854 (CCTCG)n 526 + 1096 2854 0 4 438,187,177,862, 0,462,679,896, +,+,+,+, 604511 Simple_repeat Simple_repeat 585 chrUn_NT_464529v1 3296 5402 GGLTR10D-int 707 + 3296 5402 0 3 96,1609,358, 0,136,1748, +,+,+, 604517 LTR ERVK 585 chrUn_NT_464529v1 5577 8014 GGLTR7-int 580 - 5577 8014 0 2 778,338, 0,2099, -,-, 604520 LTR ERV1 585 chrUn_NT_464529v1 11837 12090 G-rich 375 + 11837 12090 0 2 38,168, 0,85, +,+, 604525 Low_complexity Low_complexity 585 chrUn_NT_464530v1 2076 4868 GGXHOI 549 - 2076 4868 0 4 565,366,60,957, 0,1126,1523,1835, -,-,-,-, 604537 Satellite W-chromosome 585 chrUn_NT_464530v1 4956 6158 GGXHOI 475 - 4956 6158 0 2 336,822, 0,380, -,-, 604541 Satellite W-chromosome 585 chrUn_NT_464530v1 6339 8442 GGXHOI 582 - 6339 8442 0 2 310,1052, 0,1051, -,-, 604542 Satellite W-chromosome 585 chrUn_NT_464530v1 8486 10412 GGXHOI 530 - 8486 10412 0 3 201,510,55, 0,1130,1871, -,-,-, 604545 Satellite W-chromosome 585 chrUn_NT_464530v1 10580 20023 GGXHOI 474 - 10580 20023 0 12 142,255,1030,125,408,686,1703,212,144,143,916,14, 0,182,1044,2758,2924,3896,5119,7475,7723,7900,8074,9429, -,-,-,-,-,-,-,-,-,-,-,-, 604548 Satellite W-chromosome 585 chrUn_NT_464530v1 20142 21563 GGXHOI 583 - 20142 21563 0 3 207,148,500, 0,218,921, -,-,-, 604555 Satellite W-chromosome 585 chrUn_NT_464530v1 21641 24939 GGXHOI 540 - 21641 24939 0 6 18,499,28,558,369,471, 0,395,930,1451,2434,2827, -,-,-,-,-,-, 604557 Satellite W-chromosome 585 chrUn_NT_464531v1 505 1060 (CGAGG)n 503 + 505 1060 0 2 187,354, 0,201, +,+, 604564 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 1317 2601 (CGAGG)n 511 + 1317 2601 0 3 577,181,485, 0,588,799, +,+,+, 604567 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 2642 3593 (CGAGG)n 541 + 2642 3593 0 3 505,177,179, 0,554,772, +,+,+, 604569 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 3983 4653 (CGAGG)n 547 + 3983 4653 0 3 243,135,100, 0,423,570, +,+,+, 604571 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 4940 6498 (CCTCG)n 558 + 4940 6498 0 5 217,176,335,515,180, 0,248,466,831,1378, +,+,+,+,+, 604574 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 7731 8513 (CCTCG)n 572 + 7731 8513 0 4 181,199,122,65, 0,205,404,717, +,+,+,+, 604582 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 8558 9409 (CCTCG)n 549 + 8558 9409 0 3 240,79,324, 0,428,527, +,+,+, 604585 Simple_repeat Simple_repeat 585 chrUn_NT_464531v1 9448 11505 GGLTR10D-int 917 + 9448 11505 0 3 53,1606,365, 0,83,1692, +,+,+, 604589 LTR ERVK 585 chrUn_NT_464531v1 11682 14076 GGLTR7-int 551 - 11682 14076 0 2 769,339, 0,2055, -,-, 604590 LTR ERV1 585 chrUn_NT_464531v1 18326 18958 G-rich 470 + 18326 18958 0 2 38,544, 0,88, +,+, 604597 Low_complexity Low_complexity 585 chrUn_NT_464532v1 1717 5935 GGXHOI 380 - 1717 5935 0 5 277,1621,904,857,439, 0,298,1939,2859,3779, -,-,-,-,-, 604606 Satellite W-chromosome 585 chrUn_NT_464532v1 6651 9496 GGXHOI 331 - 6651 9496 0 3 393,1764,607, 0,453,2238, -,-,-, 604609 Satellite W-chromosome 585 chrUn_NT_464532v1 14876 18300 GGXHOI 379 - 14876 18300 0 3 753,1689,931, 0,770,2493, -,-,-, 604621 Satellite W-chromosome 585 chrUn_NT_464532v1 18499 23215 GGXHOI 377 - 18499 23215 0 3 515,3540,561, 0,571,4155, -,-,-, 604624 Satellite W-chromosome 585 chrUn_NT_464532v1 23404 23742 GGXHOI 408 - 23404 23742 0 2 136,145, 0,193, -,-, 604625 Satellite W-chromosome 585 chrUn_NT_464532v1 24071 25683 GGXHOI 394 - 24071 25683 0 2 1277,319, 0,1293, -,-, 604626 Satellite W-chromosome 585 chrUn_NT_464533v1 8841 9333 GGLTR3F2 592 + 8841 9333 0 2 223,220, 0,272, +,+, 604633 LTR ERVL 585 chrUn_NT_464534v1 7977 8639 (CCTTG)n 566 + 7977 8639 0 2 407,81, 0,581, +,+, 604660 Simple_repeat Simple_repeat 585 chrUn_NT_464534v1 8609 9754 (GCCTG)n 507 + 8609 9754 0 5 179,127,52,31,180, 0,179,679,909,965, +,+,+,+,+, 604662 Simple_repeat Simple_repeat 585 chrUn_NT_464534v1 10929 11418 (GCCTG)n 531 + 10929 11418 0 2 290,174, 0,315, +,+, 604673 Simple_repeat Simple_repeat 585 chrUn_NT_464534v1 13475 16211 GGERVL-B-int 712 + 13475 16211 0 2 1824,912, 0,1824, +,+, 604676 LTR ERVL 585 chrUn_NT_464535v1 7040 7938 G-rich 334 + 7040 7938 0 2 417,427, 0,471, +,+, 604694 Low_complexity Low_complexity 585 chrUn_NT_464535v1 10287 12659 GGLTR7-int 410 + 10287 12659 0 2 269,795, 0,1577, +,+, 604698 LTR ERV1 585 chrUn_NT_464535v1 12671 15095 GGERV10_LTR 848 - 12671 15095 0 2 38,41, 0,2383, -,-, 604701 LTR ERVL 585 chrUn_NT_464535v1 12838 15053 GGLTR10D-int 922 - 12838 15053 0 2 364,1848, 0,367, -,-, 604702 LTR ERVK 585 chrUn_NT_464535v1 15092 16592 (CGAGG)n 564 + 15092 16592 0 4 254,273,184,569, 0,432,731,931, +,+,+,+, 604703 Simple_repeat Simple_repeat 585 chrUn_NT_464535v1 16775 17416 (CGAGG)n 510 + 16775 17416 0 2 438,25, 0,616, +,+, 604706 Simple_repeat Simple_repeat 585 chrUn_NT_464535v1 17919 19178 (CGAGG)n 526 + 17919 19178 0 5 179,133,20,111,301, 0,192,633,668,958, +,+,+,+,+, 604711 Simple_repeat Simple_repeat 585 chrUn_NT_464535v1 19751 20646 (CGAGG)n 509 + 19751 20646 0 3 353,35,189, 0,656,706, +,+,+, 604717 Simple_repeat Simple_repeat 585 chrUn_NT_464535v1 21566 22296 (CGAGG)n 535 + 21566 22296 0 2 179,551, 0,179, +,+, 604723 Simple_repeat Simple_repeat 585 chrUn_NT_464535v1 22632 23005 (CGAGG)n 559 + 22632 23005 0 2 178,176, 0,197, +,+, 604724 Simple_repeat Simple_repeat 585 chrUn_NT_464535v1 23080 23911 (CGAGG)n 567 + 23080 23911 0 4 180,179,176,185, 0,200,433,646, +,+,+,+, 604726 Simple_repeat Simple_repeat 585 chrUn_NT_464536v1 12098 13010 GGERVL-A-int 165 + 12098 13010 0 2 393,242, 0,670, +,+, 604751 LTR ERVL 585 chrUn_NT_464536v1 18570 19729 CR1-D2 654 - 18570 19729 0 2 430,396, 0,763, -,-, 604757 LINE CR1 585 chrUn_NT_464538v1 208 1750 (CAAGG)n 539 + 208 1750 0 7 120,54,177,182,316,172,185, 0,303,385,613,844,1185,1357, +,+,+,+,+,+,+, 604777 Simple_repeat Simple_repeat 585 chrUn_NT_464538v1 20688 25523 GGXHOI 436 - 20688 25523 0 4 1312,235,1388,1845, 0,1333,1579,2990, -,-,-,-, 604780 Satellite W-chromosome 585 chrUn_NT_464540v1 528 3290 GGXHOI 378 - 528 3290 0 2 1275,1466, 0,1296, -,-, 604784 Satellite W-chromosome 585 chrUn_NT_464540v1 3473 13151 GGXHOI 374 - 3473 13151 0 5 616,616,5291,1782,1173, 0,658,1316,6665,8505, -,-,-,-,-, 604785 Satellite W-chromosome 585 chrUn_NT_464540v1 13357 19775 GGXHOI 373 - 13357 19775 0 2 4948,1412, 0,5006, -,-, 604786 Satellite W-chromosome 585 chrUn_NT_464541v1 3335 8584 GGXHOI 522 - 3335 8584 0 5 902,370,470,521,2483, 0,1312,1696,2226,2766, -,-,-,-,-, 604796 Satellite W-chromosome 585 chrUn_NT_464541v1 9177 23945 GGXHOI 568 - 9177 23945 0 20 600,28,436,28,626,153,58,361,28,58,492,66,249,978,477,250,644,1709,656,794, 0,1197,1669,2703,3112,4204,4678,4750,5700,6168,6240,7034,7312,7575,8997,9646,10255,11262,13294,13974, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 604799 Satellite W-chromosome 585 chrUn_NT_464541v1 23987 24653 GGXHOI 582 - 23987 24653 0 2 162,461, 0,205, -,-, 604816 Satellite W-chromosome 585 chrUn_NT_464542v1 3652 14714 GGERVL-B-int 751 - 3652 14714 0 6 197,77,547,359,725,456, 0,4480,4557,9520,9879,10606, -,-,-,-,-,-, 604823 LTR ERVL 585 chrUn_NT_464542v1 14714 16502 GGLTR3B1 816 - 14714 16502 0 3 1524,231,33, 0,1524,1755, -,-,-, 604826 LTR ERVL 585 chrUn_NT_464542v1 18139 18904 GGLTR3F2 744 + 18139 18904 0 3 232,229,264, 0,270,501, +,+,+, 604828 LTR ERVL 585 chrUn_NT_464542v1 19093 25326 GGERVL-C-int 613 + 19093 25326 0 4 198,393,83,585, 0,2275,5565,5648, +,+,+,+, 604830 LTR ERVL 585 chrUn_NT_464542v1 23635 24657 GGERVL-B-int 791 + 23635 24657 0 2 571,448, 0,574, +,+, 604836 LTR ERVL 585 chrUn_NT_464543v1 3038 3661 CR1-H 681 + 3038 3661 0 2 478,139, 0,484, +,+, 604841 LINE CR1 585 chrUn_NT_464543v1 13888 14344 CR1-H 672 + 13888 14344 0 2 295,161, 0,295, +,+, 604850 LINE CR1 585 chrUn_NT_464543v1 16522 17157 CR1-H 612 + 16522 17157 0 2 486,143, 0,492, +,+, 604854 LINE CR1 585 chrUn_NT_464544v1 36 889 (CGAGG)n 527 + 36 889 0 2 543,296, 0,557, +,+, 604864 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 976 1368 (CGAGG)n 556 + 976 1368 0 2 178,178, 0,214, +,+, 604865 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 1518 2420 (CGAGG)n 533 + 1518 2420 0 2 176,696, 0,206, +,+, 604867 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 2520 4071 (CGAGG)n 542 + 2520 4071 0 4 338,723,355,76, 0,352,1109,1475, +,+,+,+, 604869 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 4524 5789 (CGAGG)n 532 + 4524 5789 0 2 1053,35, 0,1230, +,+, 604875 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 5853 6936 (CGAGG)n 572 + 5853 6936 0 2 484,424, 0,659, +,+, 604877 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 7513 8477 (CGAGG)n 567 + 7513 8477 0 4 363,178,180,178, 0,381,588,786, +,+,+,+, 604882 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 11031 11971 (CGAGG)n 504 + 11031 11971 0 2 530,234, 0,706, +,+, 604889 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 12469 13897 (CGAGG)n 494 + 12469 13897 0 2 464,785, 0,643, +,+, 604893 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 14381 15331 (CGAGG)n 492 + 14381 15331 0 2 111,823, 0,127, +,+, 604895 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 18507 19407 (CGAGG)n 580 + 18507 19407 0 2 671,215, 0,685, +,+, 604913 Simple_repeat Simple_repeat 585 chrUn_NT_464544v1 20690 24459 (CGAGG)n 547 + 20690 24459 0 7 747,265,35,482,1101,305,178, 0,796,1238,1336,1988,3268,3591, +,+,+,+,+,+,+, 604921 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 145 966 (CGAGG)n 475 + 145 966 0 3 378,212,190, 0,378,631, +,+,+, 604929 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 1133 4323 (CGAGG)n 587 + 1133 4323 0 9 307,213,79,104,21,188,526,64,570, 0,487,700,911,1570,1628,1829,2536,2620, +,+,+,+,+,+,+,+,+, 604931 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 2148 2703 (CAAGG)n 438 + 2148 2703 0 2 170,204, 0,351, +,+, 604934 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 4382 4783 (CGAGG)n 484 + 4382 4783 0 2 193,186, 0,215, +,+, 604940 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 5206 5622 (CGAGG)n 544 + 5206 5622 0 2 191,183, 0,233, +,+, 604944 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 5546 5885 (CAAGG)n 432 + 5546 5885 0 2 116,41, 0,298, +,+, 604945 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 6374 7469 (CGAGG)n 583 + 6374 7469 0 3 468,381,224, 0,490,871, +,+,+, 604949 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 8620 9552 (CGAGG)n 554 + 8620 9552 0 3 522,179,185, 0,568,747, +,+,+, 604957 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 10381 10949 (CGAGG)n 551 + 10381 10949 0 2 373,195, 0,373, +,+, 604963 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 11259 12029 (CGAGG)n 579 + 11259 12029 0 3 182,182,363, 0,214,407, +,+,+, 604966 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 12108 14240 (CGAGG)n 553 + 12108 14240 0 7 224,210,331,117,60,364,370, 0,242,477,985,1285,1387,1762, +,+,+,+,+,+,+, 604969 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 14295 15101 (CGAGG)n 570 + 14295 15101 0 2 403,211, 0,595, +,+, 604974 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 15195 15930 (CGAGG)n 545 + 15195 15930 0 2 188,523, 0,212, +,+, 604977 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 16067 17579 (CGAGG)n 551 + 16067 17579 0 6 231,183,216,216,117,28, 0,283,499,715,972,1484, +,+,+,+,+,+, 604979 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 17660 18074 (CGAGG)n 607 + 17660 18074 0 2 220,181, 0,233, +,+, 604983 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 18895 20193 (CGAGG)n 542 + 18895 20193 0 4 182,344,230,442, 0,217,574,856, +,+,+,+, 604989 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 20236 20656 (CGAGG)n 452 + 20236 20656 0 2 138,100, 0,320, +,+, 604991 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 20818 22271 (CGAGG)n 535 + 20818 22271 0 4 384,184,233,70, 0,401,603,1383, +,+,+,+, 604994 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 23728 24164 (CGAGG)n 480 + 23728 24164 0 2 190,93, 0,343, +,+, 605004 Simple_repeat Simple_repeat 585 chrUn_NT_464545v1 24488 25042 (CGAGG)n 555 + 24488 25042 0 2 358,181, 0,373, +,+, 605011 Simple_repeat Simple_repeat 585 chrUn_NT_464546v1 4599 25418 GGXHOI 423 - 4599 25418 0 7 4596,3065,1059,6388,825,4255,420, 0,4608,7724,8798,15249,16113,20399, -,-,-,-,-,-,-, 605016 Satellite W-chromosome 585 chrUn_NT_464547v1 2718 3697 GGXHOI 387 - 2718 3697 0 3 370,234,350, 0,383,629, -,-,-, 605018 Satellite W-chromosome 585 chrUn_NT_464547v1 4722 5445 GGXHOI 438 - 4722 5445 0 2 463,243, 0,480, -,-, 605020 Satellite W-chromosome 585 chrUn_NT_464547v1 5534 13079 GGXHOI 362 - 5534 13079 0 14 145,777,2122,239,172,568,490,173,434,181,139,883,702,163, 0,169,978,3120,3381,3581,4163,4716,4919,5386,5601,5754,6661,7382, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 605021 Satellite W-chromosome 585 chrUn_NT_464547v1 13185 18654 GGXHOI 374 - 13185 18654 0 9 813,1770,530,323,297,132,331,194,874, 0,833,2648,3193,3556,3869,4020,4390,4595, -,-,-,-,-,-,-,-,-, 605022 Satellite W-chromosome 585 chrUn_NT_464547v1 18793 22048 GGXHOI 377 - 18793 22048 0 4 124,1233,1442,402, 0,135,1395,2853, -,-,-,-, 605023 Satellite W-chromosome 585 chrUn_NT_464548v1 5841 9221 GGERVL-B-int 718 + 5841 9221 0 5 265,82,942,1550,535, 0,265,347,1295,2845, +,+,+,+,+, 605029 LTR ERVL 585 chrUn_NT_464548v1 13765 13833 (T)n 861 + 13765 13833 0 2 24,27, 0,41, +,+, 605034 Simple_repeat Simple_repeat 585 chrUn_NT_464549v1 3238 5223 GGXHOI 400 - 3238 5223 0 2 481,1487, 0,498, -,-, 605047 Satellite W-chromosome 585 chrUn_NT_464549v1 5761 7749 GGXHOI 403 - 5761 7749 0 2 481,1490, 0,498, -,-, 605050 Satellite W-chromosome 585 chrUn_NT_464549v1 8287 10145 GGXHOI 427 - 8287 10145 0 3 481,733,612, 0,498,1246, -,-,-, 605053 Satellite W-chromosome 585 chrUn_NT_464549v1 10811 12799 GGXHOI 403 - 10811 12799 0 2 481,1490, 0,498, -,-, 605056 Satellite W-chromosome 585 chrUn_NT_464549v1 13336 15323 GGXHOI 401 - 13336 15323 0 2 481,1489, 0,498, -,-, 605059 Satellite W-chromosome 585 chrUn_NT_464549v1 15861 17847 GGXHOI 402 - 15861 17847 0 2 481,1488, 0,498, -,-, 605062 Satellite W-chromosome 585 chrUn_NT_464549v1 18384 20371 GGXHOI 401 - 18384 20371 0 2 481,1489, 0,498, -,-, 605065 Satellite W-chromosome 585 chrUn_NT_464549v1 20908 22895 GGXHOI 401 - 20908 22895 0 2 481,1489, 0,498, -,-, 605068 Satellite W-chromosome 585 chrUn_NT_464549v1 23968 25158 GGXHOI 387 - 23968 25158 0 2 567,600, 0,590, -,-, 605072 Satellite W-chromosome 585 chrUn_NT_464550v1 744 951 G-rich 321 + 744 951 0 2 52,115, 0,92, +,+, 605076 Low_complexity Low_complexity 585 chrUn_NT_464550v1 7697 7848 GA-rich 338 + 7697 7848 0 2 50,19, 0,132, +,+, 605100 Low_complexity Low_complexity 585 chrUn_NT_464551v1 488 3078 GGXHOI 325 - 488 3078 0 5 338,689,219,727,544, 0,359,1067,1302,2046, -,-,-,-,-, 605161 Satellite W-chromosome 585 chrUn_NT_464551v1 4367 4780 GGXHOI 323 - 4367 4780 0 2 262,134, 0,279, -,-, 605164 Satellite W-chromosome 585 chrUn_NT_464551v1 5887 8380 GGXHOI 380 - 5887 8380 0 3 99,708,1609, 0,114,884, -,-,-, 605166 Satellite W-chromosome 585 chrUn_NT_464551v1 8479 14067 GGXHOI 350 - 8479 14067 0 7 1700,766,235,599,1432,214,502, 0,1717,2500,2748,3408,4855,5086, -,-,-,-,-,-,-, 605167 Satellite W-chromosome 585 chrUn_NT_464551v1 14141 25175 GGXHOI 357 - 14141 25175 0 12 1081,146,1469,425,326,140,102,1364,1666,2640,1262,179, 0,1098,1256,2782,3220,3569,3740,3857,5234,6916,9572,10855, -,-,-,-,-,-,-,-,-,-,-,-, 605168 Satellite W-chromosome 585 chrUn_NT_464554v1 3171 3308 (CCCTT)n 356 + 3171 3308 0 2 63,44, 0,93, +,+, 605183 Simple_repeat Simple_repeat 585 chrUn_NT_464555v1 22172 24227 GGXHOI 336 + 22172 24227 0 2 1043,949, 0,1106, +,+, 605218 Satellite W-chromosome 585 chrUn_NT_464557v1 1308 4440 GGLTR7-int 413 + 1308 4440 0 4 116,1648,949,277, 0,116,1859,2855, +,+,+,+, 605230 LTR ERV1 585 chrUn_NT_464557v1 14690 17373 GGLTR7-int 501 + 14690 17373 0 3 116,1639,833, 0,116,1850, +,+,+, 605240 LTR ERV1 585 chrUn_NT_464558v1 1730 2598 GGXHOI 331 + 1730 2598 0 3 112,186,514, 0,148,354, +,+,+, 605248 Satellite W-chromosome 585 chrUn_NT_464558v1 4534 24165 GGXHOI 390 + 4534 24165 0 11 2331,897,1798,2651,2717,1794,835,2723,835,1754,908, 0,2393,3306,5120,7833,10564,12374,13271,16010,16907,18723, +,+,+,+,+,+,+,+,+,+,+, 605252 Satellite W-chromosome 585 chrUn_NT_464559v1 345 2091 GGERVL-A-int 684 + 345 2091 0 2 466,1276, 0,470, +,+, 605255 LTR ERVL 585 chrUn_NT_464559v1 16131 18572 GGLTR7-int 590 + 16131 18572 0 2 338,785, 0,1656, +,+, 605272 LTR ERV1 585 chrUn_NT_464559v1 18745 20895 GGLTR10D-int 876 - 18745 20895 0 2 361,1786, 0,364, -,-, 605275 LTR ERVK 585 chrUn_NT_464559v1 20929 23259 (CGAGG)n 557 + 20929 23259 0 7 177,505,252,256,189,733,102, 0,177,685,969,1242,1454,2228, +,+,+,+,+,+,+, 605277 Simple_repeat Simple_repeat 585 chrUn_NT_464560v1 6747 10076 GGXHOI 405 - 6747 10076 0 2 3047,267, 0,3062, -,-, 605292 Satellite W-chromosome 585 chrUn_NT_464560v1 11167 16830 GGXHOI 407 - 11167 16830 0 4 284,1895,355,3008, 0,315,2241,2655, -,-,-,-, 605294 Satellite W-chromosome 585 chrUn_NT_464560v1 20347 25004 GGXHOI 396 - 20347 25004 0 4 316,3244,433,535, 0,375,3674,4122, -,-,-,-, 605298 Satellite W-chromosome 585 chrUn_NT_464562v1 10282 13251 GGLTR7-int 408 + 10282 13251 0 5 116,294,1062,937,276, 0,116,557,1709,2693, +,+,+,+,+, 605393 LTR ERV1 585 chrUn_NT_464562v1 23144 24874 GGLTR7-int 517 + 23144 24874 0 2 116,1614, 0,116, +,+, 605403 LTR ERV1 585 chrUn_NT_464563v1 1100 5791 GGXHOI 384 + 1100 5791 0 3 1519,944,2165, 0,1565,2526, +,+,+, 605405 Satellite W-chromosome 585 chrUn_NT_464564v1 17485 18754 CR1-H 594 + 17485 18754 0 2 1158,111, 0,1158, +,+, 605432 LINE CR1 585 chrUn_NT_464564v1 21499 22127 CR1-H 683 + 21499 22127 0 2 470,139, 0,489, +,+, 605435 LINE CR1 585 chrUn_NT_464565v1 1243 2235 GGXHOI 391 - 1243 2235 0 2 561,412, 0,580, -,-, 605438 Satellite W-chromosome 585 chrUn_NT_464565v1 2319 3304 GGXHOI 390 - 2319 3304 0 2 559,407, 0,578, -,-, 605439 Satellite W-chromosome 585 chrUn_NT_464565v1 3386 4145 GGXHOI 407 - 3386 4145 0 3 332,148,250, 0,346,509, -,-,-, 605440 Satellite W-chromosome 585 chrUn_NT_464565v1 4227 5223 GGXHOI 395 - 4227 5223 0 2 647,334, 0,662, -,-, 605441 Satellite W-chromosome 585 chrUn_NT_464565v1 5309 9252 GGXHOI 375 - 5309 9252 0 5 613,112,1161,1063,937, 0,627,752,1928,3006, -,-,-,-,-, 605442 Satellite W-chromosome 585 chrUn_NT_464565v1 9333 12030 GGXHOI 372 - 9333 12030 0 5 616,556,1060,148,249, 0,629,1204,2285,2448, -,-,-,-,-, 605443 Satellite W-chromosome 585 chrUn_NT_464565v1 12115 19638 GGXHOI 396 - 12115 19638 0 8 2041,1650,817,933,185,522,769,413, 0,2054,3755,4592,5541,5776,6322,7110, -,-,-,-,-,-,-,-, 605444 Satellite W-chromosome 585 chrUn_NT_464565v1 19723 22159 GGXHOI 382 - 19723 22159 0 2 1442,947, 0,1489, -,-, 605445 Satellite W-chromosome 585 chrUn_NT_464565v1 22245 23259 GGXHOI 410 - 22245 23259 0 2 438,562, 0,452, -,-, 605446 Satellite W-chromosome 585 chrUn_NT_464565v1 23737 24957 GGXHOI 399 - 23737 24957 0 2 558,651, 0,569, -,-, 605450 Satellite W-chromosome 585 chrUn_NT_464566v1 17573 20030 GGLTR7-int 598 + 17573 20030 0 2 337,790, 0,1667, +,+, 605473 LTR ERV1 585 chrUn_NT_464566v1 20042 22462 GGERV10_LTR 797 - 20042 22462 0 2 38,40, 0,2380, -,-, 605476 LTR ERVL 585 chrUn_NT_464566v1 20208 22421 GGLTR10D-int 937 - 20208 22421 0 2 363,1844, 0,369, -,-, 605477 LTR ERVK 585 chrUn_NT_464566v1 23081 23681 (CGAGG)n 532 + 23081 23681 0 3 183,180,197, 0,212,403, +,+,+, 605479 Simple_repeat Simple_repeat 585 chrUn_NT_464566v1 23745 24117 (CGAGG)n 526 + 23745 24117 0 2 175,175, 0,197, +,+, 605480 Simple_repeat Simple_repeat 585 chrUn_NT_464567v1 412 11557 GGXHOI 476 + 412 11557 0 12 1014,228,1047,1415,838,1834,431,500,728,831,266,1799, 0,1036,1279,2343,3780,4638,6487,6937,7461,8211,9058,9346, +,+,+,+,+,+,+,+,+,+,+,+, 605485 Satellite W-chromosome 585 chrUn_NT_464567v1 11582 14274 GGLTR3F1 957 - 11582 14274 0 2 494,2198, 0,494, -,-, 605486 LTR ERVL 585 chrUn_NT_464567v1 14260 17515 GGERVL-A-int 790 - 14260 17515 0 3 560,494,2200, 0,561,1055, -,-,-, 605487 LTR ERVL 585 chrUn_NT_464567v1 17501 20719 GGERVL-A-int 782 - 17501 20719 0 3 559,493,2165, 0,560,1053, -,-,-, 605488 LTR ERVL 585 chrUn_NT_464567v1 20707 22949 GGERVL-A-int 771 - 20707 22949 0 3 560,497,1184, 0,561,1058, -,-,-, 605489 LTR ERVL 585 chrUn_NT_464568v1 894 1367 (CAAGG)n 468 + 894 1367 0 2 228,59, 0,414, +,+, 605499 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 1474 2270 (CAAGG)n 522 + 1474 2270 0 3 369,184,216, 0,384,580, +,+,+, 605501 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 3774 4186 (CAAGG)n 547 + 3774 4186 0 3 46,77,191, 0,144,221, +,+,+, 605508 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 4658 5294 (CCTTG)n 476 + 4658 5294 0 2 180,429, 0,207, +,+, 605512 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 5647 6098 (CAAGG)n 535 + 5647 6098 0 2 223,215, 0,236, +,+, 605514 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 7603 8015 (CAAGG)n 547 + 7603 8015 0 3 46,77,191, 0,144,221, +,+,+, 605521 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 8487 9123 (CCTTG)n 476 + 8487 9123 0 2 180,429, 0,207, +,+, 605525 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 9476 9927 (CAAGG)n 540 + 9476 9927 0 2 223,228, 0,223, +,+, 605527 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 11431 11844 (CAAGG)n 541 + 11431 11844 0 2 185,215, 0,198, +,+, 605533 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 12020 12367 (GCCTG)n 470 + 12020 12367 0 2 100,73, 0,274, +,+, 605535 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 12321 12957 (CCTTG)n 476 + 12321 12957 0 2 180,429, 0,207, +,+, 605537 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 13309 13769 (CAAGG)n 523 + 13309 13769 0 2 222,238, 0,222, +,+, 605539 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 15423 15921 (CAAGG)n 444 + 15423 15921 0 2 225,235, 0,263, +,+, 605543 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 16764 17396 (CCTTG)n 461 + 16764 17396 0 2 446,173, 0,459, +,+, 605547 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 18961 19896 (CCTTG)n 544 + 18961 19896 0 4 179,254,184,222, 0,195,511,713, +,+,+,+, 605552 Simple_repeat Simple_repeat 585 chrUn_NT_464568v1 21184 23981 GGXHOI 359 - 21184 23981 0 5 142,403,864,296,1020, 0,172,588,1470,1777, -,-,-,-,-, 605555 Satellite W-chromosome 585 chrUn_NT_464570v1 9068 13740 CR1-D2 571 - 9068 13740 0 2 569,800, 0,3872, -,-, 605563 LINE CR1 585 chrUn_NT_464570v1 10321 12957 CR1-D 648 - 10321 12957 0 2 1643,993, 0,1643, -,-, 605564 LINE CR1 585 chrUn_NT_464570v1 13739 13982 Char12Mar1_GG 481 - 13739 13982 0 2 70,173, 0,70, -,-, 605565 DNA hAT-Charlie 585 chrUn_NT_464571v1 2841 4177 CR1-H 629 + 2841 4177 0 2 1227,109, 0,1227, +,+, 605569 LINE CR1 585 chrUn_NT_464571v1 6716 7337 CR1-H 657 + 6716 7337 0 2 474,138, 0,483, +,+, 605572 LINE CR1 585 chrUn_NT_464571v1 18329 21697 CR1-H 517 + 18329 21697 0 3 1155,113,430, 0,1155,2938, +,+,+, 605583 LINE CR1 585 chrUn_NT_464572v1 1036 1463 CR1-C2 656 - 1036 1463 0 2 65,280, 0,147, -,-, 605591 LINE CR1 585 chrUn_NT_464572v1 6679 9787 GGLTR7-int 421 + 6679 9787 0 4 116,1624,949,277, 0,116,1835,2831, +,+,+,+, 605596 LTR ERV1 585 chrUn_NT_464572v1 17969 21090 GGLTR7-int 416 + 17969 21090 0 4 116,1637,949,277, 0,116,1848,2844, +,+,+,+, 605605 LTR ERV1 585 chrUn_NT_464573v1 878 1287 (CGAGG)n 567 + 878 1287 0 2 182,177, 0,232, +,+, 605614 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 1743 2995 (CGAGG)n 536 + 1743 2995 0 3 175,689,178, 0,349,1074, +,+,+, 605617 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 3182 4800 (CGAGG)n 555 + 3182 4800 0 3 178,1175,181, 0,223,1437, +,+,+, 605620 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 5687 6322 (CGAGG)n 492 + 5687 6322 0 3 184,184,182, 0,209,453, +,+,+, 605626 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 6393 8970 (CGAGG)n 504 + 6393 8970 0 3 465,1904,183, 0,478,2394, +,+,+, 605627 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 10214 10606 (CGAGG)n 456 + 10214 10606 0 2 186,186, 0,206, +,+, 605634 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 11421 13152 (CGAGG)n 488 + 11421 13152 0 6 352,239,314,183,183,178, 0,409,823,1157,1355,1553, +,+,+,+,+,+, 605636 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 15008 15618 (CGAGG)n 568 + 15008 15618 0 3 172,175,178, 0,226,432, +,+,+, 605647 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 15723 17044 (CGAGG)n 519 + 15723 17044 0 3 467,266,401, 0,488,920, +,+,+, 605649 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 17735 18303 (CGAGG)n 541 + 17735 18303 0 2 350,180, 0,388, +,+, 605654 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 20158 20747 (CGAGG)n 518 + 20158 20747 0 2 100,313, 0,276, +,+, 605662 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 20846 21836 (CGAGG)n 525 + 20846 21836 0 2 798,178, 0,812, +,+, 605665 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 22426 23811 (CGAGG)n 575 + 22426 23811 0 3 644,317,227, 0,660,1158, +,+,+, 605671 Simple_repeat Simple_repeat 585 chrUn_NT_464573v1 23867 24864 (CGAGG)n 561 + 23867 24864 0 2 177,763, 0,234, +,+, 605674 Simple_repeat Simple_repeat 585 chrUn_NT_464574v1 6200 7690 GGLTR7B 574 + 6200 7690 0 2 896,126, 0,1364, +,+, 605684 LTR ERV1 585 chrUn_NT_464574v1 9847 12000 CR1-C 864 + 9847 12000 0 2 1545,608, 0,1545, +,+, 605688 LINE CR1 585 chrUn_NT_464576v1 570 1065 GGXHOI 582 + 570 1065 0 2 149,17, 0,478, +,+, 605702 Satellite W-chromosome 585 chrUn_NT_464576v1 1132 2159 GGXHOI 471 + 1132 2159 0 2 860,154, 0,873, +,+, 605704 Satellite W-chromosome 585 chrUn_NT_464576v1 2235 2977 GGXHOI 536 + 2235 2977 0 2 207,309, 0,433, +,+, 605705 Satellite W-chromosome 585 chrUn_NT_464576v1 3385 5320 GGXHOI 568 + 3385 5320 0 3 203,301,850, 0,456,1085, +,+,+, 605708 Satellite W-chromosome 585 chrUn_NT_464576v1 5728 6490 GGXHOI 602 + 5728 6490 0 2 203,307, 0,455, +,+, 605712 Satellite W-chromosome 585 chrUn_NT_464576v1 6900 11183 GGXHOI 558 + 6900 11183 0 9 203,233,290,69,117,290,300,290,308, 0,522,1086,1696,1811,2260,2801,3434,3975, +,+,+,+,+,+,+,+,+, 605715 Satellite W-chromosome 585 chrUn_NT_464576v1 11592 13613 GGXHOI 566 + 11592 13613 0 5 203,69,117,289,327, 0,522,637,1086,1694, +,+,+,+,+, 605724 Satellite W-chromosome 585 chrUn_NT_464576v1 13655 17365 GGXHOI 510 + 13655 17365 0 5 663,166,289,1476,19, 0,872,1367,1906,3691, +,+,+,+,+, 605729 Satellite W-chromosome 585 chrUn_NT_464576v1 17440 18511 GGXHOI 558 + 17440 18511 0 2 279,560, 0,511, +,+, 605734 Satellite W-chromosome 585 chrUn_NT_464576v1 18586 19405 GGXHOI 553 + 18586 19405 0 2 565,237, 0,582, +,+, 605736 Satellite W-chromosome 585 chrUn_NT_464576v1 19447 21666 GGXHOI 496 + 19447 21666 0 4 586,132,438,335, 0,877,1179,1884, +,+,+,+, 605738 Satellite W-chromosome 585 chrUn_NT_464576v1 23030 24810 GGXHOI 526 + 23030 24810 0 4 278,233,287,175, 0,514,1066,1605, +,+,+,+, 605745 Satellite W-chromosome 585 chrUn_NT_464577v1 9057 9707 ENS1-int 375 - 9057 9707 0 2 104,115, 0,535, -,-, 605752 LTR ERVL 585 chrUn_NT_464577v1 16421 17083 ENS1-int 343 + 16421 17083 0 2 126,203, 0,459, +,+, 605762 LTR ERVL 585 chrUn_NT_464579v1 611 1802 GGXHOI 329 + 611 1802 0 3 350,216,554, 0,404,637, +,+,+, 605775 Satellite W-chromosome 585 chrUn_NT_464579v1 3409 4613 GGXHOI 342 + 3409 4613 0 3 253,168,716, 0,300,488, +,+,+, 605777 Satellite W-chromosome 585 chrUn_NT_464579v1 4716 7634 GGXHOI 372 + 4716 7634 0 2 1846,1009, 0,1909, +,+, 605778 Satellite W-chromosome 585 chrUn_NT_464579v1 8915 10579 GGXHOI 392 + 8915 10579 0 2 1085,516, 0,1148, +,+, 605780 Satellite W-chromosome 585 chrUn_NT_464579v1 13302 16363 GGXHOI 383 + 13302 16363 0 2 1043,1956, 0,1105, +,+, 605784 Satellite W-chromosome 585 chrUn_NT_464579v1 20962 22171 GGXHOI 385 + 20962 22171 0 2 633,513, 0,696, +,+, 605790 Satellite W-chromosome 585 chrUn_NT_464580v1 7070 7918 Z-REP 530 - 7070 7918 0 2 323,441, 0,407, -,-, 605798 Satellite macro 585 chrUn_NT_464580v1 11647 12061 CR1-Y 724 - 11647 12061 0 2 401,13, 0,401, -,-, 605804 LINE CR1 585 chrUn_NT_464580v1 17319 22047 CR1-D2 564 - 17319 22047 0 2 572,803, 0,3925, -,-, 605807 LINE CR1 585 chrUn_NT_464580v1 18351 21257 CR1-D 669 - 18351 21257 0 2 2797,109, 0,2797, -,-, 605808 LINE CR1 585 chrUn_NT_464581v1 189 4789 CR1-F 502 + 189 4789 0 14 202,155,200,191,163,184,199,203,207,202,162,196,194,176, 0,467,908,1149,1381,1813,2039,2536,2781,3030,3499,3952,4189,4424, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 605812 LINE CR1 585 chrUn_NT_464581v1 4833 5743 CR1-F 617 + 4833 5743 0 4 176,189,195,214, 0,221,452,696, +,+,+,+, 605819 LINE CR1 585 chrUn_NT_464581v1 5786 7857 CR1-F 545 + 5786 7857 0 7 205,195,180,155,203,203,178, 0,247,734,959,1404,1648,1893, +,+,+,+,+,+,+, 605820 LINE CR1 585 chrUn_NT_464581v1 7901 12088 CR1-F 572 + 7901 12088 0 13 179,191,199,202,204,204,159,200,180,156,204,203,181, 0,224,457,955,1199,1445,1916,2365,2842,3066,3515,3761,4006, +,+,+,+,+,+,+,+,+,+,+,+,+, 605823 LINE CR1 585 chrUn_NT_464581v1 12132 16352 CR1-F 547 + 12132 16352 0 12 181,191,200,203,204,204,155,198,209,155,200,200, 0,227,460,958,1203,1449,1921,2366,2622,3099,3542,4020, +,+,+,+,+,+,+,+,+,+,+,+, 605829 LINE CR1 585 chrUn_NT_464581v1 16654 20353 CR1-F 524 + 16654 20353 0 11 201,204,204,159,199,181,154,203,205,155,205, 0,244,491,964,1412,1905,2130,2579,2824,3296,3494, +,+,+,+,+,+,+,+,+,+,+, 605837 LINE CR1 585 chrUn_NT_464581v1 20609 22704 CR1-F 497 + 20609 22704 0 6 185,197,204,205,154,203, 0,228,730,1232,1693,1892, +,+,+,+,+,+, 605844 LINE CR1 585 chrUn_NT_464581v1 22746 24797 CR1-F 576 + 22746 24797 0 8 199,175,142,196,203,179,157,58, 0,476,683,1085,1323,1568,1791,1993, +,+,+,+,+,+,+,+, 605848 LINE CR1 585 chrUn_NT_464582v1 188 6010 GGXHOI 406 - 188 6010 0 5 2518,187,2373,141,545, 0,2532,2731,5119,5277, -,-,-,-,-, 605852 Satellite W-chromosome 585 chrUn_NT_464582v1 6136 6499 GGXHOI 386 - 6136 6499 0 2 178,169, 0,194, -,-, 605853 Satellite W-chromosome 585 chrUn_NT_464582v1 6570 8105 GGXHOI 349 - 6570 8105 0 2 1184,335, 0,1200, -,-, 605854 Satellite W-chromosome 585 chrUn_NT_464582v1 8394 24769 GGXHOI 380 - 8394 24769 0 7 460,9976,478,2601,1913,633,171, 0,477,10475,10965,13595,15537,16204, -,-,-,-,-,-,-, 605855 Satellite W-chromosome 585 chrUn_NT_464583v1 9652 24737 GGXHOI 385 - 9652 24737 0 4 1430,162,4053,9313, 0,1483,1678,5772, -,-,-,-, 605858 Satellite W-chromosome 585 chrUn_NT_464585v1 1710 8276 GGXHOI 424 - 1710 8276 0 4 2106,1761,1523,1116, 0,2126,3904,5450, -,-,-,-, 605933 Satellite W-chromosome 585 chrUn_NT_464586v1 3941 5209 CR1-H 603 - 3941 5209 0 2 117,1151, 0,117, -,-, 605946 LINE CR1 585 chrUn_NT_464586v1 6952 7061 (TTTGC)n 326 + 6952 7061 0 2 52,8, 0,101, +,+, 605947 Simple_repeat Simple_repeat 585 chrUn_NT_464586v1 16265 16877 CR1-H 669 - 16265 16877 0 2 137,469, 0,143, -,-, 605957 LINE CR1 585 chrUn_NT_464586v1 19245 20542 CR1-H 537 - 19245 20542 0 2 116,1181, 0,116, -,-, 605960 LINE CR1 585 chrUn_NT_464587v1 16972 17081 (C)n 724 + 16972 17081 0 2 26,38, 0,71, +,+, 606001 Simple_repeat Simple_repeat 585 chrUn_NT_464588v1 1721 2166 (CAAGG)n 553 + 1721 2166 0 2 198,194, 0,251, +,+, 606027 Simple_repeat Simple_repeat 585 chrUn_NT_464588v1 3096 4009 (CAAGG)n 654 + 3096 4009 0 3 370,121,178, 0,594,735, +,+,+, 606035 Simple_repeat Simple_repeat 585 chrUn_NT_464588v1 4060 5855 (CAAGG)n 634 + 4060 5855 0 6 130,164,220,255,307,163, 0,308,488,708,978,1632, +,+,+,+,+,+, 606038 Simple_repeat Simple_repeat 585 chrUn_NT_464588v1 5883 6518 (CAAGG)n 608 + 5883 6518 0 3 228,11,38, 0,407,597, +,+,+, 606042 Simple_repeat Simple_repeat 585 chrUn_NT_464588v1 7768 9676 GGXHOI 412 + 7768 9676 0 2 453,1432, 0,476, +,+, 606050 Satellite W-chromosome 585 chrUn_NT_464588v1 9709 11621 GGXHOI 410 + 9709 11621 0 2 453,1436, 0,476, +,+, 606052 Satellite W-chromosome 585 chrUn_NT_464588v1 17511 19433 GGXHOI 400 + 17511 19433 0 2 459,1440, 0,482, +,+, 606061 Satellite W-chromosome 585 chrUn_NT_464588v1 23356 24441 GGXHOI 383 + 23356 24441 0 2 274,793, 0,292, +,+, 606069 Satellite W-chromosome 585 chrUn_NT_464589v1 8159 9526 GGLTR7-int 350 - 8159 9526 0 3 281,315,69, 0,981,1298, -,-,-, 606075 LTR ERV1 585 chrUn_NT_464589v1 9519 12087 GGERVL-B-int 713 - 9519 12087 0 4 751,1074,64,318, 0,751,1825,2250, -,-,-,-, 606076 LTR ERVL 585 chrUn_NT_464589v1 14448 15495 GGLTR7A 762 - 14448 15495 0 2 584,462, 0,585, -,-, 606080 LTR ERV1 585 chrUn_NT_464589v1 16020 16447 GGLTR7A 886 - 16020 16447 0 2 253,174, 0,253, -,-, 606082 LTR ERV1 585 chrUn_NT_464589v1 17142 17607 (CAAGG)n 544 + 17142 17607 0 2 257,24, 0,441, +,+, 606086 Simple_repeat Simple_repeat 585 chrUn_NT_464589v1 18231 18722 (CAAGG)n 531 + 18231 18722 0 2 232,259, 0,232, +,+, 606091 Simple_repeat Simple_repeat 585 chrUn_NT_464589v1 18918 19616 (CAGGC)n 481 + 18918 19616 0 2 490,204, 0,494, +,+, 606094 Simple_repeat Simple_repeat 585 chrUn_NT_464589v1 20592 21249 (CAGGC)n 481 + 20592 21249 0 2 314,343, 0,314, +,+, 606102 Simple_repeat Simple_repeat 585 chrUn_NT_464589v1 21129 21552 (CAAGG)n 596 + 21129 21552 0 2 137,103, 0,320, +,+, 606103 Simple_repeat Simple_repeat 585 chrUn_NT_464590v1 1005 8939 GGXHOI 415 + 1005 8939 0 7 1269,479,1473,2375,1157,283,770, 0,1288,1778,3264,5671,6870,7164, +,+,+,+,+,+,+, 606112 Satellite W-chromosome 585 chrUn_NT_464590v1 9081 9727 GGXHOI 412 + 9081 9727 0 2 263,366, 0,280, +,+, 606113 Satellite W-chromosome 585 chrUn_NT_464590v1 9880 10639 GGXHOI 387 + 9880 10639 0 2 514,228, 0,531, +,+, 606114 Satellite W-chromosome 585 chrUn_NT_464590v1 10756 11364 GGXHOI 323 + 10756 11364 0 2 426,165, 0,443, +,+, 606115 Satellite W-chromosome 585 chrUn_NT_464590v1 11446 24647 GGXHOI 449 + 11446 24647 0 8 455,1242,3321,2930,1430,317,2343,948, 0,495,1753,5091,8037,9530,9863,12253, +,+,+,+,+,+,+,+, 606116 Satellite W-chromosome 585 chrUn_NT_464591v1 1536 6426 CR1-D2 527 + 1536 6426 0 2 766,572, 0,4318, +,+, 606119 LINE CR1 585 chrUn_NT_464592v1 7830 9566 GGXHOI 321 - 7830 9566 0 3 1178,254,252, 0,1214,1484, -,-,-, 606135 Satellite W-chromosome 585 chrUn_NT_464592v1 9994 11821 GGXHOI 355 - 9994 11821 0 3 321,542,932, 0,337,895, -,-,-, 606136 Satellite W-chromosome 585 chrUn_NT_464592v1 11947 13292 GGXHOI 372 - 11947 13292 0 3 878,219,211, 0,895,1134, -,-,-, 606137 Satellite W-chromosome 585 chrUn_NT_464592v1 13403 14723 GGXHOI 320 - 13403 14723 0 2 722,582, 0,738, -,-, 606138 Satellite W-chromosome 585 chrUn_NT_464592v1 15611 16600 GGXHOI 363 - 15611 16600 0 3 416,125,372, 0,433,617, -,-,-, 606140 Satellite W-chromosome 585 chrUn_NT_464592v1 16682 18777 GGXHOI 351 - 16682 18777 0 3 1186,528,347, 0,1204,1748, -,-,-, 606141 Satellite W-chromosome 585 chrUn_NT_464592v1 19984 24602 GGXHOI 339 - 19984 24602 0 7 383,320,1022,127,1022,501,1060, 0,399,772,1809,1987,3026,3558, -,-,-,-,-,-,-, 606143 Satellite W-chromosome 585 chrUn_NT_464594v1 909 13816 GGXHOI 415 - 909 13816 0 2 9717,3157, 0,9750, -,-, 606166 Satellite W-chromosome 585 chrUn_NT_464594v1 13890 21939 GGXHOI 385 - 13890 21939 0 4 4204,851,2526,362, 0,4248,5146,7687, -,-,-,-, 606167 Satellite W-chromosome 585 chrUn_NT_464594v1 22051 24558 GGXHOI 420 - 22051 24558 0 2 172,2282, 0,225, -,-, 606168 Satellite W-chromosome 585 chrUn_NT_464595v1 11741 16700 CR1-D2 573 - 11741 16700 0 2 572,808, 0,4151, -,-, 606176 LINE CR1 585 chrUn_NT_464595v1 12999 15907 CR1-D 684 - 12999 15907 0 2 2799,106, 0,2802, -,-, 606177 LINE CR1 585 chrUn_NT_464596v1 4915 9956 GGXHOI 512 - 4915 9956 0 5 1666,501,150,140,2492, 0,1678,2208,2369,2549, -,-,-,-,-, 606183 Satellite W-chromosome 585 chrUn_NT_464596v1 10032 11696 GGXHOI 531 - 10032 11696 0 2 1260,342, 0,1322, -,-, 606184 Satellite W-chromosome 585 chrUn_NT_464596v1 13885 16242 GGXHOI 464 - 13885 16242 0 2 293,2021, 0,336, -,-, 606189 Satellite W-chromosome 585 chrUn_NT_464596v1 16308 19173 GGXHOI 556 - 16308 19173 0 3 1718,567,357, 0,1739,2508, -,-,-, 606190 Satellite W-chromosome 585 chrUn_NT_464596v1 19239 20791 GGXHOI 562 - 19239 20791 0 2 1007,359, 0,1193, -,-, 606192 Satellite W-chromosome 585 chrUn_NT_464597v1 23048 24028 GGXHOI 362 - 23048 24028 0 2 299,642, 0,338, -,-, 606216 Satellite W-chromosome 585 chrUn_NT_464598v1 1342 2089 (CCCGC)n 216 + 1342 2089 0 2 650,45, 0,702, +,+, 606225 Simple_repeat Simple_repeat 585 chrUn_NT_464598v1 2621 3531 (CCTCG)n 529 + 2621 3531 0 3 188,286,128, 0,226,782, +,+,+, 606230 Simple_repeat Simple_repeat 585 chrUn_NT_464598v1 3570 5780 GGLTR10D-int 904 + 3570 5780 0 2 1843,364, 0,1846, +,+, 606233 LTR ERVK 585 chrUn_NT_464598v1 9772 10002 G-rich 434 + 9772 10002 0 2 38,142, 0,88, +,+, 606237 Low_complexity Low_complexity 585 chrUn_NT_464599v1 10651 11918 CR1-H 594 + 10651 11918 0 2 1155,112, 0,1155, +,+, 606256 LINE CR1 585 chrUn_NT_464599v1 14260 14876 CR1-H 659 + 14260 14876 0 2 473,137, 0,479, +,+, 606260 LINE CR1 585 chrUn_NT_464600v1 5502 8592 GGLTR7-int 411 + 5502 8592 0 4 115,1607,948,277, 0,116,1818,2813, +,+,+,+, 606273 LTR ERV1 585 chrUn_NT_464600v1 24031 24286 GGLTR7-int 393 + 24031 24286 0 2 109,145, 0,110, +,+, 606286 LTR ERV1 585 chrUn_NT_464601v1 6205 9707 GGXHOI 572 - 6205 9707 0 2 394,2499, 0,1003, -,-, 606294 Satellite W-chromosome 585 chrUn_NT_464601v1 9734 14057 GGXHOI 532 - 9734 14057 0 6 409,61,44,186,290,486, 0,644,913,2118,2601,3837, -,-,-,-,-,-, 606297 Satellite W-chromosome 585 chrUn_NT_464601v1 14100 17874 GGXHOI 548 - 14100 17874 0 3 1712,168,330, 0,2658,3444, -,-,-, 606303 Satellite W-chromosome 585 chrUn_NT_464601v1 17916 24473 GGXHOI 562 - 17916 24473 0 3 899,131,368, 0,4181,6189, -,-,-, 606307 Satellite W-chromosome 585 chrUn_NT_464602v1 3415 4325 GGXHOI 380 - 3415 4325 0 2 561,335, 0,575, -,-, 606314 Satellite W-chromosome 585 chrUn_NT_464602v1 4449 5402 GGXHOI 395 - 4449 5402 0 3 350,226,342, 0,374,611, -,-,-, 606315 Satellite W-chromosome 585 chrUn_NT_464602v1 8005 9000 GGXHOI 352 - 8005 9000 0 3 404,323,165, 0,453,830, -,-,-, 606318 Satellite W-chromosome 585 chrUn_NT_464602v1 10135 10377 GGXHOI 419 - 10135 10377 0 2 74,143, 0,99, -,-, 606322 Satellite W-chromosome 585 chrUn_NT_464602v1 11860 13421 GGXHOI 361 - 11860 13421 0 3 955,249,331, 0,970,1230, -,-,-, 606325 Satellite W-chromosome 585 chrUn_NT_464602v1 13450 15445 GGXHOI 368 - 13450 15445 0 5 286,195,420,784,219, 0,307,532,965,1776, -,-,-,-,-, 606327 Satellite W-chromosome 585 chrUn_NT_464602v1 15749 17528 GGXHOI 367 - 15749 17528 0 3 1148,181,404, 0,1178,1375, -,-,-, 606328 Satellite W-chromosome 585 chrUn_NT_464602v1 18663 19659 GGXHOI 392 - 18663 19659 0 2 563,412, 0,584, -,-, 606330 Satellite W-chromosome 585 chrUn_NT_464602v1 21273 22186 GGXHOI 408 - 21273 22186 0 3 479,148,251, 0,499,662, -,-,-, 606332 Satellite W-chromosome 585 chrUn_NT_464602v1 22270 24451 GGXHOI 403 - 22270 24451 0 3 1405,635,107, 0,1426,2074, -,-,-, 606333 Satellite W-chromosome 585 chrUn_NT_464603v1 8761 14219 GGERV10_LTR 894 + 8761 14219 0 2 219,5238, 0,220, +,+, 606345 LTR ERVL 585 chrUn_NT_464603v1 18898 19985 CR1-G 353 + 18898 19985 0 2 182,185, 0,902, +,+, 606356 LINE CR1 585 chrUn_NT_464604v1 15973 20293 GGXHOI 373 + 15973 20293 0 3 2412,424,1411, 0,2468,2909, +,+,+, 606363 Satellite W-chromosome 585 chrUn_NT_464604v1 20321 21273 GGXHOI 387 + 20321 21273 0 3 68,117,697, 0,82,255, +,+,+, 606365 Satellite W-chromosome 585 chrUn_NT_464604v1 21438 24419 GGXHOI 380 + 21438 24419 0 3 264,2227,457, 0,280,2524, +,+,+, 606366 Satellite W-chromosome 585 chrUn_NT_464605v1 505 2280 Z-REP 553 + 505 2280 0 3 247,849,303, 0,538,1472, +,+,+, 606368 Satellite macro 585 chrUn_NT_464605v1 14517 15166 CR1-X2 592 - 14517 15166 0 2 63,356, 0,293, -,-, 606377 LINE CR1 585 chrUn_NT_464606v1 943 1338 (CCTTG)n 426 + 943 1338 0 2 179,186, 0,209, +,+, 606395 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 1987 2960 GGXHOI 347 - 1987 2960 0 2 296,642, 0,331, -,-, 606397 Satellite W-chromosome 585 chrUn_NT_464606v1 4173 5152 GGXHOI 327 - 4173 5152 0 2 543,395, 0,584, -,-, 606399 Satellite W-chromosome 585 chrUn_NT_464606v1 10563 11464 (CCTTG)n 460 + 10563 11464 0 4 250,176,195,214, 0,274,477,687, +,+,+,+, 606407 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 11734 12243 (CAAGG)n 489 + 11734 12243 0 2 313,196, 0,313, +,+, 606409 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 12300 12946 (CCTTG)n 490 + 12300 12946 0 2 274,360, 0,286, +,+, 606410 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 15349 15849 (CCTTG)n 522 + 15349 15849 0 2 182,295, 0,205, +,+, 606417 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 15862 16187 (CCTTG)n 462 + 15862 16187 0 2 111,26, 0,299, +,+, 606419 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 16507 16972 (CAAGG)n 502 + 16507 16972 0 2 225,240, 0,225, +,+, 606421 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 17042 17709 (CCTTG)n 520 + 17042 17709 0 3 158,49,269, 0,327,398, +,+,+, 606422 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 18344 18613 (CAAGG)n 654 + 18344 18613 0 2 46,223, 0,46, +,+, 606429 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 20144 20749 (CCTTG)n 506 + 20144 20749 0 2 226,351, 0,254, +,+, 606439 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 23006 23275 (CAAGG)n 654 + 23006 23275 0 2 46,223, 0,46, +,+, 606449 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 23202 23543 (CAGGC)n 352 + 23202 23543 0 2 90,73, 0,268, +,+, 606450 Simple_repeat Simple_repeat 585 chrUn_NT_464606v1 23798 24327 (CAAGG)n 558 + 23798 24327 0 2 336,193, 0,336, +,+, 606454 Simple_repeat Simple_repeat 585 chrUn_NT_464607v1 23777 24056 GGLTR7-int 474 + 23777 24056 0 2 119,160, 0,119, +,+, 606482 LTR ERV1 585 chrUn_NT_464608v1 21037 24019 GGXHOI 390 + 21037 24019 0 2 1194,1775, 0,1207, +,+, 606486 Satellite W-chromosome 585 chrUn_NT_464609v1 3081 3706 CR1-H 689 + 3081 3706 0 2 468,138, 0,487, +,+, 606491 LINE CR1 585 chrUn_NT_464609v1 14588 15218 CR1-C 704 - 14588 15218 0 2 65,565, 0,65, -,-, 606503 LINE CR1 585 chrUn_NT_464609v1 18220 19474 CR1-H 647 + 18220 19474 0 2 1149,71, 0,1183, +,+, 606507 LINE CR1 585 chrUn_NT_464609v1 21413 22036 CR1-H 688 + 21413 22036 0 2 466,138, 0,485, +,+, 606510 LINE CR1 585 chrUn_NT_464610v1 4963 6412 GGLTR5A 384 + 4963 6412 0 2 395,159, 0,1290, +,+, 606516 LTR ERVL 585 chrUn_NT_464610v1 6949 7326 GGLTR4A 572 + 6949 7326 0 2 231,118, 0,259, +,+, 606521 LTR ERVL 585 chrUn_NT_464610v1 7430 10659 CR1-C2 643 - 7430 10659 0 2 91,3138, 0,91, -,-, 606523 LINE CR1 585 chrUn_NT_464610v1 12380 14839 GGERV28_I-int 184 - 12380 14839 0 2 311,138, 0,2321, -,-, 606524 LTR ERVK 585 chrUn_NT_464610v1 16897 17740 GGLTR7-int 801 - 16897 17740 0 3 349,260,212, 0,349,631, -,-,-, 606529 LTR ERV1 585 chrUn_NT_464610v1 17975 21716 GGERV28_I-int 66 - 17975 21716 0 2 1994,1383, 0,2358, -,-, 606530 LTR ERVK 585 chrUn_NT_464611v1 3770 4930 GGXHOI 404 - 3770 4930 0 2 839,302, 0,858, -,-, 606534 Satellite W-chromosome 585 chrUn_NT_464611v1 5524 13385 GGXHOI 397 - 5524 13385 0 6 380,2285,259,349,182,4218, 0,413,2715,3031,3423,3643, -,-,-,-,-,-, 606536 Satellite W-chromosome 585 chrUn_NT_464611v1 13869 18883 GGXHOI 397 - 13869 18883 0 5 625,263,1451,1783,803, 0,647,928,2405,4211, -,-,-,-,-, 606538 Satellite W-chromosome 585 chrUn_NT_464611v1 18979 20828 GGXHOI 371 - 18979 20828 0 3 1385,286,138, 0,1401,1711, -,-,-, 606539 Satellite W-chromosome 585 chrUn_NT_464611v1 20938 22421 GGXHOI 351 - 20938 22421 0 3 525,510,370, 0,541,1113, -,-,-, 606540 Satellite W-chromosome 585 chrUn_NT_464612v1 121 624 (CCTTG)n 532 + 121 624 0 3 174,181,119, 0,192,384, +,+,+, 606543 Simple_repeat Simple_repeat 585 chrUn_NT_464612v1 22548 22974 (CCTTG)n 449 + 22548 22974 0 2 54,357, 0,69, +,+, 606545 Simple_repeat Simple_repeat 585 chrUn_NT_464614v1 4624 5673 GGXHOI 388 + 4624 5673 0 2 470,516, 0,533, +,+, 606558 Satellite W-chromosome 585 chrUn_NT_464614v1 5772 6823 GGXHOI 392 + 5772 6823 0 2 472,516, 0,535, +,+, 606559 Satellite W-chromosome 585 chrUn_NT_464614v1 8644 10267 GGXHOI 389 + 8644 10267 0 2 1046,514, 0,1109, +,+, 606563 Satellite W-chromosome 585 chrUn_NT_464614v1 16104 17153 GGXHOI 387 + 16104 17153 0 2 470,516, 0,533, +,+, 606571 Satellite W-chromosome 585 chrUn_NT_464615v1 741 1176 GGXHOI 408 - 741 1176 0 2 271,148, 0,287, -,-, 606582 Satellite W-chromosome 585 chrUn_NT_464615v1 1276 4549 GGXHOI 368 - 1276 4549 0 5 431,966,145,640,979, 0,494,1477,1639,2294, -,-,-,-,-, 606583 Satellite W-chromosome 585 chrUn_NT_464615v1 4689 6478 GGXHOI 388 - 4689 6478 0 4 147,146,431,968, 0,164,327,821, -,-,-,-, 606584 Satellite W-chromosome 585 chrUn_NT_464615v1 6659 8652 GGXHOI 396 - 6659 8652 0 4 352,146,969,435, 0,369,532,1558, -,-,-,-, 606585 Satellite W-chromosome 585 chrUn_NT_464615v1 8833 10822 GGXHOI 409 - 8833 10822 0 4 188,147,1128,434, 0,205,369,1555, -,-,-,-, 606586 Satellite W-chromosome 585 chrUn_NT_464615v1 11003 13569 GGXHOI 387 - 11003 13569 0 3 352,1088,1089, 0,369,1477, -,-,-, 606587 Satellite W-chromosome 585 chrUn_NT_464615v1 13709 14805 GGXHOI 394 - 13709 14805 0 2 147,932, 0,164, -,-, 606588 Satellite W-chromosome 585 chrUn_NT_464615v1 16509 17889 GGXHOI 390 - 16509 17889 0 2 147,1216, 0,164, -,-, 606591 Satellite W-chromosome 585 chrUn_NT_464615v1 18769 19731 GGXHOI 383 - 18769 19731 0 2 352,593, 0,369, -,-, 606593 Satellite W-chromosome 585 chrUn_NT_464615v1 21133 21732 GGXHOI 366 - 21133 21732 0 2 312,270, 0,329, -,-, 606597 Satellite W-chromosome 585 chrUn_NT_464615v1 21873 22105 GGXHOI 423 - 21873 22105 0 2 65,151, 0,81, -,-, 606598 Satellite W-chromosome 585 chrUn_NT_464615v1 22204 23553 GGXHOI 357 - 22204 23553 0 2 972,341, 0,1008, -,-, 606599 Satellite W-chromosome 585 chrUn_NT_464616v1 3167 5609 GGXHOI 393 - 3167 5609 0 5 805,133,148,997,239, 0,826,974,1164,2203, -,-,-,-,-, 606602 Satellite W-chromosome 585 chrUn_NT_464616v1 6920 14534 GGXHOI 389 - 6920 14534 0 3 2453,552,4579, 0,2467,3035, -,-,-, 606605 Satellite W-chromosome 585 chrUn_NT_464616v1 15416 16444 GGXHOI 322 - 15416 16444 0 2 126,891, 0,137, -,-, 606608 Satellite W-chromosome 585 chrUn_NT_464616v1 16725 17943 GGXHOI 355 - 16725 17943 0 2 145,1058, 0,160, -,-, 606610 Satellite W-chromosome 585 chrUn_NT_464616v1 18691 20274 GGXHOI 351 - 18691 20274 0 3 615,781,146, 0,636,1437, -,-,-, 606612 Satellite W-chromosome 585 chrUn_NT_464616v1 20351 24159 GGXHOI 379 - 20351 24159 0 4 754,539,657,1763, 0,815,1370,2045, -,-,-,-, 606613 Satellite W-chromosome 585 chrUn_NT_464618v1 16657 17318 GGLTR3F1 747 - 16657 17318 0 2 157,502, 0,159, -,-, 606642 LTR ERVL 585 chrUn_NT_464619v1 782 3421 CR1-D 634 - 782 3421 0 2 1631,1008, 0,1631, -,-, 606652 LINE CR1 585 chrUn_NT_464619v1 4203 4449 Char12Mar1_GG 511 - 4203 4449 0 2 72,174, 0,72, -,-, 606654 DNA hAT-Charlie 585 chrUn_NT_464620v1 6273 8150 GGXHOI 560 + 6273 8150 0 2 1495,371, 0,1506, +,+, 606671 Satellite W-chromosome 585 chrUn_NT_464620v1 11546 16504 GGXHOI 470 + 11546 16504 0 6 588,226,1741,230,379,1453, 0,812,1061,2836,3109,3505, +,+,+,+,+,+, 606673 Satellite W-chromosome 585 chrUn_NT_464620v1 21773 23276 GGXHOI 431 + 21773 23276 0 3 134,295,1016, 0,169,487, +,+,+, 606678 Satellite W-chromosome 585 chrUn_NT_464621v1 14088 15357 CR1-H 581 + 14088 15357 0 2 1156,113, 0,1156, +,+, 606681 LINE CR1 585 chrUn_NT_464621v1 17366 17989 CR1-H 661 + 17366 17989 0 2 478,139, 0,484, +,+, 606684 LINE CR1 585 chrUn_NT_464622v1 1001 2676 GGXHOI 363 - 1001 2676 0 3 306,316,980, 0,320,695, -,-,-, 606691 Satellite W-chromosome 585 chrUn_NT_464622v1 2771 4965 GGXHOI 356 - 2771 4965 0 2 2022,156, 0,2038, -,-, 606692 Satellite W-chromosome 585 chrUn_NT_464622v1 5203 8257 GGXHOI 384 - 5203 8257 0 2 885,2154, 0,900, -,-, 606693 Satellite W-chromosome 585 chrUn_NT_464622v1 8340 9432 GGXHOI 340 - 8340 9432 0 2 323,744, 0,348, -,-, 606694 Satellite W-chromosome 585 chrUn_NT_464622v1 14842 18016 GGXHOI 387 - 14842 18016 0 2 275,2841, 0,333, -,-, 606699 Satellite W-chromosome 585 chrUn_NT_464622v1 21623 24115 GGXHOI 395 - 21623 24115 0 3 1343,746,327, 0,1378,2165, -,-,-, 606703 Satellite W-chromosome 585 chrUn_NT_464623v1 3241 9352 GGXHOI 396 - 3241 9352 0 6 498,1979,977,970,975,617, 0,514,2512,3509,4499,5494, -,-,-,-,-,-, 606705 Satellite W-chromosome 585 chrUn_NT_464623v1 9541 14283 GGXHOI 368 - 9541 14283 0 2 3887,835, 0,3907, -,-, 606706 Satellite W-chromosome 585 chrUn_NT_464623v1 14564 22582 GGXHOI 389 - 14564 22582 0 6 764,969,966,2917,976,1327, 0,784,1773,2759,5695,6691, -,-,-,-,-,-, 606707 Satellite W-chromosome 585 chrUn_NT_464623v1 22766 24113 GGXHOI 365 - 22766 24113 0 3 451,314,513, 0,469,834, -,-,-, 606708 Satellite W-chromosome 585 chrUn_NT_464624v1 318 1799 GGLTR7B 546 + 318 1799 0 2 903,126, 0,1355, +,+, 606710 LTR ERV1 585 chrUn_NT_464624v1 3935 6082 CR1-C 863 + 3935 6082 0 2 1540,607, 0,1540, +,+, 606714 LINE CR1 585 chrUn_NT_464624v1 21039 21453 CR1-H 757 - 21039 21453 0 2 318,84, 0,330, -,-, 606723 LINE CR1 585 chrUn_NT_464625v1 5845 8960 GGLTR7-int 417 + 5845 8960 0 4 116,1631,949,277, 0,116,1842,2838, +,+,+,+, 606736 LTR ERV1 585 chrUn_NT_464626v1 3147 3521 GGXHOI 388 - 3147 3521 0 2 143,190, 0,184, -,-, 606755 Satellite W-chromosome 585 chrUn_NT_464626v1 10464 12106 GGXHOI 369 - 10464 12106 0 2 511,1115, 0,527, -,-, 606764 Satellite W-chromosome 585 chrUn_NT_464626v1 15037 16022 GGXHOI 331 - 15037 16022 0 2 523,399, 0,586, -,-, 606769 Satellite W-chromosome 585 chrUn_NT_464627v1 12993 14277 GGXHOI 605 - 12993 14277 0 2 1086,156, 0,1128, -,-, 606794 Satellite W-chromosome 585 chrUn_NT_464627v1 15003 18260 GGXHOI 564 - 15003 18260 0 4 406,281,148,1038, 0,1100,1392,2219, -,-,-,-, 606796 Satellite W-chromosome 585 chrUn_NT_464627v1 18300 21931 GGXHOI 560 - 18300 21931 0 6 340,212,143,439,74,695, 0,1129,1399,1752,2846,2936, -,-,-,-,-,-, 606800 Satellite W-chromosome 585 chrUn_NT_464627v1 21943 24063 GGXHOI 538 - 21943 24063 0 3 771,420,127, 0,1025,1993, -,-,-, 606805 Satellite W-chromosome 585 chrUn_NT_464628v1 3947 5520 GGXHOI 382 - 3947 5520 0 2 514,997, 0,576, -,-, 606814 Satellite W-chromosome 585 chrUn_NT_464628v1 12602 13651 GGXHOI 375 - 12602 13651 0 2 514,472, 0,577, -,-, 606825 Satellite W-chromosome 585 chrUn_NT_464628v1 16050 17101 GGXHOI 378 - 16050 17101 0 2 516,472, 0,579, -,-, 606829 Satellite W-chromosome 585 chrUn_NT_464628v1 23303 23828 GGXHOI 356 - 23303 23828 0 2 254,256, 0,269, -,-, 606839 Satellite W-chromosome 585 chrUn_NT_464629v1 1311 1836 (CCCCATTGGG)n 508 - 1311 1836 0 2 383,128, 0,397, -,-, 606842 Satellite Satellite 585 chrUn_NT_464629v1 3681 4725 (ACCCCATAGGG)n 641 + 3681 4725 0 3 256,234,123, 0,634,921, +,+,+, 606843 Satellite Satellite 585 chrUn_NT_464629v1 3937 4315 (ACCCATAGGG)n 592 + 3937 4315 0 2 184,42, 0,336, +,+, 606844 Satellite Satellite 585 chrUn_NT_464631v1 1297 2357 CR1-B2 617 - 1297 2357 0 2 835,222, 0,838, -,-, 606907 LINE CR1 585 chrUn_NT_464631v1 7821 8070 CR1-X 515 + 7821 8070 0 2 171,78, 0,171, +,+, 606910 LINE CR1 585 chrUn_NT_464631v1 9392 9542 GGERVL-C-int 464 + 9392 9542 0 2 70,80, 0,70, +,+, 606911 LTR ERVL 585 chrUn_NT_464631v1 11764 12885 CR1-B2 692 + 11764 12885 0 2 225,893, 0,228, +,+, 606914 LINE CR1 585 chrUn_NT_464631v1 20570 21788 CR1-X 475 + 20570 21788 0 4 88,171,78,50, 0,909,1080,1168, +,+,+,+, 606922 LINE CR1 585 chrUn_NT_464632v1 5348 8461 GGLTR7-int 416 + 5348 8461 0 4 117,1627,949,278, 0,117,1839,2835, +,+,+,+, 606931 LTR ERV1 585 chrUn_NT_464634v1 1573 10203 GGXHOI 415 - 1573 10203 0 8 216,257,2610,665,890,454,2790,569, 0,229,497,3150,3841,4759,5254,8061, -,-,-,-,-,-,-,-, 606958 Satellite W-chromosome 585 chrUn_NT_464634v1 12910 22059 GGXHOI 425 - 12910 22059 0 5 1196,687,2230,3932,1012, 0,1213,1912,4161,8137, -,-,-,-,-, 606960 Satellite W-chromosome 585 chrUn_NT_464634v1 22160 23994 GGXHOI 467 - 22160 23994 0 3 538,962,228, 0,583,1606, -,-,-, 606961 Satellite W-chromosome 585 chrUn_NT_464636v1 9695 11448 GGXHOI 375 - 9695 11448 0 2 1003,688, 0,1065, -,-, 606979 Satellite W-chromosome 585 chrUn_NT_464636v1 11624 15096 GGXHOI 399 - 11624 15096 0 4 1889,1049,183,298, 0,1907,2968,3174, -,-,-,-, 606980 Satellite W-chromosome 585 chrUn_NT_464636v1 15184 17029 GGXHOI 399 - 15184 17029 0 3 677,947,191, 0,690,1654, -,-,-, 606981 Satellite W-chromosome 585 chrUn_NT_464636v1 17216 23991 GGXHOI 391 - 17216 23991 0 8 144,987,153,488,1210,183,1817,1642, 0,170,1180,1369,1872,3100,3300,5133, -,-,-,-,-,-,-,-, 606982 Satellite W-chromosome 585 chrUn_NT_464637v1 5656 6243 Sat-CR1_GG 152 - 5656 6243 0 2 178,242, 0,345, -,-, 607000 Satellite Satellite 585 chrUn_NT_464637v1 7092 7674 Sat-CR1_GG 118 - 7092 7674 0 2 176,183, 0,399, -,-, 607006 Satellite Satellite 585 chrUn_NT_464637v1 9975 10564 Sat-CR1_GG 174 - 9975 10564 0 2 180,243, 0,346, -,-, 607014 Satellite Satellite 585 chrUn_NT_464637v1 12869 13450 Sat-CR1_GG 134 - 12869 13450 0 2 175,241, 0,340, -,-, 607022 Satellite Satellite 585 chrUn_NT_464637v1 14302 14887 Sat-CR1_GG 164 - 14302 14887 0 2 177,241, 0,344, -,-, 607026 Satellite Satellite 585 chrUn_NT_464637v1 20000 20524 Sat-CR1_GG 174 - 20000 20524 0 2 122,162, 0,362, -,-, 607046 Satellite Satellite 585 chrUn_NT_464638v1 1348 6235 GGLTR7-int 556 - 1348 6235 0 5 554,95,374,2782,190, 0,554,649,1903,4697, -,-,-,-,-, 607064 LTR ERV1 585 chrUn_NT_464638v1 7019 10834 GGERV28_I-int 249 - 7019 10834 0 3 1995,297,64, 0,2684,3751, -,-,-, 607067 LTR ERVK 585 chrUn_NT_464638v1 11742 12501 GGLTR11-int 330 - 11742 12501 0 2 67,70, 0,689, -,-, 607068 LTR ERV1 585 chrUn_NT_464638v1 14570 20625 GGLTR3F2 746 - 14570 20625 0 5 203,231,4277,835,457, 0,253,484,4761,5598, -,-,-,-,-, 607069 LTR ERVL 585 chrUn_NT_464639v1 6466 7201 (GCCCCACAGCT)n 487 + 6466 7201 0 2 561,139, 0,596, +,+, 607077 Satellite Satellite 585 chrUn_NT_464639v1 7859 8310 (GCCCCACAGCT)n 506 + 7859 8310 0 2 292,139, 0,312, +,+, 607080 Satellite Satellite 585 chrUn_NT_464639v1 11653 12204 (CTCTATGGGG)n 710 + 11653 12204 0 2 80,348, 0,203, +,+, 607092 Satellite Satellite 585 chrUn_NT_464639v1 12998 13405 (CTCTATGGGG)n 546 + 12998 13405 0 3 99,29,22, 0,222,385, +,+,+, 607101 Satellite Satellite 585 chrUn_NT_464639v1 13855 14117 (CTCTATGGGG)n 438 + 13855 14117 0 2 118,116, 0,146, +,+, 607104 Satellite Satellite 585 chrUn_NT_464641v1 4470 5136 ENS1-int 347 + 4470 5136 0 2 130,104, 0,562, +,+, 607180 LTR ERVL 585 chrUn_NT_464641v1 20364 21019 ENS1-int 340 + 20364 21019 0 2 130,201, 0,454, +,+, 607192 LTR ERVL 585 chrUn_NT_464642v1 999 8204 CR1-F 564 + 999 8204 0 26 177,190,200,203,204,204,180,160,191,200,203,203,204,156,201,176,140,190,85,169,154,161,163,200,204,180, 0,222,454,953,1198,1444,1690,1914,2119,2352,2851,3096,3341,3811,4257,4733,4953,5366,5583,5758,5979,6173,6361,6538,6780,7025, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 607195 LINE CR1 585 chrUn_NT_464642v1 8248 8641 CR1-F 642 + 8248 8641 0 2 157,191, 0,202, +,+, 607203 LINE CR1 585 chrUn_NT_464642v1 8683 12591 CR1-F 501 + 8683 12591 0 11 200,203,203,204,154,198,186,133,193,208,181, 0,500,745,990,1460,1897,2140,2884,3242,3477,3727, +,+,+,+,+,+,+,+,+,+,+, 607204 LINE CR1 585 chrUn_NT_464642v1 12636 13060 CR1-F 689 + 12636 13060 0 2 180,196, 0,228, +,+, 607208 LINE CR1 585 chrUn_NT_464642v1 13102 15678 CR1-F 510 + 13102 15678 0 7 201,194,208,209,155,199,181, 0,500,734,987,1474,1919,2395, +,+,+,+,+,+,+, 607209 LINE CR1 585 chrUn_NT_464642v1 16401 18033 CR1-F 500 + 16401 18033 0 6 206,197,188,191,192,216, 0,246,485,948,1180,1416, +,+,+,+,+,+, 607217 LINE CR1 585 chrUn_NT_464642v1 18328 20522 CR1-F 473 + 18328 20522 0 6 214,211,153,173,180,179, 0,259,739,1178,1570,2015, +,+,+,+,+,+, 607220 LINE CR1 585 chrUn_NT_464642v1 20566 21031 CR1-F 536 + 20566 21031 0 2 96,210, 0,255, +,+, 607225 LINE CR1 585 chrUn_NT_464642v1 21074 23580 CR1-F 573 + 21074 23580 0 8 211,189,179,155,197,180,172,188, 0,255,738,961,1405,1877,2101,2318, +,+,+,+,+,+,+,+, 607226 LINE CR1 585 chrUn_NT_464642v1 23621 23952 CR1-F 557 + 23621 23952 0 2 204,85, 0,246, +,+, 607230 LINE CR1 585 chrUn_NT_464643v1 4275 8630 CR1-D2 525 + 4275 8630 0 2 414,325, 0,4030, +,+, 607233 LINE CR1 585 chrUn_NT_464643v1 15389 16002 GGERV28_I-int 375 + 15389 16002 0 2 88,82, 0,531, +,+, 607237 LTR ERVK 585 chrUn_NT_464644v1 13957 14548 GGLTR11 681 + 13957 14548 0 2 267,248, 0,343, +,+, 607255 LTR ERV1 585 chrUn_NT_464646v1 8910 9315 (TTAGGG)n 570 + 8910 9315 0 2 171,178, 0,227, +,+, 607278 Simple_repeat Simple_repeat 585 chrUn_NT_464647v1 5098 6412 GGXHOI 394 - 5098 6412 0 4 154,604,328,151, 0,194,811,1163, -,-,-,-, 607287 Satellite W-chromosome 585 chrUn_NT_464647v1 6569 9073 GGXHOI 409 - 6569 9073 0 5 143,973,318,599,348, 0,154,1182,1544,2156, -,-,-,-,-, 607288 Satellite W-chromosome 585 chrUn_NT_464647v1 10751 11831 GGXHOI 428 - 10751 11831 0 2 958,102, 0,978, -,-, 607290 Satellite W-chromosome 585 chrUn_NT_464647v1 11857 12299 GGXHOI 367 + 11857 12299 0 2 158,264, 0,178, +,+, 607291 Satellite W-chromosome 585 chrUn_NT_464647v1 12740 19856 GGXHOI 433 + 12740 19856 0 8 432,981,519,1056,1508,1429,519,563, 0,445,1441,1973,3049,4577,6021,6553, +,+,+,+,+,+,+,+, 607293 Satellite W-chromosome 585 chrUn_NT_464647v1 19944 21680 GGXHOI 431 + 19944 21680 0 3 331,64,1306, 0,346,430, +,+,+, 607294 Satellite W-chromosome 585 chrUn_NT_464647v1 22202 23872 GGXHOI 374 + 22202 23872 0 4 874,90,433,215, 0,899,1009,1455, +,+,+,+, 607296 Satellite W-chromosome 585 chrUn_NT_464649v1 17160 18066 CR1-C2 818 + 17160 18066 0 2 174,505, 0,401, +,+, 607348 LINE CR1 585 chrUn_NT_464650v1 644 3780 GGLTR10D 953 - 644 3780 0 3 347,2668,118, 0,350,3018, -,-,-, 607353 LTR ERVK 585 chrUn_NT_464650v1 4088 5776 CR1-C 823 - 4088 5776 0 2 660,221, 0,1467, -,-, 607354 LINE CR1 585 chrUn_NT_464650v1 7267 9696 GGERV10_LTR 723 - 7267 9696 0 3 156,62,2111, 0,256,318, -,-,-, 607358 LTR ERVL 585 chrUn_NT_464650v1 9698 9965 GGERV10_LTR 595 - 9698 9965 0 2 96,69, 0,198, -,-, 607359 LTR ERVL 585 chrUn_NT_464650v1 13092 14576 GGERVL-A-int 494 + 13092 14576 0 2 805,394, 0,1090, +,+, 607363 LTR ERVL 585 chrUn_NT_464650v1 18520 22897 GGLTR3A 868 - 18520 22897 0 2 527,3850, 0,527, -,-, 607369 LTR ERVL 585 chrUn_NT_464651v1 5530 7689 CR1-C 869 - 5530 7689 0 2 613,1546, 0,613, -,-, 607376 LINE CR1 585 chrUn_NT_464651v1 9877 11374 GGLTR7B 585 - 9877 11374 0 2 114,890, 0,607, -,-, 607379 LTR ERV1 585 chrUn_NT_464652v1 1150 2599 GGXHOI 359 + 1150 2599 0 3 471,470,389, 0,533,1060, +,+,+, 607403 Satellite W-chromosome 585 chrUn_NT_464652v1 5524 6575 GGXHOI 392 + 5524 6575 0 2 472,516, 0,535, +,+, 607408 Satellite W-chromosome 585 chrUn_NT_464652v1 6674 7725 GGXHOI 392 + 6674 7725 0 2 472,516, 0,535, +,+, 607409 Satellite W-chromosome 585 chrUn_NT_464652v1 7824 8875 GGXHOI 392 + 7824 8875 0 2 472,516, 0,535, +,+, 607410 Satellite W-chromosome 585 chrUn_NT_464652v1 8974 10025 GGXHOI 392 + 8974 10025 0 2 472,516, 0,535, +,+, 607411 Satellite W-chromosome 585 chrUn_NT_464652v1 10124 11175 GGXHOI 392 + 10124 11175 0 2 472,516, 0,535, +,+, 607412 Satellite W-chromosome 585 chrUn_NT_464652v1 11274 12325 GGXHOI 392 + 11274 12325 0 2 472,516, 0,535, +,+, 607413 Satellite W-chromosome 585 chrUn_NT_464652v1 12424 13475 GGXHOI 392 + 12424 13475 0 2 472,516, 0,535, +,+, 607414 Satellite W-chromosome 585 chrUn_NT_464652v1 13574 14625 GGXHOI 392 + 13574 14625 0 2 472,516, 0,535, +,+, 607415 Satellite W-chromosome 585 chrUn_NT_464652v1 18110 19161 GGXHOI 392 + 18110 19161 0 2 472,516, 0,535, +,+, 607420 Satellite W-chromosome 585 chrUn_NT_464652v1 22708 23709 GGXHOI 380 + 22708 23709 0 2 472,468, 0,533, +,+, 607425 Satellite W-chromosome 585 chrUn_NT_464653v1 7517 8279 (GGATAT)n 334 + 7517 8279 0 2 334,336, 0,426, +,+, 607436 Simple_repeat Simple_repeat 585 chrUn_NT_464653v1 10920 13393 GGLTR7-int 596 + 10920 13393 0 3 331,859,788, 0,818,1685, +,+,+, 607439 LTR ERV1 585 chrUn_NT_464653v1 13574 15776 GGLTR10D-int 901 - 13574 15776 0 2 365,1834, 0,368, -,-, 607441 LTR ERVK 585 chrUn_NT_464653v1 15815 16191 (CGAGG)n 534 + 15815 16191 0 2 180,183, 0,193, +,+, 607443 Simple_repeat Simple_repeat 585 chrUn_NT_464653v1 17871 19009 (CGAGG)n 530 + 17871 19009 0 4 181,178,453,184, 0,224,461,954, +,+,+,+, 607448 Simple_repeat Simple_repeat 585 chrUn_NT_464653v1 19095 20158 (CGAGG)n 496 + 19095 20158 0 4 150,182,325,174, 0,329,525,889, +,+,+,+, 607450 Simple_repeat Simple_repeat 585 chrUn_NT_464653v1 20316 20919 (CGAGG)n 524 + 20316 20919 0 2 181,367, 0,236, +,+, 607453 Simple_repeat Simple_repeat 585 chrUn_NT_464654v1 12226 13367 CR1-D 735 + 12226 13367 0 2 328,793, 0,348, +,+, 607469 LINE CR1 585 chrUn_NT_464655v1 2719 23737 GGXHOI 417 - 2719 23737 0 4 1785,3475,3729,11932, 0,1804,5297,9086, -,-,-,-, 607474 Satellite W-chromosome 585 chrUn_NT_464656v1 215 1552 (CGAGG)n 513 + 215 1552 0 3 350,618,172, 0,374,1165, +,+,+, 607476 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 1736 2469 (CGAGG)n 507 + 1736 2469 0 2 173,533, 0,200, +,+, 607479 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 2513 3136 (CGAGG)n 555 + 2513 3136 0 2 394,177, 0,446, +,+, 607481 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 4445 4926 (CGAGG)n 577 + 4445 4926 0 2 179,281, 0,200, +,+, 607490 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 6893 8925 (CGAGG)n 526 + 6893 8925 0 6 561,182,178,666,183,180, 0,578,780,973,1653,1852, +,+,+,+,+,+, 607499 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 10400 11159 (CGAGG)n 482 + 10400 11159 0 2 330,253, 0,506, +,+, 607508 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 11324 12109 (CGAGG)n 525 + 11324 12109 0 3 183,178,351, 0,198,434, +,+,+, 607511 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 12135 12990 (CGAGG)n 538 + 12135 12990 0 2 616,179, 0,676, +,+, 607513 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 14365 14851 (CGAGG)n 550 + 14365 14851 0 2 110,193, 0,293, +,+, 607519 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 15253 16604 (CGAGG)n 531 + 15253 16604 0 3 731,221,186, 0,909,1165, +,+,+, 607523 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 17410 18896 (CGAGG)n 513 + 17410 18896 0 2 181,1271, 0,215, +,+, 607530 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 19228 20587 (CGAGG)n 512 + 19228 20587 0 2 94,1086, 0,273, +,+, 607533 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 22109 22439 (CGAGG)n 503 + 22109 22439 0 2 140,177, 0,153, +,+, 607541 Simple_repeat Simple_repeat 585 chrUn_NT_464656v1 22481 22893 (CGAGG)n 514 + 22481 22893 0 2 176,177, 0,235, +,+, 607543 Simple_repeat Simple_repeat 585 chrUn_NT_464658v1 711 1682 GGXHOI 425 - 711 1682 0 2 226,728, 0,243, -,-, 607586 Satellite W-chromosome 585 chrUn_NT_464658v1 1804 3502 GGXHOI 383 - 1804 3502 0 2 789,892, 0,806, -,-, 607587 Satellite W-chromosome 585 chrUn_NT_464658v1 8543 11603 GGXHOI 404 - 8543 11603 0 2 2420,592, 0,2468, -,-, 607589 Satellite W-chromosome 585 chrUn_NT_464658v1 11984 15242 GGXHOI 389 - 11984 15242 0 2 973,2263, 0,995, -,-, 607591 Satellite W-chromosome 585 chrUn_NT_464658v1 15357 20128 GGXHOI 428 - 15357 20128 0 2 3884,871, 0,3900, -,-, 607592 Satellite W-chromosome 585 chrUn_NT_464658v1 20272 23694 GGXHOI 336 - 20272 23694 0 3 2038,1033,275, 0,2090,3147, -,-,-, 607593 Satellite W-chromosome 585 chrUn_NT_464659v1 17592 20712 GGLTR7-int 416 + 17592 20712 0 4 116,1631,954,277, 0,116,1842,2843, +,+,+,+, 607607 LTR ERV1 585 chrUn_NT_464660v1 1538 4229 GGXHOI 366 - 1538 4229 0 6 432,796,405,302,266,345, 0,448,1300,1717,2040,2346, -,-,-,-,-,-, 607613 Satellite W-chromosome 585 chrUn_NT_464660v1 4326 5492 GGXHOI 375 - 4326 5492 0 2 354,793, 0,373, -,-, 607614 Satellite W-chromosome 585 chrUn_NT_464660v1 5581 5856 GGXHOI 388 - 5581 5856 0 2 127,133, 0,142, -,-, 607615 Satellite W-chromosome 585 chrUn_NT_464660v1 5941 8268 GGXHOI 357 - 5941 8268 0 3 625,289,1379, 0,641,948, -,-,-, 607616 Satellite W-chromosome 585 chrUn_NT_464660v1 9672 18705 GGXHOI 385 - 9672 18705 0 6 374,758,4966,1207,263,1372, 0,392,1173,6150,7380,7661, -,-,-,-,-,-, 607619 Satellite W-chromosome 585 chrUn_NT_464660v1 18804 23504 GGXHOI 366 - 18804 23504 0 9 265,1748,880,275,257,393,143,317,234, 0,283,2049,2947,3238,3515,3929,4088,4466, -,-,-,-,-,-,-,-,-, 607620 Satellite W-chromosome 585 chrUn_NT_464661v1 4550 5211 GGLTR11-int 419 + 4550 5211 0 2 125,314, 0,347, +,+, 607629 LTR ERV1 585 chrUn_NT_464662v1 2696 9406 Z-REP 884 + 2696 9406 0 2 951,5748, 0,962, +,+, 607645 Satellite macro 585 chrUn_NT_464663v1 2272 4818 GGXHOI 413 + 2272 4818 0 2 1884,647, 0,1899, +,+, 607656 Satellite W-chromosome 585 chrUn_NT_464663v1 4903 5898 GGXHOI 423 + 4903 5898 0 3 338,146,487, 0,349,508, +,+,+, 607657 Satellite W-chromosome 585 chrUn_NT_464663v1 7735 8691 GGXHOI 422 + 7735 8691 0 3 338,146,448, 0,349,508, +,+,+, 607659 Satellite W-chromosome 585 chrUn_NT_464663v1 10371 12948 GGXHOI 423 + 10371 12948 0 3 338,146,2069, 0,349,508, +,+,+, 607661 Satellite W-chromosome 585 chrUn_NT_464663v1 13033 15620 GGXHOI 403 + 13033 15620 0 3 338,648,1538, 0,349,1049, +,+,+, 607662 Satellite W-chromosome 585 chrUn_NT_464663v1 15705 18282 GGXHOI 421 + 15705 18282 0 3 338,146,2069, 0,349,508, +,+,+, 607663 Satellite W-chromosome 585 chrUn_NT_464663v1 18367 21988 GGXHOI 417 + 18367 21988 0 5 338,146,907,644,1534, 0,349,508,1430,2087, +,+,+,+,+, 607664 Satellite W-chromosome 585 chrUn_NT_464663v1 22072 23020 GGXHOI 400 + 22072 23020 0 2 410,519, 0,429, +,+, 607665 Satellite W-chromosome 585 chrUn_NT_464664v1 2913 4570 GGXHOI 408 - 2913 4570 0 2 143,1500, 0,157, -,-, 607669 Satellite W-chromosome 585 chrUn_NT_464664v1 5349 11256 GGXHOI 412 - 5349 11256 0 6 411,1075,1020,1879,433,991, 0,446,1536,2571,4463,4916, -,-,-,-,-,-, 607672 Satellite W-chromosome 585 chrUn_NT_464664v1 13340 15253 GGXHOI 388 - 13340 15253 0 2 515,1378, 0,535, -,-, 607676 Satellite W-chromosome 585 chrUn_NT_464664v1 15357 16280 GGXHOI 329 - 15357 16280 0 2 400,490, 0,433, -,-, 607677 Satellite W-chromosome 585 chrUn_NT_464664v1 16344 18894 GGXHOI 404 - 16344 18894 0 2 1207,1329, 0,1221, -,-, 607678 Satellite W-chromosome 585 chrUn_NT_464664v1 18959 23067 GGXHOI 404 - 18959 23067 0 5 199,940,433,2101,330, 0,256,1209,1662,3778, -,-,-,-,-, 607679 Satellite W-chromosome 585 chrUn_NT_464666v1 1721 2344 GGXHOI 372 + 1721 2344 0 2 256,350, 0,273, +,+, 607695 Satellite W-chromosome 585 chrUn_NT_464666v1 2526 5581 GGXHOI 371 + 2526 5581 0 4 350,1212,1009,388, 0,413,1641,2667, +,+,+,+, 607696 Satellite W-chromosome 585 chrUn_NT_464666v1 5808 7136 GGXHOI 341 + 5808 7136 0 3 554,388,305, 0,573,1023, +,+,+, 607697 Satellite W-chromosome 585 chrUn_NT_464666v1 8632 11433 GGXHOI 384 + 8632 11433 0 2 835,1945, 0,856, +,+, 607699 Satellite W-chromosome 585 chrUn_NT_464666v1 13461 16229 GGXHOI 379 + 13461 16229 0 2 1738,1009, 0,1759, +,+, 607702 Satellite W-chromosome 585 chrUn_NT_464666v1 18288 19582 GGXHOI 345 + 18288 19582 0 3 554,388,271, 0,573,1023, +,+,+, 607705 Satellite W-chromosome 585 chrUn_NT_464666v1 19720 23107 GGXHOI 357 + 19720 23107 0 2 824,2543, 0,844, +,+, 607706 Satellite W-chromosome 585 chrUn_NT_464667v1 42 6008 GGXHOI 501 - 42 6008 0 6 2372,680,88,387,116,921, 0,2431,3538,3688,4125,5045, -,-,-,-,-,-, 607709 Satellite W-chromosome 585 chrUn_NT_464667v1 6057 8708 GGXHOI 564 - 6057 8708 0 3 155,304,731, 0,1056,1920, -,-,-, 607713 Satellite W-chromosome 585 chrUn_NT_464667v1 8725 12234 GGXHOI 502 - 8725 12234 0 5 291,11,376,269,1557, 0,602,1060,1644,1952, -,-,-,-,-, 607717 Satellite W-chromosome 585 chrUn_NT_464667v1 12245 14649 GGXHOI 542 - 12245 14649 0 3 728,22,568, 0,1068,1836, -,-,-, 607722 Satellite W-chromosome 585 chrUn_NT_464667v1 14713 17967 GGXHOI 537 - 14713 17967 0 5 725,95,250,134,765, 0,744,1144,1956,2489, -,-,-,-,-, 607726 Satellite W-chromosome 585 chrUn_NT_464667v1 17675 19000 Sat-CR1_GG 180 - 17675 19000 0 2 304,479, 0,846, -,-, 607730 Satellite Satellite 585 chrUn_NT_464667v1 18564 21248 GGXHOI 518 - 18564 21248 0 3 516,91,1132, 0,1216,1552, -,-,-, 607732 Satellite W-chromosome 585 chrUn_NT_464668v1 230 463 (ACCCCATAGGG)n 566 + 230 463 0 2 57,58, 0,175, +,+, 607740 Satellite Satellite 585 chrUn_NT_464668v1 2754 3044 (ACCCCATAGGG)n 519 - 2754 3044 0 2 134,156, 0,134, -,-, 607749 Satellite Satellite 585 chrUn_NT_464668v1 4804 5152 (ACCCCATAGGG)n 551 - 4804 5152 0 2 158,175, 0,173, -,-, 607759 Satellite Satellite 585 chrUn_NT_464668v1 6445 6667 (GCCCCACAGCT)n 248 + 6445 6667 0 2 67,39, 0,183, +,+, 607768 Satellite Satellite 585 chrUn_NT_464668v1 6685 6808 (ACCCCATAGGG)n 492 - 6685 6808 0 2 13,17, 0,106, -,-, 607770 Satellite Satellite 585 chrUn_NT_464668v1 7920 8129 (TATGGGGTCA)n 825 + 7920 8129 0 2 47,108, 0,101, +,+, 607774 Simple_repeat Simple_repeat 585 chrUn_NT_464668v1 12591 12900 (ACCCATAGAG)n 725 + 12591 12900 0 2 158,137, 0,172, +,+, 607786 Satellite Satellite 585 chrUn_NT_464668v1 13075 13564 (CTCTATGGGG)n 661 + 13075 13564 0 3 40,29,261, 0,158,228, +,+,+, 607789 Satellite Satellite 585 chrUn_NT_464668v1 16583 17941 (CTCTATGGGG)n 657 + 16583 17941 0 7 123,123,121,121,123,244,361, 0,156,304,438,603,740,997, +,+,+,+,+,+,+, 607800 Satellite Satellite 585 chrUn_NT_464668v1 18236 19948 (CTCTATGGGG)n 620 + 18236 19948 0 4 954,41,325,235, 0,1075,1141,1477, +,+,+,+, 607802 Satellite Satellite 585 chrUn_NT_464669v1 8141 9192 GGXHOI 387 + 8141 9192 0 2 472,516, 0,535, +,+, 607814 Satellite W-chromosome 585 chrUn_NT_464669v1 9291 10342 GGXHOI 387 + 9291 10342 0 2 472,516, 0,535, +,+, 607815 Satellite W-chromosome 585 chrUn_NT_464669v1 12739 13790 GGXHOI 387 + 12739 13790 0 2 472,516, 0,535, +,+, 607819 Satellite W-chromosome 585 chrUn_NT_464669v1 18213 18675 (CAAGG)n 492 + 18213 18675 0 2 226,200, 0,262, +,+, 607828 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 18846 19505 (CCTTG)n 498 + 18846 19505 0 2 377,254, 0,405, +,+, 607830 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 19585 19936 (CCTTG)n 470 + 19585 19936 0 2 181,148, 0,203, +,+, 607832 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 20406 21265 (CAAGG)n 484 + 20406 21265 0 3 192,384,227, 0,224,632, +,+,+, 607835 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 21378 21638 (CCTTG)n 498 + 21378 21638 0 2 178,24, 0,236, +,+, 607837 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 21691 22050 (CCTTG)n 496 + 21691 22050 0 2 156,184, 0,175, +,+, 607839 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 22153 22517 (CCTTG)n 428 + 22153 22517 0 2 262,75, 0,289, +,+, 607841 Simple_repeat Simple_repeat 585 chrUn_NT_464669v1 22702 23157 (CCTTG)n 463 + 22702 23157 0 2 189,251, 0,204, +,+, 607843 Simple_repeat Simple_repeat 585 chrUn_NT_464670v1 399 4797 GGXHOI 550 - 399 4797 0 2 3208,1178, 0,3220, -,-, 607846 Satellite W-chromosome 585 chrUn_NT_464670v1 5951 7005 GGXHOI 553 - 5951 7005 0 3 289,452,103, 0,302,951, -,-,-, 607848 Satellite W-chromosome 585 chrUn_NT_464670v1 7085 11655 GGXHOI 500 - 7085 11655 0 4 477,1324,248,2368, 0,528,1899,2202, -,-,-,-, 607850 Satellite W-chromosome 585 chrUn_NT_464670v1 11966 13556 GGXHOI 563 - 11966 13556 0 3 247,714,391, 0,297,1199, -,-,-, 607852 Satellite W-chromosome 585 chrUn_NT_464670v1 13708 23592 GGXHOI 485 - 13708 23592 0 7 76,161,4376,928,731,2741,501, 0,121,305,4725,5857,6601,9383, -,-,-,-,-,-,-, 607854 Satellite W-chromosome 585 chrUn_NT_464671v1 1935 2688 GGXHOI 364 - 1935 2688 0 2 308,383, 0,370, -,-, 607859 Satellite W-chromosome 585 chrUn_NT_464671v1 2873 4253 GGXHOI 347 - 2873 4253 0 3 688,179,438, 0,709,942, -,-,-, 607860 Satellite W-chromosome 585 chrUn_NT_464671v1 21999 23414 GGXHOI 362 - 21999 23414 0 2 1004,349, 0,1066, -,-, 607886 Satellite W-chromosome 585 chrUn_NT_464672v1 626 3185 GGXHOI 383 - 626 3185 0 3 699,686,1076, 0,742,1483, -,-,-, 607888 Satellite W-chromosome 585 chrUn_NT_464672v1 6080 12413 GGXHOI 334 - 6080 12413 0 5 124,3049,2309,575,209, 0,140,3203,5534,6124, -,-,-,-,-, 607891 Satellite W-chromosome 585 chrUn_NT_464672v1 12511 16104 GGXHOI 379 - 12511 16104 0 3 901,768,1867, 0,916,1726, -,-,-, 607892 Satellite W-chromosome 585 chrUn_NT_464672v1 16179 20126 GGXHOI 387 - 16179 20126 0 4 264,1095,162,2353, 0,279,1390,1594, -,-,-,-, 607893 Satellite W-chromosome 585 chrUn_NT_464672v1 20217 23577 GGXHOI 361 - 20217 23577 0 4 2004,424,618,254, 0,2022,2469,3106, -,-,-,-, 607894 Satellite W-chromosome 585 chrUn_NT_464673v1 358 923 CR1-H2 689 + 358 923 0 2 171,350, 0,215, +,+, 607896 LINE CR1 585 chrUn_NT_464673v1 1811 5300 CR1-D 773 - 1811 5300 0 2 2557,473, 0,3016, -,-, 607897 LINE CR1 585 chrUn_NT_464673v1 6297 8259 GGLTR3F1 780 + 6297 8259 0 2 491,1469, 0,493, +,+, 607900 LTR ERVL 585 chrUn_NT_464673v1 9313 21172 GGLTR7-int 517 - 9313 21172 0 9 99,588,349,261,201,42,972,1122,556, 0,414,1946,2295,2572,2773,8113,9085,11303, -,-,-,-,-,-,-,-,-, 607903 LTR ERV1 585 chrUn_NT_464673v1 12366 16117 GGERV28_I-int 71 - 12366 16117 0 2 1993,1443, 0,2308, -,-, 607904 LTR ERVK 585 chrUn_NT_464673v1 22708 23579 GGLTR7A 780 - 22708 23579 0 2 551,318, 0,553, -,-, 607910 LTR ERV1 585 chrUn_NT_464674v1 3873 4288 CR1-Y 755 + 3873 4288 0 2 34,381, 0,34, +,+, 607914 LINE CR1 585 chrUn_NT_464674v1 4288 4708 (GATATG)n 352 + 4288 4708 0 2 61,12, 0,408, +,+, 607915 Simple_repeat Simple_repeat 585 chrUn_NT_464674v1 8011 8231 CR1-H 686 + 8011 8231 0 2 96,116, 0,104, +,+, 607922 LINE CR1 585 chrUn_NT_464674v1 13590 15633 GGLTR7-int 642 - 13590 15633 0 4 35,50,763,538, 0,35,715,1505, -,-,-,-, 607927 LTR ERV1 585 chrUn_NT_464675v1 320 1328 (CGAGG)n 519 + 320 1328 0 3 580,183,179, 0,593,829, +,+,+, 607934 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 2966 4416 (CGAGG)n 555 + 2966 4416 0 3 728,237,485, 0,728,965, +,+,+, 607940 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 4560 5566 (CGAGG)n 541 + 4560 5566 0 2 457,500, 0,506, +,+, 607944 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 5879 6542 (CGAGG)n 549 + 5879 6542 0 3 149,120,180, 0,333,483, +,+,+, 607946 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 6544 9118 (CCTCG)n 563 + 6544 9118 0 4 801,315,291,1136, 0,812,1136,1438, +,+,+,+, 607948 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 9441 10190 (CCTCG)n 608 + 9441 10190 0 3 129,67,373, 0,309,376, +,+,+, 607952 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 10393 11078 (CCTCG)n 598 + 10393 11078 0 3 145,86,87, 0,324,598, +,+,+, 607955 Simple_repeat Simple_repeat 585 chrUn_NT_464675v1 11084 13502 GGERV10_LTR 847 + 11084 13502 0 2 41,37, 0,2381, +,+, 607958 LTR ERVL 585 chrUn_NT_464675v1 11126 13336 GGLTR10D-int 926 + 11126 13336 0 2 1843,364, 0,1846, +,+, 607959 LTR ERVK 585 chrUn_NT_464675v1 13514 15977 GGLTR7-int 593 - 13514 15977 0 2 792,339, 0,2124, -,-, 607960 LTR ERV1 585 chrUn_NT_464676v1 9362 10522 CR1-F 804 + 9362 10522 0 2 343,292, 0,868, +,+, 607975 LINE CR1 585 chrUn_NT_464676v1 18440 18944 GGLTR3F2 598 + 18440 18944 0 2 227,226, 0,278, +,+, 607982 LTR ERVL 585 chrUn_NT_464677v1 2764 3622 GGXHOI 358 + 2764 3622 0 2 283,558, 0,300, +,+, 607994 Satellite W-chromosome 585 chrUn_NT_464677v1 4950 6577 GGXHOI 391 + 4950 6577 0 2 1048,516, 0,1111, +,+, 607996 Satellite W-chromosome 585 chrUn_NT_464677v1 6676 7727 GGXHOI 392 + 6676 7727 0 2 472,516, 0,535, +,+, 607997 Satellite W-chromosome 585 chrUn_NT_464677v1 7826 9370 GGXHOI 387 + 7826 9370 0 2 472,1009, 0,535, +,+, 607998 Satellite W-chromosome 585 chrUn_NT_464677v1 10698 12170 GGXHOI 382 + 10698 12170 0 2 896,513, 0,959, +,+, 608001 Satellite W-chromosome 585 chrUn_NT_464679v1 8261 9475 GGXHOI 387 + 8261 9475 0 2 371,815, 0,399, +,+, 608046 Satellite W-chromosome 585 chrUn_NT_464679v1 10293 10687 (CCTCG)n 622 + 10293 10687 0 2 182,186, 0,208, +,+, 608052 Simple_repeat Simple_repeat 585 chrUn_NT_464679v1 10682 16409 GGXHOI 397 + 10682 16409 0 3 1914,1599,2147, 0,1961,3580, +,+,+, 608053 Satellite W-chromosome 585 chrUn_NT_464679v1 16493 19060 GGXHOI 409 + 16493 19060 0 2 412,2135, 0,432, +,+, 608054 Satellite W-chromosome 585 chrUn_NT_464679v1 19144 20147 GGXHOI 398 + 19144 20147 0 2 411,572, 0,431, +,+, 608055 Satellite W-chromosome 585 chrUn_NT_464679v1 20773 21822 GGXHOI 357 + 20773 21822 0 3 360,335,248, 0,415,801, +,+,+, 608056 Satellite W-chromosome 585 chrUn_NT_464680v1 5422 10100 CR1-D2 562 + 5422 10100 0 2 808,569, 0,4109, +,+, 608066 LINE CR1 585 chrUn_NT_464680v1 6216 8838 CR1-D 671 + 6216 8838 0 3 111,885,1626, 0,111,996, +,+,+, 608067 LINE CR1 585 chrUn_NT_464681v1 1836 2454 Sat-CR1_GG 156 + 1836 2454 0 2 71,409, 0,209, +,+, 608076 Satellite Satellite 585 chrUn_NT_464682v1 1829 2214 (CAGGC)n 519 + 1829 2214 0 2 187,182, 0,203, +,+, 608125 Simple_repeat Simple_repeat 585 chrUn_NT_464682v1 2214 2891 (CAAGG)n 624 + 2214 2891 0 3 166,87,59, 0,347,618, +,+,+, 608126 Simple_repeat Simple_repeat 585 chrUn_NT_464682v1 3006 4025 (CAAGG)n 608 + 3006 4025 0 4 180,112,186,25, 0,202,631,994, +,+,+,+, 608130 Simple_repeat Simple_repeat 585 chrUn_NT_464682v1 6429 14997 GGXHOI 408 - 6429 14997 0 8 1044,1498,846,871,1708,847,237,1327, 0,1063,2593,3458,4385,6125,6986,7241, -,-,-,-,-,-,-,-, 608136 Satellite W-chromosome 585 chrUn_NT_464682v1 15075 16308 GGXHOI 357 - 15075 16308 0 2 771,446, 0,787, -,-, 608137 Satellite W-chromosome 585 chrUn_NT_464682v1 16424 23471 GGXHOI 407 - 16424 23471 0 7 1032,178,1098,1510,1099,1185,763, 0,1048,1258,2378,3920,5080,6284, -,-,-,-,-,-,-, 608138 Satellite W-chromosome 585 chrUn_NT_464683v1 3630 5575 GGXHOI 401 - 3630 5575 0 2 327,1577, 0,368, -,-, 608144 Satellite W-chromosome 585 chrUn_NT_464683v1 5609 7569 GGXHOI 401 - 5609 7569 0 3 689,415,817, 0,711,1143, -,-,-, 608146 Satellite W-chromosome 585 chrUn_NT_464683v1 8311 9510 GGXHOI 358 - 8311 9510 0 2 695,483, 0,716, -,-, 608149 Satellite W-chromosome 585 chrUn_NT_464683v1 13495 17429 GGXHOI 394 - 13495 17429 0 5 1446,484,687,741,484, 0,1467,1983,2688,3450, -,-,-,-,-, 608156 Satellite W-chromosome 585 chrUn_NT_464683v1 22128 23461 GGXHOI 342 - 22128 23461 0 3 565,147,588, 0,579,745, -,-,-, 608166 Satellite W-chromosome 585 chrUn_NT_464684v1 5115 7801 GGXHOI 441 - 5115 7801 0 5 392,474,582,646,459, 0,449,939,1563,2227, -,-,-,-,-, 608173 Satellite W-chromosome 585 chrUn_NT_464684v1 11178 14695 GGXHOI 413 - 11178 14695 0 4 1932,451,433,627, 0,1949,2439,2890, -,-,-,-, 608178 Satellite W-chromosome 585 chrUn_NT_464684v1 15783 17880 GGXHOI 450 - 15783 17880 0 2 456,1600, 0,497, -,-, 608180 Satellite W-chromosome 585 chrUn_NT_464684v1 19625 20039 GGXHOI 357 - 19625 20039 0 2 162,234, 0,180, -,-, 608183 Satellite W-chromosome 585 chrUn_NT_464684v1 21378 22822 GGXHOI 385 - 21378 22822 0 3 748,398,263, 0,766,1181, -,-,-, 608186 Satellite W-chromosome 585 chrUn_NT_464687v1 2787 4804 GGXHOI 340 - 2787 4804 0 3 1008,472,420, 0,1068,1597, -,-,-, 608216 Satellite W-chromosome 585 chrUn_NT_464687v1 4985 5721 GGXHOI 379 - 4985 5721 0 2 201,472, 0,264, -,-, 608217 Satellite W-chromosome 585 chrUn_NT_464687v1 6475 8021 GGXHOI 379 - 6475 8021 0 2 1011,472, 0,1074, -,-, 608219 Satellite W-chromosome 585 chrUn_NT_464687v1 9923 11899 GGXHOI 372 - 9923 11899 0 2 969,963, 0,1013, -,-, 608222 Satellite W-chromosome 585 chrUn_NT_464687v1 12571 13621 GGXHOI 371 - 12571 13621 0 2 515,472, 0,578, -,-, 608224 Satellite W-chromosome 585 chrUn_NT_464687v1 13720 14771 GGXHOI 378 - 13720 14771 0 2 516,472, 0,579, -,-, 608225 Satellite W-chromosome 585 chrUn_NT_464687v1 20218 21886 GGXHOI 371 - 20218 21886 0 2 516,1089, 0,579, -,-, 608233 Satellite W-chromosome 585 chrUn_NT_464688v1 11140 12615 GGLTR7B 558 + 11140 12615 0 2 881,126, 0,1349, +,+, 608260 LTR ERV1 585 chrUn_NT_464689v1 4492 13038 GGXHOI 529 - 4492 13038 0 11 659,146,299,148,455,337,630,40,785,753,1081, 0,670,1490,1800,2622,3390,4284,5232,5287,6362,7465, -,-,-,-,-,-,-,-,-,-,-, 608281 Satellite W-chromosome 585 chrUn_NT_464689v1 14391 17401 GGXHOI 538 - 14391 17401 0 5 159,869,704,423,380, 0,203,1088,2158,2630, -,-,-,-,-, 608292 Satellite W-chromosome 585 chrUn_NT_464689v1 17414 18926 GGXHOI 486 - 17414 18926 0 3 418,635,391, 0,464,1121, -,-,-, 608295 Satellite W-chromosome 585 chrUn_NT_464689v1 19002 23132 GGXHOI 563 - 19002 23132 0 7 144,157,414,146,366,224,410, 0,160,1081,1506,2212,3485,3720, -,-,-,-,-,-,-, 608296 Satellite W-chromosome 585 chrUn_NT_464692v1 1104 3249 GGXHOI 402 - 1104 3249 0 4 190,787,726,332, 0,246,1072,1813, -,-,-,-, 608322 Satellite W-chromosome 585 chrUn_NT_464692v1 4780 5765 GGXHOI 390 - 4780 5765 0 2 636,334, 0,651, -,-, 608326 Satellite W-chromosome 585 chrUn_NT_464692v1 5850 6842 GGXHOI 397 - 5850 6842 0 2 644,333, 0,659, -,-, 608327 Satellite W-chromosome 585 chrUn_NT_464692v1 6925 7917 GGXHOI 400 - 6925 7917 0 2 646,335, 0,657, -,-, 608328 Satellite W-chromosome 585 chrUn_NT_464692v1 8001 8994 GGXHOI 422 - 8001 8994 0 3 562,148,249, 0,581,744, -,-,-, 608329 Satellite W-chromosome 585 chrUn_NT_464692v1 9076 10590 GGXHOI 356 - 9076 10590 0 4 433,172,133,708, 0,445,628,806, -,-,-,-, 608330 Satellite W-chromosome 585 chrUn_NT_464692v1 10667 11621 GGXHOI 390 - 10667 11621 0 2 607,332, 0,622, -,-, 608331 Satellite W-chromosome 585 chrUn_NT_464692v1 11705 17583 GGXHOI 424 - 11705 17583 0 8 487,146,977,148,2645,968,148,250, 0,500,657,1655,1818,4478,5465,5628, -,-,-,-,-,-,-,-, 608332 Satellite W-chromosome 585 chrUn_NT_464692v1 18362 21312 GGXHOI 390 - 18362 21312 0 2 2521,411, 0,2539, -,-, 608335 Satellite W-chromosome 585 chrUn_NT_464692v1 22459 23301 GGXHOI 408 - 22459 23301 0 2 555,269, 0,573, -,-, 608337 Satellite W-chromosome 585 chrUn_NT_464693v1 3660 6069 GGLTR3F1 759 + 3660 6069 0 2 494,1913, 0,496, +,+, 608340 LTR ERVL 585 chrUn_NT_464694v1 1762 4191 GGXHOI 426 - 1762 4191 0 2 157,2259, 0,170, -,-, 608358 Satellite W-chromosome 585 chrUn_NT_464694v1 4701 7533 GGXHOI 389 - 4701 7533 0 2 2118,691, 0,2141, -,-, 608360 Satellite W-chromosome 585 chrUn_NT_464694v1 7657 10037 GGXHOI 377 - 7657 10037 0 3 1070,592,643, 0,1097,1737, -,-,-, 608361 Satellite W-chromosome 585 chrUn_NT_464694v1 10187 13721 GGXHOI 404 - 10187 13721 0 3 1600,878,1032, 0,1613,2502, -,-,-, 608362 Satellite W-chromosome 585 chrUn_NT_464694v1 13881 22699 GGXHOI 374 - 13881 22699 0 7 281,1698,4102,178,928,995,418, 0,302,2032,6196,6429,7371,8400, -,-,-,-,-,-,-, 608363 Satellite W-chromosome 585 chrUn_NT_464695v1 1107 1675 (CCTTG)n 539 + 1107 1675 0 2 280,260, 0,308, +,+, 608371 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 2323 2935 (CAAGG)n 467 + 2323 2935 0 2 380,206, 0,406, +,+, 608376 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 3049 3764 (CCTTG)n 416 + 3049 3764 0 2 403,300, 0,415, +,+, 608377 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 4163 4762 (CAAGG)n 478 + 4163 4762 0 2 373,205, 0,394, +,+, 608378 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 6802 7503 (CCTTG)n 539 + 6802 7503 0 2 178,503, 0,198, +,+, 608387 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 8881 9397 (CCTTG)n 531 + 8881 9397 0 2 259,250, 0,266, +,+, 608393 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 10456 11265 (CCTTG)n 535 + 10456 11265 0 2 286,503, 0,306, +,+, 608397 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 11664 12337 (CAAGG)n 554 + 11664 12337 0 2 251,233, 0,440, +,+, 608400 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 12336 13145 (CCTTG)n 535 + 12336 13145 0 2 286,503, 0,306, +,+, 608402 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 14523 15026 (CCTTG)n 543 + 14523 15026 0 2 259,237, 0,266, +,+, 608408 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 16401 16905 (CCTTG)n 542 + 16401 16905 0 2 259,238, 0,266, +,+, 608414 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 19314 19803 (CAAGG)n 464 + 19314 19803 0 2 130,316, 0,173, +,+, 608426 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 19802 20600 (CCTTG)n 543 + 19802 20600 0 4 205,160,18,219, 0,222,561,579, +,+,+,+, 608427 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 21014 21664 (CAAGG)n 548 + 21014 21664 0 2 308,233, 0,417, +,+, 608432 Simple_repeat Simple_repeat 585 chrUn_NT_464695v1 21663 22475 (CCTTG)n 514 + 21663 22475 0 2 391,124, 0,688, +,+, 608434 Simple_repeat Simple_repeat 585 chrUn_NT_464696v1 6781 7404 CR1-H 647 - 6781 7404 0 2 137,480, 0,143, -,-, 608443 LINE CR1 585 chrUn_NT_464696v1 9598 10053 CR1-H 635 - 9598 10053 0 2 164,291, 0,164, -,-, 608446 LINE CR1 585 chrUn_NT_464696v1 19915 20533 CR1-H 580 - 19915 20533 0 2 138,474, 0,144, -,-, 608458 LINE CR1 585 chrUn_NT_464697v1 14166 16788 GGXHOI 404 - 14166 16788 0 4 155,142,328,1880, 0,177,378,742, -,-,-,-, 608464 Satellite W-chromosome 585 chrUn_NT_464697v1 19939 23124 GGXHOI 353 - 19939 23124 0 3 2022,180,867, 0,2080,2318, -,-,-, 608468 Satellite W-chromosome 585 chrUn_NT_464698v1 911 3903 GGXHOI 364 - 911 3903 0 3 649,666,1562, 0,711,1430, -,-,-, 608471 Satellite W-chromosome 585 chrUn_NT_464698v1 5688 8900 GGXHOI 368 - 5688 8900 0 2 580,2606, 0,606, -,-, 608473 Satellite W-chromosome 585 chrUn_NT_464698v1 9619 11909 GGXHOI 331 - 9619 11909 0 4 721,844,328,303, 0,737,1643,1987, -,-,-,-, 608475 Satellite W-chromosome 585 chrUn_NT_464698v1 11993 13889 GGXHOI 385 - 11993 13889 0 3 551,876,436, 0,564,1460, -,-,-, 608476 Satellite W-chromosome 585 chrUn_NT_464698v1 13918 15650 GGXHOI 360 - 13918 15650 0 2 362,1354, 0,378, -,-, 608478 Satellite W-chromosome 585 chrUn_NT_464698v1 15677 21573 GGXHOI 371 - 15677 21573 0 3 1042,4037,780, 0,1063,5116, -,-,-, 608480 Satellite W-chromosome 585 chrUn_NT_464699v1 5902 7384 GGLTR7B 561 + 5902 7384 0 2 887,126, 0,1356, +,+, 608494 LTR ERV1 585 chrUn_NT_464699v1 9551 12044 CR1-C 870 + 9551 12044 0 3 418,1130,607, 0,756,1886, +,+,+, 608498 LINE CR1 585 chrUn_NT_464700v1 2695 3571 CR1-F0 903 - 2695 3571 0 2 138,738, 0,138, -,-, 608513 LINE CR1 585 chrUn_NT_464700v1 3675 4635 (CCTTG)n 594 + 3675 4635 0 4 242,115,31,210, 0,247,540,750, +,+,+,+, 608515 Simple_repeat Simple_repeat 585 chrUn_NT_464700v1 6005 6653 (CCTTG)n 556 + 6005 6653 0 3 186,85,185, 0,318,463, +,+,+, 608528 Simple_repeat Simple_repeat 585 chrUn_NT_464700v1 6195 6687 (GCCTG)n 556 + 6195 6687 0 2 273,34, 0,458, +,+, 608530 Simple_repeat Simple_repeat 585 chrUn_NT_464700v1 9378 12223 GGERVL-B-int 724 + 9378 12223 0 2 1931,914, 0,1931, +,+, 608536 LTR ERVL 585 chrUn_NT_464700v1 12960 14361 GGLTR7-int 308 + 12960 14361 0 3 101,266,282, 0,103,1119, +,+,+, 608538 LTR ERV1 585 chrUn_NT_464701v1 1087 1753 (CCTTG)n 534 + 1087 1753 0 2 250,369, 0,297, +,+, 608550 Simple_repeat Simple_repeat 585 chrUn_NT_464701v1 1927 3073 (CCTTG)n 517 + 1927 3073 0 4 20,271,205,290, 0,380,651,856, +,+,+,+, 608553 Simple_repeat Simple_repeat 585 chrUn_NT_464701v1 3008 3412 (GCCTG)n 419 + 3008 3412 0 2 186,218, 0,186, +,+, 608555 Simple_repeat Simple_repeat 585 chrUn_NT_464701v1 10785 11690 (GCCTG)n 526 + 10785 11690 0 4 222,52,55,55, 0,405,642,850, +,+,+,+, 608559 Simple_repeat Simple_repeat 585 chrUn_NT_464701v1 11662 12141 (CCTTG)n 564 + 11662 12141 0 2 94,206, 0,273, +,+, 608563 Simple_repeat Simple_repeat 585 chrUn_NT_464701v1 12730 13280 (CCTTG)n 488 + 12730 13280 0 2 134,238, 0,312, +,+, 608568 Simple_repeat Simple_repeat 585 chrUn_NT_464701v1 13627 19431 GGLTR7-int 668 + 13627 19431 0 3 4578,649,576, 0,4578,5228, +,+,+, 608572 LTR ERV1 585 chrUn_NT_464701v1 19847 21251 (CCTTG)n 550 + 19847 21251 0 4 176,26,180,205, 0,361,821,1199, +,+,+,+, 608575 Simple_repeat Simple_repeat 585 chrUn_NT_464702v1 2261 4229 GGXHOI 381 - 2261 4229 0 3 304,615,1016, 0,324,952, -,-,-, 608581 Satellite W-chromosome 585 chrUn_NT_464702v1 4327 14003 GGXHOI 401 - 4327 14003 0 11 1418,64,811,265,678,902,1580,933,1424,1164,150, 0,1438,1555,2401,2680,3373,4295,5890,6843,8322,9526, -,-,-,-,-,-,-,-,-,-,-, 608582 Satellite W-chromosome 585 chrUn_NT_464702v1 14095 23195 GGXHOI 419 - 14095 23195 0 14 1101,513,821,509,856,145,559,322,1381,64,890,347,433,841, 0,1114,1642,2476,3000,3868,4066,4683,5021,6422,6543,7446,7806,8259, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 608583 Satellite W-chromosome 585 chrUn_NT_464703v1 5984 8009 GGXHOI 343 - 5984 8009 0 4 136,253,922,601, 0,159,439,1424, -,-,-,-, 608591 Satellite W-chromosome 585 chrUn_NT_464703v1 8333 11163 GGXHOI 367 - 8333 11163 0 2 1698,1116, 0,1714, -,-, 608594 Satellite W-chromosome 585 chrUn_NT_464703v1 11242 13376 GGXHOI 368 - 11242 13376 0 2 147,1938, 0,196, -,-, 608595 Satellite W-chromosome 585 chrUn_NT_464703v1 13401 14410 GGXHOI 372 - 13401 14410 0 2 180,813, 0,196, -,-, 608597 Satellite W-chromosome 585 chrUn_NT_464703v1 14546 18386 GGXHOI 377 - 14546 18386 0 3 3386,150,232, 0,3397,3608, -,-,-, 608598 Satellite W-chromosome 585 chrUn_NT_464703v1 18693 19672 GGXHOI 404 - 18693 19672 0 2 238,680, 0,299, -,-, 608600 Satellite W-chromosome 585 chrUn_NT_464703v1 19739 23209 GGXHOI 385 - 19739 23209 0 3 145,1511,1741, 0,156,1729, -,-,-, 608601 Satellite W-chromosome 585 chrUn_NT_464704v1 2712 3050 GGXHOI 390 - 2712 3050 0 2 136,188, 0,150, -,-, 608603 Satellite W-chromosome 585 chrUn_NT_464704v1 3187 9976 GGXHOI 398 - 3187 9976 0 10 352,285,356,1237,2171,1097,188,194,397,259, 0,392,696,1064,2345,4532,5640,5844,6083,6530, -,-,-,-,-,-,-,-,-,-, 608604 Satellite W-chromosome 585 chrUn_NT_464704v1 11349 12175 GGXHOI 327 - 11349 12175 0 4 146,139,155,260, 0,204,394,566, -,-,-,-, 608608 Satellite W-chromosome 585 chrUn_NT_464704v1 12253 13013 GGXHOI 402 - 12253 13013 0 2 423,309, 0,451, -,-, 608609 Satellite W-chromosome 585 chrUn_NT_464704v1 14592 17146 GGXHOI 479 - 14592 17146 0 4 147,1184,148,1031, 0,160,1362,1523, -,-,-,-, 608613 Satellite W-chromosome 585 chrUn_NT_464704v1 17652 20663 GGXHOI 447 - 17652 20663 0 3 835,238,1909, 0,853,1102, -,-,-, 608615 Satellite W-chromosome 585 chrUn_NT_464705v1 16126 18719 GGXHOI 423 - 16126 18719 0 3 1001,852,671, 0,1024,1922, -,-,-, 608619 Satellite W-chromosome 585 chrUn_NT_464705v1 18814 23184 GGXHOI 431 - 18814 23184 0 4 1564,1113,457,1180, 0,1575,2716,3190, -,-,-,-, 608620 Satellite W-chromosome 585 chrUn_NT_464706v1 800 14819 GGXHOI 403 - 800 14819 0 10 863,2428,2746,209,352,2821,471,867,1373,1556, 0,878,3364,6137,6376,6787,9666,10196,11079,12463, -,-,-,-,-,-,-,-,-,-, 608622 Satellite W-chromosome 585 chrUn_NT_464706v1 21164 22303 GGXHOI 385 - 21164 22303 0 2 352,760, 0,379, -,-, 608627 Satellite W-chromosome 585 chrUn_NT_464709v1 3216 4595 GGLTR7-int 282 - 3216 4595 0 3 294,256,85, 0,1036,1294, -,-,-, 608656 LTR ERV1 585 chrUn_NT_464709v1 5332 8073 GGERVL-B-int 708 - 5332 8073 0 2 915,1826, 0,915, -,-, 608658 LTR ERVL 585 chrUn_NT_464709v1 10127 10503 (CAAGG)n 568 + 10127 10503 0 2 175,201, 0,175, +,+, 608662 Simple_repeat Simple_repeat 585 chrUn_NT_464709v1 11764 12212 (CAGGC)n 585 + 11764 12212 0 2 239,209, 0,239, +,+, 608671 Simple_repeat Simple_repeat 585 chrUn_NT_464709v1 12179 12552 (CAAGG)n 594 + 12179 12552 0 2 155,39, 0,334, +,+, 608672 Simple_repeat Simple_repeat 585 chrUn_NT_464710v1 2763 3508 GGXHOI 377 + 2763 3508 0 2 256,474, 0,271, +,+, 608688 Satellite W-chromosome 585 chrUn_NT_464710v1 3648 4697 GGXHOI 344 + 3648 4697 0 2 443,590, 0,459, +,+, 608689 Satellite W-chromosome 585 chrUn_NT_464710v1 10484 12774 GGXHOI 358 + 10484 12774 0 4 672,428,566,513, 0,701,1149,1777, +,+,+,+, 608697 Satellite W-chromosome 585 chrUn_NT_464710v1 15041 16090 GGXHOI 385 + 15041 16090 0 2 470,516, 0,533, +,+, 608702 Satellite W-chromosome 585 chrUn_NT_464710v1 16189 17603 GGXHOI 385 + 16189 17603 0 2 472,879, 0,535, +,+, 608703 Satellite W-chromosome 585 chrUn_NT_464710v1 20085 21016 GGXHOI 351 + 20085 21016 0 2 788,120, 0,811, +,+, 608706 Satellite W-chromosome 585 chrUn_NT_464710v1 21722 23143 GGXHOI 339 + 21722 23143 0 3 292,953,139, 0,310,1282, +,+,+, 608708 Satellite W-chromosome 585 chrUn_NT_464711v1 1707 3951 GGXHOI 369 - 1707 3951 0 3 614,762,812, 0,656,1432, -,-,-, 608710 Satellite W-chromosome 585 chrUn_NT_464711v1 4224 5679 GGXHOI 333 - 4224 5679 0 3 437,149,772, 0,471,683, -,-,-, 608711 Satellite W-chromosome 585 chrUn_NT_464711v1 6722 7364 GGXHOI 316 - 6722 7364 0 2 253,342, 0,300, -,-, 608713 Satellite W-chromosome 585 chrUn_NT_464711v1 9430 12413 GGXHOI 360 - 9430 12413 0 2 1104,1863, 0,1120, -,-, 608717 Satellite W-chromosome 585 chrUn_NT_464711v1 12619 14248 GGXHOI 367 - 12619 14248 0 2 606,981, 0,648, -,-, 608718 Satellite W-chromosome 585 chrUn_NT_464711v1 16298 17958 GGXHOI 383 - 16298 17958 0 2 392,1211, 0,449, -,-, 608720 Satellite W-chromosome 585 chrUn_NT_464711v1 18789 20844 GGXHOI 371 - 18789 20844 0 2 599,1398, 0,657, -,-, 608722 Satellite W-chromosome 585 chrUn_NT_464711v1 21054 22161 GGXHOI 334 - 21054 22161 0 2 182,913, 0,194, -,-, 608723 Satellite W-chromosome 585 chrUn_NT_464712v1 2750 2891 GA-rich 232 + 2750 2891 0 2 42,62, 0,79, +,+, 608733 Low_complexity Low_complexity 585 chrUn_NT_464712v1 5940 6410 A-rich 612 + 5940 6410 0 2 399,38, 0,432, +,+, 608745 Low_complexity Low_complexity 585 chrUn_NT_464712v1 10593 11079 A-rich 583 + 10593 11079 0 2 413,38, 0,448, +,+, 608759 Low_complexity Low_complexity 585 chrUn_NT_464712v1 15132 15585 A-rich 589 + 15132 15585 0 2 379,39, 0,414, +,+, 608773 Low_complexity Low_complexity 585 chrUn_NT_464712v1 16668 17178 A-rich 605 + 16668 17178 0 2 437,38, 0,472, +,+, 608775 Low_complexity Low_complexity 585 chrUn_NT_464712v1 19797 20301 A-rich 569 + 19797 20301 0 2 431,38, 0,466, +,+, 608786 Low_complexity Low_complexity 585 chrUn_NT_464712v1 21222 21362 GA-rich 202 + 21222 21362 0 2 42,48, 0,92, +,+, 608789 Low_complexity Low_complexity 585 chrUn_NT_464712v1 21381 21899 A-rich 584 + 21381 21899 0 2 445,38, 0,480, +,+, 608791 Low_complexity Low_complexity 585 chrUn_NT_464712v1 22808 22938 GA-rich 336 + 22808 22938 0 2 42,33, 0,97, +,+, 608794 Low_complexity Low_complexity 585 chrUn_NT_464714v1 6999 14905 GGXHOI 398 - 6999 14905 0 5 690,131,4241,2376,388, 0,710,854,5129,7518, -,-,-,-,-, 608805 Satellite W-chromosome 585 chrUn_NT_464714v1 16273 23105 GGXHOI 413 - 16273 23105 0 4 214,2845,1567,2071, 0,277,3140,4761, -,-,-,-, 608807 Satellite W-chromosome 585 chrUn_NT_464715v1 7487 9864 CR1-D 540 - 7487 9864 0 2 976,1124, 0,1253, -,-, 608811 LINE CR1 585 chrUn_NT_464715v1 9878 10802 TguLTR5e 334 - 9878 10802 0 2 166,94, 0,830, -,-, 608813 LTR ERVL 585 chrUn_NT_464715v1 11210 17059 GGLTR3D 495 + 11210 17059 0 2 558,57, 0,5792, +,+, 608815 LTR ERVL 585 chrUn_NT_464715v1 14862 16968 CR1-D 604 - 14862 16968 0 2 988,840, 0,1266, -,-, 608818 LINE CR1 585 chrUn_NT_464715v1 17059 17386 GGERV10_LTR 599 + 17059 17386 0 2 76,159, 0,168, +,+, 608820 LTR ERVL 585 chrUn_NT_464717v1 7587 8981 GGLTR7-int 335 - 7587 8981 0 3 275,260,101, 0,1031,1293, -,-,-, 608831 LTR ERV1 585 chrUn_NT_464717v1 9714 12451 GGERVL-B-int 711 - 9714 12451 0 2 916,1821, 0,916, -,-, 608834 LTR ERVL 585 chrUn_NT_464717v1 14276 14659 (CAAGG)n 577 + 14276 14659 0 2 182,201, 0,182, +,+, 608837 Simple_repeat Simple_repeat 585 chrUn_NT_464717v1 15222 15670 (CAGGC)n 518 + 15222 15670 0 2 233,215, 0,233, +,+, 608841 Simple_repeat Simple_repeat 585 chrUn_NT_464717v1 16177 16684 (CAAGG)n 656 + 16177 16684 0 2 262,245, 0,262, +,+, 608847 Simple_repeat Simple_repeat 585 chrUn_NT_464717v1 16715 17317 (CAGGC)n 552 + 16715 17317 0 2 198,404, 0,198, +,+, 608848 Simple_repeat Simple_repeat 585 chrUn_NT_464718v1 479 1683 CR1-D2 694 - 479 1683 0 2 426,405, 0,799, -,-, 608858 LINE CR1 585 chrUn_NT_464718v1 16163 16260 A-rich 418 + 16163 16260 0 2 22,17, 0,80, +,+, 608886 Low_complexity Low_complexity 585 chrUn_NT_464720v1 18718 21987 CR1-D2 655 - 18718 21987 0 3 572,1960,108, 0,1201,3161, -,-,-, 608941 LINE CR1 585 chrUn_NT_464720v1 22769 22971 Char12Mar1_GG 627 - 22769 22971 0 2 72,130, 0,72, -,-, 608943 DNA hAT-Charlie 585 chrUn_NT_464721v1 4218 5698 GGXHOI 509 - 4218 5698 0 2 867,592, 0,888, -,-, 608948 Satellite W-chromosome 585 chrUn_NT_464721v1 7328 8809 GGXHOI 536 - 7328 8809 0 2 1045,212, 0,1269, -,-, 608950 Satellite W-chromosome 585 chrUn_NT_464721v1 10456 11927 GGXHOI 528 - 10456 11927 0 2 19,1178, 0,293, -,-, 608953 Satellite W-chromosome 585 chrUn_NT_464721v1 13807 15258 GGXHOI 548 - 13807 15258 0 3 458,530,161, 0,500,1290, -,-,-, 608956 Satellite W-chromosome 585 chrUn_NT_464721v1 16480 17949 GGXHOI 536 - 16480 17949 0 2 1039,209, 0,1260, -,-, 608961 Satellite W-chromosome 585 chrUn_NT_464721v1 19568 21023 GGXHOI 553 - 19568 21023 0 2 455,951, 0,504, -,-, 608964 Satellite W-chromosome 585 chrUn_NT_464722v1 16849 17480 GGERVK10-int 358 + 16849 17480 0 3 54,141,72, 0,268,559, +,+,+, 608986 LTR ERVK 585 chrUn_NT_464723v1 2083 2942 GGXHOI 362 + 2083 2942 0 2 211,626, 0,233, +,+, 608996 Satellite W-chromosome 585 chrUn_NT_464723v1 7968 9019 GGXHOI 392 + 7968 9019 0 2 472,516, 0,535, +,+, 609004 Satellite W-chromosome 585 chrUn_NT_464723v1 20103 21154 GGXHOI 392 + 20103 21154 0 2 472,516, 0,535, +,+, 609020 Satellite W-chromosome 585 chrUn_NT_464724v1 1203 6820 GGXHOI 392 - 1203 6820 0 7 1480,1283,725,177,848,239,721, 0,1512,2826,3566,3774,4637,4896, -,-,-,-,-,-,-, 609026 Satellite W-chromosome 585 chrUn_NT_464724v1 9217 22901 GGXHOI 396 - 9217 22901 0 16 765,230,727,1501,1310,843,437,722,175,1086,178,2078,176,1299,846,944, 0,784,1038,1803,3326,4654,5511,5980,6724,6930,8040,8250,10352,10560,11880,12740, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 609029 Satellite W-chromosome 585 chrUn_NT_464725v1 308 987 GGXHOI 365 - 308 987 0 2 489,148, 0,531, -,-, 609031 Satellite W-chromosome 585 chrUn_NT_464725v1 1102 3671 GGXHOI 363 - 1102 3671 0 2 1099,1428, 0,1141, -,-, 609032 Satellite W-chromosome 585 chrUn_NT_464725v1 3757 5354 GGXHOI 345 - 3757 5354 0 2 1376,179, 0,1418, -,-, 609033 Satellite W-chromosome 585 chrUn_NT_464725v1 5813 7311 GGXHOI 350 - 5813 7311 0 2 1286,172, 0,1326, -,-, 609035 Satellite W-chromosome 585 chrUn_NT_464725v1 10799 17581 GGXHOI 376 - 10799 17581 0 2 2360,4380, 0,2402, -,-, 609040 Satellite W-chromosome 585 chrUn_NT_464725v1 21685 22998 GGXHOI 323 - 21685 22998 0 2 331,919, 0,394, -,-, 609046 Satellite W-chromosome 585 chrUn_NT_464726v1 13207 13552 (CCTTG)n 500 + 13207 13552 0 2 145,11, 0,334, +,+, 609062 Simple_repeat Simple_repeat 585 chrUn_NT_464726v1 13562 14047 (GCCTG)n 379 + 13562 14047 0 2 196,254, 0,231, +,+, 609064 Simple_repeat Simple_repeat 585 chrUn_NT_464726v1 14084 14712 (GCCTG)n 538 + 14084 14712 0 3 174,60,34, 0,356,594, +,+,+, 609066 Simple_repeat Simple_repeat 585 chrUn_NT_464726v1 17127 19565 GGERVL-B-int 755 + 17127 19565 0 3 305,1186,903, 0,305,1535, +,+,+, 609074 LTR ERVL 585 chrUn_NT_464726v1 20286 21654 GGLTR7-int 321 + 20286 21654 0 3 100,254,275, 0,102,1093, +,+,+, 609076 LTR ERV1 585 chrUn_NT_464728v1 1455 2339 GGXHOI 355 - 1455 2339 0 2 326,538, 0,346, -,-, 609087 Satellite W-chromosome 585 chrUn_NT_464728v1 2433 3245 GGXHOI 367 - 2433 3245 0 2 182,599, 0,213, -,-, 609088 Satellite W-chromosome 585 chrUn_NT_464728v1 3321 6655 GGXHOI 419 - 3321 6655 0 5 257,1781,751,139,312, 0,273,2089,2867,3022, -,-,-,-,-, 609089 Satellite W-chromosome 585 chrUn_NT_464728v1 6814 11838 GGXHOI 377 - 6814 11838 0 9 1082,747,348,557,938,456,360,177,145, 0,1112,1881,2244,2848,3807,4291,4667,4879, -,-,-,-,-,-,-,-,-, 609090 Satellite W-chromosome 585 chrUn_NT_464728v1 13965 21190 GGXHOI 388 - 13965 21190 0 5 146,2155,1765,897,2196, 0,164,2336,4117,5029, -,-,-,-,-, 609093 Satellite W-chromosome 585 chrUn_NT_464729v1 2440 3685 GGXHOI 360 + 2440 3685 0 2 965,262, 0,983, +,+, 609100 Satellite W-chromosome 585 chrUn_NT_464729v1 9571 11237 GGXHOI 390 + 9571 11237 0 2 1087,516, 0,1150, +,+, 609107 Satellite W-chromosome 585 chrUn_NT_464729v1 11911 13535 GGXHOI 391 + 11911 13535 0 2 1045,516, 0,1108, +,+, 609109 Satellite W-chromosome 585 chrUn_NT_464729v1 13634 14614 GGXHOI 392 + 13634 14614 0 2 472,445, 0,535, +,+, 609110 Satellite W-chromosome 585 chrUn_NT_464729v1 14860 15671 (CAAGG)n 513 + 14860 15671 0 3 386,189,200, 0,386,611, +,+,+, 609113 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 15842 16833 (CCTTG)n 494 + 15842 16833 0 2 377,586, 0,405, +,+, 609115 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 17401 18262 (CAAGG)n 503 + 17401 18262 0 3 193,374,227, 0,236,634, +,+,+, 609118 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 18375 18635 (CCTTG)n 498 + 18375 18635 0 2 178,24, 0,236, +,+, 609120 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 18688 19047 (CCTTG)n 496 + 18688 19047 0 2 156,184, 0,175, +,+, 609122 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 19150 19514 (CCTTG)n 428 + 19150 19514 0 2 262,75, 0,289, +,+, 609124 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 19768 20081 (GCCTG)n 368 + 19768 20081 0 2 90,41, 0,272, +,+, 609126 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 20127 20482 (GCCTG)n 309 + 20127 20482 0 2 40,265, 0,90, +,+, 609129 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 20505 21115 (CAAGG)n 520 + 20505 21115 0 2 139,291, 0,319, +,+, 609130 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 21568 21874 (GCCTG)n 374 + 21568 21874 0 2 84,34, 0,272, +,+, 609135 Simple_repeat Simple_repeat 585 chrUn_NT_464729v1 22303 22908 (CAAGG)n 472 + 22303 22908 0 2 230,34, 0,571, +,+, 609140 Simple_repeat Simple_repeat 585 chrUn_NT_464730v1 11986 12206 CR1-H 674 + 11986 12206 0 2 96,116, 0,104, +,+, 609150 LINE CR1 585 chrUn_NT_464730v1 12204 13044 Z-REP 525 + 12204 13044 0 2 441,315, 0,525, +,+, 609151 Satellite macro 585 chrUn_NT_464730v1 17406 19322 GGLTR7-int 642 - 17406 19322 0 4 33,74,657,519, 0,34,740,1397, -,-,-,-, 609155 LTR ERV1 585 chrUn_NT_464731v1 20384 22121 GGXHOI 461 - 20384 22121 0 6 378,430,279,258,143,145, 0,398,850,1154,1432,1592, -,-,-,-,-,-, 609164 Satellite W-chromosome 585 chrUn_NT_464732v1 7601 8729 CR1-B2 680 + 7601 8729 0 2 226,899, 0,229, +,+, 609169 LINE CR1 585 chrUn_NT_464734v1 13890 17012 GGLTR7-int 411 - 13890 17012 0 4 277,947,1640,116, 0,324,1366,3006, -,-,-,-, 609200 LTR ERV1 585 chrUn_NT_464735v1 13660 22878 GGXHOI 403 - 13660 22878 0 9 1521,519,784,1388,980,481,2503,392,442, 0,1536,2077,2872,4277,5277,5778,8334,8776, -,-,-,-,-,-,-,-,-, 609216 Satellite W-chromosome 585 chrUn_NT_464736v1 3217 4948 GGERVL-A-int 751 + 3217 4948 0 2 457,1274, 0,457, +,+, 609218 LTR ERVL 585 chrUn_NT_464736v1 20262 22644 GGLTR7-int 590 + 20262 22644 0 3 339,572,85, 0,1655,2297, +,+,+, 609237 LTR ERV1 585 chrUn_NT_464737v1 3986 5310 CR1-D2 705 + 3986 5310 0 2 529,440, 0,884, +,+, 609246 LINE CR1 585 chrUn_NT_464737v1 9722 10593 CR1-D2 655 - 9722 10593 0 2 53,772, 0,99, -,-, 609250 LINE CR1 585 chrUn_NT_464737v1 10597 11704 GGERVL-A-int 319 - 10597 11704 0 3 109,242,531, 0,199,576, -,-,-, 609251 LTR ERVL 585 chrUn_NT_464737v1 16538 16996 CR1-X2 455 + 16538 16996 0 2 242,199, 0,259, +,+, 609259 LINE CR1 585 chrUn_NT_464739v1 2600 3056 GGXHOI 373 - 2600 3056 0 2 296,131, 0,325, -,-, 609273 Satellite W-chromosome 585 chrUn_NT_464739v1 5810 6647 GGXHOI 335 - 5810 6647 0 2 304,470, 0,367, -,-, 609278 Satellite W-chromosome 585 chrUn_NT_464739v1 8473 11237 GGXHOI 385 - 8473 11237 0 3 507,1085,1046, 0,570,1718, -,-,-, 609282 Satellite W-chromosome 585 chrUn_NT_464739v1 14201 14656 GGXHOI 229 - 14201 14656 0 2 139,293, 0,162, -,-, 609286 Satellite W-chromosome 585 chrUn_NT_464740v1 4065 4358 CR1-X2 462 - 4065 4358 0 2 230,63, 0,230, -,-, 609297 LINE CR1 585 chrUn_NT_464742v1 2443 4312 GGXHOI 383 + 2443 4312 0 2 1201,618, 0,1251, +,+, 609318 Satellite W-chromosome 585 chrUn_NT_464742v1 4412 7632 GGXHOI 492 + 4412 7632 0 4 356,152,1188,1430, 0,414,583,1790, +,+,+,+, 609319 Satellite W-chromosome 585 chrUn_NT_464742v1 7650 18202 GGXHOI 420 - 7650 18202 0 18 166,1469,1029,235,526,432,356,541,576,190,276,286,1380,361,656,1129,307,269, 0,216,1700,2746,2997,3535,3981,4358,4912,5505,5714,6006,6351,7748,8151,8822,9962,10283, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 609320 Satellite W-chromosome 585 chrUn_NT_464742v1 19074 21212 GGXHOI 438 - 19074 21212 0 5 943,233,395,150,329, 0,992,1236,1642,1809, -,-,-,-,-, 609323 Satellite W-chromosome 585 chrUn_NT_464742v1 21823 22804 GGXHOI 443 - 21823 22804 0 2 554,409, 0,572, -,-, 609325 Satellite W-chromosome 585 chrUn_NT_464743v1 2478 2799 GGERV10_LTR 572 - 2478 2799 0 2 160,57, 0,264, -,-, 609329 LTR ERVL 585 chrUn_NT_464743v1 22221 22871 CR1-Y2_Aves 196 + 22221 22871 0 2 479,127, 0,523, +,+, 609344 LINE CR1 585 chrUn_NT_464744v1 1673 1779 (TCC)n 804 + 1673 1779 0 2 22,22, 0,84, +,+, 609346 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 2006 2139 (TCC)n 740 + 2006 2139 0 2 28,43, 0,90, +,+, 609347 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 4269 4735 (TCC)n 797 + 4269 4735 0 6 22,22,22,19,28,43, 0,84,168,252,333,423, +,+,+,+,+,+, 609349 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 6865 7250 (TCC)n 799 + 6865 7250 0 5 22,22,22,28,43, 0,84,168,252,342, +,+,+,+,+, 609351 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 9382 9850 (TCC)n 800 + 9382 9850 0 6 22,22,22,22,28,43, 0,84,167,251,335,425, +,+,+,+,+,+, 609353 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 11979 12447 (TCC)n 799 + 11979 12447 0 6 22,22,22,22,28,42, 0,84,168,252,336,426, +,+,+,+,+,+, 609355 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 14560 14665 (TCC)n 804 + 14560 14665 0 2 22,22, 0,83, +,+, 609357 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 14811 15030 (TCC)n 780 + 14811 15030 0 3 22,29,42, 0,85,177, +,+,+, 609358 Simple_repeat Simple_repeat 585 chrUn_NT_464744v1 21910 22207 (TCC)n 795 + 21910 22207 0 4 22,22,28,41, 0,83,166,256, +,+,+,+, 609362 Simple_repeat Simple_repeat 585 chrUn_NT_464745v1 973 6547 GGXHOI 379 - 973 6547 0 2 379,5152, 0,422, -,-, 609365 Satellite W-chromosome 585 chrUn_NT_464745v1 6712 22790 GGXHOI 413 - 6712 22790 0 4 5737,3155,5450,1670, 0,5749,8921,14408, -,-,-,-, 609366 Satellite W-chromosome 585 chrUn_NT_464750v1 8703 8857 (C)n 856 + 8703 8857 0 2 100,31, 0,123, +,+, 609437 Simple_repeat Simple_repeat 585 chrUn_NT_464752v1 385 2592 GGXHOI 387 + 385 2592 0 3 471,1094,516, 0,534,1691, +,+,+, 609454 Satellite W-chromosome 585 chrUn_NT_464752v1 3928 5386 GGXHOI 381 + 3928 5386 0 2 385,1010, 0,448, +,+, 609457 Satellite W-chromosome 585 chrUn_NT_464752v1 5806 6451 GGXHOI 290 + 5806 6451 0 2 70,558, 0,87, +,+, 609460 Satellite W-chromosome 585 chrUn_NT_464752v1 8353 9404 GGXHOI 392 + 8353 9404 0 2 472,516, 0,535, +,+, 609463 Satellite W-chromosome 585 chrUn_NT_464752v1 9503 10554 GGXHOI 392 + 9503 10554 0 2 472,516, 0,535, +,+, 609464 Satellite W-chromosome 585 chrUn_NT_464752v1 10653 11704 GGXHOI 392 + 10653 11704 0 2 472,516, 0,535, +,+, 609465 Satellite W-chromosome 585 chrUn_NT_464752v1 11803 12854 GGXHOI 392 + 11803 12854 0 2 472,516, 0,535, +,+, 609466 Satellite W-chromosome 585 chrUn_NT_464752v1 14277 15328 GGXHOI 392 + 14277 15328 0 2 472,516, 0,535, +,+, 609470 Satellite W-chromosome 585 chrUn_NT_464752v1 15427 16478 GGXHOI 392 + 15427 16478 0 2 472,516, 0,535, +,+, 609471 Satellite W-chromosome 585 chrUn_NT_464752v1 16577 17628 GGXHOI 392 + 16577 17628 0 2 472,516, 0,535, +,+, 609472 Satellite W-chromosome 585 chrUn_NT_464752v1 17727 18778 GGXHOI 392 + 17727 18778 0 2 472,516, 0,535, +,+, 609473 Satellite W-chromosome 585 chrUn_NT_464752v1 18877 19928 GGXHOI 392 + 18877 19928 0 2 472,516, 0,535, +,+, 609474 Satellite W-chromosome 585 chrUn_NT_464752v1 20027 21078 GGXHOI 392 + 20027 21078 0 2 472,516, 0,535, +,+, 609475 Satellite W-chromosome 585 chrUn_NT_464752v1 21177 22690 GGXHOI 386 + 21177 22690 0 2 472,978, 0,535, +,+, 609476 Satellite W-chromosome 585 chrUn_NT_464754v1 10306 11640 GGXHOI 359 + 10306 11640 0 3 373,194,683, 0,401,651, +,+,+, 609488 Satellite W-chromosome 585 chrUn_NT_464754v1 11800 12761 (CCTCG)n 650 + 11800 12761 0 3 240,487,183, 0,260,778, +,+,+, 609489 Simple_repeat Simple_repeat 585 chrUn_NT_464754v1 13967 15586 GGXHOI 354 + 13967 15586 0 3 302,338,946, 0,322,673, +,+,+, 609492 Satellite W-chromosome 585 chrUn_NT_464754v1 18402 20968 GGXHOI 404 + 18402 20968 0 2 413,2133, 0,433, +,+, 609494 Satellite W-chromosome 585 chrUn_NT_464754v1 21265 22273 GGXHOI 373 + 21265 22273 0 3 98,462,374, 0,113,634, +,+,+, 609495 Satellite W-chromosome 585 chrUn_NT_464755v1 2157 8298 GGXHOI 420 - 2157 8298 0 10 643,899,145,981,148,678,146,892,1129,333, 0,658,1570,1730,2731,2894,3593,3753,4664,5808, -,-,-,-,-,-,-,-,-,-, 609498 Satellite W-chromosome 585 chrUn_NT_464755v1 8660 10201 GGXHOI 398 - 8660 10201 0 4 145,764,250,307, 0,160,969,1234, -,-,-,-, 609500 Satellite W-chromosome 585 chrUn_NT_464755v1 10290 11084 GGXHOI 385 - 10290 11084 0 2 632,147, 0,647, -,-, 609501 Satellite W-chromosome 585 chrUn_NT_464755v1 11322 12705 GGXHOI 343 - 11322 12705 0 3 624,403,278, 0,646,1105, -,-,-, 609502 Satellite W-chromosome 585 chrUn_NT_464755v1 12894 14401 GGXHOI 385 - 12894 14401 0 3 287,1042,103, 0,349,1404, -,-,-, 609503 Satellite W-chromosome 585 chrUn_NT_464755v1 15988 16643 GGXHOI 340 - 15988 16643 0 2 405,198, 0,457, -,-, 609506 Satellite W-chromosome 585 chrUn_NT_464755v1 16812 17515 GGXHOI 397 - 16812 17515 0 2 347,304, 0,399, -,-, 609507 Satellite W-chromosome 585 chrUn_NT_464755v1 17831 18795 GGXHOI 405 - 17831 18795 0 3 481,146,313, 0,494,651, -,-,-, 609508 Satellite W-chromosome 585 chrUn_NT_464755v1 19383 19702 GGXHOI 407 - 19383 19702 0 2 146,147, 0,172, -,-, 609510 Satellite W-chromosome 585 chrUn_NT_464755v1 19968 20757 GGXHOI 371 - 19968 20757 0 2 608,153, 0,636, -,-, 609511 Satellite W-chromosome 585 chrUn_NT_464755v1 21831 22713 GGXHOI 403 - 21831 22713 0 3 530,162,122, 0,587,760, -,-,-, 609514 Satellite W-chromosome 585 chrUn_NT_464756v1 5885 6110 (GCCCCACAGCT)n 410 + 5885 6110 0 2 98,85, 0,140, +,+, 609520 Satellite Satellite 585 chrUn_NT_464756v1 21444 22114 GGERVL-B-int 621 + 21444 22114 0 2 466,202, 0,468, +,+, 609528 LTR ERVL 585 chrUn_NT_464757v1 9501 9799 (ACCCCATAGGG)n 574 + 9501 9799 0 2 92,152, 0,146, +,+, 609542 Satellite Satellite 585 chrUn_NT_464757v1 19931 20848 GGXHOI 500 + 19931 20848 0 2 164,736, 0,181, +,+, 609553 Satellite W-chromosome 585 chrUn_NT_464759v1 9923 9979 (CCCCTC)n 516 + 9923 9979 0 2 8,19, 0,37, +,+, 609581 Simple_repeat Simple_repeat 585 chrUn_NT_464759v1 11329 14438 GGLTR7-int 426 + 11329 14438 0 4 116,1625,949,277, 0,116,1836,2832, +,+,+,+, 609584 LTR ERV1 585 chrUn_NT_464760v1 13714 14562 Z-REP 528 + 13714 14562 0 2 441,323, 0,525, +,+, 609599 Satellite macro 585 chrUn_NT_464760v1 19332 21250 GGLTR7-int 651 - 19332 21250 0 4 33,75,660,532, 0,35,726,1386, -,-,-,-, 609603 LTR ERV1 585 chrUn_NT_464761v1 6851 7973 CR1-B2 697 - 6851 7973 0 2 895,224, 0,898, -,-, 609610 LINE CR1 585 chrUn_NT_464761v1 13237 13546 CR1-X 512 - 13237 13546 0 3 50,78,171, 0,60,138, -,-,-, 609615 LINE CR1 585 chrUn_NT_464761v1 19371 20499 CR1-B2 700 + 19371 20499 0 2 225,900, 0,228, +,+, 609619 LINE CR1 585 chrUn_NT_464762v1 623 3347 GGXHOI 548 - 623 3347 0 5 19,428,158,438,671, 0,456,895,1602,2053, -,-,-,-,-, 609626 Satellite W-chromosome 585 chrUn_NT_464762v1 3441 6776 GGXHOI 536 - 3441 6776 0 5 533,33,329,131,928, 0,973,1224,2236,2407, -,-,-,-,-, 609630 Satellite W-chromosome 585 chrUn_NT_464762v1 7931 9140 GGXHOI 413 - 7931 9140 0 3 213,327,316, 0,241,893, -,-,-, 609637 Satellite W-chromosome 585 chrUn_NT_464762v1 9343 10950 GGXHOI 457 - 9343 10950 0 3 1049,74,133, 0,1340,1474, -,-,-, 609640 Satellite W-chromosome 585 chrUn_NT_464762v1 11475 14166 GGXHOI 546 - 11475 14166 0 3 1032,36,981, 0,1462,1710, -,-,-, 609644 Satellite W-chromosome 585 chrUn_NT_464762v1 14205 15390 GGXHOI 501 - 14205 15390 0 3 456,208,231, 0,733,954, -,-,-, 609648 Satellite W-chromosome 585 chrUn_NT_464762v1 15553 16694 GGXHOI 516 - 15553 16694 0 2 598,240, 0,901, -,-, 609650 Satellite W-chromosome 585 chrUn_NT_464762v1 16736 21422 GGXHOI 549 - 16736 21422 0 6 407,227,275,581,609,220, 0,1148,1386,2097,3239,4466, -,-,-,-,-,-, 609653 Satellite W-chromosome 585 chrUn_NT_464762v1 21503 22665 GGXHOI 460 - 21503 22665 0 3 131,210,771, 0,166,391, -,-,-, 609658 Satellite W-chromosome 585 chrUn_NT_464763v1 587 1790 GGXHOI 326 - 587 1790 0 2 635,553, 0,650, -,-, 609660 Satellite W-chromosome 585 chrUn_NT_464763v1 1930 3627 GGXHOI 351 - 1930 3627 0 3 838,270,473, 0,896,1224, -,-,-, 609661 Satellite W-chromosome 585 chrUn_NT_464763v1 3767 4571 GGXHOI 350 - 3767 4571 0 2 272,474, 0,330, -,-, 609662 Satellite W-chromosome 585 chrUn_NT_464763v1 4874 10370 GGXHOI 350 - 4874 10370 0 8 592,961,268,1453,968,270,312,434, 0,608,1627,1952,3421,4447,4733,5062, -,-,-,-,-,-,-,-, 609663 Satellite W-chromosome 585 chrUn_NT_464763v1 10510 13030 GGXHOI 348 - 10510 13030 0 4 843,268,679,556, 0,901,1227,1964, -,-,-,-, 609664 Satellite W-chromosome 585 chrUn_NT_464763v1 13864 14747 GGXHOI 340 - 13864 14747 0 2 557,264, 0,619, -,-, 609666 Satellite W-chromosome 585 chrUn_NT_464763v1 17918 18474 GGXHOI 368 - 17918 18474 0 2 269,270, 0,286, -,-, 609671 Satellite W-chromosome 585 chrUn_NT_464763v1 19927 20486 GGXHOI 370 - 19927 20486 0 2 270,272, 0,287, -,-, 609674 Satellite W-chromosome 585 chrUn_NT_464764v1 4836 5929 GGXHOI 295 - 4836 5929 0 3 130,491,381, 0,158,712, -,-,-, 609684 Satellite W-chromosome 585 chrUn_NT_464764v1 9071 10502 GGXHOI 360 - 9071 10502 0 2 996,372, 0,1059, -,-, 609690 Satellite W-chromosome 585 chrUn_NT_464764v1 10687 13245 GGXHOI 366 - 10687 13245 0 2 515,2025, 0,533, -,-, 609691 Satellite W-chromosome 585 chrUn_NT_464764v1 15048 15955 GGXHOI 369 - 15048 15955 0 2 464,388, 0,519, -,-, 609695 Satellite W-chromosome 585 chrUn_NT_464764v1 16677 17749 GGXHOI 344 - 16677 17749 0 2 724,331, 0,741, -,-, 609697 Satellite W-chromosome 585 chrUn_NT_464764v1 17837 18883 GGXHOI 377 - 17837 18883 0 2 511,472, 0,574, -,-, 609698 Satellite W-chromosome 585 chrUn_NT_464764v1 20128 21088 GGXHOI 380 - 20128 21088 0 2 513,384, 0,576, -,-, 609701 Satellite W-chromosome 585 chrUn_NT_464765v1 888 1504 GGXHOI 546 - 888 1504 0 2 167,230, 0,386, -,-, 609706 Satellite W-chromosome 585 chrUn_NT_464765v1 1536 13141 GGXHOI 560 - 1536 13141 0 12 531,455,546,344,691,455,550,746,261,1063,22,3903, 0,780,1567,2325,2720,3661,4367,4966,5920,6195,7654,7702, -,-,-,-,-,-,-,-,-,-,-,-, 609709 Satellite W-chromosome 585 chrUn_NT_464765v1 13172 16832 GGXHOI 542 - 13172 16832 0 7 365,328,388,165,140,498,148, 0,419,1054,1804,2181,2764,3512, -,-,-,-,-,-,-, 609718 Satellite W-chromosome 585 chrUn_NT_464765v1 16963 20240 GGXHOI 533 - 16963 20240 0 5 430,327,517,758,207, 0,679,1360,2291,3070, -,-,-,-,-, 609724 Satellite W-chromosome 585 chrUn_NT_464765v1 20920 22608 GGXHOI 548 - 20920 22608 0 2 1269,55, 0,1633, -,-, 609730 Satellite W-chromosome 585 chrUn_NT_464767v1 593 1742 GGXHOI 355 - 593 1742 0 2 617,469, 0,680, -,-, 609737 Satellite W-chromosome 585 chrUn_NT_464767v1 4504 5205 GGXHOI 325 - 4504 5205 0 3 183,368,82, 0,215,619, -,-,-, 609743 Satellite W-chromosome 585 chrUn_NT_464767v1 5337 6747 GGXHOI 335 - 5337 6747 0 2 530,840, 0,570, -,-, 609744 Satellite W-chromosome 585 chrUn_NT_464767v1 10332 11874 GGXHOI 376 - 10332 11874 0 2 1007,472, 0,1070, -,-, 609749 Satellite W-chromosome 585 chrUn_NT_464767v1 11973 13024 GGXHOI 378 - 11973 13024 0 2 516,472, 0,579, -,-, 609750 Satellite W-chromosome 585 chrUn_NT_464767v1 13123 14174 GGXHOI 378 - 13123 14174 0 2 516,472, 0,579, -,-, 609751 Satellite W-chromosome 585 chrUn_NT_464767v1 14273 15324 GGXHOI 378 - 14273 15324 0 2 516,472, 0,579, -,-, 609752 Satellite W-chromosome 585 chrUn_NT_464767v1 19498 21459 GGXHOI 365 - 19498 21459 0 2 1004,895, 0,1066, -,-, 609757 Satellite W-chromosome 585 chrUn_NT_464768v1 969 1971 GGXHOI 372 - 969 1971 0 3 135,137,698, 0,149,304, -,-,-, 609762 Satellite W-chromosome 585 chrUn_NT_464768v1 3200 4159 GGXHOI 322 - 3200 4159 0 5 138,84,225,144,291, 0,150,246,482,668, -,-,-,-,-, 609765 Satellite W-chromosome 585 chrUn_NT_464768v1 4249 4946 GGXHOI 351 - 4249 4946 0 3 120,155,361, 0,139,336, -,-,-, 609766 Satellite W-chromosome 585 chrUn_NT_464769v1 18812 19854 CR1-B2 497 + 18812 19854 0 2 201,837, 0,205, +,+, 609788 LINE CR1 585 chrUn_NT_464770v1 5167 5553 G-rich 421 + 5167 5553 0 2 276,51, 0,335, +,+, 609795 Low_complexity Low_complexity 585 chrUn_NT_464770v1 10335 11062 (CCTTG)n 608 + 10335 11062 0 2 157,234, 0,493, +,+, 609801 Simple_repeat Simple_repeat 585 chrUn_NT_464770v1 10839 11913 (GCCTG)n 510 + 10839 11913 0 2 425,472, 0,602, +,+, 609803 Simple_repeat Simple_repeat 585 chrUn_NT_464770v1 15476 18326 GGERVL-B-int 712 + 15476 18326 0 2 1931,919, 0,1931, +,+, 609820 LTR ERVL 585 chrUn_NT_464770v1 19104 20461 GGLTR7-int 380 + 19104 20461 0 3 60,236,278, 0,88,1079, +,+,+, 609822 LTR ERV1 585 chrUn_NT_464772v1 11385 13794 Sat-CR1_GG 219 - 11385 13794 0 2 19,201, 0,2208, -,-, 609867 Satellite Satellite 585 chrUn_NT_464772v1 14026 16305 Sat-CR1_GG 391 - 14026 16305 0 2 60,192, 0,2087, -,-, 609869 Satellite Satellite 585 chrUn_NT_464772v1 16586 18944 Sat-CR1_GG 287 - 16586 18944 0 2 366,119, 0,2239, -,-, 609871 Satellite Satellite 585 chrUn_NT_464772v1 19166 21479 Sat-CR1_GG 325 - 19166 21479 0 2 132,184, 0,2129, -,-, 609874 Satellite Satellite 585 chrUn_NT_464773v1 14568 19240 CR1-D2 566 - 14568 19240 0 2 569,798, 0,3874, -,-, 609888 LINE CR1 585 chrUn_NT_464773v1 15821 18438 CR1-D 681 - 15821 18438 0 3 1643,885,89, 0,1643,2528, -,-,-, 609889 LINE CR1 585 chrUn_NT_464773v1 19239 19482 Char12Mar1_GG 578 - 19239 19482 0 2 72,171, 0,72, -,-, 609890 DNA hAT-Charlie 585 chrUn_NT_464774v1 7826 9370 GGXHOI 386 + 7826 9370 0 2 472,1009, 0,535, +,+, 609902 Satellite W-chromosome 585 chrUn_NT_464774v1 11274 12325 GGXHOI 392 + 11274 12325 0 2 472,516, 0,535, +,+, 609905 Satellite W-chromosome 585 chrUn_NT_464774v1 12424 13475 GGXHOI 392 + 12424 13475 0 2 472,516, 0,535, +,+, 609906 Satellite W-chromosome 585 chrUn_NT_464774v1 15852 16903 GGXHOI 392 + 15852 16903 0 2 472,516, 0,535, +,+, 609910 Satellite W-chromosome 585 chrUn_NT_464774v1 19862 20324 GGXHOI 262 + 19862 20324 0 2 138,308, 0,154, +,+, 609914 Satellite W-chromosome 585 chrUn_NT_464775v1 4385 9761 Char12Mar1_GG 397 - 4385 9761 0 2 880,251, 0,5125, -,-, 609922 DNA hAT-Charlie 585 chrUn_NT_464775v1 13973 16787 Char12Mar1_GG 438 - 13973 16787 0 2 906,251, 0,2563, -,-, 609926 DNA hAT-Charlie 585 chrUn_NT_464776v1 3977 9357 GGXHOI 404 - 3977 9357 0 6 436,1141,1143,1093,1055,412, 0,456,1617,2780,3893,4968, -,-,-,-,-,-, 609934 Satellite W-chromosome 585 chrUn_NT_464776v1 9503 19598 GGXHOI 416 - 9503 19598 0 12 560,1141,1140,148,937,534,517,1130,1137,1081,1129,412, 0,580,1741,2901,3063,4020,4589,5126,6276,7433,8534,9683, -,-,-,-,-,-,-,-,-,-,-,-, 609935 Satellite W-chromosome 585 chrUn_NT_464776v1 19740 22484 GGXHOI 430 - 19740 22484 0 4 522,1062,147,967, 0,542,1617,1777, -,-,-,-, 609936 Satellite W-chromosome 585 chrUn_NT_464777v1 4376 4457 (C)n 716 + 4376 4457 0 2 21,35, 0,46, +,+, 609941 Simple_repeat Simple_repeat 585 chrUn_NT_464778v1 5456 6581 CR1-B2 706 - 5456 6581 0 2 897,225, 0,900, -,-, 609970 LINE CR1 585 chrUn_NT_464778v1 19280 20653 CR1-X 379 - 19280 20653 0 2 156,111, 0,1262, -,-, 609979 LINE CR1 585 chrUn_NT_464779v1 2284 6891 CR1-H 557 + 2284 6891 0 2 2356,840, 0,3767, +,+, 609982 LINE CR1 585 chrUn_NT_464779v1 6892 11501 CR1-H 557 + 6892 11501 0 2 2358,840, 0,3769, +,+, 609984 LINE CR1 585 chrUn_NT_464779v1 11502 16107 CR1-H 558 + 11502 16107 0 2 2356,838, 0,3767, +,+, 609986 LINE CR1 585 chrUn_NT_464779v1 16108 20698 CR1-H 538 + 16108 20698 0 2 2345,838, 0,3752, +,+, 609988 LINE CR1 585 chrUn_NT_464779v1 20684 22445 CR1-C2 573 + 20684 22445 0 3 671,389,467, 0,735,1294, +,+,+, 609990 LINE CR1 585 chrUn_NT_464780v1 576 7370 GGXHOI 565 - 576 7370 0 6 2146,59,125,331,362,600, 0,2487,2587,2882,3781,6194, -,-,-,-,-,-, 609994 Satellite W-chromosome 585 chrUn_NT_464780v1 7392 8370 GGXHOI 550 - 7392 8370 0 2 480,123, 0,855, -,-, 610000 Satellite W-chromosome 585 chrUn_NT_464780v1 8856 12232 GGXHOI 568 - 8856 12232 0 4 24,28,109,318, 0,1784,2047,3058, -,-,-,-, 610003 Satellite W-chromosome 585 chrUn_NT_464780v1 11977 13233 Sat-CR1_GG 170 - 11977 13233 0 2 289,61, 0,1195, -,-, 610007 Satellite Satellite 585 chrUn_NT_464780v1 13623 21079 GGXHOI 560 - 13623 21079 0 11 278,28,462,28,269,27,328,575,63,22,461, 0,995,1242,2131,2371,3192,3734,4624,5212,5993,6995, -,-,-,-,-,-,-,-,-,-,-, 610011 Satellite W-chromosome 585 chrUn_NT_464781v1 3813 7541 CR1-H 666 - 3813 7541 0 4 142,475,159,295, 0,158,3274,3433, -,-,-,-, 610029 LINE CR1 585 chrUn_NT_464781v1 17846 18469 CR1-H 685 - 17846 18469 0 2 139,478, 0,145, -,-, 610042 LINE CR1 585 chrUn_NT_464781v1 21832 22287 CR1-H 677 - 21832 22287 0 2 162,293, 0,162, -,-, 610046 LINE CR1 585 chrUn_NT_464782v1 40 2181 Sat-CR1_GG 182 - 40 2181 0 2 451,864, 0,1277, -,-, 610049 Satellite Satellite 585 chrUn_NT_464782v1 491 1317 GGXHOI 550 - 491 1317 0 2 409,53, 0,773, -,-, 610050 Satellite W-chromosome 585 chrUn_NT_464782v1 1360 3771 GGXHOI 573 - 1360 3771 0 2 830,1538, 0,873, -,-, 610051 Satellite W-chromosome 585 chrUn_NT_464782v1 3798 7677 GGXHOI 560 - 3798 7677 0 4 108,481,123,677, 0,747,1606,3202, -,-,-,-, 610053 Satellite W-chromosome 585 chrUn_NT_464782v1 9211 10799 GGXHOI 557 - 9211 10799 0 2 1009,536, 0,1052, -,-, 610060 Satellite W-chromosome 585 chrUn_NT_464782v1 15648 20251 Sat-CR1_GG 158 - 15648 20251 0 2 3099,879, 0,3724, -,-, 610065 Satellite Satellite 585 chrUn_NT_464782v1 19400 21183 GGXHOI 551 - 19400 21183 0 3 612,144,778, 0,830,1005, -,-,-, 610067 Satellite W-chromosome 585 chrUn_NT_464782v1 21195 22401 GGXHOI 586 - 21195 22401 0 2 159,350, 0,856, -,-, 610069 Satellite W-chromosome 585 chrUn_NT_464783v1 5363 6990 GGXHOI 374 - 5363 6990 0 2 558,1051, 0,576, -,-, 610073 Satellite W-chromosome 585 chrUn_NT_464783v1 7173 10571 GGXHOI 378 - 7173 10571 0 2 2356,1024, 0,2374, -,-, 610074 Satellite W-chromosome 585 chrUn_NT_464783v1 10777 15947 GGXHOI 372 - 10777 15947 0 4 574,1710,1626,1177, 0,616,2344,3993, -,-,-,-, 610075 Satellite W-chromosome 585 chrUn_NT_464783v1 16128 20635 GGXHOI 360 - 16128 20635 0 6 64,482,1464,1031,1056,259, 0,81,617,2135,3179,4248, -,-,-,-,-,-, 610076 Satellite W-chromosome 585 chrUn_NT_464785v1 8710 10470 GGERVL-A-int 752 + 8710 10470 0 2 457,1303, 0,457, +,+, 610086 LTR ERVL 585 chrUn_NT_464786v1 2473 4666 GGXHOI 371 - 2473 4666 0 3 348,1008,805, 0,364,1388, -,-,-, 610098 Satellite W-chromosome 585 chrUn_NT_464786v1 5583 9166 GGXHOI 358 - 5583 9166 0 5 624,721,1164,388,554, 0,654,1396,2622,3029, -,-,-,-,-, 610100 Satellite W-chromosome 585 chrUn_NT_464786v1 10172 13023 GGXHOI 354 - 10172 13023 0 2 798,2032, 0,819, -,-, 610102 Satellite W-chromosome 585 chrUn_NT_464786v1 13700 16764 GGXHOI 362 - 13700 16764 0 3 1698,714,532, 0,1761,2532, -,-,-, 610104 Satellite W-chromosome 585 chrUn_NT_464786v1 17830 19244 GGXHOI 372 - 17830 19244 0 2 1086,312, 0,1102, -,-, 610106 Satellite W-chromosome 585 chrUn_NT_464786v1 21346 21901 GGXHOI 352 - 21346 21901 0 2 268,270, 0,285, -,-, 610109 Satellite W-chromosome 585 chrUn_NT_464787v1 3979 5120 CR1-D 732 + 3979 5120 0 2 328,793, 0,348, +,+, 610114 LINE CR1 585 chrUn_NT_464787v1 11393 11798 (CCCTAA)n 559 + 11393 11798 0 2 178,171, 0,234, +,+, 610117 Simple_repeat Simple_repeat 585 chrUn_NT_464788v1 3035 3510 GGXHOI 366 - 3035 3510 0 2 170,267, 0,208, -,-, 610127 Satellite W-chromosome 585 chrUn_NT_464788v1 6182 6943 GGXHOI 382 - 6182 6943 0 2 473,265, 0,496, -,-, 610131 Satellite W-chromosome 585 chrUn_NT_464788v1 7368 8310 GGXHOI 390 - 7368 8310 0 2 472,456, 0,486, -,-, 610133 Satellite W-chromosome 585 chrUn_NT_464788v1 10064 10499 GGXHOI 411 - 10064 10499 0 2 178,242, 0,193, -,-, 610136 Satellite W-chromosome 585 chrUn_NT_464788v1 10705 12086 GGXHOI 416 - 10705 12086 0 4 229,395,475,232, 0,245,660,1149, -,-,-,-, 610137 Satellite W-chromosome 585 chrUn_NT_464788v1 12184 13517 GGXHOI 392 - 12184 13517 0 3 354,358,586, 0,369,747, -,-,-, 610138 Satellite W-chromosome 585 chrUn_NT_464788v1 13913 14849 GGXHOI 356 - 13913 14849 0 2 550,363, 0,573, -,-, 610139 Satellite W-chromosome 585 chrUn_NT_464788v1 15193 18493 GGXHOI 394 - 15193 18493 0 5 486,449,279,1807,171, 0,502,966,1303,3129, -,-,-,-,-, 610141 Satellite W-chromosome 585 chrUn_NT_464788v1 18693 22358 GGXHOI 394 - 18693 22358 0 6 966,390,865,238,399,686, 0,988,1398,2304,2561,2979, -,-,-,-,-,-, 610142 Satellite W-chromosome 585 chrUn_NT_464789v1 10685 22369 GGXHOI 401 - 10685 22369 0 13 357,178,1100,1506,549,525,2603,1305,178,1093,1310,177,484, 0,420,630,1750,3288,3859,4400,7020,8342,8552,9662,10990,11200, -,-,-,-,-,-,-,-,-,-,-,-,-, 610146 Satellite W-chromosome 585 chrUn_NT_464790v1 410 13855 Sat-CR1_GG 170 + 410 13855 0 2 1641,8165, 0,5280, +,+, 610148 Satellite Satellite 585 chrUn_NT_464790v1 2051 5690 GGXHOI 586 + 2051 5690 0 5 68,393,641,393,613, 0,386,1100,2311,3026, +,+,+,+,+, 610149 Satellite W-chromosome 585 chrUn_NT_464790v1 5731 15403 GGXHOI 578 + 5731 15403 0 8 236,393,1269,1499,640,393,641,1919, 0,555,1240,2801,4620,5828,6542,7753, +,+,+,+,+,+,+,+, 610150 Satellite W-chromosome 585 chrUn_NT_464790v1 10031 11559 Sat-CR1_GG 232 + 10031 11559 0 2 320,568, 0,960, +,+, 610154 Satellite Satellite 585 chrUn_NT_464790v1 15447 20803 GGXHOI 552 + 15447 20803 0 5 1854,1236,544,517,246, 0,2174,3450,4562,5110, +,+,+,+,+, 610158 Satellite W-chromosome 585 chrUn_NT_464790v1 21047 21939 GGXHOI 449 + 21047 21939 0 2 281,551, 0,341, +,+, 610161 Satellite W-chromosome 585 chrUn_NT_464791v1 1752 4700 GGXHOI 372 - 1752 4700 0 4 1018,225,773,854, 0,1046,1292,2094, -,-,-,-, 610164 Satellite W-chromosome 585 chrUn_NT_464791v1 6028 8418 GGLTR7-int 821 - 6028 8418 0 3 337,481,584, 0,1325,1806, -,-,-, 610166 LTR ERV1 585 chrUn_NT_464791v1 8418 8955 (CAAGG)n 621 + 8418 8955 0 3 177,116,92, 0,177,445, +,+,+, 610168 Simple_repeat Simple_repeat 585 chrUn_NT_464791v1 10017 10792 (CAAGG)n 558 + 10017 10792 0 2 121,360, 0,415, +,+, 610177 Simple_repeat Simple_repeat 585 chrUn_NT_464791v1 12052 12377 (CCTTG)n 558 + 12052 12377 0 2 83,63, 0,262, +,+, 610185 Simple_repeat Simple_repeat 585 chrUn_NT_464791v1 13004 13415 GGLTR7A 648 - 13004 13415 0 2 334,77, 0,334, -,-, 610191 LTR ERV1 585 chrUn_NT_464791v1 13519 13939 (CCCTAA)n 575 + 13519 13939 0 2 176,191, 0,229, +,+, 610193 Simple_repeat Simple_repeat 585 chrUn_NT_464791v1 14296 15064 (CCCTAA)n 487 + 14296 15064 0 3 194,178,366, 0,207,402, +,+,+, 610196 Simple_repeat Simple_repeat 585 chrUn_NT_464792v1 662 1950 GGXHOI 325 - 662 1950 0 2 1089,179, 0,1109, -,-, 610199 Satellite W-chromosome 585 chrUn_NT_464792v1 6137 9266 GGXHOI 326 - 6137 9266 0 6 398,424,158,457,600,910, 0,426,866,1085,1559,2219, -,-,-,-,-,-, 610207 Satellite W-chromosome 585 chrUn_NT_464792v1 10464 11431 GGXHOI 308 - 10464 11431 0 2 453,457, 0,510, -,-, 610210 Satellite W-chromosome 585 chrUn_NT_464792v1 12282 13529 GGXHOI 322 - 12282 13529 0 2 470,715, 0,532, -,-, 610213 Satellite W-chromosome 585 chrUn_NT_464792v1 15218 16391 GGXHOI 326 - 15218 16391 0 2 757,391, 0,782, -,-, 610215 Satellite W-chromosome 585 chrUn_NT_464792v1 16588 18458 GGXHOI 331 - 16588 18458 0 3 404,471,957, 0,421,913, -,-,-, 610216 Satellite W-chromosome 585 chrUn_NT_464792v1 19010 20104 GGXHOI 313 - 19010 20104 0 3 349,262,404, 0,411,690, -,-,-, 610218 Satellite W-chromosome 585 chrUn_NT_464792v1 20189 21436 GGXHOI 357 - 20189 21436 0 2 223,979, 0,268, -,-, 610219 Satellite W-chromosome 585 chrUn_NT_464793v1 4750 5121 (CTAGGG)n 207 + 4750 5121 0 2 172,180, 0,191, +,+, 610228 Simple_repeat Simple_repeat 585 chrUn_NT_464793v1 5922 6508 (CTAGGG)n 228 + 5922 6508 0 3 175,178,178, 0,192,408, +,+,+, 610230 Simple_repeat Simple_repeat 585 chrUn_NT_464793v1 8454 8778 (CTAGGG)n 264 + 8454 8778 0 2 132,178, 0,146, +,+, 610233 Simple_repeat Simple_repeat 585 chrUn_NT_464793v1 14429 15387 (TTAGGG)n 591 + 14429 15387 0 2 190,741, 0,217, +,+, 610246 Simple_repeat Simple_repeat 585 chrUn_NT_464793v1 18088 18199 (C)n 729 + 18088 18199 0 2 24,51, 0,60, +,+, 610248 Simple_repeat Simple_repeat 585 chrUn_NT_464795v1 2263 2880 CR1-H 380 - 2263 2880 0 2 377,206, 0,411, -,-, 610274 LINE CR1 585 chrUn_NT_464795v1 4753 5375 CR1-H 379 - 4753 5375 0 2 377,209, 0,413, -,-, 610277 LINE CR1 585 chrUn_NT_464795v1 7256 7880 CR1-H 378 - 7256 7880 0 2 379,209, 0,415, -,-, 610280 LINE CR1 585 chrUn_NT_464795v1 9761 10385 CR1-H 378 - 9761 10385 0 2 379,209, 0,415, -,-, 610283 LINE CR1 585 chrUn_NT_464795v1 12266 12890 CR1-H 378 - 12266 12890 0 2 379,209, 0,415, -,-, 610286 LINE CR1 585 chrUn_NT_464795v1 14770 15394 CR1-H 378 - 14770 15394 0 2 379,209, 0,415, -,-, 610289 LINE CR1 585 chrUn_NT_464795v1 17275 17899 CR1-H 378 - 17275 17899 0 2 379,209, 0,415, -,-, 610292 LINE CR1 585 chrUn_NT_464795v1 19780 20402 CR1-H 381 - 19780 20402 0 2 378,208, 0,414, -,-, 610295 LINE CR1 585 chrUn_NT_464796v1 21002 22014 CR1-G 575 + 21002 22014 0 2 596,157, 0,855, +,+, 610302 LINE CR1 585 chrUn_NT_464797v1 2453 3843 GGXHOI 591 + 2453 3843 0 2 154,1224, 0,166, +,+, 610305 Satellite W-chromosome 585 chrUn_NT_464797v1 6765 10077 GGXHOI 575 + 6765 10077 0 2 1568,1731, 0,1581, +,+, 610310 Satellite W-chromosome 585 chrUn_NT_464797v1 10143 10933 GGXHOI 596 + 10143 10933 0 2 360,227, 0,563, +,+, 610311 Satellite W-chromosome 585 chrUn_NT_464797v1 12415 15343 GGXHOI 577 + 12415 15343 0 2 1252,1632, 0,1296, +,+, 610315 Satellite W-chromosome 585 chrUn_NT_464797v1 17037 19804 GGXHOI 587 + 17037 19804 0 2 1010,1743, 0,1024, +,+, 610318 Satellite W-chromosome 585 chrUn_NT_464797v1 19870 20657 GGXHOI 596 + 19870 20657 0 2 313,201, 0,586, +,+, 610319 Satellite W-chromosome 585 chrUn_NT_464798v1 5598 9798 GGXHOI 571 - 5598 9798 0 5 454,379,247,289,528, 0,1317,2537,2826,3672, -,-,-,-,-, 610330 Satellite W-chromosome 585 chrUn_NT_464798v1 9842 14520 GGXHOI 561 - 9842 14520 0 6 1056,32,449,24,373,591, 0,1497,1767,2973,3008,4087, -,-,-,-,-,-, 610335 Satellite W-chromosome 585 chrUn_NT_464798v1 14565 17422 GGXHOI 580 - 14565 17422 0 3 578,242,1208, 0,596,1649, -,-,-, 610341 Satellite W-chromosome 585 chrUn_NT_464798v1 17470 22282 GGXHOI 564 - 17470 22282 0 6 371,447,415,149,731,511, 0,1077,2089,2515,3014,4301, -,-,-,-,-,-, 610344 Satellite W-chromosome 585 chrUn_NT_464799v1 6313 7454 CR1-D 734 + 6313 7454 0 2 328,793, 0,348, +,+, 610354 LINE CR1 585 chrUn_NT_464800v1 1290 3435 GGXHOI 410 + 1290 3435 0 4 723,387,144,833, 0,743,1149,1312, +,+,+,+, 610362 Satellite W-chromosome 585 chrUn_NT_464800v1 3553 5524 GGXHOI 385 + 3553 5524 0 3 404,397,1131, 0,424,840, +,+,+, 610363 Satellite W-chromosome 585 chrUn_NT_464800v1 5868 6467 GGXHOI 344 + 5868 6467 0 2 132,448, 0,151, +,+, 610364 Satellite W-chromosome 585 chrUn_NT_464800v1 6588 7406 GGXHOI 365 + 6588 7406 0 2 405,393, 0,425, +,+, 610365 Satellite W-chromosome 585 chrUn_NT_464800v1 8457 9413 GGXHOI 386 + 8457 9413 0 2 457,440, 0,516, +,+, 610367 Satellite W-chromosome 585 chrUn_NT_464800v1 9501 10920 GGXHOI 401 + 9501 10920 0 3 458,441,441, 0,517,978, +,+,+, 610368 Satellite W-chromosome 585 chrUn_NT_464800v1 11398 16608 GGXHOI 392 + 11398 16608 0 11 441,440,440,440,525,440,440,525,440,440,361, 0,461,921,1381,1841,2425,2885,3345,3929,4389,4849, +,+,+,+,+,+,+,+,+,+,+, 610370 Satellite W-chromosome 585 chrUn_NT_464800v1 16711 18650 GGXHOI 391 + 16711 18650 0 4 440,440,520,441, 0,460,920,1498, +,+,+,+, 610371 Satellite W-chromosome 585 chrUn_NT_464800v1 19129 19992 GGXHOI 387 + 19129 19992 0 2 440,403, 0,460, +,+, 610373 Satellite W-chromosome 585 chrUn_NT_464800v1 20574 21450 GGXHOI 394 + 20574 21450 0 2 456,361, 0,515, +,+, 610375 Satellite W-chromosome 585 chrUn_NT_464801v1 689 2469 GGXHOI 394 - 689 2469 0 5 183,345,665,221,295, 0,195,559,1246,1485, -,-,-,-,-, 610378 Satellite W-chromosome 585 chrUn_NT_464801v1 4282 4540 GGXHOI 329 - 4282 4540 0 2 65,140, 0,118, -,-, 610380 Satellite W-chromosome 585 chrUn_NT_464801v1 5820 11488 GGXHOI 366 - 5820 11488 0 3 889,2012,2701, 0,933,2967, -,-,-, 610383 Satellite W-chromosome 585 chrUn_NT_464801v1 12433 21265 GGXHOI 373 - 12433 21265 0 11 953,152,661,1187,1484,1208,1499,671,263,266,313, 0,968,1133,1818,3024,4520,5746,7262,7956,8237,8519, -,-,-,-,-,-,-,-,-,-,-, 610385 Satellite W-chromosome 585 chrUn_NT_464802v1 5714 7033 GGXHOI 331 - 5714 7033 0 3 513,551,147, 0,576,1172, -,-,-, 610395 Satellite W-chromosome 585 chrUn_NT_464802v1 10347 12804 GGXHOI 381 - 10347 12804 0 3 1050,918,383, 0,1112,2074, -,-,-, 610400 Satellite W-chromosome 585 chrUn_NT_464802v1 16350 17213 GGXHOI 366 - 16350 17213 0 2 413,430, 0,433, -,-, 610406 Satellite W-chromosome 585 chrUn_NT_464802v1 17353 18363 GGXHOI 377 - 17353 18363 0 2 475,472, 0,538, -,-, 610407 Satellite W-chromosome 585 chrUn_NT_464802v1 18462 20087 GGXHOI 381 - 18462 20087 0 2 518,1044, 0,581, -,-, 610408 Satellite W-chromosome 585 chrUn_NT_464802v1 21831 22253 GGXHOI 332 - 21831 22253 0 2 228,172, 0,250, -,-, 610410 Satellite W-chromosome 585 chrUn_NT_464803v1 2319 4816 GGLTR7-int 326 - 2319 4816 0 3 328,345,98, 0,426,2399, -,-,-, 610412 LTR ERV1 585 chrUn_NT_464803v1 6727 7849 CR1-B2 697 - 6727 7849 0 2 894,225, 0,897, -,-, 610417 LINE CR1 585 chrUn_NT_464803v1 13811 14377 CR1-X 461 + 13811 14377 0 3 171,132,221, 0,171,345, +,+,+, 610420 LINE CR1 585 chrUn_NT_464804v1 4707 7553 GGERVL-B-int 715 - 4707 7553 0 2 917,1929, 0,917, -,-, 610427 LTR ERVL 585 chrUn_NT_464804v1 10084 10467 (CAAGG)n 573 + 10084 10467 0 2 182,201, 0,182, +,+, 610432 Simple_repeat Simple_repeat 585 chrUn_NT_464804v1 11142 11597 (CAGGC)n 687 + 11142 11597 0 3 25,215,179, 0,25,276, +,+,+, 610438 Simple_repeat Simple_repeat 585 chrUn_NT_464804v1 11891 12356 (CAGGC)n 486 + 11891 12356 0 2 80,210, 0,255, +,+, 610442 Simple_repeat Simple_repeat 585 chrUn_NT_464804v1 12632 13318 (CAAGG)n 610 + 12632 13318 0 2 164,170, 0,516, +,+, 610446 Simple_repeat Simple_repeat 585 chrUn_NT_464805v1 5038 9339 GGXHOI 366 - 5038 9339 0 4 560,1785,1690,162, 0,591,2425,4139, -,-,-,-, 610457 Satellite W-chromosome 585 chrUn_NT_464805v1 9436 10444 GGXHOI 386 - 9436 10444 0 2 142,848, 0,160, -,-, 610458 Satellite W-chromosome 585 chrUn_NT_464805v1 10663 22242 GGXHOI 379 - 10663 22242 0 13 1489,742,3291,834,333,685,547,702,388,504,1100,183,454, 0,1512,2269,5578,6453,6798,7506,8068,8794,9232,9753,10904,11125, -,-,-,-,-,-,-,-,-,-,-,-,-, 610459 Satellite W-chromosome 585 chrUn_NT_464807v1 3529 3852 GGXHOI 385 - 3529 3852 0 2 145,137, 0,186, -,-, 610464 Satellite W-chromosome 585 chrUn_NT_464807v1 4636 7128 GGXHOI 353 - 4636 7128 0 9 449,262,377,196,279,303,176,136,93, 0,506,820,1212,1423,1716,2032,2246,2399, -,-,-,-,-,-,-,-,-, 610466 Satellite W-chromosome 585 chrUn_NT_464807v1 7217 9784 GGXHOI 400 - 7217 9784 0 6 139,608,375,181,344,794, 0,178,801,1224,1418,1773, -,-,-,-,-,-, 610467 Satellite W-chromosome 585 chrUn_NT_464807v1 9983 11174 GGXHOI 367 - 9983 11174 0 3 126,371,593, 0,174,598, -,-,-, 610468 Satellite W-chromosome 585 chrUn_NT_464807v1 11338 12647 GGXHOI 324 - 11338 12647 0 2 1049,230, 0,1079, -,-, 610469 Satellite W-chromosome 585 chrUn_NT_464807v1 12736 14799 GGXHOI 298 - 12736 14799 0 7 123,163,127,711,136,127,581, 0,140,318,460,1186,1340,1482, -,-,-,-,-,-,-, 610470 Satellite W-chromosome 585 chrUn_NT_464807v1 14875 17606 GGXHOI 352 - 14875 17606 0 5 208,452,1187,641,180, 0,227,694,1894,2551, -,-,-,-,-, 610471 Satellite W-chromosome 585 chrUn_NT_464807v1 18095 19988 GGXHOI 367 - 18095 19988 0 6 184,695,383,145,228,132, 0,223,930,1330,1495,1761, -,-,-,-,-,-, 610473 Satellite W-chromosome 585 chrUn_NT_464807v1 20170 20944 GGXHOI 387 - 20170 20944 0 3 257,315,139, 0,288,635, -,-,-, 610474 Satellite W-chromosome 585 chrUn_NT_464807v1 21034 22230 GGXHOI 396 - 21034 22230 0 3 308,523,297, 0,359,899, -,-,-, 610475 Satellite W-chromosome 585 chrUn_NT_464808v1 8306 10723 GGLTR3F1 820 + 8306 10723 0 3 231,83,1930, 0,402,487, +,+,+, 610485 LTR ERVL 585 chrUn_NT_464809v1 2505 13684 GGLTR7-int 520 - 2505 13684 0 7 489,352,259,214,962,1122,558, 0,1383,1735,2016,7438,8400,10621, -,-,-,-,-,-,-, 610500 LTR ERV1 585 chrUn_NT_464809v1 4970 8638 GGERV28_I-int 111 - 4970 8638 0 3 1962,396,775, 0,2283,2893, -,-,-, 610501 LTR ERVK 585 chrUn_NT_464809v1 15313 17068 GGLTR7A 844 - 15313 17068 0 2 607,1147, 0,608, -,-, 610508 LTR ERV1 585 chrUn_NT_464809v1 17068 22204 GGLTR3A 800 + 17068 22204 0 2 521,4615, 0,521, +,+, 610509 LTR ERVL 585 chrUn_NT_464810v1 1423 3384 GGXHOI 411 + 1423 3384 0 3 496,307,1120, 0,517,841, +,+,+, 610512 Satellite W-chromosome 585 chrUn_NT_464810v1 3410 5702 GGXHOI 403 + 3410 5702 0 4 413,326,268,1237, 0,431,776,1055, +,+,+,+, 610514 Satellite W-chromosome 585 chrUn_NT_464810v1 5727 6852 GGXHOI 411 + 5727 6852 0 2 414,692, 0,433, +,+, 610516 Satellite W-chromosome 585 chrUn_NT_464810v1 7734 8859 GGXHOI 411 + 7734 8859 0 2 414,692, 0,433, +,+, 610520 Satellite W-chromosome 585 chrUn_NT_464810v1 8893 10552 GGXHOI 419 + 8893 10552 0 3 822,421,382, 0,838,1277, +,+,+, 610522 Satellite W-chromosome 585 chrUn_NT_464810v1 12603 13425 GGXHOI 411 - 12603 13425 0 2 307,494, 0,328, -,-, 610528 Satellite W-chromosome 585 chrUn_NT_464810v1 15466 16610 GGXHOI 396 - 15466 16610 0 2 696,429, 0,715, -,-, 610535 Satellite W-chromosome 585 chrUn_NT_464810v1 18487 19319 GGXHOI 407 - 18487 19319 0 2 351,444, 0,388, -,-, 610541 Satellite W-chromosome 585 chrUn_NT_464810v1 20065 21098 GGXHOI 391 - 20065 21098 0 4 422,98,192,268, 0,438,552,765, -,-,-,-, 610544 Satellite W-chromosome 585 chrUn_NT_464810v1 21256 22132 GGXHOI 429 - 21256 22132 0 2 613,244, 0,632, -,-, 610546 Satellite W-chromosome 585 chrUn_NT_464812v1 2725 4168 (CGAGG)n 540 + 2725 4168 0 2 1244,20, 0,1423, +,+, 610559 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 4306 5140 (CGAGG)n 525 + 4306 5140 0 3 420,122,107, 0,428,727, +,+,+, 610562 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 5301 5678 (CGAGG)n 535 + 5301 5678 0 2 178,179, 0,198, +,+, 610565 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 5783 7409 (CGAGG)n 554 + 5783 7409 0 5 344,380,195,117,184, 0,524,929,1275,1442, +,+,+,+,+, 610567 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 8425 9088 (CGAGG)n 525 + 8425 9088 0 2 321,283, 0,380, +,+, 610574 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 9318 9678 (CGAGG)n 502 + 9318 9678 0 2 133,43, 0,317, +,+, 610576 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 12169 12670 (CGAGG)n 550 + 12169 12670 0 2 298,177, 0,324, +,+, 610588 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 12754 13694 (CGAGG)n 539 + 12754 13694 0 3 183,424,308, 0,183,632, +,+,+, 610590 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 14172 16189 (CGAGG)n 508 + 14172 16189 0 2 1705,297, 0,1720, +,+, 610594 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 16428 19558 (CGAGG)n 522 + 16428 19558 0 5 1373,192,343,503,426, 0,1557,1800,2188,2704, +,+,+,+,+, 610597 Simple_repeat Simple_repeat 585 chrUn_NT_464812v1 19687 21782 (CGAGG)n 504 + 19687 21782 0 5 183,810,236,366,348, 0,218,1079,1370,1747, +,+,+,+,+, 610600 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 1007 1475 (CCTTG)n 408 + 1007 1475 0 2 15,429, 0,39, +,+, 610610 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 1828 2280 (CAAGG)n 540 + 1828 2280 0 2 223,229, 0,223, +,+, 610612 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 2341 2730 (CCTTG)n 582 + 2341 2730 0 2 201,188, 0,201, +,+, 610613 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 2757 3393 (CCTTG)n 481 + 2757 3393 0 2 180,429, 0,207, +,+, 610615 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 3746 4197 (CAAGG)n 540 + 3746 4197 0 2 223,228, 0,223, +,+, 610617 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 4258 4646 (CCTTG)n 575 + 4258 4646 0 2 200,188, 0,200, +,+, 610618 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 4673 5309 (CCTTG)n 481 + 4673 5309 0 2 180,429, 0,207, +,+, 610620 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 5662 6113 (CAAGG)n 540 + 5662 6113 0 2 223,228, 0,223, +,+, 610622 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 6174 6563 (CCTTG)n 582 + 6174 6563 0 2 201,188, 0,201, +,+, 610623 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 7289 7617 (CAGGC)n 343 + 7289 7617 0 2 227,40, 0,288, +,+, 610627 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 8110 8993 (CCTTG)n 497 + 8110 8993 0 3 220,454,169, 0,247,714, +,+,+, 610631 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 9171 9535 (CAAGG)n 408 + 9171 9535 0 2 75,262, 0,102, +,+, 610633 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 9638 10390 (CAAGG)n 488 + 9638 10390 0 2 136,443, 0,309, +,+, 610635 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 10438 11350 (CCTTG)n 496 + 10438 11350 0 3 464,80,169, 0,650,743, +,+,+, 610637 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 11892 12999 (CAAGG)n 486 + 11892 12999 0 4 372,213,130,25, 0,372,613,1082, +,+,+,+, 610641 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 13018 13804 (CCTTG)n 535 + 13018 13804 0 3 253,239,201, 0,301,585, +,+,+, 610644 Simple_repeat Simple_repeat 585 chrUn_NT_464813v1 14864 22139 GGXHOI 382 - 14864 22139 0 4 1050,1008,2569,2594, 0,1068,2094,4681, -,-,-,-, 610648 Satellite W-chromosome 585 chrUn_NT_464814v1 9130 9791 GGLTR11-int 503 + 9130 9791 0 2 125,224, 0,437, +,+, 610656 LTR ERV1 585 chrUn_NT_464815v1 12545 12870 GGERV10_LTR 618 + 12545 12870 0 2 74,160, 0,165, +,+, 610678 LTR ERVL 585 chrUn_NT_464815v1 19710 20807 CR1-Y2_Aves 250 + 19710 20807 0 2 493,562, 0,535, +,+, 610684 LINE CR1 585 chrUn_NT_464816v1 8773 13401 CR1-Y2_Aves 239 + 8773 13401 0 3 322,565,599, 0,331,4029, +,+,+, 610695 LINE CR1 585 chrUn_NT_464817v1 1085 5140 GGXHOI 484 - 1085 5140 0 4 1493,1279,126,824, 0,1741,3046,3231, -,-,-,-, 610706 Satellite W-chromosome 585 chrUn_NT_464817v1 4430 10125 Sat-CR1_GG 172 - 4430 10125 0 2 772,702, 0,4993, -,-, 610707 Satellite Satellite 585 chrUn_NT_464817v1 5202 9423 GGXHOI 576 - 5202 9423 0 3 2298,453,970, 0,2549,3251, -,-,-, 610708 Satellite W-chromosome 585 chrUn_NT_464817v1 9466 12373 GGXHOI 562 - 9466 12373 0 2 985,1600, 0,1307, -,-, 610709 Satellite W-chromosome 585 chrUn_NT_464817v1 12434 15855 GGXHOI 556 - 12434 15855 0 3 115,334,761, 0,1761,2660, -,-,-, 610712 Satellite W-chromosome 585 chrUn_NT_464817v1 16832 18587 GGXHOI 558 - 16832 18587 0 2 349,74, 0,1681, -,-, 610718 Satellite W-chromosome 585 chrUn_NT_464817v1 18536 19371 Sat-CR1_GG 170 - 18536 19371 0 2 71,31, 0,804, -,-, 610720 Satellite Satellite 585 chrUn_NT_464817v1 19437 22138 GGXHOI 520 - 19437 22138 0 4 422,420,165,418, 0,760,1539,2283, -,-,-,-, 610722 Satellite W-chromosome 585 chrUn_NT_464819v1 16713 18575 GGERVL-B-int 713 - 16713 18575 0 4 244,512,389,192, 0,244,1281,1670, -,-,-,-, 610750 LTR ERVL 585 chrUn_NT_464819v1 20585 22131 GGLTR7-int 879 + 20585 22131 0 3 615,675,220, 0,615,1326, +,+,+, 610753 LTR ERV1 585 chrUn_NT_464820v1 7355 7978 CR1-H 678 - 7355 7978 0 2 139,478, 0,145, -,-, 610760 LINE CR1 585 chrUn_NT_464820v1 10190 11461 CR1-H 587 - 10190 11461 0 2 116,1155, 0,116, -,-, 610765 LINE CR1 585 chrUn_NT_464820v1 16419 16529 (TTTGC)n 308 + 16419 16529 0 2 61,9, 0,101, +,+, 610768 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 1318 1966 (CGAGG)n 554 + 1318 1966 0 2 242,395, 0,253, +,+, 610778 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 2056 2701 (CGAGG)n 508 + 2056 2701 0 2 376,92, 0,553, +,+, 610780 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 3794 5242 (CGAGG)n 520 + 3794 5242 0 4 441,295,187,321, 0,619,940,1127, +,+,+,+, 610787 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 6229 6792 (CGAGG)n 554 + 6229 6792 0 2 312,75, 0,488, +,+, 610798 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 7175 8959 (CGAGG)n 555 + 7175 8959 0 4 178,285,121,779, 0,205,501,1005, +,+,+,+, 610802 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 9281 10995 (CGAGG)n 545 + 9281 10995 0 4 388,566,232,124, 0,410,1010,1590, +,+,+,+, 610808 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 13696 14448 (CGAGG)n 579 + 13696 14448 0 2 262,490, 0,262, +,+, 610825 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 15440 16106 (CGAGG)n 575 + 15440 16106 0 3 149,24,291, 0,333,375, +,+,+, 610832 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 16106 18225 (CCTCG)n 568 + 16106 18225 0 2 503,1616, 0,503, +,+, 610834 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 18190 18686 (CCTTG)n 480 + 18190 18686 0 3 97,11,24, 0,281,472, +,+,+, 610835 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 18482 19850 (CCTCG)n 648 + 18482 19850 0 6 180,208,187,193,218,203, 0,180,567,754,947,1165, +,+,+,+,+,+, 610837 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 20241 20572 (CCTTG)n 518 + 20241 20572 0 2 89,52, 0,279, +,+, 610841 Simple_repeat Simple_repeat 585 chrUn_NT_464821v1 20802 22067 GGLTR10D-int 895 + 20802 22067 0 2 1018,194, 0,1071, +,+, 610845 LTR ERVK 585 chrUn_NT_464823v1 1925 2381 CR1-H 672 - 1925 2381 0 2 162,294, 0,162, -,-, 610878 LINE CR1 585 chrUn_NT_464823v1 13896 14523 CR1-H 686 - 13896 14523 0 2 139,469, 0,158, -,-, 610889 LINE CR1 585 chrUn_NT_464823v1 16569 17024 CR1-H 669 - 16569 17024 0 2 162,293, 0,162, -,-, 610894 LINE CR1 585 chrUn_NT_464824v1 1553 14220 GGXHOI 433 + 1553 14220 0 2 1701,10951, 0,1716, +,+, 610904 Satellite W-chromosome 585 chrUn_NT_464824v1 14335 21609 GGXHOI 413 + 14335 21609 0 3 2333,1297,3612, 0,2350,3662, +,+,+, 610905 Satellite W-chromosome 585 chrUn_NT_464825v1 4781 7878 CR1-D2 548 + 4781 7878 0 2 463,120, 0,2977, +,+, 610908 LINE CR1 585 chrUn_NT_464825v1 14534 15663 CR1-D 723 - 14534 15663 0 2 783,327, 0,802, -,-, 610912 LINE CR1 585 chrUn_NT_464826v1 4335 5870 GGXHOI 600 - 4335 5870 0 4 247,147,122,407, 0,258,963,1128, -,-,-,-, 610922 Satellite W-chromosome 585 chrUn_NT_464826v1 6595 9427 GGXHOI 586 - 6595 9427 0 4 197,435,48,901, 0,957,1831,1931, -,-,-,-, 610925 Satellite W-chromosome 585 chrUn_NT_464826v1 9723 14663 GGXHOI 589 - 9723 14663 0 6 1258,234,25,166,241,896, 0,1993,2238,2932,3139,4044, -,-,-,-,-,-, 610931 Satellite W-chromosome 585 chrUn_NT_464826v1 14678 16569 GGXHOI 588 - 14678 16569 0 4 618,147,119,398, 0,629,1332,1493, -,-,-,-, 610936 Satellite W-chromosome 585 chrUn_NT_464826v1 17287 20671 GGXHOI 595 - 17287 20671 0 6 405,249,122,247,144,193, 0,1072,2078,2242,2500,3191, -,-,-,-,-,-, 610939 Satellite W-chromosome 585 chrUn_NT_464827v1 4401 6316 Sat-CR1_GG 162 - 4401 6316 0 2 874,153, 0,1762, -,-, 610954 Satellite Satellite 585 chrUn_NT_464827v1 6205 7359 GGXHOI 564 - 6205 7359 0 2 229,694, 0,460, -,-, 610956 Satellite W-chromosome 585 chrUn_NT_464827v1 7402 9733 GGXHOI 566 - 7402 9733 0 2 239,1659, 0,672, -,-, 610959 Satellite W-chromosome 585 chrUn_NT_464827v1 9768 14060 GGXHOI 549 - 9768 14060 0 4 476,317,282,655, 0,2692,3343,3637, -,-,-,-, 610962 Satellite W-chromosome 585 chrUn_NT_464827v1 15031 17539 GGXHOI 544 - 15031 17539 0 2 959,809, 0,1699, -,-, 610968 Satellite W-chromosome 585 chrUn_NT_464827v1 17153 19216 Sat-CR1_GG 158 - 17153 19216 0 3 429,59,403, 0,1054,1660, -,-,-, 610970 Satellite Satellite 585 chrUn_NT_464827v1 18825 22036 GGXHOI 560 - 18825 22036 0 4 758,109,134,202, 0,1123,1970,3009, -,-,-,-, 610973 Satellite W-chromosome 585 chrUn_NT_464828v1 686 1531 GGXHOI 294 - 686 1531 0 2 176,611, 0,234, -,-, 610979 Satellite W-chromosome 585 chrUn_NT_464828v1 1861 16283 GGXHOI 396 - 1861 16283 0 5 718,1798,3713,1443,6679, 0,740,2556,6284,7743, -,-,-,-,-, 610980 Satellite W-chromosome 585 chrUn_NT_464828v1 18017 20088 (TTAGGG)n 626 + 18017 20088 0 8 238,172,187,183,108,103,51,495, 0,262,470,687,1124,1250,1525,1576, +,+,+,+,+,+,+,+, 610983 Simple_repeat Simple_repeat 585 chrUn_NT_464828v1 19693 20414 (CTAGGG)n 456 + 19693 20414 0 2 411,125, 0,596, +,+, 610986 Simple_repeat Simple_repeat 585 chrUn_NT_464828v1 20397 22031 (TTAGGG)n 668 + 20397 22031 0 5 339,177,174,218,482, 0,358,553,751,1152, +,+,+,+,+, 610988 Simple_repeat Simple_repeat 585 chrUn_NT_464830v1 2495 2924 GGLTR7A 868 - 2495 2924 0 2 254,175, 0,254, -,-, 610998 LTR ERV1 585 chrUn_NT_464830v1 4455 4997 (CAAGG)n 572 + 4455 4997 0 2 270,62, 0,480, +,+, 611006 Simple_repeat Simple_repeat 585 chrUn_NT_464830v1 14801 15849 GGLTR7-int 332 - 14801 15849 0 3 141,232,101, 0,689,947, -,-,-, 611021 LTR ERV1 585 chrUn_NT_464830v1 16506 18864 GGERVL-B-int 678 - 16506 18864 0 2 1692,210, 0,2148, -,-, 611022 LTR ERVL 585 chrUn_NT_464830v1 20893 21455 (CAGGC)n 530 + 20893 21455 0 2 130,237, 0,325, +,+, 611026 Simple_repeat Simple_repeat 585 chrUn_NT_464831v1 376 1529 GGXHOI 519 - 376 1529 0 3 239,31,605, 0,457,548, -,-,-, 611034 Satellite W-chromosome 585 chrUn_NT_464831v1 1653 5537 GGXHOI 540 - 1653 5537 0 6 372,193,238,194,255,159, 0,695,1329,1890,2531,3725, -,-,-,-,-,-, 611036 Satellite W-chromosome 585 chrUn_NT_464831v1 5613 19102 GGXHOI 537 - 5613 19102 0 23 18,192,305,195,298,221,246,195,248,223,244,194,297,194,247,194,246,194,247,193,246,286,740, 0,330,917,1530,2122,2715,3383,3953,4598,5141,5811,6377,6968,7588,8228,8798,9439,10008,10649,11219,11858,12426,12749, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 611042 Satellite W-chromosome 585 chrUn_NT_464831v1 20076 21148 GGXHOI 474 - 20076 21148 0 2 17,718, 0,354, -,-, 611066 Satellite W-chromosome 585 chrUn_NT_464831v1 21223 21997 GGXHOI 586 - 21223 21997 0 2 36,35, 0,739, -,-, 611068 Satellite W-chromosome 585 chrUn_NT_464832v1 10289 11095 G-rich 324 + 10289 11095 0 2 417,334, 0,472, +,+, 611082 Low_complexity Low_complexity 585 chrUn_NT_464832v1 13811 16267 GGLTR7-int 612 + 13811 16267 0 2 332,794, 0,1662, +,+, 611087 LTR ERV1 585 chrUn_NT_464832v1 16279 18700 GGERV10_LTR 848 - 16279 18700 0 2 38,41, 0,2380, -,-, 611090 LTR ERVL 585 chrUn_NT_464832v1 16446 18658 GGLTR10D-int 940 - 16446 18658 0 2 362,1847, 0,365, -,-, 611091 LTR ERVK 585 chrUn_NT_464832v1 19576 20098 (CGAGG)n 471 + 19576 20098 0 2 191,300, 0,222, +,+, 611094 Simple_repeat Simple_repeat 585 chrUn_NT_464832v1 20118 21203 (CGAGG)n 527 + 20118 21203 0 3 615,26,253, 0,794,832, +,+,+, 611096 Simple_repeat Simple_repeat 585 chrUn_NT_464833v1 1764 2348 GGXHOI 341 - 1764 2348 0 2 143,387, 0,197, -,-, 611101 Satellite W-chromosome 585 chrUn_NT_464833v1 3583 4531 GGXHOI 388 - 3583 4531 0 2 518,411, 0,537, -,-, 611104 Satellite W-chromosome 585 chrUn_NT_464833v1 4614 5595 GGXHOI 359 - 4614 5595 0 2 339,614, 0,367, -,-, 611105 Satellite W-chromosome 585 chrUn_NT_464833v1 5682 6666 GGXHOI 392 - 5682 6666 0 4 340,192,149,244, 0,365,576,740, -,-,-,-, 611106 Satellite W-chromosome 585 chrUn_NT_464833v1 6748 7729 GGXHOI 399 - 6748 7729 0 3 478,146,334, 0,490,647, -,-,-, 611107 Satellite W-chromosome 585 chrUn_NT_464833v1 7812 8790 GGXHOI 369 - 7812 8790 0 2 561,398, 0,580, -,-, 611108 Satellite W-chromosome 585 chrUn_NT_464833v1 8871 9675 GGXHOI 410 - 8871 9675 0 2 642,148, 0,656, -,-, 611109 Satellite W-chromosome 585 chrUn_NT_464833v1 9935 14049 GGXHOI 393 - 9935 14049 0 7 585,768,235,598,311,1139,335, 0,598,1392,1647,2297,2627,3779, -,-,-,-,-,-,-, 611110 Satellite W-chromosome 585 chrUn_NT_464833v1 16372 16825 GGXHOI 397 - 16372 16825 0 2 146,292, 0,161, -,-, 611112 Satellite W-chromosome 585 chrUn_NT_464833v1 16909 19778 GGXHOI 411 - 16909 19778 0 5 740,871,147,894,148, 0,755,1645,1807,2721, -,-,-,-,-, 611113 Satellite W-chromosome 585 chrUn_NT_464834v1 10346 12752 GGLTR3F1 751 - 10346 12752 0 2 1909,494, 0,1912, -,-, 611121 LTR ERVL 585 chrUn_NT_464835v1 2906 5499 GGXHOI 418 - 2906 5499 0 4 836,84,146,1481, 0,851,950,1112, -,-,-,-, 611130 Satellite W-chromosome 585 chrUn_NT_464835v1 7170 13403 GGXHOI 419 - 7170 13403 0 7 312,185,394,165,1552,1052,2435, 0,329,550,973,1163,2730,3798, -,-,-,-,-,-,-, 611133 Satellite W-chromosome 585 chrUn_NT_464835v1 13622 14734 GGXHOI 395 - 13622 14734 0 3 345,185,496, 0,400,616, -,-,-, 611134 Satellite W-chromosome 585 chrUn_NT_464835v1 15920 17316 GGXHOI 385 - 15920 17316 0 2 418,964, 0,432, -,-, 611136 Satellite W-chromosome 585 chrUn_NT_464835v1 20151 21996 GGXHOI 422 - 20151 21996 0 5 797,135,166,381,308, 0,813,959,1140,1537, -,-,-,-,-, 611139 Satellite W-chromosome 585 chrUn_NT_464836v1 2110 8725 GGXHOI 551 - 2110 8725 0 13 300,290,300,290,300,290,300,290,308,290,125,69,203, 0,551,1172,1723,2344,2895,3516,4067,4680,5239,5853,6024,6412, -,-,-,-,-,-,-,-,-,-,-,-,-, 611144 Satellite W-chromosome 585 chrUn_NT_464836v1 9136 12243 GGXHOI 554 - 9136 12243 0 6 308,290,300,290,300,203, 0,559,1180,1731,2352,2904, -,-,-,-,-,-, 611157 Satellite W-chromosome 585 chrUn_NT_464836v1 12654 17161 GGXHOI 529 - 12654 17161 0 9 308,290,125,69,290,231,289,306,435, 0,559,1173,1344,1733,2354,2904,3515,4072, -,-,-,-,-,-,-,-,-, 611164 Satellite W-chromosome 585 chrUn_NT_464836v1 17270 18337 GGXHOI 508 - 17270 18337 0 2 348,485, 0,582, -,-, 611172 Satellite W-chromosome 585 chrUn_NT_464836v1 20465 21098 GGXHOI 575 - 20465 21098 0 3 127,283,168, 0,158,465, -,-,-, 611179 Satellite W-chromosome 585 chrUn_NT_464836v1 21199 21540 GGXHOI 504 - 21199 21540 0 2 131,194, 0,147, -,-, 611180 Satellite W-chromosome 585 chrUn_NT_464837v1 1900 3112 GGXHOI 390 - 1900 3112 0 2 694,496, 0,716, -,-, 611186 Satellite W-chromosome 585 chrUn_NT_464837v1 3861 4800 GGXHOI 360 - 3861 4800 0 2 730,188, 0,751, -,-, 611189 Satellite W-chromosome 585 chrUn_NT_464837v1 5783 6950 GGXHOI 388 - 5783 6950 0 2 729,416, 0,751, -,-, 611193 Satellite W-chromosome 585 chrUn_NT_464837v1 7693 8858 GGXHOI 388 - 7693 8858 0 2 731,412, 0,753, -,-, 611196 Satellite W-chromosome 585 chrUn_NT_464837v1 8891 10786 GGXHOI 389 - 8891 10786 0 3 1437,211,191, 0,1459,1704, -,-,-, 611198 Satellite W-chromosome 585 chrUn_NT_464837v1 10819 12676 GGXHOI 393 - 10819 12676 0 2 1433,404, 0,1453, -,-, 611200 Satellite W-chromosome 585 chrUn_NT_464837v1 14588 17927 GGXHOI 362 - 14588 17927 0 2 2125,1165, 0,2174, -,-, 611205 Satellite W-chromosome 585 chrUn_NT_464839v1 11063 13651 GGXHOI 600 + 11063 13651 0 4 29,407,148,779, 0,517,1650,1809, +,+,+,+, 611234 Satellite W-chromosome 585 chrUn_NT_464839v1 13699 21946 GGXHOI 595 + 13699 21946 0 11 130,148,299,148,299,148,299,407,407,407,878, 0,576,735,1708,1867,2840,2999,3973,5105,6237,7369, +,+,+,+,+,+,+,+,+,+,+, 611238 Satellite W-chromosome 585 chrUn_NT_464840v1 15408 17706 CR1-F 867 - 15408 17706 0 3 459,697,1141, 0,460,1157, -,-,-, 611261 LINE CR1 585 chrUn_NT_464841v1 3236 4274 CR1-B2 710 - 3236 4274 0 3 529,271,225, 0,539,813, -,-,-, 611268 LINE CR1 585 chrUn_NT_464841v1 9315 9624 CR1-X 532 + 9315 9624 0 3 171,78,57, 0,171,252, +,+,+, 611270 LINE CR1 585 chrUn_NT_464841v1 14976 16100 CR1-B2 705 + 14976 16100 0 2 226,895, 0,229, +,+, 611273 LINE CR1 585 chrUn_NT_464842v1 5114 20040 GGXHOI 395 + 5114 20040 0 6 1775,4041,2417,1846,3001,1754, 0,1792,5850,8290,10153,13172, +,+,+,+,+,+, 611282 Satellite W-chromosome 585 chrUn_NT_464842v1 20312 21893 GGXHOI 355 + 20312 21893 0 3 771,627,128, 0,787,1453, +,+,+, 611283 Satellite W-chromosome 585 chrUn_NT_464843v1 14781 17251 GGLTR7-int 583 + 14781 17251 0 3 356,849,791, 0,822,1679, +,+,+, 611296 LTR ERV1 585 chrUn_NT_464843v1 17263 19689 GGERV10_LTR 874 - 17263 19689 0 2 38,41, 0,2385, -,-, 611298 LTR ERVL 585 chrUn_NT_464843v1 17430 19647 GGLTR10D-int 908 - 17430 19647 0 2 366,1845, 0,372, -,-, 611299 LTR ERVK 585 chrUn_NT_464843v1 19735 20695 (CGAGG)n 573 + 19735 20695 0 3 401,93,266, 0,578,694, +,+,+, 611300 Simple_repeat Simple_repeat 585 chrUn_NT_464843v1 21066 21542 (CGAGG)n 524 + 21066 21542 0 2 192,104, 0,372, +,+, 611305 Simple_repeat Simple_repeat 585 chrUn_NT_464844v1 3424 3882 CR1-F 456 + 3424 3882 0 2 191,207, 0,251, +,+, 611314 LINE CR1 585 chrUn_NT_464844v1 3923 5340 CR1-F 488 + 3923 5340 0 5 200,205,201,155,83, 0,243,489,957,1334, +,+,+,+,+, 611315 LINE CR1 585 chrUn_NT_464844v1 5386 15442 CR1-F 530 + 5386 15442 0 27 195,179,150,210,198,203,204,204,155,202,181,154,204,204,156,201,201,204,204,205,155,202,179,153,202,203,179, 0,472,694,1144,1633,2129,2376,2622,3092,3536,4016,4241,4685,4931,5402,5848,6328,6829,7075,7321,7792,8238,8719,8942,9388,9632,9877, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 611317 LINE CR1 585 chrUn_NT_464844v1 15486 17371 CR1-F 584 + 15486 17371 0 7 179,192,201,206,205,205,183, 0,222,458,959,1206,1455,1702, +,+,+,+,+,+,+, 611334 LINE CR1 585 chrUn_NT_464844v1 17415 19281 CR1-F 542 + 17415 19281 0 7 154,187,203,202,211,210,181, 0,199,428,931,1175,1432,1685, +,+,+,+,+,+,+, 611336 LINE CR1 585 chrUn_NT_464844v1 19325 21841 CR1-F 550 + 19325 21841 0 7 177,196,203,200,214,157,105, 0,223,461,970,1464,1954,2411, +,+,+,+,+,+,+, 611338 LINE CR1 585 chrUn_NT_464845v1 6705 8251 GGXHOI 398 - 6705 8251 0 4 252,556,227,464, 0,268,843,1082, -,-,-,-, 611345 Satellite W-chromosome 585 chrUn_NT_464845v1 8347 9808 GGXHOI 414 - 8347 9808 0 3 212,391,829, 0,224,632, -,-,-, 611346 Satellite W-chromosome 585 chrUn_NT_464845v1 9914 21887 GGXHOI 384 - 9914 21887 0 15 461,384,906,377,536,595,139,2083,212,877,1012,228,1179,783,1847, 0,475,875,1832,2231,2783,3436,3591,5722,5955,6849,7873,8123,9321,10126, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 611347 Satellite W-chromosome 585 chrUn_NT_464846v1 2549 3172 CR1-H 372 + 2549 3172 0 2 208,379, 0,244, +,+, 611351 LINE CR1 585 chrUn_NT_464846v1 5051 5674 CR1-H 372 + 5051 5674 0 2 208,379, 0,244, +,+, 611354 LINE CR1 585 chrUn_NT_464846v1 7554 8178 CR1-H 378 + 7554 8178 0 2 209,379, 0,245, +,+, 611357 LINE CR1 585 chrUn_NT_464846v1 10058 10681 CR1-H 372 + 10058 10681 0 2 208,379, 0,244, +,+, 611360 LINE CR1 585 chrUn_NT_464846v1 12562 13186 CR1-H 378 + 12562 13186 0 2 209,379, 0,245, +,+, 611363 LINE CR1 585 chrUn_NT_464846v1 15066 15690 CR1-H 378 + 15066 15690 0 2 209,379, 0,245, +,+, 611366 LINE CR1 585 chrUn_NT_464846v1 17570 18194 CR1-H 378 + 17570 18194 0 2 209,379, 0,245, +,+, 611369 LINE CR1 585 chrUn_NT_464846v1 20056 20596 CR1-H 479 + 20056 20596 0 3 206,106,53, 0,242,487, +,+,+, 611372 LINE CR1 585 chrUn_NT_464847v1 5078 6831 GGERVL-A-int 734 + 5078 6831 0 2 452,1301, 0,452, +,+, 611377 LTR ERVL 585 chrUn_NT_464848v1 492 1752 (CGAGG)n 517 + 492 1752 0 3 306,26,700, 0,485,560, +,+,+, 611393 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 1789 2727 (CGAGG)n 564 + 1789 2727 0 3 327,213,375, 0,338,563, +,+,+, 611397 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 2876 4137 (CGAGG)n 583 + 2876 4137 0 5 182,285,184,239,224, 0,182,467,798,1037, +,+,+,+,+, 611399 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 4179 4934 (CGAGG)n 556 + 4179 4934 0 2 327,238, 0,517, +,+, 611402 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 4708 5100 (CAAGG)n 420 + 4708 5100 0 2 65,142, 0,250, +,+, 611404 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 5411 6409 (CGAGG)n 546 + 5411 6409 0 3 68,11,555, 0,251,443, +,+,+, 611408 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 6422 6796 (CGAGG)n 624 + 6422 6796 0 2 184,190, 0,184, +,+, 611412 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 6855 7976 (CGAGG)n 575 + 6855 7976 0 3 359,264,193, 0,359,928, +,+,+, 611414 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 8057 8925 (CGAGG)n 548 + 8057 8925 0 3 183,236,250, 0,204,618, +,+,+, 611418 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 9024 9736 (CGAGG)n 544 + 9024 9736 0 2 449,80, 0,632, +,+, 611421 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 10171 10494 (CAAGG)n 450 + 10171 10494 0 2 116,26, 0,297, +,+, 611427 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 10739 11097 (CAAGG)n 470 + 10739 11097 0 2 138,30, 0,328, +,+, 611430 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 10877 11343 (CGAGG)n 615 + 10877 11343 0 2 190,276, 0,190, +,+, 611431 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 12664 14407 (CGAGG)n 556 + 12664 14407 0 4 541,23,387,407, 0,721,926,1336, +,+,+,+, 611438 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 14473 14948 (CGAGG)n 511 + 14473 14948 0 2 191,284, 0,191, +,+, 611442 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 15658 17295 (CGAGG)n 542 + 15658 17295 0 4 361,323,504,412, 0,398,721,1225, +,+,+,+, 611446 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 17376 17940 (CGAGG)n 572 + 17376 17940 0 2 184,349, 0,215, +,+, 611448 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 17891 19677 (CGAGG)n 596 + 17891 19677 0 7 243,237,288,29,219,183,178, 0,257,658,1126,1155,1396,1608, +,+,+,+,+,+,+, 611450 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 19716 20669 (CGAGG)n 548 + 19716 20669 0 3 140,300,313, 0,322,640, +,+,+, 611454 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 21105 21425 (CAAGG)n 416 + 21105 21425 0 2 103,94, 0,226, +,+, 611458 Simple_repeat Simple_repeat 585 chrUn_NT_464848v1 21336 21869 (CGAGG)n 584 + 21336 21869 0 2 118,66, 0,467, +,+, 611460 Simple_repeat Simple_repeat 585 chrUn_NT_464849v1 6211 7567 CR1-X 535 + 6211 7567 0 4 57,170,78,50, 0,1048,1218,1306, +,+,+,+, 611467 LINE CR1 585 chrUn_NT_464849v1 13090 13788 CR1-B2 728 + 13090 13788 0 2 225,470, 0,228, +,+, 611471 LINE CR1 585 chrUn_NT_464849v1 19204 19769 CR1-X 441 + 19204 19769 0 3 170,132,221, 0,170,344, +,+,+, 611479 LINE CR1 585 chrUn_NT_464850v1 14176 21721 GGXHOI 336 - 14176 21721 0 2 7277,250, 0,7295, -,-, 611488 Satellite W-chromosome 585 chrUn_NT_464851v1 2861 4376 (CGAGG)n 495 + 2861 4376 0 4 821,165,95,35, 0,1000,1200,1480, +,+,+,+, 611495 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 5530 6107 (CGAGG)n 584 + 5530 6107 0 2 243,279, 0,298, +,+, 611501 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 12334 12715 (CGAGG)n 582 + 12334 12715 0 2 177,178, 0,203, +,+, 611526 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 14845 15282 (CGAGG)n 448 + 14845 15282 0 2 232,17, 0,420, +,+, 611531 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 15508 16402 (CGAGG)n 508 + 15508 16402 0 2 345,523, 0,371, +,+, 611535 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 17264 18527 (CGAGG)n 472 + 17264 18527 0 4 201,202,186,370, 0,385,647,893, +,+,+,+, 611538 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 19806 20182 (CGAGG)n 460 + 19806 20182 0 2 184,181, 0,195, +,+, 611547 Simple_repeat Simple_repeat 585 chrUn_NT_464851v1 20888 21577 (CGAGG)n 368 + 20888 21577 0 2 172,474, 0,215, +,+, 611553 Simple_repeat Simple_repeat 585 chrUn_NT_464852v1 1696 3361 GGXHOI 423 + 1696 3361 0 3 286,610,731, 0,307,934, +,+,+, 611558 Satellite W-chromosome 585 chrUn_NT_464852v1 3484 5145 GGXHOI 450 + 3484 5145 0 2 286,1354, 0,307, +,+, 611559 Satellite W-chromosome 585 chrUn_NT_464852v1 5270 9963 GGXHOI 441 + 5270 9963 0 5 286,2390,809,286,816, 0,307,2714,3570,3877, +,+,+,+,+, 611560 Satellite W-chromosome 585 chrUn_NT_464852v1 10086 21715 GGXHOI 431 + 10086 21715 0 11 286,2221,355,144,1927,1553,232,932,2140,682,979, 0,307,2546,2918,3083,5032,6600,6849,7797,9954,10650, +,+,+,+,+,+,+,+,+,+,+, 611561 Satellite W-chromosome 585 chrUn_NT_464853v1 4356 4665 CR1-X 484 + 4356 4665 0 3 171,78,57, 0,171,252, +,+,+, 611567 LINE CR1 585 chrUn_NT_464854v1 19961 21687 CR1-G 508 + 19961 21687 0 3 610,98,386, 0,922,1340, +,+,+, 611585 LINE CR1 585 chrUn_NT_464855v1 950 5846 GGXHOI 552 - 950 5846 0 6 21,26,132,75,164,349, 0,255,2164,2336,3701,4547, -,-,-,-,-,-, 611590 Satellite W-chromosome 585 chrUn_NT_464855v1 5800 8429 Sat-CR1_GG 166 - 5800 8429 0 2 89,1012, 0,1617, -,-, 611595 Satellite Satellite 585 chrUn_NT_464855v1 9295 13046 GGXHOI 540 - 9295 13046 0 5 1125,92,281,91,155, 0,1617,1752,2533,3596, -,-,-,-,-, 611599 Satellite W-chromosome 585 chrUn_NT_464855v1 13000 14760 Sat-CR1_GG 170 - 13000 14760 0 2 89,61, 0,1699, -,-, 611603 Satellite Satellite 585 chrUn_NT_464855v1 14746 19691 GGXHOI 551 - 14746 19691 0 7 36,25,57,437,51,259,534, 0,1821,2329,2423,3234,3940,4411, -,-,-,-,-,-,-, 611605 Satellite W-chromosome 585 chrUn_NT_464855v1 19733 21818 GGXHOI 558 - 19733 21818 0 2 1097,56, 0,2029, -,-, 611612 Satellite W-chromosome 585 chrUn_NT_464856v1 12036 12287 (T)n 738 + 12036 12287 0 2 196,32, 0,219, +,+, 611624 Simple_repeat Simple_repeat 585 chrUn_NT_464856v1 14432 16191 GGERVL-A-int 749 - 14432 16191 0 2 1302,457, 0,1302, -,-, 611626 LTR ERVL 585 chrUn_NT_464857v1 402 1968 GGXHOI 438 - 402 1968 0 2 702,843, 0,723, -,-, 611630 Satellite W-chromosome 585 chrUn_NT_464857v1 3304 4258 (TTAGGG)n 587 + 3304 4258 0 2 362,539, 0,415, +,+, 611639 Simple_repeat Simple_repeat 585 chrUn_NT_464857v1 4586 5378 (TTAGGG)n 541 + 4586 5378 0 2 710,70, 0,722, +,+, 611643 Simple_repeat Simple_repeat 585 chrUn_NT_464858v1 5246 5892 CR1-D2 472 - 5246 5892 0 2 355,262, 0,384, -,-, 611651 LINE CR1 585 chrUn_NT_464859v1 6149 6470 GGXHOI 244 - 6149 6470 0 2 153,154, 0,167, -,-, 611671 Satellite W-chromosome 585 chrUn_NT_464859v1 11897 14752 GGXHOI 307 - 11897 14752 0 3 1120,166,1528, 0,1144,1327, -,-,-, 611678 Satellite W-chromosome 585 chrUn_NT_464859v1 15891 19861 GGXHOI 350 - 15891 19861 0 3 304,1766,1784, 0,362,2186, -,-,-, 611680 Satellite W-chromosome 585 chrUn_NT_464859v1 20126 21780 GGXHOI 347 - 20126 21780 0 3 262,389,915, 0,308,739, -,-,-, 611681 Satellite W-chromosome 585 chrUn_NT_464860v1 528 5522 GGXHOI 556 - 528 5522 0 8 31,191,402,18,271,145,683,1099, 0,460,668,1478,1696,2018,2709,3895, -,-,-,-,-,-,-,-, 611684 Satellite W-chromosome 585 chrUn_NT_464860v1 5610 10718 GGXHOI 572 - 5610 10718 0 8 340,151,56,1085,52,372,465,462, 0,391,992,1063,2356,2449,3501,4646, -,-,-,-,-,-,-,-, 611691 Satellite W-chromosome 585 chrUn_NT_464860v1 11450 15794 GGXHOI 571 - 11450 15794 0 6 468,14,537,463,381,660, 0,1084,1140,2227,3254,3684, -,-,-,-,-,-, 611697 Satellite W-chromosome 585 chrUn_NT_464860v1 15808 19256 GGXHOI 572 - 15808 19256 0 4 633,127,409,1106, 0,1197,1368,2342, -,-,-,-, 611702 Satellite W-chromosome 585 chrUn_NT_464860v1 19298 21768 GGXHOI 546 - 19298 21768 0 3 637,665,223, 0,1025,2247, -,-,-, 611706 Satellite W-chromosome 585 chrUn_NT_464861v1 5472 8330 Char12Mar1_GG 452 - 5472 8330 0 2 955,251, 0,2607, -,-, 611712 DNA hAT-Charlie 585 chrUn_NT_464861v1 13872 16684 Char12Mar1_GG 430 - 13872 16684 0 2 903,251, 0,2561, -,-, 611716 DNA hAT-Charlie 585 chrUn_NT_464862v1 10566 10672 (ATTA)n 748 + 10566 10672 0 2 25,26, 0,80, +,+, 611734 Simple_repeat Simple_repeat 585 chrUn_NT_464862v1 10901 11181 (ACCCCATAGGG)n 638 + 10901 11181 0 2 113,41, 0,239, +,+, 611736 Satellite Satellite 585 chrUn_NT_464862v1 11287 11748 (CTCTATGGGG)n 720 - 11287 11748 0 2 148,194, 0,267, -,-, 611739 Satellite Satellite 585 chrUn_NT_464862v1 12144 12550 (CTCTATGGGG)n 672 - 12144 12550 0 2 116,42, 0,364, -,-, 611743 Satellite Satellite 585 chrUn_NT_464862v1 12510 13217 (CTCTATGGGG)n 575 + 12510 13217 0 3 208,92,287, 0,328,420, +,+,+, 611745 Satellite Satellite 585 chrUn_NT_464862v1 13394 14056 (ACCCCATAGGG)n 514 + 13394 14056 0 4 157,34,74,62, 0,319,404,600, +,+,+,+, 611748 Satellite Satellite 585 chrUn_NT_464862v1 13551 13849 (CTCTATGGGG)n 621 + 13551 13849 0 2 162,136, 0,162, +,+, 611749 Satellite Satellite 585 chrUn_NT_464863v1 1079 1728 CR1-X2 592 - 1079 1728 0 2 63,356, 0,293, -,-, 611753 LINE CR1 585 chrUn_NT_464863v1 5821 6579 CR1-C2 691 + 5821 6579 0 2 406,57, 0,701, +,+, 611761 LINE CR1 585 chrUn_NT_464863v1 13709 14358 CR1-X2 592 - 13709 14358 0 2 63,356, 0,293, -,-, 611767 LINE CR1 585 chrUn_NT_464863v1 18471 19229 CR1-C2 696 + 18471 19229 0 2 406,57, 0,701, +,+, 611776 LINE CR1 585 chrUn_NT_464864v1 775 10392 GGXHOI 385 - 775 10392 0 3 6490,1127,1967, 0,6506,7650, -,-,-, 611784 Satellite W-chromosome 585 chrUn_NT_464864v1 10666 15944 GGXHOI 371 - 10666 15944 0 6 1260,404,1877,524,918,179, 0,1281,1718,3625,4166,5099, -,-,-,-,-,-, 611785 Satellite W-chromosome 585 chrUn_NT_464864v1 16266 21417 GGXHOI 358 - 16266 21417 0 5 1123,280,2497,983,130, 0,1143,1473,4016,5021, -,-,-,-,-, 611786 Satellite W-chromosome 585 chrUn_NT_464865v1 4659 5559 Sat-CR1_GG 194 - 4659 5559 0 2 479,162, 0,738, -,-, 611804 Satellite Satellite 585 chrUn_NT_464865v1 7720 8214 Sat-CR1_GG 168 - 7720 8214 0 2 139,185, 0,309, -,-, 611811 Satellite Satellite 585 chrUn_NT_464865v1 9124 9701 Sat-CR1_GG 180 - 9124 9701 0 2 179,235, 0,342, -,-, 611817 Satellite Satellite 585 chrUn_NT_464865v1 11976 12565 Sat-CR1_GG 192 - 11976 12565 0 2 159,164, 0,425, -,-, 611827 Satellite Satellite 585 chrUn_NT_464865v1 13030 13389 GGXHOI 384 - 13030 13389 0 2 166,168, 0,191, -,-, 611830 Satellite W-chromosome 585 chrUn_NT_464865v1 14854 15440 Sat-CR1_GG 152 - 14854 15440 0 2 177,244, 0,342, -,-, 611833 Satellite Satellite 585 chrUn_NT_464866v1 10014 10789 GGLTR3F1 883 - 10014 10789 0 2 490,285, 0,490, -,-, 611858 LTR ERVL 585 chrUn_NT_464867v1 1357 2019 GGLTR11-int 402 + 1357 2019 0 2 127,314, 0,348, +,+, 611868 LTR ERV1 585 chrUn_NT_464868v1 4387 10869 GGXHOI 433 + 4387 10869 0 2 4936,1510, 0,4972, +,+, 611889 Satellite W-chromosome 585 chrUn_NT_464868v1 14728 15496 GGXHOI 357 + 14728 15496 0 2 595,152, 0,616, +,+, 611892 Satellite W-chromosome 585 chrUn_NT_464868v1 15612 21169 GGXHOI 440 + 15612 21169 0 2 665,4875, 0,682, +,+, 611893 Satellite W-chromosome 585 chrUn_NT_464869v1 6371 7320 GGXHOI 353 - 6371 7320 0 2 454,470, 0,479, -,-, 611905 Satellite W-chromosome 585 chrUn_NT_464869v1 9169 9987 GGXHOI 331 - 9169 9987 0 2 278,482, 0,336, -,-, 611908 Satellite W-chromosome 585 chrUn_NT_464869v1 11230 12718 GGXHOI 370 - 11230 12718 0 2 516,909, 0,579, -,-, 611911 Satellite W-chromosome 585 chrUn_NT_464869v1 20310 21712 GGXHOI 379 - 20310 21712 0 2 1004,335, 0,1067, -,-, 611924 Satellite W-chromosome 585 chrUn_NT_464870v1 3097 5284 GGXHOI 412 - 3097 5284 0 2 1535,637, 0,1550, -,-, 611926 Satellite W-chromosome 585 chrUn_NT_464870v1 5383 9875 GGXHOI 415 - 5383 9875 0 3 1545,2281,636, 0,1560,3856, -,-,-, 611927 Satellite W-chromosome 585 chrUn_NT_464870v1 9973 19063 GGXHOI 418 - 9973 19063 0 2 3843,5232, 0,3858, -,-, 611928 Satellite W-chromosome 585 chrUn_NT_464871v1 3730 4353 CR1-H 685 - 3730 4353 0 2 139,478, 0,145, -,-, 611936 LINE CR1 585 chrUn_NT_464871v1 7718 8175 CR1-H 677 - 7718 8175 0 2 163,294, 0,163, -,-, 611940 LINE CR1 585 chrUn_NT_464871v1 18566 19189 CR1-H 685 - 18566 19189 0 2 139,478, 0,145, -,-, 611950 LINE CR1 585 chrUn_NT_464872v1 1596 2970 GGXHOI 354 - 1596 2970 0 2 288,1025, 0,349, -,-, 611955 Satellite W-chromosome 585 chrUn_NT_464872v1 9786 11067 GGXHOI 295 - 9786 11067 0 2 888,334, 0,947, -,-, 611964 Satellite W-chromosome 585 chrUn_NT_464872v1 14248 16525 GGXHOI 335 - 14248 16525 0 2 1025,1202, 0,1075, -,-, 611969 Satellite W-chromosome 585 chrUn_NT_464872v1 21109 21658 GGXHOI 287 - 21109 21658 0 2 218,313, 0,236, -,-, 611977 Satellite W-chromosome 585 chrUn_NT_464873v1 9035 10304 CR1-H 585 + 9035 10304 0 2 1158,111, 0,1158, +,+, 611991 LINE CR1 585 chrUn_NT_464873v1 12298 12925 CR1-H 692 + 12298 12925 0 2 469,139, 0,488, +,+, 611994 LINE CR1 585 chrUn_NT_464874v1 3635 4496 GGXHOI 327 - 3635 4496 0 2 232,582, 0,279, -,-, 612005 Satellite W-chromosome 585 chrUn_NT_464874v1 4576 5417 GGXHOI 319 - 4576 5417 0 2 585,241, 0,600, -,-, 612006 Satellite W-chromosome 585 chrUn_NT_464874v1 5721 7048 GGXHOI 400 - 5721 7048 0 3 609,274,412, 0,621,915, -,-,-, 612007 Satellite W-chromosome 585 chrUn_NT_464874v1 7853 10707 GGXHOI 401 - 7853 10707 0 2 938,1870, 0,984, -,-, 612009 Satellite W-chromosome 585 chrUn_NT_464874v1 10934 11404 GGXHOI 334 - 10934 11404 0 2 242,199, 0,271, -,-, 612010 Satellite W-chromosome 585 chrUn_NT_464874v1 12232 15209 GGXHOI 379 - 12232 15209 0 3 164,264,2470, 0,199,507, -,-,-, 612011 Satellite W-chromosome 585 chrUn_NT_464874v1 15804 16698 GGXHOI 384 - 15804 16698 0 2 439,437, 0,457, -,-, 612013 Satellite W-chromosome 585 chrUn_NT_464874v1 18006 21642 GGXHOI 398 - 18006 21642 0 6 394,163,571,147,1692,532, 0,418,618,1202,1364,3104, -,-,-,-,-,-, 612015 Satellite W-chromosome 585 chrUn_NT_464875v1 1963 3143 (CGAGG)n 532 + 1963 3143 0 2 243,761, 0,419, +,+, 612022 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 4263 4774 (CGAGG)n 548 + 4263 4774 0 2 178,317, 0,194, +,+, 612031 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 5064 6124 (CGAGG)n 503 + 5064 6124 0 3 180,524,150, 0,359,910, +,+,+, 612034 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 7018 7573 (CGAGG)n 523 + 7018 7573 0 2 176,349, 0,206, +,+, 612041 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 7905 10363 (CGAGG)n 525 + 7905 10363 0 6 368,224,173,353,992,228, 0,413,653,844,1218,2230, +,+,+,+,+,+, 612045 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 10434 11885 (CGAGG)n 529 + 10434 11885 0 4 175,116,745,175, 0,222,514,1276, +,+,+,+, 612047 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 11975 12499 (CGAGG)n 537 + 11975 12499 0 2 179,311, 0,213, +,+, 612050 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 12913 14153 (CGAGG)n 555 + 12913 14153 0 4 362,298,108,231, 0,407,725,1009, +,+,+,+, 612054 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 14402 16302 (CGAGG)n 518 + 14402 16302 0 6 383,622,183,181,180,183, 0,414,1072,1296,1499,1717, +,+,+,+,+,+, 612057 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 18299 19692 (CGAGG)n 565 + 18299 19692 0 6 176,254,78,179,180,228, 0,198,632,747,953,1165, +,+,+,+,+,+, 612065 Simple_repeat Simple_repeat 585 chrUn_NT_464875v1 19769 20314 (CGAGG)n 502 + 19769 20314 0 2 228,136, 0,409, +,+, 612068 Simple_repeat Simple_repeat 585 chrUn_NT_464876v1 2220 3988 GGXHOI 391 - 2220 3988 0 2 1254,482, 0,1286, -,-, 612078 Satellite W-chromosome 585 chrUn_NT_464876v1 4073 4593 GGXHOI 414 - 4073 4593 0 2 271,234, 0,286, -,-, 612079 Satellite W-chromosome 585 chrUn_NT_464876v1 4736 9222 GGXHOI 369 - 4736 9222 0 6 938,1520,178,979,225,492, 0,956,2494,2704,3736,3994, -,-,-,-,-,-, 612080 Satellite W-chromosome 585 chrUn_NT_464876v1 9311 11519 GGXHOI 373 - 9311 11519 0 5 145,322,179,1257,175, 0,197,537,747,2033, -,-,-,-,-, 612081 Satellite W-chromosome 585 chrUn_NT_464876v1 12040 12756 GGXHOI 297 - 12040 12756 0 2 261,392, 0,324, -,-, 612083 Satellite W-chromosome 585 chrUn_NT_464876v1 12842 14391 GGXHOI 407 - 12842 14391 0 2 792,739, 0,810, -,-, 612084 Satellite W-chromosome 585 chrUn_NT_464876v1 14734 16259 GGXHOI 344 - 14734 16259 0 3 141,933,383, 0,195,1142, -,-,-, 612085 Satellite W-chromosome 585 chrUn_NT_464876v1 16687 17690 GGXHOI 373 - 16687 17690 0 3 638,178,136, 0,657,867, -,-,-, 612086 Satellite W-chromosome 585 chrUn_NT_464876v1 17777 19304 GGXHOI 384 - 17777 19304 0 3 574,519,403, 0,588,1124, -,-,-, 612087 Satellite W-chromosome 585 chrUn_NT_464876v1 19392 20668 GGXHOI 397 - 19392 20668 0 3 517,174,530, 0,540,746, -,-,-, 612088 Satellite W-chromosome 585 chrUn_NT_464876v1 20774 21607 GGXHOI 314 - 20774 21607 0 2 385,431, 0,402, -,-, 612089 Satellite W-chromosome 585 chrUn_NT_464877v1 801 2557 GGERVL-A-int 752 - 801 2557 0 2 1299,457, 0,1299, -,-, 612091 LTR ERVL 585 chrUn_NT_464878v1 12859 13242 (CCCTAA)n 564 + 12859 13242 0 2 181,190, 0,193, +,+, 612107 Simple_repeat Simple_repeat 585 chrUn_NT_464878v1 14075 14565 (CCCTAA)n 658 + 14075 14565 0 2 248,58, 0,432, +,+, 612113 Simple_repeat Simple_repeat 585 chrUn_NT_464878v1 14552 14759 (CCTAA)n 596 + 14552 14759 0 2 25,6, 0,201, +,+, 612115 Simple_repeat Simple_repeat 585 chrUn_NT_464878v1 14771 15359 (CCCTAA)n 606 + 14771 15359 0 3 165,35,184, 0,343,404, +,+,+, 612117 Simple_repeat Simple_repeat 585 chrUn_NT_464878v1 15500 16098 (CCCTAA)n 667 + 15500 16098 0 3 182,234,143, 0,182,455, +,+,+, 612120 Simple_repeat Simple_repeat 585 chrUn_NT_464878v1 16573 20816 GGXHOI 420 + 16573 20816 0 2 2792,1435, 0,2808, +,+, 612123 Satellite W-chromosome 585 chrUn_NT_464879v1 2709 5157 GGLTR7-int 477 - 2709 5157 0 3 795,1210,404, 0,802,2044, -,-,-, 612126 LTR ERV1 585 chrUn_NT_464881v1 819 2270 GGXHOI 353 - 819 2270 0 2 139,1298, 0,153, -,-, 612149 Satellite W-chromosome 585 chrUn_NT_464881v1 2372 3066 GGXHOI 336 - 2372 3066 0 2 301,378, 0,316, -,-, 612150 Satellite W-chromosome 585 chrUn_NT_464881v1 3365 7088 GGXHOI 379 - 3365 7088 0 4 1278,265,251,1828, 0,1302,1582,1895, -,-,-,-, 612151 Satellite W-chromosome 585 chrUn_NT_464881v1 7184 8407 GGXHOI 373 - 7184 8407 0 2 788,420, 0,803, -,-, 612152 Satellite W-chromosome 585 chrUn_NT_464881v1 8516 14866 GGXHOI 415 - 8516 14866 0 5 2828,694,226,2363,150, 0,2851,3566,3815,6200, -,-,-,-,-, 612153 Satellite W-chromosome 585 chrUn_NT_464881v1 14965 21604 GGXHOI 378 - 14965 21604 0 5 738,2326,478,314,2724, 0,756,3099,3589,3915, -,-,-,-,-, 612154 Satellite W-chromosome 585 chrUn_NT_464882v1 1782 9427 GGXHOI 432 + 1782 9427 0 4 1423,1807,724,3589, 0,1464,3313,4056, +,+,+,+, 612156 Satellite W-chromosome 585 chrUn_NT_464882v1 9537 21586 GGXHOI 484 - 9537 21586 0 17 151,2549,692,735,232,151,270,1491,398,529,153,607,235,359,872,1803,526, 0,166,2730,3436,4185,4430,4596,4888,6420,6832,7376,7543,8164,8414,8791,9705,11523, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 612157 Satellite W-chromosome 585 chrUn_NT_464883v1 2194 3303 GGXHOI 336 - 2194 3303 0 3 311,472,244, 0,374,865, -,-,-, 612159 Satellite W-chromosome 585 chrUn_NT_464883v1 3375 4891 GGXHOI 373 - 3375 4891 0 3 411,547,524, 0,433,992, -,-,-, 612160 Satellite W-chromosome 585 chrUn_NT_464883v1 4990 6781 GGXHOI 377 - 4990 6781 0 2 657,1081, 0,710, -,-, 612161 Satellite W-chromosome 585 chrUn_NT_464883v1 6878 9937 GGXHOI 361 - 6878 9937 0 2 2318,725, 0,2334, -,-, 612162 Satellite W-chromosome 585 chrUn_NT_464883v1 10036 14940 GGXHOI 361 - 10036 14940 0 7 539,1388,950,151,296,794,661, 0,551,1951,2950,3124,3437,4243, -,-,-,-,-,-,-, 612163 Satellite W-chromosome 585 chrUn_NT_464883v1 15004 18457 GGXHOI 371 - 15004 18457 0 5 1079,810,825,259,355, 0,1115,1942,2818,3098, -,-,-,-,-, 612164 Satellite W-chromosome 585 chrUn_NT_464883v1 18708 19811 GGXHOI 341 - 18708 19811 0 4 129,338,232,304, 0,165,526,799, -,-,-,-, 612165 Satellite W-chromosome 585 chrUn_NT_464883v1 20097 21593 GGXHOI 359 - 20097 21593 0 2 193,1286, 0,210, -,-, 612166 Satellite W-chromosome 585 chrUn_NT_464884v1 5120 6523 GGXHOI 427 + 5120 6523 0 2 1238,144, 0,1259, +,+, 612169 Satellite W-chromosome 585 chrUn_NT_464884v1 6606 15769 GGXHOI 406 + 6606 15769 0 10 779,643,440,1184,1274,1274,937,436,518,1486, 0,795,1455,1911,3111,4401,5691,6650,7104,7677, +,+,+,+,+,+,+,+,+,+, 612170 Satellite W-chromosome 585 chrUn_NT_464885v1 5693 6055 (CCCAAT)n 286 + 5693 6055 0 2 167,141, 0,221, +,+, 612186 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 9945 12391 GGLTR7-int 582 + 9945 12391 0 2 337,788, 0,1658, +,+, 612196 LTR ERV1 585 chrUn_NT_464885v1 12587 14793 GGLTR10D-int 874 - 12587 14793 0 2 361,1839, 0,367, -,-, 612199 LTR ERVK 585 chrUn_NT_464885v1 14832 15239 (CGAGG)n 575 + 14832 15239 0 2 208,183, 0,224, +,+, 612201 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 15743 17268 (CGAGG)n 531 + 15743 17268 0 6 219,48,14,65,214,408, 0,398,629,823,888,1117, +,+,+,+,+,+, 612205 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 17608 18488 (CGAGG)n 535 + 17608 18488 0 3 184,179,479, 0,207,401, +,+,+, 612213 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 18505 19076 (CGAGG)n 559 + 18505 19076 0 2 360,177, 0,394, +,+, 612215 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 19265 20475 (CGAGG)n 519 + 19265 20475 0 3 189,229,597, 0,208,613, +,+,+, 612216 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 20624 20996 (CAAGG)n 397 + 20624 20996 0 2 178,174, 0,198, +,+, 612219 Simple_repeat Simple_repeat 585 chrUn_NT_464885v1 20927 21421 (CGAGG)n 522 + 20927 21421 0 2 310,169, 0,325, +,+, 612220 Simple_repeat Simple_repeat 585 chrUn_NT_464886v1 362 586 Sat-CR1_GG 184 - 362 586 0 2 32,22, 0,202, -,-, 612223 Satellite Satellite 585 chrUn_NT_464887v1 3204 5560 GGXHOI 505 + 3204 5560 0 4 165,379,130,1517, 0,209,648,839, +,+,+,+, 612242 Satellite W-chromosome 585 chrUn_NT_464887v1 5707 8506 GGXHOI 586 + 5707 8506 0 2 179,2429, 0,370, +,+, 612243 Satellite W-chromosome 585 chrUn_NT_464887v1 8572 9888 GGXHOI 580 + 8572 9888 0 2 360,754, 0,562, +,+, 612245 Satellite W-chromosome 585 chrUn_NT_464887v1 9954 11588 GGXHOI 582 + 9954 11588 0 2 360,1087, 0,547, +,+, 612247 Satellite W-chromosome 585 chrUn_NT_464887v1 13895 18003 GGXHOI 584 + 13895 18003 0 3 2225,1249,300, 0,2497,3808, +,+,+, 612251 Satellite W-chromosome 585 chrUn_NT_464887v1 18623 19413 GGXHOI 590 + 18623 19413 0 2 315,201, 0,589, +,+, 612255 Satellite W-chromosome 585 chrUn_NT_464887v1 19479 21573 GGXHOI 548 + 19479 21573 0 2 1906,11, 0,2083, +,+, 612257 Satellite W-chromosome 585 chrUn_NT_464888v1 1017 1977 GGXHOI 349 - 1017 1977 0 2 317,612, 0,348, -,-, 612260 Satellite W-chromosome 585 chrUn_NT_464889v1 4908 6293 GGXHOI 514 - 4908 6293 0 2 970,198, 0,1187, -,-, 612276 Satellite W-chromosome 585 chrUn_NT_464889v1 7340 8238 GGXHOI 462 - 7340 8238 0 2 643,45, 0,853, -,-, 612279 Satellite W-chromosome 585 chrUn_NT_464889v1 11465 12381 GGXHOI 499 - 11465 12381 0 2 615,252, 0,664, -,-, 612283 Satellite W-chromosome 585 chrUn_NT_464889v1 14977 16454 GGXHOI 501 - 14977 16454 0 2 160,1306, 0,171, -,-, 612286 Satellite W-chromosome 585 chrUn_NT_464889v1 16525 17404 GGXHOI 522 - 16525 17404 0 2 134,704, 0,175, -,-, 612287 Satellite W-chromosome 585 chrUn_NT_464889v1 17484 18991 GGXHOI 485 - 17484 18991 0 2 470,983, 0,524, -,-, 612288 Satellite W-chromosome 585 chrUn_NT_464889v1 19060 20598 GGXHOI 445 - 19060 20598 0 3 885,235,346, 0,946,1192, -,-,-, 612289 Satellite W-chromosome 585 chrUn_NT_464889v1 20670 21552 GGXHOI 486 - 20670 21552 0 2 127,742, 0,140, -,-, 612290 Satellite W-chromosome 585 chrUn_NT_464890v1 1495 2605 GGXHOI 355 - 1495 2605 0 2 541,547, 0,563, -,-, 612292 Satellite W-chromosome 585 chrUn_NT_464890v1 10417 13813 GGXHOI 367 - 10417 13813 0 2 2357,1021, 0,2375, -,-, 612298 Satellite W-chromosome 585 chrUn_NT_464890v1 14025 15623 GGXHOI 360 - 14025 15623 0 2 556,1024, 0,574, -,-, 612299 Satellite W-chromosome 585 chrUn_NT_464890v1 15828 21522 GGXHOI 358 - 15828 21522 0 2 2311,3325, 0,2369, -,-, 612300 Satellite W-chromosome 585 chrUn_NT_464891v1 15982 20213 GGXHOI 344 - 15982 20213 0 3 2818,892,484, 0,2840,3747, -,-,-, 612310 Satellite W-chromosome 585 chrUn_NT_464891v1 20316 21557 GGXHOI 411 - 20316 21557 0 2 777,443, 0,798, -,-, 612311 Satellite W-chromosome 585 chrUn_NT_464892v1 418 14572 GGXHOI 394 + 418 14572 0 9 1712,593,1892,432,978,314,7226,564,289, 0,1738,2347,4257,4701,5697,6029,13267,13865, +,+,+,+,+,+,+,+,+, 612313 Satellite W-chromosome 585 chrUn_NT_464892v1 15626 21442 GGXHOI 370 + 15626 21442 0 4 1336,2181,1909,296, 0,1351,3549,5520, +,+,+,+, 612315 Satellite W-chromosome 585 chrUn_NT_464893v1 4667 6424 GGERVL-A-int 755 + 4667 6424 0 2 457,1300, 0,457, +,+, 612318 LTR ERVL 585 chrUn_NT_464897v1 7635 9807 CR1-C 849 - 7635 9807 0 2 625,1547, 0,625, -,-, 612363 LINE CR1 585 chrUn_NT_464897v1 11987 13484 GGLTR7B 581 - 11987 13484 0 2 114,890, 0,607, -,-, 612367 LTR ERV1 585 chrUn_NT_464898v1 3428 5045 GGXHOI 389 + 3428 5045 0 2 1039,515, 0,1102, +,+, 612385 Satellite W-chromosome 585 chrUn_NT_464898v1 5716 7831 GGXHOI 387 + 5716 7831 0 2 1043,1009, 0,1106, +,+, 612387 Satellite W-chromosome 585 chrUn_NT_464898v1 9157 10778 GGXHOI 388 + 9157 10778 0 2 1043,515, 0,1106, +,+, 612389 Satellite W-chromosome 585 chrUn_NT_464898v1 12599 15933 GGXHOI 379 + 12599 15933 0 3 1046,1083,1080, 0,1109,2254, +,+,+, 612392 Satellite W-chromosome 585 chrUn_NT_464898v1 16936 17446 GGXHOI 369 + 16936 17446 0 2 304,143, 0,367, +,+, 612394 Satellite W-chromosome 585 chrUn_NT_464899v1 8940 9506 CR1-X 441 + 8940 9506 0 3 171,132,221, 0,171,345, +,+,+, 612408 LINE CR1 585 chrUn_NT_464899v1 19894 21004 CR1-B2 693 + 19894 21004 0 2 224,883, 0,227, +,+, 612415 LINE CR1 585 chrUn_NT_464900v1 4435 5058 CR1-H 388 - 4435 5058 0 2 379,208, 0,415, -,-, 612422 LINE CR1 585 chrUn_NT_464900v1 5076 6221 CR1-C2 686 + 5076 6221 0 2 133,86, 0,1059, +,+, 612423 LINE CR1 585 chrUn_NT_464900v1 9157 10411 Char12Mar1_GG 592 - 9157 10411 0 2 121,581, 0,673, -,-, 612427 DNA hAT-Charlie 585 chrUn_NT_464900v1 12866 13490 CR1-H 378 - 12866 13490 0 2 379,209, 0,415, -,-, 612430 LINE CR1 585 chrUn_NT_464900v1 15371 15995 CR1-H 378 - 15371 15995 0 2 379,209, 0,415, -,-, 612433 LINE CR1 585 chrUn_NT_464900v1 17874 18496 CR1-H 384 - 17874 18496 0 2 378,208, 0,414, -,-, 612436 LINE CR1 585 chrUn_NT_464900v1 20361 20970 CR1-H 353 - 20361 20970 0 2 368,206, 0,403, -,-, 612439 LINE CR1 585 chrUn_NT_464901v1 2927 4543 GGXHOI 356 - 2927 4543 0 3 279,181,1080, 0,292,536, -,-,-, 612446 Satellite W-chromosome 585 chrUn_NT_464902v1 7264 8386 CR1-B2 698 - 7264 8386 0 2 894,225, 0,897, -,-, 612476 LINE CR1 585 chrUn_NT_464902v1 14416 15542 CR1-B2 707 - 14416 15542 0 2 896,227, 0,899, -,-, 612484 LINE CR1 585 chrUn_NT_464902v1 21058 21366 CR1-X 523 - 21058 21366 0 3 50,78,170, 0,60,138, -,-,-, 612490 LINE CR1 585 chrUn_NT_464904v1 451 2835 GGERV10_LTR 871 + 451 2835 0 2 41,36, 0,2348, +,+, 612505 LTR ERVL 585 chrUn_NT_464904v1 493 2668 GGLTR10D-int 895 + 493 2668 0 2 1809,363, 0,1812, +,+, 612506 LTR ERVK 585 chrUn_NT_464904v1 2847 5297 GGLTR7-int 599 - 2847 5297 0 2 787,338, 0,2112, -,-, 612507 LTR ERV1 585 chrUn_NT_464904v1 9446 10052 G-rich 402 + 9446 10052 0 2 40,517, 0,89, +,+, 612512 Low_complexity Low_complexity 585 chrUn_NT_464905v1 5595 6506 (ACCCCATAGGG)n 520 - 5595 6506 0 3 199,97,436, 0,346,475, -,-,-, 612525 Satellite Satellite 585 chrUn_NT_464905v1 7765 8299 (ACCCCATAGGG)n 544 - 7765 8299 0 3 188,34,42, 0,329,492, -,-,-, 612530 Satellite Satellite 585 chrUn_NT_464905v1 7953 8257 (ACCCATAGGG)n 506 - 7953 8257 0 2 141,129, 0,175, -,-, 612531 Satellite Satellite 585 chrUn_NT_464905v1 8372 8838 (ACCCCATAGGG)n 587 - 8372 8838 0 2 292,174, 0,292, -,-, 612532 Satellite Satellite 585 chrUn_NT_464905v1 8965 9306 (ACCCCATAGGG)n 546 - 8965 9306 0 2 88,149, 0,192, -,-, 612533 Satellite Satellite 585 chrUn_NT_464905v1 9284 9650 (ACCCCATAGGG)n 618 + 9284 9650 0 2 133,20, 0,346, +,+, 612535 Satellite Satellite 585 chrUn_NT_464905v1 10085 10715 (ACCCCATAGGG)n 570 - 10085 10715 0 2 431,199, 0,431, -,-, 612539 Satellite Satellite 585 chrUn_NT_464905v1 10813 11235 (ACCCCATAGGG)n 550 - 10813 11235 0 2 224,57, 0,365, -,-, 612540 Satellite Satellite 585 chrUn_NT_464905v1 12216 12517 (ACCCCATAGGG)n 528 - 12216 12517 0 2 129,155, 0,146, -,-, 612544 Satellite Satellite 585 chrUn_NT_464905v1 12593 13021 (ACCCCATAGGG)n 544 - 12593 13021 0 2 205,223, 0,205, -,-, 612545 Satellite Satellite 585 chrUn_NT_464905v1 13497 13798 (ACCCCATAGGG)n 528 - 13497 13798 0 2 129,155, 0,146, -,-, 612547 Satellite Satellite 585 chrUn_NT_464905v1 14248 14549 (ACCCCATAGGG)n 528 - 14248 14549 0 2 129,155, 0,146, -,-, 612549 Satellite Satellite 585 chrUn_NT_464905v1 14625 14926 (ACCCCATAGGG)n 528 - 14625 14926 0 2 129,155, 0,146, -,-, 612550 Satellite Satellite 585 chrUn_NT_464905v1 15002 15303 (ACCCCATAGGG)n 512 - 15002 15303 0 2 129,172, 0,129, -,-, 612551 Satellite Satellite 585 chrUn_NT_464905v1 15379 15680 (ACCCCATAGGG)n 512 - 15379 15680 0 2 129,172, 0,129, -,-, 612552 Satellite Satellite 585 chrUn_NT_464905v1 15755 16055 (ACCCCATAGGG)n 503 - 15755 16055 0 2 129,171, 0,129, -,-, 612553 Satellite Satellite 585 chrUn_NT_464905v1 16131 16432 (ACCCCATAGGG)n 512 - 16131 16432 0 2 129,172, 0,129, -,-, 612554 Satellite Satellite 585 chrUn_NT_464905v1 16508 16808 (ACCCCATAGGG)n 512 - 16508 16808 0 2 129,171, 0,129, -,-, 612555 Satellite Satellite 585 chrUn_NT_464905v1 17526 17950 (ACCCCATAGGG)n 522 - 17526 17950 0 2 226,17, 0,407, -,-, 612559 Satellite Satellite 585 chrUn_NT_464905v1 18415 18709 (ACCCCATAGGG)n 480 - 18415 18709 0 2 127,150, 0,144, -,-, 612562 Satellite Satellite 585 chrUn_NT_464905v1 18793 19158 (ACCCCATAGGG)n 529 - 18793 19158 0 2 142,198, 0,167, -,-, 612563 Satellite Satellite 585 chrUn_NT_464905v1 19623 19912 (ACCCCATAGGG)n 515 - 19623 19912 0 2 126,155, 0,134, -,-, 612565 Satellite Satellite 585 chrUn_NT_464905v1 19990 20290 (ACCCCATAGGG)n 520 - 19990 20290 0 2 129,171, 0,129, -,-, 612566 Satellite Satellite 585 chrUn_NT_464905v1 20738 21026 (ACCCCATAGGG)n 397 - 20738 21026 0 2 124,164, 0,124, -,-, 612568 Satellite Satellite 585 chrUn_NT_464906v1 2203 3454 GGXHOI 361 - 2203 3454 0 2 946,244, 0,1007, -,-, 612571 Satellite W-chromosome 585 chrUn_NT_464906v1 3765 5801 GGXHOI 356 - 3765 5801 0 5 327,147,192,718,554, 0,352,525,742,1482, -,-,-,-,-, 612572 Satellite W-chromosome 585 chrUn_NT_464906v1 6006 8188 GGXHOI 372 - 6006 8188 0 3 894,960,284, 0,914,1898, -,-,-, 612573 Satellite W-chromosome 585 chrUn_NT_464906v1 8289 15017 GGXHOI 394 - 8289 15017 0 6 598,1051,885,2905,976,178, 0,618,1683,2629,5554,6550, -,-,-,-,-,-, 612574 Satellite W-chromosome 585 chrUn_NT_464906v1 15229 18286 GGXHOI 394 - 15229 18286 0 5 344,972,161,555,911, 0,364,1356,1534,2146, -,-,-,-,-, 612575 Satellite W-chromosome 585 chrUn_NT_464906v1 18403 19778 GGXHOI 352 - 18403 19778 0 2 821,535, 0,840, -,-, 612576 Satellite W-chromosome 585 chrUn_NT_464906v1 19869 21457 GGXHOI 376 - 19869 21457 0 2 982,592, 0,996, -,-, 612577 Satellite W-chromosome 585 chrUn_NT_464907v1 6674 7791 CR1-B2 698 + 6674 7791 0 2 223,891, 0,226, +,+, 612584 LINE CR1 585 chrUn_NT_464909v1 20653 21373 GGXHOI 419 - 20653 21373 0 2 565,143, 0,577, -,-, 612603 Satellite W-chromosome 585 chrUn_NT_464910v1 1552 4319 Sat-CR1_GG 165 + 1552 4319 0 4 474,239,698,803, 0,633,928,1964, +,+,+,+, 612607 Satellite Satellite 585 chrUn_NT_464910v1 4457 6299 Sat-CR1_GG 198 + 4457 6299 0 2 701,803, 0,1039, +,+, 612611 Satellite Satellite 585 chrUn_NT_464910v1 6437 8279 Sat-CR1_GG 198 + 6437 8279 0 2 701,803, 0,1039, +,+, 612614 Satellite Satellite 585 chrUn_NT_464910v1 8417 10259 Sat-CR1_GG 198 + 8417 10259 0 2 701,803, 0,1039, +,+, 612617 Satellite Satellite 585 chrUn_NT_464910v1 10397 14221 Sat-CR1_GG 183 + 10397 14221 0 4 701,928,701,803, 0,1040,1981,3021, +,+,+,+, 612620 Satellite Satellite 585 chrUn_NT_464910v1 14359 16201 Sat-CR1_GG 198 + 14359 16201 0 2 701,803, 0,1039, +,+, 612624 Satellite Satellite 585 chrUn_NT_464910v1 16339 20954 Sat-CR1_GG 204 + 16339 20954 0 6 701,928,701,926,249,330, 0,1040,1981,3020,3959,4285, +,+,+,+,+,+, 612627 Satellite Satellite 585 chrUn_NT_464911v1 5117 5208 A-rich 432 + 5117 5208 0 2 22,11, 0,80, +,+, 612644 Low_complexity Low_complexity 585 chrUn_NT_464912v1 3591 10139 GGXHOI 376 + 3591 10139 0 5 1101,1516,1314,1315,1198, 0,1133,2673,4010,5350, +,+,+,+,+, 612682 Satellite W-chromosome 585 chrUn_NT_464912v1 10279 20906 GGXHOI 404 + 10279 20906 0 9 1103,1306,1308,1306,1308,1516,1101,1254,149, 0,1135,2473,3813,5151,6491,8030,9163,10478, +,+,+,+,+,+,+,+,+, 612683 Satellite W-chromosome 585 chrUn_NT_464913v1 474 861 GGXHOI 411 + 474 861 0 2 148,219, 0,168, +,+, 612685 Satellite W-chromosome 585 chrUn_NT_464913v1 1041 2828 GGXHOI 465 + 1041 2828 0 2 185,1577, 0,210, +,+, 612686 Satellite W-chromosome 585 chrUn_NT_464913v1 3423 5174 GGXHOI 447 - 3423 5174 0 4 149,719,147,688, 0,166,897,1063, -,-,-,-, 612689 Satellite W-chromosome 585 chrUn_NT_464913v1 5256 7306 GGXHOI 445 - 5256 7306 0 5 234,464,527,440,285, 0,262,737,1276,1765, -,-,-,-,-, 612690 Satellite W-chromosome 585 chrUn_NT_464913v1 7387 8407 GGXHOI 404 - 7387 8407 0 2 503,468, 0,552, -,-, 612691 Satellite W-chromosome 585 chrUn_NT_464913v1 8542 9295 GGXHOI 469 - 8542 9295 0 3 379,181,164, 0,394,589, -,-,-, 612692 Satellite W-chromosome 585 chrUn_NT_464913v1 9382 11695 GGXHOI 439 - 9382 11695 0 5 147,363,611,443,671, 0,166,540,1162,1642, -,-,-,-,-, 612693 Satellite W-chromosome 585 chrUn_NT_464913v1 11824 12609 GGXHOI 349 - 11824 12609 0 3 323,152,241, 0,338,544, -,-,-, 612694 Satellite W-chromosome 585 chrUn_NT_464913v1 14084 16245 GGXHOI 408 - 14084 16245 0 6 258,131,156,733,636,156, 0,270,434,602,1349,2005, -,-,-,-,-,-, 612698 Satellite W-chromosome 585 chrUn_NT_464913v1 16340 19949 GGXHOI 387 - 16340 19949 0 7 877,244,335,130,725,959,197, 0,892,1150,1508,1655,2392,3412, -,-,-,-,-,-,-, 612699 Satellite W-chromosome 585 chrUn_NT_464913v1 20057 20773 GGXHOI 387 - 20057 20773 0 3 223,156,285, 0,263,431, -,-,-, 612700 Satellite W-chromosome 585 chrUn_NT_464915v1 1260 2627 (CGAGG)n 528 + 1260 2627 0 5 330,178,150,126,343, 0,355,546,883,1024, +,+,+,+,+, 612709 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 2963 3248 (CGAGG)n 572 + 2963 3248 0 2 86,182, 0,103, +,+, 612713 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 3472 4358 (CGAGG)n 513 + 3472 4358 0 2 635,240, 0,646, +,+, 612716 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 5259 5661 (CGAGG)n 491 + 5259 5661 0 2 180,222, 0,180, +,+, 612721 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 6528 7612 (CGAGG)n 572 + 6528 7612 0 5 176,239,179,176,185, 0,193,452,686,899, +,+,+,+,+, 612725 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 9280 9668 (CGAGG)n 519 + 9280 9668 0 2 179,179, 0,209, +,+, 612733 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 10149 11354 (CGAGG)n 535 + 10149 11354 0 3 182,184,799, 0,197,406, +,+,+, 612736 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 11826 13108 (CGAGG)n 512 + 11826 13108 0 2 497,462, 0,820, +,+, 612740 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 13530 14354 (CGAGG)n 529 + 13530 14354 0 3 399,177,190, 0,457,634, +,+,+, 612745 Simple_repeat Simple_repeat 585 chrUn_NT_464915v1 15561 16134 (CGAGG)n 534 + 15561 16134 0 2 335,176, 0,397, +,+, 612755 Simple_repeat Simple_repeat 585 chrUn_NT_464916v1 19035 19198 (GAGTG)n 184 + 19035 19198 0 2 82,32, 0,131, +,+, 612839 Simple_repeat Simple_repeat 585 chrUn_NT_464917v1 3912 8290 GGXHOI 375 - 3912 8290 0 4 1083,1684,1114,386, 0,1104,2850,3992, -,-,-,-, 612849 Satellite W-chromosome 585 chrUn_NT_464917v1 9524 12400 GGXHOI 399 - 9524 12400 0 3 338,1321,1138, 0,355,1738, -,-,-, 612852 Satellite W-chromosome 585 chrUn_NT_464917v1 12518 21349 GGXHOI 387 - 12518 21349 0 3 3486,2224,3019, 0,3526,5812, -,-,-, 612853 Satellite W-chromosome 585 chrUn_NT_464918v1 16102 18271 CR1-C 848 - 16102 18271 0 2 624,1545, 0,624, -,-, 612864 LINE CR1 585 chrUn_NT_464918v1 20459 21350 GGLTR7B 467 - 20459 21350 0 2 111,306, 0,585, -,-, 612868 LTR ERV1 585 chrUn_NT_464919v1 19358 20106 CR1-F 288 + 19358 20106 0 2 176,572, 0,176, +,+, 612881 LINE CR1 585 chrUn_NT_464920v1 1702 2782 GGXHOI 471 - 1702 2782 0 3 613,107,124, 0,832,956, -,-,-, 612884 Satellite W-chromosome 585 chrUn_NT_464920v1 3104 4338 Sat-CR1_GG 176 - 3104 4338 0 2 551,183, 0,1051, -,-, 612886 Satellite Satellite 585 chrUn_NT_464920v1 4184 7603 GGXHOI 562 - 4184 7603 0 5 162,54,112,265,748, 0,201,1102,1818,2671, -,-,-,-,-, 612888 Satellite W-chromosome 585 chrUn_NT_464920v1 10899 12825 GGXHOI 524 - 10899 12825 0 4 491,430,196,56, 0,806,1276,1870, -,-,-,-, 612895 Satellite W-chromosome 585 chrUn_NT_464920v1 12859 18663 Sat-CR1_GG 162 - 12859 18663 0 4 12,43,18,43, 0,2911,3617,5761, -,-,-,-, 612897 Satellite Satellite 585 chrUn_NT_464920v1 16494 18620 GGXHOI 586 - 16494 18620 0 2 781,1027, 0,1099, -,-, 612900 Satellite W-chromosome 585 chrUn_NT_464920v1 18663 21362 GGXHOI 574 - 18663 21362 0 2 1481,898, 0,1801, -,-, 612901 Satellite W-chromosome 585 chrUn_NT_464921v1 6449 7212 Sat-CR1_GG 186 - 6449 7212 0 2 60,42, 0,721, -,-, 612910 Satellite Satellite 585 chrUn_NT_464921v1 7222 8847 GGXHOI 565 - 7222 8847 0 4 162,365,23,628, 0,177,912,997, -,-,-,-, 612912 Satellite W-chromosome 585 chrUn_NT_464921v1 8886 10157 GGXHOI 592 - 8886 10157 0 2 569,242, 0,1029, -,-, 612915 Satellite W-chromosome 585 chrUn_NT_464921v1 10875 12413 GGXHOI 601 - 10875 12413 0 3 407,236,148, 0,1143,1390, -,-,-, 612918 Satellite W-chromosome 585 chrUn_NT_464921v1 13137 16486 GGXHOI 600 - 13137 16486 0 3 407,570,1251, 0,966,2098, -,-,-, 612921 Satellite W-chromosome 585 chrUn_NT_464921v1 16527 20443 GGXHOI 583 - 16527 20443 0 6 406,276,148,692,235,284, 0,1095,1382,2085,3386,3632, -,-,-,-,-,-, 612925 Satellite W-chromosome 585 chrUn_NT_464922v1 7235 8064 GGXHOI 366 - 7235 8064 0 2 640,146, 0,683, -,-, 612941 Satellite W-chromosome 585 chrUn_NT_464922v1 9381 10824 GGXHOI 383 - 9381 10824 0 2 996,384, 0,1059, -,-, 612943 Satellite W-chromosome 585 chrUn_NT_464922v1 11008 11970 GGXHOI 381 - 11008 11970 0 2 514,385, 0,577, -,-, 612944 Satellite W-chromosome 585 chrUn_NT_464922v1 12153 13199 GGXHOI 367 - 12153 13199 0 2 515,469, 0,577, -,-, 612945 Satellite W-chromosome 585 chrUn_NT_464922v1 19284 20166 GGXHOI 317 - 19284 20166 0 3 272,210,308, 0,331,574, -,-,-, 612952 Satellite W-chromosome 585 chrUn_NT_464922v1 20309 21219 GGXHOI 329 - 20309 21219 0 2 379,470, 0,440, -,-, 612953 Satellite W-chromosome 585 chrUn_NT_464923v1 3950 5067 GGXHOI 347 + 3950 5067 0 2 389,707, 0,410, +,+, 612955 Satellite W-chromosome 585 chrUn_NT_464923v1 5569 8493 GGXHOI 353 - 5569 8493 0 4 142,552,266,1901, 0,163,736,1023, -,-,-,-, 612956 Satellite W-chromosome 585 chrUn_NT_464923v1 8843 10662 GGXHOI 330 - 8843 10662 0 3 263,393,1083, 0,322,736, -,-,-, 612957 Satellite W-chromosome 585 chrUn_NT_464923v1 14772 15975 GGXHOI 343 - 14772 15975 0 2 592,590, 0,613, -,-, 612961 Satellite W-chromosome 585 chrUn_NT_464923v1 16525 18179 GGXHOI 347 - 16525 18179 0 3 1069,175,334, 0,1131,1320, -,-,-, 612963 Satellite W-chromosome 585 chrUn_NT_464923v1 18445 20176 GGXHOI 337 - 18445 20176 0 5 149,309,272,267,576, 0,206,533,826,1155, -,-,-,-,-, 612964 Satellite W-chromosome 585 chrUn_NT_464925v1 241 4470 GGXHOI 550 - 241 4470 0 5 163,278,571,276,1643, 0,816,1344,1933,2586, -,-,-,-,-, 612970 Satellite W-chromosome 585 chrUn_NT_464925v1 4494 7239 GGXHOI 538 - 4494 7239 0 2 1355,914, 0,1831, -,-, 612975 Satellite W-chromosome 585 chrUn_NT_464925v1 10908 18750 GGXHOI 535 - 10908 18750 0 8 315,327,123,104,203,26,184,161, 0,812,2218,5891,6826,7382,7442,7681, -,-,-,-,-,-,-,-, 612982 Satellite W-chromosome 585 chrUn_NT_464925v1 19469 21017 GGXHOI 541 - 19469 21017 0 2 1015,503, 0,1045, -,-, 612990 Satellite W-chromosome 585 chrUn_NT_464926v1 3507 3646 GA-rich 290 + 3507 3646 0 2 43,62, 0,77, +,+, 612999 Low_complexity Low_complexity 585 chrUn_NT_464926v1 6606 6749 GA-rich 278 + 6606 6749 0 2 43,66, 0,77, +,+, 613004 Low_complexity Low_complexity 585 chrUn_NT_464926v1 9673 9815 GA-rich 270 + 9673 9815 0 2 42,67, 0,75, +,+, 613010 Low_complexity Low_complexity 585 chrUn_NT_464926v1 15851 15993 GA-rich 296 + 15851 15993 0 2 43,66, 0,76, +,+, 613021 Low_complexity Low_complexity 585 chrUn_NT_464927v1 5409 8474 GGXHOI 417 - 5409 8474 0 4 672,1045,1126,162, 0,692,1757,2903, -,-,-,-, 613031 Satellite W-chromosome 585 chrUn_NT_464927v1 8676 19952 GGXHOI 400 - 8676 19952 0 14 286,124,1062,146,1140,1048,1108,223,2055,1144,1139,394,725,389, 0,337,480,1555,1718,2873,3941,5093,5334,7409,8573,9732,10142,10887, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 613032 Satellite W-chromosome 585 chrUn_NT_464927v1 20052 21329 GGXHOI 408 - 20052 21329 0 4 158,560,343,148, 0,202,774,1129, -,-,-,-, 613033 Satellite W-chromosome 585 chrUn_NT_464929v1 2439 4098 GGXHOI 389 - 2439 4098 0 2 1269,328, 0,1331, -,-, 613047 Satellite W-chromosome 585 chrUn_NT_464929v1 4569 6996 GGXHOI 381 - 4569 6996 0 2 889,1476, 0,951, -,-, 613050 Satellite W-chromosome 585 chrUn_NT_464929v1 7283 10155 GGXHOI 331 - 7283 10155 0 3 867,786,1186, 0,883,1686, -,-,-, 613051 Satellite W-chromosome 585 chrUn_NT_464929v1 10344 17628 GGXHOI 356 - 10344 17628 0 6 526,1660,1443,809,1728,941, 0,588,2310,3774,4599,6343, -,-,-,-,-,-, 613052 Satellite W-chromosome 585 chrUn_NT_464929v1 18213 19528 GGXHOI 379 - 18213 19528 0 2 375,887, 0,428, -,-, 613055 Satellite W-chromosome 585 chrUn_NT_464929v1 20711 21305 GGXHOI 361 - 20711 21305 0 2 227,348, 0,246, -,-, 613061 Satellite W-chromosome 585 chrUn_NT_464930v1 15979 16436 CR1-H 677 + 15979 16436 0 2 296,161, 0,296, +,+, 613078 LINE CR1 585 chrUn_NT_464930v1 19248 19869 CR1-H 681 + 19248 19869 0 2 476,139, 0,482, +,+, 613082 LINE CR1 585 chrUn_NT_464932v1 5874 9630 GGLTR7-int 228 - 5874 9630 0 5 97,349,460,238,326, 0,285,1144,2277,3430, -,-,-,-,-, 613094 LTR ERV1 585 chrUn_NT_464932v1 16064 16524 CR1-X2 376 - 16064 16524 0 2 155,234, 0,226, -,-, 613099 LINE CR1 585 chrUn_NT_464933v1 1576 13890 GGXHOI 403 - 1576 13890 0 13 205,691,144,403,1228,1925,1432,1281,767,1304,1270,976,446, 0,218,930,1091,1511,2762,4703,6151,7479,8264,9590,10874,11868, -,-,-,-,-,-,-,-,-,-,-,-,-, 613106 Satellite W-chromosome 585 chrUn_NT_464933v1 13981 21229 GGXHOI 399 - 13981 21229 0 6 1678,522,1099,275,1675,1866, 0,1695,2234,3349,3645,5382, -,-,-,-,-,-, 613107 Satellite W-chromosome 585 chrUn_NT_464934v1 1024 1833 (CCTCG)n 560 + 1024 1833 0 2 330,433, 0,376, +,+, 613109 Simple_repeat Simple_repeat 585 chrUn_NT_464934v1 2119 3074 (CCTCG)n 506 + 2119 3074 0 2 385,549, 0,406, +,+, 613113 Simple_repeat Simple_repeat 585 chrUn_NT_464934v1 3139 4421 (CCTCG)n 526 + 3139 4421 0 2 908,363, 0,919, +,+, 613115 Simple_repeat Simple_repeat 585 chrUn_NT_464934v1 4899 6982 (CCTCG)n 568 + 4899 6982 0 5 423,43,180,705,152, 0,605,673,868,1931, +,+,+,+,+, 613119 Simple_repeat Simple_repeat 585 chrUn_NT_464934v1 7056 9269 GGLTR10D-int 924 + 7056 9269 0 2 1846,364, 0,1849, +,+, 613125 LTR ERVK 585 chrUn_NT_464934v1 9452 11902 GGLTR7-int 596 - 9452 11902 0 2 792,338, 0,2112, -,-, 613126 LTR ERV1 585 chrUn_NT_464935v1 7803 12353 CR1-D2 517 + 7803 12353 0 3 105,549,572, 0,110,3978, +,+,+, 613142 LINE CR1 585 chrUn_NT_464935v1 8448 11096 CR1-D 661 + 8448 11096 0 3 110,899,1639, 0,110,1009, +,+,+, 613143 LINE CR1 585 chrUn_NT_464936v1 1275 2123 (CGAGG)n 542 + 1275 2123 0 2 96,575, 0,273, +,+, 613151 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 3281 4790 (CGAGG)n 546 + 3281 4790 0 5 216,344,236,451,31, 0,397,741,1012,1478, +,+,+,+,+, 613158 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 4834 5895 (CGAGG)n 550 + 4834 5895 0 2 511,501, 0,560, +,+, 613161 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 6208 6874 (CGAGG)n 568 + 6208 6874 0 4 149,24,178,100, 0,333,375,566, +,+,+,+, 613163 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 7686 9457 (CCTCG)n 598 + 7686 9457 0 2 187,1400, 0,371, +,+, 613167 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 9131 9484 (CCTTG)n 528 + 9131 9484 0 2 119,54, 0,299, +,+, 613169 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 9442 11862 (CCTCG)n 622 + 9442 11862 0 7 226,152,194,282,143,29,467, 0,405,557,783,1243,1568,1953, +,+,+,+,+,+,+, 613171 Simple_repeat Simple_repeat 585 chrUn_NT_464936v1 11862 14290 GGERV10_LTR 874 + 11862 14290 0 2 41,38, 0,2390, +,+, 613176 LTR ERVL 585 chrUn_NT_464936v1 11904 14120 GGLTR10D-int 922 + 11904 14120 0 2 1849,364, 0,1852, +,+, 613177 LTR ERVK 585 chrUn_NT_464936v1 14302 16755 GGLTR7-int 594 - 14302 16755 0 2 793,342, 0,2111, -,-, 613178 LTR ERV1 585 chrUn_NT_464936v1 20623 20966 G-rich 413 + 20623 20966 0 2 38,258, 0,85, +,+, 613183 Low_complexity Low_complexity 585 chrUn_NT_464937v1 8541 9399 (ACCCCATAGGG)n 486 - 8541 9399 0 5 148,115,162,112,276, 0,170,285,459,582, -,-,-,-,-, 613191 Satellite Satellite 585 chrUn_NT_464937v1 9946 10282 (ACCCCATAGGG)n 559 - 9946 10282 0 2 140,193, 0,143, -,-, 613194 Satellite Satellite 585 chrUn_NT_464937v1 10955 11524 (ACCCATAGAG)n 542 - 10955 11524 0 2 394,34, 0,535, -,-, 613200 Satellite Satellite 585 chrUn_NT_464937v1 11532 12498 (ACCCCATAGGG)n 593 - 11532 12498 0 4 134,239,110,313, 0,161,543,653, -,-,-,-, 613202 Satellite Satellite 585 chrUn_NT_464939v1 5392 6529 CR1-B2 609 - 5392 6529 0 2 899,235, 0,902, -,-, 613221 LINE CR1 585 chrUn_NT_464939v1 12003 13170 CR1-X 459 - 12003 13170 0 3 78,172,89, 0,78,1078, -,-,-, 613227 LINE CR1 585 chrUn_NT_464939v1 18859 19887 CR1-B2 526 + 18859 19887 0 2 202,793, 0,235, +,+, 613229 LINE CR1 585 chrUn_NT_464940v1 11566 12690 CR1-B2 690 + 11566 12690 0 2 225,896, 0,228, +,+, 613238 LINE CR1 585 chrUn_NT_464940v1 18865 19440 CR1-X 355 + 18865 19440 0 3 176,126,220, 0,186,355, +,+,+, 613247 LINE CR1 585 chrUn_NT_464941v1 11842 12256 CR1-H 732 + 11842 12256 0 2 104,310, 0,104, +,+, 613259 LINE CR1 585 chrUn_NT_464942v1 1286 1988 (CCTTG)n 528 + 1286 1988 0 3 227,188,77, 0,251,625, +,+,+, 613270 Simple_repeat Simple_repeat 585 chrUn_NT_464942v1 2804 3830 (CAAGG)n 491 + 2804 3830 0 4 500,178,90,26, 0,528,725,1000, +,+,+,+, 613273 Simple_repeat Simple_repeat 585 chrUn_NT_464942v1 3886 4669 (CCTTG)n 473 + 3886 4669 0 2 201,548, 0,235, +,+, 613275 Simple_repeat Simple_repeat 585 chrUn_NT_464942v1 8305 9266 GGXHOI 378 - 8305 9266 0 2 513,385, 0,576, -,-, 613282 Satellite W-chromosome 585 chrUn_NT_464942v1 10103 12212 GGXHOI 378 - 10103 12212 0 2 1011,1035, 0,1074, -,-, 613284 Satellite W-chromosome 585 chrUn_NT_464943v1 18518 20358 GGXHOI 397 + 18518 20358 0 3 671,841,293, 0,683,1547, +,+,+, 613297 Satellite W-chromosome 585 chrUn_NT_464944v1 194 805 CR1-H 403 + 194 805 0 2 200,377, 0,234, +,+, 613301 LINE CR1 585 chrUn_NT_464944v1 2685 3309 CR1-H 378 + 2685 3309 0 2 209,379, 0,245, +,+, 613304 LINE CR1 585 chrUn_NT_464944v1 9954 11099 CR1-C2 572 - 9954 11099 0 2 75,133, 0,1012, -,-, 613312 LINE CR1 585 chrUn_NT_464944v1 11117 11741 CR1-H 378 + 11117 11741 0 2 209,379, 0,245, +,+, 613314 LINE CR1 585 chrUn_NT_464944v1 13622 14246 CR1-H 378 + 13622 14246 0 2 209,379, 0,245, +,+, 613317 LINE CR1 585 chrUn_NT_464944v1 16127 16751 CR1-H 378 + 16127 16751 0 2 209,379, 0,245, +,+, 613320 LINE CR1 585 chrUn_NT_464944v1 18632 19256 CR1-H 378 + 18632 19256 0 2 209,379, 0,245, +,+, 613323 LINE CR1 585 chrUn_NT_464945v1 8504 21188 GGXHOI 407 + 8504 21188 0 10 701,722,308,751,1729,370,359,2580,2585,2329, 0,724,1461,1792,2566,4311,4732,5114,7755,10355, +,+,+,+,+,+,+,+,+,+, 613329 Satellite W-chromosome 585 chrUn_NT_464946v1 19406 19774 GGLTR7B 291 - 19406 19774 0 2 236,106, 0,262, -,-, 613347 LTR ERV1 585 chrUn_NT_464948v1 518 19510 Sat-CR1_GG 176 + 518 19510 0 3 2724,116,7179, 0,10193,11813, +,+,+, 613356 Satellite Satellite 585 chrUn_NT_464948v1 3242 10711 GGXHOI 582 + 3242 10711 0 4 3312,2065,641,488, 0,3634,6020,6981, +,+,+,+, 613357 Satellite W-chromosome 585 chrUn_NT_464948v1 10827 12331 GGXHOI 588 + 10827 12331 0 2 654,529, 0,975, +,+, 613358 Satellite W-chromosome 585 chrUn_NT_464948v1 12374 19770 GGXHOI 580 + 12374 19770 0 6 243,3180,641,393,641,467, 0,545,4046,5257,5970,6929, +,+,+,+,+,+, 613359 Satellite W-chromosome 585 chrUn_NT_464948v1 16099 19303 Sat-CR1_GG 222 + 16099 19303 0 4 321,570,320,318, 0,962,1925,2886, +,+,+,+, 613361 Satellite Satellite 585 chrUn_NT_464948v1 19815 21172 GGXHOI 506 + 19815 21172 0 2 363,586, 0,771, +,+, 613363 Satellite W-chromosome 585 chrUn_NT_464949v1 4143 4330 CR1-E 573 + 4143 4330 0 2 55,58, 0,129, +,+, 613373 LINE CR1 585 chrUn_NT_464949v1 10466 10653 CR1-C4 619 + 10466 10653 0 2 55,58, 0,129, +,+, 613385 LINE CR1 585 chrUn_NT_464949v1 16780 16967 CR1-E 654 + 16780 16967 0 2 55,58, 0,129, +,+, 613396 LINE CR1 585 chrUn_NT_464950v1 987 1768 (CAAGG)n 539 + 987 1768 0 2 184,543, 0,238, +,+, 613405 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 1820 2914 (CCTTG)n 501 + 1820 2914 0 3 480,339,76, 0,508,1018, +,+,+, 613406 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 3482 4343 (CAAGG)n 495 + 3482 4343 0 3 193,374,234, 0,236,627, +,+,+, 613409 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 4766 5414 (CCTTG)n 515 + 4766 5414 0 3 295,112,54, 0,312,594, +,+,+, 613413 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 5669 6162 (CCTTG)n 478 + 5669 6162 0 2 242,224, 0,269, +,+, 613417 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 6586 6955 (CAAGG)n 508 + 6586 6955 0 2 139,49, 0,320, +,+, 613421 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 7022 7535 (CAAGG)n 570 + 7022 7535 0 2 161,85, 0,428, +,+, 613423 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 8250 8739 (CCTTG)n 482 + 8250 8739 0 2 240,223, 0,266, +,+, 613426 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 9598 10111 (CAAGG)n 570 + 9598 10111 0 2 161,85, 0,428, +,+, 613433 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 10110 10533 (CCTTG)n 489 + 10110 10533 0 2 174,223, 0,200, +,+, 613435 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 10961 11847 (CAAGG)n 495 + 10961 11847 0 3 193,374,259, 0,236,627, +,+,+, 613440 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 11895 12743 (CCTTG)n 519 + 11895 12743 0 3 59,404,54, 0,108,794, +,+,+, 613441 Simple_repeat Simple_repeat 585 chrUn_NT_464950v1 19782 21155 GGXHOI 363 - 19782 21155 0 2 1170,179, 0,1194, -,-, 613453 Satellite W-chromosome 585 chrUn_NT_464951v1 4448 4647 CR1-X 437 - 4448 4647 0 2 153,46, 0,153, -,-, 613458 LINE CR1 585 chrUn_NT_464951v1 11311 12321 CR1-B2 699 - 11311 12321 0 2 783,224, 0,786, -,-, 613469 LINE CR1 585 chrUn_NT_464952v1 11632 13884 GGXHOI 538 - 11632 13884 0 2 658,944, 0,1308, -,-, 613489 Satellite W-chromosome 585 chrUn_NT_464952v1 13927 17066 GGXHOI 550 - 13927 17066 0 2 1616,862, 0,2277, -,-, 613492 Satellite W-chromosome 585 chrUn_NT_464952v1 17081 18798 GGXHOI 536 - 17081 18798 0 2 1022,54, 0,1663, -,-, 613495 Satellite W-chromosome 585 chrUn_NT_464952v1 18826 21149 GGXHOI 528 - 18826 21149 0 4 234,147,162,86, 0,1137,1326,2237, -,-,-,-, 613498 Satellite W-chromosome 585 chrUn_NT_464953v1 10943 11250 CR1-X 454 - 10943 11250 0 3 57,77,170, 0,60,137, -,-,-, 613512 LINE CR1 585 chrUn_NT_464954v1 9213 9872 GGLTR11-int 505 + 9213 9872 0 2 125,222, 0,437, +,+, 613527 LTR ERV1 585 chrUn_NT_464955v1 4432 5474 GGXHOI 590 + 4432 5474 0 2 360,494, 0,548, +,+, 613541 Satellite W-chromosome 585 chrUn_NT_464955v1 7830 15686 GGXHOI 588 + 7830 15686 0 2 7174,494, 0,7362, +,+, 613546 Satellite W-chromosome 585 chrUn_NT_464955v1 16348 17390 GGXHOI 590 + 16348 17390 0 2 360,494, 0,548, +,+, 613549 Satellite W-chromosome 585 chrUn_NT_464955v1 18052 19094 GGXHOI 590 + 18052 19094 0 2 360,494, 0,548, +,+, 613552 Satellite W-chromosome 585 chrUn_NT_464957v1 9730 11572 Sat-CR1_GG 216 - 9730 11572 0 2 803,701, 0,1141, -,-, 613579 Satellite Satellite 585 chrUn_NT_464957v1 11710 13552 Sat-CR1_GG 216 - 11710 13552 0 2 803,701, 0,1141, -,-, 613582 Satellite Satellite 585 chrUn_NT_464957v1 13690 15532 Sat-CR1_GG 216 - 13690 15532 0 2 803,701, 0,1141, -,-, 613585 Satellite Satellite 585 chrUn_NT_464957v1 16794 18948 Sat-CR1_GG 196 - 16794 18948 0 2 1120,697, 0,1457, -,-, 613591 Satellite Satellite 585 chrUn_NT_464958v1 6523 7957 GGXHOI 376 - 6523 7957 0 3 563,224,620, 0,575,814, -,-,-, 613601 Satellite W-chromosome 585 chrUn_NT_464958v1 8052 11242 GGXHOI 396 - 8052 11242 0 6 739,195,537,238,892,376, 0,761,1018,1610,1907,2814, -,-,-,-,-,-, 613602 Satellite W-chromosome 585 chrUn_NT_464958v1 11383 12971 GGXHOI 333 - 11383 12971 0 2 1426,145, 0,1443, -,-, 613603 Satellite W-chromosome 585 chrUn_NT_464958v1 13059 14807 GGXHOI 364 - 13059 14807 0 2 480,1240, 0,508, -,-, 613604 Satellite W-chromosome 585 chrUn_NT_464958v1 14979 18438 GGXHOI 390 - 14979 18438 0 9 468,388,326,461,471,409,419,56,172, 0,512,948,1317,1822,2314,2784,3218,3287, -,-,-,-,-,-,-,-,-, 613605 Satellite W-chromosome 585 chrUn_NT_464958v1 18593 20929 GGXHOI 303 - 18593 20929 0 2 177,2115, 0,221, -,-, 613606 Satellite W-chromosome 585 chrUn_NT_464959v1 391 981 GGXHOI 550 - 391 981 0 2 154,202, 0,388, -,-, 613609 Satellite W-chromosome 585 chrUn_NT_464959v1 2094 3189 GGXHOI 536 - 2094 3189 0 2 510,375, 0,720, -,-, 613612 Satellite W-chromosome 585 chrUn_NT_464959v1 3481 4277 GGXHOI 525 - 3481 4277 0 3 146,180,202, 0,163,594, -,-,-, 613615 Satellite W-chromosome 585 chrUn_NT_464959v1 4346 5361 GGXHOI 524 - 4346 5361 0 3 16,277,210, 0,213,805, -,-,-, 613617 Satellite W-chromosome 585 chrUn_NT_464959v1 5646 6481 GGXHOI 482 - 5646 6481 0 2 368,421, 0,414, -,-, 613621 Satellite W-chromosome 585 chrUn_NT_464959v1 6767 7573 GGXHOI 542 - 6767 7573 0 2 337,458, 0,348, -,-, 613623 Satellite W-chromosome 585 chrUn_NT_464959v1 7987 9370 GGXHOI 549 - 7987 9370 0 3 109,724,336, 0,127,1047, -,-,-, 613625 Satellite W-chromosome 585 chrUn_NT_464959v1 10125 12091 GGXHOI 553 - 10125 12091 0 3 331,546,799, 0,342,1167, -,-,-, 613630 Satellite W-chromosome 585 chrUn_NT_464959v1 13463 17543 GGXHOI 512 - 13463 17543 0 5 186,612,623,17,1941, 0,581,1233,1926,2139, -,-,-,-,-, 613637 Satellite W-chromosome 585 chrUn_NT_464959v1 17611 18617 GGXHOI 514 - 17611 18617 0 3 17,267,289, 0,213,717, -,-,-, 613640 Satellite W-chromosome 585 chrUn_NT_464959v1 18695 20698 GGXHOI 421 - 18695 20698 0 6 13,391,574,393,204,130, 0,204,614,1217,1658,1873, -,-,-,-,-,-, 613643 Satellite W-chromosome 585 chrUn_NT_464960v1 13032 13511 GGERVL-C-int 805 - 13032 13511 0 2 435,44, 0,435, -,-, 613657 LTR ERVL 585 chrUn_NT_464960v1 16580 20970 GGERV28_I-int 852 - 16580 20970 0 3 479,294,879, 0,479,3511, -,-,-, 613659 LTR ERVK 585 chrUn_NT_464960v1 17809 18655 GGLTR7-int 805 - 17809 18655 0 3 347,266,212, 0,347,634, -,-,-, 613660 LTR ERV1 585 chrUn_NT_464961v1 593 781 CR1-H 602 + 593 781 0 2 65,115, 0,73, +,+, 613664 LINE CR1 585 chrUn_NT_464961v1 779 1619 Z-REP 532 + 779 1619 0 2 441,315, 0,525, +,+, 613665 Satellite macro 585 chrUn_NT_464961v1 6042 8004 GGLTR7-int 489 - 6042 8004 0 2 64,1238, 0,724, -,-, 613669 LTR ERV1 585 chrUn_NT_464963v1 12225 18618 Charlie12_GG 534 - 12225 18618 0 2 66,67, 0,6326, -,-, 613715 DNA hAT-Charlie 585 chrUn_NT_464964v1 393 1096 (CGAGG)n 544 + 393 1096 0 2 174,483, 0,220, +,+, 613732 Simple_repeat Simple_repeat 585 chrUn_NT_464964v1 8067 8766 (CGAGG)n 502 + 8067 8766 0 2 172,485, 0,214, +,+, 613763 Simple_repeat Simple_repeat 585 chrUn_NT_464964v1 8874 9240 (CGAGG)n 463 + 8874 9240 0 2 175,179, 0,187, +,+, 613765 Simple_repeat Simple_repeat 585 chrUn_NT_464964v1 10775 11177 (CGAGG)n 519 + 10775 11177 0 2 176,205, 0,197, +,+, 613772 Simple_repeat Simple_repeat 585 chrUn_NT_464964v1 11387 12579 (CGAGG)n 482 + 11387 12579 0 2 980,186, 0,1006, +,+, 613774 Simple_repeat Simple_repeat 585 chrUn_NT_464964v1 14230 15086 (CGAGG)n 483 + 14230 15086 0 2 662,177, 0,679, +,+, 613781 Simple_repeat Simple_repeat 585 chrUn_NT_464964v1 18669 19088 G-rich 295 + 18669 19088 0 2 216,171, 0,248, +,+, 613797 Low_complexity Low_complexity 585 chrUn_NT_464965v1 4171 6940 Sat-CR1_GG 156 - 4171 6940 0 2 551,925, 0,1844, -,-, 613813 Satellite Satellite 585 chrUn_NT_464965v1 6089 7314 GGXHOI 478 - 6089 7314 0 3 476,126,88, 0,794,1137, -,-,-, 613815 Satellite W-chromosome 585 chrUn_NT_464965v1 7377 11989 GGXHOI 548 - 7377 11989 0 5 481,324,61,361,709, 0,1559,2403,3063,3903, -,-,-,-,-, 613818 Satellite W-chromosome 585 chrUn_NT_464965v1 12043 13091 GGXHOI 450 - 12043 13091 0 2 27,634, 0,414, -,-, 613824 Satellite W-chromosome 585 chrUn_NT_464965v1 13133 18325 GGXHOI 548 - 13133 18325 0 5 904,333,315,165,1016, 0,1486,2367,3458,4176, -,-,-,-,-, 613827 Satellite W-chromosome 585 chrUn_NT_464965v1 18356 21047 GGXHOI 576 - 18356 21047 0 2 481,12, 0,2679, -,-, 613833 Satellite W-chromosome 585 chrUn_NT_464966v1 8123 9493 GGXHOI 373 - 8123 9493 0 3 714,103,470, 0,734,900, -,-,-, 613845 Satellite W-chromosome 585 chrUn_NT_464966v1 10914 11400 GGXHOI 385 - 10914 11400 0 2 90,381, 0,105, -,-, 613849 Satellite W-chromosome 585 chrUn_NT_464967v1 345 815 CR1-H 357 - 345 815 0 2 226,208, 0,262, -,-, 613865 LINE CR1 585 chrUn_NT_464967v1 2696 3320 CR1-H 378 - 2696 3320 0 2 379,209, 0,415, -,-, 613868 LINE CR1 585 chrUn_NT_464967v1 5202 5826 CR1-H 378 - 5202 5826 0 2 379,209, 0,415, -,-, 613871 LINE CR1 585 chrUn_NT_464967v1 7708 8332 CR1-H 378 - 7708 8332 0 2 379,209, 0,415, -,-, 613874 LINE CR1 585 chrUn_NT_464967v1 10213 10837 CR1-H 378 - 10213 10837 0 2 379,209, 0,415, -,-, 613877 LINE CR1 585 chrUn_NT_464967v1 12718 13342 CR1-H 378 - 12718 13342 0 2 379,209, 0,415, -,-, 613880 LINE CR1 585 chrUn_NT_464967v1 15223 15847 CR1-H 378 - 15223 15847 0 2 379,209, 0,415, -,-, 613883 LINE CR1 585 chrUn_NT_464967v1 17728 18351 CR1-H 372 - 17728 18351 0 2 379,208, 0,415, -,-, 613886 LINE CR1 585 chrUn_NT_464967v1 20188 20719 CR1-H 352 - 20188 20719 0 2 306,196, 0,335, -,-, 613889 LINE CR1 585 chrUn_NT_464968v1 12480 12721 Char12Mar1_GG 494 - 12480 12721 0 2 71,170, 0,71, -,-, 613901 DNA hAT-Charlie 585 chrUn_NT_464969v1 162 564 (CCTCG)n 538 + 162 564 0 2 179,175, 0,227, +,+, 613906 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 621 1334 (CCTCG)n 538 + 621 1334 0 2 445,227, 0,486, +,+, 613908 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 1860 3327 (CCTCG)n 509 + 1860 3327 0 3 351,771,150, 0,369,1317, +,+,+, 613912 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 3415 4647 (CCTCG)n 532 + 3415 4647 0 5 226,176,176,172,352, 0,285,494,694,880, +,+,+,+,+, 613914 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 5375 6658 (CCTCG)n 363 + 5375 6658 0 3 779,107,309, 0,807,974, +,+,+, 613918 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 6697 7568 (CCTCG)n 515 + 6697 7568 0 3 344,257,71, 0,368,800, +,+,+, 613921 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 7649 9794 (CCTCG)n 538 + 7649 9794 0 4 834,184,410,517, 0,851,1209,1628, +,+,+,+, 613923 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 10341 10642 (CCTCG)n 560 + 10341 10642 0 2 89,32, 0,269, +,+, 613929 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 13438 13835 (CCTCG)n 547 + 13438 13835 0 2 183,179, 0,218, +,+, 613941 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 14643 15572 (CCTCG)n 530 + 14643 15572 0 3 177,320,232, 0,198,697, +,+,+, 613945 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 15443 15791 (CCCCG)n 533 + 15443 15791 0 2 155,179, 0,169, +,+, 613947 Simple_repeat Simple_repeat 585 chrUn_NT_464969v1 16134 18559 GGERV10_LTR 848 + 16134 18559 0 2 41,38, 0,2387, +,+, 613949 LTR ERVL 585 chrUn_NT_464969v1 16176 18391 GGLTR10D-int 924 + 16176 18391 0 2 1848,364, 0,1851, +,+, 613950 LTR ERVK 585 chrUn_NT_464969v1 18571 20995 GGLTR7-int 608 - 18571 20995 0 3 789,854,335, 0,797,2089, -,-,-, 613951 LTR ERV1 585 chrUn_NT_464970v1 6830 7238 (ACCCCATAGGG)n 223 + 6830 7238 0 2 148,203, 0,205, +,+, 613957 Satellite Satellite 585 chrUn_NT_464971v1 11143 11811 CR1-Y2_Aves 287 - 11143 11811 0 3 89,235,193, 0,188,475, -,-,-, 613973 LINE CR1 585 chrUn_NT_464971v1 14496 15174 CR1-Y2_Aves 254 - 14496 15174 0 2 387,291, 0,387, -,-, 613976 LINE CR1 585 chrUn_NT_464971v1 18581 18889 GGLTR3F2 725 + 18581 18889 0 2 50,251, 0,57, +,+, 613977 LTR ERVL 585 chrUn_NT_464972v1 7548 10006 GGLTR7-int 602 + 7548 10006 0 2 338,793, 0,1665, +,+, 613998 LTR ERV1 585 chrUn_NT_464972v1 10018 12433 GGERV10_LTR 874 - 10018 12433 0 2 38,41, 0,2374, -,-, 614001 LTR ERVL 585 chrUn_NT_464972v1 10184 12391 GGLTR10D-int 918 - 10184 12391 0 2 364,1840, 0,367, -,-, 614002 LTR ERVK 585 chrUn_NT_464972v1 13052 14055 (CGAGG)n 533 + 13052 14055 0 4 358,178,181,206, 0,419,616,797, +,+,+,+, 614006 Simple_repeat Simple_repeat 585 chrUn_NT_464972v1 14278 14978 (CGAGG)n 538 + 14278 14978 0 3 199,46,262, 0,379,438, +,+,+, 614008 Simple_repeat Simple_repeat 585 chrUn_NT_464972v1 15104 16592 (CGAGG)n 457 + 15104 16592 0 3 183,1098,20, 0,194,1468, +,+,+, 614010 Simple_repeat Simple_repeat 585 chrUn_NT_464972v1 18383 19015 (CGAGG)n 488 + 18383 19015 0 2 196,260, 0,372, +,+, 614025 Simple_repeat Simple_repeat 585 chrUn_NT_464972v1 20146 20835 (CGAGG)n 492 + 20146 20835 0 2 221,294, 0,395, +,+, 614028 Simple_repeat Simple_repeat 585 chrUn_NT_464974v1 945 1862 (ACCCATAGAG)n 713 + 945 1862 0 4 297,113,20,370, 0,297,527,547, +,+,+,+, 614037 Satellite Satellite 585 chrUn_NT_464974v1 2506 3190 (ACCCATAGAG)n 708 + 2506 3190 0 3 120,308,252, 0,122,432, +,+,+, 614043 Satellite Satellite 585 chrUn_NT_464974v1 4161 4633 (ACCCCATAGGG)n 522 - 4161 4633 0 2 190,282, 0,190, -,-, 614050 Satellite Satellite 585 chrUn_NT_464974v1 4652 5752 (ACCCCATAGGG)n 523 + 4652 5752 0 6 140,159,136,202,102,153, 0,152,349,513,845,947, +,+,+,+,+,+, 614051 Satellite Satellite 585 chrUn_NT_464974v1 6342 6787 (ACCCATAGGG)n 716 + 6342 6787 0 2 209,110, 0,335, +,+, 614055 Satellite Satellite 585 chrUn_NT_464974v1 6825 7628 (ACCCATAGGG)n 722 + 6825 7628 0 2 121,676, 0,127, +,+, 614058 Satellite Satellite 585 chrUn_NT_464974v1 10600 10895 (ACCCCATAGGG)n 628 + 10600 10895 0 2 79,42, 0,253, +,+, 614062 Satellite Satellite 585 chrUn_NT_464974v1 10679 11286 (ACCCATAGGG)n 691 - 10679 11286 0 2 174,433, 0,174, -,-, 614063 Satellite Satellite 585 chrUn_NT_464974v1 11320 11563 (ACCCCATAGGG)n 490 - 11320 11563 0 2 77,49, 0,194, -,-, 614064 Satellite Satellite 585 chrUn_NT_464974v1 14478 14780 (GCCCCACAGCT)n 572 - 14478 14780 0 2 86,94, 0,208, -,-, 614075 Satellite Satellite 585 chrUn_NT_464975v1 2866 3917 GGXHOI 378 - 2866 3917 0 2 516,472, 0,579, -,-, 614081 Satellite W-chromosome 585 chrUn_NT_464975v1 4016 5067 GGXHOI 378 - 4016 5067 0 2 516,472, 0,579, -,-, 614082 Satellite W-chromosome 585 chrUn_NT_464975v1 5166 6217 GGXHOI 378 - 5166 6217 0 2 516,472, 0,579, -,-, 614083 Satellite W-chromosome 585 chrUn_NT_464975v1 6316 7367 GGXHOI 378 - 6316 7367 0 2 516,472, 0,579, -,-, 614084 Satellite W-chromosome 585 chrUn_NT_464975v1 17319 18729 GGXHOI 374 - 17319 18729 0 2 1001,392, 0,1018, -,-, 614095 Satellite W-chromosome 585 chrUn_NT_464976v1 4263 5363 GGERVL-A-int 301 - 4263 5363 0 3 109,242,393, 0,194,707, -,-,-, 614102 LTR ERVL 585 chrUn_NT_464976v1 10398 10863 CR1-X2 343 + 10398 10863 0 2 236,158, 0,307, +,+, 614109 LINE CR1 585 chrUn_NT_464977v1 5767 7534 GGXHOI 445 - 5767 7534 0 2 1358,398, 0,1369, -,-, 614119 Satellite W-chromosome 585 chrUn_NT_464977v1 7635 20740 GGXHOI 419 - 7635 20740 0 10 1312,898,893,3592,1629,316,1788,1461,520,490, 0,1328,2247,3156,6769,8457,8791,10600,12078,12615, -,-,-,-,-,-,-,-,-,-, 614120 Satellite W-chromosome 585 chrUn_NT_464980v1 3614 5250 GGXHOI 371 + 3614 5250 0 2 1098,475, 0,1161, +,+, 614141 Satellite W-chromosome 585 chrUn_NT_464980v1 5479 6740 GGXHOI 344 + 5479 6740 0 3 387,506,286, 0,450,975, +,+,+, 614142 Satellite W-chromosome 585 chrUn_NT_464980v1 6983 8067 GGXHOI 335 + 6983 8067 0 2 287,765, 0,319, +,+, 614143 Satellite W-chromosome 585 chrUn_NT_464980v1 10660 11623 GGXHOI 348 + 10660 11623 0 2 429,516, 0,447, +,+, 614147 Satellite W-chromosome 585 chrUn_NT_464981v1 90 10755 CR1-F 529 + 90 10755 0 32 184,153,199,187,193,204,204,202,155,197,189,200,202,204,203,154,199,190,195,200,203,204,154,202,190,195,200,201,201,151,191,162, 0,226,663,907,1136,1626,1872,2115,2584,3026,3267,3498,3999,4243,4489,4959,5404,5640,5872,6364,6606,6851,7319,7765,8012,8238,8719,8958,9201,9665,10101,10503, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 614163 LINE CR1 585 chrUn_NT_464981v1 11177 12757 CR1-F 504 + 11177 12757 0 6 201,199,203,153,201,189, 0,243,484,951,1149,1391, +,+,+,+,+,+, 614180 LINE CR1 585 chrUn_NT_464981v1 12802 13322 CR1-F 707 + 12802 13322 0 2 168,172, 0,348, +,+, 614182 LINE CR1 585 chrUn_NT_464981v1 13359 14422 CR1-F 481 + 13359 14422 0 5 135,201,200,203,178, 0,158,401,640,885, +,+,+,+,+, 614183 LINE CR1 585 chrUn_NT_464981v1 14466 16336 CR1-F 600 + 14466 16336 0 7 178,191,200,202,202,203,181, 0,223,456,956,1200,1444,1689, +,+,+,+,+,+,+, 614184 LINE CR1 585 chrUn_NT_464981v1 16380 19385 CR1-F 569 + 16380 19385 0 9 176,190,200,203,203,205,155,201,170, 0,221,453,951,1196,1441,1912,2357,2835, +,+,+,+,+,+,+,+,+, 614186 LINE CR1 585 chrUn_NT_464981v1 19868 20883 CR1-F 546 + 19868 20883 0 4 203,204,203,57, 0,245,491,958, +,+,+,+, 614193 LINE CR1 585 chrUn_NT_464982v1 3655 9971 GGERV10_LTR 933 + 3655 9971 0 4 220,4897,484,220, 0,221,5612,6096, +,+,+,+, 614198 LTR ERVL 585 chrUn_NT_464982v1 12917 17608 CR1-H 548 + 12917 17608 0 2 277,4414, 0,277, +,+, 614202 LINE CR1 585 chrUn_NT_464982v1 17744 18473 GGLTR7-int 218 + 17744 18473 0 2 250,476, 0,253, +,+, 614203 LTR ERV1 585 chrUn_NT_464984v1 8000 9422 GGXHOI 365 - 8000 9422 0 3 429,480,440, 0,449,982, -,-,-, 614208 Satellite W-chromosome 585 chrUn_NT_464984v1 9907 11736 GGXHOI 385 - 9907 11736 0 3 529,876,391, 0,542,1438, -,-,-, 614210 Satellite W-chromosome 585 chrUn_NT_464984v1 12683 16875 GGXHOI 358 - 12683 16875 0 2 396,3771, 0,421, -,-, 614212 Satellite W-chromosome 585 chrUn_NT_464984v1 17043 18925 GGXHOI 389 - 17043 18925 0 2 1001,867, 0,1015, -,-, 614213 Satellite W-chromosome 585 chrUn_NT_464984v1 19058 20832 GGXHOI 352 - 19058 20832 0 3 214,954,570, 0,234,1204, -,-,-, 614214 Satellite W-chromosome 585 chrUn_NT_464985v1 6928 7459 Sat-CR1_GG 176 - 6928 7459 0 2 106,164, 0,367, -,-, 614235 Satellite Satellite 585 chrUn_NT_464985v1 8094 8995 Sat-CR1_GG 208 + 8094 8995 0 2 164,476, 0,425, +,+, 614240 Satellite Satellite 585 chrUn_NT_464985v1 11224 11755 Sat-CR1_GG 176 - 11224 11755 0 2 106,164, 0,367, -,-, 614250 Satellite Satellite 585 chrUn_NT_464985v1 12391 12922 Sat-CR1_GG 174 + 12391 12922 0 2 164,106, 0,425, +,+, 614255 Satellite Satellite 585 chrUn_NT_464985v1 15519 16050 Sat-CR1_GG 176 - 15519 16050 0 2 106,164, 0,367, -,-, 614266 Satellite Satellite 585 chrUn_NT_464985v1 16686 17217 Sat-CR1_GG 174 + 16686 17217 0 2 164,106, 0,425, +,+, 614271 Satellite Satellite 585 chrUn_NT_464985v1 19553 20452 Sat-CR1_GG 204 + 19553 20452 0 2 165,473, 0,426, +,+, 614281 Satellite Satellite 585 chrUn_NT_464986v1 1758 2804 GGXHOI 342 - 1758 2804 0 3 293,424,262, 0,315,784, -,-,-, 614287 Satellite W-chromosome 585 chrUn_NT_464986v1 2950 3752 GGXHOI 443 - 2950 3752 0 3 143,392,232, 0,160,570, -,-,-, 614288 Satellite W-chromosome 585 chrUn_NT_464986v1 3852 6994 GGXHOI 411 - 3852 6994 0 7 359,357,695,359,681,359,233, 0,374,746,1456,1835,2531,2909, -,-,-,-,-,-,-, 614289 Satellite W-chromosome 585 chrUn_NT_464986v1 7101 8082 GGXHOI 425 - 7101 8082 0 3 356,360,235, 0,371,746, -,-,-, 614290 Satellite W-chromosome 585 chrUn_NT_464986v1 8267 9166 GGXHOI 437 - 8267 9166 0 3 278,353,235, 0,293,664, -,-,-, 614291 Satellite W-chromosome 585 chrUn_NT_464986v1 9266 11366 GGXHOI 400 - 9266 11366 0 5 357,356,683,358,280, 0,372,748,1446,1820, -,-,-,-,-, 614292 Satellite W-chromosome 585 chrUn_NT_464986v1 12045 15612 GGXHOI 375 - 12045 15612 0 8 307,142,393,655,355,482,149,923, 0,324,485,899,1573,1943,2480,2644, -,-,-,-,-,-,-,-, 614294 Satellite W-chromosome 585 chrUn_NT_464986v1 16299 17224 GGXHOI 387 - 16299 17224 0 2 753,160, 0,765, -,-, 614296 Satellite W-chromosome 585 chrUn_NT_464986v1 17583 18332 GGXHOI 355 - 17583 18332 0 2 583,150, 0,599, -,-, 614297 Satellite W-chromosome 585 chrUn_NT_464986v1 18759 20830 GGXHOI 376 - 18759 20830 0 4 466,606,356,593, 0,481,1102,1478, -,-,-,-, 614298 Satellite W-chromosome 585 chrUn_NT_464987v1 7563 20257 GGXHOI 423 + 7563 20257 0 7 230,3452,2598,2363,3008,575,367, 0,248,3716,6330,8711,11730,12327, +,+,+,+,+,+,+, 614304 Satellite W-chromosome 585 chrUn_NT_464988v1 8500 8725 (GCCCCACAGCT)n 410 - 8500 8725 0 2 85,98, 0,127, -,-, 614312 Satellite Satellite 585 chrUn_NT_464988v1 12484 12528 (GCCCCG)n 658 + 12484 12528 0 2 7,7, 0,37, +,+, 614315 Simple_repeat Simple_repeat 585 chrUn_NT_464989v1 4739 5366 CR1-H 692 + 4739 5366 0 2 469,139, 0,488, +,+, 614328 LINE CR1 585 chrUn_NT_464989v1 17289 17713 CR1-X1 486 - 17289 17713 0 2 83,341, 0,83, -,-, 614341 LINE CR1 585 chrUn_NT_464990v1 976 1850 GGXHOI 352 - 976 1850 0 2 507,309, 0,565, -,-, 614345 Satellite W-chromosome 585 chrUn_NT_464990v1 6590 8134 GGXHOI 379 - 6590 8134 0 2 1009,472, 0,1072, -,-, 614351 Satellite W-chromosome 585 chrUn_NT_464990v1 8233 9284 GGXHOI 378 - 8233 9284 0 2 516,472, 0,579, -,-, 614352 Satellite W-chromosome 585 chrUn_NT_464990v1 16283 17334 GGXHOI 378 - 16283 17334 0 2 516,472, 0,579, -,-, 614360 Satellite W-chromosome 585 chrUn_NT_464990v1 17433 18484 GGXHOI 378 - 17433 18484 0 2 516,472, 0,579, -,-, 614361 Satellite W-chromosome 585 chrUn_NT_464992v1 1928 3667 GGERVL-A-int 744 - 1928 3667 0 2 1283,456, 0,1283, -,-, 614375 LTR ERVL 585 chrUn_NT_464993v1 2096 6212 GGXHOI 352 - 2096 6212 0 4 508,1855,1046,567, 0,567,2485,3549, -,-,-,-, 614391 Satellite W-chromosome 585 chrUn_NT_464993v1 7262 8313 GGXHOI 378 - 7262 8313 0 2 516,472, 0,579, -,-, 614394 Satellite W-chromosome 585 chrUn_NT_464993v1 8412 9054 GGXHOI 376 - 8412 9054 0 2 475,149, 0,493, -,-, 614395 Satellite W-chromosome 585 chrUn_NT_464993v1 10927 11977 GGXHOI 377 - 10927 11977 0 2 515,472, 0,578, -,-, 614399 Satellite W-chromosome 585 chrUn_NT_464993v1 13224 14275 GGXHOI 378 - 13224 14275 0 2 516,472, 0,579, -,-, 614402 Satellite W-chromosome 585 chrUn_NT_464993v1 20325 20787 (CCTTG)n 550 + 20325 20787 0 2 209,211, 0,251, +,+, 614414 Simple_repeat Simple_repeat 585 chrUn_NT_464994v1 728 1974 GGXHOI 372 + 728 1974 0 4 236,190,42,719, 0,247,463,527, +,+,+,+, 614417 Satellite W-chromosome 585 chrUn_NT_464994v1 2550 3805 GGXHOI 401 + 2550 3805 0 2 503,729, 0,526, +,+, 614421 Satellite W-chromosome 585 chrUn_NT_464994v1 4382 5638 GGXHOI 401 + 4382 5638 0 2 504,729, 0,527, +,+, 614424 Satellite W-chromosome 585 chrUn_NT_464994v1 6212 7464 GGXHOI 390 + 6212 7464 0 2 502,727, 0,525, +,+, 614427 Satellite W-chromosome 585 chrUn_NT_464994v1 8040 9290 GGXHOI 390 + 8040 9290 0 2 502,725, 0,525, +,+, 614430 Satellite W-chromosome 585 chrUn_NT_464994v1 10218 12418 GGXHOI 376 - 10218 12418 0 3 193,1713,239, 0,226,1961, -,-,-, 614432 Satellite W-chromosome 585 chrUn_NT_464994v1 12451 16929 GGXHOI 375 - 12451 16929 0 5 329,1118,1619,695,608, 0,342,1476,3146,3870, -,-,-,-,-, 614435 Satellite W-chromosome 585 chrUn_NT_464996v1 4579 5155 GGXHOI 385 - 4579 5155 0 2 286,258, 0,318, -,-, 614450 Satellite W-chromosome 585 chrUn_NT_464996v1 5501 6095 GGXHOI 407 - 5501 6095 0 2 244,335, 0,259, -,-, 614452 Satellite W-chromosome 585 chrUn_NT_464996v1 6627 11344 GGXHOI 402 - 6627 11344 0 5 1521,645,978,1143,334, 0,1567,2227,3225,4383, -,-,-,-,-, 614454 Satellite W-chromosome 585 chrUn_NT_464996v1 11428 12202 GGXHOI 394 - 11428 12202 0 2 351,411, 0,363, -,-, 614455 Satellite W-chromosome 585 chrUn_NT_464996v1 12285 13279 GGXHOI 393 - 12285 13279 0 2 562,413, 0,581, -,-, 614456 Satellite W-chromosome 585 chrUn_NT_464996v1 13364 16959 GGXHOI 421 - 13364 16959 0 4 2014,146,983,413, 0,2026,2183,3182, -,-,-,-, 614457 Satellite W-chromosome 585 chrUn_NT_464996v1 17043 20690 GGXHOI 413 - 17043 20690 0 5 1526,562,148,892,377, 0,1577,2158,2321,3270, -,-,-,-,-, 614458 Satellite W-chromosome 585 chrUn_NT_464997v1 4268 6546 GGXHOI 392 - 4268 6546 0 2 1622,640, 0,1638, -,-, 614462 Satellite W-chromosome 585 chrUn_NT_464997v1 9047 9907 GGXHOI 330 - 9047 9907 0 2 574,244, 0,616, -,-, 614468 Satellite W-chromosome 585 chrUn_NT_464997v1 12205 13286 GGXHOI 367 - 12205 13286 0 4 399,150,276,191, 0,416,588,890, -,-,-,-, 614473 Satellite W-chromosome 585 chrUn_NT_464997v1 15122 17553 GGXHOI 413 - 15122 17553 0 2 1106,1311, 0,1120, -,-, 614477 Satellite W-chromosome 585 chrUn_NT_464997v1 17640 18882 GGXHOI 388 - 17640 18882 0 2 564,663, 0,579, -,-, 614478 Satellite W-chromosome 585 chrUn_NT_464998v1 2070 7022 CR1-D2 573 - 2070 7022 0 2 572,801, 0,4151, -,-, 614485 LINE CR1 585 chrUn_NT_464999v1 4688 7240 GGXHOI 350 - 4688 7240 0 5 560,545,397,575,396, 0,574,1133,1549,2156, -,-,-,-,-, 614498 Satellite W-chromosome 585 chrUn_NT_464999v1 7318 8479 GGXHOI 345 - 7318 8479 0 2 140,965, 0,196, -,-, 614499 Satellite W-chromosome 585 chrUn_NT_464999v1 8702 10706 GGXHOI 329 - 8702 10706 0 3 783,475,709, 0,803,1295, -,-,-, 614500 Satellite W-chromosome 585 chrUn_NT_464999v1 10969 17221 GGXHOI 373 - 10969 17221 0 7 469,1017,811,767,1163,765,1092, 0,489,1549,2380,3169,4347,5160, -,-,-,-,-,-,-, 614501 Satellite W-chromosome 585 chrUn_NT_464999v1 17286 20760 GGXHOI 353 - 17286 20760 0 3 377,1006,2049, 0,397,1425, -,-,-, 614502 Satellite W-chromosome 585 chrUn_NT_465000v1 9916 10061 GA-rich 300 + 9916 10061 0 2 43,45, 0,100, +,+, 614517 Low_complexity Low_complexity 585 chrUn_NT_465000v1 12858 12998 GA-rich 268 + 12858 12998 0 2 43,41, 0,99, +,+, 614522 Low_complexity Low_complexity 585 chrUn_NT_465000v1 15857 16001 GA-rich 298 + 15857 16001 0 2 43,67, 0,77, +,+, 614528 Low_complexity Low_complexity 585 chrUn_NT_465001v1 798 3567 GGXHOI 387 + 798 3567 0 3 1045,1084,514, 0,1108,2255, +,+,+, 614536 Satellite W-chromosome 585 chrUn_NT_465001v1 6494 8128 GGXHOI 352 + 6494 8128 0 2 828,744, 0,890, +,+, 614541 Satellite W-chromosome 585 chrUn_NT_465001v1 8922 9807 GGXHOI 386 + 8922 9807 0 2 307,515, 0,370, +,+, 614543 Satellite W-chromosome 585 chrUn_NT_465001v1 9906 10957 GGXHOI 392 + 9906 10957 0 2 472,516, 0,535, +,+, 614544 Satellite W-chromosome 585 chrUn_NT_465001v1 16303 18392 GGXHOI 376 + 16303 18392 0 4 615,212,608,509, 0,678,913,1580, +,+,+,+, 614552 Satellite W-chromosome 585 chrUn_NT_465001v1 18482 19595 GGXHOI 401 + 18482 19595 0 3 264,576,186, 0,327,927, +,+,+, 614553 Satellite W-chromosome 585 chrUn_NT_465002v1 4240 8732 GGLTR7A 478 + 4240 8732 0 4 125,298,563,611, 0,126,3317,3881, +,+,+,+, 614557 LTR ERV1 585 chrUn_NT_465002v1 5646 7140 CR1-H 836 - 5646 7140 0 2 795,699, 0,795, -,-, 614559 LINE CR1 585 chrUn_NT_465002v1 8733 10124 GGLTR7-int 298 + 8733 10124 0 2 442,851, 0,540, +,+, 614560 LTR ERV1 585 chrUn_NT_465002v1 11172 12088 CR1-H 676 - 11172 12088 0 2 278,43, 0,873, -,-, 614564 LINE CR1 585 chrUn_NT_465002v1 12088 12869 GGLTR12C 512 - 12088 12869 0 3 48,180,106, 0,79,675, -,-,-, 614566 LTR ERVL 585 chrUn_NT_465002v1 13331 17597 GGERVL-C-int 713 - 13331 17597 0 4 505,548,215,473, 0,506,1579,3793, -,-,-,-, 614569 LTR ERVL 585 chrUn_NT_465002v1 15125 17127 GGLTR3F1 798 + 15125 17127 0 3 230,81,1508, 0,410,494, +,+,+, 614571 LTR ERVL 585 chrUn_NT_465002v1 17817 18900 GGLTR7-int 437 + 17817 18900 0 3 158,310,88, 0,158,995, +,+,+, 614574 LTR ERV1 585 chrUn_NT_465002v1 18899 20442 GGERVL-B-int 763 - 18899 20442 0 2 984,557, 0,986, -,-, 614575 LTR ERVL 585 chrUn_NT_465004v1 3523 4140 GGXHOI 414 - 3523 4140 0 2 144,452, 0,165, -,-, 614594 Satellite W-chromosome 585 chrUn_NT_465005v1 1660 2925 GGLTR7-int 294 + 1660 2925 0 2 941,277, 0,988, +,+, 614607 LTR ERV1 585 chrUn_NT_465005v1 18321 20549 GGLTR7-int 513 + 18321 20549 0 2 106,1640, 0,588, +,+, 614623 LTR ERV1 585 chrUn_NT_465007v1 14629 15734 GGERVL-A-int 303 - 14629 15734 0 3 109,242,393, 0,199,712, -,-,-, 614639 LTR ERVL 585 chrUn_NT_465009v1 959 2299 GGXHOI 574 - 959 2299 0 2 463,858, 0,482, -,-, 614648 Satellite W-chromosome 585 chrUn_NT_465009v1 3203 6692 GGXHOI 473 - 3203 6692 0 3 486,704,2067, 0,674,1422, -,-,-, 614651 Satellite W-chromosome 585 chrUn_NT_465009v1 7817 11041 GGXHOI 556 - 7817 11041 0 2 2167,872, 0,2352, -,-, 614655 Satellite W-chromosome 585 chrUn_NT_465009v1 15136 17819 GGXHOI 540 - 15136 17819 0 2 919,1751, 0,932, -,-, 614660 Satellite W-chromosome 585 chrUn_NT_465009v1 18469 20666 GGXHOI 532 - 18469 20666 0 2 285,1861, 0,336, -,-, 614662 Satellite W-chromosome 585 chrUn_NT_465010v1 2957 17053 GGXHOI 370 - 2957 17053 0 8 679,1979,907,7212,1752,784,364,163, 0,704,2699,3668,10942,12756,13555,13933, -,-,-,-,-,-,-,-, 614666 Satellite W-chromosome 585 chrUn_NT_465010v1 19508 20679 GGXHOI 396 - 19508 20679 0 2 457,700, 0,471, -,-, 614672 Satellite W-chromosome 585 chrUn_NT_465011v1 1663 3135 GGLTR7B 585 - 1663 3135 0 2 112,883, 0,589, -,-, 614674 LTR ERV1 585 chrUn_NT_465012v1 3381 6507 GGLTR7-int 412 - 3381 6507 0 4 277,949,1642,116, 0,324,1368,3010, -,-,-,-, 614713 LTR ERV1 585 chrUn_NT_465012v1 7978 8068 G-rich 638 + 7978 8068 0 2 35,30, 0,60, +,+, 614716 Low_complexity Low_complexity 585 chrUn_NT_465012v1 14728 17836 GGLTR7-int 402 - 14728 17836 0 4 279,950,1622,115, 0,326,1371,2993, -,-,-,-, 614722 LTR ERV1 585 chrUn_NT_465012v1 20137 20230 CR1-E 653 + 20137 20230 0 2 49,44, 0,49, +,+, 614725 LINE CR1 585 chrUn_NT_465013v1 11975 13710 GGERVL-A-int 731 - 11975 13710 0 2 1276,459, 0,1276, -,-, 614736 LTR ERVL 585 chrUn_NT_465014v1 11452 11737 CR1-X2 424 - 11452 11737 0 2 222,63, 0,222, -,-, 614750 LINE CR1 585 chrUn_NT_465015v1 671 1785 GGXHOI 318 - 671 1785 0 2 511,540, 0,574, -,-, 614754 Satellite W-chromosome 585 chrUn_NT_465015v1 3219 5291 GGXHOI 352 - 3219 5291 0 2 947,1067, 0,1005, -,-, 614757 Satellite W-chromosome 585 chrUn_NT_465016v1 4173 4676 GGLTR3F2 688 + 4173 4676 0 3 230,118,77, 0,283,426, +,+,+, 614775 LTR ERVL 585 chrUn_NT_465017v1 1367 6978 GGXHOI 396 - 1367 6978 0 6 377,454,1399,1887,457,942, 0,393,867,2283,4187,4669, -,-,-,-,-,-, 614785 Satellite W-chromosome 585 chrUn_NT_465017v1 7061 9794 GGXHOI 386 - 7061 9794 0 4 396,432,413,1386, 0,413,889,1347, -,-,-,-, 614786 Satellite W-chromosome 585 chrUn_NT_465017v1 9921 14333 GGXHOI 395 - 9921 14333 0 7 1394,537,442,544,443,542,402, 0,1412,1969,2425,2989,3451,4010, -,-,-,-,-,-,-, 614787 Satellite W-chromosome 585 chrUn_NT_465017v1 15446 17802 GGXHOI 415 - 15446 17802 0 2 977,1361, 0,995, -,-, 614790 Satellite W-chromosome 585 chrUn_NT_465017v1 17872 18813 GGXHOI 387 - 17872 18813 0 2 472,452, 0,489, -,-, 614791 Satellite W-chromosome 585 chrUn_NT_465017v1 19844 20646 GGXHOI 383 - 19844 20646 0 2 445,311, 0,491, -,-, 614793 Satellite W-chromosome 585 chrUn_NT_465019v1 14327 19182 CR1-D2 529 + 14327 19182 0 2 768,566, 0,4289, +,+, 614805 LINE CR1 585 chrUn_NT_465021v1 11140 13297 CR1-C 865 - 11140 13297 0 2 612,1545, 0,612, -,-, 614843 LINE CR1 585 chrUn_NT_465021v1 15476 16924 GGLTR7B 562 - 15476 16924 0 2 114,856, 0,592, -,-, 614846 LTR ERV1 585 chrUn_NT_465022v1 1304 2496 GGXHOI 403 - 1304 2496 0 2 726,445, 0,747, -,-, 614853 Satellite W-chromosome 585 chrUn_NT_465022v1 5172 8185 GGXHOI 399 - 5172 8185 0 3 545,176,2232, 0,561,781, -,-,-, 614858 Satellite W-chromosome 585 chrUn_NT_465022v1 12823 14023 GGXHOI 389 - 12823 14023 0 2 728,450, 0,750, -,-, 614866 Satellite W-chromosome 585 chrUn_NT_465022v1 14056 15945 GGXHOI 399 - 14056 15945 0 2 1426,440, 0,1449, -,-, 614868 Satellite W-chromosome 585 chrUn_NT_465022v1 15978 18528 GGXHOI 409 - 15978 18528 0 2 1232,1293, 0,1257, -,-, 614870 Satellite W-chromosome 585 chrUn_NT_465022v1 18616 19818 GGXHOI 391 - 18616 19818 0 3 567,145,453, 0,587,749, -,-,-, 614871 Satellite W-chromosome 585 chrUn_NT_465024v1 13289 14419 CR1-B2 702 + 13289 14419 0 2 224,903, 0,227, +,+, 614887 LINE CR1 585 chrUn_NT_465025v1 1827 3078 Char12Mar1_GG 600 - 1827 3078 0 2 120,581, 0,670, -,-, 614896 DNA hAT-Charlie 585 chrUn_NT_465025v1 5533 6157 CR1-H 378 - 5533 6157 0 2 379,209, 0,415, -,-, 614899 LINE CR1 585 chrUn_NT_465025v1 6175 7320 CR1-C2 686 + 6175 7320 0 2 133,86, 0,1059, +,+, 614900 LINE CR1 585 chrUn_NT_465025v1 10256 11510 Char12Mar1_GG 592 - 10256 11510 0 2 121,581, 0,673, -,-, 614904 DNA hAT-Charlie 585 chrUn_NT_465025v1 13962 14583 CR1-H 380 - 13962 14583 0 2 376,209, 0,412, -,-, 614907 LINE CR1 585 chrUn_NT_465025v1 14601 15744 CR1-C2 673 + 14601 15744 0 2 133,85, 0,1058, +,+, 614908 LINE CR1 585 chrUn_NT_465025v1 18613 19867 Char12Mar1_GG 525 - 18613 19867 0 2 127,577, 0,677, -,-, 614912 DNA hAT-Charlie 585 chrUn_NT_465026v1 8679 10085 GGLTR7-int 289 - 8679 10085 0 3 284,313,101, 0,990,1305, -,-,-, 614921 LTR ERV1 585 chrUn_NT_465026v1 10820 13531 GGERVL-B-int 656 - 10820 13531 0 2 922,1789, 0,922, -,-, 614923 LTR ERVL 585 chrUn_NT_465026v1 15201 15879 GGLTR7A 739 - 15201 15879 0 2 581,88, 0,590, -,-, 614925 LTR ERV1 585 chrUn_NT_465026v1 15877 19127 GGLTR7A 815 + 15877 19127 0 2 2661,581, 0,2669, +,+, 614926 LTR ERV1 585 chrUn_NT_465027v1 4137 4744 CR1-H 662 + 4137 4744 0 2 468,139, 0,468, +,+, 614931 LINE CR1 585 chrUn_NT_465027v1 14810 15267 CR1-H 677 + 14810 15267 0 2 296,161, 0,296, +,+, 614941 LINE CR1 585 chrUn_NT_465027v1 18483 19101 CR1-H 675 + 18483 19101 0 2 472,140, 0,478, +,+, 614946 LINE CR1 585 chrUn_NT_465028v1 614 2408 (CCTCG)n 512 + 614 2408 0 5 173,404,625,324,184, 0,194,617,1267,1610, +,+,+,+,+, 614952 Simple_repeat Simple_repeat 585 chrUn_NT_465028v1 2453 4859 GGERV10_LTR 818 + 2453 4859 0 2 39,36, 0,2370, +,+, 614954 LTR ERVL 585 chrUn_NT_465028v1 2493 4698 GGLTR10D-int 894 + 2493 4698 0 2 1840,362, 0,1843, +,+, 614955 LTR ERVK 585 chrUn_NT_465028v1 4871 7324 GGLTR7-int 597 - 4871 7324 0 2 790,339, 0,2114, -,-, 614956 LTR ERV1 585 chrUn_NT_465029v1 9969 10066 (TCCCACC)n 286 + 9969 10066 0 2 42,16, 0,81, +,+, 614979 Simple_repeat Simple_repeat 585 chrUn_NT_465031v1 2485 3531 GGXHOI 369 - 2485 3531 0 2 511,472, 0,574, -,-, 615023 Satellite W-chromosome 585 chrUn_NT_465031v1 3630 6345 GGXHOI 379 - 3630 6345 0 3 513,1039,1040, 0,575,1675, -,-,-, 615024 Satellite W-chromosome 585 chrUn_NT_465031v1 8154 9777 GGXHOI 387 - 8154 9777 0 2 516,1045, 0,578, -,-, 615027 Satellite W-chromosome 585 chrUn_NT_465031v1 15601 17124 GGXHOI 378 - 15601 17124 0 2 1077,385, 0,1138, -,-, 615037 Satellite W-chromosome 585 chrUn_NT_465031v1 17313 19280 GGXHOI 380 - 17313 19280 0 3 468,996,384, 0,525,1583, -,-,-, 615038 Satellite W-chromosome 585 chrUn_NT_465034v1 1329 3287 Sat-CR1_GG 228 + 1329 3287 0 2 139,333, 0,1625, +,+, 615068 Satellite Satellite 585 chrUn_NT_465035v1 5071 9851 GGXHOI 498 + 5071 9851 0 6 565,184,368,305,230,1927, 0,847,1354,1958,2561,2853, +,+,+,+,+,+, 615108 Satellite W-chromosome 585 chrUn_NT_465035v1 9931 11012 GGXHOI 502 + 9931 11012 0 2 106,487, 0,594, +,+, 615113 Satellite W-chromosome 585 chrUn_NT_465035v1 14260 19065 GGXHOI 550 + 14260 19065 0 8 617,194,247,196,296,195,255,217, 0,1014,1531,2225,2744,3438,3955,4588, +,+,+,+,+,+,+,+, 615121 Satellite W-chromosome 585 chrUn_NT_465035v1 19706 20318 GGXHOI 532 + 19706 20318 0 2 314,63, 0,549, +,+, 615131 Satellite W-chromosome 585 chrUn_NT_465037v1 2805 3927 (CAAGG)n 505 + 2805 3927 0 5 157,50,197,240,257, 0,347,397,594,865, +,+,+,+,+, 615150 Simple_repeat Simple_repeat 585 chrUn_NT_465037v1 4255 4540 (CAGGC)n 623 + 4255 4540 0 2 63,214, 0,71, +,+, 615154 Simple_repeat Simple_repeat 585 chrUn_NT_465037v1 4808 5344 (CAAGG)n 502 + 4808 5344 0 2 299,218, 0,318, +,+, 615157 Simple_repeat Simple_repeat 585 chrUn_NT_465038v1 17813 18559 CR1-F 284 - 17813 18559 0 2 551,195, 0,551, -,-, 615170 LINE CR1 585 chrUn_NT_465040v1 5830 9475 GGXHOI 578 - 5830 9475 0 4 149,247,567,583, 0,818,1823,3062, -,-,-,-, 615179 Satellite W-chromosome 585 chrUn_NT_465040v1 9814 10490 GGXHOI 562 - 9814 10490 0 2 240,396, 0,280, -,-, 615184 Satellite W-chromosome 585 chrUn_NT_465040v1 11756 13805 GGXHOI 598 - 11756 13805 0 3 197,36,847, 0,833,1202, -,-,-, 615188 Satellite W-chromosome 585 chrUn_NT_465040v1 13844 18122 GGXHOI 564 - 13844 18122 0 8 407,143,287,25,244,55,335,178, 0,418,1232,1530,2057,2956,3033,4100, -,-,-,-,-,-,-,-, 615192 Satellite W-chromosome 585 chrUn_NT_465040v1 18848 20473 GGXHOI 596 - 18848 20473 0 2 407,661, 0,964, -,-, 615198 Satellite W-chromosome 585 chrUn_NT_465041v1 4148 4709 GGXHOI 344 - 4148 4709 0 2 272,269, 0,292, -,-, 615204 Satellite W-chromosome 585 chrUn_NT_465041v1 6210 9265 GGXHOI 371 - 6210 9265 0 4 347,1002,1085,532, 0,363,1381,2523, -,-,-,-, 615207 Satellite W-chromosome 585 chrUn_NT_465041v1 9431 10572 GGXHOI 369 - 9431 10572 0 2 595,525, 0,616, -,-, 615208 Satellite W-chromosome 585 chrUn_NT_465042v1 17262 19664 GGLTR7-int 611 + 17262 19664 0 3 337,859,750, 0,785,1652, +,+,+, 615241 LTR ERV1 585 chrUn_NT_465042v1 19821 20471 GGLTR10D-int 838 - 19821 20471 0 2 321,326, 0,324, -,-, 615243 LTR ERVK 585 chrUn_NT_465043v1 4966 19764 GGXHOI 474 - 4966 19764 0 17 491,1837,356,232,886,4084,266,736,186,266,609,223,561,1966,1083,432,232, 0,514,2367,2740,2993,3895,8001,8283,9041,9249,9531,10156,10395,10979,12967,14073,14566, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 615245 Satellite W-chromosome 585 chrUn_NT_465044v1 12229 14003 GGERV28_I-int 164 - 12229 14003 0 4 143,384,173,500, 0,420,831,1274, -,-,-,-, 615252 LTR ERVK 585 chrUn_NT_465044v1 16317 18189 GGXHOI 413 + 16317 18189 0 2 411,1439, 0,433, +,+, 615255 Satellite W-chromosome 585 chrUn_NT_465045v1 5496 7478 GGXHOI 415 - 5496 7478 0 2 1478,486, 0,1496, -,-, 615265 Satellite W-chromosome 585 chrUn_NT_465045v1 9482 10421 GGXHOI 443 - 9482 10421 0 2 480,402, 0,537, -,-, 615268 Satellite W-chromosome 585 chrUn_NT_465045v1 10488 11483 GGXHOI 383 - 10488 11483 0 2 274,702, 0,293, -,-, 615269 Satellite W-chromosome 585 chrUn_NT_465045v1 14017 14732 GGXHOI 378 - 14017 14732 0 3 267,210,169, 0,285,546, -,-,-, 615273 Satellite W-chromosome 585 chrUn_NT_465045v1 16130 16718 GGXHOI 386 - 16130 16718 0 2 425,124, 0,464, -,-, 615276 Satellite W-chromosome 585 chrUn_NT_465045v1 17680 18688 GGXHOI 328 - 17680 18688 0 2 737,223, 0,785, -,-, 615278 Satellite W-chromosome 585 chrUn_NT_465046v1 830 2732 GGXHOI 421 + 830 2732 0 2 1404,481, 0,1421, +,+, 615286 Satellite W-chromosome 585 chrUn_NT_465046v1 3267 6835 GGXHOI 405 + 3267 6835 0 3 1532,1685,277, 0,1589,3291, +,+,+, 615289 Satellite W-chromosome 585 chrUn_NT_465046v1 7068 8916 GGXHOI 420 + 7068 8916 0 4 142,420,732,481, 0,183,618,1367, +,+,+,+, 615290 Satellite W-chromosome 585 chrUn_NT_465046v1 9453 11440 GGXHOI 421 + 9453 11440 0 2 1489,481, 0,1506, +,+, 615293 Satellite W-chromosome 585 chrUn_NT_465046v1 11977 13964 GGXHOI 421 + 11977 13964 0 2 1489,481, 0,1506, +,+, 615296 Satellite W-chromosome 585 chrUn_NT_465046v1 14629 16487 GGXHOI 419 + 14629 16487 0 3 612,733,481, 0,627,1377, +,+,+, 615299 Satellite W-chromosome 585 chrUn_NT_465046v1 17153 19011 GGXHOI 419 + 17153 19011 0 3 612,733,481, 0,627,1377, +,+,+, 615302 Satellite W-chromosome 585 chrUn_NT_465047v1 9377 10702 CR1-D2 704 + 9377 10702 0 2 529,441, 0,884, +,+, 615324 LINE CR1 585 chrUn_NT_465047v1 15133 15986 CR1-D2 688 - 15133 15986 0 2 34,773, 0,80, -,-, 615328 LINE CR1 585 chrUn_NT_465047v1 15990 16339 GGERVL-A-int 494 - 15990 16339 0 2 97,146, 0,203, -,-, 615329 LTR ERVL 585 chrUn_NT_465047v1 16087 16962 GGERVL-B-int 309 - 16087 16962 0 2 12,267, 0,608, -,-, 615330 LTR ERVL 585 chrUn_NT_465048v1 6293 7832 GGXHOI 387 + 6293 7832 0 2 472,1004, 0,535, +,+, 615345 Satellite W-chromosome 585 chrUn_NT_465048v1 8551 10095 GGXHOI 385 + 8551 10095 0 2 472,1009, 0,535, +,+, 615347 Satellite W-chromosome 585 chrUn_NT_465048v1 11995 13610 GGXHOI 383 + 11995 13610 0 2 470,1082, 0,533, +,+, 615350 Satellite W-chromosome 585 chrUn_NT_465048v1 17077 18742 GGXHOI 386 + 17077 18742 0 2 1086,516, 0,1149, +,+, 615354 Satellite W-chromosome 585 chrUn_NT_465049v1 7602 8016 CR1-Y 735 + 7602 8016 0 2 34,380, 0,34, +,+, 615361 LINE CR1 585 chrUn_NT_465049v1 16701 18749 GGLTR7-int 666 - 16701 18749 0 3 31,75,1313, 0,32,735, -,-,-, 615369 LTR ERV1 585 chrUn_NT_465050v1 10524 15187 GGXHOI 572 - 10524 15187 0 2 433,843, 0,3820, -,-, 615376 Satellite W-chromosome 585 chrUn_NT_465050v1 15220 18728 GGXHOI 550 - 15220 18728 0 4 112,553,615,25, 0,1701,2506,3483, -,-,-,-, 615379 Satellite W-chromosome 585 chrUn_NT_465050v1 18813 19708 GGXHOI 574 - 18813 19708 0 2 25,559, 0,336, -,-, 615383 Satellite W-chromosome 585 chrUn_NT_465050v1 19737 20442 GGXHOI 577 - 19737 20442 0 3 148,241,27, 0,165,678, -,-,-, 615386 Satellite W-chromosome 585 chrUn_NT_465051v1 4930 5651 CR1-F 292 - 4930 5651 0 2 534,176, 0,545, -,-, 615391 LINE CR1 585 chrUn_NT_465051v1 14994 15495 GGLTR3F2 664 + 14994 15495 0 3 228,118,76, 0,281,425, +,+,+, 615400 LTR ERVL 585 chrUn_NT_465052v1 2455 2751 GGLTR3E1 681 + 2455 2751 0 2 178,118, 0,178, +,+, 615409 LTR ERVL 585 chrUn_NT_465052v1 4794 5955 CR1-F 805 - 4794 5955 0 2 292,343, 0,818, -,-, 615413 LINE CR1 585 chrUn_NT_465052v1 11652 12428 CR1-F 266 + 11652 12428 0 2 203,573, 0,203, +,+, 615420 LINE CR1 585 chrUn_NT_465053v1 834 1064 (CTCTATGGGG)n 506 + 834 1064 0 2 76,31, 0,199, +,+, 615431 Satellite Satellite 585 chrUn_NT_465054v1 1046 1615 (CACTC)n 410 + 1046 1615 0 2 180,366, 0,203, +,+, 615455 Simple_repeat Simple_repeat 585 chrUn_NT_465054v1 2364 2442 GGLTR3F1 956 + 2364 2442 0 2 45,33, 0,45, +,+, 615458 LTR ERVL 585 chrUn_NT_465054v1 2460 2867 (CACTC)n 424 + 2460 2867 0 2 127,100, 0,307, +,+, 615459 Simple_repeat Simple_repeat 585 chrUn_NT_465054v1 2986 3368 (CACTC)n 415 + 2986 3368 0 2 183,182, 0,200, +,+, 615462 Simple_repeat Simple_repeat 585 chrUn_NT_465054v1 4422 7058 GGERVL-A-int 799 - 4422 7058 0 4 744,47,1261,527, 0,795,847,2109, -,-,-,-, 615466 LTR ERVL 585 chrUn_NT_465054v1 7058 9146 GGERVL-B-int 710 - 7058 9146 0 2 1600,486, 0,1602, -,-, 615468 LTR ERVL 585 chrUn_NT_465054v1 11383 17319 CR1-C 839 - 11383 17319 0 2 1311,1834, 0,4102, -,-, 615470 LINE CR1 585 chrUn_NT_465054v1 12694 15024 GGERVL-A-int 865 - 12694 15024 0 2 490,1837, 0,493, -,-, 615471 LTR ERVL 585 chrUn_NT_465054v1 17317 20432 GGLTR7-int 586 + 17317 20432 0 3 437,506,1047, 0,437,2068, +,+,+, 615473 LTR ERV1 585 chrUn_NT_465055v1 13961 16153 CR1-C 803 - 13961 16153 0 2 626,1566, 0,626, -,-, 615488 LINE CR1 585 chrUn_NT_465055v1 18359 19856 GGLTR7B 592 - 18359 19856 0 2 113,891, 0,606, -,-, 615493 LTR ERV1 585 chrUn_NT_465057v1 1668 2159 GGLTR3F2 600 + 1668 2159 0 2 223,219, 0,272, +,+, 615534 LTR ERVL 585 chrUn_NT_465058v1 14518 20393 GGXHOI 550 + 14518 20393 0 8 1118,170,451,415,147,260,197,370, 0,1639,2483,3148,4121,4317,5249,5505, +,+,+,+,+,+,+,+, 615565 Satellite W-chromosome 585 chrUn_NT_465059v1 3060 12512 GGXHOI 415 - 3060 12512 0 4 567,150,2511,6110, 0,624,804,3342, -,-,-,-, 615573 Satellite W-chromosome 585 chrUn_NT_465059v1 13445 14177 GGXHOI 436 - 13445 14177 0 2 311,399, 0,333, -,-, 615575 Satellite W-chromosome 585 chrUn_NT_465059v1 17205 20395 GGXHOI 421 - 17205 20395 0 3 1151,152,1815, 0,1166,1375, -,-,-, 615578 Satellite W-chromosome 585 chrUn_NT_465061v1 1128 1511 CR1-H 477 - 1128 1511 0 2 145,238, 0,145, -,-, 615606 LINE CR1 585 chrUn_NT_465062v1 2877 5392 GGERVL-B-int 496 + 2877 5392 0 2 926,1005, 0,1510, +,+, 615631 LTR ERVL 585 chrUn_NT_465062v1 6618 14053 GGLTR7-int 864 + 6618 14053 0 6 612,1108,1633,3099,549,96, 0,612,1720,3691,6790,7339, +,+,+,+,+,+, 615636 LTR ERV1 585 chrUn_NT_465062v1 15174 16019 GGLTR7-int 789 - 15174 16019 0 3 350,260,213, 0,350,632, -,-,-, 615639 LTR ERV1 585 chrUn_NT_465062v1 16257 20001 GGERV28_I-int 148 - 16257 20001 0 3 1992,376,781, 0,2306,2963, -,-,-, 615640 LTR ERVK 585 chrUn_NT_465063v1 684 2749 GGXHOI 393 + 684 2749 0 3 803,641,583, 0,819,1482, +,+,+, 615642 Satellite W-chromosome 585 chrUn_NT_465063v1 3586 6679 GGXHOI 391 + 3586 6679 0 4 270,1543,641,583, 0,288,1847,2510, +,+,+,+, 615644 Satellite W-chromosome 585 chrUn_NT_465063v1 7516 11520 GGXHOI 383 + 7516 11520 0 3 270,1952,1706, 0,288,2298, +,+,+, 615646 Satellite W-chromosome 585 chrUn_NT_465063v1 11901 14974 GGXHOI 389 + 11901 14974 0 2 2473,558, 0,2515, +,+, 615647 Satellite W-chromosome 585 chrUn_NT_465063v1 16808 19084 GGXHOI 391 + 16808 19084 0 2 636,1582, 0,694, +,+, 615650 Satellite W-chromosome 585 chrUn_NT_465064v1 1405 1815 (CAAGG)n 544 + 1405 1815 0 2 193,176, 0,234, +,+, 615659 Simple_repeat Simple_repeat 585 chrUn_NT_465064v1 1860 2984 (CAAGG)n 604 + 1860 2984 0 3 397,286,77, 0,408,1047, +,+,+, 615661 Simple_repeat Simple_repeat 585 chrUn_NT_465064v1 4191 16535 GGXHOI 417 + 4191 16535 0 12 393,704,1130,1138,1144,1144,1143,1049,1228,1144,1145,727, 0,454,1178,2328,3486,4650,5814,6977,8040,9288,10452,11617, +,+,+,+,+,+,+,+,+,+,+,+, 615668 Satellite W-chromosome 585 chrUn_NT_465064v1 16773 20334 GGXHOI 416 + 16773 20334 0 4 1227,935,1082,259, 0,1247,2205,3302, +,+,+,+, 615670 Satellite W-chromosome 585 chrUn_NT_465065v1 13260 20372 GGXHOI 413 - 13260 20372 0 10 483,146,1039,147,785,1140,1091,1057,505,559, 0,495,654,1713,1874,2679,3839,4950,6027,6553, -,-,-,-,-,-,-,-,-,-, 615672 Satellite W-chromosome 585 chrUn_NT_465066v1 7747 8235 GGLTR3F2 794 + 7747 8235 0 2 223,210, 0,278, +,+, 615679 LTR ERVL 585 chrUn_NT_465066v1 17313 17614 GGLTR3E1 735 - 17313 17614 0 2 137,164, 0,137, -,-, 615688 LTR ERVL 585 chrUn_NT_465067v1 2442 3065 CR1-H 685 - 2442 3065 0 2 139,478, 0,145, -,-, 615693 LINE CR1 585 chrUn_NT_465067v1 5910 6362 CR1-H 671 - 5910 6362 0 2 160,292, 0,160, -,-, 615697 LINE CR1 585 chrUn_NT_465067v1 19307 19763 CR1-H 679 - 19307 19763 0 2 160,296, 0,160, -,-, 615714 LINE CR1 585 chrUn_NT_465068v1 9851 11207 CR1-H 678 + 9851 11207 0 2 1243,113, 0,1243, +,+, 615725 LINE CR1 585 chrUn_NT_465068v1 13266 13888 CR1-H 665 + 13266 13888 0 2 477,139, 0,483, +,+, 615728 LINE CR1 585 chrUn_NT_465069v1 5710 6833 CR1-B2 707 + 5710 6833 0 2 225,895, 0,228, +,+, 615737 LINE CR1 585 chrUn_NT_465070v1 5787 8021 GGERVL-B-int 720 - 5787 8021 0 3 797,936,296, 0,1002,1938, -,-,-, 615751 LTR ERVL 585 chrUn_NT_465070v1 10786 11210 (CAGGC)n 466 + 10786 11210 0 2 220,177, 0,247, +,+, 615758 Simple_repeat Simple_repeat 585 chrUn_NT_465070v1 11936 12456 (CAAGG)n 536 + 11936 12456 0 2 286,53, 0,467, +,+, 615764 Simple_repeat Simple_repeat 585 chrUn_NT_465072v1 9232 13029 GGXHOI 376 - 9232 13029 0 8 143,981,546,684,143,138,90,927, 0,158,1188,1749,2457,2612,2766,2870, -,-,-,-,-,-,-,-, 615792 Satellite W-chromosome 585 chrUn_NT_465072v1 13144 20345 GGXHOI 376 - 13144 20345 0 7 268,551,617,1353,1071,966,2234, 0,286,883,1517,2892,3981,4967, -,-,-,-,-,-,-, 615793 Satellite W-chromosome 585 chrUn_NT_465073v1 986 1634 CR1-E 310 - 986 1634 0 2 411,204, 0,444, -,-, 615796 LINE CR1 585 chrUn_NT_465073v1 3073 3621 CR1-C4 443 - 3073 3621 0 2 158,390, 0,158, -,-, 615801 LINE CR1 585 chrUn_NT_465073v1 15354 15697 CR1-D2 546 - 15354 15697 0 2 216,125, 0,218, -,-, 615814 LINE CR1 585 chrUn_NT_465074v1 1662 3216 GGXHOI 391 - 1662 3216 0 3 103,486,910, 0,124,644, -,-,-, 615827 Satellite W-chromosome 585 chrUn_NT_465074v1 3272 3781 GGXHOI 336 - 3272 3781 0 2 269,220, 0,289, -,-, 615830 Satellite W-chromosome 585 chrUn_NT_465074v1 5029 7189 GGXHOI 351 - 5029 7189 0 3 666,69,511, 0,687,1649, -,-,-, 615833 Satellite W-chromosome 585 chrUn_NT_465074v1 7581 9344 GGXHOI 365 - 7581 9344 0 4 462,410,310,490, 0,518,941,1273, -,-,-,-, 615838 Satellite W-chromosome 585 chrUn_NT_465074v1 10099 11352 GGXHOI 357 - 10099 11352 0 2 729,503, 0,750, -,-, 615841 Satellite W-chromosome 585 chrUn_NT_465074v1 11386 13366 GGXHOI 399 - 11386 13366 0 3 695,425,826, 0,714,1154, -,-,-, 615843 Satellite W-chromosome 585 chrUn_NT_465074v1 13400 15068 GGXHOI 396 - 13400 15068 0 3 692,424,519, 0,711,1149, -,-,-, 615845 Satellite W-chromosome 585 chrUn_NT_465074v1 15269 15899 (CCTTG)n 606 + 15269 15899 0 3 213,200,175, 0,219,455, +,+,+, 615847 Simple_repeat Simple_repeat 585 chrUn_NT_465074v1 15927 16994 (CCTTG)n 639 + 15927 16994 0 3 633,190,223, 0,654,844, +,+,+, 615849 Simple_repeat Simple_repeat 585 chrUn_NT_465074v1 17053 17531 (CCTTG)n 628 + 17053 17531 0 2 170,130, 0,348, +,+, 615851 Simple_repeat Simple_repeat 585 chrUn_NT_465074v1 17582 18354 (CCTTG)n 659 + 17582 18354 0 3 180,267,117, 0,206,655, +,+,+, 615854 Simple_repeat Simple_repeat 585 chrUn_NT_465074v1 18263 18710 (GCCTG)n 474 + 18263 18710 0 2 121,146, 0,301, +,+, 615856 Simple_repeat Simple_repeat 585 chrUn_NT_465074v1 18690 20333 (CCTTG)n 569 + 18690 20333 0 5 403,337,414,218,219, 0,411,760,1174,1424, +,+,+,+,+, 615858 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 5418 6863 (CAAGG)n 550 + 5418 6863 0 2 230,176, 0,1269, +,+, 615865 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 5648 6426 (CAGGC)n 465 + 5648 6426 0 2 342,436, 0,342, +,+, 615866 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 7269 10848 GGLTR7A 608 - 7269 10848 0 2 345,3152, 0,427, -,-, 615871 LTR ERV1 585 chrUn_NT_465075v1 11195 11745 (CAAGG)n 488 + 11195 11745 0 2 238,134, 0,416, +,+, 615875 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 11819 12829 (CAAGG)n 517 + 11819 12829 0 3 235,42,544, 0,424,466, +,+,+, 615878 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 12851 13244 (CAAGG)n 576 + 12851 13244 0 2 153,213, 0,180, +,+, 615881 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 13236 13671 (CAGGC)n 528 + 13236 13671 0 2 160,92, 0,343, +,+, 615882 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 14523 14975 (CAGGC)n 564 + 14523 14975 0 2 153,114, 0,338, +,+, 615891 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 15072 15703 (CAGGC)n 478 + 15072 15703 0 2 207,245, 0,386, +,+, 615894 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 15469 15961 (CAAGG)n 634 + 15469 15961 0 2 264,43, 0,449, +,+, 615896 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 16017 18038 (CAAGG)n 641 + 16017 18038 0 7 180,181,164,220,253,305,145, 0,180,539,719,939,1207,1876, +,+,+,+,+,+,+, 615899 Simple_repeat Simple_repeat 585 chrUn_NT_465075v1 18066 18864 (CAAGG)n 588 + 18066 18864 0 2 319,203, 0,595, +,+, 615903 Simple_repeat Simple_repeat 585 chrUn_NT_465077v1 19170 20039 GGXHOI 518 - 19170 20039 0 2 278,154, 0,715, -,-, 615945 Satellite W-chromosome 585 chrUn_NT_465078v1 2894 4505 GGXHOI 373 - 2894 4505 0 2 509,1039, 0,572, -,-, 615952 Satellite W-chromosome 585 chrUn_NT_465078v1 6886 8402 GGXHOI 374 - 6886 8402 0 2 1070,383, 0,1133, -,-, 615957 Satellite W-chromosome 585 chrUn_NT_465078v1 10372 11680 GGXHOI 356 - 10372 11680 0 2 996,262, 0,1046, -,-, 615960 Satellite W-chromosome 585 chrUn_NT_465078v1 12434 13956 GGXHOI 365 - 12434 13956 0 2 1078,383, 0,1139, -,-, 615962 Satellite W-chromosome 585 chrUn_NT_465078v1 15278 16879 GGXHOI 363 - 15278 16879 0 2 502,1038, 0,563, -,-, 615965 Satellite W-chromosome 585 chrUn_NT_465078v1 17058 20299 GGXHOI 373 - 17058 20299 0 3 999,1079,1040, 0,1061,2201, -,-,-, 615966 Satellite W-chromosome 585 chrUn_NT_465079v1 13105 20323 GGXHOI 380 - 13105 20323 0 8 111,977,1007,912,880,1862,1014,276, 0,131,1128,2157,3121,4021,5903,6942, -,-,-,-,-,-,-,-, 615968 Satellite W-chromosome 585 chrUn_NT_465082v1 4479 6630 GGXHOI 574 - 4479 6630 0 2 147,1564, 0,587, -,-, 616022 Satellite W-chromosome 585 chrUn_NT_465082v1 11333 12187 GGXHOI 602 - 11333 12187 0 2 162,649, 0,205, -,-, 616027 Satellite W-chromosome 585 chrUn_NT_465082v1 12199 16773 GGXHOI 558 - 12199 16773 0 2 1404,846, 0,3728, -,-, 616029 Satellite W-chromosome 585 chrUn_NT_465082v1 16835 20323 GGXHOI 527 - 16835 20323 0 5 1059,236,45,946,347, 0,1075,1644,1714,3141, -,-,-,-,-, 616032 Satellite W-chromosome 585 chrUn_NT_465083v1 2381 7898 GGXHOI 412 + 2381 7898 0 2 3080,2417, 0,3100, +,+, 616037 Satellite W-chromosome 585 chrUn_NT_465083v1 10331 18852 GGXHOI 416 + 10331 18852 0 4 635,1576,4679,1543, 0,650,2284,6978, +,+,+,+, 616039 Satellite W-chromosome 585 chrUn_NT_465084v1 6771 7188 (GATATG)n 350 + 6771 7188 0 2 61,12, 0,405, +,+, 616045 Simple_repeat Simple_repeat 585 chrUn_NT_465084v1 10503 10723 CR1-H 686 + 10503 10723 0 2 96,116, 0,104, +,+, 616051 LINE CR1 585 chrUn_NT_465084v1 10721 11568 Z-REP 523 + 10721 11568 0 2 440,324, 0,523, +,+, 616052 Satellite macro 585 chrUn_NT_465084v1 16084 18124 GGLTR7-int 643 - 16084 18124 0 4 35,50,762,536, 0,35,715,1504, -,-,-,-, 616056 LTR ERV1 585 chrUn_NT_465085v1 4659 17985 GGXHOI 564 + 4659 17985 0 8 97,117,22,106,185,94,70,3207, 0,522,1386,2597,3136,3884,8513,10119, +,+,+,+,+,+,+,+, 616065 Satellite W-chromosome 585 chrUn_NT_465085v1 18029 20321 GGXHOI 570 + 18029 20321 0 3 1242,100,253, 0,1665,2039, +,+,+, 616074 Satellite W-chromosome 585 chrUn_NT_465087v1 1092 2801 CR1-G 507 - 1092 2801 0 3 387,156,597, 0,704,1112, -,-,-, 616081 LINE CR1 585 chrUn_NT_465088v1 4473 5267 GGXHOI 378 - 4473 5267 0 2 403,371, 0,423, -,-, 616096 Satellite W-chromosome 585 chrUn_NT_465088v1 8104 10631 GGXHOI 377 - 8104 10631 0 5 272,453,907,402,363, 0,287,779,1742,2164, -,-,-,-,-, 616102 Satellite W-chromosome 585 chrUn_NT_465088v1 19146 19967 GGXHOI 360 - 19146 19967 0 2 368,411, 0,410, -,-, 616118 Satellite W-chromosome 585 chrUn_NT_465089v1 12224 14689 GGLTR7-int 600 + 12224 14689 0 2 338,794, 0,1671, +,+, 616134 LTR ERV1 585 chrUn_NT_465089v1 14701 17120 GGERV10_LTR 874 - 14701 17120 0 2 38,41, 0,2378, -,-, 616137 LTR ERVL 585 chrUn_NT_465089v1 14866 17078 GGLTR10D-int 926 - 14866 17078 0 2 364,1845, 0,367, -,-, 616138 LTR ERVK 585 chrUn_NT_465089v1 17126 17994 (CGAGG)n 627 + 17126 17994 0 4 180,242,228,216, 0,182,424,652, +,+,+,+, 616139 Simple_repeat Simple_repeat 585 chrUn_NT_465089v1 18250 18880 (CGAGG)n 647 + 18250 18880 0 2 217,364, 0,266, +,+, 616143 Simple_repeat Simple_repeat 585 chrUn_NT_465090v1 10102 10753 GGERVK1-int 387 - 10102 10753 0 2 86,105, 0,546, -,-, 616156 LTR ERVK 585 chrUn_NT_465091v1 4685 5142 CR1-H 677 - 4685 5142 0 2 163,294, 0,163, -,-, 616170 LINE CR1 585 chrUn_NT_465093v1 851 1419 GGXHOI 424 - 851 1419 0 2 398,142, 0,426, -,-, 616193 Satellite W-chromosome 585 chrUn_NT_465094v1 1185 1883 CR1-B2 695 - 1185 1883 0 2 469,226, 0,472, -,-, 616208 LINE CR1 585 chrUn_NT_465094v1 6498 7719 CR1-X 509 + 6498 7719 0 4 97,171,78,50, 0,912,1083,1171, +,+,+,+, 616212 LINE CR1 585 chrUn_NT_465094v1 12078 13201 CR1-B2 704 + 12078 13201 0 2 225,895, 0,228, +,+, 616216 LINE CR1 585 chrUn_NT_465094v1 18736 19299 CR1-X 442 + 18736 19299 0 3 168,132,221, 0,168,342, +,+,+, 616226 LINE CR1 585 chrUn_NT_465095v1 17837 18377 GGXHOI 525 + 17837 18377 0 2 369,157, 0,383, +,+, 616247 Satellite W-chromosome 585 chrUn_NT_465096v1 38 665 (CAGGC)n 506 + 38 665 0 2 211,235, 0,392, +,+, 616251 Simple_repeat Simple_repeat 585 chrUn_NT_465096v1 661 1220 (CAAGG)n 548 + 661 1220 0 2 309,69, 0,490, +,+, 616253 Simple_repeat Simple_repeat 585 chrUn_NT_465096v1 970 1420 (CAGGC)n 536 + 970 1420 0 2 181,269, 0,181, +,+, 616254 Simple_repeat Simple_repeat 585 chrUn_NT_465096v1 12169 13466 GGLTR7-int 281 - 12169 13466 0 2 282,242, 0,1055, -,-, 616267 LTR ERV1 585 chrUn_NT_465096v1 14314 17124 GGERVL-B-int 720 - 14314 17124 0 2 913,1860, 0,950, -,-, 616269 LTR ERVL 585 chrUn_NT_465096v1 19639 20203 (CAAGG)n 520 + 19639 20203 0 2 163,29, 0,535, +,+, 616274 Simple_repeat Simple_repeat 585 chrUn_NT_465097v1 182 1572 GGXHOI 478 - 182 1572 0 2 962,386, 0,1004, -,-, 616278 Satellite W-chromosome 585 chrUn_NT_465097v1 2711 4158 GGXHOI 500 - 2711 4158 0 2 1004,217, 0,1230, -,-, 616280 Satellite W-chromosome 585 chrUn_NT_465097v1 4275 5781 GGXHOI 516 - 4275 5781 0 2 1068,212, 0,1294, -,-, 616282 Satellite W-chromosome 585 chrUn_NT_465097v1 5853 7189 GGXHOI 540 - 5853 7189 0 3 215,222,867, 0,230,469, -,-,-, 616284 Satellite W-chromosome 585 chrUn_NT_465097v1 7476 8951 GGXHOI 532 - 7476 8951 0 2 1044,199, 0,1276, -,-, 616285 Satellite W-chromosome 585 chrUn_NT_465097v1 15225 16719 GGXHOI 490 - 15225 16719 0 2 166,1317, 0,177, -,-, 616291 Satellite W-chromosome 585 chrUn_NT_465097v1 16802 17886 GGXHOI 499 - 16802 17886 0 2 453,608, 0,476, -,-, 616292 Satellite W-chromosome 585 chrUn_NT_465098v1 7114 10644 GGLTR7-int 404 + 7114 10644 0 4 103,1609,935,272, 0,570,2274,3258, +,+,+,+, 616306 LTR ERV1 585 chrUn_NT_465099v1 19017 20213 GGERVL-A-int 754 + 19017 20213 0 2 457,739, 0,457, +,+, 616329 LTR ERVL 585 chrUn_NT_465100v1 17980 18250 (ACCCATAGAG)n 462 - 17980 18250 0 2 111,129, 0,141, -,-, 616342 Satellite Satellite 585 chrUn_NT_465101v1 2317 3510 GGXHOI 329 - 2317 3510 0 3 194,335,577, 0,237,616, -,-,-, 616345 Satellite W-chromosome 585 chrUn_NT_465101v1 4670 8591 GGXHOI 359 - 4670 8591 0 4 719,2117,255,688, 0,780,2938,3233, -,-,-,-, 616347 Satellite W-chromosome 585 chrUn_NT_465101v1 11646 12796 GGXHOI 456 - 11646 12796 0 2 944,151, 0,999, -,-, 616350 Satellite W-chromosome 585 chrUn_NT_465101v1 12980 15740 GGXHOI 437 - 12980 15740 0 2 877,1826, 0,934, -,-, 616351 Satellite W-chromosome 585 chrUn_NT_465101v1 15892 19095 GGXHOI 390 - 15892 19095 0 2 469,2675, 0,528, -,-, 616352 Satellite W-chromosome 585 chrUn_NT_465101v1 19171 20156 GGXHOI 353 - 19171 20156 0 3 307,313,292, 0,322,693, -,-,-, 616353 Satellite W-chromosome 585 chrUn_NT_465102v1 4951 6336 GGXHOI 346 - 4951 6336 0 3 505,280,539, 0,545,846, -,-,-, 616357 Satellite W-chromosome 585 chrUn_NT_465102v1 6514 8442 GGXHOI 398 - 6514 8442 0 2 1119,766, 0,1162, -,-, 616358 Satellite W-chromosome 585 chrUn_NT_465102v1 8728 9139 GGXHOI 454 - 8728 9139 0 2 246,150, 0,261, -,-, 616359 Satellite W-chromosome 585 chrUn_NT_465102v1 11313 13319 GGXHOI 413 - 11313 13319 0 4 597,608,96,617, 0,610,1230,1389, -,-,-,-, 616363 Satellite W-chromosome 585 chrUn_NT_465102v1 16414 17877 GGXHOI 438 - 16414 17877 0 2 716,691, 0,772, -,-, 616366 Satellite W-chromosome 585 chrUn_NT_465102v1 18131 18950 GGXHOI 376 - 18131 18950 0 3 140,284,322, 0,156,497, -,-,-, 616367 Satellite W-chromosome 585 chrUn_NT_465103v1 983 1580 (CCTTG)n 476 + 983 1580 0 2 346,75, 0,522, +,+, 616374 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 2122 3007 (CAAGG)n 529 + 2122 3007 0 4 169,250,178,225, 0,190,457,660, +,+,+,+, 616378 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 3129 3377 (CCTTG)n 485 + 3129 3377 0 2 180,24, 0,224, +,+, 616380 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 3739 4075 (CCTTG)n 526 + 3739 4075 0 2 112,54, 0,282, +,+, 616384 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 4331 4822 (CCTTG)n 479 + 4331 4822 0 2 242,223, 0,268, +,+, 616388 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 5224 6111 (CAAGG)n 517 + 5224 6111 0 4 169,155,114,225, 0,186,522,662, +,+,+,+, 616393 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 6293 7033 (CCTTG)n 520 + 6293 7033 0 3 144,178,54, 0,338,686, +,+,+, 616396 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 7289 7780 (CCTTG)n 479 + 7289 7780 0 2 242,223, 0,268, +,+, 616401 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 8634 9145 (CAAGG)n 580 + 8634 9145 0 2 174,337, 0,174, +,+, 616408 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 9144 9565 (CCTTG)n 485 + 9144 9565 0 2 174,223, 0,198, +,+, 616409 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 9964 10849 (CAAGG)n 519 + 9964 10849 0 4 167,155,114,225, 0,184,520,660, +,+,+,+, 616414 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 11031 11771 (CCTTG)n 520 + 11031 11771 0 2 516,54, 0,686, +,+, 616417 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 12026 12515 (CCTTG)n 482 + 12026 12515 0 2 241,223, 0,266, +,+, 616420 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 12938 13857 (CAAGG)n 513 + 12938 13857 0 3 139,201,375, 0,319,544, +,+,+, 616424 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 13882 14305 (CCTTG)n 485 + 13882 14305 0 2 174,223, 0,200, +,+, 616426 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 14967 15591 (CAAGG)n 532 + 14967 15591 0 2 374,226, 0,398, +,+, 616432 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 15772 16511 (CCTTG)n 518 + 15772 16511 0 3 144,178,54, 0,338,685, +,+,+, 616434 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 17979 18580 (CAAGG)n 523 + 17979 18580 0 3 187,198,179, 0,209,422, +,+,+, 616444 Simple_repeat Simple_repeat 585 chrUn_NT_465103v1 18650 19024 (CCTTG)n 487 + 18650 19024 0 2 185,172, 0,202, +,+, 616445 Simple_repeat Simple_repeat 585 chrUn_NT_465104v1 2409 4029 GGXHOI 383 + 2409 4029 0 2 1046,511, 0,1109, +,+, 616454 Satellite W-chromosome 585 chrUn_NT_465104v1 4658 6811 GGXHOI 385 + 4658 6811 0 2 1083,1008, 0,1145, +,+, 616456 Satellite W-chromosome 585 chrUn_NT_465104v1 6951 8604 GGXHOI 370 + 6951 8604 0 2 1081,509, 0,1144, +,+, 616457 Satellite W-chromosome 585 chrUn_NT_465104v1 9847 11341 GGXHOI 375 + 9847 11341 0 2 474,1003, 0,491, +,+, 616460 Satellite W-chromosome 585 chrUn_NT_465104v1 11521 13128 GGXHOI 380 + 11521 13128 0 2 1036,508, 0,1099, +,+, 616461 Satellite W-chromosome 585 chrUn_NT_465104v1 16097 19311 GGXHOI 381 + 16097 19311 0 2 1046,2105, 0,1109, +,+, 616466 Satellite W-chromosome 585 chrUn_NT_465105v1 1788 4289 GGXHOI 420 - 1788 4289 0 3 1697,231,514, 0,1740,1987, -,-,-, 616469 Satellite W-chromosome 585 chrUn_NT_465105v1 4356 6479 GGXHOI 352 - 4356 6479 0 4 144,772,137,976, 0,189,995,1147, -,-,-,-, 616470 Satellite W-chromosome 585 chrUn_NT_465105v1 6641 18145 GGXHOI 425 - 6641 18145 0 7 260,930,3460,2150,1257,627,2610, 0,295,1249,4733,6935,8252,8894, -,-,-,-,-,-,-, 616471 Satellite W-chromosome 585 chrUn_NT_465105v1 18275 20148 GGXHOI 340 - 18275 20148 0 4 201,677,699,240, 0,217,915,1633, -,-,-,-, 616472 Satellite W-chromosome 585 chrUn_NT_465106v1 2838 4956 GGXHOI 384 + 2838 4956 0 2 1046,1009, 0,1109, +,+, 616474 Satellite W-chromosome 585 chrUn_NT_465106v1 7172 8795 GGXHOI 391 + 7172 8795 0 2 1044,516, 0,1107, +,+, 616478 Satellite W-chromosome 585 chrUn_NT_465106v1 9552 11322 GGXHOI 376 + 9552 11322 0 2 634,1079, 0,691, +,+, 616480 Satellite W-chromosome 585 chrUn_NT_465106v1 11386 13039 GGXHOI 372 + 11386 13039 0 2 1084,506, 0,1147, +,+, 616481 Satellite W-chromosome 585 chrUn_NT_465106v1 13138 15071 GGXHOI 389 + 13138 15071 0 2 1407,509, 0,1424, +,+, 616482 Satellite W-chromosome 585 chrUn_NT_465106v1 15170 17205 GGXHOI 384 + 15170 17205 0 2 1465,508, 0,1527, +,+, 616483 Satellite W-chromosome 585 chrUn_NT_465107v1 2743 3794 GGXHOI 378 - 2743 3794 0 2 516,472, 0,579, -,-, 616489 Satellite W-chromosome 585 chrUn_NT_465107v1 3893 4942 GGXHOI 378 - 3893 4942 0 2 514,472, 0,577, -,-, 616490 Satellite W-chromosome 585 chrUn_NT_465107v1 13951 14892 GGXHOI 351 - 13951 14892 0 2 501,379, 0,562, -,-, 616504 Satellite W-chromosome 585 chrUn_NT_465108v1 12785 13301 A-rich 415 + 12785 13301 0 2 92,362, 0,154, +,+, 616559 Low_complexity Low_complexity 585 chrUn_NT_465110v1 1695 3343 GGXHOI 375 + 1695 3343 0 2 1078,508, 0,1140, +,+, 616617 Satellite W-chromosome 585 chrUn_NT_465110v1 5119 7262 GGXHOI 382 + 5119 7262 0 2 1075,1005, 0,1138, +,+, 616621 Satellite W-chromosome 585 chrUn_NT_465110v1 10218 11760 GGXHOI 383 + 10218 11760 0 2 477,1009, 0,533, +,+, 616625 Satellite W-chromosome 585 chrUn_NT_465110v1 14808 15859 GGXHOI 390 + 14808 15859 0 2 472,516, 0,535, +,+, 616629 Satellite W-chromosome 585 chrUn_NT_465110v1 15958 16967 GGXHOI 392 + 15958 16967 0 2 476,475, 0,534, +,+, 616630 Satellite W-chromosome 585 chrUn_NT_465110v1 17066 18115 GGXHOI 391 + 17066 18115 0 2 472,514, 0,535, +,+, 616631 Satellite W-chromosome 585 chrUn_NT_465111v1 5201 7608 GGLTR3F1 782 - 5201 7608 0 2 1920,485, 0,1922, -,-, 616638 LTR ERVL 585 chrUn_NT_465111v1 17445 18073 GGERVK10-int 299 + 17445 18073 0 3 87,141,86, 0,261,542, +,+,+, 616647 LTR ERVK 585 chrUn_NT_465112v1 819 2476 GGXHOI 358 - 819 2476 0 4 477,378,453,276, 0,497,890,1381, -,-,-,-, 616650 Satellite W-chromosome 585 chrUn_NT_465112v1 3720 5406 GGXHOI 367 - 3720 5406 0 3 252,915,449, 0,272,1237, -,-,-, 616653 Satellite W-chromosome 585 chrUn_NT_465112v1 6002 6678 GGXHOI 354 - 6002 6678 0 2 252,401, 0,275, -,-, 616655 Satellite W-chromosome 585 chrUn_NT_465112v1 7887 8679 GGXHOI 379 - 7887 8679 0 2 288,485, 0,307, -,-, 616658 Satellite W-chromosome 585 chrUn_NT_465112v1 10638 12649 GGXHOI 381 - 10638 12649 0 2 386,1602, 0,409, -,-, 616663 Satellite W-chromosome 585 chrUn_NT_465112v1 12736 14450 GGXHOI 389 - 12736 14450 0 4 357,765,143,359, 0,377,1199,1355, -,-,-,-, 616664 Satellite W-chromosome 585 chrUn_NT_465112v1 14632 15824 GGXHOI 395 - 14632 15824 0 3 400,375,361, 0,420,831, -,-,-, 616665 Satellite W-chromosome 585 chrUn_NT_465112v1 16518 17108 GGXHOI 394 - 16518 17108 0 2 386,146, 0,444, -,-, 616667 Satellite W-chromosome 585 chrUn_NT_465112v1 17623 18723 GGXHOI 335 - 17623 18723 0 3 301,418,352, 0,317,748, -,-,-, 616669 Satellite W-chromosome 585 chrUn_NT_465113v1 16068 16860 CR1-F 263 + 16068 16860 0 2 219,557, 0,235, +,+, 616681 LINE CR1 585 chrUn_NT_465114v1 18601 19926 GGXHOI 394 + 18601 19926 0 2 529,740, 0,585, +,+, 616685 Satellite W-chromosome 585 chrUn_NT_465115v1 4243 4907 GGLTR11-int 390 + 4243 4907 0 2 128,360, 0,304, +,+, 616696 LTR ERV1 585 chrUn_NT_465115v1 17656 19613 GGLTR7-int 619 - 17656 19613 0 4 33,74,709,382, 0,34,738,1575, -,-,-,-, 616709 LTR ERV1 585 chrUn_NT_465116v1 3823 4982 CR1-F 798 + 3823 4982 0 2 342,292, 0,867, +,+, 616715 LINE CR1 585 chrUn_NT_465117v1 5092 5649 GGXHOI 372 + 5092 5649 0 2 266,274, 0,283, +,+, 616730 Satellite W-chromosome 585 chrUn_NT_465117v1 6989 7475 GGXHOI 307 + 6989 7475 0 2 254,179, 0,307, +,+, 616733 Satellite W-chromosome 585 chrUn_NT_465117v1 8578 10825 GGXHOI 339 + 8578 10825 0 3 1264,684,267, 0,1280,1980, +,+,+, 616735 Satellite W-chromosome 585 chrUn_NT_465117v1 13206 15577 GGXHOI 362 + 13206 15577 0 3 635,706,954, 0,691,1417, +,+,+, 616740 Satellite W-chromosome 585 chrUn_NT_465117v1 15757 17288 GGXHOI 369 + 15757 17288 0 2 553,921, 0,610, +,+, 616741 Satellite W-chromosome 585 chrUn_NT_465117v1 17589 19279 GGXHOI 377 + 17589 19279 0 2 551,1083, 0,607, +,+, 616742 Satellite W-chromosome 585 chrUn_NT_465119v1 14479 15040 A-rich 568 + 14479 15040 0 2 470,56, 0,505, +,+, 616798 Low_complexity Low_complexity 585 chrUn_NT_465121v1 9230 10280 GGXHOI 378 - 9230 10280 0 2 515,472, 0,578, -,-, 616836 Satellite W-chromosome 585 chrUn_NT_465121v1 12268 14132 GGXHOI 386 - 12268 14132 0 2 753,1048, 0,816, -,-, 616839 Satellite W-chromosome 585 chrUn_NT_465121v1 15729 16863 GGXHOI 376 - 15729 16863 0 2 684,387, 0,747, -,-, 616842 Satellite W-chromosome 585 chrUn_NT_465122v1 6919 7409 GGLTR3F2 612 + 6919 7409 0 2 232,212, 0,278, +,+, 616849 LTR ERVL 585 chrUn_NT_465122v1 8403 8771 GGERVK10-int 327 - 8403 8771 0 2 81,140, 0,228, -,-, 616852 LTR ERVK 585 chrUn_NT_465123v1 1354 1827 GGLTR3F2 782 + 1354 1827 0 2 232,209, 0,264, +,+, 616864 LTR ERVL 585 chrUn_NT_465123v1 2817 3463 GGERVK10-int 314 - 2817 3463 0 3 82,141,106, 0,225,540, -,-,-, 616867 LTR ERVK 585 chrUn_NT_465124v1 3401 5149 GGERVL-A-int 751 - 3401 5149 0 2 1292,456, 0,1292, -,-, 616877 LTR ERVL 585 chrUn_NT_465125v1 1230 2632 (CCTTG)n 544 + 1230 2632 0 5 176,26,96,97,205, 0,361,637,901,1197, +,+,+,+,+, 616893 Simple_repeat Simple_repeat 585 chrUn_NT_465125v1 13468 14744 CR1-H 518 + 13468 14744 0 2 1156,120, 0,1156, +,+, 616910 LINE CR1 585 chrUn_NT_465125v1 16606 17231 CR1-H 672 + 16606 17231 0 2 481,137, 0,488, +,+, 616913 LINE CR1 585 chrUn_NT_465126v1 506 737 (CAAGG)n 459 + 506 737 0 2 24,183, 0,48, +,+, 616919 Simple_repeat Simple_repeat 585 chrUn_NT_465126v1 879 1482 (CCTTG)n 534 + 879 1482 0 2 226,353, 0,250, +,+, 616921 Simple_repeat Simple_repeat 585 chrUn_NT_465126v1 2215 3411 (CAAGG)n 472 + 2215 3411 0 5 141,314,198,282,25, 0,163,477,703,1171, +,+,+,+,+, 616926 Simple_repeat Simple_repeat 585 chrUn_NT_465126v1 3465 4399 (CCTTG)n 464 + 3465 4399 0 2 202,716, 0,218, +,+, 616928 Simple_repeat Simple_repeat 585 chrUn_NT_465126v1 12616 13667 GGXHOI 377 - 12616 13667 0 2 516,472, 0,579, -,-, 616937 Satellite W-chromosome 585 chrUn_NT_465127v1 16902 17819 (CTCTATGGGG)n 500 + 16902 17819 0 5 185,20,244,120,123, 0,307,363,642,794, +,+,+,+,+, 616965 Satellite Satellite 585 chrUn_NT_465127v1 18087 18421 (CTCTATGGGG)n 510 + 18087 18421 0 2 123,199, 0,135, +,+, 616968 Satellite Satellite 585 chrUn_NT_465129v1 1540 6149 CR1-H 555 + 1540 6149 0 2 2358,840, 0,3769, +,+, 616973 LINE CR1 585 chrUn_NT_465129v1 18376 20021 Z-REP 391 + 18376 20021 0 4 288,457,237,241, 0,580,1076,1404, +,+,+,+, 616981 Satellite macro 585 chrUn_NT_465130v1 2270 3632 GGXHOI 451 - 2270 3632 0 4 363,175,327,208, 0,415,602,1154, -,-,-,-, 616985 Satellite W-chromosome 585 chrUn_NT_465130v1 4848 6164 GGXHOI 446 - 4848 6164 0 2 899,218, 0,1098, -,-, 616991 Satellite W-chromosome 585 chrUn_NT_465130v1 7802 8368 GGXHOI 420 - 7802 8368 0 3 118,247,150, 0,139,416, -,-,-, 616994 Satellite W-chromosome 585 chrUn_NT_465130v1 9288 10738 GGXHOI 474 - 9288 10738 0 3 156,1143,119, 0,170,1331, -,-,-, 616996 Satellite W-chromosome 585 chrUn_NT_465130v1 13844 15322 GGXHOI 452 - 13844 15322 0 2 136,1325, 0,153, -,-, 616999 Satellite W-chromosome 585 chrUn_NT_465130v1 15391 16787 GGXHOI 424 - 15391 16787 0 4 343,272,586,123, 0,365,663,1273, -,-,-,-, 617000 Satellite W-chromosome 585 chrUn_NT_465130v1 18356 19794 GGXHOI 510 - 18356 19794 0 2 976,268, 0,1170, -,-, 617002 Satellite W-chromosome 585 chrUn_NT_465131v1 4823 5043 CR1-H 650 + 4823 5043 0 2 97,115, 0,105, +,+, 617012 LINE CR1 585 chrUn_NT_465131v1 10242 12162 GGLTR7-int 642 - 10242 12162 0 4 33,74,656,525, 0,34,739,1395, -,-,-,-, 617017 LTR ERV1 585 chrUn_NT_465132v1 9134 10672 GGXHOI 379 - 9134 10672 0 2 1007,469, 0,1069, -,-, 617035 Satellite W-chromosome 585 chrUn_NT_465132v1 17533 18578 GGXHOI 375 - 17533 18578 0 2 514,468, 0,577, -,-, 617045 Satellite W-chromosome 585 chrUn_NT_465133v1 1870 2139 (CAAGG)n 654 + 1870 2139 0 2 46,223, 0,46, +,+, 617055 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 2967 3286 (GCCTG)n 400 + 2967 3286 0 2 98,43, 0,276, +,+, 617061 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 3664 4201 (CAAGG)n 591 + 3664 4201 0 3 46,223,242, 0,46,295, +,+,+, 617065 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 5377 5981 (CCTTG)n 547 + 5377 5981 0 2 225,353, 0,251, +,+, 617070 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 6621 7090 (CAAGG)n 595 + 6621 7090 0 3 46,223,174, 0,46,295, +,+,+, 617077 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 7718 8037 (GCCTG)n 400 + 7718 8037 0 2 98,43, 0,276, +,+, 617081 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 8415 8952 (CAAGG)n 591 + 8415 8952 0 3 46,223,242, 0,46,295, +,+,+, 617085 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 10129 10733 (CCTTG)n 537 + 10129 10733 0 2 225,353, 0,251, +,+, 617090 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 11364 11833 (CAAGG)n 595 + 11364 11833 0 3 46,223,174, 0,46,295, +,+,+, 617096 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 12461 12780 (GCCTG)n 400 + 12461 12780 0 2 98,43, 0,276, +,+, 617100 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 13158 13695 (CAAGG)n 591 + 13158 13695 0 3 46,223,242, 0,46,295, +,+,+, 617104 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 14872 15759 (CCTTG)n 515 + 14872 15759 0 4 225,114,76,169, 0,251,625,718, +,+,+,+, 617108 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 16115 16584 (CAAGG)n 595 + 16115 16584 0 3 46,223,174, 0,46,295, +,+,+, 617113 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 17212 17531 (GCCTG)n 400 + 17212 17531 0 2 98,43, 0,276, +,+, 617117 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 17909 18446 (CAAGG)n 591 + 17909 18446 0 3 46,223,242, 0,46,295, +,+,+, 617121 Simple_repeat Simple_repeat 585 chrUn_NT_465133v1 18703 19508 (CAAGG)n 500 + 18703 19508 0 2 472,298, 0,507, +,+, 617124 Simple_repeat Simple_repeat 585 chrUn_NT_465134v1 2650 4333 GGXHOI 367 - 2650 4333 0 3 821,291,491, 0,841,1192, -,-,-, 617129 Satellite W-chromosome 585 chrUn_NT_465135v1 3697 4652 (CAAGG)n 547 + 3697 4652 0 4 334,176,176,174, 0,351,546,781, +,+,+,+, 617143 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 4740 5585 (CCTTG)n 492 + 4740 5585 0 3 259,307,116, 0,276,729, +,+,+, 617144 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 6006 6275 (CAAGG)n 654 + 6006 6275 0 2 46,223, 0,46, +,+, 617148 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 6202 6543 (CAGGC)n 350 + 6202 6543 0 2 90,73, 0,268, +,+, 617149 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 6799 7698 (CAAGG)n 482 + 6799 7698 0 3 229,18,303, 0,401,596, +,+,+, 617153 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 7696 8325 (CCTTG)n 547 + 7696 8325 0 2 250,353, 0,276, +,+, 617156 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 8917 9361 (CAAGG)n 505 + 8917 9361 0 2 225,219, 0,225, +,+, 617161 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 10053 10372 (GCCTG)n 400 + 10053 10372 0 2 98,43, 0,276, +,+, 617165 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 10395 10750 (CAGGC)n 275 + 10395 10750 0 2 246,85, 0,270, +,+, 617167 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 10750 11020 (CAAGG)n 649 + 10750 11020 0 2 46,224, 0,46, +,+, 617168 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 11545 12285 (CAAGG)n 516 + 11545 12285 0 2 229,404, 0,336, +,+, 617173 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 12445 13074 (CCTTG)n 537 + 12445 13074 0 2 250,353, 0,276, +,+, 617176 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 13705 13973 (CAAGG)n 643 + 13705 13973 0 2 46,222, 0,46, +,+, 617182 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 14195 14795 (CCTTG)n 523 + 14195 14795 0 3 162,30,181, 0,347,419, +,+,+, 617185 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 14802 15121 (GCCTG)n 400 + 14802 15121 0 2 98,43, 0,276, +,+, 617188 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 15478 15915 (CAAGG)n 494 + 15478 15915 0 2 175,238, 0,199, +,+, 617191 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 17257 18166 (CCTTG)n 431 + 17257 18166 0 3 234,510,109, 0,271,800, +,+,+, 617197 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 18510 18779 (CAAGG)n 654 + 18510 18779 0 2 46,223, 0,46, +,+, 617200 Simple_repeat Simple_repeat 585 chrUn_NT_465135v1 18978 19884 (CCTTG)n 524 + 18978 19884 0 4 85,33,325,96, 0,268,305,810, +,+,+,+, 617203 Simple_repeat Simple_repeat 585 chrUn_NT_465136v1 761 3063 GGXHOI 383 - 761 3063 0 2 1954,333, 0,1969, -,-, 617208 Satellite W-chromosome 585 chrUn_NT_465136v1 3144 4088 GGXHOI 373 - 3144 4088 0 2 599,330, 0,614, -,-, 617209 Satellite W-chromosome 585 chrUn_NT_465136v1 4172 5765 GGXHOI 395 - 4172 5765 0 2 785,754, 0,839, -,-, 617210 Satellite W-chromosome 585 chrUn_NT_465136v1 5852 7918 GGXHOI 403 - 5852 7918 0 3 643,1059,334, 0,658,1732, -,-,-, 617211 Satellite W-chromosome 585 chrUn_NT_465136v1 9071 10904 GGXHOI 419 - 9071 10904 0 2 644,1174, 0,659, -,-, 617213 Satellite W-chromosome 585 chrUn_NT_465136v1 11110 13872 GGXHOI 390 - 11110 13872 0 2 645,2094, 0,668, -,-, 617214 Satellite W-chromosome 585 chrUn_NT_465136v1 13956 19167 GGXHOI 394 - 13956 19167 0 7 639,1476,372,723,856,645,333, 0,682,2178,2577,3349,4218,4878, -,-,-,-,-,-,-, 617215 Satellite W-chromosome 585 chrUn_NT_465136v1 19251 19979 GGXHOI 445 - 19251 19979 0 3 358,268,72, 0,377,656, -,-,-, 617216 Satellite W-chromosome 585 chrUn_NT_465138v1 4026 9842 GGLTR3F1 901 + 4026 9842 0 2 494,5321, 0,495, +,+, 617250 LTR ERVL 585 chrUn_NT_465138v1 9842 15679 GGERVL-B-int 893 + 9842 15679 0 3 36,494,5306, 0,36,531, +,+,+, 617251 LTR ERVL 585 chrUn_NT_465138v1 15679 18601 GGERVL-B-int 797 + 15679 18601 0 3 36,493,2392, 0,36,530, +,+,+, 617252 LTR ERVL 585 chrUn_NT_465139v1 6229 7178 GGXHOI 368 - 6229 7178 0 2 141,788, 0,161, -,-, 617259 Satellite W-chromosome 585 chrUn_NT_465139v1 7255 9661 GGXHOI 387 - 7255 9661 0 2 1510,880, 0,1526, -,-, 617260 Satellite W-chromosome 585 chrUn_NT_465139v1 10140 11921 GGXHOI 403 - 10140 11921 0 2 789,977, 0,804, -,-, 617261 Satellite W-chromosome 585 chrUn_NT_465139v1 12199 13080 GGXHOI 406 - 12199 13080 0 2 588,269, 0,612, -,-, 617262 Satellite W-chromosome 585 chrUn_NT_465139v1 13995 15768 GGXHOI 360 - 13995 15768 0 2 979,774, 0,999, -,-, 617264 Satellite W-chromosome 585 chrUn_NT_465139v1 15957 16414 GGXHOI 383 - 15957 16414 0 2 225,180, 0,277, -,-, 617265 Satellite W-chromosome 585 chrUn_NT_465139v1 16957 17807 GGXHOI 421 - 16957 17807 0 2 691,146, 0,704, -,-, 617267 Satellite W-chromosome 585 chrUn_NT_465140v1 2617 7224 CR1-H 557 + 2617 7224 0 2 2357,840, 0,3767, +,+, 617272 LINE CR1 585 chrUn_NT_465140v1 7225 11832 CR1-H 557 + 7225 11832 0 2 2357,840, 0,3767, +,+, 617274 LINE CR1 585 chrUn_NT_465141v1 13728 14350 CR1-H 678 - 13728 14350 0 2 139,477, 0,145, -,-, 617295 LINE CR1 585 chrUn_NT_465141v1 17369 17823 CR1-H 664 - 17369 17823 0 2 159,295, 0,159, -,-, 617299 LINE CR1 585 chrUn_NT_465142v1 3179 4462 (TG)n 747 + 3179 4462 0 8 131,196,184,56,184,58,182,176, 0,151,363,563,635,835,909,1107, +,+,+,+,+,+,+,+, 617308 Simple_repeat Simple_repeat 585 chrUn_NT_465143v1 810 3457 GGXHOI 363 + 810 3457 0 5 610,823,451,453,129, 0,654,1535,2009,2518, +,+,+,+,+, 617326 Satellite W-chromosome 585 chrUn_NT_465143v1 3523 3799 GGXHOI 248 + 3523 3799 0 2 134,127, 0,149, +,+, 617327 Satellite W-chromosome 585 chrUn_NT_465144v1 14159 14789 CR1-C 675 - 14159 14789 0 2 65,565, 0,65, -,-, 617352 LINE CR1 585 chrUn_NT_465144v1 16407 17378 (CCTCG)n 562 + 16407 17378 0 3 233,180,494, 0,270,477, +,+,+, 617357 Simple_repeat Simple_repeat 585 chrUn_NT_465144v1 17518 17904 (CCTTG)n 426 + 17518 17904 0 2 173,181, 0,205, +,+, 617360 Simple_repeat Simple_repeat 585 chrUn_NT_465146v1 1199 1289 GGLTR3F2 810 + 1199 1289 0 2 43,46, 0,44, +,+, 617388 LTR ERVL 585 chrUn_NT_465146v1 1560 2574 GGERVL18-int 443 + 1560 2574 0 2 129,578, 0,436, +,+, 617390 LTR ERVL 585 chrUn_NT_465146v1 3362 5767 GGERVL18-LTR 642 + 3362 5767 0 2 196,267, 0,2138, +,+, 617394 LTR ERVL 585 chrUn_NT_465146v1 3559 5500 GGERVL-A-int 695 + 3559 5500 0 3 505,1025,411, 0,505,1530, +,+,+, 617395 LTR ERVL 585 chrUn_NT_465146v1 5767 7761 GGERVL-B-int 629 + 5767 7761 0 3 455,1473,41, 0,457,1953, +,+,+, 617396 LTR ERVL 585 chrUn_NT_465146v1 7735 14920 GGERVL18-int 660 + 7735 14920 0 5 401,3209,303,1747,334, 0,488,4293,5100,6851, +,+,+,+,+, 617397 LTR ERVL 585 chrUn_NT_465146v1 17360 19952 CR1-G 802 - 17360 19952 0 2 1087,1505, 0,1087, -,-, 617404 LINE CR1 585 chrUn_NT_465148v1 11532 12345 GGXHOI 336 - 11532 12345 0 2 480,275, 0,538, -,-, 617439 Satellite W-chromosome 585 chrUn_NT_465148v1 12984 13487 (CAAGG)n 443 + 12984 13487 0 2 232,234, 0,269, +,+, 617441 Simple_repeat Simple_repeat 585 chrUn_NT_465148v1 13968 14620 (CCTTG)n 463 + 13968 14620 0 2 184,415, 0,237, +,+, 617444 Simple_repeat Simple_repeat 585 chrUn_NT_465148v1 15239 16375 (CAAGG)n 470 + 15239 16375 0 6 193,171,19,176,90,25, 0,213,574,652,839,1111, +,+,+,+,+,+, 617446 Simple_repeat Simple_repeat 585 chrUn_NT_465148v1 16429 16826 (CCTTG)n 438 + 16429 16826 0 2 199,198, 0,199, +,+, 617449 Simple_repeat Simple_repeat 585 chrUn_NT_465148v1 16940 17368 (CCTTG)n 566 + 16940 17368 0 2 235,175, 0,253, +,+, 617451 Simple_repeat Simple_repeat 585 chrUn_NT_465150v1 18264 19900 GGERVL-A-int 658 - 18264 19900 0 2 1311,325, 0,1311, -,-, 617477 LTR ERVL 585 chrUn_NT_465151v1 12318 12574 (CTCTATGGGG)n 483 + 12318 12574 0 2 116,116, 0,140, +,+, 617499 Satellite Satellite 585 chrUn_NT_465152v1 4632 4968 GGERV10_LTR 539 - 4632 4968 0 2 159,85, 0,251, -,-, 617513 LTR ERVL 585 chrUn_NT_465152v1 5050 7154 CR1-D 606 + 5050 7154 0 2 840,987, 0,1117, +,+, 617515 LINE CR1 585 chrUn_NT_465152v1 15110 15446 GGERV10_LTR 545 - 15110 15446 0 2 159,85, 0,251, -,-, 617519 LTR ERVL 585 chrUn_NT_465152v1 15528 17632 CR1-D 619 + 15528 17632 0 2 840,988, 0,1116, +,+, 617521 LINE CR1 585 chrUn_NT_465153v1 3773 8616 GGXHOI 454 + 3773 8616 0 4 472,230,809,3257, 0,488,735,1586, +,+,+,+, 617525 Satellite W-chromosome 585 chrUn_NT_465153v1 8700 19808 GGXHOI 461 + 8700 19808 0 7 1823,778,944,1812,893,1108,3643, 0,1840,2638,3599,5427,6341,7465, +,+,+,+,+,+,+, 617526 Satellite W-chromosome 585 chrUn_NT_465154v1 1858 4580 GGERVL-B-int 707 + 1858 4580 0 4 313,63,1068,916, 0,674,738,1806, +,+,+,+, 617530 LTR ERVL 585 chrUn_NT_465154v1 5421 6718 GGLTR7-int 302 + 5421 6718 0 2 260,282, 0,1015, +,+, 617532 LTR ERV1 585 chrUn_NT_465154v1 17930 18574 CR1-F2 829 - 17930 18574 0 2 339,55, 0,589, -,-, 617547 LINE CR1 585 chrUn_NT_465154v1 18603 19650 (CCTTG)n 515 + 18603 19650 0 4 405,92,29,144, 0,405,685,903, +,+,+,+, 617548 Simple_repeat Simple_repeat 585 chrUn_NT_465154v1 19556 19881 (GCCTG)n 498 + 19556 19881 0 2 179,146, 0,179, +,+, 617551 Simple_repeat Simple_repeat 585 chrUn_NT_465156v1 4768 5653 GGXHOI 566 - 4768 5653 0 2 194,213, 0,672, -,-, 617592 Satellite W-chromosome 585 chrUn_NT_465156v1 5729 6229 GGXHOI 536 - 5729 6229 0 2 20,163, 0,337, -,-, 617594 Satellite W-chromosome 585 chrUn_NT_465156v1 6851 7713 GGXHOI 594 - 6851 7713 0 2 17,519, 0,343, -,-, 617598 Satellite W-chromosome 585 chrUn_NT_465156v1 7730 13732 GGXHOI 540 - 7730 13732 0 10 333,316,300,111,299,194,355,872,110,347, 0,658,1164,1787,2376,3000,3450,4100,5295,5655, -,-,-,-,-,-,-,-,-,-, 617601 Satellite W-chromosome 585 chrUn_NT_465156v1 14057 15849 GGXHOI 453 - 14057 15849 0 3 609,548,572, 0,656,1220, -,-,-, 617613 Satellite W-chromosome 585 chrUn_NT_465156v1 15927 16828 GGXHOI 467 - 15927 16828 0 2 233,647, 0,254, -,-, 617614 Satellite W-chromosome 585 chrUn_NT_465156v1 16898 19873 GGXHOI 526 - 16898 19873 0 4 539,809,195,296, 0,934,2158,2679, -,-,-,-, 617615 Satellite W-chromosome 585 chrUn_NT_465158v1 3670 5633 GGXHOI 379 - 3670 5633 0 2 921,1024, 0,939, -,-, 617623 Satellite W-chromosome 585 chrUn_NT_465158v1 8177 12386 GGXHOI 377 - 8177 12386 0 2 1886,2281, 0,1928, -,-, 617625 Satellite W-chromosome 585 chrUn_NT_465158v1 13012 15128 GGXHOI 373 - 13012 15128 0 2 471,1585, 0,531, -,-, 617627 Satellite W-chromosome 585 chrUn_NT_465158v1 16573 18183 GGXHOI 358 - 16573 18183 0 2 1250,344, 0,1266, -,-, 617629 Satellite W-chromosome 585 chrUn_NT_465160v1 8141 10597 GGLTR7-int 599 + 8141 10597 0 2 338,794, 0,1662, +,+, 617650 LTR ERV1 585 chrUn_NT_465160v1 10776 12993 GGLTR10D-int 919 - 10776 12993 0 2 365,1849, 0,368, -,-, 617653 LTR ERVK 585 chrUn_NT_465160v1 13643 14648 (CGAGG)n 536 + 13643 14648 0 2 358,586, 0,419, +,+, 617657 Simple_repeat Simple_repeat 585 chrUn_NT_465160v1 14851 15559 (CGAGG)n 531 + 14851 15559 0 3 199,42,273, 0,380,435, +,+,+, 617659 Simple_repeat Simple_repeat 585 chrUn_NT_465160v1 15861 16436 (CGAGG)n 556 + 15861 16436 0 2 175,386, 0,189, +,+, 617662 Simple_repeat Simple_repeat 585 chrUn_NT_465160v1 18599 19182 (CGAGG)n 536 + 18599 19182 0 2 306,94, 0,489, +,+, 617670 Simple_repeat Simple_repeat 585 chrUn_NT_465160v1 19394 19765 (CGAGG)n 558 + 19394 19765 0 2 179,177, 0,194, +,+, 617673 Simple_repeat Simple_repeat 585 chrUn_NT_465161v1 11276 19822 GGXHOI 373 - 11276 19822 0 9 869,1110,1292,306,1145,486,478,1719,872, 0,908,2044,3398,3719,4895,5398,5898,7674, -,-,-,-,-,-,-,-,-, 617677 Satellite W-chromosome 585 chrUn_NT_465162v1 7931 10103 GGXHOI 385 + 7931 10103 0 3 472,1080,513, 0,534,1659, +,+,+, 617688 Satellite W-chromosome 585 chrUn_NT_465162v1 18185 19600 GGXHOI 362 + 18185 19600 0 3 468,310,533, 0,531,882, +,+,+, 617700 Satellite W-chromosome 585 chrUn_NT_465163v1 6712 7981 CR1-H 585 + 6712 7981 0 2 1158,111, 0,1158, +,+, 617710 LINE CR1 585 chrUn_NT_465163v1 9733 10360 CR1-H 690 + 9733 10360 0 2 469,139, 0,488, +,+, 617714 LINE CR1 585 chrUn_NT_465164v1 2007 2384 (CGAGG)n 543 + 2007 2384 0 2 179,183, 0,194, +,+, 617735 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 2478 3029 (CGAGG)n 526 + 2478 3029 0 2 179,335, 0,216, +,+, 617737 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 3073 3745 (CGAGG)n 500 + 3073 3745 0 2 473,179, 0,493, +,+, 617739 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 4487 7506 (CGAGG)n 527 + 4487 7506 0 3 563,761,1607, 0,602,1412, +,+,+, 617744 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 8697 9358 (CGAGG)n 581 + 8697 9358 0 2 178,483, 0,178, +,+, 617751 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 9674 10489 (CGAGG)n 512 + 9674 10489 0 2 283,483, 0,332, +,+, 617755 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 15265 15776 (CCTCG)n 592 + 15265 15776 0 2 212,111, 0,400, +,+, 617785 Simple_repeat Simple_repeat 585 chrUn_NT_465164v1 16117 18324 GGLTR10D-int 922 + 16117 18324 0 2 1838,363, 0,1844, +,+, 617791 LTR ERVK 585 chrUn_NT_465165v1 1879 2239 (GCCCCACAGCT)n 532 + 1879 2239 0 2 150,153, 0,207, +,+, 617796 Satellite Satellite 585 chrUn_NT_465165v1 10272 10513 (CTCTATGGGG)n 446 + 10272 10513 0 2 100,121, 0,120, +,+, 617810 Satellite Satellite 585 chrUn_NT_465165v1 11167 11413 (CTCTATGGGG)n 426 + 11167 11413 0 2 123,112, 0,134, +,+, 617814 Satellite Satellite 585 chrUn_NT_465165v1 11471 11753 (CTCTATGGGG)n 426 + 11471 11753 0 2 123,111, 0,171, +,+, 617816 Satellite Satellite 585 chrUn_NT_465165v1 17607 18072 (GCCCCACAGCT)n 269 + 17607 18072 0 3 129,126,133, 0,168,332, +,+,+, 617822 Satellite Satellite 585 chrUn_NT_465165v1 18331 18566 (GCCCCACAGCT)n 352 + 18331 18566 0 2 111,111, 0,124, +,+, 617823 Satellite Satellite 585 chrUn_NT_465165v1 19484 19820 (GCCCCACAGCT)n 348 + 19484 19820 0 2 153,154, 0,182, +,+, 617828 Satellite Satellite 585 chrUn_NT_465166v1 3390 4430 CR1-F0 876 - 3390 4430 0 2 435,605, 0,435, -,-, 617834 LINE CR1 585 chrUn_NT_465166v1 4450 5199 (CCTTG)n 564 + 4450 5199 0 2 179,150, 0,599, +,+, 617835 Simple_repeat Simple_repeat 585 chrUn_NT_465166v1 5060 5479 (GCCTG)n 546 + 5060 5479 0 2 190,229, 0,190, +,+, 617838 Simple_repeat Simple_repeat 585 chrUn_NT_465166v1 6398 6832 GGLTR7A 853 + 6398 6832 0 2 174,259, 0,175, +,+, 617844 LTR ERV1 585 chrUn_NT_465166v1 7359 8433 GGLTR7A 844 + 7359 8433 0 2 463,611, 0,463, +,+, 617846 LTR ERV1 585 chrUn_NT_465166v1 10789 13498 GGERVL-B-int 770 + 10789 13498 0 2 315,2394, 0,315, +,+, 617850 LTR ERVL 585 chrUn_NT_465166v1 14234 15632 GGLTR7-int 331 + 14234 15632 0 3 101,260,280, 0,103,1118, +,+,+, 617852 LTR ERV1 585 chrUn_NT_465168v1 8707 15422 GGXHOI 409 + 8707 15422 0 5 771,1304,341,148,4027, 0,794,2154,2517,2688, +,+,+,+,+, 617888 Satellite W-chromosome 585 chrUn_NT_465168v1 15500 17943 GGXHOI 363 + 15500 17943 0 2 473,1928, 0,515, +,+, 617889 Satellite W-chromosome 585 chrUn_NT_465168v1 18007 18925 GGXHOI 420 + 18007 18925 0 2 265,635, 0,283, +,+, 617890 Satellite W-chromosome 585 chrUn_NT_465168v1 19005 19497 GGXHOI 309 + 19005 19497 0 2 133,313, 0,179, +,+, 617891 Satellite W-chromosome 585 chrUn_NT_465170v1 10097 10763 GGLTR3F1 723 - 10097 10763 0 2 157,507, 0,159, -,-, 617920 LTR ERVL 585 chrUn_NT_465171v1 3893 5958 GGLTR7-int 650 - 3893 5958 0 4 33,74,763,536, 0,34,739,1529, -,-,-,-, 617931 LTR ERV1 585 chrUn_NT_465172v1 8185 8673 CR1-Y4 625 - 8185 8673 0 2 288,195, 0,293, -,-, 617947 LINE CR1 585 chrUn_NT_465173v1 1459 2083 CR1-H 671 - 1459 2083 0 2 139,479, 0,145, -,-, 617959 LINE CR1 585 chrUn_NT_465173v1 5330 6679 CR1-H 639 - 5330 6679 0 2 113,1236, 0,113, -,-, 617965 LINE CR1 585 chrUn_NT_465173v1 17948 18569 CR1-H 673 - 17948 18569 0 2 139,476, 0,145, -,-, 617977 LINE CR1 585 chrUn_NT_465174v1 1402 2767 GGXHOI 371 - 1402 2767 0 2 818,527, 0,838, -,-, 617982 Satellite W-chromosome 585 chrUn_NT_465174v1 3809 5177 GGXHOI 385 - 3809 5177 0 3 524,483,292, 0,578,1076, -,-,-, 617985 Satellite W-chromosome 585 chrUn_NT_465174v1 5344 6685 GGXHOI 375 - 5344 6685 0 2 836,449, 0,892, -,-, 617986 Satellite W-chromosome 585 chrUn_NT_465174v1 8784 9513 GGXHOI 349 - 8784 9513 0 2 341,328, 0,401, -,-, 617991 Satellite W-chromosome 585 chrUn_NT_465174v1 11832 12843 GGXHOI 411 - 11832 12843 0 3 110,361,426, 0,167,585, -,-,-, 617997 Satellite W-chromosome 585 chrUn_NT_465174v1 14053 14821 GGXHOI 373 - 14053 14821 0 2 196,516, 0,252, -,-, 618000 Satellite W-chromosome 585 chrUn_NT_465174v1 14918 15662 GGXHOI 358 - 14918 15662 0 2 356,332, 0,412, -,-, 618001 Satellite W-chromosome 585 chrUn_NT_465174v1 15883 19116 GGXHOI 389 - 15883 19116 0 6 374,432,401,404,1101,358, 0,393,883,1340,1759,2875, -,-,-,-,-,-, 618002 Satellite W-chromosome 585 chrUn_NT_465175v1 12752 13653 (CCTTG)n 472 + 12752 13653 0 3 104,46,50, 0,568,851, +,+,+, 618017 Simple_repeat Simple_repeat 585 chrUn_NT_465175v1 13644 14498 (GCCTG)n 584 + 13644 14498 0 2 257,255, 0,599, +,+, 618022 Simple_repeat Simple_repeat 585 chrUn_NT_465175v1 14265 15224 (CCTTG)n 487 + 14265 15224 0 3 260,69,404, 0,438,555, +,+,+, 618025 Simple_repeat Simple_repeat 585 chrUn_NT_465175v1 15362 16062 (GCCTG)n 558 + 15362 16062 0 3 87,22,234, 0,264,466, +,+,+, 618028 Simple_repeat Simple_repeat 585 chrUn_NT_465177v1 5688 10350 ENS1-LTR 969 - 5688 10350 0 3 920,2825,913, 0,923,3749, -,-,-, 618043 LTR ERVL 585 chrUn_NT_465177v1 11495 19746 Z-REP 670 + 11495 19746 0 2 155,7346, 0,905, +,+, 618045 Satellite macro 585 chrUn_NT_465178v1 6499 11106 CR1-H 558 + 6499 11106 0 2 2357,840, 0,3767, +,+, 618050 LINE CR1 585 chrUn_NT_465178v1 11107 15708 CR1-H 551 + 11107 15708 0 2 2358,834, 0,3767, +,+, 618052 LINE CR1 585 chrUn_NT_465179v1 6267 8985 GGXHOI 416 - 6267 8985 0 2 1624,1052, 0,1666, -,-, 618057 Satellite W-chromosome 585 chrUn_NT_465179v1 9649 19711 GGXHOI 410 - 9649 19711 0 6 503,3062,1777,2787,143,1628, 0,522,3615,5417,8255,8434, -,-,-,-,-,-, 618060 Satellite W-chromosome 585 chrUn_NT_465181v1 3441 5672 GGXHOI 385 - 3441 5672 0 3 444,627,1104, 0,456,1127, -,-,-, 618126 Satellite W-chromosome 585 chrUn_NT_465181v1 6187 10623 GGXHOI 369 - 6187 10623 0 3 153,1891,2359, 0,166,2077, -,-,-, 618128 Satellite W-chromosome 585 chrUn_NT_465181v1 10703 12104 GGXHOI 382 - 10703 12104 0 2 1051,335, 0,1066, -,-, 618129 Satellite W-chromosome 585 chrUn_NT_465181v1 12228 18446 GGXHOI 390 - 12228 18446 0 7 1601,517,1511,976,419,408,653, 0,1613,2145,3671,4659,5098,5565, -,-,-,-,-,-,-, 618130 Satellite W-chromosome 585 chrUn_NT_465181v1 18528 19712 GGXHOI 339 - 18528 19712 0 3 585,130,411, 0,609,773, -,-,-, 618131 Satellite W-chromosome 585 chrUn_NT_465182v1 5093 5849 GGXHOI 350 + 5093 5849 0 2 337,371, 0,385, +,+, 618134 Satellite W-chromosome 585 chrUn_NT_465182v1 5968 19059 GGXHOI 379 + 5968 19059 0 6 1481,3650,1198,2256,3069,1226, 0,1515,5224,6457,8761,11865, +,+,+,+,+,+, 618135 Satellite W-chromosome 585 chrUn_NT_465182v1 19252 19684 GGXHOI 309 + 19252 19684 0 2 122,268, 0,164, +,+, 618136 Satellite W-chromosome 585 chrUn_NT_465183v1 864 1240 CR1-X 487 + 864 1240 0 2 207,169, 0,207, +,+, 618139 LINE CR1 585 chrUn_NT_465183v1 4206 4584 CR1-X 559 + 4206 4584 0 2 206,172, 0,206, +,+, 618144 LINE CR1 585 chrUn_NT_465183v1 7567 7946 CR1-X 560 + 7567 7946 0 2 207,172, 0,207, +,+, 618149 LINE CR1 585 chrUn_NT_465183v1 10932 11311 CR1-X 560 + 10932 11311 0 2 207,172, 0,207, +,+, 618154 LINE CR1 585 chrUn_NT_465183v1 14299 14678 CR1-X 560 + 14299 14678 0 2 207,172, 0,207, +,+, 618159 LINE CR1 585 chrUn_NT_465183v1 17667 18045 CR1-X 565 + 17667 18045 0 2 207,171, 0,207, +,+, 618164 LINE CR1 585 chrUn_NT_465184v1 4322 5417 CR1-B2 646 + 4322 5417 0 2 215,877, 0,218, +,+, 618171 LINE CR1 585 chrUn_NT_465185v1 4223 8933 GGXHOI 379 - 4223 8933 0 2 1144,3533, 0,1177, -,-, 618190 Satellite W-chromosome 585 chrUn_NT_465185v1 8958 12622 GGXHOI 360 - 8958 12622 0 4 356,1782,903,531, 0,372,2170,3133, -,-,-,-, 618193 Satellite W-chromosome 585 chrUn_NT_465185v1 13239 13601 GGXHOI 346 - 13239 13601 0 2 152,194, 0,168, -,-, 618195 Satellite W-chromosome 585 chrUn_NT_465185v1 13670 14281 GGXHOI 360 - 13670 14281 0 2 161,404, 0,207, -,-, 618196 Satellite W-chromosome 585 chrUn_NT_465185v1 15014 19682 GGXHOI 360 - 15014 19682 0 5 128,1784,829,1308,536, 0,150,1955,2800,4132, -,-,-,-,-, 618199 Satellite W-chromosome 585 chrUn_NT_465186v1 13008 14624 GGXHOI 380 + 13008 14624 0 2 471,1083, 0,533, +,+, 618217 Satellite W-chromosome 585 chrUn_NT_465186v1 16753 17737 GGXHOI 339 + 16753 17737 0 2 461,502, 0,482, +,+, 618221 Satellite W-chromosome 585 chrUn_NT_465188v1 2821 3218 ENS1B-LTR 624 + 2821 3218 0 2 207,190, 0,207, +,+, 618243 LTR ERVL 585 chrUn_NT_465188v1 4752 10195 GGERV10_LTR 873 + 4752 10195 0 2 219,5223, 0,220, +,+, 618248 LTR ERVL 585 chrUn_NT_465188v1 17228 18127 CR1-C3 464 - 17228 18127 0 2 508,391, 0,508, -,-, 618260 LINE CR1 585 chrUn_NT_465189v1 3959 4410 CR1-H 633 - 3959 4410 0 2 160,291, 0,160, -,-, 618267 LINE CR1 585 chrUn_NT_465189v1 14142 14763 CR1-H 681 - 14142 14763 0 2 139,476, 0,145, -,-, 618273 LINE CR1 585 chrUn_NT_465189v1 17226 17683 CR1-H 677 - 17226 17683 0 2 163,294, 0,163, -,-, 618277 LINE CR1 585 chrUn_NT_465190v1 7452 9931 GGLTR7-int 598 + 7452 9931 0 2 338,794, 0,1685, +,+, 618283 LTR ERV1 585 chrUn_NT_465190v1 9943 12372 GGERV10_LTR 848 - 9943 12372 0 2 39,41, 0,2388, -,-, 618286 LTR ERVL 585 chrUn_NT_465190v1 10111 12330 GGLTR10D-int 912 - 10111 12330 0 2 365,1851, 0,368, -,-, 618287 LTR ERVK 585 chrUn_NT_465190v1 12372 13557 (CGAGG)n 582 + 12372 13557 0 3 150,295,145, 0,416,1040, +,+,+, 618288 Simple_repeat Simple_repeat 585 chrUn_NT_465190v1 15721 17925 (CGAGG)n 529 + 15721 17925 0 3 185,879,915, 0,235,1289, +,+,+, 618302 Simple_repeat Simple_repeat 585 chrUn_NT_465191v1 1554 2639 GGXHOI 423 - 1554 2639 0 3 148,140,770, 0,164,315, -,-,-, 618312 Satellite W-chromosome 585 chrUn_NT_465191v1 2709 8178 GGXHOI 337 - 2709 8178 0 12 368,188,135,526,141,1040,147,283,139,342,490,1351, 0,423,655,804,1345,1501,2558,2719,3065,3248,3611,4118, -,-,-,-,-,-,-,-,-,-,-,-, 618313 Satellite W-chromosome 585 chrUn_NT_465191v1 8300 10973 GGXHOI 398 - 8300 10973 0 6 129,326,193,137,1548,151, 0,178,521,748,911,2522, -,-,-,-,-,-, 618314 Satellite W-chromosome 585 chrUn_NT_465191v1 11039 12978 GGXHOI 336 - 11039 12978 0 4 270,930,422,259, 0,285,1229,1680, -,-,-,-, 618315 Satellite W-chromosome 585 chrUn_NT_465191v1 13245 14092 GGXHOI 379 - 13245 14092 0 3 252,377,148, 0,272,699, -,-,-, 618316 Satellite W-chromosome 585 chrUn_NT_465191v1 14391 19269 GGXHOI 333 - 14391 19269 0 5 1877,619,153,362,1798, 0,1895,2530,2702,3080, -,-,-,-,-, 618318 Satellite W-chromosome 585 chrUn_NT_465192v1 15252 15877 CR1-H 674 - 15252 15877 0 2 139,480, 0,145, -,-, 618335 LINE CR1 585 chrUn_NT_465192v1 18065 19339 CR1-H 667 - 18065 19339 0 3 114,423,726, 0,114,548, -,-,-, 618339 LINE CR1 585 chrUn_NT_465193v1 5973 10955 CR1-D2 567 - 5973 10955 0 2 572,808, 0,4174, -,-, 618342 LINE CR1 585 chrUn_NT_465193v1 10957 11173 Char12Mar1_GG 525 - 10957 11173 0 2 42,174, 0,42, -,-, 618344 DNA hAT-Charlie 585 chrUn_NT_465193v1 16503 17555 GGERVL-C-int 803 - 16503 17555 0 2 325,727, 0,325, -,-, 618347 LTR ERVL 585 chrUn_NT_465194v1 882 11405 GGXHOI 449 - 882 11405 0 11 1314,558,148,442,1388,1085,320,1996,150,1130,1746, 0,1336,1910,2073,2567,3981,5088,5450,7462,7631,8777, -,-,-,-,-,-,-,-,-,-,-, 618350 Satellite W-chromosome 585 chrUn_NT_465196v1 9962 10625 GGLTR11-int 424 + 9962 10625 0 2 125,315, 0,348, +,+, 618400 LTR ERV1 585 chrUn_NT_465197v1 7462 7776 (TTAGGG)n 846 + 7462 7776 0 2 69,67, 0,247, +,+, 618411 Simple_repeat Simple_repeat 585 chrUn_NT_465197v1 7818 8963 (TTAGGG)n 597 + 7818 8963 0 3 335,392,378, 0,349,767, +,+,+, 618414 Simple_repeat Simple_repeat 585 chrUn_NT_465197v1 8981 10359 (TTAGGG)n 640 + 8981 10359 0 5 444,180,143,30,178, 0,501,820,1147,1200, +,+,+,+,+, 618416 Simple_repeat Simple_repeat 585 chrUn_NT_465197v1 10074 10394 (TTAGGC)n 436 + 10074 10394 0 2 107,35, 0,285, +,+, 618419 Simple_repeat Simple_repeat 585 chrUn_NT_465197v1 10389 11242 (TTAGGG)n 549 + 10389 11242 0 3 382,376,71, 0,394,782, +,+,+, 618420 Simple_repeat Simple_repeat 585 chrUn_NT_465198v1 4019 5063 GGLTR7A 785 - 4019 5063 0 2 585,458, 0,586, -,-, 618425 LTR ERV1 585 chrUn_NT_465198v1 5594 6022 GGLTR7A 871 - 5594 6022 0 2 254,174, 0,254, -,-, 618427 LTR ERV1 585 chrUn_NT_465199v1 1324 1703 (TTCCC)n 864 + 1324 1703 0 2 183,177, 0,202, +,+, 618460 Simple_repeat Simple_repeat 585 chrUn_NT_465201v1 142 1893 GGERVL-A-int 748 - 142 1893 0 2 1293,458, 0,1293, -,-, 618485 LTR ERVL 585 chrUn_NT_465202v1 5571 6441 GGXHOI 337 - 5571 6441 0 2 385,465, 0,405, -,-, 618500 Satellite W-chromosome 585 chrUn_NT_465202v1 6776 7817 GGXHOI 363 - 6776 7817 0 2 780,203, 0,838, -,-, 618501 Satellite W-chromosome 585 chrUn_NT_465202v1 8696 11739 GGXHOI 340 - 8696 11739 0 4 598,1115,257,1016, 0,616,1752,2027, -,-,-,-, 618503 Satellite W-chromosome 585 chrUn_NT_465202v1 11845 15576 GGXHOI 350 - 11845 15576 0 6 775,256,868,77,718,902, 0,788,1065,1954,2050,2829, -,-,-,-,-,-, 618504 Satellite W-chromosome 585 chrUn_NT_465202v1 15950 19157 GGXHOI 360 - 15950 19157 0 3 257,2757,137, 0,300,3070, -,-,-, 618506 Satellite W-chromosome 585 chrUn_NT_465203v1 6316 8158 GGXHOI 372 - 6316 8158 0 2 1066,729, 0,1113, -,-, 618512 Satellite W-chromosome 585 chrUn_NT_465203v1 8253 11498 GGXHOI 379 - 8253 11498 0 4 224,1028,1530,411, 0,237,1287,2834, -,-,-,-, 618513 Satellite W-chromosome 585 chrUn_NT_465203v1 13226 16433 GGXHOI 369 - 13226 16433 0 2 1098,2094, 0,1113, -,-, 618517 Satellite W-chromosome 585 chrUn_NT_465203v1 16506 18106 GGXHOI 396 - 16506 18106 0 2 1208,372, 0,1228, -,-, 618518 Satellite W-chromosome 585 chrUn_NT_465203v1 18297 19591 GGXHOI 355 - 18297 19591 0 2 788,485, 0,809, -,-, 618520 Satellite W-chromosome 585 chrUn_NT_465206v1 9946 11426 GGLTR7B 570 + 9946 11426 0 2 887,125, 0,1355, +,+, 618552 LTR ERV1 585 chrUn_NT_465206v1 13559 15876 CR1-C 849 + 13559 15876 0 3 417,1112,602, 0,603,1715, +,+,+, 618556 LINE CR1 585 chrUn_NT_465207v1 259 494 (CAGGC)n 532 + 259 494 0 2 26,189, 0,46, +,+, 618564 Simple_repeat Simple_repeat 585 chrUn_NT_465207v1 411 741 (CAAGG)n 518 + 411 741 0 2 96,31, 0,299, +,+, 618565 Simple_repeat Simple_repeat 585 chrUn_NT_465207v1 1346 2231 CR1-F0 903 + 1346 2231 0 2 752,133, 0,752, +,+, 618570 LINE CR1 585 chrUn_NT_465207v1 13644 15028 GGLTR7-int 303 - 13644 15028 0 3 278,308,101, 0,973,1283, -,-,-, 618582 LTR ERV1 585 chrUn_NT_465207v1 15761 18590 GGERVL-B-int 712 - 15761 18590 0 2 916,1913, 0,916, -,-, 618584 LTR ERVL 585 chrUn_NT_465209v1 3787 4015 GGXHOI 439 + 3787 4015 0 2 148,65, 0,163, +,+, 618590 Satellite W-chromosome 585 chrUn_NT_465209v1 4155 5326 GGXHOI 380 + 4155 5326 0 2 677,431, 0,740, +,+, 618591 Satellite W-chromosome 585 chrUn_NT_465209v1 5424 5653 GGXHOI 439 + 5424 5653 0 2 148,65, 0,164, +,+, 618592 Satellite W-chromosome 585 chrUn_NT_465209v1 5958 8031 GGXHOI 377 + 5958 8031 0 4 964,432,146,434, 0,1027,1476,1639, +,+,+,+, 618593 Satellite W-chromosome 585 chrUn_NT_465209v1 8130 14377 GGXHOI 373 + 8130 14377 0 8 925,146,1413,431,2075,142,268,682, 0,942,1105,2581,3029,5121,5280,5565, +,+,+,+,+,+,+,+, 618594 Satellite W-chromosome 585 chrUn_NT_465209v1 14511 15241 GGXHOI 381 + 14511 15241 0 2 414,254, 0,476, +,+, 618595 Satellite W-chromosome 585 chrUn_NT_465209v1 15385 15885 GGXHOI 316 + 15385 15885 0 2 256,191, 0,309, +,+, 618596 Satellite W-chromosome 585 chrUn_NT_465209v1 16163 16799 GGXHOI 326 + 16163 16799 0 2 269,305, 0,331, +,+, 618597 Satellite W-chromosome 585 chrUn_NT_465210v1 3237 3855 CR1-H 678 - 3237 3855 0 2 139,474, 0,144, -,-, 618604 LINE CR1 585 chrUn_NT_465210v1 6350 6806 CR1-H 622 - 6350 6806 0 2 160,296, 0,160, -,-, 618608 LINE CR1 585 chrUn_NT_465212v1 4720 8223 GGLTR7-int 401 + 4720 8223 0 4 101,1569,949,280, 0,564,2227,3223, +,+,+,+, 618632 LTR ERV1 585 chrUn_NT_465213v1 3076 12558 Charlie12_GG 568 - 3076 12558 0 2 67,57, 0,9425, -,-, 618645 DNA hAT-Charlie 585 chrUn_NT_465214v1 16456 16649 A-rich 333 + 16456 16649 0 2 37,98, 0,95, +,+, 618708 Low_complexity Low_complexity 585 chrUn_NT_465215v1 2437 3040 GGXHOI 335 + 2437 3040 0 2 465,118, 0,485, +,+, 618721 Satellite W-chromosome 585 chrUn_NT_465215v1 3414 11795 GGXHOI 432 + 3414 11795 0 14 290,554,886,64,428,984,64,426,1055,1050,333,64,1016,929, 0,304,871,1772,1856,2297,3296,3380,3818,4893,5983,6331,6416,7452, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 618722 Satellite W-chromosome 585 chrUn_NT_465215v1 11893 15882 GGXHOI 408 + 11893 15882 0 6 299,105,901,64,1489,999, 0,314,439,1397,1481,2990, +,+,+,+,+,+, 618723 Satellite W-chromosome 585 chrUn_NT_465215v1 16311 18019 GGXHOI 378 + 16311 18019 0 2 1459,197, 0,1511, +,+, 618725 Satellite W-chromosome 585 chrUn_NT_465216v1 141 541 (CAAGG)n 457 + 141 541 0 2 189,188, 0,212, +,+, 618730 Simple_repeat Simple_repeat 585 chrUn_NT_465218v1 1684 4803 GGLTR7-int 419 - 1684 4803 0 4 277,948,1658,116, 0,324,1345,3003, -,-,-,-, 618739 LTR ERV1 585 chrUn_NT_465218v1 13321 16447 GGLTR7-int 419 - 13321 16447 0 4 277,949,1664,116, 0,324,1346,3010, -,-,-,-, 618748 LTR ERV1 585 chrUn_NT_465219v1 10319 12694 GGLTR7-int 401 - 10319 12694 0 4 289,260,101,57, 0,1042,1304,2318, -,-,-,-, 618770 LTR ERV1 585 chrUn_NT_465219v1 12673 16974 GGLTR7A 789 + 12673 16974 0 2 3708,584, 0,3717, +,+, 618773 LTR ERV1 585 chrUn_NT_465220v1 1658 2041 (CGAGG)n 485 + 1658 2041 0 2 189,180, 0,203, +,+, 618782 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 3407 3895 (CGAGG)n 460 + 3407 3895 0 2 122,187, 0,301, +,+, 618788 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 8204 8825 (CGAGG)n 539 + 8204 8825 0 3 179,178,178, 0,239,443, +,+,+, 618803 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 9513 9983 (CGAGG)n 527 + 9513 9983 0 2 278,178, 0,292, +,+, 618805 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 10025 11345 (CGAGG)n 498 + 10025 11345 0 3 134,391,453, 0,456,867, +,+,+, 618807 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 11678 12360 (CGAGG)n 542 + 11678 12360 0 2 179,486, 0,196, +,+, 618811 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 14082 14658 (CGAGG)n 532 + 14082 14658 0 2 363,177, 0,399, +,+, 618819 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 15493 16687 (CGAGG)n 501 + 15493 16687 0 3 356,411,324, 0,419,870, +,+,+, 618824 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 16994 18555 (CGAGG)n 525 + 16994 18555 0 3 1137,188,183, 0,1171,1378, +,+,+, 618827 Simple_repeat Simple_repeat 585 chrUn_NT_465220v1 19004 19398 (CGAGG)n 468 + 19004 19398 0 2 178,191, 0,203, +,+, 618831 Simple_repeat Simple_repeat 585 chrUn_NT_465221v1 1092 2592 Char12Mar1_GG 662 - 1092 2592 0 2 197,471, 0,1029, -,-, 618834 DNA hAT-Charlie 585 chrUn_NT_465221v1 3273 7275 Char12Mar1_GG 691 - 3273 7275 0 3 715,149,208, 0,3231,3794, -,-,-, 618837 DNA hAT-Charlie 585 chrUn_NT_465221v1 7580 10951 GGLTR10D 953 - 7580 10951 0 3 346,2679,346, 0,346,3025, -,-,-, 618840 LTR ERVK 585 chrUn_NT_465221v1 11629 11976 CR1-C4 771 + 11629 11976 0 2 211,53, 0,294, +,+, 618842 LINE CR1 585 chrUn_NT_465223v1 2112 2789 GGXHOI 324 - 2112 2789 0 2 506,114, 0,563, -,-, 618862 Satellite W-chromosome 585 chrUn_NT_465223v1 3407 3968 GGXHOI 328 - 3407 3968 0 2 506,26, 0,535, -,-, 618865 Satellite W-chromosome 585 chrUn_NT_465223v1 6603 7861 GGXHOI 354 - 6603 7861 0 2 426,816, 0,442, -,-, 618874 Satellite W-chromosome 585 chrUn_NT_465223v1 7895 8516 GGXHOI 317 - 7895 8516 0 2 21,579, 0,42, -,-, 618876 Satellite W-chromosome 585 chrUn_NT_465223v1 12251 13176 GGXHOI 373 - 12251 13176 0 2 680,190, 0,735, -,-, 618885 Satellite W-chromosome 585 chrUn_NT_465223v1 13904 15752 GGXHOI 332 - 13904 15752 0 2 558,1273, 0,575, -,-, 618888 Satellite W-chromosome 585 chrUn_NT_465223v1 15818 18770 GGXHOI 350 - 15818 18770 0 3 731,1723,458, 0,752,2494, -,-,-, 618889 Satellite W-chromosome 585 chrUn_NT_465223v1 18796 19409 GGXHOI 412 - 18796 19409 0 2 287,284, 0,329, -,-, 618891 Satellite W-chromosome 585 chrUn_NT_465224v1 18740 18823 (A)n 757 + 18740 18823 0 2 23,30, 0,53, +,+, 618917 Simple_repeat Simple_repeat 585 chrUn_NT_465225v1 1970 2484 Sat-CR1_GG 202 + 1970 2484 0 2 64,257, 0,257, +,+, 618925 Satellite Satellite 585 chrUn_NT_465225v1 2371 2687 GGXHOI 298 . 2371 2687 0 2 143,154, 0,162, +,-, 618927 Satellite W-chromosome 585 chrUn_NT_465225v1 3862 4377 Sat-CR1_GG 178 + 3862 4377 0 2 65,257, 0,258, +,+, 618930 Satellite Satellite 585 chrUn_NT_465225v1 4264 4580 GGXHOI 298 . 4264 4580 0 2 143,154, 0,162, +,-, 618932 Satellite W-chromosome 585 chrUn_NT_465225v1 5755 6271 Sat-CR1_GG 180 + 5755 6271 0 2 65,257, 0,259, +,+, 618935 Satellite Satellite 585 chrUn_NT_465225v1 6158 6474 GGXHOI 298 . 6158 6474 0 2 143,154, 0,162, +,-, 618937 Satellite W-chromosome 585 chrUn_NT_465225v1 7649 8164 Sat-CR1_GG 210 + 7649 8164 0 2 65,257, 0,258, +,+, 618940 Satellite Satellite 585 chrUn_NT_465225v1 8051 8367 GGXHOI 298 . 8051 8367 0 2 143,154, 0,162, +,-, 618942 Satellite W-chromosome 585 chrUn_NT_465225v1 9542 10057 Sat-CR1_GG 180 + 9542 10057 0 2 65,256, 0,259, +,+, 618945 Satellite Satellite 585 chrUn_NT_465225v1 9944 10260 GGXHOI 298 . 9944 10260 0 2 143,154, 0,162, +,-, 618947 Satellite W-chromosome 585 chrUn_NT_465225v1 11435 11950 Sat-CR1_GG 210 + 11435 11950 0 2 65,257, 0,258, +,+, 618950 Satellite Satellite 585 chrUn_NT_465225v1 11837 12153 GGXHOI 298 . 11837 12153 0 2 143,154, 0,162, +,-, 618952 Satellite W-chromosome 585 chrUn_NT_465225v1 13328 13843 Sat-CR1_GG 178 + 13328 13843 0 2 65,257, 0,258, +,+, 618955 Satellite Satellite 585 chrUn_NT_465225v1 13730 14046 GGXHOI 298 . 13730 14046 0 2 143,154, 0,162, +,-, 618957 Satellite W-chromosome 585 chrUn_NT_465225v1 15221 15759 Sat-CR1_GG 180 + 15221 15759 0 2 65,280, 0,258, +,+, 618960 Satellite Satellite 585 chrUn_NT_465225v1 17510 17825 GGXHOI 297 . 17510 17825 0 2 143,153, 0,162, +,-, 618966 Satellite W-chromosome 585 chrUn_NT_465227v1 3994 5257 GGXHOI 340 + 3994 5257 0 2 218,984, 0,279, +,+, 618993 Satellite W-chromosome 585 chrUn_NT_465227v1 5470 7026 GGXHOI 378 + 5470 7026 0 2 986,515, 0,1041, +,+, 618994 Satellite W-chromosome 585 chrUn_NT_465227v1 15327 16344 GGXHOI 383 + 15327 16344 0 2 344,611, 0,406, +,+, 619005 Satellite W-chromosome 585 chrUn_NT_465227v1 18073 19018 GGXHOI 361 + 18073 19018 0 2 388,501, 0,444, +,+, 619008 Satellite W-chromosome 585 chrUn_NT_465229v1 319 674 (CAGGC)n 268 + 319 674 0 2 247,85, 0,270, +,+, 619017 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 674 1137 (CAAGG)n 644 + 674 1137 0 2 46,417, 0,46, +,+, 619018 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 1747 2106 (CAAGG)n 496 + 1747 2106 0 2 184,156, 0,203, +,+, 619021 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 2159 2390 (CAAGG)n 464 + 2159 2390 0 2 24,183, 0,48, +,+, 619023 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 2532 3156 (CCTTG)n 523 + 2532 3156 0 2 227,373, 0,251, +,+, 619025 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 3961 5069 (CAAGG)n 485 + 3961 5069 0 4 372,214,283,25, 0,372,614,1083, +,+,+,+, 619030 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 5123 6155 (CCTTG)n 532 + 5123 6155 0 4 200,305,184,223, 0,236,597,809, +,+,+,+, 619032 Simple_repeat Simple_repeat 585 chrUn_NT_465229v1 6560 7612 GGXHOI 373 - 6560 7612 0 2 517,473, 0,579, -,-, 619034 Satellite W-chromosome 585 chrUn_NT_465229v1 14521 16123 GGXHOI 376 - 14521 16123 0 2 514,1025, 0,577, -,-, 619043 Satellite W-chromosome 585 chrUn_NT_465229v1 16263 17798 GGXHOI 374 - 16263 17798 0 2 1003,470, 0,1065, -,-, 619044 Satellite W-chromosome 585 chrUn_NT_465230v1 2574 5471 GGXHOI 528 - 2574 5471 0 5 833,37,275,166,273, 0,1573,1622,2428,2624, -,-,-,-,-, 619052 Satellite W-chromosome 585 chrUn_NT_465230v1 5514 8722 GGXHOI 564 - 5514 8722 0 3 1114,103,29, 0,2483,3179, -,-,-, 619056 Satellite W-chromosome 585 chrUn_NT_465230v1 8827 11381 GGXHOI 556 - 8827 11381 0 3 484,130,675, 0,801,1879, -,-,-, 619059 Satellite W-chromosome 585 chrUn_NT_465230v1 11430 13139 GGXHOI 564 - 11430 13139 0 2 718,680, 0,1029, -,-, 619063 Satellite W-chromosome 585 chrUn_NT_465230v1 13462 15929 Sat-CR1_GG 156 - 13462 15929 0 2 425,72, 0,2395, -,-, 619066 Satellite Satellite 585 chrUn_NT_465230v1 15895 18803 GGXHOI 556 - 15895 18803 0 3 174,22,550, 0,409,2358, -,-,-, 619068 Satellite W-chromosome 585 chrUn_NT_465231v1 6619 9948 GGXHOI 410 - 6619 9948 0 2 1550,1755, 0,1574, -,-, 619075 Satellite W-chromosome 585 chrUn_NT_465231v1 11650 19406 GGXHOI 406 - 11650 19406 0 4 3343,1361,2261,661, 0,3384,4774,7095, -,-,-,-, 619077 Satellite W-chromosome 585 chrUn_NT_465232v1 200 570 (CAGGC)n 448 + 200 570 0 2 160,21, 0,349, +,+, 619079 Simple_repeat Simple_repeat 585 chrUn_NT_465232v1 6037 6172 G-rich 470 + 6037 6172 0 2 35,52, 0,83, +,+, 619087 Low_complexity Low_complexity 585 chrUn_NT_465232v1 11548 12946 GGLTR7-int 300 - 11548 12946 0 3 280,316,101, 0,979,1297, -,-,-, 619094 LTR ERV1 585 chrUn_NT_465232v1 13680 16395 GGERVL-B-int 717 - 13680 16395 0 4 915,1058,65,316, 0,915,1973,2399, -,-,-,-, 619096 LTR ERVL 585 chrUn_NT_465232v1 18978 19393 (CAGGC)n 467 + 18978 19393 0 2 179,210, 0,205, +,+, 619101 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 953 4930 GGXHOI 387 - 953 4930 0 6 992,733,684,185,1137,70, 0,1017,1773,2520,2734,3907, -,-,-,-,-,-, 619103 Satellite W-chromosome 585 chrUn_NT_465233v1 8693 11019 GGLTR7-int 811 - 8693 11019 0 3 324,480,584, 0,1262,1742, -,-,-, 619109 LTR ERV1 585 chrUn_NT_465233v1 11019 11435 (CAAGG)n 658 + 11019 11435 0 2 213,203, 0,213, +,+, 619111 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 11516 11968 (CAAGG)n 602 + 11516 11968 0 2 179,260, 0,192, +,+, 619113 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 13108 13596 (GCCTG)n 630 + 13108 13596 0 2 220,90, 0,398, +,+, 619120 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 13781 14392 (GCCTG)n 532 + 13781 14392 0 2 183,428, 0,183, +,+, 619123 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 14431 14842 GGLTR7A 658 - 14431 14842 0 2 334,77, 0,334, -,-, 619124 LTR ERV1 585 chrUn_NT_465233v1 14969 16852 (CCCTAA)n 527 + 14969 16852 0 5 176,678,379,358,217, 0,229,918,1308,1666, +,+,+,+,+, 619126 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 16912 17548 (CCCTAA)n 585 + 16912 17548 0 3 201,143,64, 0,250,572, +,+,+, 619128 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 17614 18575 (CCCTAA)n 566 + 17614 18575 0 4 197,299,94,180, 0,197,673,781, +,+,+,+, 619130 Simple_repeat Simple_repeat 585 chrUn_NT_465233v1 18647 19359 (CCCTAA)n 626 + 18647 19359 0 2 503,185, 0,527, +,+, 619133 Simple_repeat Simple_repeat 585 chrUn_NT_465234v1 16490 18612 GGXHOI 399 - 16490 18612 0 2 1941,156, 0,1966, -,-, 619144 Satellite W-chromosome 585 chrUn_NT_465236v1 2696 3320 CR1-H 378 + 2696 3320 0 2 209,379, 0,245, +,+, 619163 LINE CR1 585 chrUn_NT_465236v1 5201 5825 CR1-H 378 + 5201 5825 0 2 209,379, 0,245, +,+, 619166 LINE CR1 585 chrUn_NT_465236v1 7705 8329 CR1-H 378 + 7705 8329 0 2 209,379, 0,245, +,+, 619169 LINE CR1 585 chrUn_NT_465236v1 10209 10831 CR1-H 391 + 10209 10831 0 2 208,378, 0,244, +,+, 619172 LINE CR1 585 chrUn_NT_465236v1 14763 15381 CR1-H 378 + 14763 15381 0 2 209,374, 0,244, +,+, 619177 LINE CR1 585 chrUn_NT_465237v1 12235 19398 GGXHOI 383 - 12235 19398 0 6 1342,680,3168,766,146,922, 0,1364,2066,5254,6033,6241, -,-,-,-,-,-, 619184 Satellite W-chromosome 585 chrUn_NT_465238v1 3807 12886 GGXHOI 367 - 3807 12886 0 5 1939,1103,2603,2915,429, 0,1956,3100,5719,8650, -,-,-,-,-, 619188 Satellite W-chromosome 585 chrUn_NT_465238v1 13024 14324 GGXHOI 362 - 13024 14324 0 2 217,1047, 0,253, -,-, 619189 Satellite W-chromosome 585 chrUn_NT_465238v1 14689 19391 GGXHOI 369 - 14689 19391 0 4 3032,146,1239,236, 0,3048,3209,4466, -,-,-,-, 619191 Satellite W-chromosome 585 chrUn_NT_465239v1 1570 2621 GGXHOI 392 + 1570 2621 0 2 472,516, 0,535, +,+, 619194 Satellite W-chromosome 585 chrUn_NT_465239v1 3250 4061 (CAAGG)n 523 + 3250 4061 0 3 214,305,200, 0,270,611, +,+,+, 619198 Simple_repeat Simple_repeat 585 chrUn_NT_465239v1 4232 5223 (CCTTG)n 491 + 4232 5223 0 2 377,586, 0,405, +,+, 619200 Simple_repeat Simple_repeat 585 chrUn_NT_465239v1 5791 6593 (CAAGG)n 506 + 5791 6593 0 3 192,374,176, 0,235,626, +,+,+, 619203 Simple_repeat Simple_repeat 585 chrUn_NT_465239v1 15437 15835 (CAAGG)n 457 + 15437 15835 0 2 205,193, 0,205, +,+, 619220 Simple_repeat Simple_repeat 585 chrUn_NT_465239v1 15929 16476 (CAAGG)n 417 + 15929 16476 0 2 308,205, 0,342, +,+, 619222 Simple_repeat Simple_repeat 585 chrUn_NT_465239v1 16530 17025 (CCTTG)n 458 + 16530 17025 0 2 89,230, 0,265, +,+, 619223 Simple_repeat Simple_repeat 585 chrUn_NT_465239v1 18578 19037 (CAAGG)n 503 + 18578 19037 0 2 179,256, 0,203, +,+, 619231 Simple_repeat Simple_repeat 585 chrUn_NT_465240v1 10694 13809 GGXHOI 388 + 10694 13809 0 3 1940,583,554, 0,1961,2561, +,+,+, 619242 Satellite W-chromosome 585 chrUn_NT_465240v1 15875 18431 GGXHOI 381 + 15875 18431 0 2 1123,1416, 0,1140, +,+, 619245 Satellite W-chromosome 585 chrUn_NT_465240v1 18687 19352 GGXHOI 344 + 18687 19352 0 2 381,242, 0,423, +,+, 619246 Satellite W-chromosome 585 chrUn_NT_465241v1 7788 8515 CR1-H 684 + 7788 8515 0 2 554,155, 0,572, +,+, 619250 LINE CR1 585 chrUn_NT_465242v1 7246 7702 CR1-H 672 + 7246 7702 0 2 296,160, 0,296, +,+, 619274 LINE CR1 585 chrUn_NT_465242v1 9818 10445 CR1-H 686 + 9818 10445 0 2 469,139, 0,488, +,+, 619277 LINE CR1 585 chrUn_NT_465243v1 3291 3537 CR1-X 521 - 3291 3537 0 2 75,171, 0,75, -,-, 619292 LINE CR1 585 chrUn_NT_465243v1 9069 10194 CR1-B2 710 + 9069 10194 0 2 225,897, 0,228, +,+, 619295 LINE CR1 585 chrUn_NT_465244v1 2915 6558 GGXHOI 347 - 2915 6558 0 9 392,744,199,300,844,138,143,402,212, 0,422,1183,1424,1740,2600,2799,2993,3431, -,-,-,-,-,-,-,-,-, 619305 Satellite W-chromosome 585 chrUn_NT_465244v1 7555 10063 GGXHOI 352 - 7555 10063 0 4 457,385,1039,558, 0,472,894,1950, -,-,-,-, 619309 Satellite W-chromosome 585 chrUn_NT_465244v1 11540 14767 GGXHOI 337 - 11540 14767 0 7 112,459,500,689,640,468,161, 0,126,601,1157,1893,2587,3066, -,-,-,-,-,-,-, 619312 Satellite W-chromosome 585 chrUn_NT_465244v1 14848 17129 GGXHOI 374 - 14848 17129 0 8 274,398,385,136,205,399,135,135, 0,289,724,1147,1327,1547,1957,2146, -,-,-,-,-,-,-,-, 619313 Satellite W-chromosome 585 chrUn_NT_465244v1 17699 19366 GGXHOI 353 - 17699 19366 0 6 138,300,420,122,406,134, 0,156,493,934,1078,1533, -,-,-,-,-,-, 619315 Satellite W-chromosome 585 chrUn_NT_465245v1 3132 5020 GGXHOI 327 - 3132 5020 0 3 836,620,402, 0,852,1486, -,-,-, 619318 Satellite W-chromosome 585 chrUn_NT_465245v1 5191 8112 GGXHOI 399 - 5191 8112 0 4 1359,183,994,290, 0,1375,1581,2631, -,-,-,-, 619319 Satellite W-chromosome 585 chrUn_NT_465245v1 8321 9997 GGXHOI 380 - 8321 9997 0 3 134,1370,141, 0,150,1535, -,-,-, 619320 Satellite W-chromosome 585 chrUn_NT_465245v1 10586 12465 GGXHOI 343 - 10586 12465 0 3 459,187,1147, 0,521,732, -,-,-, 619322 Satellite W-chromosome 585 chrUn_NT_465245v1 12818 14323 GGXHOI 335 - 12818 14323 0 4 459,134,545,296, 0,492,643,1209, -,-,-,-, 619323 Satellite W-chromosome 585 chrUn_NT_465245v1 15033 18329 GGXHOI 412 - 15033 18329 0 4 935,184,1094,986, 0,951,1159,2310, -,-,-,-, 619325 Satellite W-chromosome 585 chrUn_NT_465246v1 5236 6616 GGXHOI 527 - 5236 6616 0 3 245,138,942, 0,258,438, -,-,-, 619332 Satellite W-chromosome 585 chrUn_NT_465246v1 6682 9958 GGXHOI 548 - 6682 9958 0 2 2729,360, 0,2916, -,-, 619333 Satellite W-chromosome 585 chrUn_NT_465246v1 10024 11091 GGXHOI 596 - 10024 11091 0 2 727,89, 0,978, -,-, 619335 Satellite W-chromosome 585 chrUn_NT_465247v1 1041 1975 (CTCTATGGGG)n 529 + 1041 1975 0 5 107,136,188,269,128, 0,133,302,503,806, +,+,+,+,+, 619351 Satellite Satellite 585 chrUn_NT_465247v1 2917 3444 (CTCTATGGGG)n 502 + 2917 3444 0 4 44,90,124,120, 0,111,235,407, +,+,+,+, 619358 Satellite Satellite 585 chrUn_NT_465247v1 3479 3769 (CTCTATGGGG)n 610 - 3479 3769 0 2 98,71, 0,219, -,-, 619360 Satellite Satellite 585 chrUn_NT_465247v1 3979 4603 (CTCTATGGGG)n 495 + 3979 4603 0 4 265,116,95,34, 0,286,436,590, +,+,+,+, 619364 Satellite Satellite 585 chrUn_NT_465247v1 4814 5250 (CTCTATGGGG)n 504 + 4814 5250 0 3 115,115,119, 0,163,317, +,+,+, 619367 Satellite Satellite 585 chrUn_NT_465247v1 7804 8149 (CTCTATGGGG)n 590 + 7804 8149 0 2 204,117, 0,228, +,+, 619375 Satellite Satellite 585 chrUn_NT_465247v1 9230 10067 (CTCTATGGGG)n 572 + 9230 10067 0 4 130,119,367,132, 0,172,326,705, +,+,+,+, 619383 Satellite Satellite 585 chrUn_NT_465247v1 10111 10425 (CTCTATGGGG)n 653 - 10111 10425 0 2 141,163, 0,151, -,-, 619384 Satellite Satellite 585 chrUn_NT_465247v1 10463 10726 (CTCTATGGGG)n 636 + 10463 10726 0 2 105,124, 0,139, +,+, 619385 Satellite Satellite 585 chrUn_NT_465247v1 10687 11260 (CTCTATGGGG)n 611 . 10687 11260 0 3 176,114,146, 0,189,427, -,+,+, 619386 Satellite Satellite 585 chrUn_NT_465247v1 11272 11550 (CTCTATGGGG)n 541 + 11272 11550 0 2 130,127, 0,151, +,+, 619389 Satellite Satellite 585 chrUn_NT_465247v1 11992 12362 (CTCTATGGGG)n 636 - 11992 12362 0 2 125,95, 0,275, -,-, 619393 Satellite Satellite 585 chrUn_NT_465247v1 12446 12861 (CTCTATGGGG)n 611 + 12446 12861 0 2 122,262, 0,153, +,+, 619396 Satellite Satellite 585 chrUn_NT_465247v1 12901 13409 (CTCTATGGGG)n 702 + 12901 13409 0 3 176,116,113, 0,217,395, +,+,+, 619398 Satellite Satellite 585 chrUn_NT_465247v1 13449 13789 (CTCTATGGGG)n 551 - 13449 13789 0 2 173,167, 0,173, -,-, 619399 Satellite Satellite 585 chrUn_NT_465247v1 13829 15171 (CTCTATGGGG)n 606 + 13829 15171 0 8 117,125,124,129,118,127,123,133, 0,169,345,481,650,830,1074,1209, +,+,+,+,+,+,+,+, 619401 Satellite Satellite 585 chrUn_NT_465247v1 15410 15830 (CTCTATGGGG)n 638 + 15410 15830 0 3 121,122,122, 0,142,298, +,+,+, 619404 Satellite Satellite 585 chrUn_NT_465247v1 16302 16715 (CTCTATGGGG)n 554 + 16302 16715 0 2 265,127, 0,286, +,+, 619408 Satellite Satellite 585 chrUn_NT_465247v1 17987 18251 (CTCTATGGGG)n 498 + 17987 18251 0 2 80,63, 0,201, +,+, 619416 Satellite Satellite 585 chrUn_NT_465248v1 2727 3466 GGXHOI 389 - 2727 3466 0 2 484,230, 0,509, -,-, 619425 Satellite W-chromosome 585 chrUn_NT_465248v1 3740 4383 GGXHOI 382 - 3740 4383 0 2 451,147, 0,496, -,-, 619426 Satellite W-chromosome 585 chrUn_NT_465248v1 7186 8487 GGXHOI 404 - 7186 8487 0 2 1045,234, 0,1067, -,-, 619429 Satellite W-chromosome 585 chrUn_NT_465248v1 9272 15061 GGXHOI 395 - 9272 15061 0 5 2420,1286,504,815,638, 0,2442,3760,4295,5151, -,-,-,-,-, 619431 Satellite W-chromosome 585 chrUn_NT_465248v1 15139 19326 GGXHOI 381 - 15139 19326 0 4 1859,448,1133,658, 0,1884,2381,3529, -,-,-,-, 619432 Satellite W-chromosome 585 chrUn_NT_465249v1 2521 10609 GGXHOI 444 - 2521 10609 0 7 376,880,1047,392,2178,2555,569, 0,390,1287,2348,2752,4947,7519, -,-,-,-,-,-,-, 619434 Satellite W-chromosome 585 chrUn_NT_465249v1 10707 17112 GGXHOI 438 - 10707 17112 0 12 1585,158,193,1181,273,163,148,198,253,807,985,148, 0,1604,1774,1987,3214,3504,3692,3889,4149,4416,5244,6257, -,-,-,-,-,-,-,-,-,-,-,-, 619435 Satellite W-chromosome 585 chrUn_NT_465249v1 17226 19330 GGXHOI 440 - 17226 19330 0 3 102,1655,298, 0,136,1806, -,-,-, 619436 Satellite W-chromosome 585 chrUn_NT_465251v1 1787 2430 (CGAGG)n 580 + 1787 2430 0 2 232,411, 0,232, +,+, 619457 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 2527 3232 (CGAGG)n 556 + 2527 3232 0 2 220,277, 0,428, +,+, 619459 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 3505 4335 (CGAGG)n 586 + 3505 4335 0 4 140,25,186,249, 0,331,372,581, +,+,+,+, 619464 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 4386 5586 (CGAGG)n 566 + 4386 5586 0 5 97,86,182,345,226, 0,282,383,601,974, +,+,+,+,+, 619467 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 6662 7346 (CGAGG)n 588 + 6662 7346 0 3 212,127,191, 0,226,493, +,+,+, 619473 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 7417 8181 (CGAGG)n 584 + 7417 8181 0 3 184,191,389, 0,184,375, +,+,+, 619476 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 8262 9527 (CGAGG)n 600 + 8262 9527 0 5 186,279,183,49,247, 0,186,465,911,1018, +,+,+,+,+, 619479 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 9567 10808 (CGAGG)n 588 + 9567 10808 0 5 180,163,40,135,303, 0,180,534,613,938, +,+,+,+,+, 619483 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 10894 11379 (CGAGG)n 598 + 10894 11379 0 2 195,111, 0,374, +,+, 619487 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 11833 12207 (CGAGG)n 632 + 11833 12207 0 2 119,68, 0,306, +,+, 619492 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 13895 14897 (CGAGG)n 543 + 13895 14897 0 4 193,207,121,298, 0,193,400,704, +,+,+,+, 619502 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 14984 16369 (CGAGG)n 585 + 14984 16369 0 3 783,183,54, 0,799,1331, +,+,+, 619505 Simple_repeat Simple_repeat 585 chrUn_NT_465251v1 16944 18502 (CGAGG)n 550 + 16944 18502 0 4 289,560,411,27, 0,332,944,1531, +,+,+,+, 619512 Simple_repeat Simple_repeat 585 chrUn_NT_465252v1 2041 5605 GGXHOI 423 - 2041 5605 0 4 1103,550,148,1717, 0,1116,1685,1847, -,-,-,-, 619519 Satellite W-chromosome 585 chrUn_NT_465252v1 5676 7782 GGXHOI 415 - 5676 7782 0 3 1598,146,338, 0,1611,1768, -,-,-, 619520 Satellite W-chromosome 585 chrUn_NT_465252v1 7867 12415 GGXHOI 402 - 7867 12415 0 8 336,236,696,490,146,1068,1059,332, 0,397,666,1399,1902,2059,3142,4216, -,-,-,-,-,-,-,-, 619521 Satellite W-chromosome 585 chrUn_NT_465252v1 12498 13491 GGXHOI 393 - 12498 13491 0 2 644,334, 0,659, -,-, 619522 Satellite W-chromosome 585 chrUn_NT_465252v1 13575 15163 GGXHOI 379 - 13575 15163 0 2 786,781, 0,807, -,-, 619523 Satellite W-chromosome 585 chrUn_NT_465252v1 15267 16250 GGXHOI 392 - 15267 16250 0 2 635,333, 0,650, -,-, 619524 Satellite W-chromosome 585 chrUn_NT_465252v1 16335 17331 GGXHOI 392 - 16335 17331 0 2 647,334, 0,662, -,-, 619525 Satellite W-chromosome 585 chrUn_NT_465252v1 17416 19311 GGXHOI 427 - 17416 19311 0 4 527,147,735,446, 0,541,703,1449, -,-,-,-, 619526 Satellite W-chromosome 585 chrUn_NT_465255v1 3032 4663 CR1-E 607 - 3032 4663 0 2 60,45, 0,1586, -,-, 619567 LINE CR1 585 chrUn_NT_465255v1 5482 5574 CR1-E 687 - 5482 5574 0 2 48,44, 0,48, -,-, 619581 LINE CR1 585 chrUn_NT_465255v1 9962 10583 (TTAGGG)n 593 + 9962 10583 0 3 182,180,193, 0,207,428, +,+,+, 619591 Simple_repeat Simple_repeat 585 chrUn_NT_465255v1 11386 12505 (TTAGGG)n 720 + 11386 12505 0 2 825,270, 0,849, +,+, 619593 Simple_repeat Simple_repeat 585 chrUn_NT_465256v1 15402 15499 (ACCCAGC)n 398 + 15402 15499 0 2 7,6, 0,91, +,+, 619621 Simple_repeat Simple_repeat 585 chrUn_NT_465257v1 5633 5967 GGERV10_LTR 577 - 5633 5967 0 2 156,85, 0,249, -,-, 619628 LTR ERVL 585 chrUn_NT_465257v1 6049 8152 CR1-D 621 + 6049 8152 0 2 839,987, 0,1116, +,+, 619630 LINE CR1 585 chrUn_NT_465257v1 11117 11790 GGLTR7-int 789 - 11117 11790 0 3 161,260,213, 0,178,460, -,-,-, 619632 LTR ERV1 585 chrUn_NT_465257v1 12028 16212 GGERV28_I-int 211 - 12028 16212 0 3 1994,1440,64, 0,2310,4120, -,-,-, 619633 LTR ERVK 585 chrUn_NT_465258v1 533 4986 GGERVL-B-int 821 - 533 4986 0 3 1613,1769,713, 0,1613,3740, -,-,-, 619636 LTR ERVL 585 chrUn_NT_465258v1 7320 10109 ENS1-int 897 - 7320 10109 0 2 1815,974, 0,1815, -,-, 619639 LTR ERVL 585 chrUn_NT_465258v1 10936 14666 GGERVL-A-int 809 + 10936 14666 0 3 524,772,1960, 0,524,1770, +,+,+, 619641 LTR ERVL 585 chrUn_NT_465258v1 15266 18248 GGLTR3A 853 + 15266 18248 0 2 2459,523, 0,2459, +,+, 619644 LTR ERVL 585 chrUn_NT_465259v1 832 4655 GGXHOI 390 - 832 4655 0 2 3336,466, 0,3357, -,-, 619649 Satellite W-chromosome 585 chrUn_NT_465259v1 9325 10375 GGXHOI 407 - 9325 10375 0 2 604,399, 0,651, -,-, 619658 Satellite W-chromosome 585 chrUn_NT_465259v1 13084 14327 GGXHOI 386 - 13084 14327 0 2 730,492, 0,751, -,-, 619664 Satellite W-chromosome 585 chrUn_NT_465259v1 14361 14960 GGXHOI 410 - 14361 14960 0 2 190,373, 0,226, -,-, 619666 Satellite W-chromosome 585 chrUn_NT_465260v1 4479 5604 CR1-B2 687 + 4479 5604 0 2 225,897, 0,228, +,+, 619675 LINE CR1 585 chrUn_NT_465260v1 7510 10030 GGLTR7-int 326 + 7510 10030 0 3 98,345,328, 0,1749,2192, +,+,+, 619677 LTR ERV1 585 chrUn_NT_465261v1 3713 5989 GGXHOI 351 - 3713 5989 0 3 377,993,868, 0,398,1408, -,-,-, 619686 Satellite W-chromosome 585 chrUn_NT_465261v1 6242 10873 GGXHOI 404 - 6242 10873 0 8 163,356,1175,1172,387,337,518,355, 0,224,597,1790,2978,3383,3741,4276, -,-,-,-,-,-,-,-, 619687 Satellite W-chromosome 585 chrUn_NT_465261v1 11083 13895 GGXHOI 366 - 11083 13895 0 3 1874,263,638, 0,1895,2174, -,-,-, 619688 Satellite W-chromosome 585 chrUn_NT_465261v1 14039 14917 GGXHOI 346 - 14039 14917 0 2 449,410, 0,468, -,-, 619689 Satellite W-chromosome 585 chrUn_NT_465261v1 15239 16376 GGXHOI 361 - 15239 16376 0 3 509,366,199, 0,526,938, -,-,-, 619690 Satellite W-chromosome 585 chrUn_NT_465261v1 16764 17668 GGXHOI 364 - 16764 17668 0 2 228,643, 0,261, -,-, 619692 Satellite W-chromosome 585 chrUn_NT_465261v1 17770 19266 GGXHOI 383 - 17770 19266 0 4 451,336,361,286, 0,462,815,1210, -,-,-,-, 619693 Satellite W-chromosome 585 chrUn_NT_465262v1 10613 11230 GGERV28_I-int 374 + 10613 11230 0 2 88,86, 0,531, +,+, 619702 LTR ERVK 585 chrUn_NT_465264v1 1139 1894 (CAAGG)n 602 + 1139 1894 0 3 175,199,307, 0,186,448, +,+,+, 619776 Simple_repeat Simple_repeat 585 chrUn_NT_465264v1 4044 4603 (CAAGG)n 636 + 4044 4603 0 2 184,358, 0,201, +,+, 619786 Simple_repeat Simple_repeat 585 chrUn_NT_465264v1 4397 5125 (CAGGC)n 498 + 4397 5125 0 2 231,147, 0,581, +,+, 619787 Simple_repeat Simple_repeat 585 chrUn_NT_465264v1 4999 5432 (CAAGG)n 587 + 4999 5432 0 2 177,244, 0,189, +,+, 619789 Simple_repeat Simple_repeat 585 chrUn_NT_465264v1 7960 9001 GGXHOI 400 + 7960 9001 0 2 266,754, 0,287, +,+, 619794 Satellite W-chromosome 585 chrUn_NT_465264v1 11246 12497 GGXHOI 356 + 11246 12497 0 3 237,837,108, 0,258,1143, +,+,+, 619799 Satellite W-chromosome 585 chrUn_NT_465264v1 12556 15814 GGXHOI 367 + 12556 15814 0 3 349,1935,936, 0,366,2322, +,+,+, 619801 Satellite W-chromosome 585 chrUn_NT_465264v1 15899 17687 GGXHOI 363 + 15899 17687 0 2 687,1041, 0,747, +,+, 619802 Satellite W-chromosome 585 chrUn_NT_465265v1 2139 2563 GGXHOI 378 - 2139 2563 0 2 248,158, 0,266, -,-, 619808 Satellite W-chromosome 585 chrUn_NT_465265v1 3724 6331 GGXHOI 332 - 3724 6331 0 10 408,454,151,136,181,133,222,146,193,281, 0,451,955,1150,1298,1492,1676,1914,2083,2326, -,-,-,-,-,-,-,-,-,-, 619812 Satellite W-chromosome 585 chrUn_NT_465265v1 6421 7022 GGXHOI 447 - 6421 7022 0 2 169,414, 0,187, -,-, 619813 Satellite W-chromosome 585 chrUn_NT_465265v1 7114 8646 GGXHOI 372 - 7114 8646 0 5 100,445,261,240,357, 0,119,610,914,1175, -,-,-,-,-, 619814 Satellite W-chromosome 585 chrUn_NT_465265v1 8730 9030 GGXHOI 403 - 8730 9030 0 2 132,129, 0,171, -,-, 619815 Satellite W-chromosome 585 chrUn_NT_465265v1 9332 9657 GGXHOI 367 - 9332 9657 0 2 132,143, 0,182, -,-, 619817 Satellite W-chromosome 585 chrUn_NT_465265v1 10167 14363 GGXHOI 341 - 10167 14363 0 11 598,125,181,136,340,329,488,1040,408,139,140, 0,620,756,980,1153,1535,1881,2389,3480,3904,4056, -,-,-,-,-,-,-,-,-,-,-, 619819 Satellite W-chromosome 585 chrUn_NT_465265v1 14696 15477 GGXHOI 409 - 14696 15477 0 2 267,457, 0,324, -,-, 619820 Satellite W-chromosome 585 chrUn_NT_465265v1 15852 17129 GGXHOI 346 - 15852 17129 0 2 446,816, 0,461, -,-, 619822 Satellite W-chromosome 585 chrUn_NT_465265v1 17799 19268 GGXHOI 398 - 17799 19268 0 5 244,301,137,216,481, 0,256,571,756,988, -,-,-,-,-, 619824 Satellite W-chromosome 585 chrUn_NT_465267v1 5434 7548 GGXHOI 387 + 5434 7548 0 2 1044,1007, 0,1107, +,+, 619848 Satellite W-chromosome 585 chrUn_NT_465267v1 10022 11647 GGXHOI 392 + 10022 11647 0 2 1046,516, 0,1109, +,+, 619852 Satellite W-chromosome 585 chrUn_NT_465267v1 11746 12797 GGXHOI 392 + 11746 12797 0 2 472,516, 0,535, +,+, 619853 Satellite W-chromosome 585 chrUn_NT_465267v1 14044 15095 GGXHOI 392 + 14044 15095 0 2 472,516, 0,535, +,+, 619856 Satellite W-chromosome 585 chrUn_NT_465267v1 16342 17389 GGXHOI 390 + 16342 17389 0 2 471,513, 0,534, +,+, 619859 Satellite W-chromosome 585 chrUn_NT_465268v1 882 1035 (CCCAAT)n 676 + 882 1035 0 2 101,32, 0,121, +,+, 619865 Simple_repeat Simple_repeat 585 chrUn_NT_465268v1 6540 7938 GGLTR7-int 324 - 6540 7938 0 3 280,260,101, 0,1035,1297, -,-,-, 619872 LTR ERV1 585 chrUn_NT_465268v1 14262 14982 (CAGGC)n 508 + 14262 14982 0 2 96,336, 0,384, +,+, 619880 Simple_repeat Simple_repeat 585 chrUn_NT_465268v1 16146 16577 (CAAGG)n 647 + 16146 16577 0 2 198,228, 0,203, +,+, 619891 Simple_repeat Simple_repeat 585 chrUn_NT_465268v1 16549 16812 (CAGGC)n 542 + 16549 16812 0 2 59,26, 0,237, +,+, 619892 Simple_repeat Simple_repeat 585 chrUn_NT_465268v1 16608 17077 (CAAGG)n 545 + 16608 17077 0 2 178,291, 0,178, +,+, 619893 Simple_repeat Simple_repeat 585 chrUn_NT_465270v1 10915 18159 GGXHOI 381 - 10915 18159 0 3 2748,3863,585, 0,2771,6659, -,-,-, 619918 Satellite W-chromosome 585 chrUn_NT_465270v1 18254 19247 GGXHOI 321 - 18254 19247 0 3 612,138,194, 0,640,799, -,-,-, 619919 Satellite W-chromosome 585 chrUn_NT_465271v1 4781 15980 Charlie12_GG 501 - 4781 15980 0 2 98,67, 0,11132, -,-, 619924 DNA hAT-Charlie 585 chrUn_NT_465272v1 3813 7441 GGLTR11-int 263 - 3813 7441 0 4 1410,233,372,253, 0,2315,2754,3375, -,-,-,-, 619947 LTR ERV1 585 chrUn_NT_465272v1 13497 17251 GGERV28_I-int 154 + 13497 17251 0 3 786,376,1994, 0,1069,1760, +,+,+, 619952 LTR ERVK 585 chrUn_NT_465272v1 17490 18334 GGLTR7-int 797 + 17490 18334 0 3 213,261,348, 0,235,496, +,+,+, 619953 LTR ERV1 585 chrUn_NT_465273v1 10660 11578 GGXHOI 317 + 10660 11578 0 2 289,610, 0,308, +,+, 619959 Satellite W-chromosome 585 chrUn_NT_465274v1 2279 2625 GGXHOI 412 - 2279 2625 0 2 136,188, 0,158, -,-, 619969 Satellite W-chromosome 585 chrUn_NT_465274v1 3470 15665 GGXHOI 395 - 3470 15665 0 11 279,1077,1106,1104,1137,1136,1107,1133,1093,1077,1513, 0,335,1468,2630,3790,4953,6115,7278,8437,9586,10682, -,-,-,-,-,-,-,-,-,-,-, 619971 Satellite W-chromosome 585 chrUn_NT_465274v1 15778 16562 GGXHOI 418 - 15778 16562 0 2 134,628, 0,156, -,-, 619972 Satellite W-chromosome 585 chrUn_NT_465274v1 16940 18397 GGXHOI 374 - 16940 18397 0 2 629,816, 0,641, -,-, 619973 Satellite W-chromosome 585 chrUn_NT_465275v1 3024 9094 GGXHOI 544 + 3024 9094 0 11 172,247,191,254,27,123,300,1172,162,293,193, 0,497,1190,1693,2391,2473,2880,3565,4748,5190,5877, +,+,+,+,+,+,+,+,+,+,+, 619980 Satellite W-chromosome 585 chrUn_NT_465275v1 9502 19001 GGXHOI 530 + 9502 19001 0 17 158,194,247,194,247,194,247,194,256,192,297,192,296,192,255,216,180, 0,602,1118,1812,2330,3024,3540,4234,4739,5441,5953,6647,7162,7853,8364,9046,9319, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 619990 Satellite W-chromosome 585 chrUn_NT_465276v1 1309 1891 (TTAGGG)n 518 + 1309 1891 0 2 192,357, 0,225, +,+, 620009 Simple_repeat Simple_repeat 585 chrUn_NT_465276v1 2217 3713 (TTAGGG)n 569 + 2217 3713 0 6 173,189,238,35,369,188, 0,207,396,814,892,1308, +,+,+,+,+,+, 620013 Simple_repeat Simple_repeat 585 chrUn_NT_465276v1 3768 5691 (TTAGGG)n 597 + 3768 5691 0 5 177,543,155,766,176, 0,201,755,928,1747, +,+,+,+,+, 620016 Simple_repeat Simple_repeat 585 chrUn_NT_465276v1 5817 6228 GGLTR7A 658 + 5817 6228 0 2 77,334, 0,77, +,+, 620018 LTR ERV1 585 chrUn_NT_465276v1 7082 7830 (CAGGC)n 628 + 7082 7830 0 2 493,239, 0,509, +,+, 620022 Simple_repeat Simple_repeat 585 chrUn_NT_465276v1 7862 8505 GGXHOI 319 + 7862 8505 0 2 313,305, 0,338, +,+, 620023 Satellite W-chromosome 585 chrUn_NT_465276v1 8700 9810 (CCTTG)n 630 + 8700 9810 0 5 144,111,181,225,185, 0,333,460,673,925, +,+,+,+,+, 620026 Simple_repeat Simple_repeat 585 chrUn_NT_465276v1 9837 12233 GGLTR7-int 849 + 9837 12233 0 3 584,482,341, 0,584,2055, +,+,+, 620028 LTR ERV1 585 chrUn_NT_465276v1 13934 15826 GGXHOI 375 + 13934 15826 0 4 184,719,233,653, 0,247,995,1239, +,+,+,+, 620033 Satellite W-chromosome 585 chrUn_NT_465276v1 15967 16679 GGXHOI 387 + 15967 16679 0 2 263,389, 0,323, +,+, 620034 Satellite W-chromosome 585 chrUn_NT_465276v1 17923 19227 GGXHOI 371 + 17923 19227 0 2 895,380, 0,924, +,+, 620037 Satellite W-chromosome 585 chrUn_NT_465279v1 2743 5300 GGERVL-B-int 756 + 2743 5300 0 4 309,53,1085,750, 0,668,722,1807, +,+,+,+, 620075 LTR ERVL 585 chrUn_NT_465279v1 5302 6646 GGLTR7-int 406 + 5302 6646 0 3 60,230,280, 0,62,1064, +,+,+, 620076 LTR ERV1 585 chrUn_NT_465281v1 230 658 (CAAGG)n 594 + 230 658 0 2 134,110, 0,318, +,+, 620099 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 700 2138 (CAAGG)n 608 + 700 2138 0 4 233,305,76,448, 0,233,714,990, +,+,+,+, 620102 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 1688 2180 (CTAGG)n 390 + 1688 2180 0 2 249,54, 0,438, +,+, 620105 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 2127 3301 (CAAGG)n 630 + 2127 3301 0 4 400,152,74,223, 0,400,854,951, +,+,+,+, 620107 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 3361 4065 (CAAGG)n 534 + 3361 4065 0 3 174,14,67, 0,360,637, +,+,+, 620111 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 4209 5622 (CAAGG)n 581 + 4209 5622 0 5 103,17,21,383,370, 0,370,599,660,1043, +,+,+,+,+, 620116 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 5645 6478 (CAAGG)n 562 + 5645 6478 0 4 173,31,146,109, 0,354,385,724, +,+,+,+, 620122 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 6787 8832 (CAAGG)n 560 + 6787 8832 0 5 369,586,20,91,368, 0,404,1349,1560,1677, +,+,+,+,+, 620128 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 8156 8576 (CAGGC)n 425 + 8156 8576 0 2 191,229, 0,191, +,+, 620130 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 8805 9160 (CAGGC)n 461 + 8805 9160 0 2 162,193, 0,162, +,+, 620132 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 9121 9799 (CAAGG)n 588 + 9121 9799 0 3 234,51,193, 0,434,485, +,+,+, 620133 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 9851 10224 (CAAGG)n 597 + 9851 10224 0 2 179,182, 0,191, +,+, 620136 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 10273 11958 (CAAGG)n 560 + 10273 11958 0 4 228,256,120,29, 0,672,939,1656, +,+,+,+, 620138 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 11332 11929 (CAGGC)n 456 + 11332 11929 0 2 183,414, 0,183, +,+, 620141 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 12533 17495 (CAAGG)n 540 + 12533 17495 0 14 444,260,76,32,70,752,204,224,183,98,116,674,376,246, 0,454,729,1091,1305,1406,2158,2374,2774,2957,3522,3666,4340,4716, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 620145 Simple_repeat Simple_repeat 585 chrUn_NT_465281v1 17552 18787 (CAAGG)n 527 + 17552 18787 0 6 189,196,199,159,108,188, 0,189,385,584,926,1047, +,+,+,+,+,+, 620151 Simple_repeat Simple_repeat 585 chrUn_NT_465282v1 3354 9785 Charlie12_GGa 397 - 3354 9785 0 2 92,98, 0,6333, -,-, 620161 DNA hAT-Charlie 585 chrUn_NT_465283v1 126 755 CR1-F 537 + 126 755 0 3 180,156,204, 0,224,425, +,+,+, 620186 LINE CR1 585 chrUn_NT_465283v1 797 3612 CR1-F 538 + 797 3612 0 9 201,187,200,203,201,204,154,191,208, 0,245,472,962,1209,1453,1927,2369,2607, +,+,+,+,+,+,+,+,+, 620187 LINE CR1 585 chrUn_NT_465283v1 3654 7879 CR1-F 519 + 3654 7879 0 13 204,202,204,154,201,191,194,201,206,204,155,198,211, 0,246,490,960,1400,1646,1877,2367,2610,2858,3327,3771,4014, +,+,+,+,+,+,+,+,+,+,+,+,+, 620191 LINE CR1 585 chrUn_NT_465283v1 7922 9767 CR1-F 503 + 7922 9767 0 6 203,199,201,154,197,208, 0,245,486,951,1395,1637, +,+,+,+,+,+, 620197 LINE CR1 585 chrUn_NT_465283v1 9810 11632 CR1-F 508 + 9810 11632 0 5 195,204,154,194,194, 0,479,950,1393,1628, +,+,+,+,+, 620200 LINE CR1 585 chrUn_NT_465283v1 11674 15895 CR1-F 519 + 11674 15895 0 13 202,202,200,153,199,190,190,204,203,204,155,194,211, 0,244,488,950,1393,1637,1869,2359,2604,2849,3320,3768,4010, +,+,+,+,+,+,+,+,+,+,+,+,+, 620204 LINE CR1 585 chrUn_NT_465283v1 15938 19195 CR1-F 523 + 15938 19195 0 10 202,204,203,153,194,198,197,201,201,162, 0,244,490,958,1401,1875,2369,2608,2852,3095, +,+,+,+,+,+,+,+,+,+, 620210 LINE CR1 585 chrUn_NT_465284v1 2569 3240 (CGAGG)n 525 + 2569 3240 0 2 183,438, 0,233, +,+, 620226 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 3535 6308 (CGAGG)n 523 + 3535 6308 0 6 326,188,183,626,266,443, 0,384,621,856,1926,2330, +,+,+,+,+,+, 620228 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 7490 8160 (CGAGG)n 526 + 7490 8160 0 2 183,437, 0,233, +,+, 620238 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 9078 11230 (CGAGG)n 534 + 9078 11230 0 5 183,842,178,218,436, 0,236,1133,1360,1716, +,+,+,+,+, 620241 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 11411 12119 (CGAGG)n 544 + 11411 12119 0 2 180,473, 0,235, +,+, 620244 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 13848 14534 (CGAGG)n 533 + 13848 14534 0 2 183,458, 0,228, +,+, 620254 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 15435 17091 (CGAGG)n 521 + 15435 17091 0 5 511,360,216,271,241, 0,525,885,1128,1415, +,+,+,+,+, 620258 Simple_repeat Simple_repeat 585 chrUn_NT_465284v1 17760 18432 (CGAGG)n 518 + 17760 18432 0 2 180,472, 0,200, +,+, 620260 Simple_repeat Simple_repeat 585 chrUn_NT_465285v1 12195 12573 (CAAGG)n 521 + 12195 12573 0 2 169,194, 0,184, +,+, 620266 Simple_repeat Simple_repeat 585 chrUn_NT_465285v1 13609 13963 (CAAGG)n 574 + 13609 13963 0 2 160,12, 0,342, +,+, 620270 Simple_repeat Simple_repeat 585 chrUn_NT_465285v1 15064 15567 (CAAGG)n 624 + 15064 15567 0 2 63,439, 0,64, +,+, 620276 Simple_repeat Simple_repeat 585 chrUn_NT_465285v1 15838 16883 (CAAGG)n 556 + 15838 16883 0 3 145,103,206, 0,363,839, +,+,+, 620278 Simple_repeat Simple_repeat 585 chrUn_NT_465285v1 16733 17563 (CAGGC)n 481 + 16733 17563 0 3 253,168,165, 0,253,665, +,+,+, 620281 Simple_repeat Simple_repeat 585 chrUn_NT_465285v1 17415 18397 (CAAGG)n 629 + 17415 18397 0 3 219,172,216, 0,594,766, +,+,+, 620283 Simple_repeat Simple_repeat 585 chrUn_NT_465286v1 3988 4610 CR1-H 678 + 3988 4610 0 2 477,139, 0,483, +,+, 620293 LINE CR1 585 chrUn_NT_465287v1 495 3264 GGERVL-B-int 708 - 495 3264 0 3 2043,53,305, 0,2044,2464, -,-,-, 620307 LTR ERVL 585 chrUn_NT_465287v1 5765 6816 GGLTR7A 767 - 5765 6816 0 2 589,461, 0,590, -,-, 620311 LTR ERV1 585 chrUn_NT_465287v1 7344 7769 GGLTR7A 868 - 7344 7769 0 2 251,174, 0,251, -,-, 620313 LTR ERV1 585 chrUn_NT_465287v1 8336 8841 (CAGGC)n 527 + 8336 8841 0 2 270,180, 0,325, +,+, 620316 Simple_repeat Simple_repeat 585 chrUn_NT_465288v1 1540 3161 GGXHOI 391 + 1540 3161 0 2 1044,516, 0,1105, +,+, 620339 Satellite W-chromosome 585 chrUn_NT_465288v1 6131 8204 GGXHOI 385 + 6131 8204 0 2 1049,963, 0,1110, +,+, 620344 Satellite W-chromosome 585 chrUn_NT_465288v1 17472 19121 GGXHOI 371 + 17472 19121 0 2 1075,512, 0,1137, +,+, 620357 Satellite W-chromosome 585 chrUn_NT_465289v1 4961 5090 (GTTCTTTCC)n 948 + 4961 5090 0 2 39,39, 0,90, +,+, 620366 Simple_repeat Simple_repeat 585 chrUn_NT_465289v1 16855 16984 (GTTCTTTCC)n 921 + 16855 16984 0 2 39,39, 0,90, +,+, 620388 Simple_repeat Simple_repeat 585 chrUn_NT_465290v1 3393 6078 GGXHOI 548 - 3393 6078 0 4 132,137,134,1360, 0,381,964,1325, -,-,-,-, 620396 Satellite W-chromosome 585 chrUn_NT_465290v1 6093 8615 GGXHOI 560 - 6093 8615 0 3 133,461,588, 0,949,1934, -,-,-, 620401 Satellite W-chromosome 585 chrUn_NT_465290v1 8660 12190 GGXHOI 565 - 8660 12190 0 5 718,330,31,272,675, 0,1460,2146,2219,2855, -,-,-,-,-, 620405 Satellite W-chromosome 585 chrUn_NT_465290v1 12228 13118 GGXHOI 522 - 12228 13118 0 2 469,147, 0,743, -,-, 620410 Satellite W-chromosome 585 chrUn_NT_465290v1 13142 14050 GGXHOI 554 - 13142 14050 0 2 241,266, 0,642, -,-, 620413 Satellite W-chromosome 585 chrUn_NT_465290v1 15239 16814 GGXHOI 544 - 15239 16814 0 2 90,742, 0,833, -,-, 620418 Satellite W-chromosome 585 chrUn_NT_465290v1 16831 19148 GGXHOI 558 - 16831 19148 0 5 160,48,24,22,807, 0,206,511,840,1510, -,-,-,-,-, 620421 Satellite W-chromosome 585 chrUn_NT_465291v1 827 5032 GGXHOI 564 - 827 5032 0 4 1491,911,351,570, 0,1962,2915,3635, -,-,-,-, 620426 Satellite W-chromosome 585 chrUn_NT_465291v1 5179 6456 GGXHOI 484 - 5179 6456 0 2 599,477, 0,800, -,-, 620429 Satellite W-chromosome 585 chrUn_NT_465291v1 6699 9449 GGXHOI 403 - 6699 9449 0 3 572,1589,234, 0,901,2516, -,-,-, 620431 Satellite W-chromosome 585 chrUn_NT_465291v1 9548 14076 GGXHOI 543 - 9548 14076 0 2 1377,3101, 0,1427, -,-, 620433 Satellite W-chromosome 585 chrUn_NT_465291v1 15958 16328 GGXHOI 370 - 15958 16328 0 2 243,111, 0,259, -,-, 620436 Satellite W-chromosome 585 chrUn_NT_465291v1 16480 19128 GGXHOI 470 - 16480 19128 0 2 451,1843, 0,805, -,-, 620437 Satellite W-chromosome 585 chrUn_NT_465292v1 7581 11184 GGLTR7-int 408 - 7581 11184 0 4 277,955,1653,104, 0,329,1381,3499, -,-,-,-, 620445 LTR ERV1 585 chrUn_NT_465293v1 2112 5276 GGXHOI 374 - 2112 5276 0 2 1954,1191, 0,1973, -,-, 620459 Satellite W-chromosome 585 chrUn_NT_465293v1 6018 7293 GGXHOI 324 - 6018 7293 0 2 745,508, 0,767, -,-, 620462 Satellite W-chromosome 585 chrUn_NT_465293v1 7328 8477 GGXHOI 331 - 7328 8477 0 2 712,416, 0,733, -,-, 620464 Satellite W-chromosome 585 chrUn_NT_465293v1 8532 9209 GGXHOI 386 - 8532 9209 0 2 270,386, 0,291, -,-, 620466 Satellite W-chromosome 585 chrUn_NT_465293v1 10467 11290 GGXHOI 405 - 10467 11290 0 2 305,497, 0,326, -,-, 620471 Satellite W-chromosome 585 chrUn_NT_465293v1 14044 15501 GGXHOI 344 - 14044 15501 0 2 733,703, 0,754, -,-, 620479 Satellite W-chromosome 585 chrUn_NT_465293v1 15905 16825 GGXHOI 357 - 15905 16825 0 2 405,494, 0,426, -,-, 620480 Satellite W-chromosome 585 chrUn_NT_465293v1 16858 19129 GGXHOI 401 - 16858 19129 0 3 1666,194,350, 0,1696,1921, -,-,-, 620482 Satellite W-chromosome 585 chrUn_NT_465294v1 1360 2205 GGXHOI 401 - 1360 2205 0 3 261,203,324, 0,303,521, -,-,-, 620485 Satellite W-chromosome 585 chrUn_NT_465294v1 2271 4439 GGXHOI 391 - 2271 4439 0 6 698,366,485,62,219,193, 0,709,1119,1615,1728,1975, -,-,-,-,-,-, 620486 Satellite W-chromosome 585 chrUn_NT_465294v1 5216 6587 GGXHOI 362 - 5216 6587 0 5 153,130,473,371,138, 0,195,347,848,1233, -,-,-,-,-, 620489 Satellite W-chromosome 585 chrUn_NT_465294v1 6677 7071 GGXHOI 414 - 6677 7071 0 2 122,257, 0,137, -,-, 620490 Satellite W-chromosome 585 chrUn_NT_465294v1 7959 8659 GGXHOI 287 - 7959 8659 0 3 236,202,184, 0,271,516, -,-,-, 620492 Satellite W-chromosome 585 chrUn_NT_465294v1 9208 10031 GGXHOI 421 - 9208 10031 0 3 345,284,139, 0,384,684, -,-,-, 620495 Satellite W-chromosome 585 chrUn_NT_465294v1 10375 11943 GGXHOI 380 - 10375 11943 0 6 128,687,275,120,98,114, 0,142,873,1166,1324,1454, -,-,-,-,-,-, 620497 Satellite W-chromosome 585 chrUn_NT_465294v1 12503 13196 GGXHOI 431 - 12503 13196 0 2 357,313, 0,380, -,-, 620499 Satellite W-chromosome 585 chrUn_NT_465294v1 13369 19136 GGXHOI 441 - 13369 19136 0 8 865,685,973,397,189,481,1566,453, 0,882,1584,2574,2988,3193,3692,5314, -,-,-,-,-,-,-,-, 620500 Satellite W-chromosome 585 chrUn_NT_465295v1 339 532 CR1-H 562 - 339 532 0 2 109,70, 0,123, -,-, 620502 LINE CR1 585 chrUn_NT_465296v1 12982 14384 GGXHOI 368 - 12982 14384 0 2 869,470, 0,932, -,-, 620532 Satellite W-chromosome 585 chrUn_NT_465296v1 17905 18831 GGXHOI 383 - 17905 18831 0 2 515,348, 0,578, -,-, 620538 Satellite W-chromosome 585 chrUn_NT_465298v1 1302 2000 GGXHOI 424 - 1302 2000 0 2 182,501, 0,197, -,-, 620556 Satellite W-chromosome 585 chrUn_NT_465298v1 2185 4424 GGXHOI 394 - 2185 4424 0 4 641,671,476,355, 0,657,1349,1884, -,-,-,-, 620557 Satellite W-chromosome 585 chrUn_NT_465298v1 4648 10214 GGXHOI 379 - 4648 10214 0 9 971,1241,681,287,260,355,905,311,391, 0,989,2246,2949,3275,3553,3924,4852,5175, -,-,-,-,-,-,-,-,-, 620558 Satellite W-chromosome 585 chrUn_NT_465298v1 10711 12599 GGXHOI 371 - 10711 12599 0 3 448,876,523, 0,471,1365, -,-,-, 620560 Satellite W-chromosome 585 chrUn_NT_465298v1 16793 17775 GGXHOI 386 - 16793 17775 0 2 781,188, 0,794, -,-, 620566 Satellite W-chromosome 585 chrUn_NT_465298v1 17840 19100 GGXHOI 377 - 17840 19100 0 3 445,309,472, 0,468,788, -,-,-, 620567 Satellite W-chromosome 585 chrUn_NT_465299v1 3257 3309 (GGCCGGC)n 386 + 3257 3309 0 2 7,16, 0,36, +,+, 620570 Simple_repeat Simple_repeat 585 chrUn_NT_465299v1 4102 4729 CR1-H 604 - 4102 4729 0 2 138,472, 0,155, -,-, 620572 LINE CR1 585 chrUn_NT_465299v1 7230 8539 CR1-H 563 - 7230 8539 0 2 109,1200, 0,109, -,-, 620576 LINE CR1 585 chrUn_NT_465300v1 230 2028 CR1-F 611 + 230 2028 0 6 181,189,156,203,204,180, 0,227,679,1127,1372,1618, +,+,+,+,+,+, 620586 LINE CR1 585 chrUn_NT_465300v1 2072 5496 CR1-F 595 + 2072 5496 0 11 177,191,198,203,203,204,155,198,177,168,186, 0,222,455,951,1196,1441,1912,2358,2815,3025,3238, +,+,+,+,+,+,+,+,+,+,+, 620589 LINE CR1 585 chrUn_NT_465300v1 5537 8043 CR1-F 505 + 5537 8043 0 9 199,203,204,204,145,203,171,193,166, 0,497,742,988,1456,1652,1897,2106,2340, +,+,+,+,+,+,+,+,+, 620594 LINE CR1 585 chrUn_NT_465300v1 8098 8499 CR1-F 696 + 8098 8499 0 2 170,186, 0,215, +,+, 620597 LINE CR1 585 chrUn_NT_465300v1 8541 9097 CR1-F 484 + 8541 9097 0 2 189,189, 0,367, +,+, 620598 LINE CR1 585 chrUn_NT_465300v1 9138 10543 CR1-F 437 + 9138 10543 0 5 200,203,144,180,85, 0,242,707,896,1320, +,+,+,+,+, 620599 LINE CR1 585 chrUn_NT_465300v1 10817 15041 CR1-F 534 + 10817 15041 0 13 189,197,202,202,204,164,191,199,199,202,203,153,201, 0,231,728,972,1216,1462,1898,2131,2628,2869,3113,3583,4023, +,+,+,+,+,+,+,+,+,+,+,+,+, 620602 LINE CR1 585 chrUn_NT_465300v1 15081 19009 CR1-F 535 + 15081 19009 0 12 184,150,200,206,203,155,192,200,203,204,202,182, 0,445,639,880,1128,1596,2039,2510,3011,3256,3502,3746, +,+,+,+,+,+,+,+,+,+,+,+, 620608 LINE CR1 585 chrUn_NT_465301v1 4692 5243 A-rich 440 + 4692 5243 0 2 472,38, 0,513, +,+, 620629 Low_complexity Low_complexity 585 chrUn_NT_465301v1 10999 12496 GGLTR7B 584 + 10999 12496 0 2 891,114, 0,1383, +,+, 620637 LTR ERV1 585 chrUn_NT_465302v1 8893 9460 CR1-X 445 - 8893 9460 0 3 221,132,172, 0,263,395, -,-,-, 620656 LINE CR1 585 chrUn_NT_465302v1 13335 14459 CR1-B2 701 - 13335 14459 0 2 896,225, 0,899, -,-, 620661 LINE CR1 585 chrUn_NT_465303v1 5044 5606 CR1-X 452 + 5044 5606 0 3 171,132,217, 0,171,345, +,+,+, 620666 LINE CR1 585 chrUn_NT_465303v1 14415 15537 CR1-B2 700 - 14415 15537 0 2 896,223, 0,899, -,-, 620674 LINE CR1 585 chrUn_NT_465304v1 847 2701 GGXHOI 427 - 847 2701 0 3 480,731,604, 0,497,1250, -,-,-, 620678 Satellite W-chromosome 585 chrUn_NT_465304v1 3363 5350 GGXHOI 403 - 3363 5350 0 2 481,1443, 0,544, -,-, 620681 Satellite W-chromosome 585 chrUn_NT_465304v1 5884 7742 GGXHOI 429 - 5884 7742 0 3 481,733,605, 0,498,1253, -,-,-, 620684 Satellite W-chromosome 585 chrUn_NT_465304v1 8407 10340 GGXHOI 409 - 8407 10340 0 2 481,1389, 0,544, -,-, 620687 Satellite W-chromosome 585 chrUn_NT_465304v1 10923 11597 GGXHOI 345 - 10923 11597 0 2 414,218, 0,456, -,-, 620690 Satellite W-chromosome 585 chrUn_NT_465304v1 11641 12346 (CGAGG)n 608 + 11641 12346 0 2 181,498, 0,207, +,+, 620692 Simple_repeat Simple_repeat 585 chrUn_NT_465304v1 13587 16028 (CGAGG)n 603 + 13587 16028 0 6 282,754,182,207,58,398, 0,469,1236,1418,1805,2043, +,+,+,+,+,+, 620698 Simple_repeat Simple_repeat 585 chrUn_NT_465304v1 16151 17109 (CGAGG)n 539 + 16151 17109 0 3 215,122,220, 0,595,738, +,+,+, 620702 Simple_repeat Simple_repeat 585 chrUn_NT_465304v1 17473 19085 (CGAGG)n 644 + 17473 19085 0 5 261,75,174,73,178, 0,443,835,1347,1434, +,+,+,+,+, 620707 Simple_repeat Simple_repeat 585 chrUn_NT_465305v1 7281 8129 Z-REP 519 + 7281 8129 0 2 441,322, 0,526, +,+, 620721 Satellite macro 585 chrUn_NT_465305v1 12939 14860 GGLTR7-int 656 - 12939 14860 0 4 33,74,655,527, 0,34,739,1394, -,-,-,-, 620725 LTR ERV1 585 chrUn_NT_465306v1 6587 7055 CR1-X2 377 - 6587 7055 0 2 161,236, 0,232, -,-, 620730 LINE CR1 585 chrUn_NT_465306v1 12081 12987 GGERVL-A-int 165 + 12081 12987 0 2 393,242, 0,664, +,+, 620737 LTR ERVL 585 chrUn_NT_465307v1 900 1525 CR1-H 689 + 900 1525 0 2 467,139, 0,486, +,+, 620745 LINE CR1 585 chrUn_NT_465307v1 12413 13043 CR1-C 704 - 12413 13043 0 2 65,565, 0,65, -,-, 620758 LINE CR1 585 chrUn_NT_465307v1 16046 17314 CR1-H 584 + 16046 17314 0 2 1157,111, 0,1157, +,+, 620762 LINE CR1 585 chrUn_NT_465308v1 1668 4841 GGXHOI 588 - 1668 4841 0 7 162,354,278,148,76,207,315, 0,195,1443,1732,2548,2640,2858, -,-,-,-,-,-,-, 620770 Satellite W-chromosome 585 chrUn_NT_465308v1 4673 5363 Sat-CR1_GG 180 - 4673 5363 0 2 181,12, 0,678, -,-, 620773 Satellite Satellite 585 chrUn_NT_465308v1 5706 12156 GGXHOI 549 - 5706 12156 0 12 107,438,150,265,230,493,272,145,274,146,70,464, 0,170,620,1326,1636,2491,3681,3964,4797,5082,5900,5986, -,-,-,-,-,-,-,-,-,-,-,-, 620777 Satellite W-chromosome 585 chrUn_NT_465308v1 12042 12699 Sat-CR1_GG 154 - 12042 12699 0 2 154,295, 0,362, -,-, 620783 Satellite Satellite 585 chrUn_NT_465308v1 13414 17943 GGXHOI 575 - 13414 17943 0 6 774,240,148,458,45,751, 0,1454,1742,2563,3691,3778, -,-,-,-,-,-, 620787 Satellite W-chromosome 585 chrUn_NT_465308v1 18024 18660 GGXHOI 515 - 18024 18660 0 2 246,348, 0,288, -,-, 620792 Satellite W-chromosome 585 chrUn_NT_465309v1 5663 9525 GGXHOI 552 - 5663 9525 0 4 364,207,217,183, 0,1117,2969,3679, -,-,-,-, 620800 Satellite W-chromosome 585 chrUn_NT_465309v1 9706 11377 Sat-CR1_GG 162 - 9706 11377 0 2 715,115, 0,1556, -,-, 620806 Satellite Satellite 585 chrUn_NT_465309v1 11306 12968 GGXHOI 562 - 11306 12968 0 2 176,706, 0,956, -,-, 620808 Satellite W-chromosome 585 chrUn_NT_465309v1 12580 15336 Sat-CR1_GG 176 - 12580 15336 0 2 431,699, 0,2057, -,-, 620810 Satellite Satellite 585 chrUn_NT_465309v1 14677 19084 GGXHOI 555 - 14677 19084 0 5 794,110,157,335,110, 0,1468,1618,3004,4297, -,-,-,-,-, 620812 Satellite W-chromosome 585 chrUn_NT_465310v1 5640 6740 GGERVL-A-int 88 - 5640 6740 0 2 436,393, 0,707, -,-, 620819 LTR ERVL 585 chrUn_NT_465310v1 12056 12866 CR1-C4 425 + 12056 12866 0 2 33,223, 0,587, +,+, 620827 LINE CR1 585 chrUn_NT_465312v1 54 1973 GGXHOI 592 - 54 1973 0 2 949,299, 0,1620, -,-, 620839 Satellite W-chromosome 585 chrUn_NT_465312v1 1984 11552 GGXHOI 559 - 1984 11552 0 13 1117,148,299,147,299,147,309,422,406,573,249,575,458, 0,1128,1950,2260,3082,3392,3858,4181,4644,5605,6850,7862,9110, -,-,-,-,-,-,-,-,-,-,-,-,-, 620842 Satellite W-chromosome 585 chrUn_NT_465312v1 12276 18106 GGXHOI 589 - 12276 18106 0 9 245,146,409,147,299,147,458,574,238, 0,256,958,1378,2198,2508,3328,4342,5592, -,-,-,-,-,-,-,-,-, 620851 Satellite W-chromosome 585 chrUn_NT_465313v1 11556 12952 GGLTR7-int 324 - 11556 12952 0 3 280,236,100, 0,1034,1296, -,-,-, 620872 LTR ERV1 585 chrUn_NT_465315v1 7197 7422 (GCCCCACAGCT)n 421 + 7197 7422 0 2 98,85, 0,140, +,+, 620907 Satellite Satellite 585 chrUn_NT_465316v1 4321 6358 GGXHOI 350 + 4321 6358 0 3 388,475,1055, 0,444,982, +,+,+, 620923 Satellite W-chromosome 585 chrUn_NT_465316v1 8659 11148 GGXHOI 393 + 8659 11148 0 2 1955,516, 0,1973, +,+, 620928 Satellite W-chromosome 585 chrUn_NT_465316v1 12803 13614 (CAAGG)n 523 + 12803 13614 0 3 214,305,200, 0,270,611, +,+,+, 620932 Simple_repeat Simple_repeat 585 chrUn_NT_465316v1 13782 14766 (CCTTG)n 500 + 13782 14766 0 2 370,586, 0,398, +,+, 620934 Simple_repeat Simple_repeat 585 chrUn_NT_465316v1 15334 16195 (CAAGG)n 484 + 15334 16195 0 3 193,373,227, 0,237,634, +,+,+, 620937 Simple_repeat Simple_repeat 585 chrUn_NT_465316v1 16308 16568 (CCTTG)n 498 + 16308 16568 0 2 178,24, 0,236, +,+, 620939 Simple_repeat Simple_repeat 585 chrUn_NT_465316v1 16621 16980 (CCTTG)n 496 + 16621 16980 0 2 156,184, 0,175, +,+, 620941 Simple_repeat Simple_repeat 585 chrUn_NT_465316v1 17083 17447 (CCTTG)n 428 + 17083 17447 0 2 262,75, 0,289, +,+, 620943 Simple_repeat Simple_repeat 585 chrUn_NT_465316v1 17701 18014 (GCCTG)n 368 + 17701 18014 0 2 90,41, 0,272, +,+, 620945 Simple_repeat Simple_repeat 585 chrUn_NT_465319v1 2528 4950 GGLTR7-int 591 + 2528 4950 0 2 336,777, 0,1645, +,+, 620993 LTR ERV1 585 chrUn_NT_465319v1 5126 7327 GGLTR10D-int 924 - 5126 7327 0 2 364,1834, 0,367, -,-, 620996 LTR ERVK 585 chrUn_NT_465319v1 7375 8221 (CGAGG)n 609 + 7375 8221 0 3 401,233,212, 0,401,634, +,+,+, 620998 Simple_repeat Simple_repeat 585 chrUn_NT_465319v1 8880 9295 (CGAGG)n 599 + 8880 9295 0 2 188,184, 0,231, +,+, 621002 Simple_repeat Simple_repeat 585 chrUn_NT_465319v1 9347 11092 (CGAGG)n 566 + 9347 11092 0 4 171,149,540,69, 0,608,901,1676, +,+,+,+, 621004 Simple_repeat Simple_repeat 585 chrUn_NT_465319v1 11203 11605 (CGAGG)n 582 + 11203 11605 0 2 137,56, 0,346, +,+, 621009 Simple_repeat Simple_repeat 585 chrUn_NT_465319v1 11869 13869 (CCTCG)n 528 + 11869 13869 0 3 288,1136,510, 0,305,1490, +,+,+, 621013 Simple_repeat Simple_repeat 585 chrUn_NT_465319v1 13910 14488 (CCTCG)n 512 + 13910 14488 0 2 277,122, 0,456, +,+, 621015 Simple_repeat Simple_repeat 585 chrUn_NT_465320v1 14504 15167 GGLTR11-int 476 - 14504 15167 0 3 228,87,125, 0,274,538, -,-,-, 621044 LTR ERV1 585 chrUn_NT_465322v1 1524 2985 GGXHOI 540 - 1524 2985 0 2 164,1124, 0,337, -,-, 621054 Satellite W-chromosome 585 chrUn_NT_465322v1 4605 6114 GGXHOI 476 - 4605 6114 0 2 525,973, 0,536, -,-, 621057 Satellite W-chromosome 585 chrUn_NT_465322v1 12453 13929 GGXHOI 485 - 12453 13929 0 3 118,904,211, 0,130,1265, -,-,-, 621062 Satellite W-chromosome 585 chrUn_NT_465322v1 14295 15409 GGXHOI 480 - 14295 15409 0 2 678,211, 0,903, -,-, 621065 Satellite W-chromosome 585 chrUn_NT_465324v1 9342 11448 CR1-B2 592 - 9342 11448 0 2 133,194, 0,1912, -,-, 621108 LINE CR1 585 chrUn_NT_465328v1 12497 13891 CR1-X 488 + 12497 13891 0 4 119,170,78,50, 0,1086,1256,1344, +,+,+,+, 621205 LINE CR1 585 chrUn_NT_465330v1 14664 15513 (CCCTAA)n 547 + 14664 15513 0 2 457,380, 0,469, +,+, 621227 Simple_repeat Simple_repeat 585 chrUn_NT_465330v1 15789 17430 (CCCTAA)n 631 + 15789 17430 0 5 184,172,228,452,363, 0,199,400,647,1278, +,+,+,+,+, 621231 Simple_repeat Simple_repeat 585 chrUn_NT_465330v1 17641 18000 (CCCTAA)n 574 + 17641 18000 0 2 113,60, 0,299, +,+, 621233 Simple_repeat Simple_repeat 585 chrUn_NT_465331v1 1799 2415 CR1-H 376 + 1799 2415 0 2 207,374, 0,242, +,+, 621240 LINE CR1 585 chrUn_NT_465331v1 3914 6642 CR1-H 360 + 3914 6642 0 3 211,204,377, 0,2111,2351, +,+,+, 621243 LINE CR1 585 chrUn_NT_465331v1 8507 9128 CR1-H 374 + 8507 9128 0 2 209,376, 0,245, +,+, 621248 LINE CR1 585 chrUn_NT_465331v1 11002 11625 CR1-H 374 + 11002 11625 0 2 209,378, 0,245, +,+, 621251 LINE CR1 585 chrUn_NT_465331v1 13504 14127 CR1-H 377 + 13504 14127 0 2 209,378, 0,245, +,+, 621254 LINE CR1 585 chrUn_NT_465331v1 16008 16628 CR1-H 377 + 16008 16628 0 2 208,376, 0,244, +,+, 621257 LINE CR1 585 chrUn_NT_465331v1 18493 18772 CR1-H 524 + 18493 18772 0 2 204,44, 0,235, +,+, 621260 LINE CR1 585 chrUn_NT_465332v1 1646 3774 GGXHOI 403 - 1646 3774 0 4 518,396,934,212, 0,537,953,1916, -,-,-,-, 621263 Satellite W-chromosome 585 chrUn_NT_465332v1 4525 5262 GGXHOI 405 - 4525 5262 0 2 130,593, 0,144, -,-, 621265 Satellite W-chromosome 585 chrUn_NT_465332v1 6849 8021 GGXHOI 377 - 6849 8021 0 2 636,516, 0,656, -,-, 621269 Satellite W-chromosome 585 chrUn_NT_465332v1 8152 13739 GGXHOI 386 - 8152 13739 0 10 565,359,836,689,392,602,561,355,563,466, 0,580,959,1814,2522,2934,3592,4168,4543,5121, -,-,-,-,-,-,-,-,-,-, 621270 Satellite W-chromosome 585 chrUn_NT_465332v1 13805 14676 GGXHOI 356 - 13805 14676 0 2 563,289, 0,582, -,-, 621271 Satellite W-chromosome 585 chrUn_NT_465332v1 14940 16918 GGXHOI 375 - 14940 16918 0 3 533,390,1016, 0,552,962, -,-,-, 621272 Satellite W-chromosome 585 chrUn_NT_465332v1 17570 18979 GGXHOI 371 - 17570 18979 0 2 938,451, 0,958, -,-, 621274 Satellite W-chromosome 585 chrUn_NT_465333v1 2346 3380 GGXHOI 310 - 2346 3380 0 2 300,714, 0,320, -,-, 621278 Satellite W-chromosome 585 chrUn_NT_465333v1 9233 9592 (CAAGG)n 496 + 9233 9592 0 2 184,156, 0,203, +,+, 621286 Simple_repeat Simple_repeat 585 chrUn_NT_465333v1 9645 9878 (CAAGG)n 465 + 9645 9878 0 2 24,184, 0,49, +,+, 621288 Simple_repeat Simple_repeat 585 chrUn_NT_465333v1 10020 10645 (CCTTG)n 515 + 10020 10645 0 2 227,374, 0,251, +,+, 621290 Simple_repeat Simple_repeat 585 chrUn_NT_465333v1 11350 11892 (CAAGG)n 421 + 11350 11892 0 2 148,371, 0,171, +,+, 621295 Simple_repeat Simple_repeat 585 chrUn_NT_465333v1 11980 12529 (CAAGG)n 447 + 11980 12529 0 3 183,125,26, 0,215,523, +,+,+, 621297 Simple_repeat Simple_repeat 585 chrUn_NT_465333v1 15023 16650 GGXHOI 368 - 15023 16650 0 2 511,1053, 0,574, -,-, 621306 Satellite W-chromosome 585 chrUn_NT_465336v1 2044 5972 GGXHOI 348 - 2044 5972 0 6 612,1973,148,600,183,313, 0,628,2617,2794,3412,3615, -,-,-,-,-,-, 621330 Satellite W-chromosome 585 chrUn_NT_465336v1 6604 9196 GGXHOI 343 - 6604 9196 0 5 182,313,340,850,795, 0,197,533,907,1797, -,-,-,-,-, 621333 Satellite W-chromosome 585 chrUn_NT_465336v1 9458 18114 GGXHOI 401 - 9458 18114 0 10 542,1373,887,1091,896,472,1410,976,475,365, 0,589,1980,2879,3985,4893,5383,6811,7799,8291, -,-,-,-,-,-,-,-,-,-, 621334 Satellite W-chromosome 585 chrUn_NT_465337v1 768 2858 (CGAGG)n 509 + 768 2858 0 4 187,1084,532,182, 0,232,1350,1908, +,+,+,+, 621339 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 3479 4256 (CGAGG)n 507 + 3479 4256 0 2 177,561, 0,216, +,+, 621344 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 4687 5700 (CGAGG)n 544 + 4687 5700 0 3 177,262,216, 0,207,797, +,+,+, 621348 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 5713 6896 (CGAGG)n 571 + 5713 6896 0 3 249,278,435, 0,291,748, +,+,+, 621352 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 7774 8371 (CGAGG)n 520 + 7774 8371 0 2 225,342, 0,255, +,+, 621356 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 8435 8823 (CGAGG)n 558 + 8435 8823 0 2 179,183, 0,205, +,+, 621358 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 9444 9838 (CGAGG)n 511 + 9444 9838 0 2 176,180, 0,214, +,+, 621363 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 9962 10598 (CGAGG)n 510 + 9962 10598 0 2 351,109, 0,527, +,+, 621365 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 10653 11666 (CGAGG)n 536 + 10653 11666 0 3 207,85,217, 0,382,796, +,+,+, 621369 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 11679 13593 (CGAGG)n 551 + 11679 13593 0 4 249,278,435,714, 0,291,748,1200, +,+,+,+, 621374 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 14790 15831 (CGAGG)n 504 + 14790 15831 0 2 179,689, 0,352, +,+, 621381 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 16260 17100 (CGAGG)n 524 + 16260 17100 0 2 627,178, 0,662, +,+, 621386 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 17187 18147 (CGAGG)n 542 + 17187 18147 0 3 93,404,108, 0,271,852, +,+,+, 621388 Simple_repeat Simple_repeat 585 chrUn_NT_465337v1 18257 18844 (CGAGG)n 565 + 18257 18844 0 3 176,177,170, 0,208,417, +,+,+, 621392 Simple_repeat Simple_repeat 585 chrUn_NT_465338v1 2259 2987 GGXHOI 568 - 2259 2987 0 2 490,18, 0,710, -,-, 621399 Satellite W-chromosome 585 chrUn_NT_465338v1 3058 11385 GGXHOI 546 - 3058 11385 0 12 558,824,583,43,613,92,689,771,329,238,274,167, 0,893,1968,2922,2983,4006,4112,5006,6029,7119,7399,8160, -,-,-,-,-,-,-,-,-,-,-,-, 621401 Satellite W-chromosome 585 chrUn_NT_465338v1 11486 12442 GGXHOI 578 - 11486 12442 0 2 160,752, 0,204, -,-, 621410 Satellite W-chromosome 585 chrUn_NT_465338v1 12481 14560 GGXHOI 576 - 12481 14560 0 3 617,428,583, 0,855,1496, -,-,-, 621412 Satellite W-chromosome 585 chrUn_NT_465338v1 14574 15534 GGXHOI 482 - 14574 15534 0 2 360,385, 0,575, -,-, 621416 Satellite W-chromosome 585 chrUn_NT_465338v1 17554 18978 GGXHOI 548 - 17554 18978 0 2 362,591, 0,833, -,-, 621422 Satellite W-chromosome 585 chrUn_NT_465339v1 1347 2165 GGXHOI 387 - 1347 2165 0 2 443,359, 0,459, -,-, 621427 Satellite W-chromosome 585 chrUn_NT_465339v1 3215 4002 GGXHOI 391 - 3215 4002 0 3 292,107,292, 0,335,495, -,-,-, 621430 Satellite W-chromosome 585 chrUn_NT_465339v1 4236 4986 GGXHOI 370 - 4236 4986 0 2 360,370, 0,380, -,-, 621431 Satellite W-chromosome 585 chrUn_NT_465339v1 7240 9139 GGXHOI 395 - 7240 9139 0 2 398,1481, 0,418, -,-, 621434 Satellite W-chromosome 585 chrUn_NT_465339v1 9227 11630 GGXHOI 404 - 9227 11630 0 7 477,160,242,807,187,89,294, 0,497,669,929,1756,2006,2109, -,-,-,-,-,-,-, 621435 Satellite W-chromosome 585 chrUn_NT_465339v1 12431 14282 GGXHOI 395 - 12431 14282 0 3 438,954,400, 0,473,1451, -,-,-, 621437 Satellite W-chromosome 585 chrUn_NT_465339v1 14870 16031 GGXHOI 392 - 14870 16031 0 2 362,781, 0,380, -,-, 621439 Satellite W-chromosome 585 chrUn_NT_465339v1 16134 17889 GGXHOI 337 - 16134 17889 0 3 814,332,576, 0,827,1179, -,-,-, 621440 Satellite W-chromosome 585 chrUn_NT_465340v1 2380 3499 GGXHOI 328 + 2380 3499 0 5 335,146,209,59,252, 0,376,570,797,867, +,+,+,+,+, 621443 Satellite W-chromosome 585 chrUn_NT_465340v1 3595 4462 GGXHOI 388 + 3595 4462 0 2 572,282, 0,585, +,+, 621444 Satellite W-chromosome 585 chrUn_NT_465340v1 4673 5514 GGXHOI 389 + 4673 5514 0 3 135,217,461, 0,152,380, +,+,+, 621445 Satellite W-chromosome 585 chrUn_NT_465341v1 3273 5324 GGLTR7-int 654 - 3273 5324 0 3 33,74,1316, 0,34,735, -,-,-, 621450 LTR ERV1 585 chrUn_NT_465342v1 13304 16585 GGXHOI 506 - 13304 16585 0 3 1047,765,1386, 0,1071,1895, -,-,-, 621471 Satellite W-chromosome 585 chrUn_NT_465343v1 1253 18923 GGXHOI 379 + 1253 18923 0 16 1140,1496,1102,1302,1308,1306,1516,1101,1512,1311,1313,228,1050,450,628,507, 0,1172,2692,3826,5160,6500,7838,9377,10510,12045,13381,14713,14960,16034,16516,17163, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 621476 Satellite W-chromosome 585 chrUn_NT_465344v1 1449 2072 CR1-H 377 - 1449 2072 0 2 378,209, 0,414, -,-, 621478 LINE CR1 585 chrUn_NT_465344v1 3953 4577 CR1-H 378 - 3953 4577 0 2 379,209, 0,415, -,-, 621481 LINE CR1 585 chrUn_NT_465344v1 4595 5740 CR1-C2 686 + 4595 5740 0 2 133,86, 0,1059, +,+, 621482 LINE CR1 585 chrUn_NT_465344v1 8675 9926 Char12Mar1_GG 589 - 8675 9926 0 2 120,580, 0,671, -,-, 621486 DNA hAT-Charlie 585 chrUn_NT_465344v1 12382 13005 CR1-H 377 - 12382 13005 0 2 378,209, 0,414, -,-, 621489 LINE CR1 585 chrUn_NT_465344v1 13023 14163 CR1-C2 686 + 13023 14163 0 2 133,85, 0,1055, +,+, 621490 LINE CR1 585 chrUn_NT_465344v1 17090 18306 Char12Mar1_GG 527 - 17090 18306 0 2 116,548, 0,668, -,-, 621494 DNA hAT-Charlie 585 chrUn_NT_465345v1 8161 11753 GGXHOI 558 + 8161 11753 0 3 650,1759,482, 0,969,3110, +,+,+, 621500 Satellite W-chromosome 585 chrUn_NT_465345v1 12697 16723 GGXHOI 566 + 12697 16723 0 4 59,146,211,142, 0,384,2218,3884, +,+,+,+, 621504 Satellite W-chromosome 585 chrUn_NT_465345v1 16742 18959 GGXHOI 566 + 16742 18959 0 4 701,29,437,74, 0,1615,1684,2143, +,+,+,+, 621509 Satellite W-chromosome 585 chrUn_NT_465346v1 2482 7122 Sat-CR1_GG 156 - 2482 7122 0 3 43,61,882, 0,2512,3758, -,-,-, 621512 Satellite Satellite 585 chrUn_NT_465346v1 7944 11764 GGXHOI 544 - 7944 11764 0 5 198,208,17,314,695, 0,805,1225,1279,3125, -,-,-,-,-, 621517 Satellite W-chromosome 585 chrUn_NT_465346v1 12060 16716 GGXHOI 566 - 12060 16716 0 3 475,192,2327, 0,833,2329, -,-,-, 621524 Satellite W-chromosome 585 chrUn_NT_465347v1 4315 6988 GGXHOI 416 - 4315 6988 0 4 1342,312,565,399, 0,1364,1693,2274, -,-,-,-, 621532 Satellite W-chromosome 585 chrUn_NT_465347v1 7068 12320 GGXHOI 373 - 7068 12320 0 7 549,250,464,1187,1936,310,412, 0,565,860,1347,2556,4512,4840, -,-,-,-,-,-,-, 621533 Satellite W-chromosome 585 chrUn_NT_465347v1 12445 15098 GGXHOI 433 - 12445 15098 0 3 1678,162,749, 0,1695,1904, -,-,-, 621534 Satellite W-chromosome 585 chrUn_NT_465347v1 15184 16063 GGXHOI 371 - 15184 16063 0 2 591,271, 0,608, -,-, 621535 Satellite W-chromosome 585 chrUn_NT_465347v1 16190 18877 GGXHOI 417 - 16190 18877 0 4 365,156,1097,1018, 0,387,558,1669, -,-,-,-, 621536 Satellite W-chromosome 585 chrUn_NT_465350v1 2144 6345 GGXHOI 402 - 2144 6345 0 10 405,124,1141,652,149,67,429,103,220,750, 0,417,558,1713,2405,2565,2651,3092,3212,3451, -,-,-,-,-,-,-,-,-,-, 621568 Satellite W-chromosome 585 chrUn_NT_465350v1 6426 13119 GGXHOI 446 - 6426 13119 0 10 188,526,1155,810,157,354,651,230,1647,832, 0,206,747,1913,2741,2912,3281,3950,4199,5861, -,-,-,-,-,-,-,-,-,-, 621569 Satellite W-chromosome 585 chrUn_NT_465350v1 13203 16361 GGXHOI 441 - 13203 16361 0 7 237,474,849,441,549,104,405, 0,248,746,1610,2069,2631,2753, -,-,-,-,-,-,-, 621570 Satellite W-chromosome 585 chrUn_NT_465350v1 16479 16781 GGXHOI 259 - 16479 16781 0 2 130,119, 0,183, -,-, 621571 Satellite W-chromosome 585 chrUn_NT_465352v1 18749 18907 GA-rich 544 + 18749 18907 0 2 17,67, 0,91, +,+, 621627 Low_complexity Low_complexity 585 chrUn_NT_465354v1 10828 13286 GGLTR7-int 586 + 10828 13286 0 2 338,793, 0,1665, +,+, 621649 LTR ERV1 585 chrUn_NT_465354v1 13298 15724 GGERV10_LTR 822 - 13298 15724 0 2 38,41, 0,2385, -,-, 621652 LTR ERVL 585 chrUn_NT_465354v1 13465 15682 GGLTR10D-int 928 - 13465 15682 0 2 364,1850, 0,367, -,-, 621653 LTR ERVK 585 chrUn_NT_465354v1 16311 16721 (CGAGG)n 572 + 16311 16721 0 2 180,205, 0,205, +,+, 621658 Simple_repeat Simple_repeat 585 chrUn_NT_465354v1 18603 18877 G-rich 196 + 18603 18877 0 2 79,116, 0,158, +,+, 621667 Low_complexity Low_complexity 585 chrUn_NT_465356v1 699 9366 GGXHOI 544 - 699 9366 0 6 697,680,326,267,278,133, 0,1025,3335,4907,5186,8534, -,-,-,-,-,-, 621679 Satellite W-chromosome 585 chrUn_NT_465356v1 9409 10765 GGXHOI 542 - 9409 10765 0 2 407,706, 0,650, -,-, 621684 Satellite W-chromosome 585 chrUn_NT_465356v1 10938 17064 Sat-CR1_GG 156 - 10938 17064 0 2 743,4593, 0,1533, -,-, 621687 Satellite Satellite 585 chrUn_NT_465356v1 12508 17118 GGXHOI 564 - 12508 17118 0 2 1629,2730, 0,1880, -,-, 621689 Satellite W-chromosome 585 chrUn_NT_465358v1 232 9627 GGXHOI 372 - 232 9627 0 14 141,436,481,388,147,999,1240,1203,1241,1535,269,229,150,692, 0,162,614,1116,1523,1685,2703,3964,5178,6437,7988,8294,8542,8703, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 621696 Satellite W-chromosome 585 chrUn_NT_465358v1 10112 12136 GGXHOI 335 - 10112 12136 0 3 685,1094,167, 0,708,1857, -,-,-, 621698 Satellite W-chromosome 585 chrUn_NT_465358v1 12352 15118 GGXHOI 350 - 12352 15118 0 7 160,326,243,811,415,416,224, 0,174,522,783,1632,2103,2542, -,-,-,-,-,-,-, 621699 Satellite W-chromosome 585 chrUn_NT_465358v1 16001 18883 GGXHOI 375 - 16001 18883 0 3 1452,775,620, 0,1469,2262, -,-,-, 621701 Satellite W-chromosome 585 chrUn_NT_465359v1 703 1081 (TTAGGG)n 530 + 703 1081 0 2 187,171, 0,207, +,+, 621704 Simple_repeat Simple_repeat 585 chrUn_NT_465361v1 1044 1541 GGXHOI 348 - 1044 1541 0 2 297,147, 0,350, -,-, 621712 Satellite W-chromosome 585 chrUn_NT_465361v1 3753 18831 GGXHOI 417 - 3753 18831 0 5 9791,2299,1592,544,738, 0,9806,12127,13733,14340, -,-,-,-,-, 621715 Satellite W-chromosome 585 chrUn_NT_465362v1 8869 11039 CR1-C 847 - 8869 11039 0 2 624,1546, 0,624, -,-, 621724 LINE CR1 585 chrUn_NT_465362v1 13208 14704 GGLTR7B 576 - 13208 14704 0 2 114,889, 0,607, -,-, 621727 LTR ERV1 585 chrUn_NT_465364v1 10557 14082 GGLTR7-int 403 - 10557 14082 0 4 277,948,1619,101, 0,324,1367,3424, -,-,-,-, 621750 LTR ERV1 585 chrUn_NT_465365v1 476 681 CR1-B2 705 + 476 681 0 2 54,55, 0,150, +,+, 621760 LINE CR1 585 chrUn_NT_465365v1 3241 3630 (GCATG)n 383 + 3241 3630 0 2 169,167, 0,222, +,+, 621765 Simple_repeat Simple_repeat 585 chrUn_NT_465365v1 17058 17263 (CC)n 445 + 17058 17263 0 2 89,59, 0,146, +,+, 621774 Simple_repeat Simple_repeat 585 chrUn_NT_465366v1 15373 15995 CR1-H 685 - 15373 15995 0 2 138,478, 0,144, -,-, 621790 LINE CR1 585 chrUn_NT_465366v1 18195 18828 CR1-H 673 - 18195 18828 0 2 117,516, 0,117, -,-, 621794 LINE CR1 585 chrUn_NT_465368v1 17780 18575 CR1-H 779 - 17780 18575 0 2 245,550, 0,245, -,-, 621825 LINE CR1 585 chrUn_NT_465370v1 887 2996 GGXHOI 401 - 887 2996 0 4 505,1065,147,344, 0,529,1607,1765, -,-,-,-, 621840 Satellite W-chromosome 585 chrUn_NT_465370v1 3082 4078 GGXHOI 405 - 3082 4078 0 4 362,108,146,339, 0,379,500,657, -,-,-,-, 621841 Satellite W-chromosome 585 chrUn_NT_465370v1 4163 5167 GGXHOI 407 - 4163 5167 0 3 490,147,339, 0,503,665, -,-,-, 621842 Satellite W-chromosome 585 chrUn_NT_465370v1 5252 6248 GGXHOI 378 - 5252 6248 0 2 686,295, 0,701, -,-, 621843 Satellite W-chromosome 585 chrUn_NT_465370v1 6334 7334 GGXHOI 379 - 6334 7334 0 2 650,339, 0,661, -,-, 621844 Satellite W-chromosome 585 chrUn_NT_465370v1 7420 9521 GGXHOI 399 - 7420 9521 0 4 498,142,1080,340, 0,512,670,1761, -,-,-,-, 621845 Satellite W-chromosome 585 chrUn_NT_465370v1 9606 10590 GGXHOI 402 - 9606 10590 0 3 490,146,323, 0,504,661, -,-,-, 621846 Satellite W-chromosome 585 chrUn_NT_465370v1 10694 13867 GGXHOI 402 - 10694 13867 0 5 561,149,1030,1075,292, 0,582,746,1791,2881, -,-,-,-,-, 621847 Satellite W-chromosome 585 chrUn_NT_465370v1 13954 14963 GGXHOI 402 - 13954 14963 0 3 497,147,339, 0,510,670, -,-,-, 621848 Satellite W-chromosome 585 chrUn_NT_465370v1 15048 16574 GGXHOI 393 - 15048 16574 0 2 641,874, 0,652, -,-, 621849 Satellite W-chromosome 585 chrUn_NT_465370v1 16640 17139 GGXHOI 417 - 16640 17139 0 2 149,335, 0,164, -,-, 621850 Satellite W-chromosome 585 chrUn_NT_465371v1 2861 3257 (TTAGGG)n 528 + 2861 3257 0 2 166,176, 0,220, +,+, 621857 Simple_repeat Simple_repeat 585 chrUn_NT_465371v1 12216 13068 CR1-D 319 - 12216 13068 0 2 643,182, 0,670, -,-, 621863 LINE CR1 585 chrUn_NT_465372v1 14198 14327 GA-rich 376 + 14198 14327 0 2 42,32, 0,97, +,+, 621904 Low_complexity Low_complexity 585 chrUn_NT_465373v1 7178 7404 CR1-Y4 595 - 7178 7404 0 2 104,68, 0,158, -,-, 621928 LINE CR1 585 chrUn_NT_465373v1 12219 12374 CR1-Y2 482 + 12219 12374 0 2 85,70, 0,85, +,+, 621946 LINE CR1 585 chrUn_NT_465373v1 12355 12555 CR1-Y2 678 + 12355 12555 0 3 58,58,58, 0,72,142, +,+,+, 621947 LINE CR1 585 chrUn_NT_465373v1 12694 12850 CR1-Y2 335 + 12694 12850 0 2 87,69, 0,87, +,+, 621950 LINE CR1 585 chrUn_NT_465373v1 12904 13032 CR1-Y2 533 + 12904 13032 0 2 58,70, 0,58, +,+, 621952 LINE CR1 585 chrUn_NT_465373v1 13159 13311 CR1-Y2 476 + 13159 13311 0 2 89,63, 0,89, +,+, 621955 LINE CR1 585 chrUn_NT_465373v1 14121 14375 CR1-Y2 640 + 14121 14375 0 4 63,58,57,57, 0,70,140,197, +,+,+,+, 621968 LINE CR1 585 chrUn_NT_465373v1 14459 14663 CR1-Y2 675 + 14459 14663 0 3 58,54,54, 0,70,150, +,+,+, 621970 LINE CR1 585 chrUn_NT_465373v1 14729 14878 CR1-Y2 574 + 14729 14878 0 2 61,61, 0,88, +,+, 621971 LINE CR1 585 chrUn_NT_465373v1 16641 16907 CR1-Y2 547 + 16641 16907 0 2 51,84, 0,182, +,+, 621989 LINE CR1 585 chrUn_NT_465374v1 4624 5673 GGXHOI 378 - 4624 5673 0 2 514,472, 0,577, -,-, 621996 Satellite W-chromosome 585 chrUn_NT_465374v1 5772 6823 GGXHOI 378 - 5772 6823 0 2 516,472, 0,579, -,-, 621997 Satellite W-chromosome 585 chrUn_NT_465374v1 10367 11810 GGXHOI 361 - 10367 11810 0 3 198,222,971, 0,232,472, -,-,-, 622003 Satellite W-chromosome 585 chrUn_NT_465374v1 13558 14998 GGXHOI 348 - 13558 14998 0 2 503,876, 0,564, -,-, 622006 Satellite W-chromosome 585 chrUn_NT_465375v1 1600 11560 GGXHOI 355 + 1600 11560 0 6 8311,285,123,628,325,159, 0,8328,8625,8806,9453,9801, +,+,+,+,+,+, 622011 Satellite W-chromosome 585 chrUn_NT_465375v1 15865 16903 GGXHOI 339 + 15865 16903 0 2 638,349, 0,689, +,+, 622017 Satellite W-chromosome 585 chrUn_NT_465375v1 17712 18401 GGXHOI 309 + 17712 18401 0 2 510,122, 0,567, +,+, 622019 Satellite W-chromosome 585 chrUn_NT_465376v1 1463 18780 GGXHOI 437 - 1463 18780 0 12 425,4730,776,1313,315,1306,2216,456,1209,2907,110,1386, 0,439,5186,5979,7308,7641,8964,11198,11665,12892,15810,15931, -,-,-,-,-,-,-,-,-,-,-,-, 622023 Satellite W-chromosome 585 chrUn_NT_465377v1 4806 6248 GGXHOI 358 - 4806 6248 0 3 148,724,537, 0,164,905, -,-,-, 622027 Satellite W-chromosome 585 chrUn_NT_465377v1 6995 7609 GGXHOI 304 - 6995 7609 0 2 207,346, 0,268, -,-, 622028 Satellite W-chromosome 585 chrUn_NT_465377v1 7681 17589 GGXHOI 361 - 7681 17589 0 8 951,4445,958,932,580,374,838,622, 0,967,5434,6429,7422,8013,8401,9286, -,-,-,-,-,-,-,-, 622029 Satellite W-chromosome 585 chrUn_NT_465378v1 2289 2912 CR1-H 673 + 2289 2912 0 2 478,139, 0,484, +,+, 622032 LINE CR1 585 chrUn_NT_465378v1 14069 15390 CR1-H 622 + 14069 15390 0 2 1210,111, 0,1210, +,+, 622045 LINE CR1 585 chrUn_NT_465379v1 8254 8807 CR1-X 449 - 8254 8807 0 3 216,132,168, 0,253,385, -,-,-, 622056 LINE CR1 585 chrUn_NT_465379v1 13620 14744 CR1-B2 713 - 13620 14744 0 2 896,225, 0,899, -,-, 622063 LINE CR1 585 chrUn_NT_465380v1 9246 11272 GGXHOI 374 - 9246 11272 0 3 273,429,1279, 0,287,747, -,-,-, 622066 Satellite W-chromosome 585 chrUn_NT_465380v1 11437 14045 GGXHOI 363 - 11437 14045 0 4 870,1054,427,190, 0,888,1960,2418, -,-,-,-, 622067 Satellite W-chromosome 585 chrUn_NT_465380v1 14367 14867 GGXHOI 357 - 14367 14867 0 2 242,244, 0,256, -,-, 622068 Satellite W-chromosome 585 chrUn_NT_465380v1 16059 17407 GGXHOI 386 - 16059 17407 0 2 830,486, 0,862, -,-, 622071 Satellite W-chromosome 585 chrUn_NT_465380v1 17494 18735 GGXHOI 408 - 17494 18735 0 2 720,488, 0,753, -,-, 622072 Satellite W-chromosome 585 chrUn_NT_465382v1 8377 8997 CR1-H 661 - 8377 8997 0 2 140,474, 0,146, -,-, 622083 LINE CR1 585 chrUn_NT_465382v1 11477 11890 CR1-H 473 - 11477 11890 0 2 148,265, 0,148, -,-, 622087 LINE CR1 585 chrUn_NT_465384v1 5929 7410 GGXHOI 379 + 5929 7410 0 2 960,505, 0,976, +,+, 622113 Satellite W-chromosome 585 chrUn_NT_465384v1 12657 14041 GGXHOI 383 - 12657 14041 0 2 441,890, 0,494, -,-, 622120 Satellite W-chromosome 585 chrUn_NT_465384v1 14131 18169 GGXHOI 391 - 14131 18169 0 6 442,1396,112,145,840,1004, 0,485,1893,2018,2178,3034, -,-,-,-,-,-, 622121 Satellite W-chromosome 585 chrUn_NT_465385v1 7663 13585 GGERV10_LTR 857 - 7663 13585 0 4 158,62,5372,222, 0,265,327,5700, -,-,-,-, 622133 LTR ERVL 585 chrUn_NT_465385v1 15835 17817 CR1-F 838 + 15835 17817 0 2 342,1374, 0,608, +,+, 622137 LINE CR1 585 chrUn_NT_465386v1 580 7351 GGXHOI 439 - 580 7351 0 4 4286,567,1425,442, 0,4303,4887,6329, -,-,-,-, 622143 Satellite W-chromosome 585 chrUn_NT_465386v1 7415 18739 GGXHOI 432 - 7415 18739 0 7 1335,357,1682,3168,323,2437,1925, 0,1352,1725,3424,6606,6940,9399, -,-,-,-,-,-,-, 622144 Satellite W-chromosome 585 chrUn_NT_465387v1 14679 15345 ENS1-int 339 - 14679 15345 0 2 207,130, 0,536, -,-, 622155 LTR ERVL 585 chrUn_NT_465388v1 5285 5951 ENS1-int 339 - 5285 5951 0 2 207,130, 0,536, -,-, 622162 LTR ERVL 585 chrUn_NT_465388v1 12696 13376 ENS1-int 347 + 12696 13376 0 2 130,104, 0,576, +,+, 622171 LTR ERVL 585 chrUn_NT_465389v1 13450 14069 CR1-H 653 - 13450 14069 0 2 138,475, 0,144, -,-, 622185 LINE CR1 585 chrUn_NT_465389v1 17426 17881 CR1-H 671 - 17426 17881 0 2 162,293, 0,162, -,-, 622189 LINE CR1 585 chrUn_NT_465390v1 14560 15015 GGLTR3F2 538 - 14560 15015 0 2 200,221, 0,234, -,-, 622200 LTR ERVL 585 chrUn_NT_465390v1 15444 15586 G-rich 414 + 15444 15586 0 2 41,54, 0,88, +,+, 622205 Low_complexity Low_complexity 585 chrUn_NT_465391v1 1300 2714 GGXHOI 394 - 1300 2714 0 2 668,689, 0,725, -,-, 622212 Satellite W-chromosome 585 chrUn_NT_465391v1 6516 7666 GGXHOI 447 - 6516 7666 0 2 485,649, 0,501, -,-, 622216 Satellite W-chromosome 585 chrUn_NT_465391v1 8680 10001 GGXHOI 385 - 8680 10001 0 3 627,210,443, 0,643,878, -,-,-, 622218 Satellite W-chromosome 585 chrUn_NT_465391v1 10164 12350 GGXHOI 415 - 10164 12350 0 3 749,897,481, 0,790,1705, -,-,-, 622219 Satellite W-chromosome 585 chrUn_NT_465391v1 12610 14601 GGXHOI 419 - 12610 14601 0 4 445,764,209,453, 0,505,1311,1538, -,-,-,-, 622220 Satellite W-chromosome 585 chrUn_NT_465391v1 16027 17445 GGXHOI 399 - 16027 17445 0 3 267,725,394, 0,285,1024, -,-,-, 622223 Satellite W-chromosome 585 chrUn_NT_465391v1 17826 18732 GGXHOI 397 - 17826 18732 0 2 730,136, 0,770, -,-, 622224 Satellite W-chromosome 585 chrUn_NT_465392v1 12352 12979 CR1-H 675 - 12352 12979 0 2 139,482, 0,145, -,-, 622239 LINE CR1 585 chrUn_NT_465392v1 15704 16181 CR1-H 527 - 15704 16181 0 2 176,301, 0,176, -,-, 622244 LINE CR1 585 chrUn_NT_465395v1 10515 10971 CR1-H 656 + 10515 10971 0 2 295,161, 0,295, +,+, 622272 LINE CR1 585 chrUn_NT_465395v1 13131 13760 CR1-H 676 + 13131 13760 0 2 471,139, 0,490, +,+, 622275 LINE CR1 585 chrUn_NT_465396v1 12240 14120 GGLTR7-int 601 - 12240 14120 0 3 74,656,521, 0,703,1359, -,-,-, 622290 LTR ERV1 585 chrUn_NT_465397v1 240 1562 GGXHOI 340 + 240 1562 0 3 546,303,392, 0,566,930, +,+,+, 622293 Satellite W-chromosome 585 chrUn_NT_465397v1 1672 5095 GGXHOI 352 + 1672 5095 0 4 356,632,348,1947, 0,417,1066,1476, +,+,+,+, 622294 Satellite W-chromosome 585 chrUn_NT_465397v1 5168 9042 GGXHOI 351 + 5168 9042 0 4 979,1198,999,593, 0,1000,2219,3281, +,+,+,+, 622295 Satellite W-chromosome 585 chrUn_NT_465397v1 9125 11356 GGXHOI 359 + 9125 11356 0 4 362,430,708,591, 0,423,911,1640, +,+,+,+, 622296 Satellite W-chromosome 585 chrUn_NT_465397v1 12303 13073 GGXHOI 308 + 12303 13073 0 2 601,153, 0,617, +,+, 622299 Satellite W-chromosome 585 chrUn_NT_465397v1 13282 17458 GGXHOI 339 + 13282 17458 0 5 2197,717,266,544,323, 0,2250,2988,3275,3853, +,+,+,+,+, 622300 Satellite W-chromosome 585 chrUn_NT_465400v1 392 18709 GGXHOI 370 + 392 18709 0 18 1915,1380,1415,153,1492,1091,1003,388,153,428,844,2602,1378,683,1155,422,1296,164, 0,1937,3380,4807,4977,6527,7634,8659,9059,9229,9669,10525,13139,14529,15228,16405,16845,18153, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 622360 Satellite W-chromosome 585 chrUn_NT_465401v1 975 3552 GGXHOI 409 + 975 3552 0 2 413,2144, 0,433, +,+, 622362 Satellite W-chromosome 585 chrUn_NT_465401v1 3637 8886 GGXHOI 409 + 3637 8886 0 3 413,2647,2149, 0,433,3100, +,+,+, 622363 Satellite W-chromosome 585 chrUn_NT_465401v1 8972 14222 GGXHOI 405 + 8972 14222 0 3 413,2648,2149, 0,433,3101, +,+,+, 622364 Satellite W-chromosome 585 chrUn_NT_465401v1 14306 16638 GGXHOI 389 + 14306 16638 0 2 292,1982, 0,350, +,+, 622365 Satellite W-chromosome 585 chrUn_NT_465402v1 7271 8319 GGXHOI 375 + 7271 8319 0 3 327,504,136, 0,387,912, +,+,+, 622375 Satellite W-chromosome 585 chrUn_NT_465402v1 8591 10469 GGXHOI 375 + 8591 10469 0 3 258,888,695, 0,279,1183, +,+,+, 622376 Satellite W-chromosome 585 chrUn_NT_465402v1 11687 13730 GGXHOI 401 + 11687 13730 0 2 1355,632, 0,1411, +,+, 622378 Satellite W-chromosome 585 chrUn_NT_465402v1 13855 14791 GGXHOI 409 + 13855 14791 0 2 581,319, 0,617, +,+, 622379 Satellite W-chromosome 585 chrUn_NT_465402v1 16458 16819 GGXHOI 393 + 16458 16819 0 2 143,157, 0,204, +,+, 622382 Satellite W-chromosome 585 chrUn_NT_465402v1 17909 18702 GGXHOI 400 + 17909 18702 0 2 330,406, 0,387, +,+, 622385 Satellite W-chromosome 585 chrUn_NT_465403v1 2594 2741 G-rich 592 + 2594 2741 0 2 38,57, 0,90, +,+, 622387 Low_complexity Low_complexity 585 chrUn_NT_465403v1 4699 7105 GGLTR7-int 825 - 4699 7105 0 5 112,258,1552,337,136, 0,113,372,1933,2270, -,-,-,-,-, 622389 LTR ERV1 585 chrUn_NT_465404v1 2677 3804 CR1-B2 690 - 2677 3804 0 2 899,225, 0,902, -,-, 622394 LINE CR1 585 chrUn_NT_465404v1 9803 10827 CR1-B2 571 - 9803 10827 0 2 797,224, 0,800, -,-, 622399 LINE CR1 585 chrUn_NT_465404v1 16915 18037 CR1-B2 673 - 16915 18037 0 2 891,228, 0,894, -,-, 622407 LINE CR1 585 chrUn_NT_465405v1 9565 18700 GGXHOI 428 - 9565 18700 0 7 435,123,3237,319,1005,3460,418, 0,454,592,3884,4220,5245,8717, -,-,-,-,-,-,-, 622410 Satellite W-chromosome 585 chrUn_NT_465406v1 6114 13759 GGXHOI 426 - 6114 13759 0 5 376,182,549,989,5476, 0,391,599,1165,2169, -,-,-,-,-, 622412 Satellite W-chromosome 585 chrUn_NT_465406v1 14608 18698 GGXHOI 378 - 14608 18698 0 5 609,339,761,1895,413, 0,628,982,1765,3677, -,-,-,-,-, 622414 Satellite W-chromosome 585 chrUn_NT_465407v1 2671 4905 GGXHOI 575 + 2671 4905 0 3 360,829,792, 0,563,1442, +,+,+, 622417 Satellite W-chromosome 585 chrUn_NT_465407v1 7131 7921 GGXHOI 596 + 7131 7921 0 2 360,227, 0,563, +,+, 622422 Satellite W-chromosome 585 chrUn_NT_465407v1 8583 11923 GGXHOI 582 + 8583 11923 0 2 2062,1090, 0,2250, +,+, 622425 Satellite W-chromosome 585 chrUn_NT_465407v1 12236 16967 GGXHOI 564 + 12236 16967 0 3 112,2954,1274, 0,315,3457, +,+,+, 622428 Satellite W-chromosome 585 chrUn_NT_465407v1 17049 18579 GGXHOI 456 + 17049 18579 0 2 1296,193, 0,1337, +,+, 622431 Satellite W-chromosome 585 chrUn_NT_465408v1 841 3137 ENS3-int 851 - 841 3137 0 3 926,880,490, 0,926,1806, -,-,-, 622433 LTR ERVL 585 chrUn_NT_465408v1 3134 5439 ENS3-int 934 - 3134 5439 0 3 933,881,491, 0,933,1814, -,-,-, 622434 LTR ERVL 585 chrUn_NT_465408v1 5436 7740 ENS3-int 931 - 5436 7740 0 3 929,885,490, 0,929,1814, -,-,-, 622435 LTR ERVL 585 chrUn_NT_465408v1 7737 10040 ENS3-int 927 - 7737 10040 0 3 932,881,490, 0,932,1813, -,-,-, 622436 LTR ERVL 585 chrUn_NT_465408v1 10037 12337 ENS3-int 932 - 10037 12337 0 3 929,879,492, 0,929,1808, -,-,-, 622437 LTR ERVL 585 chrUn_NT_465408v1 12334 14154 ENS3-int 929 - 12334 14154 0 2 936,884, 0,936, -,-, 622438 LTR ERVL 585 chrUn_NT_465409v1 13154 13521 (CCTTG)n 598 + 13154 13521 0 2 149,52, 0,315, +,+, 622460 Simple_repeat Simple_repeat 585 chrUn_NT_465409v1 13532 13995 (GCCTG)n 546 + 13532 13995 0 2 237,28, 0,435, +,+, 622462 Simple_repeat Simple_repeat 585 chrUn_NT_465410v1 1835 3663 GGERVL-A-int 671 + 1835 3663 0 2 462,1366, 0,462, +,+, 622476 LTR ERVL 585 chrUn_NT_465410v1 6470 6583 (CTTG)n 833 + 6470 6583 0 2 27,23, 0,90, +,+, 622480 Simple_repeat Simple_repeat 585 chrUn_NT_465411v1 2364 5530 GGERV10_LTR 906 - 2364 5530 0 2 219,2947, 0,219, -,-, 622490 LTR ERVL 585 chrUn_NT_465411v1 9312 15760 GGXHOI 395 + 9312 15760 0 6 251,827,3259,601,1257,145, 0,294,1141,4418,5034,6303, +,+,+,+,+,+, 622493 Satellite W-chromosome 585 chrUn_NT_465411v1 15913 18587 GGXHOI 381 + 15913 18587 0 3 1645,136,857, 0,1667,1817, +,+,+, 622494 Satellite W-chromosome 585 chrUn_NT_465412v1 12564 17008 CR1-Y1_Aves 438 - 12564 17008 0 2 274,114, 0,4330, -,-, 622511 LINE CR1 585 chrUn_NT_465412v1 13087 13791 Charlie12_GG 488 - 13087 13791 0 2 518,186, 0,518, -,-, 622513 DNA hAT-Charlie 585 chrUn_NT_465412v1 13791 14039 CR1-Y4 513 + 13791 14039 0 2 187,61, 0,187, +,+, 622514 LINE CR1 585 chrUn_NT_465412v1 14038 16882 CR1-Y 545 - 14038 16882 0 2 227,1519, 0,1325, -,-, 622515 LINE CR1 585 chrUn_NT_465413v1 2212 2936 Sat-CR1_GG 202 + 2212 2936 0 2 379,11, 0,713, +,+, 622524 Satellite Satellite 585 chrUn_NT_465413v1 5817 6900 Sat-CR1_GG 218 + 5817 6900 0 2 740,11, 0,1072, +,+, 622531 Satellite Satellite 585 chrUn_NT_465413v1 7864 8492 Sat-CR1_GG 266 + 7864 8492 0 3 200,112,112, 0,241,516, +,+,+, 622534 Satellite Satellite 585 chrUn_NT_465413v1 11260 12416 Sat-CR1_GG 224 + 11260 12416 0 2 401,699, 0,457, +,+, 622539 Satellite Satellite 585 chrUn_NT_465414v1 13344 14486 CR1-D 732 + 13344 14486 0 2 328,794, 0,348, +,+, 622558 LINE CR1 585 chrUn_NT_465415v1 2419 9937 GGXHOI 401 - 2419 9937 0 6 1360,510,180,1057,3376,899, 0,1392,1956,2152,3224,6619, -,-,-,-,-,-, 622562 Satellite W-chromosome 585 chrUn_NT_465415v1 10025 16945 GGXHOI 381 - 10025 16945 0 5 1579,1183,1510,2140,425, 0,1594,2794,4336,6495, -,-,-,-,-, 622563 Satellite W-chromosome 585 chrUn_NT_465415v1 17013 18644 GGXHOI 284 - 17013 18644 0 2 1227,341, 0,1290, -,-, 622564 Satellite W-chromosome 585 chrUn_NT_465417v1 8155 8778 CR1-H 650 - 8155 8778 0 2 139,484, 0,139, -,-, 622579 LINE CR1 585 chrUn_NT_465417v1 10498 11771 CR1-H 606 - 10498 11771 0 2 117,1156, 0,117, -,-, 622583 LINE CR1 585 chrUn_NT_465417v1 13513 13622 (TTTGC)n 326 + 13513 13622 0 2 52,8, 0,101, +,+, 622584 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 2222 4964 GGERVL-B-int 753 - 2222 4964 0 2 2420,322, 0,2420, -,-, 622593 LTR ERVL 585 chrUn_NT_465418v1 5234 7805 (CCTCG)n 560 + 5234 7805 0 5 672,667,419,391,48, 0,687,1530,1949,2523, +,+,+,+,+, 622595 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 8232 11523 (CCTCG)n 555 + 8232 11523 0 8 409,116,659,176,179,177,366,827, 0,459,751,1441,1643,1879,2086,2464, +,+,+,+,+,+,+,+, 622601 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 11666 12761 (CCTCG)n 556 + 11666 12761 0 2 445,635, 0,460, +,+, 622604 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 12898 13282 (CCTCG)n 511 + 12898 13282 0 2 178,190, 0,194, +,+, 622606 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 14438 15460 (CCTCG)n 547 + 14438 15460 0 2 369,598, 0,424, +,+, 622612 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 15525 17027 (CCTCG)n 511 + 15525 17027 0 4 102,73,489,647, 0,278,366,855, +,+,+,+, 622614 Simple_repeat Simple_repeat 585 chrUn_NT_465418v1 17805 18402 (CCTCG)n 527 + 17805 18402 0 3 176,193,173, 0,204,424, +,+,+, 622618 Simple_repeat Simple_repeat 585 chrUn_NT_465419v1 2927 4202 GGLTR7-int 236 - 2927 4202 0 2 279,296, 0,979, -,-, 622623 LTR ERV1 585 chrUn_NT_465419v1 5075 7955 GGERVL-B-int 668 - 5075 7955 0 2 929,1951, 0,929, -,-, 622625 LTR ERVL 585 chrUn_NT_465419v1 11464 11916 (CAGGC)n 531 + 11464 11916 0 2 220,231, 0,221, +,+, 622636 Simple_repeat Simple_repeat 585 chrUn_NT_465419v1 11926 12195 (CAAGG)n 610 + 11926 12195 0 2 69,200, 0,69, +,+, 622637 Simple_repeat Simple_repeat 585 chrUn_NT_465419v1 12335 13190 CR1-F0 828 + 12335 13190 0 2 720,135, 0,720, +,+, 622638 LINE CR1 585 chrUn_NT_465419v1 17660 17904 G-rich 479 + 17660 17904 0 2 62,150, 0,94, +,+, 622644 Low_complexity Low_complexity 585 chrUn_NT_465420v1 950 2067 CR1-B2 703 - 950 2067 0 2 892,222, 0,895, -,-, 622649 LINE CR1 585 chrUn_NT_465420v1 17554 18579 CR1-B2 661 - 17554 18579 0 2 793,229, 0,796, -,-, 622663 LINE CR1 585 chrUn_NT_465421v1 2598 5545 GGXHOI 402 - 2598 5545 0 2 2160,770, 0,2177, -,-, 622667 Satellite W-chromosome 585 chrUn_NT_465421v1 6483 8801 GGXHOI 399 - 6483 8801 0 3 585,152,1510, 0,625,808, -,-,-, 622669 Satellite W-chromosome 585 chrUn_NT_465421v1 10257 12576 GGXHOI 409 - 10257 12576 0 2 362,1940, 0,379, -,-, 622671 Satellite W-chromosome 585 chrUn_NT_465421v1 15534 16291 GGXHOI 405 - 15534 16291 0 2 127,616, 0,141, -,-, 622676 Satellite W-chromosome 585 chrUn_NT_465421v1 16827 18625 GGXHOI 413 - 16827 18625 0 3 1274,148,339, 0,1297,1459, -,-,-, 622678 Satellite W-chromosome 585 chrUn_NT_465422v1 5883 7621 GGERVL-A-int 759 - 5883 7621 0 2 1281,457, 0,1281, -,-, 622681 LTR ERVL 585 chrUn_NT_465423v1 4775 14570 GGXHOI 387 - 4775 14570 0 3 1411,413,7900, 0,1423,1895, -,-,-, 622690 Satellite W-chromosome 585 chrUn_NT_465423v1 14787 15803 GGXHOI 365 - 14787 15803 0 2 500,465, 0,551, -,-, 622691 Satellite W-chromosome 585 chrUn_NT_465423v1 16079 18528 GGXHOI 365 - 16079 18528 0 3 916,891,573, 0,959,1876, -,-,-, 622692 Satellite W-chromosome 585 chrUn_NT_465424v1 351 3419 GGXHOI 550 - 351 3419 0 6 315,334,194,297,305,261, 0,510,1166,1670,2258,2807, -,-,-,-,-,-, 622694 Satellite W-chromosome 585 chrUn_NT_465424v1 4582 5028 GGXHOI 514 - 4582 5028 0 2 167,237, 0,209, -,-, 622701 Satellite W-chromosome 585 chrUn_NT_465424v1 5043 6786 GGXHOI 546 - 5043 6786 0 2 703,717, 0,1026, -,-, 622703 Satellite W-chromosome 585 chrUn_NT_465424v1 8037 10149 GGXHOI 508 - 8037 10149 0 3 635,306,608, 0,877,1504, -,-,-, 622707 Satellite W-chromosome 585 chrUn_NT_465424v1 10647 16451 GGXHOI 521 - 10647 16451 0 10 655,192,19,298,315,680,717,193,298,361, 0,948,1153,1483,2105,2441,3134,4165,4668,5443, -,-,-,-,-,-,-,-,-,-, 622711 Satellite W-chromosome 585 chrUn_NT_465424v1 16491 18600 GGXHOI 528 - 16491 18600 0 4 295,193,248,135, 0,619,1251,1974, -,-,-,-, 622719 Satellite W-chromosome 585 chrUn_NT_465425v1 509 18295 GGXHOI 388 + 509 18295 0 9 2396,833,907,2655,907,2657,1764,4533,822, 0,2412,3307,4230,6947,7870,10589,12415,16964, +,+,+,+,+,+,+,+,+, 622724 Satellite W-chromosome 585 chrUn_NT_465426v1 6850 8121 GGLTR7-int 608 + 6850 8121 0 2 338,465, 0,806, +,+, 622742 LTR ERV1 585 chrUn_NT_465426v1 8166 13975 GGERV10_LTR 872 - 8166 13975 0 2 38,41, 0,5768, -,-, 622744 LTR ERVL 585 chrUn_NT_465426v1 8334 13933 GGLTR10D-int 905 - 8334 13933 0 6 364,1471,382,2615,382,375, 0,367,1838,2223,4840,5224, -,-,-,-,-,-, 622745 LTR ERVK 585 chrUn_NT_465426v1 14241 16350 (CGAGG)n 559 + 14241 16350 0 6 467,149,12,25,202,579, 0,474,965,1130,1312,1530, +,+,+,+,+,+, 622748 Simple_repeat Simple_repeat 585 chrUn_NT_465426v1 17088 17696 (CGAGG)n 555 + 17088 17696 0 3 184,184,183, 0,216,425, +,+,+, 622756 Simple_repeat Simple_repeat 585 chrUn_NT_465427v1 5189 5845 GGLTR11 231 + 5189 5845 0 2 212,147, 0,509, +,+, 622760 LTR ERV1 585 chrUn_NT_465428v1 4993 5137 GA-rich 294 + 4993 5137 0 2 42,45, 0,99, +,+, 622773 Low_complexity Low_complexity 585 chrUn_NT_465428v1 7957 8102 GA-rich 300 + 7957 8102 0 2 43,45, 0,100, +,+, 622778 Low_complexity Low_complexity 585 chrUn_NT_465428v1 9433 9576 GA-rich 302 + 9433 9576 0 2 43,66, 0,77, +,+, 622782 Low_complexity Low_complexity 585 chrUn_NT_465428v1 10912 11057 GA-rich 300 + 10912 11057 0 2 43,45, 0,100, +,+, 622784 Low_complexity Low_complexity 585 chrUn_NT_465428v1 13880 14020 GA-rich 266 + 13880 14020 0 2 43,43, 0,97, +,+, 622791 Low_complexity Low_complexity 585 chrUn_NT_465428v1 15338 15477 GA-rich 266 + 15338 15477 0 2 43,63, 0,76, +,+, 622796 Low_complexity Low_complexity 585 chrUn_NT_465428v1 18353 18492 GA-rich 250 + 18353 18492 0 2 42,64, 0,75, +,+, 622803 Low_complexity Low_complexity 585 chrUn_NT_465429v1 750 1584 (CGAGG)n 509 + 750 1584 0 2 308,482, 0,352, +,+, 622808 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 1715 2087 (CGAGG)n 543 + 1715 2087 0 2 178,177, 0,195, +,+, 622810 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 3064 5662 (CGAGG)n 522 + 3064 5662 0 3 768,987,605, 0,822,1993, +,+,+, 622816 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 6182 7449 (CGAGG)n 557 + 6182 7449 0 4 312,234,490,182, 0,312,546,1085, +,+,+,+, 622821 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 7503 8356 (CGAGG)n 539 + 7503 8356 0 2 303,501, 0,352, +,+, 622823 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 9637 10022 (CCTCG)n 564 + 9637 10022 0 2 186,187, 0,198, +,+, 622830 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 10129 11886 (CCTCG)n 577 + 10129 11886 0 4 314,453,126,27, 0,327,793,1730, +,+,+,+, 622832 Simple_repeat Simple_repeat 585 chrUn_NT_465429v1 13940 16358 GGERV10_LTR 847 + 13940 16358 0 2 41,37, 0,2381, +,+, 622847 LTR ERVL 585 chrUn_NT_465429v1 13982 16193 GGLTR10D-int 924 + 13982 16193 0 2 1844,364, 0,1847, +,+, 622848 LTR ERVK 585 chrUn_NT_465429v1 16370 18576 GGLTR7-int 648 - 16370 18576 0 2 793,146, 0,2060, -,-, 622849 LTR ERV1 585 chrUn_NT_465432v1 8679 18469 Z-REP 610 - 8679 18469 0 2 9372,405, 0,9385, -,-, 622868 Satellite macro 585 chrUn_NT_465433v1 4864 6902 GGLTR7-int 641 + 4864 6902 0 3 1317,51,34, 0,1953,2004, +,+,+, 622871 LTR ERV1 585 chrUn_NT_465433v1 10896 11513 Z-REP 475 - 10896 11513 0 2 314,265, 0,352, -,-, 622876 Satellite macro 585 chrUn_NT_465433v1 14243 14373 CR1-Y 653 - 14243 14373 0 2 117,13, 0,117, -,-, 622880 LINE CR1 585 chrUn_NT_465434v1 2434 7832 GGXHOI 444 + 2434 7832 0 5 1351,283,651,263,2767, 0,1372,1675,2341,2631, +,+,+,+,+, 622887 Satellite W-chromosome 585 chrUn_NT_465434v1 14907 17734 GGXHOI 443 + 14907 17734 0 4 151,1420,699,456, 0,208,1655,2371, +,+,+,+, 622892 Satellite W-chromosome 585 chrUn_NT_465434v1 18191 18541 GGXHOI 339 + 18191 18541 0 2 141,197, 0,153, +,+, 622894 Satellite W-chromosome 585 chrUn_NT_465436v1 3067 4754 GGXHOI 369 + 3067 4754 0 2 596,1069, 0,618, +,+, 622901 Satellite W-chromosome 585 chrUn_NT_465436v1 5004 8829 GGXHOI 381 + 5004 8829 0 3 487,1521,1741, 0,516,2084, +,+,+, 622902 Satellite W-chromosome 585 chrUn_NT_465436v1 8916 13467 GGXHOI 387 + 8916 13467 0 4 164,1607,1765,884, 0,216,1885,3667, +,+,+,+, 622903 Satellite W-chromosome 585 chrUn_NT_465436v1 14380 18535 GGXHOI 387 + 14380 18535 0 6 688,799,878,128,587,933, 0,704,1524,2441,2614,3222, +,+,+,+,+,+, 622907 Satellite W-chromosome 585 chrUn_NT_465437v1 1595 1916 (AAATG)n 717 + 1595 1916 0 3 35,30,201, 0,60,120, +,+,+, 622913 Simple_repeat Simple_repeat 585 chrUn_NT_465437v1 4267 4362 (AAATG)n 905 + 4267 4362 0 2 44,26, 0,69, +,+, 622915 Simple_repeat Simple_repeat 585 chrUn_NT_465437v1 7703 10042 GGERV28_I-int 214 + 7703 10042 0 2 756,417, 0,1922, +,+, 622917 LTR ERVK 585 chrUn_NT_465437v1 11393 11587 (AAATG)n 752 + 11393 11587 0 2 142,27, 0,167, +,+, 622920 Simple_repeat Simple_repeat 585 chrUn_NT_465437v1 12216 15100 GGLTR7B 717 + 12216 15100 0 4 180,425,648,585, 0,1053,1478,2299, +,+,+,+, 622924 LTR ERV1 585 chrUn_NT_465437v1 15265 18531 GGERVL-B-int 883 - 15265 18531 0 2 1835,522, 0,2744, -,-, 622928 LTR ERVL 585 chrUn_NT_465438v1 3137 4331 GGERVL-A-int 797 - 3137 4331 0 2 433,401, 0,793, -,-, 622933 LTR ERVL 585 chrUn_NT_465438v1 4364 6739 CR1-H 789 - 4364 6739 0 3 414,70,611, 0,891,1764, -,-,-, 622934 LINE CR1 585 chrUn_NT_465438v1 7051 8902 GGERVL-A-int 887 + 7051 8902 0 3 1049,485,157, 0,1049,1694, +,+,+, 622939 LTR ERVL 585 chrUn_NT_465438v1 9078 18101 GGERVL-C-int 563 + 9078 18101 0 7 534,236,79,184,817,289,151, 0,534,846,965,2512,4069,8872, +,+,+,+,+,+,+, 622942 LTR ERVL 585 chrUn_NT_465438v1 10836 11411 GGERVL-C-int 810 + 10836 11411 0 3 241,161,173, 0,241,402, +,+,+, 622944 LTR ERVL 585 chrUn_NT_465438v1 13444 15255 GGERVL-B-int 756 - 13444 15255 0 2 1222,587, 0,1224, -,-, 622949 LTR ERVL 585 chrUn_NT_465438v1 15255 17592 GGERVL-A-int 732 + 15255 17592 0 2 263,238, 0,2099, +,+, 622950 LTR ERVL 585 chrUn_NT_465438v1 15516 17368 CR1-C 836 - 15516 17368 0 2 886,404, 0,1448, -,-, 622951 LINE CR1 585 chrUn_NT_465439v1 2072 3464 GGLTR7-int 311 + 2072 3464 0 3 100,314,280, 0,102,1112, +,+,+, 622957 LTR ERV1 585 chrUn_NT_465439v1 16940 17609 (CCTTG)n 584 + 16940 17609 0 3 145,23,61, 0,406,608, +,+,+, 622969 Simple_repeat Simple_repeat 585 chrUn_NT_465439v1 18083 18496 (GCCTG)n 346 + 18083 18496 0 3 175,20,103, 0,175,310, +,+,+, 622974 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 961 1988 (CGAGG)n 507 + 961 1988 0 2 504,503, 0,524, +,+, 622980 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 3195 4281 (CGAGG)n 534 + 3195 4281 0 2 443,639, 0,447, +,+, 622986 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 6143 6996 (CGAGG)n 548 + 6143 6996 0 3 140,32,495, 0,308,358, +,+,+, 622997 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 7787 10307 (CGAGG)n 546 + 7787 10307 0 5 499,551,297,30,726, 0,678,1254,1728,1794, +,+,+,+,+, 623003 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 10427 11627 (CGAGG)n 521 + 10427 11627 0 2 663,526, 0,674, +,+, 623007 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 14358 14772 (CGAGG)n 480 + 14358 14772 0 2 180,177, 0,237, +,+, 623021 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 14995 16250 (CGAGG)n 488 + 14995 16250 0 5 356,175,197,291,181, 0,369,562,772,1074, +,+,+,+,+, 623023 Simple_repeat Simple_repeat 585 chrUn_NT_465440v1 18461 18520 (CGAGG)n 462 + 18461 18520 0 2 13,16, 0,43, +,+, 623031 Simple_repeat Simple_repeat 585 chrUn_NT_465441v1 735 1119 Sat-CR1_GG 110 + 735 1119 0 2 75,138, 0,246, +,+, 623034 Satellite Satellite 585 chrUn_NT_465441v1 11961 12534 Sat-CR1_GG 188 + 11961 12534 0 2 153,159, 0,414, +,+, 623073 Satellite Satellite 585 chrUn_NT_465441v1 13391 13964 Sat-CR1_GG 188 + 13391 13964 0 2 153,159, 0,414, +,+, 623078 Satellite Satellite 585 chrUn_NT_465441v1 14822 15395 Sat-CR1_GG 188 + 14822 15395 0 2 230,178, 0,395, +,+, 623083 Satellite Satellite 585 chrUn_NT_465441v1 17679 18249 Sat-CR1_GG 184 + 17679 18249 0 2 229,176, 0,394, +,+, 623093 Satellite Satellite 585 chrUn_NT_465442v1 2259 3487 GGXHOI 340 - 2259 3487 0 2 915,271, 0,957, -,-, 623096 Satellite W-chromosome 585 chrUn_NT_465442v1 14438 17182 GGXHOI 356 - 14438 17182 0 3 1289,646,771, 0,1311,1973, -,-,-, 623106 Satellite W-chromosome 585 chrUn_NT_465443v1 5637 8109 GGLTR7-int 601 + 5637 8109 0 3 337,855,794, 0,815,1678, +,+,+, 623116 LTR ERV1 585 chrUn_NT_465443v1 8121 10541 GGERV10_LTR 874 - 8121 10541 0 2 38,41, 0,2379, -,-, 623118 LTR ERVL 585 chrUn_NT_465443v1 8291 10499 GGLTR10D-int 908 - 8291 10499 0 2 365,1840, 0,368, -,-, 623119 LTR ERVK 585 chrUn_NT_465443v1 11499 13304 (CGAGG)n 536 + 11499 13304 0 6 516,177,184,290,178,357, 0,527,715,915,1235,1448, +,+,+,+,+,+, 623122 Simple_repeat Simple_repeat 585 chrUn_NT_465443v1 14492 16016 (CGAGG)n 531 + 14492 16016 0 3 288,731,314, 0,464,1210, +,+,+, 623129 Simple_repeat Simple_repeat 585 chrUn_NT_465444v1 5467 8447 GGXHOI 390 + 5467 8447 0 4 655,476,752,1001, 0,667,1168,1979, +,+,+,+, 623139 Satellite W-chromosome 585 chrUn_NT_465444v1 8806 10382 GGXHOI 333 + 8806 10382 0 3 971,260,268, 0,1032,1308, +,+,+, 623141 Satellite W-chromosome 585 chrUn_NT_465444v1 10663 15901 GGXHOI 388 + 10663 15901 0 6 2127,227,566,164,323,1670, 0,2147,2397,3001,3183,3568, +,+,+,+,+,+, 623142 Satellite W-chromosome 585 chrUn_NT_465444v1 17309 18431 GGXHOI 416 + 17309 18431 0 4 551,224,145,147, 0,567,808,975, +,+,+,+, 623144 Satellite W-chromosome 585 chrUn_NT_465445v1 17583 18501 Z-REP 718 + 17583 18501 0 2 858,49, 0,869, +,+, 623157 Satellite macro 585 chrUn_NT_465446v1 1711 2345 G-rich 412 + 1711 2345 0 2 47,535, 0,99, +,+, 623159 Low_complexity Low_complexity 585 chrUn_NT_465447v1 720 1095 (CGAGG)n 515 + 720 1095 0 2 178,177, 0,198, +,+, 623173 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 4852 5584 (CGAGG)n 519 + 4852 5584 0 3 302,182,188, 0,332,544, +,+,+, 623184 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 7277 7962 (CGAGG)n 522 + 7277 7962 0 2 415,87, 0,598, +,+, 623191 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 8076 8537 (CGAGG)n 452 + 8076 8537 0 2 264,177, 0,284, +,+, 623193 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 8617 9352 (CGAGG)n 515 + 8617 9352 0 3 313,186,185, 0,334,550, +,+,+, 623194 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 11050 11368 (CGAGG)n 518 + 11050 11368 0 2 88,49, 0,269, +,+, 623202 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 12115 13177 (CGAGG)n 482 + 12115 13177 0 5 43,178,329,183,184, 0,69,301,660,878, +,+,+,+,+, 623209 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 15012 16788 (CGAGG)n 537 + 15012 16788 0 4 334,267,520,404, 0,518,798,1372, +,+,+,+, 623219 Simple_repeat Simple_repeat 585 chrUn_NT_465447v1 18086 18491 (CGAGG)n 481 + 18086 18491 0 2 176,204, 0,201, +,+, 623228 Simple_repeat Simple_repeat 585 chrUn_NT_465448v1 3708 4375 (GCCTG)n 490 + 3708 4375 0 2 414,76, 0,591, +,+, 623234 Simple_repeat Simple_repeat 585 chrUn_NT_465448v1 4366 4925 (CCTTG)n 588 + 4366 4925 0 2 293,79, 0,480, +,+, 623236 Simple_repeat Simple_repeat 585 chrUn_NT_465448v1 4921 5591 (GCCTG)n 497 + 4921 5591 0 2 446,209, 0,461, +,+, 623238 Simple_repeat Simple_repeat 585 chrUn_NT_465448v1 8602 11428 GGERVL-B-int 664 + 8602 11428 0 2 1919,907, 0,1919, +,+, 623245 LTR ERVL 585 chrUn_NT_465448v1 12156 13530 GGLTR7-int 264 + 12156 13530 0 3 96,307,279, 0,98,1095, +,+,+, 623247 LTR ERV1 585 chrUn_NT_465449v1 1402 3433 GGXHOI 383 - 1402 3433 0 3 519,178,1284, 0,537,747, -,-,-, 623250 Satellite W-chromosome 585 chrUn_NT_465449v1 3814 18486 GGXHOI 382 - 3814 18486 0 18 218,321,3712,469,210,258,213,140,1677,524,836,229,1094,1060,401,1103,968,775, 0,246,599,4367,4850,5081,5356,5627,5799,7490,8031,8885,9139,10255,11333,11785,12905,13897, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 623251 Satellite W-chromosome 585 chrUn_NT_465450v1 4457 7014 GGERVL-B-int 711 - 4457 7014 0 4 752,1067,64,311, 0,752,1820,2246, -,-,-,-, 623253 LTR ERVL 585 chrUn_NT_465450v1 9359 10390 GGLTR7A 736 - 9359 10390 0 2 578,452, 0,579, -,-, 623257 LTR ERV1 585 chrUn_NT_465450v1 10910 11336 GGLTR7A 861 - 10910 11336 0 2 251,175, 0,251, -,-, 623259 LTR ERV1 585 chrUn_NT_465450v1 11650 11964 (CAGGC)n 566 + 11650 11964 0 2 119,15, 0,299, +,+, 623262 Simple_repeat Simple_repeat 585 chrUn_NT_465450v1 11991 12613 (CAAGG)n 532 + 11991 12613 0 2 285,155, 0,467, +,+, 623264 Simple_repeat Simple_repeat 585 chrUn_NT_465450v1 12484 13083 (CAGGC)n 554 + 12484 13083 0 2 175,374, 0,225, +,+, 623266 Simple_repeat Simple_repeat 585 chrUn_NT_465450v1 14082 14471 (CAGGC)n 495 + 14082 14471 0 2 177,198, 0,191, +,+, 623273 Simple_repeat Simple_repeat 585 chrUn_NT_465450v1 14586 15107 (CAGGC)n 489 + 14586 15107 0 2 224,240, 0,281, +,+, 623276 Simple_repeat Simple_repeat 585 chrUn_NT_465450v1 15440 16453 (CAAGG)n 514 + 15440 16453 0 3 333,41,133, 0,649,880, +,+,+, 623281 Simple_repeat Simple_repeat 585 chrUn_NT_465451v1 1177 1821 G-rich 458 + 1177 1821 0 2 33,553, 0,91, +,+, 623289 Low_complexity Low_complexity 585 chrUn_NT_465451v1 1822 2161 GGERVL-C-int 538 + 1822 2161 0 2 106,211, 0,128, +,+, 623290 LTR ERVL 585 chrUn_NT_465452v1 2812 5698 GGXHOI 392 - 2812 5698 0 4 1126,607,442,623, 0,1145,1764,2263, -,-,-,-, 623303 Satellite W-chromosome 585 chrUn_NT_465452v1 7450 11471 GGXHOI 415 - 7450 11471 0 6 777,1417,525,611,370,165, 0,807,2239,2776,3432,3856, -,-,-,-,-,-, 623305 Satellite W-chromosome 585 chrUn_NT_465452v1 11556 13374 GGXHOI 400 - 11556 13374 0 4 529,434,446,318, 0,540,1009,1500, -,-,-,-, 623306 Satellite W-chromosome 585 chrUn_NT_465452v1 13494 18473 GGXHOI 409 - 13494 18473 0 13 409,137,492,369,157,346,146,469,200,178,347,840,586, 0,446,603,1146,1527,1696,2097,2261,2749,2979,3176,3538,4393, -,-,-,-,-,-,-,-,-,-,-,-,-, 623307 Satellite W-chromosome 585 chrUn_NT_465453v1 2710 4115 GGXHOI 352 + 2710 4115 0 2 845,543, 0,862, +,+, 623313 Satellite W-chromosome 585 chrUn_NT_465453v1 8565 9558 GGXHOI 350 + 8565 9558 0 2 315,646, 0,347, +,+, 623320 Satellite W-chromosome 585 chrUn_NT_465453v1 11629 13173 GGXHOI 387 + 11629 13173 0 2 472,1009, 0,535, +,+, 623323 Satellite W-chromosome 585 chrUn_NT_465453v1 14503 16618 GGXHOI 384 + 14503 16618 0 2 1046,1006, 0,1109, +,+, 623325 Satellite W-chromosome 585 chrUn_NT_465454v1 4038 5790 GGERVL-A-int 750 - 4038 5790 0 2 1295,457, 0,1295, -,-, 623333 LTR ERVL 585 chrUn_NT_465455v1 6556 12992 GGXHOI 398 - 6556 12992 0 4 4872,229,895,314, 0,4883,5167,6122, -,-,-,-, 623345 Satellite W-chromosome 585 chrUn_NT_465455v1 13279 16423 GGXHOI 394 - 13279 16423 0 2 2894,209, 0,2935, -,-, 623347 Satellite W-chromosome 585 chrUn_NT_465455v1 16553 18445 GGXHOI 408 - 16553 18445 0 2 1415,416, 0,1476, -,-, 623348 Satellite W-chromosome 585 chrUn_NT_465456v1 3081 3817 GGXHOI 361 + 3081 3817 0 2 271,447, 0,289, +,+, 623353 Satellite W-chromosome 585 chrUn_NT_465456v1 11162 11474 GGXHOI 306 + 11162 11474 0 2 102,175, 0,137, +,+, 623363 Satellite W-chromosome 585 chrUn_NT_465456v1 13165 13591 (CAAGG)n 435 + 13165 13591 0 2 209,200, 0,226, +,+, 623370 Simple_repeat Simple_repeat 585 chrUn_NT_465456v1 13669 14347 (CCTTG)n 433 + 13669 14347 0 2 290,343, 0,335, +,+, 623371 Simple_repeat Simple_repeat 585 chrUn_NT_465456v1 15307 16189 (CAAGG)n 485 + 15307 16189 0 3 229,374,260, 0,231,622, +,+,+, 623375 Simple_repeat Simple_repeat 585 chrUn_NT_465456v1 16277 16536 (CCTTG)n 441 + 16277 16536 0 2 181,24, 0,235, +,+, 623376 Simple_repeat Simple_repeat 585 chrUn_NT_465456v1 16589 16941 (CCTTG)n 418 + 16589 16941 0 2 115,62, 0,290, +,+, 623378 Simple_repeat Simple_repeat 585 chrUn_NT_465456v1 18183 18459 (CAAGG)n 455 + 18183 18459 0 2 192,73, 0,203, +,+, 623382 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 1493 2029 (CAAGG)n 590 + 1493 2029 0 3 46,226,242, 0,46,294, +,+,+, 623390 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 3206 3810 (CCTTG)n 547 + 3206 3810 0 2 225,353, 0,251, +,+, 623395 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 4441 4910 (CAAGG)n 595 + 4441 4910 0 3 46,223,174, 0,46,295, +,+,+, 623401 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 5538 5857 (GCCTG)n 400 + 5538 5857 0 2 98,43, 0,276, +,+, 623405 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 6235 6772 (CAAGG)n 591 + 6235 6772 0 3 46,223,242, 0,46,295, +,+,+, 623409 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 7949 8836 (CCTTG)n 515 + 7949 8836 0 4 225,114,76,169, 0,251,625,718, +,+,+,+, 623413 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 9192 9661 (CAAGG)n 595 + 9192 9661 0 3 46,223,174, 0,46,295, +,+,+, 623418 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 10289 10608 (GCCTG)n 400 + 10289 10608 0 2 98,43, 0,276, +,+, 623422 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 10986 11523 (CAAGG)n 591 + 10986 11523 0 3 46,223,242, 0,46,295, +,+,+, 623426 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 12699 13303 (CCTTG)n 547 + 12699 13303 0 2 225,353, 0,251, +,+, 623430 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 13943 14410 (CAAGG)n 599 + 13943 14410 0 3 45,223,173, 0,45,294, +,+,+, 623437 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 14727 15238 (CCTTG)n 471 + 14727 15238 0 2 328,172, 0,339, +,+, 623439 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 15594 16000 (CAAGG)n 492 + 15594 16000 0 2 216,177, 0,229, +,+, 623441 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 16380 17114 (CAAGG)n 506 + 16380 17114 0 2 223,485, 0,249, +,+, 623445 Simple_repeat Simple_repeat 585 chrUn_NT_465457v1 17294 18172 (CCTTG)n 495 + 17294 18172 0 4 225,187,76,164, 0,248,621,714, +,+,+,+, 623447 Simple_repeat Simple_repeat 585 chrUn_NT_465458v1 12249 14418 GGLTR7-int 632 + 12249 14418 0 2 338,526, 0,1643, +,+, 623465 LTR ERV1 585 chrUn_NT_465458v1 14430 16620 GGLTR10D-int 945 - 14430 16620 0 2 343,1844, 0,346, -,-, 623468 LTR ERVK 585 chrUn_NT_465458v1 17589 18444 (CGAGG)n 625 + 17589 18444 0 4 178,220,242,176, 0,199,419,679, +,+,+,+, 623476 Simple_repeat Simple_repeat 585 chrUn_NT_465459v1 342 6183 GGERVL-B-int 893 - 342 6183 0 3 5310,494,36, 0,5311,5805, -,-,-, 623478 LTR ERVL 585 chrUn_NT_465459v1 6183 12032 GGERVL-B-int 896 - 6183 12032 0 3 5319,493,36, 0,5320,5813, -,-,-, 623479 LTR ERVL 585 chrUn_NT_465459v1 12032 18411 GGERVL-B-int 881 - 12032 18411 0 3 5315,494,569, 0,5316,5810, -,-,-, 623480 LTR ERVL 585 chrUn_NT_465460v1 668 2060 GGXHOI 400 - 668 2060 0 3 228,601,505, 0,240,887, -,-,-, 623483 Satellite W-chromosome 585 chrUn_NT_465460v1 2275 5113 GGXHOI 387 - 2275 5113 0 7 459,718,72,476,235,230,399, 0,490,1219,1318,1849,2147,2439, -,-,-,-,-,-,-, 623484 Satellite W-chromosome 585 chrUn_NT_465460v1 6998 10537 GGXHOI 405 - 6998 10537 0 5 833,1419,528,392,226, 0,880,2346,2901,3313, -,-,-,-,-, 623491 Satellite W-chromosome 585 chrUn_NT_465460v1 10638 12083 GGXHOI 402 - 10638 12083 0 4 415,235,230,399, 0,456,754,1046, -,-,-,-, 623492 Satellite W-chromosome 585 chrUn_NT_465460v1 13939 16829 GGXHOI 402 - 13939 16829 0 2 1789,1083, 0,1807, -,-, 623497 Satellite W-chromosome 585 chrUn_NT_465462v1 5058 7191 GGXHOI 398 - 5058 7191 0 2 1116,997, 0,1136, -,-, 623507 Satellite W-chromosome 585 chrUn_NT_465462v1 8496 11742 GGXHOI 394 - 8496 11742 0 4 493,604,1867,225, 0,509,1138,3021, -,-,-,-, 623511 Satellite W-chromosome 585 chrUn_NT_465462v1 11770 14937 GGXHOI 378 - 11770 14937 0 3 1890,1126,119, 0,1908,3048, -,-,-, 623513 Satellite W-chromosome 585 chrUn_NT_465462v1 17116 18417 GGXHOI 381 - 17116 18417 0 2 1084,191, 0,1110, -,-, 623518 Satellite W-chromosome 585 chrUn_NT_465463v1 11581 12706 CR1-B2 706 - 11581 12706 0 2 897,225, 0,900, -,-, 623529 LINE CR1 585 chrUn_NT_465464v1 287 1633 (GAGTG)n 450 + 287 1633 0 5 208,433,184,181,189, 0,229,693,929,1157, +,+,+,+,+, 623538 Simple_repeat Simple_repeat 585 chrUn_NT_465464v1 1633 3723 GGERVL18-int 527 + 1633 3723 0 3 238,1029,823, 0,238,1267, +,+,+, 623539 LTR ERVL 585 chrUn_NT_465464v1 10677 14308 GGERV28_I-int 221 + 10677 14308 0 3 101,376,1989, 0,951,1642, +,+,+, 623550 LTR ERVK 585 chrUn_NT_465464v1 14545 15404 GGLTR7A 774 + 14545 15404 0 4 42,186,259,350, 0,42,250,509, +,+,+,+, 623551 LTR ERV1 585 chrUn_NT_465465v1 571 992 GGLTR7A 868 + 571 992 0 2 170,251, 0,170, +,+, 623564 LTR ERV1 585 chrUn_NT_465465v1 1515 2582 GGLTR7A 830 + 1515 2582 0 2 463,604, 0,463, +,+, 623566 LTR ERV1 585 chrUn_NT_465465v1 4882 7849 GGERVL-B-int 689 + 4882 7849 0 2 299,2323, 0,644, +,+, 623569 LTR ERVL 585 chrUn_NT_465465v1 8576 9963 GGLTR7-int 284 + 8576 9963 0 3 101,309,278, 0,103,1109, +,+,+, 623572 LTR ERV1 585 chrUn_NT_465466v1 3140 3668 Sat-CR1_GG 158 - 3140 3668 0 2 106,162, 0,366, -,-, 623595 Satellite Satellite 585 chrUn_NT_465466v1 8595 9127 Sat-CR1_GG 172 + 8595 9127 0 2 164,106, 0,426, +,+, 623615 Satellite Satellite 585 chrUn_NT_465466v1 11737 12270 Sat-CR1_GG 182 - 11737 12270 0 2 106,168, 0,365, -,-, 623628 Satellite Satellite 585 chrUn_NT_465466v1 16037 16568 Sat-CR1_GG 170 - 16037 16568 0 2 106,164, 0,367, -,-, 623645 Satellite Satellite 585 chrUn_NT_465466v1 17201 17775 Sat-CR1_GG 130 + 17201 17775 0 2 164,153, 0,421, +,+, 623650 Satellite Satellite 585 chrUn_NT_465467v1 9580 9879 GGLTR3E1 754 - 9580 9879 0 2 138,161, 0,138, -,-, 623662 LTR ERVL 585 chrUn_NT_465468v1 251 1705 Sat-CR1_GG 254 + 251 1705 0 2 185,245, 0,1209, +,+, 623673 Satellite Satellite 585 chrUn_NT_465469v1 11255 15419 CR1-D 385 + 11255 15419 0 4 62,12,1000,1638, 0,514,1526,2526, +,+,+,+, 623714 LINE CR1 585 chrUn_NT_465470v1 1168 3358 GGXHOI 378 + 1168 3358 0 2 1043,1084, 0,1106, +,+, 623721 Satellite W-chromosome 585 chrUn_NT_465470v1 6197 7189 GGXHOI 325 + 6197 7189 0 2 504,431, 0,561, +,+, 623726 Satellite W-chromosome 585 chrUn_NT_465470v1 7969 9469 GGXHOI 342 + 7969 9469 0 3 324,855,279, 0,341,1221, +,+,+, 623728 Satellite W-chromosome 585 chrUn_NT_465470v1 14820 15838 GGXHOI 367 + 14820 15838 0 3 467,303,137, 0,529,881, +,+,+, 623737 Satellite W-chromosome 585 chrUn_NT_465470v1 16001 17185 GGXHOI 352 + 16001 17185 0 2 384,737, 0,447, +,+, 623738 Satellite W-chromosome 585 chrUn_NT_465471v1 561 1965 GGXHOI 347 + 561 1965 0 3 945,144,273, 0,970,1131, +,+,+, 623742 Satellite W-chromosome 585 chrUn_NT_465471v1 2152 5039 GGXHOI 390 + 2152 5039 0 4 411,1145,1142,129, 0,431,1596,2758, +,+,+,+, 623743 Satellite W-chromosome 585 chrUn_NT_465471v1 5236 7872 GGXHOI 409 + 5236 7872 0 3 326,1134,1136, 0,346,1500, +,+,+, 623746 Satellite W-chromosome 585 chrUn_NT_465471v1 8162 14902 GGXHOI 421 + 8162 14902 0 7 320,1064,1142,146,1068,2419,478, 0,340,1419,2576,2735,3823,6262, +,+,+,+,+,+,+, 623747 Satellite W-chromosome 585 chrUn_NT_465471v1 16396 17540 GGXHOI 386 - 16396 17540 0 2 799,330, 0,814, -,-, 623750 Satellite W-chromosome 585 chrUn_NT_465471v1 17703 18326 GGXHOI 420 - 17703 18326 0 2 466,143, 0,480, -,-, 623751 Satellite W-chromosome 585 chrUn_NT_465472v1 12309 12480 GA-rich 360 + 12309 12480 0 2 57,84, 0,87, +,+, 623757 Low_complexity Low_complexity 585 chrUn_NT_465473v1 2430 5977 GGXHOI 372 + 2430 5977 0 3 385,2035,1001, 0,448,2546, +,+,+, 623764 Satellite W-chromosome 585 chrUn_NT_465473v1 6074 7828 GGXHOI 364 + 6074 7828 0 2 942,760, 0,994, +,+, 623765 Satellite W-chromosome 585 chrUn_NT_465473v1 8579 10762 GGXHOI 374 + 8579 10762 0 3 462,1083,514, 0,524,1669, +,+,+, 623767 Satellite W-chromosome 585 chrUn_NT_465473v1 11433 13618 GGXHOI 380 + 11433 13618 0 2 1044,1080, 0,1105, +,+, 623769 Satellite W-chromosome 585 chrUn_NT_465473v1 15435 16486 GGXHOI 392 + 15435 16486 0 2 472,516, 0,535, +,+, 623773 Satellite W-chromosome 585 chrUn_NT_465473v1 16585 17631 GGXHOI 390 + 16585 17631 0 2 472,514, 0,532, +,+, 623774 Satellite W-chromosome 585 chrUn_NT_465474v1 337 3010 GGERV28_I-int 178 - 337 3010 0 2 1981,376, 0,2297, -,-, 623778 LTR ERVK 585 chrUn_NT_465474v1 5360 6236 GGXHOI 357 + 5360 6236 0 2 266,589, 0,287, +,+, 623779 Satellite W-chromosome 585 chrUn_NT_465474v1 6357 8587 GGXHOI 365 + 6357 8587 0 4 342,553,637,634, 0,364,938,1596, +,+,+,+, 623780 Satellite W-chromosome 585 chrUn_NT_465474v1 8853 9779 GGXHOI 387 + 8853 9779 0 2 599,310, 0,616, +,+, 623781 Satellite W-chromosome 585 chrUn_NT_465474v1 10041 11539 GGXHOI 350 + 10041 11539 0 4 631,267,271,270, 0,652,940,1228, +,+,+,+, 623782 Satellite W-chromosome 585 chrUn_NT_465474v1 12975 13627 GGXHOI 348 + 12975 13627 0 2 368,268, 0,384, +,+, 623785 Satellite W-chromosome 585 chrUn_NT_465474v1 13726 14279 GGXHOI 372 + 13726 14279 0 2 268,267, 0,286, +,+, 623786 Satellite W-chromosome 585 chrUn_NT_465475v1 4455 7708 GGLTR7A 844 - 4455 7708 0 2 588,2656, 0,597, -,-, 623797 LTR ERV1 585 chrUn_NT_465475v1 7706 8391 GGLTR7A 807 + 7706 8391 0 2 88,589, 0,96, +,+, 623798 LTR ERV1 585 chrUn_NT_465475v1 10279 12984 GGERVL-B-int 672 + 10279 12984 0 2 1792,913, 0,1792, +,+, 623801 LTR ERVL 585 chrUn_NT_465475v1 13721 15117 GGLTR7-int 359 + 13721 15117 0 3 101,210,280, 0,127,1116, +,+,+, 623803 LTR ERV1 585 chrUn_NT_465476v1 15632 16256 GGXHOI 463 + 15632 16256 0 2 187,412, 0,212, +,+, 623819 Satellite W-chromosome 585 chrUn_NT_465476v1 16327 16723 GGXHOI 439 + 16327 16723 0 2 145,206, 0,190, +,+, 623820 Satellite W-chromosome 585 chrUn_NT_465476v1 17276 17949 GGXHOI 435 + 17276 17949 0 2 139,519, 0,154, +,+, 623822 Satellite W-chromosome 585 chrUn_NT_465477v1 1621 2163 GGXHOI 379 + 1621 2163 0 2 212,299, 0,243, +,+, 623826 Satellite W-chromosome 585 chrUn_NT_465477v1 3485 5096 GGXHOI 382 + 3485 5096 0 2 1036,512, 0,1099, +,+, 623828 Satellite W-chromosome 585 chrUn_NT_465477v1 6479 8461 GGXHOI 389 + 6479 8461 0 2 961,966, 0,1016, +,+, 623832 Satellite W-chromosome 585 chrUn_NT_465477v1 10305 11845 GGXHOI 378 + 10305 11845 0 2 472,1005, 0,535, +,+, 623836 Satellite W-chromosome 585 chrUn_NT_465477v1 14270 16427 GGXHOI 379 + 14270 16427 0 2 1085,1009, 0,1148, +,+, 623841 Satellite W-chromosome 585 chrUn_NT_465479v1 698 3014 GGXHOI 369 - 698 3014 0 2 1578,676, 0,1640, -,-, 623902 Satellite W-chromosome 585 chrUn_NT_465479v1 3113 8749 GGXHOI 381 - 3113 8749 0 4 583,641,1379,2937, 0,605,1262,2699, -,-,-,-, 623903 Satellite W-chromosome 585 chrUn_NT_465479v1 8929 11645 GGXHOI 379 - 8929 11645 0 2 1197,1472, 0,1244, -,-, 623904 Satellite W-chromosome 585 chrUn_NT_465480v1 634 1777 GGXHOI 338 + 634 1777 0 2 133,996, 0,147, +,+, 623914 Satellite W-chromosome 585 chrUn_NT_465480v1 2516 4433 GGXHOI 408 + 2516 4433 0 2 197,1684, 0,233, +,+, 623917 Satellite W-chromosome 585 chrUn_NT_465480v1 4466 5642 GGXHOI 366 + 4466 5642 0 2 422,732, 0,444, +,+, 623919 Satellite W-chromosome 585 chrUn_NT_465480v1 5730 7559 GGXHOI 401 + 5730 7559 0 3 625,413,732, 0,662,1097, +,+,+, 623920 Satellite W-chromosome 585 chrUn_NT_465480v1 7647 9477 GGXHOI 399 + 7647 9477 0 3 625,414,732, 0,662,1098, +,+,+, 623922 Satellite W-chromosome 585 chrUn_NT_465480v1 9565 11394 GGXHOI 395 + 9565 11394 0 3 625,417,732, 0,658,1097, +,+,+, 623924 Satellite W-chromosome 585 chrUn_NT_465480v1 11482 13309 GGXHOI 395 + 11482 13309 0 3 625,415,732, 0,658,1095, +,+,+, 623926 Satellite W-chromosome 585 chrUn_NT_465481v1 5328 6583 GGLTR7-int 313 - 5328 6583 0 2 281,213, 0,1042, -,-, 623938 LTR ERV1 585 chrUn_NT_465481v1 7449 10226 GGERVL-B-int 682 - 7449 10226 0 2 938,1770, 0,1007, -,-, 623940 LTR ERVL 585 chrUn_NT_465481v1 12285 12668 (CAAGG)n 577 + 12285 12668 0 2 182,201, 0,182, +,+, 623944 Simple_repeat Simple_repeat 585 chrUn_NT_465481v1 13143 14070 (CAGGC)n 525 + 13143 14070 0 4 214,56,215,264, 0,392,448,663, +,+,+,+, 623950 Simple_repeat Simple_repeat 585 chrUn_NT_465481v1 14098 14517 (CAGGC)n 516 + 14098 14517 0 2 85,157, 0,262, +,+, 623953 Simple_repeat Simple_repeat 585 chrUn_NT_465481v1 14600 15279 (CAGGC)n 558 + 14600 15279 0 2 170,331, 0,348, +,+, 623956 Simple_repeat Simple_repeat 585 chrUn_NT_465481v1 16814 17213 (CCCTT)n 190 + 16814 17213 0 2 36,6, 0,393, +,+, 623960 Simple_repeat Simple_repeat 585 chrUn_NT_465482v1 2151 2483 GGXHOI 388 - 2151 2483 0 2 135,154, 0,178, -,-, 623964 Satellite W-chromosome 585 chrUn_NT_465483v1 917 1821 GGXHOI 347 - 917 1821 0 2 354,502, 0,402, -,-, 623977 Satellite W-chromosome 585 chrUn_NT_465483v1 1934 3139 GGXHOI 383 - 1934 3139 0 3 359,521,290, 0,379,915, -,-,-, 623978 Satellite W-chromosome 585 chrUn_NT_465483v1 3226 4179 GGXHOI 394 - 3226 4179 0 2 439,455, 0,498, -,-, 623979 Satellite W-chromosome 585 chrUn_NT_465483v1 4346 5699 GGXHOI 404 - 4346 5699 0 4 360,436,101,356, 0,380,871,997, -,-,-,-, 623980 Satellite W-chromosome 585 chrUn_NT_465483v1 6174 7146 GGXHOI 370 - 6174 7146 0 2 516,400, 0,572, -,-, 623982 Satellite W-chromosome 585 chrUn_NT_465483v1 8124 9976 GGXHOI 396 - 8124 9976 0 5 440,423,107,410,291, 0,499,965,1110,1561, -,-,-,-,-, 623985 Satellite W-chromosome 585 chrUn_NT_465483v1 10709 12005 GGXHOI 386 - 10709 12005 0 2 443,838, 0,458, -,-, 623987 Satellite W-chromosome 585 chrUn_NT_465483v1 12092 13572 GGXHOI 392 - 12092 13572 0 4 440,454,108,361, 0,499,996,1119, -,-,-,-, 623988 Satellite W-chromosome 585 chrUn_NT_465483v1 15483 16583 GGXHOI 377 - 15483 16583 0 3 358,455,246, 0,378,854, -,-,-, 623993 Satellite W-chromosome 585 chrUn_NT_465483v1 16795 17954 GGXHOI 390 - 16795 17954 0 3 404,392,319, 0,424,840, -,-,-, 623994 Satellite W-chromosome 585 chrUn_NT_465484v1 10473 15205 CR1-D2 544 - 10473 15205 0 2 570,829, 0,3903, -,-, 624003 LINE CR1 585 chrUn_NT_465484v1 11727 14390 CR1-D 620 - 11727 14390 0 3 1678,873,112, 0,1678,2551, -,-,-, 624004 LINE CR1 585 chrUn_NT_465484v1 15204 15445 Char12Mar1_GG 509 - 15204 15445 0 2 69,172, 0,69, -,-, 624005 DNA hAT-Charlie 585 chrUn_NT_465485v1 4543 4904 GGERVK10-int 243 + 4543 4904 0 2 140,82, 0,279, +,+, 624011 LTR ERVK 585 chrUn_NT_465486v1 14253 14346 CR1-E 632 - 14253 14346 0 2 49,44, 0,49, -,-, 624037 LINE CR1 585 chrUn_NT_465487v1 112 2589 GGXHOI 367 - 112 2589 0 4 249,226,128,1812, 0,260,522,665, -,-,-,-, 624046 Satellite W-chromosome 585 chrUn_NT_465487v1 4337 12191 GGXHOI 404 - 4337 12191 0 7 1636,795,815,970,2725,396,307, 0,1659,2509,3340,4326,7109,7547, -,-,-,-,-,-,-, 624049 Satellite W-chromosome 585 chrUn_NT_465487v1 12260 18304 GGXHOI 355 - 12260 18304 0 6 103,377,619,4314,194,234, 0,151,552,1189,5566,5810, -,-,-,-,-,-, 624050 Satellite W-chromosome 585 chrUn_NT_465488v1 16148 16266 (TCCC)n 294 + 16148 16266 0 2 7,12, 0,106, +,+, 624080 Simple_repeat Simple_repeat 585 chrUn_NT_465489v1 1818 12509 GGXHOI 381 - 1818 12509 0 4 5794,107,673,4069, 0,5809,5932,6622, -,-,-,-, 624087 Satellite W-chromosome 585 chrUn_NT_465489v1 12625 18307 GGXHOI 359 - 12625 18307 0 3 2392,469,2779, 0,2415,2903, -,-,-, 624088 Satellite W-chromosome 585 chrUn_NT_465490v1 756 15445 GGXHOI 546 - 756 15445 0 25 252,247,194,247,194,297,194,247,194,297,194,247,194,297,194,247,194,297,194,247,194,297,194,240,107, 0,698,1268,1909,2479,3070,3690,4331,4901,5492,6112,6753,7323,7914,8534,9175,9745,10336,10956,11597,12167,12758,13378,14021,14582, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 624092 Satellite W-chromosome 585 chrUn_NT_465490v1 16898 18299 GGXHOI 526 - 16898 18299 0 3 289,191,160, 0,609,1241, -,-,-, 624121 Satellite W-chromosome 585 chrUn_NT_465491v1 1436 11578 GGLTR3B1 580 + 1436 11578 0 5 523,62,4384,433,82, 0,523,5204,9588,10060, +,+,+,+,+, 624125 LTR ERVL 585 chrUn_NT_465491v1 2051 5149 GGLTR7-int 784 - 2051 5149 0 3 53,2101,589, 0,408,2509, -,-,-, 624126 LTR ERV1 585 chrUn_NT_465492v1 5357 6148 CR1-F 266 + 5357 6148 0 2 218,573, 0,218, +,+, 624141 LINE CR1 585 chrUn_NT_465494v1 1169 14940 GGXHOI 426 - 1169 14940 0 17 1880,917,519,940,64,883,514,1371,64,883,1083,1418,64,976,1344,64,288, 0,1943,2884,3418,4378,4499,5394,5923,7330,7451,8354,9448,10886,11007,11998,13362,13483, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 624169 Satellite W-chromosome 585 chrUn_NT_465494v1 15100 17397 GGXHOI 375 - 15100 17397 0 4 457,433,1010,308, 0,469,921,1989, -,-,-,-, 624170 Satellite W-chromosome 585 chrUn_NT_465494v1 17548 18285 GGXHOI 379 - 17548 18285 0 2 472,250, 0,487, -,-, 624171 Satellite W-chromosome 585 chrUn_NT_465496v1 6041 9308 CR1-C2 702 - 6041 9308 0 2 105,295, 0,2972, -,-, 624176 LINE CR1 585 chrUn_NT_465496v1 13527 15564 CR1-C2 629 - 13527 15564 0 2 103,283, 0,1754, -,-, 624180 LINE CR1 585 chrUn_NT_465497v1 4038 8419 GGXHOI 378 - 4038 8419 0 3 2080,1088,1088, 0,2143,3293, -,-,-, 624187 Satellite W-chromosome 585 chrUn_NT_465498v1 262 1096 (GCGAG)n 266 + 262 1096 0 2 225,499, 0,335, +,+, 624204 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 1916 2507 (CGAGG)n 475 + 1916 2507 0 2 375,170, 0,421, +,+, 624208 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 4074 4866 (CGAGG)n 521 + 4074 4866 0 2 586,182, 0,610, +,+, 624214 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 4960 5631 (CGAGG)n 549 + 4960 5631 0 2 466,175, 0,496, +,+, 624215 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 9324 9950 (CGAGG)n 526 + 9324 9950 0 2 436,179, 0,447, +,+, 624228 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 10388 10756 (CGAGG)n 519 + 10388 10756 0 2 177,175, 0,193, +,+, 624232 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 11596 12507 (CGAGG)n 568 + 11596 12507 0 3 178,453,85, 0,190,826, +,+,+, 624235 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 12574 14324 (CGAGG)n 452 + 12574 14324 0 2 1198,551, 0,1199, +,+, 624238 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 14739 15250 (CGAGG)n 481 + 14739 15250 0 2 185,315, 0,196, +,+, 624242 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 17274 17894 (CGAGG)n 609 + 17274 17894 0 2 184,425, 0,195, +,+, 624248 Simple_repeat Simple_repeat 585 chrUn_NT_465498v1 17896 18269 (CCTCG)n 510 + 17896 18269 0 2 182,180, 0,193, +,+, 624249 Simple_repeat Simple_repeat 585 chrUn_NT_465499v1 9080 10202 CR1-B2 682 + 9080 10202 0 2 225,894, 0,228, +,+, 624254 LINE CR1 585 chrUn_NT_465500v1 1027 1650 CR1-H 372 - 1027 1650 0 2 379,208, 0,415, -,-, 624269 LINE CR1 585 chrUn_NT_465500v1 3530 4154 CR1-H 378 - 3530 4154 0 2 379,209, 0,415, -,-, 624272 LINE CR1 585 chrUn_NT_465500v1 6035 6659 CR1-H 378 - 6035 6659 0 2 379,209, 0,415, -,-, 624275 LINE CR1 585 chrUn_NT_465500v1 8540 9162 CR1-H 387 - 8540 9162 0 2 378,208, 0,414, -,-, 624278 LINE CR1 585 chrUn_NT_465500v1 11041 11665 CR1-H 378 - 11041 11665 0 2 379,209, 0,415, -,-, 624281 LINE CR1 585 chrUn_NT_465500v1 13542 14164 CR1-H 372 - 13542 14164 0 2 379,208, 0,414, -,-, 624284 LINE CR1 585 chrUn_NT_465500v1 16041 16658 CR1-H 373 - 16041 16658 0 2 378,204, 0,413, -,-, 624287 LINE CR1 585 chrUn_NT_465501v1 11430 12571 CR1-D 733 - 11430 12571 0 2 793,328, 0,813, -,-, 624295 LINE CR1 585 chrUn_NT_465504v1 2476 3599 CR1-B2 706 - 2476 3599 0 2 895,225, 0,898, -,-, 624311 LINE CR1 585 chrUn_NT_465504v1 13504 15266 CR1-X 387 - 13504 15266 0 4 269,124,171,110, 0,269,393,1652, -,-,-,-, 624317 LINE CR1 585 chrUn_NT_465505v1 16133 16588 CR1-H 641 + 16133 16588 0 2 295,160, 0,295, +,+, 624335 LINE CR1 585 chrUn_NT_465506v1 3086 4702 Z-REP 877 + 3086 4702 0 2 295,1307, 0,309, +,+, 624343 Satellite macro 585 chrUn_NT_465507v1 1293 3964 Sat-CR1_GG 208 - 1293 3964 0 3 578,911,699, 0,723,1972, -,-,-, 624353 Satellite Satellite 585 chrUn_NT_465507v1 4102 5942 Sat-CR1_GG 214 - 4102 5942 0 2 802,700, 0,1140, -,-, 624357 Satellite Satellite 585 chrUn_NT_465507v1 6080 7920 Sat-CR1_GG 214 - 6080 7920 0 2 802,700, 0,1140, -,-, 624360 Satellite Satellite 585 chrUn_NT_465507v1 8058 9900 Sat-CR1_GG 216 - 8058 9900 0 2 803,701, 0,1141, -,-, 624363 Satellite Satellite 585 chrUn_NT_465507v1 10038 13848 Sat-CR1_GG 208 - 10038 13848 0 5 802,699,286,481,694, 0,1140,1852,2297,3116, -,-,-,-,-, 624366 Satellite Satellite 585 chrUn_NT_465508v1 990 3999 GGXHOI 407 - 990 3999 0 2 1508,1486, 0,1523, -,-, 624379 Satellite W-chromosome 585 chrUn_NT_465508v1 4196 5400 GGXHOI 385 - 4196 5400 0 2 540,649, 0,555, -,-, 624380 Satellite W-chromosome 585 chrUn_NT_465508v1 5738 9654 GGXHOI 402 - 5738 9654 0 4 538,1276,734,1247, 0,596,1893,2669, -,-,-,-, 624382 Satellite W-chromosome 585 chrUn_NT_465508v1 9750 12132 GGXHOI 381 - 9750 12132 0 2 1540,789, 0,1593, -,-, 624383 Satellite W-chromosome 585 chrUn_NT_465508v1 12784 13319 GGXHOI 318 - 12784 13319 0 2 252,258, 0,277, -,-, 624385 Satellite W-chromosome 585 chrUn_NT_465508v1 13560 16229 GGXHOI 405 - 13560 16229 0 2 496,2115, 0,554, -,-, 624386 Satellite W-chromosome 585 chrUn_NT_465509v1 2245 5451 GGXHOI 393 - 2245 5451 0 2 1452,1708, 0,1498, -,-, 624389 Satellite W-chromosome 585 chrUn_NT_465509v1 5832 7017 GGXHOI 415 - 5832 7017 0 2 1015,148, 0,1037, -,-, 624391 Satellite W-chromosome 585 chrUn_NT_465509v1 8946 12306 GGXHOI 376 - 8946 12306 0 3 1165,134,1988, 0,1217,1372, -,-,-, 624396 Satellite W-chromosome 585 chrUn_NT_465509v1 12476 14126 GGXHOI 363 - 12476 14126 0 2 138,1463, 0,187, -,-, 624397 Satellite W-chromosome 585 chrUn_NT_465509v1 15170 18194 GGXHOI 386 - 15170 18194 0 5 1351,1029,149,263,131, 0,1376,2422,2586,2893, -,-,-,-,-, 624399 Satellite W-chromosome 585 chrUn_NT_465510v1 292 1278 (CAAGG)n 489 + 292 1278 0 3 371,212,376, 0,371,610, +,+,+, 624401 Simple_repeat Simple_repeat 585 chrUn_NT_465510v1 1447 2467 (CCTTG)n 497 + 1447 2467 0 3 198,543,223, 0,226,797, +,+,+, 624403 Simple_repeat Simple_repeat 585 chrUn_NT_465510v1 2997 4543 GGXHOI 378 - 2997 4543 0 2 1011,472, 0,1074, -,-, 624405 Satellite W-chromosome 585 chrUn_NT_465510v1 4642 5693 GGXHOI 378 - 4642 5693 0 2 516,472, 0,579, -,-, 624406 Satellite W-chromosome 585 chrUn_NT_465510v1 8052 8537 GGXHOI 380 - 8052 8537 0 2 205,224, 0,261, -,-, 624411 Satellite W-chromosome 585 chrUn_NT_465510v1 13700 14627 GGXHOI 377 - 13700 14627 0 2 516,393, 0,534, -,-, 624417 Satellite W-chromosome 585 chrUn_NT_465510v1 14726 16345 GGXHOI 382 - 14726 16345 0 2 514,1042, 0,577, -,-, 624418 Satellite W-chromosome 585 chrUn_NT_465511v1 7461 8091 CR1-C 704 - 7461 8091 0 2 65,565, 0,65, -,-, 624429 LINE CR1 585 chrUn_NT_465511v1 11094 12363 CR1-H 586 + 11094 12363 0 2 1158,111, 0,1158, +,+, 624433 LINE CR1 585 chrUn_NT_465511v1 14356 14982 CR1-H 690 + 14356 14982 0 2 468,139, 0,487, +,+, 624436 LINE CR1 585 chrUn_NT_465512v1 12436 16127 GGXHOI 405 - 12436 16127 0 4 306,513,432,2382, 0,325,855,1309, -,-,-,-, 624450 Satellite W-chromosome 585 chrUn_NT_465512v1 16207 17614 GGXHOI 395 - 16207 17614 0 3 220,218,936, 0,235,471, -,-,-, 624451 Satellite W-chromosome 585 chrUn_NT_465513v1 11946 12517 CR1-X 445 - 11946 12517 0 3 225,133,171, 0,267,400, -,-,-, 624461 LINE CR1 585 chrUn_NT_465513v1 17516 18220 CR1-B2 679 + 17516 18220 0 2 223,478, 0,226, +,+, 624463 LINE CR1 585 chrUn_NT_465515v1 12472 12601 GA-rich 338 + 12472 12601 0 2 41,32, 0,97, +,+, 624496 Low_complexity Low_complexity 585 chrUn_NT_465515v1 17174 17304 GA-rich 376 + 17174 17304 0 2 42,32, 0,98, +,+, 624509 Low_complexity Low_complexity 585 chrUn_NT_465515v1 17325 17807 A-rich 540 + 17325 17807 0 2 386,39, 0,443, +,+, 624511 Low_complexity Low_complexity 585 chrUn_NT_465516v1 9503 9658 GA-rich 338 + 9503 9658 0 2 34,62, 0,93, +,+, 624528 Low_complexity Low_complexity 585 chrUn_NT_465516v1 14298 14812 A-rich 576 + 14298 14812 0 2 441,38, 0,476, +,+, 624543 Low_complexity Low_complexity 585 chrUn_NT_465517v1 1017 14870 GGXHOI 584 + 1017 14870 0 3 46,24,12847, 0,693,1006, +,+,+, 624554 Satellite W-chromosome 585 chrUn_NT_465518v1 4343 7645 GGLTR10C1 915 - 4343 7645 0 3 191,2747,364, 0,191,2938, -,-,-, 624560 LTR ERVK 585 chrUn_NT_465518v1 13612 15745 CR1-C2 686 + 13612 15745 0 2 293,137, 0,1996, +,+, 624566 LINE CR1 585 chrUn_NT_465519v1 3329 4681 GGXHOI 321 - 3329 4681 0 4 775,213,130,126, 0,789,1046,1226, -,-,-,-, 624574 Satellite W-chromosome 585 chrUn_NT_465519v1 5279 6577 GGXHOI 326 - 5279 6577 0 2 420,864, 0,434, -,-, 624576 Satellite W-chromosome 585 chrUn_NT_465519v1 6662 8595 GGXHOI 301 - 6662 8595 0 4 206,392,736,491, 0,260,690,1442, -,-,-,-, 624577 Satellite W-chromosome 585 chrUn_NT_465519v1 8888 9558 GGXHOI 304 - 8888 9558 0 4 215,124,159,123, 0,232,368,547, -,-,-,-, 624579 Satellite W-chromosome 585 chrUn_NT_465519v1 9983 10764 GGXHOI 402 - 9983 10764 0 2 331,423, 0,358, -,-, 624580 Satellite W-chromosome 585 chrUn_NT_465519v1 10844 13546 GGXHOI 416 - 10844 13546 0 3 429,1779,442, 0,446,2260, -,-,-, 624581 Satellite W-chromosome 585 chrUn_NT_465519v1 13705 14723 GGXHOI 469 - 13705 14723 0 2 855,145, 0,873, -,-, 624582 Satellite W-chromosome 585 chrUn_NT_465519v1 15808 17285 GGXHOI 394 - 15808 17285 0 4 141,395,314,578, 0,152,564,899, -,-,-,-, 624586 Satellite W-chromosome 585 chrUn_NT_465521v1 4843 5332 (GCCTG)n 522 + 4843 5332 0 2 113,196, 0,293, +,+, 624602 Simple_repeat Simple_repeat 585 chrUn_NT_465521v1 6482 7100 (GCCTG)n 534 + 6482 7100 0 3 167,35,54, 0,350,564, +,+,+, 624612 Simple_repeat Simple_repeat 585 chrUn_NT_465521v1 9299 12038 GGERVL-B-int 698 + 9299 12038 0 2 1827,912, 0,1827, +,+, 624620 LTR ERVL 585 chrUn_NT_465521v1 12782 14185 GGLTR7-int 289 + 12782 14185 0 3 103,318,280, 0,105,1123, +,+,+, 624622 LTR ERV1 585 chrUn_NT_465522v1 10715 13162 GGLTR7-int 596 + 10715 13162 0 2 337,793, 0,1654, +,+, 624637 LTR ERV1 585 chrUn_NT_465522v1 13174 15591 GGERV10_LTR 821 - 13174 15591 0 2 38,39, 0,2378, -,-, 624640 LTR ERVL 585 chrUn_NT_465522v1 13343 15551 GGLTR10D-int 890 - 13343 15551 0 2 369,1836, 0,372, -,-, 624641 LTR ERVK 585 chrUn_NT_465522v1 15588 17212 (CGAGG)n 586 + 15588 17212 0 7 181,192,193,217,277,247,228, 0,235,462,655,872,1149,1396, +,+,+,+,+,+,+, 624642 Simple_repeat Simple_repeat 585 chrUn_NT_465522v1 17232 18184 (CGAGG)n 592 + 17232 18184 0 3 395,335,26, 0,409,926, +,+,+, 624644 Simple_repeat Simple_repeat 585 chrUn_NT_465524v1 145 6100 Sat-CR1_GG 154 - 145 6100 0 3 338,34,189, 0,3266,5766, -,-,-, 624674 Satellite Satellite 585 chrUn_NT_465524v1 483 3411 GGXHOI 578 - 483 3411 0 2 1722,885, 0,2043, -,-, 624675 Satellite W-chromosome 585 chrUn_NT_465524v1 5943 9466 GGXHOI 554 - 5943 9466 0 2 480,697, 0,2826, -,-, 624677 Satellite W-chromosome 585 chrUn_NT_465524v1 9035 13357 Sat-CR1_GG 166 - 9035 13357 0 4 443,43,44,1354, 0,608,2267,2968, -,-,-,-, 624679 Satellite Satellite 585 chrUn_NT_465524v1 12046 15141 GGXHOI 570 - 12046 15141 0 2 408,2424, 0,671, -,-, 624683 Satellite W-chromosome 585 chrUn_NT_465524v1 15182 17082 GGXHOI 568 - 15182 17082 0 2 1322,329, 0,1571, -,-, 624685 Satellite W-chromosome 585 chrUn_NT_465526v1 1390 2284 GGXHOI 499 - 1390 2284 0 3 251,12,209, 0,263,685, -,-,-, 624709 Satellite W-chromosome 585 chrUn_NT_465526v1 2353 3265 GGXHOI 616 - 2353 3265 0 2 16,573, 0,339, -,-, 624711 Satellite W-chromosome 585 chrUn_NT_465526v1 3281 7112 GGXHOI 556 - 3281 7112 0 7 292,192,296,316,373,193,159, 0,616,1203,1822,2338,3034,3672, -,-,-,-,-,-,-, 624714 Satellite W-chromosome 585 chrUn_NT_465526v1 7182 13164 GGXHOI 556 - 7182 13164 0 11 17,195,297,195,296,194,297,194,371,194,160, 0,339,930,1550,2142,2761,3353,3973,4486,5180,5822, -,-,-,-,-,-,-,-,-,-,-, 624721 Satellite W-chromosome 585 chrUn_NT_465526v1 13240 16771 GGXHOI 526 - 13240 16771 0 8 19,203,18,248,219,298,316,213, 0,285,500,960,1501,2112,2731,3318, -,-,-,-,-,-,-,-, 624732 Satellite W-chromosome 585 chrUn_NT_465526v1 16842 17153 GGXHOI 442 - 16842 17153 0 2 27,94, 0,217, -,-, 624739 Satellite W-chromosome 585 chrUn_NT_465526v1 17312 18171 GGXHOI 490 - 17312 18171 0 2 604,58, 0,801, -,-, 624741 Satellite W-chromosome 585 chrUn_NT_465527v1 6332 7201 GGLTR12C 590 - 6332 7201 0 2 204,641, 0,228, -,-, 624744 LTR ERVL 585 chrUn_NT_465527v1 11201 13010 GGERV28_I-int 154 - 11201 13010 0 2 326,355, 0,1454, -,-, 624749 LTR ERVK 585 chrUn_NT_465527v1 16510 18153 GGLTR3B4 391 - 16510 18153 0 2 1537,106, 0,1537, -,-, 624751 LTR ERVL 585 chrUn_NT_465530v1 2069 4482 GGLTR3F1 823 + 2069 4482 0 3 231,82,1927, 0,402,486, +,+,+, 624780 LTR ERVL 585 chrUn_NT_465531v1 16577 17451 CR1-H 735 - 16577 17451 0 2 311,525, 0,349, -,-, 624799 LINE CR1 585 chrUn_NT_465532v1 10543 11684 CR1-D 730 + 10543 11684 0 2 328,793, 0,348, +,+, 624806 LINE CR1 585 chrUn_NT_465533v1 61 622 (TCCA)n 613 + 61 622 0 2 369,192, 0,369, +,+, 624811 Simple_repeat Simple_repeat 585 chrUn_NT_465533v1 2966 3477 (CATCC)n 774 + 2966 3477 0 2 195,138, 0,373, +,+, 624820 Simple_repeat Simple_repeat 585 chrUn_NT_465534v1 2333 2948 CR1-H 389 - 2333 2948 0 2 375,204, 0,411, -,-, 624850 LINE CR1 585 chrUn_NT_465534v1 4472 5391 CR1-C2 436 + 4472 5391 0 2 170,130, 0,789, +,+, 624852 LINE CR1 585 chrUn_NT_465534v1 7090 7554 CR1-B 583 - 7090 7554 0 2 353,56, 0,408, -,-, 624856 LINE CR1 585 chrUn_NT_465534v1 9399 10003 CR1-H 363 - 9399 10003 0 2 364,208, 0,396, -,-, 624859 LINE CR1 585 chrUn_NT_465534v1 11867 12488 CR1-H 369 - 11867 12488 0 2 377,208, 0,413, -,-, 624862 LINE CR1 585 chrUn_NT_465534v1 14355 14874 CR1-H 459 - 14355 14874 0 3 117,49,198, 0,243,321, -,-,-, 624865 LINE CR1 585 chrUn_NT_465534v1 16716 17292 CR1-H 296 - 16716 17292 0 3 62,90,208, 0,257,368, -,-,-, 624869 LINE CR1 585 chrUn_NT_465535v1 1733 2329 (CGAGG)n 532 + 1733 2329 0 2 180,381, 0,215, +,+, 624876 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 2678 3354 (CGAGG)n 512 + 2678 3354 0 2 177,486, 0,190, +,+, 624879 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 3504 4474 (CGAGG)n 500 + 3504 4474 0 2 620,183, 0,787, +,+, 624880 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 6008 6687 (CGAGG)n 520 + 6008 6687 0 4 47,169,240,177, 0,59,245,502, +,+,+,+, 624889 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 6756 7069 (CGAGG)n 538 + 6756 7069 0 2 176,120, 0,193, +,+, 624890 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 7803 9003 (CGAGG)n 456 + 7803 9003 0 2 320,859, 0,341, +,+, 624896 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 10751 12445 (CGAGG)n 559 + 10751 12445 0 6 367,239,177,295,153,196, 0,378,645,847,1167,1498, +,+,+,+,+,+, 624902 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 12789 14429 (CGAGG)n 511 + 12789 14429 0 2 1213,405, 0,1235, +,+, 624906 Simple_repeat Simple_repeat 585 chrUn_NT_465535v1 17391 17822 (CGAGG)n 519 + 17391 17822 0 2 244,175, 0,256, +,+, 624917 Simple_repeat Simple_repeat 585 chrUn_NT_465536v1 14307 16057 GGERVL-A-int 743 + 14307 16057 0 2 454,1296, 0,454, +,+, 624929 LTR ERVL 585 chrUn_NT_465537v1 4948 7354 GGLTR3F1 683 + 4948 7354 0 2 476,1928, 0,478, +,+, 624938 LTR ERVL 585 chrUn_NT_465538v1 6216 7596 GGLTR7-int 320 - 6216 7596 0 3 274,207,101, 0,1018,1279, -,-,-, 624947 LTR ERV1 585 chrUn_NT_465538v1 8317 11131 GGERVL-B-int 655 - 8317 11131 0 2 913,1901, 0,913, -,-, 624949 LTR ERVL 585 chrUn_NT_465538v1 14348 14750 (CAGGC)n 427 + 14348 14750 0 2 191,211, 0,191, +,+, 624957 Simple_repeat Simple_repeat 585 chrUn_NT_465538v1 15543 16574 CR1-F0 844 + 15543 16574 0 2 598,431, 0,600, +,+, 624963 LINE CR1 585 chrUn_NT_465539v1 16922 17521 CR1-C2 585 - 16922 17521 0 2 54,277, 0,322, -,-, 624974 LINE CR1 585 chrUn_NT_465540v1 11382 12587 GGXHOI 307 - 11382 12587 0 4 299,195,508,127, 0,344,556,1078, -,-,-,-, 624978 Satellite W-chromosome 585 chrUn_NT_465540v1 12668 14505 GGXHOI 391 - 12668 14505 0 2 1420,396, 0,1441, -,-, 624979 Satellite W-chromosome 585 chrUn_NT_465540v1 16696 18066 GGXHOI 370 - 16696 18066 0 3 288,632,384, 0,338,986, -,-,-, 624981 Satellite W-chromosome 585 chrUn_NT_465542v1 12462 13123 GGLTR11-int 451 + 12462 13123 0 3 125,56,304, 0,301,357, +,+,+, 624998 LTR ERV1 585 chrUn_NT_465543v1 1188 2239 GGXHOI 392 + 1188 2239 0 2 472,516, 0,535, +,+, 625006 Satellite W-chromosome 585 chrUn_NT_465543v1 2338 3389 GGXHOI 392 + 2338 3389 0 2 472,516, 0,535, +,+, 625007 Satellite W-chromosome 585 chrUn_NT_465543v1 4415 4829 (CAAGG)n 492 + 4415 4829 0 2 178,200, 0,214, +,+, 625013 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 5000 5991 (CCTTG)n 491 + 5000 5991 0 2 377,586, 0,405, +,+, 625015 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 6559 7444 (CAAGG)n 492 + 6559 7444 0 3 192,373,259, 0,236,626, +,+,+, 625018 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 7532 7792 (CCTTG)n 498 + 7532 7792 0 2 178,24, 0,236, +,+, 625019 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 7845 8204 (CCTTG)n 496 + 7845 8204 0 2 156,184, 0,175, +,+, 625021 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 8307 8671 (CCTTG)n 428 + 8307 8671 0 2 262,75, 0,289, +,+, 625023 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 8925 9238 (GCCTG)n 368 + 8925 9238 0 2 90,41, 0,272, +,+, 625025 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 9284 9639 (GCCTG)n 309 + 9284 9639 0 2 40,265, 0,90, +,+, 625028 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 10725 11032 (GCCTG)n 370 + 10725 11032 0 2 84,41, 0,266, +,+, 625035 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 11078 11436 (GCCTG)n 300 + 11078 11436 0 2 40,255, 0,103, +,+, 625038 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 11696 12346 (CAAGG)n 532 + 11696 12346 0 2 374,250, 0,400, +,+, 625041 Simple_repeat Simple_repeat 585 chrUn_NT_465543v1 16956 18037 GGXHOI 380 + 16956 18037 0 2 594,424, 0,657, +,+, 625050 Satellite W-chromosome 585 chrUn_NT_465544v1 1238 2503 (CGAGG)n 526 + 1238 2503 0 2 944,267, 0,998, +,+, 625056 Simple_repeat Simple_repeat 585 chrUn_NT_465544v1 5201 6981 (CGAGG)n 530 + 5201 6981 0 2 183,1572, 0,208, +,+, 625066 Simple_repeat Simple_repeat 585 chrUn_NT_465544v1 8204 11093 (CGAGG)n 486 + 8204 11093 0 3 183,1079,1546, 0,208,1343, +,+,+, 625071 Simple_repeat Simple_repeat 585 chrUn_NT_465544v1 11378 12165 (CGAGG)n 500 + 11378 12165 0 2 134,332, 0,455, +,+, 625075 Simple_repeat Simple_repeat 585 chrUn_NT_465544v1 12825 13822 (CGAGG)n 518 + 12825 13822 0 2 713,267, 0,730, +,+, 625080 Simple_repeat Simple_repeat 585 chrUn_NT_465544v1 15128 15583 (CGAGG)n 531 + 15128 15583 0 2 237,183, 0,272, +,+, 625087 Simple_repeat Simple_repeat 585 chrUn_NT_465545v1 13652 13987 (CCTTG)n 602 + 13652 13987 0 2 113,41, 0,294, +,+, 625105 Simple_repeat Simple_repeat 585 chrUn_NT_465545v1 14242 15354 (CCTTG)n 555 + 14242 15354 0 3 258,229,574, 0,292,538, +,+,+, 625108 Simple_repeat Simple_repeat 585 chrUn_NT_465546v1 2881 4854 GGXHOI 341 - 2881 4854 0 3 242,765,884, 0,275,1089, -,-,-, 625125 Satellite W-chromosome 585 chrUn_NT_465546v1 4930 5674 GGXHOI 322 - 4930 5674 0 2 359,324, 0,420, -,-, 625126 Satellite W-chromosome 585 chrUn_NT_465546v1 5760 12868 GGXHOI 371 - 5760 12868 0 5 1121,1173,136,3655,930, 0,1155,2343,2501,6178, -,-,-,-,-, 625127 Satellite W-chromosome 585 chrUn_NT_465546v1 13718 17243 GGXHOI 367 - 13718 17243 0 3 2070,492,920, 0,2090,2605, -,-,-, 625129 Satellite W-chromosome 585 chrUn_NT_465547v1 2477 4916 GGLTR7-int 590 - 2477 4916 0 2 791,333, 0,2106, -,-, 625133 LTR ERV1 585 chrUn_NT_465548v1 9991 12083 GGLTR7-int 482 + 9991 12083 0 2 1384,75, 0,2017, +,+, 625156 LTR ERV1 585 chrUn_NT_465548v1 16574 17392 Z-REP 470 - 16574 17392 0 2 295,444, 0,374, -,-, 625160 Satellite macro 585 chrUn_NT_465550v1 4381 4555 (GTTCTTTCC)n 889 + 4381 4555 0 2 75,45, 0,129, +,+, 625170 Simple_repeat Simple_repeat 585 chrUn_NT_465550v1 12992 13172 (GTTGTTTCC)n 967 + 12992 13172 0 2 78,51, 0,129, +,+, 625198 Simple_repeat Simple_repeat 585 chrUn_NT_465550v1 13298 13460 (GTTGTTTCC)n 970 + 13298 13460 0 2 69,42, 0,120, +,+, 625199 Simple_repeat Simple_repeat 585 chrUn_NT_465550v1 15445 15598 (GTTGTTTCC)n 983 + 15445 15598 0 2 60,42, 0,111, +,+, 625203 Simple_repeat Simple_repeat 585 chrUn_NT_465551v1 2596 4135 GGXHOI 594 - 2596 4135 0 2 408,573, 0,966, -,-, 625215 Satellite W-chromosome 585 chrUn_NT_465551v1 4860 10923 GGXHOI 599 - 4860 10923 0 10 406,299,148,299,148,299,148,299,147,572, 0,1080,1390,2212,2522,3344,3654,4476,4786,5491, -,-,-,-,-,-,-,-,-,-, 625218 Satellite W-chromosome 585 chrUn_NT_465551v1 12780 16287 GGXHOI 572 - 12780 16287 0 6 247,106,414,147,570,364, 0,258,955,1380,2084,3143, -,-,-,-,-,-, 625227 Satellite W-chromosome 585 chrUn_NT_465551v1 16486 17999 GGXHOI 594 - 16486 17999 0 2 841,661, 0,852, -,-, 625232 Satellite W-chromosome 585 chrUn_NT_465555v1 6697 9129 GGXHOI 413 - 6697 9129 0 4 262,702,1306,64, 0,325,1042,2368, -,-,-,-, 625275 Satellite W-chromosome 585 chrUn_NT_465555v1 9265 15500 GGXHOI 412 - 9265 15500 0 5 1253,1595,1505,975,807, 0,1273,2883,4442,5428, -,-,-,-,-, 625276 Satellite W-chromosome 585 chrUn_NT_465555v1 15707 18017 GGXHOI 340 - 15707 18017 0 4 232,265,938,786, 0,249,533,1524, -,-,-,-, 625277 Satellite W-chromosome 585 chrUn_NT_465557v1 2417 5482 GGXHOI 387 - 2417 5482 0 3 1796,64,1130, 0,1854,1935, -,-,-, 625291 Satellite W-chromosome 585 chrUn_NT_465557v1 5665 8273 GGXHOI 381 - 5665 8273 0 4 395,473,394,1208, 0,457,948,1400, -,-,-,-, 625292 Satellite W-chromosome 585 chrUn_NT_465557v1 11244 14360 GGXHOI 333 - 11244 14360 0 4 264,1318,629,804, 0,325,1668,2312, -,-,-,-, 625295 Satellite W-chromosome 585 chrUn_NT_465558v1 2138 18019 GGXHOI 538 - 2138 18019 0 27 11,37,196,193,199,194,289,213,247,194,196,223,299,194,196,194,299,194,198,194,197,194,299,807,195,1152,229, 0,490,936,1454,2059,2582,3083,3663,4246,4813,5420,5911,6445,7067,7675,8194,8699,9321,9928,10449,11056,11576,12081,12703,13834,14439,15652, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 625303 Satellite W-chromosome 585 chrUn_NT_465559v1 5273 6133 (CGAGG)n 534 + 5273 6133 0 2 655,176, 0,684, +,+, 625337 Simple_repeat Simple_repeat 585 chrUn_NT_465559v1 6375 6911 (CGAGG)n 531 + 6375 6911 0 2 177,323, 0,213, +,+, 625339 Simple_repeat Simple_repeat 585 chrUn_NT_465559v1 10160 10734 (CGAGG)n 568 + 10160 10734 0 2 176,386, 0,188, +,+, 625353 Simple_repeat Simple_repeat 585 chrUn_NT_465559v1 10797 11356 (CGAGG)n 576 + 10797 11356 0 2 177,350, 0,209, +,+, 625355 Simple_repeat Simple_repeat 585 chrUn_NT_465559v1 11416 12633 (CGAGG)n 505 + 11416 12633 0 3 681,181,325, 0,698,892, +,+,+, 625357 Simple_repeat Simple_repeat 585 chrUn_NT_465559v1 16613 17417 (CGAGG)n 463 + 16613 17417 0 2 612,177, 0,627, +,+, 625374 Simple_repeat Simple_repeat 585 chrUn_NT_465560v1 1065 1990 (CAAGG)n 511 + 1065 1990 0 3 355,359,178, 0,355,747, +,+,+, 625381 Simple_repeat Simple_repeat 585 chrUn_NT_465560v1 2009 2410 (CCTTG)n 451 + 2009 2410 0 2 182,183, 0,218, +,+, 625382 Simple_repeat Simple_repeat 585 chrUn_NT_465560v1 2590 3035 (CCTTG)n 523 + 2590 3035 0 2 192,223, 0,222, +,+, 625384 Simple_repeat Simple_repeat 585 chrUn_NT_465560v1 3519 4867 GGXHOI 355 - 3519 4867 0 2 814,472, 0,876, -,-, 625385 Satellite W-chromosome 585 chrUn_NT_465560v1 5592 7137 GGXHOI 378 - 5592 7137 0 2 1010,472, 0,1073, -,-, 625387 Satellite W-chromosome 585 chrUn_NT_465560v1 7236 8287 GGXHOI 378 - 7236 8287 0 2 516,472, 0,579, -,-, 625388 Satellite W-chromosome 585 chrUn_NT_465560v1 8386 9437 GGXHOI 378 - 8386 9437 0 2 516,472, 0,579, -,-, 625389 Satellite W-chromosome 585 chrUn_NT_465560v1 9536 10585 GGXHOI 376 - 9536 10585 0 2 516,470, 0,579, -,-, 625390 Satellite W-chromosome 585 chrUn_NT_465562v1 322 1698 GGXHOI 510 + 322 1698 0 3 388,289,227, 0,648,1149, +,+,+, 625410 Satellite W-chromosome 585 chrUn_NT_465562v1 2702 18005 GGXHOI 578 + 2702 18005 0 13 1405,504,2691,393,560,393,393,641,641,393,1601,640,740, 0,1695,2518,5528,6491,7366,8078,8792,9752,10963,11677,13600,14563, +,+,+,+,+,+,+,+,+,+,+,+,+, 625415 Satellite W-chromosome 585 chrUn_NT_465562v1 4107 5220 Sat-CR1_GG 218 + 4107 5220 0 2 290,319, 0,794, +,+, 625416 Satellite Satellite 585 chrUn_NT_465562v1 7911 9193 Sat-CR1_GG 222 + 7911 9193 0 2 319,570, 0,712, +,+, 625417 Satellite Satellite 585 chrUn_NT_465562v1 9753 13665 Sat-CR1_GG 222 + 9753 13665 0 5 315,319,321,319,570, 0,708,1420,2382,3342, +,+,+,+,+, 625418 Satellite Satellite 585 chrUn_NT_465563v1 2271 3757 GGXHOI 394 - 2271 3757 0 2 1200,227, 0,1259, -,-, 625423 Satellite W-chromosome 585 chrUn_NT_465563v1 3859 10469 GGXHOI 390 - 3859 10469 0 7 250,1505,625,887,615,625,1921, 0,275,1821,2471,3383,4039,4689, -,-,-,-,-,-,-, 625424 Satellite W-chromosome 585 chrUn_NT_465563v1 11415 17994 GGXHOI 407 - 11415 17994 0 3 1900,1267,3330, 0,1941,3249, -,-,-, 625426 Satellite W-chromosome 585 chrUn_NT_465564v1 6464 7074 CR1-H 655 + 6464 7074 0 2 467,137, 0,473, +,+, 625433 LINE CR1 585 chrUn_NT_465565v1 1704 3414 GGXHOI 371 - 1704 3414 0 2 1032,656, 0,1054, -,-, 625441 Satellite W-chromosome 585 chrUn_NT_465565v1 6346 6922 GGXHOI 409 - 6346 6922 0 2 352,205, 0,371, -,-, 625444 Satellite W-chromosome 585 chrUn_NT_465565v1 7313 16771 GGXHOI 397 - 7313 16771 0 7 621,159,1501,948,2818,481,2730, 0,657,861,2385,3356,6232,6728, -,-,-,-,-,-,-, 625445 Satellite W-chromosome 585 chrUn_NT_465566v1 3119 3613 CR1-H 636 - 3119 3613 0 2 188,176, 0,318, -,-, 625454 LINE CR1 585 chrUn_NT_465566v1 8706 10579 GGLTR7-int 619 + 8706 10579 0 4 526,623,76,33, 0,526,1763,1840, +,+,+,+, 625456 LTR ERV1 585 chrUn_NT_465568v1 2619 2926 GGXHOI 383 - 2619 2926 0 2 139,121, 0,186, -,-, 625480 Satellite W-chromosome 585 chrUn_NT_465569v1 203 653 (CAAGG)n 428 + 203 653 0 2 222,202, 0,248, +,+, 625496 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 1068 1508 (CCTTG)n 447 + 1068 1508 0 2 211,189, 0,251, +,+, 625499 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 2321 2730 (CAAGG)n 458 + 2321 2730 0 2 182,203, 0,206, +,+, 625504 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 2928 3253 (CAAGG)n 417 + 2928 3253 0 2 64,254, 0,71, +,+, 625506 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 3963 4594 (CCTTG)n 527 + 3963 4594 0 2 250,355, 0,276, +,+, 625510 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 5755 6538 (CAAGG)n 463 + 5755 6538 0 4 188,188,125,25, 0,228,448,758, +,+,+,+, 625516 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 6592 7621 (CCTTG)n 488 + 6592 7621 0 3 200,609,187, 0,233,842, +,+,+, 625518 Simple_repeat Simple_repeat 585 chrUn_NT_465569v1 7646 8069 GGXHOI 307 - 7646 8069 0 2 193,214, 0,209, -,-, 625519 Satellite W-chromosome 585 chrUn_NT_465569v1 8698 10321 GGXHOI 375 - 8698 10321 0 2 517,1043, 0,580, -,-, 625521 Satellite W-chromosome 585 chrUn_NT_465569v1 13047 14976 GGXHOI 362 - 13047 14976 0 2 992,876, 0,1053, -,-, 625524 Satellite W-chromosome 585 chrUn_NT_465570v1 6958 7412 CR1-F 395 + 6958 7412 0 2 205,193, 0,261, +,+, 625541 LINE CR1 585 chrUn_NT_465570v1 7454 10418 CR1-F 547 + 7454 10418 0 9 203,204,155,198,180,153,200,203,179, 0,245,717,1162,1633,1857,2298,2540,2785, +,+,+,+,+,+,+,+,+, 625542 LINE CR1 585 chrUn_NT_465570v1 10462 12331 CR1-F 600 + 10462 12331 0 6 177,191,200,203,204,171, 0,222,455,955,1200,1698, +,+,+,+,+,+, 625547 LINE CR1 585 chrUn_NT_465570v1 12379 14259 CR1-F 542 + 12379 14259 0 6 175,186,204,206,208,176, 0,220,448,950,1196,1704, +,+,+,+,+,+, 625550 LINE CR1 585 chrUn_NT_465570v1 14304 14724 CR1-F 704 + 14304 14724 0 2 181,194, 0,226, +,+, 625553 LINE CR1 585 chrUn_NT_465570v1 14767 17352 CR1-F 526 + 14767 17352 0 8 202,203,204,204,155,204,205,181, 0,505,750,996,1466,1911,2157,2404, +,+,+,+,+,+,+,+, 625554 LINE CR1 585 chrUn_NT_465570v1 17396 17957 CR1-F 717 + 17396 17957 0 3 178,190,106, 0,223,455, +,+,+, 625558 LINE CR1 585 chrUn_NT_465571v1 482 944 GGXHOI 437 - 482 944 0 2 305,135, 0,327, -,-, 625560 Satellite W-chromosome 585 chrUn_NT_465571v1 2409 4479 GGXHOI 380 - 2409 4479 0 2 1028,1018, 0,1052, -,-, 625563 Satellite W-chromosome 585 chrUn_NT_465571v1 5501 5996 GGXHOI 364 - 5501 5996 0 2 143,341, 0,154, -,-, 625567 Satellite W-chromosome 585 chrUn_NT_465571v1 6085 8433 GGXHOI 330 - 6085 8433 0 4 876,274,357,784, 0,896,1187,1564, -,-,-,-, 625568 Satellite W-chromosome 585 chrUn_NT_465571v1 8557 9881 GGXHOI 315 - 8557 9881 0 3 265,675,284, 0,324,1040, -,-,-, 625569 Satellite W-chromosome 585 chrUn_NT_465571v1 10531 17967 GGXHOI 369 - 10531 17967 0 9 2185,1466,620,167,871,305,435,884,194, 0,2246,3765,4412,4605,5496,5848,6299,7242, -,-,-,-,-,-,-,-,-, 625570 Satellite W-chromosome 585 chrUn_NT_465572v1 5709 6319 CR1-H 630 - 5709 6319 0 2 141,463, 0,147, -,-, 625576 LINE CR1 585 chrUn_NT_465572v1 8956 9413 CR1-H 677 - 8956 9413 0 2 163,294, 0,163, -,-, 625580 LINE CR1 585 chrUn_NT_465573v1 9864 11054 (CCTTG)n 592 + 9864 11054 0 4 89,49,220,399, 0,332,559,791, +,+,+,+, 625604 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 10245 10663 (GCCTG)n 595 + 10245 10663 0 2 178,240, 0,178, +,+, 625606 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 11074 11482 (CCTTG)n 460 + 11074 11482 0 2 184,205, 0,203, +,+, 625608 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 11476 11889 (GCCTG)n 493 + 11476 11889 0 2 179,218, 0,195, +,+, 625609 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 12646 13081 (GCCTG)n 579 + 12646 13081 0 2 178,257, 0,178, +,+, 625616 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 13301 13699 (GCCTG)n 508 + 13301 13699 0 2 184,194, 0,204, +,+, 625618 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 13829 14536 (GCCTG)n 466 + 13829 14536 0 2 466,63, 0,644, +,+, 625620 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 14519 14836 (CCTTG)n 556 + 14519 14836 0 2 104,31, 0,286, +,+, 625622 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 15080 15435 (GCCTG)n 568 + 15080 15435 0 2 146,25, 0,330, +,+, 625626 Simple_repeat Simple_repeat 585 chrUn_NT_465573v1 16266 17393 CR1-F2 878 + 16266 17393 0 2 656,471, 0,656, +,+, 625630 LINE CR1 585 chrUn_NT_465574v1 12527 14970 GGLTR7-int 572 + 12527 14970 0 2 339,781, 0,1662, +,+, 625643 LTR ERV1 585 chrUn_NT_465574v1 15138 17331 GGLTR10D-int 929 - 15138 17331 0 2 361,1829, 0,364, -,-, 625646 LTR ERVK 585 chrUn_NT_465574v1 17418 17939 (CGAGG)n 534 + 17418 17939 0 2 188,320, 0,201, +,+, 625648 Simple_repeat Simple_repeat 585 chrUn_NT_465575v1 4509 6788 GGXHOI 335 - 4509 6788 0 2 1089,1173, 0,1106, -,-, 625650 Satellite W-chromosome 585 chrUn_NT_465575v1 6898 9333 GGXHOI 356 - 6898 9333 0 2 298,2122, 0,313, -,-, 625651 Satellite W-chromosome 585 chrUn_NT_465575v1 9406 14253 GGXHOI 354 - 9406 14253 0 7 282,2027,134,1570,142,447,137, 0,301,2340,2493,4078,4251,4710, -,-,-,-,-,-,-, 625652 Satellite W-chromosome 585 chrUn_NT_465575v1 14333 16932 GGXHOI 387 - 14333 16932 0 5 1251,138,278,472,362, 0,1266,1416,1712,2237, -,-,-,-,-, 625653 Satellite W-chromosome 585 chrUn_NT_465577v1 7168 9804 GGXHOI 539 - 7168 9804 0 3 117,106,708, 0,1800,1928, -,-,-, 625672 Satellite W-chromosome 585 chrUn_NT_465577v1 9847 12592 GGXHOI 548 - 9847 12592 0 3 280,85,733, 0,1674,2012, -,-,-, 625675 Satellite W-chromosome 585 chrUn_NT_465577v1 12634 17098 GGXHOI 548 - 12634 17098 0 4 912,122,282,101, 0,1641,3392,4363, -,-,-,-, 625679 Satellite W-chromosome 585 chrUn_NT_465578v1 8651 9497 (CCCCATTGGG)n 441 + 8651 9497 0 4 393,159,147,141, 0,393,558,705, +,+,+,+, 625691 Satellite Satellite 585 chrUn_NT_465578v1 16853 17221 (ACCCATAGAG)n 600 + 16853 17221 0 2 151,95, 0,273, +,+, 625704 Satellite Satellite 585 chrUn_NT_465578v1 17446 17951 (ACCCATAGAG)n 602 + 17446 17951 0 2 162,343, 0,162, +,+, 625709 Satellite Satellite 585 chrUn_NT_465579v1 8855 9891 (CCCTAA)n 588 + 8855 9891 0 3 458,358,178, 0,470,858, +,+,+, 625711 Simple_repeat Simple_repeat 585 chrUn_NT_465579v1 10374 10812 (CCCTAA)n 708 + 10374 10812 0 2 192,187, 0,251, +,+, 625715 Simple_repeat Simple_repeat 585 chrUn_NT_465579v1 10854 12391 (CCCTAA)n 622 + 10854 12391 0 4 384,201,183,493, 0,594,837,1044, +,+,+,+, 625717 Simple_repeat Simple_repeat 585 chrUn_NT_465579v1 11238 11448 (CCTAA)n 494 + 11238 11448 0 2 6,26, 0,184, +,+, 625718 Simple_repeat Simple_repeat 585 chrUn_NT_465579v1 12569 17777 GGXHOI 376 + 12569 17777 0 5 372,969,2005,965,789, 0,386,1372,3432,4419, +,+,+,+,+, 625721 Satellite W-chromosome 585 chrUn_NT_465580v1 9304 10252 CR1-B2 494 + 9304 10252 0 2 195,194, 0,754, +,+, 625727 LINE CR1 585 chrUn_NT_465581v1 9639 9960 (CACTC)n 254 + 9639 9960 0 2 194,83, 0,238, +,+, 625760 Simple_repeat Simple_repeat 585 chrUn_NT_465582v1 14095 14728 CR1-Y4 414 - 14095 14728 0 2 327,134, 0,499, -,-, 625801 LINE CR1 585 chrUn_NT_465582v1 17403 17542 CR1-F0 521 - 17403 17542 0 2 75,57, 0,82, -,-, 625803 LINE CR1 585 chrUn_NT_465582v1 17566 17715 CR1-F0 593 - 17566 17715 0 2 73,67, 0,82, -,-, 625804 LINE CR1 585 chrUn_NT_465584v1 784 1714 GGXHOI 402 - 784 1714 0 2 483,431, 0,499, -,-, 625815 Satellite W-chromosome 585 chrUn_NT_465584v1 1940 2583 GGXHOI 374 - 1940 2583 0 2 364,219, 0,424, -,-, 625816 Satellite W-chromosome 585 chrUn_NT_465584v1 2793 5011 GGXHOI 383 - 2793 5011 0 3 474,1410,230, 0,534,1988, -,-,-, 625817 Satellite W-chromosome 585 chrUn_NT_465584v1 5134 6159 GGXHOI 366 - 5134 6159 0 2 289,675, 0,350, -,-, 625818 Satellite W-chromosome 585 chrUn_NT_465584v1 7205 8516 GGXHOI 432 - 7205 8516 0 3 410,272,570, 0,451,741, -,-,-, 625821 Satellite W-chromosome 585 chrUn_NT_465584v1 10002 10717 GGXHOI 393 - 10002 10717 0 2 278,418, 0,297, -,-, 625824 Satellite W-chromosome 585 chrUn_NT_465584v1 10811 12618 GGXHOI 429 - 10811 12618 0 2 1473,272, 0,1535, -,-, 625825 Satellite W-chromosome 585 chrUn_NT_465584v1 13098 14597 GGXHOI 421 - 13098 14597 0 3 406,270,763, 0,448,736, -,-,-, 625826 Satellite W-chromosome 585 chrUn_NT_465584v1 14710 16454 GGXHOI 410 - 14710 16454 0 3 632,474,604, 0,650,1140, -,-,-, 625827 Satellite W-chromosome 585 chrUn_NT_465585v1 631 940 CR1-X 543 - 631 940 0 3 50,78,171, 0,60,138, -,-,-, 625831 LINE CR1 585 chrUn_NT_465585v1 6408 7528 CR1-B2 648 + 6408 7528 0 2 224,896, 0,224, +,+, 625834 LINE CR1 585 chrUn_NT_465585v1 12944 13421 CR1-X 483 + 12944 13421 0 3 89,130,219, 0,89,258, +,+,+, 625841 LINE CR1 585 chrUn_NT_465587v1 3475 10854 GGXHOI 397 + 3475 10854 0 9 879,244,664,674,414,1150,142,390,2636, 0,896,1165,1844,2532,2962,4129,4334,4743, +,+,+,+,+,+,+,+,+, 625859 Satellite W-chromosome 585 chrUn_NT_465588v1 3318 4001 CR1-H 799 - 3318 4001 0 2 146,518, 0,165, -,-, 625871 LINE CR1 585 chrUn_NT_465588v1 9807 11860 GGLTR7-int 473 + 9807 11860 0 2 1325,71, 0,1982, +,+, 625874 LTR ERV1 585 chrUn_NT_465588v1 16737 16941 CR1-H 567 - 16737 16941 0 2 112,84, 0,120, -,-, 625879 LINE CR1 585 chrUn_NT_465589v1 3648 4018 GGERVK10-int 273 - 3648 4018 0 2 86,141, 0,229, -,-, 625882 LTR ERVK 585 chrUn_NT_465591v1 14395 14761 GGERVK10-int 304 - 14395 14761 0 2 82,141, 0,225, -,-, 625916 LTR ERVK 585 chrUn_NT_465592v1 996 2160 CR1-B2 612 - 996 2160 0 2 926,233, 0,931, -,-, 625920 LINE CR1 585 chrUn_NT_465592v1 7565 7814 CR1-X 533 - 7565 7814 0 2 78,171, 0,78, -,-, 625924 LINE CR1 585 chrUn_NT_465592v1 13358 14470 CR1-B2 701 - 13358 14470 0 2 888,221, 0,891, -,-, 625930 LINE CR1 585 chrUn_NT_465593v1 1873 2591 GGXHOI 327 - 1873 2591 0 2 405,298, 0,420, -,-, 625935 Satellite W-chromosome 585 chrUn_NT_465593v1 2728 4230 GGXHOI 290 - 2728 4230 0 2 1326,132, 0,1370, -,-, 625936 Satellite W-chromosome 585 chrUn_NT_465593v1 4603 6733 GGXHOI 333 - 4603 6733 0 3 609,266,1215, 0,631,915, -,-,-, 625938 Satellite W-chromosome 585 chrUn_NT_465593v1 6780 17889 GGXHOI 391 - 6780 17889 0 7 172,1053,4166,1405,141,3173,858, 0,195,1290,5477,6905,7064,10251, -,-,-,-,-,-,-, 625940 Satellite W-chromosome 585 chrUn_NT_465597v1 1576 14374 Charlie12_GGa 463 - 1576 14374 0 3 78,91,67, 0,6333,12731, -,-,-, 625967 DNA hAT-Charlie 585 chrUn_NT_465598v1 47 1210 (CGAGG)n 558 + 47 1210 0 3 422,112,102, 0,615,1061, +,+,+, 625997 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 2589 3963 (CGAGG)n 525 + 2589 3963 0 3 298,188,551, 0,298,823, +,+,+, 626007 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 5984 6393 (CGAGG)n 530 + 5984 6393 0 2 193,216, 0,193, +,+, 626020 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 6492 8218 (CGAGG)n 568 + 6492 8218 0 4 249,479,285,358, 0,428,1083,1368, +,+,+,+, 626022 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 8334 8991 (CGAGG)n 618 + 8334 8991 0 3 177,191,104, 0,177,553, +,+,+, 626026 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 10161 10812 (CGAGG)n 526 + 10161 10812 0 2 288,346, 0,305, +,+, 626035 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 11965 12618 (CGAGG)n 587 + 11965 12618 0 3 154,129,193, 0,331,460, +,+,+, 626041 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 13042 13806 (CGAGG)n 465 + 13042 13806 0 3 193,380,110, 0,213,654, +,+,+, 626045 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 13849 15498 (CGAGG)n 478 + 13849 15498 0 7 84,187,246,186,233,181,427, 0,113,323,593,786,1030,1222, +,+,+,+,+,+,+, 626047 Simple_repeat Simple_repeat 585 chrUn_NT_465598v1 15800 16419 (CGAGG)n 596 + 15800 16419 0 2 412,182, 0,437, +,+, 626051 Simple_repeat Simple_repeat 585 chrUn_NT_465599v1 2093 2978 (GCCTG)n 528 + 2093 2978 0 2 206,133, 0,752, +,+, 626065 Simple_repeat Simple_repeat 585 chrUn_NT_465599v1 2299 3048 (CCTTG)n 477 + 2299 3048 0 3 244,121,203, 0,425,546, +,+,+, 626066 Simple_repeat Simple_repeat 585 chrUn_NT_465599v1 3267 3811 (GCCTG)n 526 + 3267 3811 0 2 233,120, 0,424, +,+, 626070 Simple_repeat Simple_repeat 585 chrUn_NT_465599v1 6316 9128 GGERVL-B-int 663 + 6316 9128 0 2 1895,917, 0,1895, +,+, 626076 LTR ERVL 585 chrUn_NT_465599v1 9861 11247 GGLTR7-int 308 + 9861 11247 0 3 98,257,279, 0,100,1107, +,+,+, 626078 LTR ERV1 585 chrUn_NT_465600v1 2780 6424 GGXHOI 318 - 2780 6424 0 4 136,129,890,2395, 0,148,298,1249, -,-,-,-, 626087 Satellite W-chromosome 585 chrUn_NT_465600v1 6500 15465 GGXHOI 356 - 6500 15465 0 5 2526,3905,1762,323,351, 0,2569,6496,8278,8614, -,-,-,-,-, 626089 Satellite W-chromosome 585 chrUn_NT_465600v1 17201 17658 GGXHOI 395 - 17201 17658 0 2 245,152, 0,305, -,-, 626094 Satellite W-chromosome 585 chrUn_NT_465601v1 2327 2973 GGXHOI 404 + 2327 2973 0 2 235,396, 0,250, +,+, 626099 Satellite W-chromosome 585 chrUn_NT_465601v1 3076 5054 GGXHOI 393 + 3076 5054 0 3 778,397,767, 0,793,1211, +,+,+, 626100 Satellite W-chromosome 585 chrUn_NT_465601v1 5762 6215 GGXHOI 382 + 5762 6215 0 2 323,111, 0,342, +,+, 626102 Satellite W-chromosome 585 chrUn_NT_465601v1 10014 10993 GGXHOI 365 + 10014 10993 0 4 417,144,170,172, 0,447,617,807, +,+,+,+, 626108 Satellite W-chromosome 585 chrUn_NT_465601v1 13265 14112 GGXHOI 364 + 13265 14112 0 2 418,378, 0,469, +,+, 626111 Satellite W-chromosome 585 chrUn_NT_465601v1 14498 15079 GGXHOI 381 + 14498 15079 0 2 219,348, 0,233, +,+, 626112 Satellite W-chromosome 585 chrUn_NT_465601v1 15640 16117 GGXHOI 379 + 15640 16117 0 2 357,103, 0,374, +,+, 626114 Satellite W-chromosome 585 chrUn_NT_465601v1 17146 17812 GGXHOI 340 + 17146 17812 0 2 413,210, 0,456, +,+, 626117 Satellite W-chromosome 585 chrUn_NT_465602v1 261 1331 GGXHOI 542 + 261 1331 0 3 375,165,19, 0,579,1051, +,+,+, 626119 Satellite W-chromosome 585 chrUn_NT_465602v1 1397 2475 GGXHOI 548 + 1397 2475 0 2 744,26, 0,1052, +,+, 626122 Satellite W-chromosome 585 chrUn_NT_465602v1 2545 3624 GGXHOI 560 + 2545 3624 0 2 749,19, 0,1060, +,+, 626124 Satellite W-chromosome 585 chrUn_NT_465602v1 3699 4314 GGXHOI 592 + 3699 4314 0 2 202,166, 0,449, +,+, 626126 Satellite W-chromosome 585 chrUn_NT_465602v1 4356 7033 GGXHOI 562 + 4356 7033 0 3 1277,703,23, 0,1600,2654, +,+,+, 626129 Satellite W-chromosome 585 chrUn_NT_465602v1 7311 8010 GGXHOI 562 + 7311 8010 0 2 358,18, 0,681, +,+, 626133 Satellite W-chromosome 585 chrUn_NT_465602v1 8081 9099 GGXHOI 540 + 8081 9099 0 2 643,357, 0,661, +,+, 626135 Satellite W-chromosome 585 chrUn_NT_465602v1 9216 10356 GGXHOI 500 + 9216 10356 0 2 795,142, 0,998, +,+, 626136 Satellite W-chromosome 585 chrUn_NT_465602v1 10427 11584 GGXHOI 556 + 10427 11584 0 3 217,370,148, 0,447,1009, +,+,+, 626138 Satellite W-chromosome 585 chrUn_NT_465602v1 11654 13920 GGXHOI 538 + 11654 13920 0 3 206,334,1194, 0,456,1072, +,+,+, 626141 Satellite W-chromosome 585 chrUn_NT_465602v1 15185 16161 GGXHOI 427 + 15185 16161 0 3 369,147,428, 0,382,548, +,+,+, 626145 Satellite W-chromosome 585 chrUn_NT_465602v1 17334 17853 GGXHOI 528 + 17334 17853 0 2 196,79, 0,440, +,+, 626147 Satellite W-chromosome 585 chrUn_NT_465603v1 14412 15918 GGXHOI 398 - 14412 15918 0 4 108,310,888,136, 0,126,456,1370, -,-,-,-, 626151 Satellite W-chromosome 585 chrUn_NT_465603v1 15984 17832 GGXHOI 356 - 15984 17832 0 4 232,1098,186,271, 0,244,1361,1577, -,-,-,-, 626152 Satellite W-chromosome 585 chrUn_NT_465604v1 4210 14268 GGXHOI 542 - 4210 14268 0 17 838,194,187,111,198,186,248,314,301,194,197,193,355,194,197,194,495, 0,1161,1781,2291,2898,3419,3976,4548,5051,5675,6283,6803,7253,7931,8538,9058,9563, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 626160 Satellite W-chromosome 585 chrUn_NT_465604v1 14310 16235 GGXHOI 562 - 14310 16235 0 4 272,258,194,207, 0,631,1212,1718, -,-,-,-, 626178 Satellite W-chromosome 585 chrUn_NT_465604v1 16311 16996 GGXHOI 574 - 16311 16996 0 2 19,357, 0,328, -,-, 626182 Satellite W-chromosome 585 chrUn_NT_465604v1 17062 17817 GGXHOI 544 - 17062 17817 0 2 99,363, 0,392, -,-, 626184 Satellite W-chromosome 585 chrUn_NT_465605v1 3228 3420 A-rich 325 + 3228 3420 0 2 37,97, 0,95, +,+, 626199 Low_complexity Low_complexity 585 chrUn_NT_465606v1 2634 2877 CR1-Y4 541 - 2634 2877 0 2 71,60, 0,183, -,-, 626249 LINE CR1 585 chrUn_NT_465606v1 6890 11491 CR1-F2 419 + 6890 11491 0 3 193,33,58, 0,872,4543, +,+,+, 626256 LINE CR1 585 chrUn_NT_465606v1 12694 13538 CR1-F2 382 + 12694 13538 0 3 447,80,82, 0,682,762, +,+,+, 626266 LINE CR1 585 chrUn_NT_465606v1 13134 13376 CR1-F2 445 + 13134 13376 0 3 85,77,80, 0,85,162, +,+,+, 626267 LINE CR1 585 chrUn_NT_465606v1 13792 14017 CR1-F2 407 + 13792 14017 0 3 72,75,78, 0,72,147, +,+,+, 626271 LINE CR1 585 chrUn_NT_465607v1 417 1794 GGXHOI 341 - 417 1794 0 2 1165,160, 0,1217, -,-, 626276 Satellite W-chromosome 585 chrUn_NT_465607v1 1858 6584 GGXHOI 347 - 1858 6584 0 7 101,215,652,390,1788,964,448, 0,118,375,1044,1453,3298,4278, -,-,-,-,-,-,-, 626277 Satellite W-chromosome 585 chrUn_NT_465607v1 6670 12823 GGXHOI 336 - 6670 12823 0 8 372,126,289,154,2555,133,182,2107, 0,420,567,878,1076,3680,3846,4046, -,-,-,-,-,-,-,-, 626279 Satellite W-chromosome 585 chrUn_NT_465607v1 12938 16870 GGXHOI 365 - 12938 16870 0 5 1129,931,798,760,258, 0,1141,2086,2898,3674, -,-,-,-,-, 626280 Satellite W-chromosome 585 chrUn_NT_465608v1 1679 3855 GGXHOI 510 + 1679 3855 0 2 1833,292, 0,1884, +,+, 626284 Satellite W-chromosome 585 chrUn_NT_465608v1 6468 9210 GGXHOI 588 + 6468 9210 0 3 360,1512,494, 0,548,2248, +,+,+, 626288 Satellite W-chromosome 585 chrUn_NT_465608v1 9872 10914 GGXHOI 590 + 9872 10914 0 2 360,494, 0,548, +,+, 626292 Satellite W-chromosome 585 chrUn_NT_465608v1 10980 12550 GGXHOI 588 + 10980 12550 0 2 888,494, 0,1076, +,+, 626294 Satellite W-chromosome 585 chrUn_NT_465608v1 14858 15898 GGXHOI 590 + 14858 15898 0 2 360,492, 0,548, +,+, 626298 Satellite W-chromosome 585 chrUn_NT_465609v1 1623 3344 GGXHOI 370 - 1623 3344 0 2 518,1188, 0,533, -,-, 626303 Satellite W-chromosome 585 chrUn_NT_465609v1 3494 8391 GGXHOI 375 - 3494 8391 0 7 321,508,923,420,1046,504,1054, 0,333,888,1824,2264,3323,3843, -,-,-,-,-,-,-, 626304 Satellite W-chromosome 585 chrUn_NT_465609v1 8526 10217 GGXHOI 429 - 8526 10217 0 4 491,468,64,594, 0,533,1018,1097, -,-,-,-, 626305 Satellite W-chromosome 585 chrUn_NT_465609v1 10376 13648 GGXHOI 420 - 10376 13648 0 6 84,517,1058,64,1015,409, 0,97,629,1707,1828,2863, -,-,-,-,-,-, 626306 Satellite W-chromosome 585 chrUn_NT_465609v1 13772 17441 GGXHOI 379 - 13772 17441 0 3 2184,1082,332, 0,2199,3337, -,-,-, 626307 Satellite W-chromosome 585 chrUn_NT_465610v1 1071 2163 (CGAGG)n 493 + 1071 2163 0 3 503,299,105, 0,509,987, +,+,+, 626311 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 2264 3647 (CGAGG)n 535 + 2264 3647 0 4 175,706,21,80, 0,225,1102,1303, +,+,+,+, 626314 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 4769 5464 (CGAGG)n 556 + 4769 5464 0 2 245,323, 0,372, +,+, 626321 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 5533 5941 (CGAGG)n 518 + 5533 5941 0 2 193,176, 0,232, +,+, 626323 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 6015 6429 (CGAGG)n 556 + 6015 6429 0 2 129,185, 0,229, +,+, 626325 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 6473 8203 (CGAGG)n 530 + 6473 8203 0 5 291,27,283,537,179, 0,470,677,984,1551, +,+,+,+,+, 626327 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 8421 9002 (CGAGG)n 582 + 8421 9002 0 3 179,179,179, 0,199,402, +,+,+, 626331 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 11813 12880 (CGAGG)n 513 + 11813 12880 0 3 334,298,346, 0,384,721, +,+,+, 626346 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 14029 14438 (CCTTG)n 430 + 14029 14438 0 2 189,220, 0,189, +,+, 626352 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 14373 15001 (CCTCG)n 555 + 14373 15001 0 3 194,249,185, 0,194,443, +,+,+, 626353 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 15073 16649 (CCTCG)n 524 + 15073 16649 0 5 535,258,90,22,192, 0,586,868,1349,1384, +,+,+,+,+, 626355 Simple_repeat Simple_repeat 585 chrUn_NT_465610v1 17411 17774 (CCTCG)n 612 + 17411 17774 0 2 100,76, 0,287, +,+, 626362 Simple_repeat Simple_repeat 585 chrUn_NT_465611v1 3100 5423 GGXHOI 340 - 3100 5423 0 5 268,350,610,843,177, 0,291,662,1286,2146, -,-,-,-,-, 626367 Satellite W-chromosome 585 chrUn_NT_465611v1 6275 9359 GGXHOI 352 - 6275 9359 0 4 689,923,1221,146, 0,713,1659,2938, -,-,-,-, 626369 Satellite W-chromosome 585 chrUn_NT_465611v1 9455 11671 GGXHOI 317 - 9455 11671 0 4 136,141,1071,779, 0,189,350,1437, -,-,-,-, 626370 Satellite W-chromosome 585 chrUn_NT_465611v1 11758 13834 GGXHOI 369 - 11758 13834 0 3 838,1060,143, 0,858,1933, -,-,-, 626371 Satellite W-chromosome 585 chrUn_NT_465611v1 14443 15348 GGXHOI 369 - 14443 15348 0 3 153,284,398, 0,177,507, -,-,-, 626373 Satellite W-chromosome 585 chrUn_NT_465611v1 15444 16797 GGXHOI 353 - 15444 16797 0 2 629,710, 0,643, -,-, 626374 Satellite W-chromosome 585 chrUn_NT_465612v1 1211 3816 GGXHOI 372 + 1211 3816 0 3 1038,1012,452, 0,1101,2153, +,+,+, 626378 Satellite W-chromosome 585 chrUn_NT_465612v1 3956 4998 GGXHOI 371 + 3956 4998 0 2 474,506, 0,536, +,+, 626379 Satellite W-chromosome 585 chrUn_NT_465612v1 7574 8573 GGXHOI 335 + 7574 8573 0 2 641,304, 0,695, +,+, 626383 Satellite W-chromosome 585 chrUn_NT_465613v1 7660 10134 GGLTR7-int 614 + 7660 10134 0 3 338,849,793, 0,825,1681, +,+,+, 626405 LTR ERV1 585 chrUn_NT_465613v1 10146 12569 GGERV10_LTR 848 - 10146 12569 0 2 38,41, 0,2382, -,-, 626407 LTR ERVL 585 chrUn_NT_465613v1 10313 12527 GGLTR10D-int 931 - 10313 12527 0 2 364,1847, 0,367, -,-, 626408 LTR ERVK 585 chrUn_NT_465613v1 13568 14100 (CGAGG)n 540 + 13568 14100 0 2 119,83, 0,449, +,+, 626411 Simple_repeat Simple_repeat 585 chrUn_NT_465615v1 16801 17177 GGXHOI 320 - 16801 17177 0 2 147,211, 0,165, -,-, 626435 Satellite W-chromosome 585 chrUn_NT_465616v1 780 2636 CR1-F 513 - 780 2636 0 6 206,198,155,204,204,203, 0,251,739,1161,1407,1653, -,-,-,-,-,-, 626439 LINE CR1 585 chrUn_NT_465616v1 2679 6926 CR1-F 536 - 2679 6926 0 13 212,201,155,204,204,203,197,190,201,155,204,204,203, 0,257,748,1170,1416,1662,2165,2404,2639,3130,3552,3798,4044, -,-,-,-,-,-,-,-,-,-,-,-,-, 626442 LINE CR1 585 chrUn_NT_465616v1 6969 17403 CR1-F 544 - 6969 17403 0 31 212,201,155,204,204,203,199,190,200,155,204,204,203,200,191,200,155,204,204,203,200,190,201,155,204,204,203,200,190,199,154, 0,257,748,1170,1416,1662,2165,2406,2641,3131,3553,3799,4045,4548,4790,5025,5515,5937,6183,6429,6932,7174,7409,7900,8322,8568,8814,9316,9558,9793,10280, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 626448 LINE CR1 585 chrUn_NT_465617v1 2448 9190 GGXHOI 385 - 2448 9190 0 4 1148,2946,2363,225, 0,1163,4141,6517, -,-,-,-, 626465 Satellite W-chromosome 585 chrUn_NT_465617v1 9857 12170 GGXHOI 417 - 9857 12170 0 3 686,922,658, 0,700,1655, -,-,-, 626468 Satellite W-chromosome 585 chrUn_NT_465617v1 12360 17786 GGXHOI 393 - 12360 17786 0 5 504,1840,1773,1011,184, 0,525,2382,4169,5242, -,-,-,-,-, 626469 Satellite W-chromosome 585 chrUn_NT_465619v1 2725 7069 CR1-F2 702 + 2725 7069 0 3 708,96,116, 0,4124,4228, +,+,+, 626475 LINE CR1 585 chrUn_NT_465619v1 7067 7915 Z-REP 538 + 7067 7915 0 2 441,313, 0,535, +,+, 626479 Satellite macro 585 chrUn_NT_465619v1 11985 14032 GGLTR7-int 653 - 11985 14032 0 3 33,74,1310, 0,34,737, -,-,-, 626483 LTR ERV1 585 chrUn_NT_465621v1 4026 5290 GGXHOI 393 - 4026 5290 0 2 520,682, 0,582, -,-, 626506 Satellite W-chromosome 585 chrUn_NT_465621v1 5486 9084 GGXHOI 397 - 5486 9084 0 2 1584,1953, 0,1645, -,-, 626507 Satellite W-chromosome 585 chrUn_NT_465621v1 9194 17785 GGXHOI 407 - 9194 17785 0 5 1395,1891,1539,273,3380, 0,1430,3352,4907,5211, -,-,-,-,-, 626508 Satellite W-chromosome 585 chrUn_NT_465623v1 5878 6444 CR1-X 439 + 5878 6444 0 3 169,134,221, 0,169,345, +,+,+, 626535 LINE CR1 585 chrUn_NT_465623v1 15508 16632 CR1-B2 672 - 15508 16632 0 2 899,225, 0,899, -,-, 626546 LINE CR1 585 chrUn_NT_465624v1 6170 11188 GGXHOI 535 - 6170 11188 0 11 544,123,36,296,193,372,194,296,37,80,191, 0,822,958,1223,1842,2356,3050,3640,4413,4729,4827, -,-,-,-,-,-,-,-,-,-,-, 626560 Satellite W-chromosome 585 chrUn_NT_465624v1 11265 12658 GGXHOI 508 - 11265 12658 0 2 19,1068, 0,325, -,-, 626569 Satellite W-chromosome 585 chrUn_NT_465624v1 12700 14791 GGXHOI 562 - 12700 14791 0 4 278,247,194,210, 0,723,1293,1881, -,-,-,-, 626572 Satellite W-chromosome 585 chrUn_NT_465624v1 14861 15958 GGXHOI 498 - 14861 15958 0 2 528,172, 0,925, -,-, 626576 Satellite W-chromosome 585 chrUn_NT_465624v1 16378 16779 GGXHOI 378 - 16378 16779 0 2 139,227, 0,174, -,-, 626579 Satellite W-chromosome 585 chrUn_NT_465624v1 17304 17786 GGXHOI 524 - 17304 17786 0 2 19,104, 0,378, -,-, 626581 Satellite W-chromosome 585 chrUn_NT_465625v1 420 734 (ACCCCATAGGG)n 382 + 420 734 0 2 141,115, 0,199, +,+, 626586 Satellite Satellite 585 chrUn_NT_465625v1 864 1512 (ACCCCATAGGG)n 512 + 864 1512 0 5 82,88,121,88,118, 0,109,231,415,530, +,+,+,+,+, 626588 Satellite Satellite 585 chrUn_NT_465625v1 6875 7357 (CTCTATGGGG)n 731 - 6875 7357 0 2 350,121, 0,361, -,-, 626605 Satellite Satellite 585 chrUn_NT_465625v1 7420 7698 (CTCTATGGGG)n 730 - 7420 7698 0 2 124,87, 0,191, -,-, 626607 Satellite Satellite 585 chrUn_NT_465625v1 7709 8028 (CTCTATGGGG)n 636 - 7709 8028 0 2 138,64, 0,255, -,-, 626610 Satellite Satellite 585 chrUn_NT_465625v1 10229 11357 (ACCCCATAGGG)n 634 + 10229 11357 0 3 303,358,82, 0,412,1046, +,+,+, 626613 Satellite Satellite 585 chrUn_NT_465625v1 10999 11467 (ACCCATAGGG)n 564 + 10999 11467 0 4 155,120,79,40, 0,156,297,428, +,+,+,+, 626615 Satellite Satellite 585 chrUn_NT_465625v1 11467 11655 (CTCTATGGGG)n 553 - 11467 11655 0 2 26,121, 0,67, -,-, 626617 Satellite Satellite 585 chrUn_NT_465625v1 14537 15051 (ACCCCATAGGG)n 423 + 14537 15051 0 4 158,107,106,106, 0,170,289,408, +,+,+,+, 626632 Satellite Satellite 585 chrUn_NT_465626v1 5723 8164 Z-REP 768 + 5723 8164 0 2 155,1521, 0,920, +,+, 626640 Satellite macro 585 chrUn_NT_465627v1 6153 7537 GGLTR7-int 317 - 6153 7537 0 3 277,256,100, 0,1026,1284, -,-,-, 626654 LTR ERV1 585 chrUn_NT_465627v1 8269 11102 GGERVL-B-int 709 - 8269 11102 0 2 908,1925, 0,908, -,-, 626656 LTR ERVL 585 chrUn_NT_465627v1 13629 14012 (CAAGG)n 573 + 13629 14012 0 2 182,184, 0,199, +,+, 626661 Simple_repeat Simple_repeat 585 chrUn_NT_465627v1 14542 15532 (CAGGC)n 514 + 14542 15532 0 2 166,62, 0,928, +,+, 626668 Simple_repeat Simple_repeat 585 chrUn_NT_465627v1 14708 15321 (CAAGG)n 501 + 14708 15321 0 3 228,190,195, 0,228,418, +,+,+, 626669 Simple_repeat Simple_repeat 585 chrUn_NT_465627v1 15526 16232 (CAAGG)n 622 + 15526 16232 0 2 217,138, 0,568, +,+, 626671 Simple_repeat Simple_repeat 585 chrUn_NT_465631v1 5280 12017 GGERV28_I-int 257 + 5280 12017 0 5 104,94,257,123,413, 0,4799,4909,5927,6324, +,+,+,+,+, 626691 LTR ERVK 585 chrUn_NT_465631v1 6572 7526 GGLTR4B 595 + 6572 7526 0 2 863,91, 0,863, +,+, 626693 LTR ERVL 585 chrUn_NT_465631v1 13539 17786 GGLTR7A 830 - 13539 17786 0 2 610,3637, 0,610, -,-, 626703 LTR ERV1 585 chrUn_NT_465632v1 788 4460 GGXHOI 403 + 788 4460 0 4 138,660,2695,99, 0,181,862,3573, +,+,+,+, 626705 Satellite W-chromosome 585 chrUn_NT_465632v1 4531 10166 GGXHOI 383 + 4531 10166 0 3 659,3664,1232, 0,721,4403, +,+,+, 626706 Satellite W-chromosome 585 chrUn_NT_465632v1 12013 12684 GGXHOI 328 + 12013 12684 0 2 329,319, 0,352, +,+, 626710 Satellite W-chromosome 585 chrUn_NT_465632v1 14653 17666 GGXHOI 409 - 14653 17666 0 7 59,437,245,855,528,377,391, 0,82,536,797,1663,2206,2622, -,-,-,-,-,-,-, 626713 Satellite W-chromosome 585 chrUn_NT_465633v1 609 1363 (CCTTG)n 468 + 609 1363 0 2 134,447, 0,307, +,+, 626717 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 1783 2052 (CAAGG)n 654 + 1783 2052 0 2 46,223, 0,46, +,+, 626722 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 1979 2321 (CAGGC)n 356 + 1979 2321 0 2 99,68, 0,274, +,+, 626723 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 3498 4102 (CCTTG)n 547 + 3498 4102 0 2 225,353, 0,251, +,+, 626729 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 4733 5202 (CAAGG)n 595 + 4733 5202 0 3 46,223,174, 0,46,295, +,+,+, 626735 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 5830 6149 (GCCTG)n 400 + 5830 6149 0 2 98,43, 0,276, +,+, 626739 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 6527 7064 (CAAGG)n 591 + 6527 7064 0 3 46,223,242, 0,46,295, +,+,+, 626743 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 8241 8845 (CCTTG)n 537 + 8241 8845 0 2 225,353, 0,251, +,+, 626748 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 9476 9945 (CAAGG)n 595 + 9476 9945 0 3 46,223,174, 0,46,295, +,+,+, 626754 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 10573 10892 (GCCTG)n 400 + 10573 10892 0 2 98,43, 0,276, +,+, 626758 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 11270 11740 (CAAGG)n 587 + 11270 11740 0 3 46,223,175, 0,46,295, +,+,+, 626762 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 12065 12818 (CAAGG)n 510 + 12065 12818 0 2 354,271, 0,482, +,+, 626764 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 12976 13841 (CCTTG)n 509 + 12976 13841 0 3 225,114,242, 0,250,623, +,+,+, 626767 Simple_repeat Simple_repeat 585 chrUn_NT_465633v1 15949 16481 (CAAGG)n 584 + 15949 16481 0 3 46,223,246, 0,46,286, +,+,+, 626781 Simple_repeat Simple_repeat 585 chrUn_NT_465634v1 1621 2931 GGXHOI 377 + 1621 2931 0 3 455,397,368, 0,506,942, +,+,+, 626792 Satellite W-chromosome 585 chrUn_NT_465634v1 3064 3872 GGXHOI 366 + 3064 3872 0 2 356,437, 0,371, +,+, 626793 Satellite W-chromosome 585 chrUn_NT_465634v1 4481 5689 GGXHOI 377 + 4481 5689 0 2 830,358, 0,850, +,+, 626795 Satellite W-chromosome 585 chrUn_NT_465634v1 11773 13403 GGXHOI 377 + 11773 13403 0 4 330,378,474,356, 0,344,741,1274, +,+,+,+, 626803 Satellite W-chromosome 585 chrUn_NT_465634v1 14396 15216 GGXHOI 378 + 14396 15216 0 2 403,361, 0,459, +,+, 626805 Satellite W-chromosome 585 chrUn_NT_465634v1 15670 16713 GGXHOI 372 + 15670 16713 0 3 168,404,359, 0,222,684, +,+,+, 626806 Satellite W-chromosome 585 chrUn_NT_465636v1 873 1956 GGXHOI 560 - 873 1956 0 2 538,205, 0,878, -,-, 626821 Satellite W-chromosome 585 chrUn_NT_465636v1 2045 3128 GGXHOI 560 - 2045 3128 0 2 538,205, 0,878, -,-, 626823 Satellite W-chromosome 585 chrUn_NT_465636v1 3217 4300 GGXHOI 560 - 3217 4300 0 2 538,205, 0,878, -,-, 626825 Satellite W-chromosome 585 chrUn_NT_465636v1 4389 5472 GGXHOI 560 - 4389 5472 0 2 538,205, 0,878, -,-, 626827 Satellite W-chromosome 585 chrUn_NT_465636v1 5561 14848 GGXHOI 550 - 5561 14848 0 13 539,832,832,832,491,60,491,60,491,60,491,59,205, 0,879,2051,3223,4395,5167,5567,6339,6739,7511,7911,8683,9082, -,-,-,-,-,-,-,-,-,-,-,-,-, 626829 Satellite W-chromosome 585 chrUn_NT_465636v1 14937 16020 GGXHOI 556 - 14937 16020 0 2 538,204, 0,879, -,-, 626842 Satellite W-chromosome 585 chrUn_NT_465636v1 16109 17193 GGXHOI 546 - 16109 17193 0 2 540,203, 0,881, -,-, 626844 Satellite W-chromosome 585 chrUn_NT_465636v1 17280 17764 GGXHOI 554 - 17280 17764 0 2 193,11, 0,473, -,-, 626846 Satellite W-chromosome 585 chrUn_NT_465637v1 9572 11179 GGXHOI 365 - 9572 11179 0 2 461,1089, 0,518, -,-, 626857 Satellite W-chromosome 585 chrUn_NT_465637v1 11282 13467 GGXHOI 382 - 11282 13467 0 2 1084,1038, 0,1147, -,-, 626858 Satellite W-chromosome 585 chrUn_NT_465638v1 1178 2228 GGXHOI 378 - 1178 2228 0 2 515,472, 0,578, -,-, 626868 Satellite W-chromosome 585 chrUn_NT_465638v1 2982 4524 GGXHOI 377 - 2982 4524 0 2 1007,472, 0,1070, -,-, 626870 Satellite W-chromosome 585 chrUn_NT_465638v1 6919 7970 GGXHOI 378 - 6919 7970 0 2 516,472, 0,579, -,-, 626874 Satellite W-chromosome 585 chrUn_NT_465638v1 8069 9120 GGXHOI 378 - 8069 9120 0 2 516,472, 0,579, -,-, 626875 Satellite W-chromosome 585 chrUn_NT_465638v1 9219 10270 GGXHOI 378 - 9219 10270 0 2 516,472, 0,579, -,-, 626876 Satellite W-chromosome 585 chrUn_NT_465638v1 11024 14327 GGXHOI 388 - 11024 14327 0 3 1009,1085,1083, 0,1072,2220, -,-,-, 626878 Satellite W-chromosome 585 chrUn_NT_465638v1 16701 17634 GGXHOI 281 - 16701 17634 0 2 724,166, 0,767, -,-, 626882 Satellite W-chromosome 585 chrUn_NT_465639v1 566 5015 CR1-D2 468 - 566 5015 0 2 305,809, 0,3640, -,-, 626884 LINE CR1 585 chrUn_NT_465639v1 1577 4220 CR1-D 658 - 1577 4220 0 3 1638,897,108, 0,1638,2535, -,-,-, 626886 LINE CR1 585 chrUn_NT_465639v1 5005 5230 Char12Mar1_GG 564 - 5005 5230 0 2 73,152, 0,73, -,-, 626887 DNA hAT-Charlie 585 chrUn_NT_465640v1 2761 7744 GGXHOI 581 - 2761 7744 0 8 405,261,156,369,148,456,270,661, 0,885,1161,1688,2068,2890,4037,4322, -,-,-,-,-,-,-,-, 626900 Satellite W-chromosome 585 chrUn_NT_465640v1 7933 10525 GGXHOI 568 - 7933 10525 0 5 263,136,147,136,787, 0,608,793,1614,1805, -,-,-,-,-, 626906 Satellite W-chromosome 585 chrUn_NT_465640v1 10551 17738 GGXHOI 558 - 10551 17738 0 12 232,287,148,119,69,51,364,257,259,149,574,250, 0,858,1156,1990,2126,3075,3168,4089,4791,5100,5806,6937, -,-,-,-,-,-,-,-,-,-,-,-, 626910 Satellite W-chromosome 585 chrUn_NT_465641v1 498 1164 CR1-Y4 569 + 498 1164 0 2 35,42, 0,624, +,+, 626923 LINE CR1 585 chrUn_NT_465642v1 12125 12853 (CATGC)n 480 + 12125 12853 0 2 139,484, 0,244, +,+, 626966 Simple_repeat Simple_repeat 585 chrUn_NT_465642v1 12525 13077 (CTATG)n 366 + 12525 13077 0 2 268,133, 0,419, +,+, 626968 Simple_repeat Simple_repeat 585 chrUn_NT_465642v1 14365 15134 (GGATG)n 339 + 14365 15134 0 2 576,180, 0,589, +,+, 626974 Simple_repeat Simple_repeat 585 chrUn_NT_465643v1 11022 13478 GGLTR7-int 621 + 11022 13478 0 3 338,851,793, 0,804,1663, +,+,+, 626987 LTR ERV1 585 chrUn_NT_465643v1 13490 15910 GGERV10_LTR 848 - 13490 15910 0 2 38,41, 0,2379, -,-, 626989 LTR ERVL 585 chrUn_NT_465643v1 13655 15868 GGLTR10D-int 936 - 13655 15868 0 2 362,1848, 0,365, -,-, 626990 LTR ERVK 585 chrUn_NT_465643v1 15921 17050 (CGAGG)n 558 + 15921 17050 0 2 496,608, 0,521, +,+, 626991 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 1851 2835 (CGAGG)n 571 + 1851 2835 0 5 182,180,145,77,185, 0,200,380,689,799, +,+,+,+,+, 627017 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 3449 4201 (CGAGG)n 576 + 3449 4201 0 3 215,218,298, 0,215,454, +,+,+, 627023 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 4442 5108 (CGAGG)n 576 + 4442 5108 0 2 405,21, 0,645, +,+, 627025 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 5254 6804 (CGAGG)n 584 + 5254 6804 0 4 371,234,294,431, 0,406,825,1119, +,+,+,+, 627029 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 6864 8060 (CGAGG)n 533 + 6864 8060 0 4 560,179,183,184, 0,575,795,1012, +,+,+,+, 627032 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 8158 8809 (CGAGG)n 585 + 8158 8809 0 3 186,141,121, 0,211,530, +,+,+, 627033 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 9264 11384 (CGAGG)n 548 + 9264 11384 0 6 356,556,206,49,169,345, 0,385,1119,1506,1573,1775, +,+,+,+,+,+, 627038 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 11437 12219 (CGAGG)n 558 + 11437 12219 0 2 517,91, 0,691, +,+, 627042 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 12245 13078 (CGAGG)n 542 + 12245 13078 0 2 373,280, 0,553, +,+, 627045 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 13582 13980 (CGAGG)n 556 + 13582 13980 0 2 179,177, 0,221, +,+, 627051 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 14699 15259 (CGAGG)n 512 + 14699 15259 0 2 182,364, 0,196, +,+, 627057 Simple_repeat Simple_repeat 585 chrUn_NT_465646v1 15661 16354 (CGAGG)n 580 + 15661 16354 0 2 474,179, 0,514, +,+, 627061 Simple_repeat Simple_repeat 585 chrUn_NT_465647v1 9986 11716 GGERVL-A-int 751 + 9986 11716 0 2 457,1273, 0,457, +,+, 627072 LTR ERVL 585 chrUn_NT_465648v1 4016 4782 GGXHOI 415 + 4016 4782 0 2 576,178, 0,588, +,+, 627078 Satellite W-chromosome 585 chrUn_NT_465648v1 8572 10147 GGXHOI 392 + 8572 10147 0 2 1350,196, 0,1379, +,+, 627081 Satellite W-chromosome 585 chrUn_NT_465648v1 10499 12401 GGXHOI 351 + 10499 12401 0 3 840,872,147, 0,859,1755, +,+,+, 627082 Satellite W-chromosome 585 chrUn_NT_465648v1 13264 17218 GGXHOI 406 + 13264 17218 0 5 1083,279,932,743,745, 0,1125,1450,2424,3209, +,+,+,+,+, 627085 Satellite W-chromosome 585 chrUn_NT_465650v1 2040 2171 GA-rich 332 + 2040 2171 0 2 46,55, 0,76, +,+, 627101 Low_complexity Low_complexity 585 chrUn_NT_465650v1 6521 6666 GA-rich 300 + 6521 6666 0 2 43,45, 0,100, +,+, 627107 Low_complexity Low_complexity 585 chrUn_NT_465650v1 11151 11294 GA-rich 302 + 11151 11294 0 2 43,40, 0,103, +,+, 627115 Low_complexity Low_complexity 585 chrUn_NT_465651v1 9919 12889 CR1-H 671 - 9919 12889 0 4 138,478,163,294, 0,144,2513,2676, -,-,-,-, 627131 LINE CR1 585 chrUn_NT_465652v1 9281 9755 A-rich 570 + 9281 9755 0 2 396,38, 0,436, +,+, 627170 Low_complexity Low_complexity 585 chrUn_NT_465655v1 696 1511 GGXHOI 312 + 696 1511 0 2 279,481, 0,334, +,+, 627227 Satellite W-chromosome 585 chrUn_NT_465655v1 2597 3619 GGXHOI 342 + 2597 3619 0 2 264,714, 0,308, +,+, 627230 Satellite W-chromosome 585 chrUn_NT_465655v1 4725 6671 GGXHOI 370 + 4725 6671 0 2 1043,841, 0,1105, +,+, 627232 Satellite W-chromosome 585 chrUn_NT_465655v1 7990 9610 GGXHOI 391 + 7990 9610 0 2 1043,515, 0,1105, +,+, 627235 Satellite W-chromosome 585 chrUn_NT_465655v1 11297 12125 GGXHOI 380 + 11297 12125 0 2 172,633, 0,195, +,+, 627239 Satellite W-chromosome 585 chrUn_NT_465656v1 3042 5502 GGLTR7-int 602 + 3042 5502 0 2 336,794, 0,1666, +,+, 627251 LTR ERV1 585 chrUn_NT_465656v1 5514 7931 GGERV10_LTR 874 - 5514 7931 0 2 38,41, 0,2376, -,-, 627254 LTR ERVL 585 chrUn_NT_465656v1 5682 7889 GGLTR10D-int 919 - 5682 7889 0 2 363,1841, 0,366, -,-, 627255 LTR ERVK 585 chrUn_NT_465656v1 7928 8418 (CGAGG)n 615 + 7928 8418 0 2 387,92, 0,398, +,+, 627256 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 8549 9570 (CGAGG)n 538 + 8549 9570 0 3 358,242,175, 0,419,846, +,+,+, 627258 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 9773 10386 (CGAGG)n 551 + 9773 10386 0 3 199,46,177, 0,377,436, +,+,+, 627261 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 10576 10914 (CGAGG)n 548 + 10576 10914 0 2 146,177, 0,161, +,+, 627263 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 11061 12356 (CGAGG)n 490 + 11061 12356 0 2 924,187, 0,1108, +,+, 627265 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 12472 13008 (CGAGG)n 532 + 12472 13008 0 2 179,313, 0,223, +,+, 627268 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 13262 13637 (CGAGG)n 536 + 13262 13637 0 2 181,194, 0,181, +,+, 627271 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 13866 14563 (CGAGG)n 551 + 13866 14563 0 2 422,262, 0,435, +,+, 627273 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 15684 16389 (CGAGG)n 516 + 15684 16389 0 2 336,356, 0,349, +,+, 627276 Simple_repeat Simple_repeat 585 chrUn_NT_465656v1 16518 17228 (CGAGG)n 519 + 16518 17228 0 2 351,315, 0,395, +,+, 627279 Simple_repeat Simple_repeat 585 chrUn_NT_465658v1 14109 16836 CR1-D 631 + 14109 16836 0 3 111,1128,1272, 0,111,1455, +,+,+, 627293 LINE CR1 585 chrUn_NT_465660v1 732 5452 GGXHOI 421 - 732 5452 0 6 642,2475,146,987,147,249, 0,657,3145,3302,4309,4471, -,-,-,-,-,-, 627301 Satellite W-chromosome 585 chrUn_NT_465660v1 5538 8046 GGXHOI 389 - 5538 8046 0 3 1914,145,407, 0,1938,2101, -,-,-, 627302 Satellite W-chromosome 585 chrUn_NT_465660v1 9179 12034 GGXHOI 409 - 9179 12034 0 4 294,561,146,1790, 0,335,908,1065, -,-,-,-, 627305 Satellite W-chromosome 585 chrUn_NT_465660v1 12107 13101 GGXHOI 416 - 12107 13101 0 3 487,146,337, 0,500,657, -,-,-, 627306 Satellite W-chromosome 585 chrUn_NT_465660v1 13185 15709 GGXHOI 405 - 13185 15709 0 3 438,1722,334, 0,453,2190, -,-,-, 627307 Satellite W-chromosome 585 chrUn_NT_465660v1 15795 17623 GGXHOI 391 - 15795 17623 0 3 645,858,294, 0,660,1534, -,-,-, 627308 Satellite W-chromosome 585 chrUn_NT_465661v1 14491 15761 CR1-H 585 + 14491 15761 0 2 1159,111, 0,1159, +,+, 627325 LINE CR1 585 chrUn_NT_465663v1 3580 4129 (TTAGGG)n 675 + 3580 4129 0 2 185,351, 0,198, +,+, 627334 Simple_repeat Simple_repeat 585 chrUn_NT_465663v1 12673 13165 GGLTR3F1 839 + 12673 13165 0 2 230,203, 0,289, +,+, 627344 LTR ERVL 585 chrUn_NT_465664v1 5728 6383 (CCTTG)n 602 + 5728 6383 0 3 145,96,56, 0,324,599, +,+,+, 627358 Simple_repeat Simple_repeat 585 chrUn_NT_465664v1 6874 7264 (GCCTG)n 505 + 6874 7264 0 2 179,211, 0,179, +,+, 627364 Simple_repeat Simple_repeat 585 chrUn_NT_465664v1 7345 8000 (GCCTG)n 504 + 7345 8000 0 2 456,188, 0,467, +,+, 627366 Simple_repeat Simple_repeat 585 chrUn_NT_465664v1 8082 8702 (GCCTG)n 540 + 8082 8702 0 3 160,60,34, 0,343,586, +,+,+, 627368 Simple_repeat Simple_repeat 585 chrUn_NT_465664v1 14638 16016 GGLTR7-int 339 + 14638 16016 0 3 101,210,279, 0,128,1099, +,+,+, 627377 LTR ERV1 585 chrUn_NT_465666v1 12353 14376 GGLTR7-int 601 + 12353 14376 0 3 1279,76,33, 0,1913,1990, +,+,+, 627397 LTR ERV1 585 chrUn_NT_465667v1 2355 3968 GGXHOI 349 - 2355 3968 0 5 323,126,132,676,278, 0,358,499,648,1335, -,-,-,-,-, 627403 Satellite W-chromosome 585 chrUn_NT_465667v1 4352 10071 GGXHOI 428 - 4352 10071 0 4 3453,558,1425,225, 0,3469,4045,5494, -,-,-,-, 627405 Satellite W-chromosome 585 chrUn_NT_465667v1 10207 17598 GGXHOI 415 - 10207 17598 0 4 509,3479,2694,662, 0,521,4016,6729, -,-,-,-, 627406 Satellite W-chromosome 585 chrUn_NT_465671v1 2825 5308 GGERVL-B-int 773 + 2825 5308 0 3 316,1255,912, 0,316,1571, +,+,+, 627446 LTR ERVL 585 chrUn_NT_465671v1 6045 7442 GGLTR7-int 301 + 6045 7442 0 3 101,315,281, 0,103,1116, +,+,+, 627448 LTR ERV1 585 chrUn_NT_465673v1 15184 16942 GGERVL-A-int 755 + 15184 16942 0 2 457,1301, 0,457, +,+, 627473 LTR ERVL 585 chrUn_NT_465674v1 4475 5752 CR1-H 519 + 4475 5752 0 2 1158,119, 0,1158, +,+, 627481 LINE CR1 585 chrUn_NT_465674v1 7605 8228 CR1-H 679 + 7605 8228 0 2 478,139, 0,484, +,+, 627484 LINE CR1 585 chrUn_NT_465677v1 4006 4632 CR1-H 687 + 4006 4632 0 2 469,138, 0,488, +,+, 627547 LINE CR1 585 chrUn_NT_465677v1 16288 16743 CR1-H 669 + 16288 16743 0 2 297,158, 0,297, +,+, 627558 LINE CR1 585 chrUn_NT_465678v1 5133 6519 GGERVL18-int 750 - 5133 6519 0 2 118,1268, 0,118, -,-, 627563 LTR ERVL 585 chrUn_NT_465678v1 7635 11911 GGLTR3F1 766 + 7635 11911 0 2 472,3802, 0,474, +,+, 627565 LTR ERVL 585 chrUn_NT_465678v1 12225 13041 GGLTR7-int 737 - 12225 13041 0 3 353,255,192, 0,353,624, -,-,-, 627566 LTR ERV1 585 chrUn_NT_465678v1 13611 17478 GGERV28_I-int 124 - 13611 17478 0 2 3285,300, 0,3567, -,-, 627567 LTR ERVK 585 chrUn_NT_465679v1 3768 7776 GGXHOI 363 + 3768 7776 0 5 637,425,1216,147,1469, 0,656,1106,2365,2539, +,+,+,+,+, 627573 Satellite W-chromosome 585 chrUn_NT_465679v1 8846 9701 GGXHOI 308 + 8846 9701 0 2 585,230, 0,625, +,+, 627575 Satellite W-chromosome 585 chrUn_NT_465679v1 12775 14937 GGXHOI 408 + 12775 14937 0 2 600,1546, 0,616, +,+, 627577 Satellite W-chromosome 585 chrUn_NT_465679v1 15030 17506 GGXHOI 384 + 15030 17506 0 2 2287,151, 0,2325, +,+, 627578 Satellite W-chromosome 585 chrUn_NT_465680v1 6140 14184 GGXHOI 403 - 6140 14184 0 7 1280,2628,1302,178,1094,178,1253, 0,1295,3939,5259,5469,6581,6791, -,-,-,-,-,-,-, 627581 Satellite W-chromosome 585 chrUn_NT_465680v1 14279 17584 GGXHOI 402 - 14279 17584 0 5 765,236,839,435,951, 0,779,1034,1887,2354, -,-,-,-,-, 627582 Satellite W-chromosome 585 chrUn_NT_465682v1 1324 6940 GGXHOI 313 - 1324 6940 0 5 106,885,1447,2942,108, 0,149,1055,2518,5508, -,-,-,-,-, 627591 Satellite W-chromosome 585 chrUn_NT_465682v1 7018 8227 GGXHOI 356 - 7018 8227 0 2 1022,173, 0,1036, -,-, 627592 Satellite W-chromosome 585 chrUn_NT_465682v1 8333 9448 GGXHOI 330 - 8333 9448 0 2 418,682, 0,433, -,-, 627593 Satellite W-chromosome 585 chrUn_NT_465682v1 9735 12311 GGXHOI 354 - 9735 12311 0 4 570,609,187,1117, 0,620,1241,1459, -,-,-,-, 627594 Satellite W-chromosome 585 chrUn_NT_465682v1 14476 15783 GGXHOI 329 - 14476 15783 0 4 368,161,333,366, 0,386,564,941, -,-,-,-, 627598 Satellite W-chromosome 585 chrUn_NT_465682v1 15910 17564 GGXHOI 333 - 15910 17564 0 3 686,363,540, 0,734,1114, -,-,-, 627599 Satellite W-chromosome 585 chrUn_NT_465683v1 2654 6321 GGXHOI 340 - 2654 6321 0 4 252,249,1357,1755, 0,268,533,1912, -,-,-,-, 627601 Satellite W-chromosome 585 chrUn_NT_465683v1 6406 7190 GGXHOI 339 - 6406 7190 0 2 108,660, 0,124, -,-, 627602 Satellite W-chromosome 585 chrUn_NT_465683v1 7511 17460 GGXHOI 383 - 7511 17460 0 9 2618,484,2621,261,509,1279,181,1121,700, 0,2634,3168,5801,6078,6610,7912,8116,9249, -,-,-,-,-,-,-,-,-, 627603 Satellite W-chromosome 585 chrUn_NT_465685v1 1844 2835 GGXHOI 416 - 1844 2835 0 3 561,148,248, 0,580,743, -,-,-, 627623 Satellite W-chromosome 585 chrUn_NT_465685v1 4353 4969 GGXHOI 377 - 4353 4969 0 2 100,490, 0,126, -,-, 627625 Satellite W-chromosome 585 chrUn_NT_465685v1 5053 7525 GGXHOI 422 - 5053 7525 0 3 2049,146,253, 0,2062,2219, -,-,-, 627626 Satellite W-chromosome 585 chrUn_NT_465685v1 7673 10155 GGXHOI 372 - 7673 10155 0 2 633,1837, 0,645, -,-, 627627 Satellite W-chromosome 585 chrUn_NT_465685v1 10265 11207 GGXHOI 398 - 10265 11207 0 3 301,284,333, 0,313,609, -,-,-, 627628 Satellite W-chromosome 585 chrUn_NT_465685v1 11291 13823 GGXHOI 390 - 11291 13823 0 2 2100,412, 0,2120, -,-, 627629 Satellite W-chromosome 585 chrUn_NT_465685v1 15929 16340 GGXHOI 414 - 15929 16340 0 2 147,249, 0,162, -,-, 627634 Satellite W-chromosome 585 chrUn_NT_465686v1 1441 2127 (CAAGG)n 530 + 1441 2127 0 3 290,201,195, 0,290,491, +,+,+, 627643 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 2152 2575 (CCTTG)n 485 + 2152 2575 0 2 174,223, 0,200, +,+, 627644 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 3238 3863 (CAAGG)n 537 + 3238 3863 0 2 374,225, 0,400, +,+, 627651 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 4044 4784 (CCTTG)n 520 + 4044 4784 0 3 144,178,54, 0,338,686, +,+,+, 627653 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 5040 5531 (CCTTG)n 479 + 5040 5531 0 2 242,223, 0,268, +,+, 627657 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 6294 6878 (CAAGG)n 523 + 6294 6878 0 3 188,201,195, 0,188,389, +,+,+, 627663 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 6903 7326 (CCTTG)n 485 + 6903 7326 0 2 174,223, 0,200, +,+, 627664 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 7990 8615 (CAAGG)n 537 + 7990 8615 0 2 374,225, 0,400, +,+, 627671 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 8796 9536 (CCTTG)n 520 + 8796 9536 0 2 516,54, 0,686, +,+, 627673 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 9792 10283 (CCTTG)n 479 + 9792 10283 0 2 242,223, 0,268, +,+, 627677 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 10707 11434 (CAAGG)n 536 + 10707 11434 0 3 139,187,221, 0,319,506, +,+,+, 627681 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 11711 12076 (CCTTG)n 508 + 11711 12076 0 2 178,174, 0,191, +,+, 627685 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 12969 13354 (CAAGG)n 519 + 12969 13354 0 2 136,223, 0,162, +,+, 627691 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 13377 14275 (CCTTG)n 484 + 13377 14275 0 2 624,97, 0,801, +,+, 627692 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 14531 15021 (CCTTG)n 474 + 14531 15021 0 2 242,223, 0,267, +,+, 627696 Simple_repeat Simple_repeat 585 chrUn_NT_465686v1 15697 16395 (CAAGG)n 507 + 15697 16395 0 3 166,177,297, 0,179,401, +,+,+, 627702 Simple_repeat Simple_repeat 585 chrUn_NT_465687v1 1844 7290 GGXHOI 397 + 1844 7290 0 10 1046,339,536,587,494,397,688,439,359,359, 0,1102,1456,2007,2617,3131,3547,4254,4713,5087, +,+,+,+,+,+,+,+,+,+, 627709 Satellite W-chromosome 585 chrUn_NT_465687v1 7390 13120 GGXHOI 413 + 7390 13120 0 12 234,480,359,728,440,396,650,359,729,440,359,359, 0,249,749,1123,1870,2330,2745,3415,3789,4537,4997,5371, +,+,+,+,+,+,+,+,+,+,+,+, 627710 Satellite W-chromosome 585 chrUn_NT_465687v1 13344 17161 GGXHOI 389 + 13344 17161 0 6 604,392,568,140,1369,614, 0,624,1035,1617,1814,3203, +,+,+,+,+,+, 627711 Satellite W-chromosome 585 chrUn_NT_465688v1 15343 17170 GGXHOI 410 - 15343 17170 0 4 155,265,716,596, 0,202,482,1231, -,-,-,-, 627714 Satellite W-chromosome 585 chrUn_NT_465689v1 10722 11349 CR1-H 692 - 10722 11349 0 2 139,469, 0,158, -,-, 627726 LINE CR1 585 chrUn_NT_465689v1 13273 14542 CR1-H 585 - 13273 14542 0 2 115,1154, 0,115, -,-, 627730 LINE CR1 585 chrUn_NT_465690v1 8998 9310 GGXHOI 333 - 8998 9310 0 2 128,142, 0,170, -,-, 627735 Satellite W-chromosome 585 chrUn_NT_465690v1 9920 10418 GGXHOI 292 - 9920 10418 0 2 338,129, 0,369, -,-, 627737 Satellite W-chromosome 585 chrUn_NT_465690v1 10526 11668 GGXHOI 371 - 10526 11668 0 2 605,524, 0,618, -,-, 627738 Satellite W-chromosome 585 chrUn_NT_465690v1 11747 15893 GGXHOI 369 - 11747 15893 0 4 172,2789,881,244, 0,194,3006,3902, -,-,-,-, 627739 Satellite W-chromosome 585 chrUn_NT_465690v1 16553 16892 GGXHOI 300 - 16553 16892 0 2 127,196, 0,143, -,-, 627741 Satellite W-chromosome 585 chrUn_NT_465690v1 16965 17548 GGXHOI 328 - 16965 17548 0 3 174,175,204, 0,190,379, -,-,-, 627742 Satellite W-chromosome 585 chrUn_NT_465692v1 2591 5125 GGXHOI 390 - 2591 5125 0 3 1323,849,332, 0,1338,2202, -,-,-, 627749 Satellite W-chromosome 585 chrUn_NT_465692v1 5207 6191 GGXHOI 397 - 5207 6191 0 2 475,488, 0,496, -,-, 627750 Satellite W-chromosome 585 chrUn_NT_465692v1 6274 7260 GGXHOI 412 - 6274 7260 0 3 481,145,333, 0,493,653, -,-,-, 627751 Satellite W-chromosome 585 chrUn_NT_465692v1 8295 9421 GGXHOI 369 - 8295 9421 0 2 187,923, 0,203, -,-, 627753 Satellite W-chromosome 585 chrUn_NT_465692v1 9640 11415 GGXHOI 395 - 9640 11415 0 3 789,631,330, 0,802,1445, -,-,-, 627754 Satellite W-chromosome 585 chrUn_NT_465692v1 11496 12477 GGXHOI 396 - 11496 12477 0 3 552,148,247, 0,572,734, -,-,-, 627755 Satellite W-chromosome 585 chrUn_NT_465692v1 14321 14901 GGXHOI 350 - 14321 14901 0 2 148,412, 0,168, -,-, 627758 Satellite W-chromosome 585 chrUn_NT_465692v1 14985 17510 GGXHOI 370 - 14985 17510 0 3 1523,265,689, 0,1554,1836, -,-,-, 627759 Satellite W-chromosome 585 chrUn_NT_465693v1 3337 4901 GGXHOI 371 - 3337 4901 0 2 1034,467, 0,1097, -,-, 627765 Satellite W-chromosome 585 chrUn_NT_465694v1 1575 2009 (CAAGG)n 571 + 1575 2009 0 2 179,235, 0,199, +,+, 627785 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 2085 2504 (CCTTG)n 419 + 2085 2504 0 2 172,206, 0,213, +,+, 627786 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 2975 3786 (CAAGG)n 463 + 2975 3786 0 3 194,373,222, 0,194,589, +,+,+, 627790 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 3860 4709 (CCTTG)n 521 + 3860 4709 0 3 60,404,54, 0,109,795, +,+,+, 627791 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 5033 5454 (CCTTG)n 475 + 5033 5454 0 2 172,223, 0,198, +,+, 627795 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 6313 6826 (CAAGG)n 570 + 6313 6826 0 2 161,85, 0,428, +,+, 627802 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 6825 7248 (CCTTG)n 489 + 6825 7248 0 2 174,223, 0,200, +,+, 627804 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 7677 8538 (CAAGG)n 500 + 7677 8538 0 3 193,373,225, 0,237,636, +,+,+, 627808 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 8719 9459 (CCTTG)n 520 + 8719 9459 0 2 404,54, 0,686, +,+, 627810 Simple_repeat Simple_repeat 585 chrUn_NT_465694v1 11150 12694 GGXHOI 387 + 11150 12694 0 2 472,1009, 0,535, +,+, 627816 Satellite W-chromosome 585 chrUn_NT_465694v1 14594 16742 GGXHOI 373 + 14594 16742 0 3 472,1085,473, 0,535,1675, +,+,+, 627819 Satellite W-chromosome 585 chrUn_NT_465695v1 581 2125 GGXHOI 387 + 581 2125 0 2 472,1009, 0,535, +,+, 627822 Satellite W-chromosome 585 chrUn_NT_465695v1 2251 2945 GGXHOI 320 + 2251 2945 0 2 104,542, 0,152, +,+, 627823 Satellite W-chromosome 585 chrUn_NT_465695v1 6107 7224 GGXHOI 350 + 6107 7224 0 2 730,363, 0,754, +,+, 627828 Satellite W-chromosome 585 chrUn_NT_465696v1 6702 6845 CR1-C 786 - 6702 6845 0 2 28,46, 0,97, -,-, 627847 LINE CR1 585 chrUn_NT_465696v1 6944 9032 CR1-C 721 - 6944 9032 0 5 29,45,43,45,47, 0,1353,1603,1742,2041, -,-,-,-,-, 627848 LINE CR1 585 chrUn_NT_465697v1 13676 15420 GGERVL-A-int 726 - 13676 15420 0 2 1283,461, 0,1283, -,-, 627855 LTR ERVL 585 chrUn_NT_465698v1 3171 17456 GGXHOI 376 + 3171 17456 0 4 7309,1659,3646,1529, 0,7327,9048,12756, +,+,+,+, 627862 Satellite W-chromosome 585 chrUn_NT_465699v1 1078 1794 GGXHOI 363 + 1078 1794 0 3 346,195,148, 0,361,568, +,+,+, 627864 Satellite W-chromosome 585 chrUn_NT_465699v1 2289 3067 GGXHOI 377 + 2289 3067 0 2 492,264, 0,514, +,+, 627866 Satellite W-chromosome 585 chrUn_NT_465699v1 5804 8436 GGXHOI 392 + 5804 8436 0 5 415,1149,141,517,276, 0,458,1622,1783,2356, +,+,+,+,+, 627871 Satellite W-chromosome 585 chrUn_NT_465699v1 10114 11669 GGXHOI 385 + 10114 11669 0 3 775,384,361, 0,790,1194, +,+,+, 627874 Satellite W-chromosome 585 chrUn_NT_465699v1 11734 12821 GGXHOI 387 + 11734 12821 0 2 705,362, 0,725, +,+, 627875 Satellite W-chromosome 585 chrUn_NT_465699v1 13065 13796 GGXHOI 362 + 13065 13796 0 2 413,263, 0,468, +,+, 627876 Satellite W-chromosome 585 chrUn_NT_465699v1 13880 16232 GGXHOI 373 + 13880 16232 0 3 848,564,861, 0,867,1491, +,+,+, 627877 Satellite W-chromosome 585 chrUn_NT_465700v1 1255 1625 GGXHOI 366 + 1255 1625 0 2 142,212, 0,158, +,+, 627880 Satellite W-chromosome 585 chrUn_NT_465700v1 1717 11586 GGXHOI 413 + 1717 11586 0 6 138,2285,2127,752,2275,2115, 0,163,2494,4681,5456,7754, +,+,+,+,+,+, 627881 Satellite W-chromosome 585 chrUn_NT_465700v1 12691 14486 GGXHOI 384 + 12691 14486 0 4 267,976,280,185, 0,286,1317,1610, +,+,+,+, 627883 Satellite W-chromosome 585 chrUn_NT_465700v1 14583 17463 GGXHOI 392 + 14583 17463 0 4 923,71,993,837, 0,939,1024,2043, +,+,+,+, 627884 Satellite W-chromosome 585 chrUn_NT_465701v1 8524 8661 CR1-E 638 + 8524 8661 0 2 49,58, 0,79, +,+, 627904 LINE CR1 585 chrUn_NT_465704v1 5876 6723 GGXHOI 414 - 5876 6723 0 2 142,659, 0,188, -,-, 627940 Satellite W-chromosome 585 chrUn_NT_465704v1 6836 8007 GGXHOI 322 - 6836 8007 0 5 173,178,155,117,420, 0,194,413,619,751, -,-,-,-,-, 627941 Satellite W-chromosome 585 chrUn_NT_465704v1 8135 10552 GGXHOI 397 - 8135 10552 0 3 604,1125,626, 0,630,1791, -,-,-, 627942 Satellite W-chromosome 585 chrUn_NT_465704v1 10645 11484 GGXHOI 325 - 10645 11484 0 2 142,686, 0,153, -,-, 627943 Satellite W-chromosome 585 chrUn_NT_465704v1 11561 12186 GGXHOI 385 - 11561 12186 0 2 273,338, 0,287, -,-, 627945 Satellite W-chromosome 585 chrUn_NT_465704v1 12251 13066 GGXHOI 331 - 12251 13066 0 2 414,384, 0,431, -,-, 627946 Satellite W-chromosome 585 chrUn_NT_465704v1 13165 15962 GGXHOI 343 - 13165 15962 0 7 717,279,166,525,498,209,202, 0,738,1060,1244,1782,2327,2595, -,-,-,-,-,-,-, 627947 Satellite W-chromosome 585 chrUn_NT_465704v1 16634 17503 GGXHOI 380 - 16634 17503 0 3 138,420,207, 0,180,662, -,-,-, 627950 Satellite W-chromosome 585 chrUn_NT_465705v1 11886 12343 CR1-H 677 + 11886 12343 0 2 296,161, 0,296, +,+, 627961 LINE CR1 585 chrUn_NT_465705v1 14860 15457 CR1-H 573 + 14860 15457 0 2 456,139, 0,458, +,+, 627966 LINE CR1 585 chrUn_NT_465707v1 256 569 (ACCCCATAGGG)n 333 + 256 569 0 2 152,127, 0,186, +,+, 627985 Satellite Satellite 585 chrUn_NT_465707v1 9739 10141 (CTCTATGGGG)n 599 + 9739 10141 0 3 120,121,122, 0,144,280, +,+,+, 627990 Satellite Satellite 585 chrUn_NT_465707v1 11488 11811 (ACCCATAGAG)n 551 - 11488 11811 0 2 119,193, 0,130, -,-, 627993 Satellite Satellite 585 chrUn_NT_465707v1 12266 12602 (ACCCATAGAG)n 557 - 12266 12602 0 2 121,215, 0,121, -,-, 627995 Satellite Satellite 585 chrUn_NT_465707v1 12709 13603 (ACCCATAGAG)n 581 - 12709 13603 0 5 254,119,157,148,135, 0,297,416,599,759, -,-,-,-,-, 627996 Satellite Satellite 585 chrUn_NT_465707v1 13880 14220 (ACCCCATAGGG)n 411 - 13880 14220 0 2 121,176, 0,164, -,-, 627998 Satellite Satellite 585 chrUn_NT_465707v1 14706 15172 (ACCCATAGAG)n 581 - 14706 15172 0 3 119,121,122, 0,162,344, -,-,-, 628000 Satellite Satellite 585 chrUn_NT_465707v1 15566 15840 (ACCCCATAGGG)n 757 - 15566 15840 0 2 116,120, 0,154, -,-, 628003 Satellite Satellite 585 chrUn_NT_465707v1 15906 16201 (ACCCCATAGGG)n 644 - 15906 16201 0 2 139,118, 0,177, -,-, 628004 Satellite Satellite 585 chrUn_NT_465707v1 16358 16662 (ACCCCATAGGG)n 500 - 16358 16662 0 2 140,41, 0,263, -,-, 628006 Satellite Satellite 585 chrUn_NT_465708v1 1544 2084 (CGAGG)n 541 + 1544 2084 0 2 349,177, 0,363, +,+, 628018 Simple_repeat Simple_repeat 585 chrUn_NT_465708v1 2862 3810 (CGAGG)n 472 + 2862 3810 0 2 359,565, 0,383, +,+, 628022 Simple_repeat Simple_repeat 585 chrUn_NT_465708v1 6415 7683 (CGAGG)n 515 + 6415 7683 0 5 327,180,177,178,272, 0,355,561,776,996, +,+,+,+,+, 628031 Simple_repeat Simple_repeat 585 chrUn_NT_465708v1 9906 10285 (CGAGG)n 557 + 9906 10285 0 2 183,177, 0,202, +,+, 628042 Simple_repeat Simple_repeat 585 chrUn_NT_465708v1 11235 12070 (CGAGG)n 528 + 11235 12070 0 2 572,84, 0,751, +,+, 628046 Simple_repeat Simple_repeat 585 chrUn_NT_465708v1 13485 13873 (CGAGG)n 503 + 13485 13873 0 2 179,184, 0,204, +,+, 628051 Simple_repeat Simple_repeat 585 chrUn_NT_465708v1 13959 15548 (CGAGG)n 552 + 13959 15548 0 2 1132,403, 0,1186, +,+, 628053 Simple_repeat Simple_repeat 585 chrUn_NT_465709v1 306 17465 Sat-CR1_GG 815 + 306 17465 0 3 15819,433,741, 0,15878,16418, +,+,+, 628061 Satellite Satellite 585 chrUn_NT_465710v1 13608 15268 CR1-G 476 + 13608 15268 0 3 581,156,387, 0,822,1273, +,+,+, 628066 LINE CR1 585 chrUn_NT_465710v1 16261 17484 GGLTR10C1 784 - 16261 17484 0 2 355,686, 0,537, -,-, 628069 LTR ERVK 585 chrUn_NT_465711v1 8949 11525 GGXHOI 388 - 8949 11525 0 5 575,1020,210,387,311, 0,598,1639,1861,2265, -,-,-,-,-, 628072 Satellite W-chromosome 585 chrUn_NT_465711v1 11602 14709 GGXHOI 428 - 11602 14709 0 4 54,1051,1654,262, 0,96,1169,2845, -,-,-,-, 628073 Satellite W-chromosome 585 chrUn_NT_465711v1 14773 17465 GGXHOI 390 - 14773 17465 0 2 305,2371, 0,321, -,-, 628074 Satellite W-chromosome 585 chrUn_NT_465712v1 1717 2187 (CAAGG)n 539 + 1717 2187 0 3 54,192,207, 0,71,263, +,+,+, 628076 Simple_repeat Simple_repeat 585 chrUn_NT_465712v1 3140 3542 (CAAGG)n 464 + 3140 3542 0 2 181,213, 0,189, +,+, 628080 Simple_repeat Simple_repeat 585 chrUn_NT_465712v1 4397 4958 (CAAGG)n 536 + 4397 4958 0 2 196,349, 0,212, +,+, 628085 Simple_repeat Simple_repeat 585 chrUn_NT_465712v1 6252 6890 (CCTTC)n 272 + 6252 6890 0 2 36,116, 0,522, +,+, 628087 Simple_repeat Simple_repeat 585 chrUn_NT_465712v1 14552 15941 GGLTR7-int 345 - 14552 15941 0 3 278,210,101, 0,1052,1288, -,-,-, 628100 LTR ERV1 585 chrUn_NT_465715v1 5530 5598 (TTTAAT)n 418 + 5530 5598 0 2 15,10, 0,58, +,+, 628173 Simple_repeat Simple_repeat 585 chrUn_NT_465718v1 4967 6093 CR1-B2 688 - 4967 6093 0 2 898,225, 0,901, -,-, 628289 LINE CR1 585 chrUn_NT_465718v1 12212 13223 CR1-B2 699 - 12212 13223 0 2 783,225, 0,786, -,-, 628298 LINE CR1 585 chrUn_NT_465719v1 636 4956 GGXHOI 389 - 636 4956 0 7 414,536,412,510,890,311,1065, 0,456,1012,1472,2007,2916,3255, -,-,-,-,-,-,-, 628301 Satellite W-chromosome 585 chrUn_NT_465719v1 5043 5963 GGXHOI 396 - 5043 5963 0 2 790,117, 0,803, -,-, 628302 Satellite W-chromosome 585 chrUn_NT_465719v1 6036 8332 GGXHOI 421 - 6036 8332 0 4 977,144,664,421, 0,996,1159,1875, -,-,-,-, 628303 Satellite W-chromosome 585 chrUn_NT_465719v1 8405 12544 GGXHOI 399 - 8405 12544 0 3 2369,1305,438, 0,2384,3701, -,-,-, 628304 Satellite W-chromosome 585 chrUn_NT_465719v1 12622 17408 GGXHOI 389 - 12622 17408 0 7 766,751,618,450,1555,349,111, 0,788,1602,2264,2734,4314,4675, -,-,-,-,-,-,-, 628305 Satellite W-chromosome 585 chrUn_NT_465720v1 181 2137 GGXHOI 514 + 181 2137 0 3 211,233,466, 0,831,1490, +,+,+, 628307 Satellite W-chromosome 585 chrUn_NT_465720v1 2255 3328 GGXHOI 518 + 2255 3328 0 3 362,328,19, 0,414,1054, +,+,+, 628311 Satellite W-chromosome 585 chrUn_NT_465720v1 3404 4488 GGXHOI 473 + 3404 4488 0 3 564,190,250, 0,588,834, +,+,+, 628313 Satellite W-chromosome 585 chrUn_NT_465720v1 4556 8175 GGXHOI 550 + 4556 8175 0 6 211,333,919,475,318,20, 0,425,1070,2302,2968,3599, +,+,+,+,+,+, 628314 Satellite W-chromosome 585 chrUn_NT_465720v1 8254 10449 GGXHOI 584 + 8254 10449 0 2 920,980, 0,1215, +,+, 628320 Satellite W-chromosome 585 chrUn_NT_465720v1 10861 11750 GGXHOI 592 + 10861 11750 0 2 275,365, 0,524, +,+, 628323 Satellite W-chromosome 585 chrUn_NT_465720v1 12161 13375 GGXHOI 564 + 12161 13375 0 3 275,364,18, 0,524,1196, +,+,+, 628326 Satellite W-chromosome 585 chrUn_NT_465720v1 13451 14385 GGXHOI 534 + 13451 14385 0 2 205,424, 0,510, +,+, 628329 Satellite W-chromosome 585 chrUn_NT_465720v1 14689 15772 GGXHOI 559 + 14689 15772 0 3 581,179,25, 0,597,1058, +,+,+, 628333 Satellite W-chromosome 585 chrUn_NT_465723v1 842 17399 GGXHOI 392 + 842 17399 0 17 1828,930,1017,974,979,978,979,979,940,979,979,979,979,979,975,547,167, 0,1847,2794,3831,4825,5824,6822,7821,8820,9817,10816,11815,12814,13813,14812,15807,16390, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 628396 Satellite W-chromosome 585 chrUn_NT_465725v1 12637 12991 GGERVK10-int 289 + 12637 12991 0 2 125,86, 0,268, +,+, 628412 LTR ERVK 585 chrUn_NT_465725v1 15051 15347 GGLTR3E1 704 - 15051 15347 0 2 136,160, 0,136, -,-, 628416 LTR ERVL 585 chrUn_NT_465726v1 3595 5660 GGXHOI 417 - 3595 5660 0 4 647,895,146,338, 0,662,1570,1727, -,-,-,-, 628418 Satellite W-chromosome 585 chrUn_NT_465726v1 5744 6500 GGXHOI 372 - 5744 6500 0 2 333,410, 0,346, -,-, 628419 Satellite W-chromosome 585 chrUn_NT_465726v1 6582 7422 GGXHOI 419 - 6582 7422 0 2 561,260, 0,580, -,-, 628420 Satellite W-chromosome 585 chrUn_NT_465726v1 7548 8626 GGXHOI 415 - 7548 8626 0 3 571,146,338, 0,583,740, -,-,-, 628421 Satellite W-chromosome 585 chrUn_NT_465726v1 8710 11948 GGXHOI 379 - 8710 11948 0 4 1400,412,560,775, 0,1418,1882,2463, -,-,-,-, 628422 Satellite W-chromosome 585 chrUn_NT_465726v1 12548 14350 GGXHOI 390 - 12548 14350 0 3 524,837,411, 0,541,1391, -,-,-, 628424 Satellite W-chromosome 585 chrUn_NT_465726v1 14433 17360 GGXHOI 407 - 14433 17360 0 4 488,146,1922,333, 0,500,657,2594, -,-,-,-, 628425 Satellite W-chromosome 585 chrUn_NT_465727v1 139 778 (CCTTG)n 453 + 139 778 0 2 181,401, 0,238, +,+, 628427 Simple_repeat Simple_repeat 585 chrUn_NT_465727v1 977 1338 (GCCTG)n 562 + 977 1338 0 2 89,94, 0,267, +,+, 628430 Simple_repeat Simple_repeat 585 chrUn_NT_465727v1 6900 8033 GGLTR7-int 335 + 6900 8033 0 3 100,236,280, 0,126,853, +,+,+, 628437 LTR ERV1 585 chrUn_NT_465729v1 4616 7510 GGXHOI 375 - 4616 7510 0 3 1607,279,967, 0,1620,1927, -,-,-, 628456 Satellite W-chromosome 585 chrUn_NT_465729v1 9213 11505 GGLTR7-int 835 - 9213 11505 0 3 352,483,417, 0,1382,1875, -,-,-, 628460 LTR ERV1 585 chrUn_NT_465729v1 12253 12720 (CAAGG)n 560 + 12253 12720 0 2 160,307, 0,160, +,+, 628465 Simple_repeat Simple_repeat 585 chrUn_NT_465729v1 13596 14619 (GCCTG)n 538 + 13596 14619 0 5 218,222,56,246,192, 0,218,470,555,831, +,+,+,+,+, 628469 Simple_repeat Simple_repeat 585 chrUn_NT_465729v1 15133 15554 GGLTR7A 638 - 15133 15554 0 2 344,77, 0,344, -,-, 628474 LTR ERV1 585 chrUn_NT_465729v1 15670 16656 (CCCTAA)n 507 + 15670 16656 0 2 193,740, 0,246, +,+, 628475 Simple_repeat Simple_repeat 585 chrUn_NT_465729v1 17019 17424 (CCCTAA)n 557 + 17019 17424 0 2 175,177, 0,228, +,+, 628478 Simple_repeat Simple_repeat 585 chrUn_NT_465730v1 2614 10032 GGXHOI 558 - 2614 10032 0 8 208,330,29,155,368,204,402,632, 0,1019,1787,1844,4473,5209,5899,6786, -,-,-,-,-,-,-,-, 628483 Satellite W-chromosome 585 chrUn_NT_465730v1 10518 11043 GGXHOI 431 - 10518 11043 0 3 55,65,132, 0,298,393, -,-,-, 628492 Satellite W-chromosome 585 chrUn_NT_465730v1 11151 12821 GGXHOI 544 - 11151 12821 0 2 227,97, 0,1573, -,-, 628494 Satellite W-chromosome 585 chrUn_NT_465730v1 13252 15464 GGXHOI 560 - 13252 15464 0 3 405,210,956, 0,650,1256, -,-,-, 628497 Satellite W-chromosome 585 chrUn_NT_465731v1 1730 2401 (CCTTG)n 439 + 1730 2401 0 3 187,191,212, 0,236,459, +,+,+, 628509 Simple_repeat Simple_repeat 585 chrUn_NT_465731v1 2796 3161 (CCTTG)n 406 + 2796 3161 0 2 182,164, 0,201, +,+, 628511 Simple_repeat Simple_repeat 585 chrUn_NT_465731v1 3586 4470 (CAAGG)n 479 + 3586 4470 0 4 156,64,193,251, 0,302,416,633, +,+,+,+, 628516 Simple_repeat Simple_repeat 585 chrUn_NT_465731v1 4518 5080 (CCTTG)n 521 + 4518 5080 0 2 59,453, 0,109, +,+, 628519 Simple_repeat Simple_repeat 585 chrUn_NT_465731v1 5909 6958 GGXHOI 390 + 5909 6958 0 2 471,515, 0,534, +,+, 628523 Satellite W-chromosome 585 chrUn_NT_465731v1 7057 8108 GGXHOI 392 + 7057 8108 0 2 472,516, 0,535, +,+, 628524 Satellite W-chromosome 585 chrUn_NT_465731v1 8207 9258 GGXHOI 392 + 8207 9258 0 2 472,516, 0,535, +,+, 628525 Satellite W-chromosome 585 chrUn_NT_465731v1 9357 10903 GGXHOI 385 + 9357 10903 0 2 472,1011, 0,535, +,+, 628526 Satellite W-chromosome 585 chrUn_NT_465731v1 13383 14341 GGXHOI 339 + 13383 14341 0 2 597,350, 0,608, +,+, 628529 Satellite W-chromosome 585 chrUn_NT_465731v1 15683 16883 GGXHOI 336 + 15683 16883 0 2 387,752, 0,448, +,+, 628532 Satellite W-chromosome 585 chrUn_NT_465732v1 1566 4668 GGXHOI 359 - 1566 4668 0 2 1532,1555, 0,1547, -,-, 628536 Satellite W-chromosome 585 chrUn_NT_465732v1 5206 8535 GGXHOI 380 - 5206 8535 0 4 1326,558,805,555, 0,1373,1947,2774, -,-,-,-, 628538 Satellite W-chromosome 585 chrUn_NT_465732v1 14991 16252 (TTAGGG)n 682 + 14991 16252 0 2 302,939, 0,322, +,+, 628550 Simple_repeat Simple_repeat 585 chrUn_NT_465732v1 17063 17415 (TTAGGG)n 910 + 17063 17415 0 2 124,25, 0,327, +,+, 628552 Simple_repeat Simple_repeat 585 chrUn_NT_465733v1 5294 6556 GGXHOI 384 - 5294 6556 0 2 423,822, 0,440, -,-, 628564 Satellite W-chromosome 585 chrUn_NT_465733v1 7540 8292 GGXHOI 346 - 7540 8292 0 2 451,271, 0,481, -,-, 628568 Satellite W-chromosome 585 chrUn_NT_465733v1 8326 9452 GGXHOI 366 - 8326 9452 0 2 681,423, 0,703, -,-, 628570 Satellite W-chromosome 585 chrUn_NT_465733v1 9471 10292 GGXHOI 401 - 9471 10292 0 2 307,493, 0,328, -,-, 628572 Satellite W-chromosome 585 chrUn_NT_465733v1 10333 10953 GGXHOI 401 - 10333 10953 0 2 316,290, 0,330, -,-, 628574 Satellite W-chromosome 585 chrUn_NT_465733v1 11730 13043 GGXHOI 331 - 11730 13043 0 2 156,420, 0,893, -,-, 628578 Satellite W-chromosome 585 chrUn_NT_465733v1 13064 13885 GGXHOI 409 - 13064 13885 0 2 306,494, 0,327, -,-, 628582 Satellite W-chromosome 585 chrUn_NT_465733v1 14822 15593 GGXHOI 375 - 14822 15593 0 2 275,475, 0,296, -,-, 628587 Satellite W-chromosome 585 chrUn_NT_465733v1 16113 16705 GGXHOI 363 - 16113 16705 0 2 225,349, 0,243, -,-, 628590 Satellite W-chromosome 585 chrUn_NT_465733v1 16838 17411 GGXHOI 414 - 16838 17411 0 2 275,277, 0,296, -,-, 628592 Satellite W-chromosome 585 chrUn_NT_465734v1 1023 2703 GGXHOI 354 - 1023 2703 0 2 456,1201, 0,479, -,-, 628594 Satellite W-chromosome 585 chrUn_NT_465734v1 2778 6745 GGXHOI 373 - 2778 6745 0 4 557,2385,395,543, 0,600,3010,3424, -,-,-,-, 628595 Satellite W-chromosome 585 chrUn_NT_465734v1 7042 8077 GGXHOI 421 - 7042 8077 0 2 626,397, 0,638, -,-, 628596 Satellite W-chromosome 585 chrUn_NT_465734v1 8359 12465 GGXHOI 397 - 8359 12465 0 4 1727,615,1075,603, 0,1768,2407,3503, -,-,-,-, 628598 Satellite W-chromosome 585 chrUn_NT_465734v1 13170 17320 GGXHOI 379 - 13170 17320 0 2 414,3716, 0,434, -,-, 628600 Satellite W-chromosome 585 chrUn_NT_465735v1 9878 12345 GGLTR7-int 585 + 9878 12345 0 2 333,793, 0,1674, +,+, 628611 LTR ERV1 585 chrUn_NT_465735v1 12525 14730 GGLTR10D-int 920 - 12525 14730 0 2 363,1839, 0,366, -,-, 628614 LTR ERVK 585 chrUn_NT_465735v1 15759 16526 (CGAGG)n 488 + 15759 16526 0 2 548,185, 0,582, +,+, 628618 Simple_repeat Simple_repeat 585 chrUn_NT_465735v1 16698 17234 (CGAGG)n 487 + 16698 17234 0 2 183,337, 0,199, +,+, 628620 Simple_repeat Simple_repeat 585 chrUn_NT_465737v1 7136 9604 GGLTR7-int 583 + 7136 9604 0 2 340,793, 0,1675, +,+, 628650 LTR ERV1 585 chrUn_NT_465737v1 9616 12035 GGERV10_LTR 848 - 9616 12035 0 2 38,41, 0,2378, -,-, 628653 LTR ERVL 585 chrUn_NT_465737v1 9782 11993 GGLTR10D-int 916 - 9782 11993 0 2 360,1848, 0,363, -,-, 628654 LTR ERVK 585 chrUn_NT_465737v1 12032 12936 (CGAGG)n 563 + 12032 12936 0 4 209,177,248,183, 0,220,438,721, +,+,+,+, 628655 Simple_repeat Simple_repeat 585 chrUn_NT_465737v1 13030 14141 (CGAGG)n 517 + 13030 14141 0 2 621,465, 0,646, +,+, 628657 Simple_repeat Simple_repeat 585 chrUn_NT_465737v1 14210 14997 (CGAGG)n 483 + 14210 14997 0 2 242,526, 0,261, +,+, 628659 Simple_repeat Simple_repeat 585 chrUn_NT_465737v1 15655 15971 (CGAGG)n 536 + 15655 15971 0 2 125,174, 0,142, +,+, 628663 Simple_repeat Simple_repeat 585 chrUn_NT_465737v1 16078 16623 (CGAGG)n 493 + 16078 16623 0 2 173,350, 0,195, +,+, 628665 Simple_repeat Simple_repeat 585 chrUn_NT_465737v1 16956 17391 (CGAGG)n 513 + 16956 17391 0 2 245,163, 0,272, +,+, 628670 Simple_repeat Simple_repeat 585 chrUn_NT_465738v1 6160 9417 GGXHOI 365 - 6160 9417 0 4 262,1073,819,954, 0,324,1459,2303, -,-,-,-, 628679 Satellite W-chromosome 585 chrUn_NT_465738v1 10090 11143 GGXHOI 379 - 10090 11143 0 2 518,472, 0,581, -,-, 628681 Satellite W-chromosome 585 chrUn_NT_465738v1 11242 12867 GGXHOI 388 - 11242 12867 0 2 516,1046, 0,579, -,-, 628682 Satellite W-chromosome 585 chrUn_NT_465739v1 1118 8332 GGERVL18-int 494 - 1118 8332 0 5 238,226,3023,1003,227, 0,238,2421,5981,6987, -,-,-,-,-, 628691 LTR ERVL 585 chrUn_NT_465739v1 1583 3541 CR1-C 851 + 1583 3541 0 2 1115,843, 0,1115, +,+, 628692 LINE CR1 585 chrUn_NT_465739v1 10173 12832 GGERVL-C-int 504 + 10173 12832 0 4 535,438,80,1528, 0,535,1051,1131, +,+,+,+, 628697 LTR ERVL 585 chrUn_NT_465739v1 12944 13709 GGERV20_I-int 276 + 12944 13709 0 2 133,121, 0,644, +,+, 628699 LTR ERVL 585 chrUn_NT_465739v1 13709 14814 GGLTR3C2 646 - 13709 14814 0 2 414,127, 0,978, -,-, 628701 LTR ERVL 585 chrUn_NT_465739v1 15049 15370 GGERV10_LTR 517 - 15049 15370 0 2 158,68, 0,253, -,-, 628703 LTR ERVL 585 chrUn_NT_465739v1 16585 16853 GGLTR7B 482 - 16585 16853 0 2 55,103, 0,165, -,-, 628704 LTR ERV1 585 chrUn_NT_465740v1 2310 3581 CR1-H 602 - 2310 3581 0 2 117,1154, 0,117, -,-, 628708 LINE CR1 585 chrUn_NT_465741v1 741 1840 GGLTR3A 857 - 741 1840 0 2 579,520, 0,579, -,-, 628724 LTR ERVL 585 chrUn_NT_465741v1 1840 2639 GGERVL-C-int 758 + 1840 2639 0 2 291,508, 0,291, +,+, 628725 LTR ERVL 585 chrUn_NT_465741v1 6307 16553 GGLTR7A 733 - 6307 16553 0 3 109,3204,601, 0,6441,9645, -,-,-, 628730 LTR ERV1 585 chrUn_NT_465741v1 6821 8114 GGERVL-B-int 750 + 6821 8114 0 2 468,823, 0,470, +,+, 628731 LTR ERVL 585 chrUn_NT_465741v1 8114 12748 ENS1-int 837 + 8114 12748 0 4 907,2280,364,808, 0,908,3462,3826, +,+,+,+, 628732 LTR ERVL 585 chrUn_NT_465742v1 550 13886 GGXHOI 593 - 550 13886 0 19 403,299,148,299,148,299,148,458,458,458,458,299,148,299,148,240,146,295,654, 0,1076,1386,2206,2516,3338,3648,4469,5601,6733,7865,8996,9306,10128,10438,11280,11569,12376,12682, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 628737 Satellite W-chromosome 585 chrUn_NT_465742v1 15212 16868 GGXHOI 580 - 15212 16868 0 2 401,586, 0,1070, -,-, 628752 Satellite W-chromosome 585 chrUn_NT_465743v1 218 828 (CAAGG)n 450 + 218 828 0 2 224,360, 0,250, +,+, 628757 Simple_repeat Simple_repeat 585 chrUn_NT_465743v1 880 1122 (CAAGG)n 393 + 880 1122 0 2 24,193, 0,49, +,+, 628759 Simple_repeat Simple_repeat 585 chrUn_NT_465743v1 1230 2101 (CCTTG)n 506 + 1230 2101 0 3 222,178,437, 0,246,434, +,+,+, 628761 Simple_repeat Simple_repeat 585 chrUn_NT_465743v1 3294 3727 (CAAGG)n 507 + 3294 3727 0 2 180,242, 0,191, +,+, 628765 Simple_repeat Simple_repeat 585 chrUn_NT_465743v1 3788 4192 (CCTTG)n 460 + 3788 4192 0 2 191,178, 0,226, +,+, 628766 Simple_repeat Simple_repeat 585 chrUn_NT_465743v1 6308 7223 GGXHOI 371 - 6308 7223 0 2 514,384, 0,531, -,-, 628773 Satellite W-chromosome 585 chrUn_NT_465743v1 7321 9205 GGXHOI 367 - 7321 9205 0 2 517,1350, 0,534, -,-, 628774 Satellite W-chromosome 585 chrUn_NT_465743v1 10945 12171 GGXHOI 354 - 10945 12171 0 2 850,358, 0,868, -,-, 628777 Satellite W-chromosome 585 chrUn_NT_465743v1 12269 13893 GGXHOI 386 - 12269 13893 0 2 515,1046, 0,578, -,-, 628778 Satellite W-chromosome 585 chrUn_NT_465743v1 14031 15489 GGXHOI 368 - 14031 15489 0 2 1047,394, 0,1064, -,-, 628779 Satellite W-chromosome 585 chrUn_NT_465743v1 15588 16381 GGXHOI 335 - 15588 16381 0 2 477,258, 0,535, -,-, 628780 Satellite W-chromosome 585 chrUn_NT_465743v1 16564 17360 GGXHOI 380 - 16564 17360 0 2 512,223, 0,573, -,-, 628781 Satellite W-chromosome 585 chrUn_NT_465744v1 10805 11214 A-rich 584 + 10805 11214 0 2 336,38, 0,371, +,+, 628810 Low_complexity Low_complexity 585 chrUn_NT_465745v1 421 17346 Sat-CR1_GG 903 + 421 17346 0 3 2049,14516,301, 0,2066,16624, +,+,+, 628830 Satellite Satellite 585 chrUn_NT_465747v1 2062 3606 GGXHOI 379 - 2062 3606 0 2 1009,472, 0,1072, -,-, 628842 Satellite W-chromosome 585 chrUn_NT_465747v1 3705 4756 GGXHOI 378 - 3705 4756 0 2 516,472, 0,579, -,-, 628843 Satellite W-chromosome 585 chrUn_NT_465747v1 4855 5906 GGXHOI 378 - 4855 5906 0 2 516,472, 0,579, -,-, 628844 Satellite W-chromosome 585 chrUn_NT_465747v1 6005 7056 GGXHOI 378 - 6005 7056 0 2 516,472, 0,579, -,-, 628845 Satellite W-chromosome 585 chrUn_NT_465747v1 7155 8206 GGXHOI 378 - 7155 8206 0 2 516,472, 0,579, -,-, 628846 Satellite W-chromosome 585 chrUn_NT_465747v1 8305 9356 GGXHOI 378 - 8305 9356 0 2 516,472, 0,579, -,-, 628847 Satellite W-chromosome 585 chrUn_NT_465747v1 9455 10506 GGXHOI 378 - 9455 10506 0 2 516,472, 0,579, -,-, 628848 Satellite W-chromosome 585 chrUn_NT_465747v1 10605 11656 GGXHOI 378 - 10605 11656 0 2 516,472, 0,579, -,-, 628849 Satellite W-chromosome 585 chrUn_NT_465747v1 11755 12806 GGXHOI 378 - 11755 12806 0 2 516,472, 0,579, -,-, 628850 Satellite W-chromosome 585 chrUn_NT_465747v1 12905 13956 GGXHOI 378 - 12905 13956 0 2 516,472, 0,579, -,-, 628851 Satellite W-chromosome 585 chrUn_NT_465747v1 14055 15106 GGXHOI 378 - 14055 15106 0 2 516,472, 0,579, -,-, 628852 Satellite W-chromosome 585 chrUn_NT_465747v1 15205 16256 GGXHOI 378 - 15205 16256 0 2 516,472, 0,579, -,-, 628853 Satellite W-chromosome 585 chrUn_NT_465748v1 1969 4179 GGXHOI 384 - 1969 4179 0 4 380,1179,473,132, 0,395,1590,2078, -,-,-,-, 628857 Satellite W-chromosome 585 chrUn_NT_465748v1 4455 5995 GGXHOI 399 - 4455 5995 0 3 1067,188,250, 0,1083,1290, -,-,-, 628858 Satellite W-chromosome 585 chrUn_NT_465748v1 7238 10525 GGXHOI 327 - 7238 10525 0 4 945,1026,1097,116, 0,985,2024,3171, -,-,-,-, 628862 Satellite W-chromosome 585 chrUn_NT_465748v1 10599 11846 GGXHOI 370 - 10599 11846 0 2 848,383, 0,864, -,-, 628863 Satellite W-chromosome 585 chrUn_NT_465748v1 14306 17286 GGXHOI 383 - 14306 17286 0 2 2575,388, 0,2592, -,-, 628866 Satellite W-chromosome 585 chrUn_NT_465749v1 2177 3888 GGXHOI 546 - 2177 3888 0 2 71,1400, 0,311, -,-, 628871 Satellite W-chromosome 585 chrUn_NT_465749v1 3920 8809 GGXHOI 572 - 3920 8809 0 4 242,331,64,123, 0,984,4207,4766, -,-,-,-, 628874 Satellite W-chromosome 585 chrUn_NT_465749v1 11130 17010 GGXHOI 568 - 11130 17010 0 3 277,225,3612, 0,836,2268, -,-,-, 628879 Satellite W-chromosome 585 chrUn_NT_465750v1 8419 9545 CR1-B2 693 + 8419 9545 0 2 225,898, 0,228, +,+, 628889 LINE CR1 585 chrUn_NT_465751v1 8833 10229 GGLTR7-int 345 - 8833 10229 0 3 280,209,101, 0,1060,1295, -,-,-, 628916 LTR ERV1 585 chrUn_NT_465751v1 10965 13806 GGERVL-B-int 708 - 10965 13806 0 2 916,1925, 0,916, -,-, 628918 LTR ERVL 585 chrUn_NT_465751v1 16510 16917 (CAGGC)n 520 + 16510 16917 0 2 193,214, 0,193, +,+, 628924 Simple_repeat Simple_repeat 585 chrUn_NT_465752v1 12195 14573 GGLTR7-int 606 + 12195 14573 0 2 248,793, 0,1585, +,+, 628932 LTR ERV1 585 chrUn_NT_465752v1 14585 16999 GGERV10_LTR 820 - 14585 16999 0 2 37,41, 0,2373, -,-, 628935 LTR ERVL 585 chrUn_NT_465752v1 14751 16957 GGLTR10D-int 925 - 14751 16957 0 2 363,1840, 0,366, -,-, 628936 LTR ERVK 585 chrUn_NT_465754v1 10713 12690 GGXHOI 378 - 10713 12690 0 2 1489,472, 0,1505, -,-, 628944 Satellite W-chromosome 585 chrUn_NT_465754v1 12895 15039 GGXHOI 373 - 12895 15039 0 2 1409,717, 0,1427, -,-, 628945 Satellite W-chromosome 585 chrUn_NT_465754v1 15409 17302 GGXHOI 419 - 15409 17302 0 2 1248,630, 0,1263, -,-, 628947 Satellite W-chromosome 585 chrUn_NT_465755v1 14911 17080 Sat-CR1_GG 259 - 14911 17080 0 2 200,184, 0,1985, -,-, 628977 Satellite Satellite 585 chrUn_NT_465756v1 1357 5126 GGXHOI 576 - 1357 5126 0 6 247,146,362,297,455,490, 0,258,959,1653,2157,3279, -,-,-,-,-,-, 628984 Satellite W-chromosome 585 chrUn_NT_465756v1 5167 6197 GGXHOI 600 - 5167 6197 0 2 871,148, 0,882, -,-, 628990 Satellite W-chromosome 585 chrUn_NT_465756v1 6919 10443 GGXHOI 549 - 6919 10443 0 6 398,290,200,339,127,400, 0,1065,1366,2065,2959,3124, -,-,-,-,-,-, 628992 Satellite W-chromosome 585 chrUn_NT_465756v1 11161 17304 GGXHOI 584 - 11161 17304 0 8 197,569,299,142,260,154,456,576, 0,957,2194,2504,3314,3616,4439,5567, -,-,-,-,-,-,-,-, 628997 Satellite W-chromosome 585 chrUn_NT_465757v1 2282 2738 CR1-H 683 - 2282 2738 0 2 162,294, 0,162, -,-, 629006 LINE CR1 585 chrUn_NT_465757v1 13035 13659 CR1-H 683 - 13035 13659 0 2 139,479, 0,145, -,-, 629017 LINE CR1 585 chrUn_NT_465757v1 16270 16725 CR1-H 657 - 16270 16725 0 2 163,292, 0,163, -,-, 629021 LINE CR1 585 chrUn_NT_465758v1 1072 2982 GGXHOI 572 - 1072 2982 0 3 239,148,823, 0,250,1087, -,-,-, 629024 Satellite W-chromosome 585 chrUn_NT_465758v1 3068 8933 GGXHOI 547 - 3068 8933 0 7 1127,446,1005,125,404,408,819, 0,1336,2065,3505,3672,4627,5046, -,-,-,-,-,-,-, 629027 Satellite W-chromosome 585 chrUn_NT_465758v1 8974 12148 GGXHOI 591 - 8974 12148 0 5 456,576,263,148,77, 0,953,2190,2502,3097, -,-,-,-,-, 629033 Satellite W-chromosome 585 chrUn_NT_465758v1 13678 17280 GGXHOI 580 - 13678 17280 0 5 249,148,456,456,239, 0,260,1080,2212,3363, -,-,-,-,-, 629041 Satellite W-chromosome 585 chrUn_NT_465760v1 15422 16467 GGXHOI 371 - 15422 16467 0 2 514,469, 0,576, -,-, 629063 Satellite W-chromosome 585 chrUn_NT_465761v1 9545 17072 GGXHOI 528 - 9545 17072 0 13 285,247,223,297,194,247,194,306,177,375,188,544,339, 0,728,1270,1889,2509,3150,3720,4311,4894,5421,6117,6623,7188, -,-,-,-,-,-,-,-,-,-,-,-,-, 629081 Satellite W-chromosome 585 chrUn_NT_465762v1 689 1740 GGXHOI 378 - 689 1740 0 2 516,472, 0,579, -,-, 629095 Satellite W-chromosome 585 chrUn_NT_465762v1 1839 2890 GGXHOI 378 - 1839 2890 0 2 516,472, 0,579, -,-, 629096 Satellite W-chromosome 585 chrUn_NT_465762v1 7397 10012 GGXHOI 369 - 7397 10012 0 3 516,940,1034, 0,579,1581, -,-,-, 629103 Satellite W-chromosome 585 chrUn_NT_465762v1 10663 11928 GGXHOI 348 - 10663 11928 0 3 252,247,680, 0,302,585, -,-,-, 629105 Satellite W-chromosome 585 chrUn_NT_465762v1 12045 14164 GGXHOI 389 - 12045 14164 0 2 1010,1046, 0,1073, -,-, 629106 Satellite W-chromosome 585 chrUn_NT_465764v1 367 3128 Sat-CR1_GG 176 - 367 3128 0 2 755,1843, 0,918, -,-, 629121 Satellite Satellite 585 chrUn_NT_465764v1 1328 4423 GGXHOI 540 - 1328 4423 0 2 2065,543, 0,2552, -,-, 629123 Satellite W-chromosome 585 chrUn_NT_465764v1 4558 7544 GGXHOI 544 - 4558 7544 0 4 85,426,337,649, 0,518,1461,2337, -,-,-,-, 629126 Satellite W-chromosome 585 chrUn_NT_465764v1 6917 9371 Sat-CR1_GG 156 - 6917 9371 0 3 670,43,80, 0,1684,2374, -,-,-, 629130 Satellite Satellite 585 chrUn_NT_465764v1 9322 14967 GGXHOI 550 - 9322 14967 0 5 320,186,22,266,1747, 0,887,1725,2428,3898, -,-,-,-,-, 629133 Satellite W-chromosome 585 chrUn_NT_465764v1 15005 17282 GGXHOI 524 - 15005 17282 0 4 482,58,143,413, 0,917,1673,1864, -,-,-,-, 629139 Satellite W-chromosome 585 chrUn_NT_465765v1 7867 8645 GGXHOI 342 + 7867 8645 0 2 302,455, 0,323, +,+, 629146 Satellite W-chromosome 585 chrUn_NT_465765v1 9927 15446 GGXHOI 357 + 9927 15446 0 3 3322,1407,708, 0,3364,4811, +,+,+, 629148 Satellite W-chromosome 585 chrUn_NT_465769v1 11445 12906 GGXHOI 537 - 11445 12906 0 3 462,524,210, 0,504,1251, -,-,-, 629183 Satellite W-chromosome 585 chrUn_NT_465769v1 13950 14271 GGXHOI 357 - 13950 14271 0 2 142,151, 0,170, -,-, 629186 Satellite W-chromosome 585 chrUn_NT_465769v1 15872 17263 GGXHOI 510 - 15872 17263 0 2 469,877, 0,514, -,-, 629188 Satellite W-chromosome 585 chrUn_NT_465770v1 10573 12330 GGERVL-A-int 752 + 10573 12330 0 2 457,1300, 0,457, +,+, 629194 LTR ERVL 585 chrUn_NT_465771v1 968 16435 GGXHOI 433 + 968 16435 0 20 1049,1345,1018,1436,1027,1523,1480,64,436,946,64,899,64,434,614,293,64,992,517,652, 0,1109,2475,3513,4964,6006,7544,9081,9165,9614,10617,10701,11657,11741,12188,12843,13193,13277,14284,14815, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 629200 Satellite W-chromosome 585 chrUn_NT_465773v1 940 6847 CR1-F 538 + 940 6847 0 18 200,190,200,203,204,203,155,201,190,200,203,203,204,155,192,188,191,201, 0,245,477,977,1222,1468,1937,2382,2628,2860,3360,3605,3850,4321,4766,5005,5224,5706, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 629217 LINE CR1 585 chrUn_NT_465773v1 6889 8000 CR1-F 498 + 6889 8000 0 4 200,204,155,199, 0,242,712,912, +,+,+,+, 629225 LINE CR1 585 chrUn_NT_465773v1 8034 8330 CR1-F 474 + 8034 8330 0 2 45,197, 0,99, +,+, 629227 LINE CR1 585 chrUn_NT_465773v1 8371 11377 CR1-F 536 + 8371 11377 0 9 201,191,200,199,202,200,154,184,173, 0,246,479,978,1219,1463,1930,2372,2833, +,+,+,+,+,+,+,+,+, 629228 LINE CR1 585 chrUn_NT_465773v1 11421 17257 CR1-F 554 + 11421 17257 0 18 177,190,199,203,202,204,155,164,169,164,189,200,203,202,204,154,190,95, 0,222,454,951,1196,1440,1910,2354,2733,2946,3155,3386,3887,4132,4376,4846,5286,5741, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 629233 LINE CR1 585 chrUn_NT_465774v1 371 2774 GGERV10_LTR 921 + 371 2774 0 2 29,38, 0,2365, +,+, 629243 LTR ERVL 585 chrUn_NT_465774v1 401 2608 GGLTR10D-int 885 + 401 2608 0 2 1839,365, 0,1842, +,+, 629244 LTR ERVK 585 chrUn_NT_465774v1 2786 5214 GGLTR7-int 597 - 2786 5214 0 2 784,338, 0,2090, -,-, 629245 LTR ERV1 585 chrUn_NT_465774v1 9373 10019 G-rich 526 + 9373 10019 0 2 35,555, 0,91, +,+, 629251 Low_complexity Low_complexity 585 chrUn_NT_465776v1 3222 5302 GGXHOI 346 + 3222 5302 0 2 1066,998, 0,1082, +,+, 629261 Satellite W-chromosome 585 chrUn_NT_465776v1 9868 10747 GGXHOI 334 + 9868 10747 0 2 445,372, 0,507, +,+, 629266 Satellite W-chromosome 585 chrUn_NT_465776v1 11192 12445 GGXHOI 338 + 11192 12445 0 2 548,642, 0,611, +,+, 629267 Satellite W-chromosome 585 chrUn_NT_465776v1 15340 16319 GGXHOI 319 + 15340 16319 0 2 189,773, 0,206, +,+, 629271 Satellite W-chromosome 585 chrUn_NT_465777v1 9593 16283 GGXHOI 400 - 9593 16283 0 5 977,1360,265,3772,261, 0,991,2364,2642,6429, -,-,-,-,-, 629282 Satellite W-chromosome 585 chrUn_NT_465778v1 86 4527 CR1-Y1_Aves 438 - 86 4527 0 2 273,114, 0,4327, -,-, 629284 LINE CR1 585 chrUn_NT_465778v1 607 1311 Charlie12_GG 488 - 607 1311 0 2 518,186, 0,518, -,-, 629286 DNA hAT-Charlie 585 chrUn_NT_465778v1 1311 1559 CR1-Y4 513 + 1311 1559 0 2 187,61, 0,187, +,+, 629287 LINE CR1 585 chrUn_NT_465778v1 1558 4401 CR1-Y 542 - 1558 4401 0 2 227,1519, 0,1324, -,-, 629288 LINE CR1 585 chrUn_NT_465779v1 1725 3995 GGXHOI 558 - 1725 3995 0 4 197,60,828,18, 0,478,878,2252, -,-,-,-, 629302 Satellite W-chromosome 585 chrUn_NT_465779v1 5059 8489 GGXHOI 554 - 5059 8489 0 5 33,229,834,778,206, 0,308,879,2108,3224, -,-,-,-,-, 629307 Satellite W-chromosome 585 chrUn_NT_465779v1 9097 11368 GGXHOI 568 - 9097 11368 0 5 21,492,60,326,136, 0,360,1133,1531,2135, -,-,-,-,-, 629313 Satellite W-chromosome 585 chrUn_NT_465779v1 11434 12019 GGXHOI 560 - 11434 12019 0 2 21,245, 0,340, -,-, 629318 Satellite W-chromosome 585 chrUn_NT_465779v1 12089 13175 GGXHOI 556 - 12089 13175 0 3 33,225,151, 0,314,935, -,-,-, 629320 Satellite W-chromosome 585 chrUn_NT_465779v1 13265 14362 GGXHOI 576 - 13265 14362 0 3 12,228,236, 0,313,861, -,-,-, 629323 Satellite W-chromosome 585 chrUn_NT_465779v1 14431 15515 GGXHOI 542 - 14431 15515 0 3 11,225,202, 0,316,882, -,-,-, 629326 Satellite W-chromosome 585 chrUn_NT_465779v1 15600 16737 GGXHOI 509 - 15600 16737 0 4 227,249,20,250, 0,273,540,887, -,-,-,-, 629329 Satellite W-chromosome 585 chrUn_NT_465781v1 7202 8842 GGXHOI 391 + 7202 8842 0 2 984,614, 0,1026, +,+, 629347 Satellite W-chromosome 585 chrUn_NT_465781v1 9062 10637 GGXHOI 392 + 9062 10637 0 2 1002,555, 0,1020, +,+, 629348 Satellite W-chromosome 585 chrUn_NT_465781v1 12661 17228 GGERV20_I-int 860 + 12661 17228 0 3 199,1615,2665, 0,199,1902, +,+,+, 629350 LTR ERVL 585 chrUn_NT_465782v1 3950 5482 GGXHOI 536 - 3950 5482 0 2 511,986, 0,546, -,-, 629352 Satellite W-chromosome 585 chrUn_NT_465782v1 7775 10373 GGXHOI 550 - 7775 10373 0 2 1361,1223, 0,1375, -,-, 629357 Satellite W-chromosome 585 chrUn_NT_465782v1 10439 12489 GGXHOI 579 - 10439 12489 0 3 275,155,1544, 0,288,506, -,-,-, 629358 Satellite W-chromosome 585 chrUn_NT_465782v1 13654 15228 GGXHOI 502 - 13654 15228 0 3 241,285,1012, 0,254,562, -,-,-, 629361 Satellite W-chromosome 585 chrUn_NT_465786v1 8679 13332 CR1-D2 452 - 8679 13332 0 2 577,745, 0,3908, -,-, 629442 LINE CR1 585 chrUn_NT_465786v1 9954 12601 CR1-D 635 - 9954 12601 0 2 1644,1003, 0,1644, -,-, 629443 LINE CR1 585 chrUn_NT_465786v1 13322 13554 Charlie12_GG 465 - 13322 13554 0 2 102,130, 0,102, -,-, 629444 DNA hAT-Charlie 585 chrUn_NT_465788v1 1720 2760 GGXHOI 389 + 1720 2760 0 2 511,472, 0,568, +,+, 629450 Satellite W-chromosome 585 chrUn_NT_465788v1 4987 5722 GGXHOI 378 + 4987 5722 0 2 75,600, 0,135, +,+, 629453 Satellite W-chromosome 585 chrUn_NT_465788v1 8776 9827 GGXHOI 392 + 8776 9827 0 2 472,516, 0,535, +,+, 629457 Satellite W-chromosome 585 chrUn_NT_465788v1 9926 10977 GGXHOI 392 + 9926 10977 0 2 472,516, 0,535, +,+, 629458 Satellite W-chromosome 585 chrUn_NT_465788v1 11076 12622 GGXHOI 386 + 11076 12622 0 2 472,1011, 0,535, +,+, 629459 Satellite W-chromosome 585 chrUn_NT_465788v1 15102 17105 GGXHOI 351 + 15102 17105 0 2 965,1021, 0,982, +,+, 629462 Satellite W-chromosome 585 chrUn_NT_465790v1 8844 13513 ENS1-LTR 957 - 8844 13513 0 3 920,2826,919, 0,920,3750, -,-,-, 629483 LTR ERVL 585 chrUn_NT_465790v1 14031 14472 CR1-F2 290 + 14031 14472 0 2 88,338, 0,103, +,+, 629484 LINE CR1 585 chrUn_NT_465790v1 14530 17183 Z-REP 750 + 14530 17183 0 2 155,1790, 0,863, +,+, 629485 Satellite macro 585 chrUn_NT_465791v1 16002 16408 (CCTTG)n 545 + 16002 16408 0 2 172,234, 0,172, +,+, 629493 Simple_repeat Simple_repeat 585 chrUn_NT_465792v1 7571 8276 Sat-CR1_GG 174 + 7571 8276 0 2 50,487, 0,218, +,+, 629501 Satellite Satellite 585 chrUn_NT_465792v1 9694 10045 GGXHOI 357 + 9694 10045 0 2 162,133, 0,218, +,+, 629505 Satellite W-chromosome 585 chrUn_NT_465793v1 2030 3160 GGXHOI 334 + 2030 3160 0 2 899,184, 0,946, +,+, 629512 Satellite W-chromosome 585 chrUn_NT_465793v1 3353 17161 GGXHOI 361 + 3353 17161 0 11 345,915,355,1800,844,1046,1496,566,1803,3876,463, 0,381,1317,1729,3566,4452,5519,7030,7638,9455,13345, +,+,+,+,+,+,+,+,+,+,+, 629513 Satellite W-chromosome 585 chrUn_NT_465794v1 1085 2620 GGXHOI 595 - 1085 2620 0 3 405,299,147, 0,1078,1388, -,-,-, 629516 Satellite W-chromosome 585 chrUn_NT_465794v1 6741 8122 GGXHOI 594 - 6741 8122 0 2 407,299, 0,1082, -,-, 629525 Satellite W-chromosome 585 chrUn_NT_465794v1 8133 10546 GGXHOI 595 - 8133 10546 0 3 1121,148,575, 0,1132,1838, -,-,-, 629528 Satellite W-chromosome 585 chrUn_NT_465794v1 12403 17157 GGXHOI 546 - 12403 17157 0 5 407,992,204,655,735, 0,1081,2084,2690,4019, -,-,-,-,-, 629533 Satellite W-chromosome 585 chrUn_NT_465795v1 9943 10399 CR1-H 672 + 9943 10399 0 2 296,160, 0,296, +,+, 629547 LINE CR1 585 chrUn_NT_465795v1 12536 13164 CR1-H 675 + 12536 13164 0 2 469,140, 0,488, +,+, 629550 LINE CR1 585 chrUn_NT_465797v1 2469 4919 GGXHOI 384 - 2469 4919 0 3 221,1433,763, 0,242,1687, -,-,-, 629555 Satellite W-chromosome 585 chrUn_NT_465797v1 4983 17035 GGXHOI 354 - 4983 17035 0 17 1469,302,473,1485,147,1416,581,156,618,1166,121,1217,132,206,289,1625,262, 0,1486,1827,2320,3857,4016,5445,6041,6252,6892,8073,8207,9438,9587,9810,10116,11790, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 629556 Satellite W-chromosome 585 chrUn_NT_465799v1 11300 14370 GGXHOI 338 + 11300 14370 0 5 936,242,163,405,1225, 0,951,1215,1420,1845, +,+,+,+,+, 629576 Satellite W-chromosome 585 chrUn_NT_465799v1 14528 17140 GGXHOI 420 + 14528 17140 0 5 1362,76,256,157,651, 0,1382,1518,1786,1961, +,+,+,+,+, 629577 Satellite W-chromosome 585 chrUn_NT_465801v1 3804 3933 GA-rich 352 + 3804 3933 0 2 42,37, 0,92, +,+, 629593 Low_complexity Low_complexity 585 chrUn_NT_465801v1 10148 10635 A-rich 593 + 10148 10635 0 2 414,38, 0,449, +,+, 629615 Low_complexity Low_complexity 585 chrUn_NT_465802v1 8333 9030 CR1-B2 717 - 8333 9030 0 2 469,225, 0,472, -,-, 629646 LINE CR1 585 chrUn_NT_465802v1 14943 15193 CR1-X 476 + 14943 15193 0 2 169,81, 0,169, +,+, 629649 LINE CR1 585 chrUn_NT_465803v1 1939 2566 CR1-H 684 - 1939 2566 0 2 139,469, 0,158, -,-, 629652 LINE CR1 585 chrUn_NT_465803v1 4710 5166 CR1-H 672 - 4710 5166 0 2 162,294, 0,162, -,-, 629656 LINE CR1 585 chrUn_NT_465803v1 16760 17136 CR1-H 558 - 16760 17136 0 2 123,249, 0,127, -,-, 629667 LINE CR1 585 chrUn_NT_465804v1 4013 6425 GGLTR7-int 519 + 4013 6425 0 2 305,780, 0,1632, +,+, 629671 LTR ERV1 585 chrUn_NT_465804v1 6602 8764 GGLTR10D-int 806 - 6602 8764 0 2 360,1797, 0,365, -,-, 629674 LTR ERVK 585 chrUn_NT_465804v1 9667 10091 (CGAGG)n 587 + 9667 10091 0 2 188,236, 0,188, +,+, 629682 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 10437 11067 (CGAGG)n 586 + 10437 11067 0 3 190,162,75, 0,209,555, +,+,+, 629686 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 11125 11739 (CGAGG)n 547 + 11125 11739 0 3 186,177,189, 0,199,425, +,+,+, 629689 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 11798 13083 (CGAGG)n 532 + 11798 13083 0 4 351,231,187,300, 0,536,786,985, +,+,+,+, 629691 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 13081 13705 (CCTCG)n 509 + 13081 13705 0 2 98,514, 0,110, +,+, 629693 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 14011 15016 (CCTCG)n 539 + 14011 15016 0 3 481,281,177, 0,532,828, +,+,+, 629695 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 15990 16578 (CCTCG)n 464 + 15990 16578 0 2 487,87, 0,501, +,+, 629701 Simple_repeat Simple_repeat 585 chrUn_NT_465804v1 16702 17133 (CCTCG)n 470 + 16702 17133 0 2 341,79, 0,352, +,+, 629703 Simple_repeat Simple_repeat 585 chrUn_NT_465805v1 11518 17087 (AACCCT)n 527 + 11518 17087 0 2 65,5489, 0,80, +,+, 629706 Simple_repeat Simple_repeat 585 chrUn_NT_465806v1 56 650 (CTCTATGGGG)n 522 + 56 650 0 4 129,130,135,116, 0,162,308,478, +,+,+,+, 629708 Satellite Satellite 585 chrUn_NT_465806v1 3320 17045 GGXHOI 433 + 3320 17045 0 21 890,660,853,161,354,772,161,354,772,161,352,772,161,975,603,1604,1974,477,358,511,304, 0,934,1611,2505,2688,3060,3873,4056,4428,5241,5424,5794,6607,6790,7783,8403,10024,12020,12512,12889,13421, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 629711 Satellite W-chromosome 585 chrUn_NT_465807v1 1220 1978 CR1-C2 694 + 1220 1978 0 2 406,57, 0,701, +,+, 629713 LINE CR1 585 chrUn_NT_465810v1 15589 16224 GGERVK10-int 323 + 15589 16224 0 3 105,140,86, 0,270,549, +,+,+, 629804 LTR ERVK 585 chrUn_NT_465812v1 2154 2419 (CTCTATGGGG)n 398 + 2154 2419 0 2 116,71, 0,194, +,+, 629809 Satellite Satellite 585 chrUn_NT_465812v1 8516 8857 (CATTG)n 576 + 8516 8857 0 2 163,11, 0,330, +,+, 629815 Simple_repeat Simple_repeat 585 chrUn_NT_465813v1 1454 2987 GGXHOI 396 - 1454 2987 0 2 1123,389, 0,1144, -,-, 629833 Satellite W-chromosome 585 chrUn_NT_465813v1 3088 4171 GGXHOI 349 - 3088 4171 0 2 266,759, 0,324, -,-, 629834 Satellite W-chromosome 585 chrUn_NT_465813v1 6160 8106 GGXHOI 371 - 6160 8106 0 2 1207,681, 0,1265, -,-, 629837 Satellite W-chromosome 585 chrUn_NT_465813v1 8246 10684 GGXHOI 367 - 8246 10684 0 3 1007,796,556, 0,1028,1882, -,-,-, 629838 Satellite W-chromosome 585 chrUn_NT_465813v1 10824 11748 GGXHOI 336 - 10824 11748 0 2 636,271, 0,653, -,-, 629839 Satellite W-chromosome 585 chrUn_NT_465813v1 11930 13388 GGXHOI 365 - 11930 13388 0 2 720,680, 0,778, -,-, 629840 Satellite W-chromosome 585 chrUn_NT_465813v1 14498 15778 GGXHOI 320 - 14498 15778 0 2 728,493, 0,787, -,-, 629843 Satellite W-chromosome 585 chrUn_NT_465814v1 1934 2123 (AACAACGGA)n 940 + 1934 2123 0 2 42,96, 0,93, +,+, 629850 Simple_repeat Simple_repeat 585 chrUn_NT_465814v1 2258 2412 (AACAACGGA)n 978 + 2258 2412 0 2 51,47, 0,107, +,+, 629851 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 63 583 (CGAGG)n 468 + 63 583 0 2 138,195, 0,325, +,+, 629903 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 992 1385 (CGAGG)n 588 + 992 1385 0 2 183,185, 0,208, +,+, 629908 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 3707 4180 (CGAGG)n 585 + 3707 4180 0 2 266,172, 0,301, +,+, 629922 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 6373 6768 (CGAGG)n 481 + 6373 6768 0 2 178,188, 0,207, +,+, 629932 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 6949 7868 (CGAGG)n 495 + 6949 7868 0 3 182,175,477, 0,219,442, +,+,+, 629935 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 9362 10102 (CGAGG)n 527 + 9362 10102 0 2 511,229, 0,511, +,+, 629940 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 10239 10716 (CGAGG)n 528 + 10239 10716 0 2 284,15, 0,462, +,+, 629941 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 11262 11817 (CGAGG)n 546 + 11262 11817 0 2 179,347, 0,208, +,+, 629946 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 12106 13018 (CGAGG)n 518 + 12106 13018 0 3 473,20,68, 0,650,844, +,+,+, 629949 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 13978 15387 (CGAGG)n 541 + 13978 15387 0 3 178,346,821, 0,210,588, +,+,+, 629957 Simple_repeat Simple_repeat 585 chrUn_NT_465816v1 16510 17104 (CGAGG)n 545 + 16510 17104 0 2 224,331, 0,263, +,+, 629963 Simple_repeat Simple_repeat 585 chrUn_NT_465817v1 1336 2234 GGXHOI 343 - 1336 2234 0 2 625,256, 0,642, -,-, 629966 Satellite W-chromosome 585 chrUn_NT_465817v1 2410 3377 GGXHOI 360 - 2410 3377 0 2 631,300, 0,667, -,-, 629967 Satellite W-chromosome 585 chrUn_NT_465817v1 5156 6535 GGXHOI 334 - 5156 6535 0 3 506,535,248, 0,569,1131, -,-,-, 629971 Satellite W-chromosome 585 chrUn_NT_465817v1 7816 8564 GGXHOI 342 - 7816 8564 0 3 256,249,160, 0,311,588, -,-,-, 629973 Satellite W-chromosome 585 chrUn_NT_465817v1 8667 10178 GGXHOI 372 - 8667 10178 0 3 143,908,382, 0,159,1129, -,-,-, 629974 Satellite W-chromosome 585 chrUn_NT_465817v1 13155 14775 GGXHOI 378 - 13155 14775 0 2 1085,472, 0,1148, -,-, 629978 Satellite W-chromosome 585 chrUn_NT_465818v1 14665 15271 GA-rich 362 + 14665 15271 0 2 355,212, 0,394, +,+, 630027 Low_complexity Low_complexity 585 chrUn_NT_465818v1 15476 15633 (GGAGT)n 166 + 15476 15633 0 2 71,37, 0,120, +,+, 630030 Simple_repeat Simple_repeat 585 chrUn_NT_465819v1 3980 4295 GGXHOI 297 . 3980 4295 0 2 143,153, 0,162, +,-, 630050 Satellite W-chromosome 585 chrUn_NT_465819v1 5454 5967 Sat-CR1_GG 210 + 5454 5967 0 2 65,257, 0,256, +,+, 630053 Satellite Satellite 585 chrUn_NT_465819v1 5854 6170 GGXHOI 298 . 5854 6170 0 2 143,154, 0,162, +,-, 630055 Satellite W-chromosome 585 chrUn_NT_465819v1 7327 7871 Sat-CR1_GG 150 + 7327 7871 0 2 104,280, 0,264, +,+, 630058 Satellite Satellite 585 chrUn_NT_465819v1 9207 9712 Sat-CR1_GG 196 + 9207 9712 0 2 63,254, 0,251, +,+, 630064 Satellite Satellite 585 chrUn_NT_465819v1 9599 9913 GGXHOI 297 . 9599 9913 0 2 143,153, 0,161, +,-, 630066 Satellite W-chromosome 585 chrUn_NT_465819v1 11083 11625 Sat-CR1_GG 168 + 11083 11625 0 2 64,286, 0,256, +,+, 630069 Satellite Satellite 585 chrUn_NT_465819v1 12969 13484 Sat-CR1_GG 178 + 12969 13484 0 2 65,257, 0,258, +,+, 630074 Satellite Satellite 585 chrUn_NT_465819v1 13371 13687 GGXHOI 298 . 13371 13687 0 2 143,154, 0,162, +,-, 630076 Satellite W-chromosome 585 chrUn_NT_465819v1 14851 15367 Sat-CR1_GG 198 + 14851 15367 0 2 104,171, 0,345, +,+, 630079 Satellite Satellite 585 chrUn_NT_465819v1 16178 16421 Sat-CR1_GG 254 + 16178 16421 0 2 72,24, 0,219, +,+, 630083 Satellite Satellite 585 chrUn_NT_465820v1 7754 9104 GGXHOI 353 - 7754 9104 0 4 427,548,131,169, 0,441,1038,1181, -,-,-,-, 630088 Satellite W-chromosome 585 chrUn_NT_465820v1 9975 12775 GGXHOI 370 - 9975 12775 0 4 615,704,681,743, 0,638,1363,2057, -,-,-,-, 630090 Satellite W-chromosome 585 chrUn_NT_465820v1 12883 13635 GGXHOI 421 - 12883 13635 0 2 354,387, 0,365, -,-, 630091 Satellite W-chromosome 585 chrUn_NT_465820v1 13778 15235 GGXHOI 417 - 13778 15235 0 3 392,385,643, 0,406,814, -,-,-, 630092 Satellite W-chromosome 585 chrUn_NT_465821v1 1739 2876 GGXHOI 436 - 1739 2876 0 3 372,273,456, 0,390,681, -,-,-, 630097 Satellite W-chromosome 585 chrUn_NT_465821v1 3189 5152 GGXHOI 434 - 3189 5152 0 3 1203,273,429, 0,1243,1534, -,-,-, 630098 Satellite W-chromosome 585 chrUn_NT_465821v1 10787 11716 GGXHOI 416 - 10787 11716 0 2 669,208, 0,721, -,-, 630108 Satellite W-chromosome 585 chrUn_NT_465821v1 12177 15468 GGXHOI 360 - 12177 15468 0 4 252,155,882,1899, 0,296,492,1392, -,-,-,-, 630109 Satellite W-chromosome 585 chrUn_NT_465821v1 15715 17054 GGXHOI 407 - 15715 17054 0 2 768,548, 0,791, -,-, 630110 Satellite W-chromosome 585 chrUn_NT_465822v1 5025 6249 CR1-H 542 + 5025 6249 0 2 1111,113, 0,1111, +,+, 630115 LINE CR1 585 chrUn_NT_465824v1 2284 2904 CR1-H 379 + 2284 2904 0 2 207,377, 0,243, +,+, 630143 LINE CR1 585 chrUn_NT_465824v1 4784 5408 CR1-H 378 + 4784 5408 0 2 209,379, 0,245, +,+, 630146 LINE CR1 585 chrUn_NT_465824v1 7289 7912 CR1-H 377 + 7289 7912 0 2 209,378, 0,245, +,+, 630149 LINE CR1 585 chrUn_NT_465824v1 9793 10417 CR1-H 378 + 9793 10417 0 2 209,379, 0,245, +,+, 630152 LINE CR1 585 chrUn_NT_465824v1 12295 12916 CR1-H 373 + 12295 12916 0 2 208,377, 0,244, +,+, 630155 LINE CR1 585 chrUn_NT_465824v1 14787 15401 CR1-H 345 + 14787 15401 0 2 204,374, 0,240, +,+, 630158 LINE CR1 585 chrUn_NT_465825v1 5062 6687 GGXHOI 390 + 5062 6687 0 2 1046,516, 0,1109, +,+, 630165 Satellite W-chromosome 585 chrUn_NT_465825v1 6786 8723 GGXHOI 369 + 6786 8723 0 2 472,1402, 0,535, +,+, 630166 Satellite W-chromosome 585 chrUn_NT_465825v1 10628 11418 GGXHOI 360 + 10628 11418 0 2 469,258, 0,532, +,+, 630170 Satellite W-chromosome 585 chrUn_NT_465825v1 11826 12586 GGXHOI 346 + 11826 12586 0 2 334,409, 0,351, +,+, 630172 Satellite W-chromosome 585 chrUn_NT_465825v1 13344 14395 GGXHOI 383 + 13344 14395 0 2 472,516, 0,535, +,+, 630174 Satellite W-chromosome 585 chrUn_NT_465825v1 14494 16100 GGXHOI 383 + 14494 16100 0 2 471,1072, 0,534, +,+, 630175 Satellite W-chromosome 585 chrUn_NT_465826v1 10473 12236 GGERVL-A-int 748 + 10473 12236 0 2 459,1304, 0,459, +,+, 630188 LTR ERVL 585 chrUn_NT_465827v1 4280 4903 CR1-H 678 - 4280 4903 0 2 139,478, 0,145, -,-, 630198 LINE CR1 585 chrUn_NT_465827v1 6931 8202 CR1-H 594 - 6931 8202 0 2 117,1154, 0,117, -,-, 630202 LINE CR1 585 chrUn_NT_465827v1 13206 13316 (TTTGC)n 336 + 13206 13316 0 2 52,9, 0,101, +,+, 630205 Simple_repeat Simple_repeat 585 chrUn_NT_465829v1 2576 16969 GGXHOI 400 + 2576 16969 0 6 3353,428,4380,2178,3677,293, 0,3368,3813,8211,10408,14100, +,+,+,+,+,+, 630217 Satellite W-chromosome 585 chrUn_NT_465830v1 1096 1746 CR1-X2 592 - 1096 1746 0 2 63,356, 0,294, -,-, 630219 LINE CR1 585 chrUn_NT_465830v1 5821 6578 CR1-C2 691 + 5821 6578 0 2 405,57, 0,700, +,+, 630227 LINE CR1 585 chrUn_NT_465831v1 16247 17072 (CCCTAA)n 538 + 16247 17072 0 3 286,271,257, 0,286,568, +,+,+, 630238 Simple_repeat Simple_repeat 585 chrUn_NT_465832v1 1724 2181 CR1-H 677 - 1724 2181 0 2 163,294, 0,163, -,-, 630242 LINE CR1 585 chrUn_NT_465834v1 6287 6910 CR1-H 677 - 6287 6910 0 2 139,478, 0,145, -,-, 630268 LINE CR1 585 chrUn_NT_465834v1 9121 9587 CR1-H 635 - 9121 9587 0 2 166,298, 0,168, -,-, 630272 LINE CR1 585 chrUn_NT_465835v1 7722 8345 CR1-H 656 - 7722 8345 0 2 138,479, 0,144, -,-, 630287 LINE CR1 585 chrUn_NT_465835v1 10641 11938 CR1-H 567 - 10641 11938 0 2 118,1179, 0,118, -,-, 630292 LINE CR1 585 chrUn_NT_465835v1 13626 13736 (TTTGC)n 312 + 13626 13736 0 2 53,8, 0,102, +,+, 630294 Simple_repeat Simple_repeat 585 chrUn_NT_465837v1 12914 14640 (CCCTAA)n 600 + 12914 14640 0 6 459,374,208,184,179,244, 0,471,845,1107,1303,1482, +,+,+,+,+,+, 630307 Simple_repeat Simple_repeat 585 chrUn_NT_465837v1 15128 15884 (CCCTAA)n 580 + 15128 15884 0 2 376,354, 0,402, +,+, 630311 Simple_repeat Simple_repeat 585 chrUn_NT_465837v1 16691 17051 (CCCTAA)n 548 + 16691 17051 0 2 113,72, 0,288, +,+, 630315 Simple_repeat Simple_repeat 585 chrUn_NT_465838v1 7014 10132 GGLTR7-int 410 - 7014 10132 0 4 277,948,1635,115, 0,324,1368,3003, -,-,-,-, 630319 LTR ERV1 585 chrUn_NT_465839v1 5490 7540 GGXHOI 368 + 5490 7540 0 2 980,1007, 0,1043, +,+, 630330 Satellite W-chromosome 585 chrUn_NT_465839v1 8292 10551 GGXHOI 381 + 8292 10551 0 3 472,1081,580, 0,535,1679, +,+,+, 630332 Satellite W-chromosome 585 chrUn_NT_465839v1 10791 11668 GGXHOI 369 + 10791 11668 0 2 302,558, 0,319, +,+, 630333 Satellite W-chromosome 585 chrUn_NT_465839v1 14283 15296 GGXHOI 309 + 14283 15296 0 2 501,486, 0,527, +,+, 630336 Satellite W-chromosome 585 chrUn_NT_465839v1 16006 17013 GGXHOI 270 + 16006 17013 0 2 562,185, 0,822, +,+, 630338 Satellite W-chromosome 585 chrUn_NT_465840v1 2499 5116 GGXHOI 407 + 2499 5116 0 3 625,493,1441, 0,662,1176, +,+,+, 630345 Satellite W-chromosome 585 chrUn_NT_465840v1 11643 12866 GGXHOI 354 + 11643 12866 0 3 475,463,231, 0,510,992, +,+,+, 630357 Satellite W-chromosome 585 chrUn_NT_465840v1 15779 16961 GGXHOI 343 + 15779 16961 0 3 158,482,427, 0,210,755, +,+,+, 630364 Satellite W-chromosome 585 chrUn_NT_465842v1 16896 16960 (CCGCC)n 358 + 16896 16960 0 2 18,18, 0,46, +,+, 630397 Simple_repeat Simple_repeat 585 chrUn_NT_465843v1 7231 7794 CR1-X 408 - 7231 7794 0 3 271,124,168, 0,271,395, -,-,-, 630405 LINE CR1 585 chrUn_NT_465843v1 14566 15364 CR1-B2 699 + 14566 15364 0 2 222,508, 0,290, +,+, 630408 LINE CR1 585 chrUn_NT_465844v1 16663 16856 A-rich 332 + 16663 16856 0 2 37,101, 0,92, +,+, 630458 Low_complexity Low_complexity 585 chrUn_NT_465845v1 4844 6766 GGLTR7-int 671 - 4844 6766 0 4 35,73,661,523, 0,35,738,1399, -,-,-,-, 630464 LTR ERV1 585 chrUn_NT_465846v1 13759 14216 CR1-H 677 + 13759 14216 0 2 296,161, 0,296, +,+, 630489 LINE CR1 585 chrUn_NT_465847v1 3204 6218 GGXHOI 399 - 3204 6218 0 4 1299,258,465,940, 0,1321,1594,2074, -,-,-,-, 630494 Satellite W-chromosome 585 chrUn_NT_465847v1 6315 14813 GGXHOI 353 - 6315 14813 0 11 582,551,200,296,179,179,252,441,1941,3020,572, 0,625,1201,1428,1735,1956,2152,2426,2924,4887,7926, -,-,-,-,-,-,-,-,-,-,-, 630495 Satellite W-chromosome 585 chrUn_NT_465847v1 15728 16984 GGXHOI 393 - 15728 16984 0 2 302,942, 0,314, -,-, 630496 Satellite W-chromosome 585 chrUn_NT_465848v1 5084 5962 GGXHOI 331 - 5084 5962 0 2 128,687, 0,191, -,-, 630498 Satellite W-chromosome 585 chrUn_NT_465848v1 7542 8463 GGXHOI 396 - 7542 8463 0 2 345,560, 0,361, -,-, 630500 Satellite W-chromosome 585 chrUn_NT_465848v1 8583 8851 GGXHOI 414 - 8583 8851 0 2 108,148, 0,120, -,-, 630501 Satellite W-chromosome 585 chrUn_NT_465848v1 9686 10302 GGXHOI 394 - 9686 10302 0 2 319,277, 0,339, -,-, 630503 Satellite W-chromosome 585 chrUn_NT_465848v1 10409 11472 GGXHOI 408 - 10409 11472 0 2 145,902, 0,161, -,-, 630504 Satellite W-chromosome 585 chrUn_NT_465848v1 12843 15997 GGXHOI 419 - 12843 15997 0 3 928,348,1828, 0,944,1326, -,-,-, 630507 Satellite W-chromosome 585 chrUn_NT_465848v1 16196 16634 GGXHOI 462 - 16196 16634 0 2 134,281, 0,157, -,-, 630508 Satellite W-chromosome 585 chrUn_NT_465849v1 10273 12682 GGLTR3F1 756 + 10273 12682 0 2 494,1913, 0,496, +,+, 630518 LTR ERVL 585 chrUn_NT_465850v1 685 1375 (CGAGG)n 536 + 685 1375 0 2 252,262, 0,428, +,+, 630526 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 2605 3629 (CGAGG)n 551 + 2605 3629 0 4 180,368,140,65, 0,229,643,959, +,+,+,+, 630535 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 4302 5129 (CGAGG)n 522 + 4302 5129 0 2 630,177, 0,650, +,+, 630540 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 7056 7905 (CGAGG)n 527 + 7056 7905 0 2 422,378, 0,471, +,+, 630547 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 8034 9311 (CGAGG)n 542 + 8034 9311 0 2 1060,33, 0,1244, +,+, 630549 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 10112 12280 (CGAGG)n 543 + 10112 12280 0 4 870,118,194,377, 0,1254,1548,1791, +,+,+,+, 630554 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 12410 13686 (CGAGG)n 538 + 12410 13686 0 2 1059,33, 0,1243, +,+, 630559 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 15087 15929 (CGAGG)n 532 + 15087 15929 0 4 143,72,69,181, 0,325,575,661, +,+,+,+, 630566 Simple_repeat Simple_repeat 585 chrUn_NT_465850v1 16217 16320 (AGGCG)n 398 + 16217 16320 0 2 33,34, 0,69, +,+, 630571 Simple_repeat Simple_repeat 585 chrUn_NT_465852v1 1528 1968 GGXHOI 355 - 1528 1968 0 2 296,132, 0,308, -,-, 630587 Satellite W-chromosome 585 chrUn_NT_465852v1 3714 4549 GGXHOI 393 - 3714 4549 0 2 383,413, 0,422, -,-, 630590 Satellite W-chromosome 585 chrUn_NT_465852v1 4730 7591 GGXHOI 406 - 4730 7591 0 4 417,1362,712,267, 0,450,1830,2594, -,-,-,-, 630591 Satellite W-chromosome 585 chrUn_NT_465852v1 13083 13958 GGXHOI 305 - 13083 13958 0 2 238,582, 0,293, -,-, 630597 Satellite W-chromosome 585 chrUn_NT_465853v1 2217 13189 GGXHOI 432 + 2217 13189 0 9 524,470,737,1391,1224,2824,406,2384,846, 0,581,1067,1816,3224,4464,7302,7725,10126, +,+,+,+,+,+,+,+,+, 630603 Satellite W-chromosome 585 chrUn_NT_465853v1 13273 14888 GGXHOI 437 + 13273 14888 0 3 258,178,1102, 0,276,513, +,+,+, 630604 Satellite W-chromosome 585 chrUn_NT_465853v1 15022 15359 GGXHOI 434 + 15022 15359 0 2 160,155, 0,182, +,+, 630605 Satellite W-chromosome 585 chrUn_NT_465854v1 1842 2475 (CGAGG)n 517 + 1842 2475 0 2 410,178, 0,455, +,+, 630614 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 3344 3647 (CGAGG)n 564 + 3344 3647 0 2 102,183, 0,120, +,+, 630620 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 4961 6185 (CGAGG)n 546 + 4961 6185 0 3 206,136,525, 0,387,699, +,+,+, 630626 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 6255 6872 (CGAGG)n 579 + 6255 6872 0 3 184,204,206, 0,207,411, +,+,+, 630630 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 6895 7420 (CGAGG)n 614 + 6895 7420 0 3 123,12,23, 0,311,502, +,+,+, 630632 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 7725 8418 (CCTCG)n 538 + 7725 8418 0 4 100,180,119,77, 0,123,319,616, +,+,+,+, 630637 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 11575 12353 (CCTCG)n 544 + 11575 12353 0 2 421,342, 0,436, +,+, 630652 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 12432 12790 (CCTCG)n 552 + 12432 12790 0 2 175,172, 0,186, +,+, 630654 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 12887 13424 (CCTCG)n 474 + 12887 13424 0 2 359,160, 0,377, +,+, 630655 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 13468 13921 (CCTCG)n 498 + 13468 13921 0 2 238,183, 0,270, +,+, 630657 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 13990 14914 (CCTCG)n 497 + 13990 14914 0 3 179,272,294, 0,179,630, +,+,+, 630659 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 14824 15160 (CCTTG)n 444 + 14824 15160 0 2 101,50, 0,286, +,+, 630661 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 15235 16512 (CCTCG)n 609 + 15235 16512 0 4 179,522,141,177, 0,204,901,1100, +,+,+,+, 630664 Simple_repeat Simple_repeat 585 chrUn_NT_465854v1 16592 16971 (CCTCG)n 565 + 16592 16971 0 2 181,178, 0,201, +,+, 630667 Simple_repeat Simple_repeat 585 chrUn_NT_465856v1 3702 4074 GGXHOI 341 - 3702 4074 0 2 119,232, 0,140, -,-, 630684 Satellite W-chromosome 585 chrUn_NT_465856v1 4384 5199 (CAAGG)n 527 + 4384 5199 0 3 225,9,384, 0,411,431, +,+,+, 630685 Simple_repeat Simple_repeat 585 chrUn_NT_465856v1 5346 6226 (CCTTG)n 476 + 5346 6226 0 3 330,294,193, 0,351,687, +,+,+, 630688 Simple_repeat Simple_repeat 585 chrUn_NT_465856v1 8169 8816 (CCTTG)n 439 + 8169 8816 0 2 193,454, 0,193, +,+, 630696 Simple_repeat Simple_repeat 585 chrUn_NT_465856v1 9306 11013 GGXHOI 387 - 9306 11013 0 2 598,1047, 0,660, -,-, 630700 Satellite W-chromosome 585 chrUn_NT_465857v1 149 522 (CAGAA)n 554 + 149 522 0 2 180,181, 0,192, +,+, 630710 Simple_repeat Simple_repeat 585 chrUn_NT_465857v1 1938 2310 (AATAG)n 560 + 1938 2310 0 2 180,192, 0,180, +,+, 630719 Simple_repeat Simple_repeat 585 chrUn_NT_465857v1 2376 2760 (AATAG)n 538 + 2376 2760 0 2 98,106, 0,278, +,+, 630721 Simple_repeat Simple_repeat 585 chrUn_NT_465857v1 2757 3525 (CAGAA)n 568 + 2757 3525 0 2 235,205, 0,563, +,+, 630723 Simple_repeat Simple_repeat 585 chrUn_NT_465857v1 4099 4196 CR1-E 610 - 4099 4196 0 2 53,44, 0,53, -,-, 630728 LINE CR1 585 chrUn_NT_465857v1 4790 4888 CR1-C4 666 - 4790 4888 0 2 62,36, 0,62, -,-, 630735 LINE CR1 585 chrUn_NT_465857v1 4890 4984 CR1-E 668 - 4890 4984 0 2 48,46, 0,48, -,-, 630736 LINE CR1 585 chrUn_NT_465857v1 5723 5822 CR1-C4 653 - 5723 5822 0 2 52,45, 0,54, -,-, 630744 LINE CR1 585 chrUn_NT_465857v1 6552 7796 CR1-C4 609 - 6552 7796 0 2 62,45, 0,1199, -,-, 630748 LINE CR1 585 chrUn_NT_465857v1 7338 7429 CR1-C4 668 - 7338 7429 0 2 43,48, 0,43, -,-, 630754 LINE CR1 585 chrUn_NT_465857v1 7879 7977 CR1-C4 691 - 7879 7977 0 2 51,45, 0,53, -,-, 630758 LINE CR1 585 chrUn_NT_465857v1 8060 8158 CR1-E 680 - 8060 8158 0 2 62,36, 0,62, -,-, 630759 LINE CR1 585 chrUn_NT_465857v1 9291 9390 CR1-C4 634 - 9291 9390 0 2 62,37, 0,62, -,-, 630769 LINE CR1 585 chrUn_NT_465857v1 10074 10167 CR1-C4 627 - 10074 10167 0 2 45,48, 0,45, -,-, 630777 LINE CR1 585 chrUn_NT_465857v1 11635 11726 CR1-C4 668 - 11635 11726 0 2 43,48, 0,43, -,-, 630787 LINE CR1 585 chrUn_NT_465857v1 15010 15103 CR1-C4 627 - 15010 15103 0 2 45,48, 0,45, -,-, 630817 LINE CR1 585 chrUn_NT_465858v1 1994 3350 CR1-H 672 + 1994 3350 0 2 1243,113, 0,1243, +,+, 630829 LINE CR1 585 chrUn_NT_465858v1 6597 7220 CR1-H 673 + 6597 7220 0 2 478,139, 0,484, +,+, 630832 LINE CR1 585 chrUn_NT_465859v1 15608 16881 GGLTR7-int 295 - 15608 16881 0 2 277,949, 0,324, -,-, 630858 LTR ERV1 585 chrUn_NT_465860v1 7686 8309 CR1-H 675 - 7686 8309 0 2 139,478, 0,145, -,-, 630866 LINE CR1 585 chrUn_NT_465860v1 10771 12090 CR1-H 597 - 10771 12090 0 2 117,1202, 0,117, -,-, 630871 LINE CR1 585 chrUn_NT_465860v1 13831 13940 (TTTGC)n 326 + 13831 13940 0 2 52,8, 0,101, +,+, 630872 Simple_repeat Simple_repeat 585 chrUn_NT_465861v1 1154 2519 GGLTR7-int 277 + 1154 2519 0 3 102,172,279, 0,128,1086, +,+,+, 630879 LTR ERV1 585 chrUn_NT_465861v1 6806 7110 (CCCACAT)n 356 + 6806 7110 0 2 178,35, 0,269, +,+, 630882 Simple_repeat Simple_repeat 585 chrUn_NT_465861v1 10559 10797 G-rich 283 + 10559 10797 0 2 75,122, 0,116, +,+, 630891 Low_complexity Low_complexity 585 chrUn_NT_465861v1 12962 13510 (CCTTG)n 616 + 12962 13510 0 2 216,328, 0,220, +,+, 630895 Simple_repeat Simple_repeat 585 chrUn_NT_465861v1 13504 14490 (GCCTG)n 512 + 13504 14490 0 4 211,77,131,205, 0,389,466,781, +,+,+,+, 630896 Simple_repeat Simple_repeat 585 chrUn_NT_465861v1 14633 15250 (GCCTG)n 504 + 14633 15250 0 2 300,129, 0,488, +,+, 630901 Simple_repeat Simple_repeat 585 chrUn_NT_465862v1 1386 2492 CR1-B2 649 - 1386 2492 0 2 876,226, 0,880, -,-, 630908 LINE CR1 585 chrUn_NT_465862v1 8093 8397 CR1-X 513 - 8093 8397 0 3 50,78,165, 0,60,139, -,-,-, 630913 LINE CR1 585 chrUn_NT_465862v1 15235 15937 CR1-B2 720 - 15235 15937 0 2 474,225, 0,477, -,-, 630923 LINE CR1 585 chrUn_NT_465863v1 2843 5000 CR1-C 869 + 2843 5000 0 2 1549,608, 0,1549, +,+, 630928 LINE CR1 585 chrUn_NT_465865v1 11569 12710 CR1-D 733 + 11569 12710 0 2 328,793, 0,348, +,+, 630956 LINE CR1 585 chrUn_NT_465866v1 15148 16796 GGXHOI 324 + 15148 16796 0 5 255,587,203,166,298, 0,311,930,1154,1350, +,+,+,+,+, 630977 Satellite W-chromosome 585 chrUn_NT_465867v1 734 1181 (CAGGC)n 516 + 734 1181 0 2 233,214, 0,233, +,+, 630982 Simple_repeat Simple_repeat 585 chrUn_NT_465867v1 1688 2195 (CAAGG)n 656 + 1688 2195 0 2 262,245, 0,262, +,+, 630988 Simple_repeat Simple_repeat 585 chrUn_NT_465867v1 2226 2906 (CAGGC)n 553 + 2226 2906 0 2 198,482, 0,198, +,+, 630989 Simple_repeat Simple_repeat 585 chrUn_NT_465867v1 15597 16941 GGLTR7-int 313 - 15597 16941 0 3 245,232,101, 0,1009,1243, -,-,-, 631001 LTR ERV1 585 chrUn_NT_465868v1 3881 4609 (CAAGG)n 537 + 3881 4609 0 3 106,229,178, 0,303,550, +,+,+, 631003 Simple_repeat Simple_repeat 585 chrUn_NT_465868v1 4838 5696 (CAAGG)n 568 + 4838 5696 0 3 181,186,119, 0,375,739, +,+,+, 631006 Simple_repeat Simple_repeat 585 chrUn_NT_465868v1 6084 6642 (CAAGG)n 604 + 6084 6642 0 2 267,98, 0,460, +,+, 631013 Simple_repeat Simple_repeat 585 chrUn_NT_465868v1 6696 7742 (CAAGG)n 612 + 6696 7742 0 3 185,122,196, 0,185,850, +,+,+, 631016 Simple_repeat Simple_repeat 585 chrUn_NT_465868v1 7003 7546 (CAGGC)n 502 + 7003 7546 0 2 178,365, 0,178, +,+, 631017 Simple_repeat Simple_repeat 585 chrUn_NT_465868v1 8941 13359 GGXHOI 394 - 8941 13359 0 5 1025,1484,1100,180,485, 0,1079,2595,3721,3933, -,-,-,-,-, 631021 Satellite W-chromosome 585 chrUn_NT_465868v1 13449 14094 GGXHOI 369 - 13449 14094 0 2 520,100, 0,545, -,-, 631022 Satellite W-chromosome 585 chrUn_NT_465868v1 15005 16939 GGXHOI 369 - 15005 16939 0 2 1599,303, 0,1631, -,-, 631024 Satellite W-chromosome 585 chrUn_NT_465870v1 8720 15823 GGXHOI 446 + 8720 15823 0 9 447,987,1478,64,434,981,64,1432,1049, 0,460,1462,2997,3081,3527,4523,4607,6054, +,+,+,+,+,+,+,+,+, 631047 Satellite W-chromosome 585 chrUn_NT_465870v1 15951 16521 GGXHOI 384 + 15951 16521 0 2 332,223, 0,347, +,+, 631048 Satellite W-chromosome 585 chrUn_NT_465871v1 4600 5290 (CAGA)n 607 + 4600 5290 0 3 230,210,244, 0,236,446, +,+,+, 631054 Simple_repeat Simple_repeat 585 chrUn_NT_465871v1 14958 16203 (ACCCATTGGG)n 559 - 14958 16203 0 6 200,118,135,110,179,52, 0,337,478,727,837,1193, -,-,-,-,-,-, 631066 Satellite Satellite 585 chrUn_NT_465871v1 16416 16900 (ACCCATTGGG)n 540 + 16416 16900 0 2 311,127, 0,357, +,+, 631072 Satellite Satellite 585 chrUn_NT_465873v1 6658 9783 GGLTR7-int 403 + 6658 9783 0 4 116,1644,920,270, 0,117,1855,2855, +,+,+,+, 631099 LTR ERV1 585 chrUn_NT_465875v1 929 1448 (CGAGG)n 605 + 929 1448 0 2 312,176, 0,343, +,+, 631143 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 1584 2521 (CGAGG)n 502 + 1584 2521 0 3 281,307,278, 0,336,659, +,+,+, 631145 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 3703 6013 (CGAGG)n 462 + 3703 6013 0 4 1125,67,319,317, 0,1393,1629,1993, +,+,+,+, 631149 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 6134 6492 (CGAGG)n 482 + 6134 6492 0 2 97,76, 0,282, +,+, 631154 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 7548 9235 (CGAGG)n 507 + 7548 9235 0 3 367,949,82, 0,397,1605, +,+,+, 631160 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 9365 10005 (CGAGG)n 547 + 9365 10005 0 2 441,179, 0,461, +,+, 631163 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 11636 12563 (CGAGG)n 543 + 11636 12563 0 4 97,179,366,178, 0,115,334,749, +,+,+,+, 631173 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 12709 14250 (CGAGG)n 540 + 12709 14250 0 4 271,448,40,506, 0,311,937,1035, +,+,+,+, 631175 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 14866 15180 (CGAGG)n 528 + 14866 15180 0 2 95,35, 0,279, +,+, 631182 Simple_repeat Simple_repeat 585 chrUn_NT_465875v1 15426 16185 (CGAGG)n 540 + 15426 16185 0 3 349,176,179, 0,365,580, +,+,+, 631185 Simple_repeat Simple_repeat 585 chrUn_NT_465876v1 2009 3916 GGXHOI 505 - 2009 3916 0 3 19,158,1408, 0,330,499, -,-,-, 631191 Satellite W-chromosome 585 chrUn_NT_465876v1 4050 5154 GGXHOI 479 - 4050 5154 0 2 388,671, 0,433, -,-, 631193 Satellite W-chromosome 585 chrUn_NT_465876v1 5266 6108 GGXHOI 416 - 5266 6108 0 3 158,162,29, 0,171,813, -,-,-, 631194 Satellite W-chromosome 585 chrUn_NT_465876v1 6678 7158 GGXHOI 525 - 6678 7158 0 2 328,123, 0,357, -,-, 631197 Satellite W-chromosome 585 chrUn_NT_465876v1 7535 10747 GGXHOI 530 - 7535 10747 0 6 221,241,301,238,194,150, 0,668,1106,1857,2419,3062, -,-,-,-,-,-, 631199 Satellite W-chromosome 585 chrUn_NT_465876v1 10813 11919 GGXHOI 508 - 10813 11919 0 2 36,776, 0,330, -,-, 631205 Satellite W-chromosome 585 chrUn_NT_465876v1 11984 13039 GGXHOI 467 - 11984 13039 0 3 146,333,208, 0,157,847, -,-,-, 631207 Satellite W-chromosome 585 chrUn_NT_465876v1 13115 13876 GGXHOI 504 - 13115 13876 0 3 19,320,126, 0,300,635, -,-,-, 631209 Satellite W-chromosome 585 chrUn_NT_465876v1 14230 14906 GGXHOI 486 - 14230 14906 0 2 147,39, 0,637, -,-, 631212 Satellite W-chromosome 585 chrUn_NT_465876v1 14981 16681 GGXHOI 514 - 14981 16681 0 4 125,189,253,216, 0,321,936,1484, -,-,-,-, 631214 Satellite W-chromosome 585 chrUn_NT_465877v1 8733 9190 CR1-H 677 + 8733 9190 0 2 296,161, 0,296, +,+, 631229 LINE CR1 585 chrUn_NT_465877v1 11372 11995 CR1-H 679 + 11372 11995 0 2 478,139, 0,484, +,+, 631233 LINE CR1 585 chrUn_NT_465878v1 2055 4795 GGERVL-B-int 705 + 2055 4795 0 2 1827,913, 0,1827, +,+, 631241 LTR ERVL 585 chrUn_NT_465878v1 5533 6929 GGLTR7-int 316 + 5533 6929 0 3 101,314,281, 0,103,1115, +,+,+, 631243 LTR ERV1 585 chrUn_NT_465879v1 1889 3225 GGXHOI 363 - 1889 3225 0 2 801,522, 0,814, -,-, 631261 Satellite W-chromosome 585 chrUn_NT_465879v1 3302 3831 GGXHOI 340 - 3302 3831 0 2 375,138, 0,391, -,-, 631262 Satellite W-chromosome 585 chrUn_NT_465879v1 3900 4378 GGXHOI 354 - 3900 4378 0 2 150,309, 0,169, -,-, 631263 Satellite W-chromosome 585 chrUn_NT_465879v1 4548 5251 GGXHOI 302 - 4548 5251 0 2 401,288, 0,415, -,-, 631264 Satellite W-chromosome 585 chrUn_NT_465879v1 5833 7562 GGXHOI 357 - 5833 7562 0 3 943,440,289, 0,957,1440, -,-,-, 631266 Satellite W-chromosome 585 chrUn_NT_465879v1 7681 8991 GGXHOI 403 - 7681 8991 0 2 961,329, 0,981, -,-, 631267 Satellite W-chromosome 585 chrUn_NT_465879v1 9553 11399 GGXHOI 399 - 9553 11399 0 2 1422,397, 0,1449, -,-, 631269 Satellite W-chromosome 585 chrUn_NT_465879v1 11644 16869 GGXHOI 394 - 11644 16869 0 4 1697,995,2134,341, 0,1717,2737,4884, -,-,-,-, 631270 Satellite W-chromosome 585 chrUn_NT_465880v1 1612 2305 (ACCCCATAGGG)n 404 - 1612 2305 0 3 136,152,355, 0,147,338, -,-,-, 631272 Satellite Satellite 585 chrUn_NT_465880v1 2626 3169 (ACCCCATAGGG)n 470 + 2626 3169 0 3 230,139,158, 0,246,385, +,+,+, 631275 Satellite Satellite 585 chrUn_NT_465880v1 11455 12374 (ACCCCATAGGG)n 400 - 11455 12374 0 2 163,285, 0,634, -,-, 631278 Satellite Satellite 585 chrUn_NT_465880v1 11771 12089 (ACCCATAGAG)n 330 + 11771 12089 0 2 132,144, 0,174, +,+, 631280 Satellite Satellite 585 chrUn_NT_465880v1 12069 12494 (CTCTATGGGG)n 426 - 12069 12494 0 2 72,221, 0,204, -,-, 631282 Satellite Satellite 585 chrUn_NT_465880v1 12141 12770 (ACCCCATAGGG)n 394 + 12141 12770 0 3 132,256,100, 0,153,529, +,+,+, 631283 Satellite Satellite 585 chrUn_NT_465880v1 14461 15600 (ACCCCATAGGG)n 536 - 14461 15600 0 4 182,123,186,406, 0,234,410,733, -,-,-,-, 631287 Satellite Satellite 585 chrUn_NT_465880v1 15976 16212 (CTCTATGGGG)n 372 + 15976 16212 0 2 59,37, 0,199, +,+, 631291 Satellite Satellite 585 chrUn_NT_465880v1 16325 16951 (ACCCCATAGGG)n 535 - 16325 16951 0 3 134,276,41, 0,185,585, -,-,-, 631294 Satellite Satellite 585 chrUn_NT_465881v1 10025 11778 GGERVL-A-int 745 - 10025 11778 0 2 1296,457, 0,1296, -,-, 631298 LTR ERVL 585 chrUn_NT_465882v1 2901 3420 GGXHOI 352 - 2901 3420 0 2 344,120, 0,399, -,-, 631303 Satellite W-chromosome 585 chrUn_NT_465882v1 4360 5440 GGXHOI 404 - 4360 5440 0 3 673,224,131, 0,711,949, -,-,-, 631305 Satellite W-chromosome 585 chrUn_NT_465882v1 5561 6361 GGXHOI 290 - 5561 6361 0 3 247,357,151, 0,277,649, -,-,-, 631306 Satellite W-chromosome 585 chrUn_NT_465882v1 6591 7615 GGXHOI 400 - 6591 7615 0 5 141,135,211,133,221, 0,190,366,616,803, -,-,-,-,-, 631307 Satellite W-chromosome 585 chrUn_NT_465882v1 7692 8583 GGXHOI 378 - 7692 8583 0 2 697,181, 0,710, -,-, 631308 Satellite W-chromosome 585 chrUn_NT_465882v1 8679 9861 GGXHOI 453 - 8679 9861 0 3 876,137,138, 0,891,1044, -,-,-, 631309 Satellite W-chromosome 585 chrUn_NT_465882v1 10166 13261 GGXHOI 398 - 10166 13261 0 14 137,107,400,198,302,181,89,228,170,93,209,129,144,347, 0,177,322,735,947,1284,1510,1613,1859,2046,2162,2385,2546,2748, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 631311 Satellite W-chromosome 585 chrUn_NT_465882v1 13984 15134 GGXHOI 334 - 13984 15134 0 5 237,309,129,134,182, 0,273,623,799,968, -,-,-,-,-, 631314 Satellite W-chromosome 585 chrUn_NT_465882v1 15678 16074 GGXHOI 409 - 15678 16074 0 2 206,135, 0,261, -,-, 631316 Satellite W-chromosome 585 chrUn_NT_465882v1 16224 16892 GGXHOI 427 - 16224 16892 0 3 316,222,66, 0,368,602, -,-,-, 631317 Satellite W-chromosome 585 chrUn_NT_465883v1 7977 8819 G-rich 348 + 7977 8819 0 2 425,362, 0,480, +,+, 631326 Low_complexity Low_complexity 585 chrUn_NT_465883v1 11505 13965 GGLTR7-int 600 + 11505 13965 0 2 339,793, 0,1667, +,+, 631331 LTR ERV1 585 chrUn_NT_465883v1 14144 16201 GGLTR10D-int 908 - 14144 16201 0 2 363,1691, 0,366, -,-, 631335 LTR ERVK 585 chrUn_NT_465884v1 2578 4116 GGXHOI 377 - 2578 4116 0 2 1003,472, 0,1066, -,-, 631344 Satellite W-chromosome 585 chrUn_NT_465884v1 4215 5840 GGXHOI 387 - 4215 5840 0 2 516,1046, 0,579, -,-, 631345 Satellite W-chromosome 585 chrUn_NT_465885v1 3298 8669 GGXHOI 410 + 3298 8669 0 4 244,629,3601,810, 0,264,946,4561, +,+,+,+, 631362 Satellite W-chromosome 585 chrUn_NT_465885v1 8734 10941 GGXHOI 403 + 8734 10941 0 2 1054,1090, 0,1117, +,+, 631363 Satellite W-chromosome 585 chrUn_NT_465885v1 11588 12102 GGXHOI 353 + 11588 12102 0 2 314,145, 0,369, +,+, 631365 Satellite W-chromosome 585 chrUn_NT_465885v1 12194 16526 GGXHOI 390 + 12194 16526 0 4 1914,1786,331,152, 0,1973,3792,4180, +,+,+,+, 631366 Satellite W-chromosome 585 chrUn_NT_465886v1 9887 10017 CR1-Y 653 + 9887 10017 0 2 34,96, 0,34, +,+, 631374 LINE CR1 585 chrUn_NT_465886v1 12986 13583 Z-REP 396 + 12986 13583 0 2 273,286, 0,311, +,+, 631378 Satellite macro 585 chrUn_NT_465887v1 2063 7933 GGXHOI 423 - 2063 7933 0 12 102,433,445,1419,292,147,661,221,154,630,626,448, 0,159,646,1112,2554,2864,3027,3706,3944,4134,4781,5422, -,-,-,-,-,-,-,-,-,-,-,-, 631381 Satellite W-chromosome 585 chrUn_NT_465887v1 8033 9817 GGXHOI 419 - 8033 9817 0 6 227,353,174,52,135,741, 0,275,639,827,897,1043, -,-,-,-,-,-, 631382 Satellite W-chromosome 585 chrUn_NT_465887v1 9933 10841 GGXHOI 398 - 9933 10841 0 5 137,121,144,137,218, 0,154,324,509,690, -,-,-,-,-, 631383 Satellite W-chromosome 585 chrUn_NT_465887v1 10924 12550 GGXHOI 368 - 10924 12550 0 4 175,136,1108,134, 0,217,370,1492, -,-,-,-, 631384 Satellite W-chromosome 585 chrUn_NT_465887v1 12635 14916 GGXHOI 362 - 12635 14916 0 5 128,502,766,472,299, 0,152,709,1492,1982, -,-,-,-,-, 631385 Satellite W-chromosome 585 chrUn_NT_465887v1 15031 16205 GGXHOI 355 - 15031 16205 0 3 127,381,612, 0,145,562, -,-,-, 631386 Satellite W-chromosome 585 chrUn_NT_465888v1 1037 1660 CR1-H 666 - 1037 1660 0 2 138,479, 0,144, -,-, 631389 LINE CR1 585 chrUn_NT_465888v1 5014 6278 CR1-H 588 - 5014 6278 0 2 116,1148, 0,116, -,-, 631393 LINE CR1 585 chrUn_NT_465889v1 6347 6548 CR1-X 439 - 6347 6548 0 2 155,46, 0,155, -,-, 631410 LINE CR1 585 chrUn_NT_465889v1 13108 14217 CR1-B2 691 - 13108 14217 0 2 880,226, 0,883, -,-, 631420 LINE CR1 585 chrUn_NT_465890v1 7214 8013 CR1-H 777 - 7214 8013 0 2 245,554, 0,245, -,-, 631431 LINE CR1 585 chrUn_NT_465890v1 14264 16120 GGLTR7-int 445 + 14264 16120 0 2 1151,72, 0,1784, +,+, 631434 LTR ERV1 585 chrUn_NT_465891v1 15092 15220 (C)n 743 + 15092 15220 0 2 43,24, 0,104, +,+, 631461 Simple_repeat Simple_repeat 585 chrUn_NT_465892v1 3792 4307 Sat-CR1_GG 194 - 3792 4307 0 2 256,98, 0,417, -,-, 631477 Satellite Satellite 585 chrUn_NT_465892v1 5481 5797 GGXHOI 298 . 5481 5797 0 2 154,143, 0,173, +,-, 631481 Satellite W-chromosome 585 chrUn_NT_465892v1 5684 6198 Sat-CR1_GG 184 - 5684 6198 0 2 256,65, 0,449, -,-, 631482 Satellite Satellite 585 chrUn_NT_465892v1 7543 8083 Sat-CR1_GG 178 - 7543 8083 0 2 283,97, 0,443, -,-, 631487 Satellite Satellite 585 chrUn_NT_465892v1 9459 9972 Sat-CR1_GG 190 - 9459 9972 0 2 256,96, 0,417, -,-, 631492 Satellite Satellite 585 chrUn_NT_465892v1 11342 11864 Sat-CR1_GG 220 - 11342 11864 0 2 258,104, 0,418, -,-, 631497 Satellite Satellite 585 chrUn_NT_465892v1 14984 15408 Sat-CR1_GG 184 - 14984 15408 0 2 167,65, 0,359, -,-, 631507 Satellite Satellite 585 chrUn_NT_465893v1 9277 11566 GGLTR7-int 580 + 9277 11566 0 3 336,370,792, 0,805,1497, +,+,+, 631527 LTR ERV1 585 chrUn_NT_465893v1 11739 13856 GGLTR10C-int 799 - 11739 13856 0 2 340,1777, 0,340, -,-, 631530 LTR ERVK 585 chrUn_NT_465893v1 14884 15308 (CGAGG)n 606 + 14884 15308 0 2 187,237, 0,187, +,+, 631538 Simple_repeat Simple_repeat 585 chrUn_NT_465893v1 15354 15820 (CGAGG)n 634 + 15354 15820 0 2 152,133, 0,333, +,+, 631540 Simple_repeat Simple_repeat 585 chrUn_NT_465893v1 15861 16861 (CGAGG)n 576 + 15861 16861 0 3 181,303,157, 0,361,843, +,+,+, 631543 Simple_repeat Simple_repeat 585 chrUn_NT_465894v1 684 2452 GGERVL-A-int 728 - 684 2452 0 2 1307,461, 0,1307, -,-, 631547 LTR ERVL 585 chrUn_NT_465895v1 698 1350 GGXHOI 366 + 698 1350 0 2 102,497, 0,155, +,+, 631559 Satellite W-chromosome 585 chrUn_NT_465895v1 1572 9237 GGXHOI 371 + 1572 9237 0 3 2501,4912,217, 0,2521,7448, +,+,+, 631560 Satellite W-chromosome 585 chrUn_NT_465895v1 9310 16537 GGXHOI 378 + 9310 16537 0 4 334,4814,1670,300, 0,373,5203,6927, +,+,+,+, 631561 Satellite W-chromosome 585 chrUn_NT_465896v1 2409 5991 GGXHOI 574 - 2409 5991 0 3 1694,457,941, 0,1943,2641, -,-,-, 631566 Satellite W-chromosome 585 chrUn_NT_465896v1 6064 12060 GGXHOI 561 - 6064 12060 0 5 392,87,11,18,2853, 0,2340,2462,3094,3143, -,-,-,-,-, 631568 Satellite W-chromosome 585 chrUn_NT_465896v1 15211 16864 GGXHOI 562 - 15211 16864 0 4 159,51,209,20, 0,648,947,1633, -,-,-,-, 631575 Satellite W-chromosome 585 chrUn_NT_465897v1 1384 2010 GGXHOI 354 + 1384 2010 0 2 404,180, 0,446, +,+, 631580 Satellite W-chromosome 585 chrUn_NT_465897v1 2110 4469 GGXHOI 360 + 2110 4469 0 2 2127,217, 0,2142, +,+, 631581 Satellite W-chromosome 585 chrUn_NT_465897v1 4645 5143 GGXHOI 241 + 4645 5143 0 2 258,193, 0,305, +,+, 631582 Satellite W-chromosome 585 chrUn_NT_465897v1 6908 13774 GGXHOI 397 + 6908 13774 0 10 655,758,1044,914,587,467,306,305,1353,306, 0,671,1449,2510,3447,4050,4534,4863,5190,6560, +,+,+,+,+,+,+,+,+,+, 631585 Satellite W-chromosome 585 chrUn_NT_465897v1 14131 15168 GGXHOI 397 + 14131 15168 0 2 750,270, 0,767, +,+, 631586 Satellite W-chromosome 585 chrUn_NT_465898v1 2189 3552 GGXHOI 534 - 2189 3552 0 3 283,22,15, 0,503,1348, -,-,-, 631592 Satellite W-chromosome 585 chrUn_NT_465898v1 3631 10868 GGXHOI 523 - 3631 10868 0 6 131,157,324,164,122,681, 0,162,1783,2581,4038,6556, -,-,-,-,-,-, 631595 Satellite W-chromosome 585 chrUn_NT_465898v1 14088 16858 GGXHOI 578 - 14088 16858 0 4 115,330,170,382, 0,863,1471,2388, -,-,-,-, 631607 Satellite W-chromosome 585 chrUn_NT_465899v1 2979 3535 GGXHOI 365 - 2979 3535 0 2 268,271, 0,285, -,-, 631615 Satellite W-chromosome 585 chrUn_NT_465899v1 5032 8097 GGXHOI 375 - 5032 8097 0 4 348,1335,714,532, 0,364,1762,2533, -,-,-,-, 631618 Satellite W-chromosome 585 chrUn_NT_465899v1 9534 10911 GGXHOI 349 - 9534 10911 0 2 268,1092, 0,285, -,-, 631620 Satellite W-chromosome 585 chrUn_NT_465899v1 11586 13908 GGXHOI 375 - 11586 13908 0 3 346,1012,915, 0,362,1407, -,-,-, 631622 Satellite W-chromosome 585 chrUn_NT_465899v1 14823 15925 GGXHOI 338 - 14823 15925 0 2 588,457, 0,645, -,-, 631624 Satellite W-chromosome 585 chrUn_NT_465899v1 16108 16705 GGXHOI 330 - 16108 16705 0 2 365,200, 0,397, -,-, 631625 Satellite W-chromosome 585 chrUn_NT_465900v1 2270 10184 GGXHOI 400 - 2270 10184 0 7 428,1556,965,1462,517,2298,536, 0,442,2019,3047,4524,5063,7378, -,-,-,-,-,-,-, 631627 Satellite W-chromosome 585 chrUn_NT_465901v1 1216 11997 GGXHOI 445 + 1216 11997 0 12 536,868,1467,749,272,2233,227,153,1797,1338,274,684, 0,554,1439,2917,3682,3971,6221,6464,6633,8447,9807,10097, +,+,+,+,+,+,+,+,+,+,+,+, 631631 Satellite W-chromosome 585 chrUn_NT_465901v1 12084 16812 GGXHOI 432 + 12084 16812 0 9 276,1691,138,435,103,317,712,135,758, 0,292,2004,2156,2613,2732,3061,3789,3970, +,+,+,+,+,+,+,+,+, 631632 Satellite W-chromosome 585 chrUn_NT_465902v1 1273 2309 (CCTTG)n 558 + 1273 2309 0 3 328,233,105, 0,519,931, +,+,+, 631637 Simple_repeat Simple_repeat 585 chrUn_NT_465902v1 15124 16826 CR1-C 775 - 15124 16826 0 2 583,1119, 0,583, -,-, 631652 LINE CR1 585 chrUn_NT_465903v1 2977 3963 GGXHOI 419 - 2977 3963 0 3 481,146,336, 0,493,650, -,-,-, 631655 Satellite W-chromosome 585 chrUn_NT_465903v1 4046 9819 GGXHOI 390 - 4046 9819 0 5 2129,445,1667,912,548, 0,2144,2611,4296,5225, -,-,-,-,-, 631656 Satellite W-chromosome 585 chrUn_NT_465903v1 10387 13238 GGXHOI 403 - 10387 13238 0 7 643,844,144,775,110,147,106, 0,658,1515,1670,2462,2585,2745, -,-,-,-,-,-,-, 631659 Satellite W-chromosome 585 chrUn_NT_465903v1 13550 14966 GGXHOI 400 - 13550 14966 0 2 439,963, 0,453, -,-, 631660 Satellite W-chromosome 585 chrUn_NT_465903v1 15105 15872 GGXHOI 428 - 15105 15872 0 2 521,225, 0,542, -,-, 631661 Satellite W-chromosome 585 chrUn_NT_465903v1 16181 16827 GGXHOI 386 - 16181 16827 0 3 360,100,149, 0,371,497, -,-,-, 631662 Satellite W-chromosome 585 chrUn_NT_465904v1 4494 5025 GGXHOI 311 - 4494 5025 0 3 182,157,159, 0,197,372, -,-,-, 631665 Satellite W-chromosome 585 chrUn_NT_465904v1 5116 16824 GGXHOI 493 - 5116 16824 0 18 142,400,590,522,228,159,264,358,145,2262,898,145,473,272,2050,845,1050,515, 0,164,581,1186,1730,1980,2186,2466,2846,3048,5326,6246,6412,6899,7188,9260,10127,11193, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 631666 Satellite W-chromosome 585 chrUn_NT_465906v1 883 2571 GGXHOI 369 + 883 2571 0 4 623,407,254,304, 0,659,1088,1384, +,+,+,+, 631680 Satellite W-chromosome 585 chrUn_NT_465906v1 3141 3584 GGXHOI 370 - 3141 3584 0 2 135,246, 0,197, -,-, 631683 Satellite W-chromosome 585 chrUn_NT_465906v1 3672 4814 GGXHOI 360 - 3672 4814 0 2 723,397, 0,745, -,-, 631684 Satellite W-chromosome 585 chrUn_NT_465906v1 6726 8593 GGXHOI 402 - 6726 8593 0 2 1441,404, 0,1463, -,-, 631690 Satellite W-chromosome 585 chrUn_NT_465906v1 9341 10505 GGXHOI 394 - 9341 10505 0 2 730,412, 0,752, -,-, 631693 Satellite W-chromosome 585 chrUn_NT_465906v1 12447 13063 GGXHOI 432 - 12447 13063 0 2 317,246, 0,370, -,-, 631698 Satellite W-chromosome 585 chrUn_NT_465906v1 13151 15032 GGXHOI 401 - 13151 15032 0 2 731,1128, 0,753, -,-, 631699 Satellite W-chromosome 585 chrUn_NT_465906v1 15119 16824 GGXHOI 383 - 15119 16824 0 2 728,954, 0,751, -,-, 631700 Satellite W-chromosome 585 chrUn_NT_465907v1 9166 10001 (ACCCCATAGGG)n 652 - 9166 10001 0 2 130,683, 0,152, -,-, 631706 Satellite Satellite 585 chrUn_NT_465907v1 10428 11727 (ACCCCATAGGG)n 573 - 10428 11727 0 6 122,485,130,135,132,132, 0,163,695,869,1015,1167, -,-,-,-,-,-, 631708 Satellite Satellite 585 chrUn_NT_465907v1 14468 14746 (GGGTCCATTTA)n 731 + 14468 14746 0 2 90,131, 0,147, +,+, 631712 Simple_repeat Simple_repeat 585 chrUn_NT_465907v1 16141 16367 (CCCAGTATGG)n 689 + 16141 16367 0 2 111,69, 0,157, +,+, 631715 Simple_repeat Simple_repeat 585 chrUn_NT_465908v1 3562 5183 GGXHOI 536 - 3562 5183 0 2 615,313, 0,1308, -,-, 631720 Satellite W-chromosome 585 chrUn_NT_465908v1 5199 5542 Sat-CR1_GG 190 - 5199 5542 0 2 21,72, 0,271, -,-, 631722 Satellite Satellite 585 chrUn_NT_465908v1 5510 7660 GGXHOI 580 - 5510 7660 0 2 363,1113, 0,1037, -,-, 631724 Satellite W-chromosome 585 chrUn_NT_465908v1 7703 16821 GGXHOI 557 - 7703 16821 0 15 439,151,145,248,942,571,298,148,460,48,367,456,36,149,168, 0,497,693,1390,1657,3024,3832,4141,4963,6097,6187,7228,8159,8245,8950, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 631727 Satellite W-chromosome 585 chrUn_NT_465909v1 1134 4300 GGXHOI 562 - 1134 4300 0 2 2713,62, 0,3104, -,-, 631738 Satellite W-chromosome 585 chrUn_NT_465909v1 4372 5536 GGXHOI 556 - 4372 5536 0 2 175,233, 0,931, -,-, 631740 Satellite W-chromosome 585 chrUn_NT_465909v1 6242 8451 GGXHOI 560 - 6242 8451 0 3 611,206,506, 0,999,1703, -,-,-, 631743 Satellite W-chromosome 585 chrUn_NT_465909v1 8503 13762 GGXHOI 566 - 8503 13762 0 2 472,28, 0,5231, -,-, 631747 Satellite W-chromosome 585 chrUn_NT_465909v1 15876 16785 GGXHOI 526 - 15876 16785 0 2 149,438, 0,471, -,-, 631754 Satellite W-chromosome 585 chrUn_NT_465910v1 564 1433 (CAAGG)n 392 + 564 1433 0 2 508,317, 0,552, +,+, 631760 Simple_repeat Simple_repeat 585 chrUn_NT_465910v1 1431 2048 (CCTTG)n 452 + 1431 2048 0 2 313,120, 0,497, +,+, 631761 Simple_repeat Simple_repeat 585 chrUn_NT_465910v1 3912 4280 (CAAGG)n 522 + 3912 4280 0 2 176,180, 0,188, +,+, 631773 Simple_repeat Simple_repeat 585 chrUn_NT_465910v1 4773 5317 (CCTTG)n 446 + 4773 5317 0 3 190,119,55, 0,201,489, +,+,+, 631777 Simple_repeat Simple_repeat 585 chrUn_NT_465910v1 7373 8750 GGXHOI 384 + 7373 8750 0 2 1044,270, 0,1107, +,+, 631782 Satellite W-chromosome 585 chrUn_NT_465910v1 11893 13783 GGXHOI 374 + 11893 13783 0 2 820,1008, 0,882, +,+, 631787 Satellite W-chromosome 585 chrUn_NT_465910v1 15110 16730 GGXHOI 390 + 15110 16730 0 2 1043,514, 0,1106, +,+, 631790 Satellite W-chromosome 585 chrUn_NT_465911v1 12737 13692 (CCTTG)n 578 + 12737 13692 0 3 134,46,288, 0,318,667, +,+,+, 631808 Simple_repeat Simple_repeat 585 chrUn_NT_465911v1 13751 14077 (CCTTG)n 502 + 13751 14077 0 2 78,69, 0,257, +,+, 631812 Simple_repeat Simple_repeat 585 chrUn_NT_465911v1 15940 16479 (GCCTG)n 470 + 15940 16479 0 2 144,198, 0,341, +,+, 631827 Simple_repeat Simple_repeat 585 chrUn_NT_465912v1 13803 14854 GGXHOI 392 + 13803 14854 0 2 472,516, 0,535, +,+, 631846 Satellite W-chromosome 585 chrUn_NT_465912v1 14953 16004 GGXHOI 392 + 14953 16004 0 2 472,516, 0,535, +,+, 631847 Satellite W-chromosome 585 chrUn_NT_465913v1 700 3116 GGLTR7-int 578 - 700 3116 0 2 762,338, 0,2078, -,-, 631851 LTR ERV1 585 chrUn_NT_465914v1 1363 3469 GGXHOI 346 + 1363 3469 0 3 948,589,519, 0,976,1587, +,+,+, 631865 Satellite W-chromosome 585 chrUn_NT_465914v1 3863 16798 GGXHOI 372 + 3863 16798 0 10 184,384,1296,153,2386,153,542,5746,596,1344, 0,205,601,1909,2079,4477,4647,5211,10979,11591, +,+,+,+,+,+,+,+,+,+, 631866 Satellite W-chromosome 585 chrUn_NT_465916v1 5639 7144 GGLTR7-int 605 - 5639 7144 0 3 113,119,758, 0,595,747, -,-,-, 631887 LTR ERV1 585 chrUn_NT_465917v1 4711 6107 GGLTR7-int 327 - 4711 6107 0 3 278,261,101, 0,1032,1295, -,-,-, 631911 LTR ERV1 585 chrUn_NT_465917v1 6839 9554 GGERVL-B-int 785 - 6839 9554 0 4 917,1062,53,313, 0,917,1979,2402, -,-,-,-, 631913 LTR ERVL 585 chrUn_NT_465917v1 12055 15317 GGLTR7A 813 - 12055 15317 0 2 589,2665, 0,597, -,-, 631917 LTR ERV1 585 chrUn_NT_465917v1 15315 16000 GGLTR7A 789 + 15315 16000 0 2 86,591, 0,94, +,+, 631918 LTR ERV1 585 chrUn_NT_465918v1 13515 14776 GGLTR7-int 608 + 13515 14776 0 2 337,464, 0,797, +,+, 631931 LTR ERV1 585 chrUn_NT_465918v1 14970 16798 GGLTR10D-int 922 - 14970 16798 0 2 358,1467, 0,361, -,-, 631933 LTR ERVK 585 chrUn_NT_465919v1 16142 16802 (CCTTG)n 514 + 16142 16802 0 3 150,39,278, 0,332,382, +,+,+, 631938 Simple_repeat Simple_repeat 585 chrUn_NT_465920v1 11757 12845 GGERVL-A-int 57 + 11757 12845 0 2 377,440, 0,648, +,+, 631953 LTR ERVL 585 chrUn_NT_465921v1 6634 10292 GGXHOI 387 - 6634 10292 0 3 2511,961,145, 0,2531,3513, -,-,-, 631959 Satellite W-chromosome 585 chrUn_NT_465921v1 10385 13106 GGXHOI 334 - 10385 13106 0 3 1353,921,408, 0,1373,2313, -,-,-, 631960 Satellite W-chromosome 585 chrUn_NT_465921v1 13339 14748 GGXHOI 393 - 13339 14748 0 2 333,1064, 0,345, -,-, 631961 Satellite W-chromosome 585 chrUn_NT_465923v1 12447 12955 GGLTR3F2 598 + 12447 12955 0 2 231,220, 0,288, +,+, 632045 LTR ERVL 585 chrUn_NT_465924v1 12968 14784 Z-REP 466 - 12968 14784 0 2 1236,288, 0,1528, -,-, 632060 Satellite macro 585 chrUn_NT_465925v1 957 1913 GGXHOI 334 + 957 1913 0 2 429,510, 0,446, +,+, 632065 Satellite W-chromosome 585 chrUn_NT_465925v1 6413 7464 GGXHOI 392 + 6413 7464 0 2 472,516, 0,535, +,+, 632073 Satellite W-chromosome 585 chrUn_NT_465925v1 7563 8614 GGXHOI 392 + 7563 8614 0 2 472,516, 0,535, +,+, 632074 Satellite W-chromosome 585 chrUn_NT_465925v1 11586 12539 GGXHOI 335 + 11586 12539 0 2 137,764, 0,189, +,+, 632078 Satellite W-chromosome 585 chrUn_NT_465926v1 4528 4778 CR1-X 510 + 4528 4778 0 2 172,78, 0,172, +,+, 632085 LINE CR1 585 chrUn_NT_465926v1 9164 10288 CR1-B2 706 + 9164 10288 0 2 224,897, 0,227, +,+, 632088 LINE CR1 585 chrUn_NT_465927v1 5278 5374 (TCCCACC)n 326 + 5278 5374 0 2 42,16, 0,80, +,+, 632100 Simple_repeat Simple_repeat 585 chrUn_NT_465928v1 3615 5009 GGLTR7-int 321 - 3615 5009 0 3 282,261,101, 0,1030,1293, -,-,-, 632111 LTR ERV1 585 chrUn_NT_465928v1 5744 8556 GGERVL-B-int 688 - 5744 8556 0 2 918,1894, 0,918, -,-, 632113 LTR ERVL 585 chrUn_NT_465928v1 11094 11664 (CAGGC)n 502 + 11094 11664 0 2 322,120, 0,450, +,+, 632119 Simple_repeat Simple_repeat 585 chrUn_NT_465928v1 11805 12261 (CAGGC)n 504 + 11805 12261 0 2 248,208, 0,248, +,+, 632123 Simple_repeat Simple_repeat 585 chrUn_NT_465928v1 13293 14023 (CAAGG)n 616 + 13293 14023 0 2 337,211, 0,519, +,+, 632132 Simple_repeat Simple_repeat 585 chrUn_NT_465928v1 14024 14909 CR1-F0 886 + 14024 14909 0 2 747,138, 0,747, +,+, 632134 LINE CR1 585 chrUn_NT_465929v1 534 2993 GGLTR7-int 597 + 534 2993 0 2 339,793, 0,1666, +,+, 632137 LTR ERV1 585 chrUn_NT_465929v1 3005 5429 GGERV10_LTR 848 - 3005 5429 0 2 38,41, 0,2383, -,-, 632140 LTR ERVL 585 chrUn_NT_465929v1 3172 5387 GGLTR10D-int 923 - 3172 5387 0 2 364,1848, 0,367, -,-, 632141 LTR ERVK 585 chrUn_NT_465929v1 6037 7023 (CGAGG)n 541 + 6037 7023 0 3 358,367,200, 0,419,786, +,+,+, 632144 Simple_repeat Simple_repeat 585 chrUn_NT_465929v1 7246 7959 (CGAGG)n 537 + 7246 7959 0 3 199,46,277, 0,377,436, +,+,+, 632146 Simple_repeat Simple_repeat 585 chrUn_NT_465929v1 8060 8854 (CGAGG)n 527 + 8060 8854 0 3 183,399,176, 0,201,618, +,+,+, 632148 Simple_repeat Simple_repeat 585 chrUn_NT_465929v1 9232 9942 (CGAGG)n 521 + 9232 9942 0 3 119,15,397, 0,298,313, +,+,+, 632150 Simple_repeat Simple_repeat 585 chrUn_NT_465929v1 10965 13757 (CGAGG)n 535 + 10965 13757 0 6 214,54,1019,74,179,808, 0,393,467,1669,1781,1984, +,+,+,+,+,+, 632156 Simple_repeat Simple_repeat 585 chrUn_NT_465929v1 14661 15855 (CGAGG)n 531 + 14661 15855 0 3 380,263,358, 0,558,836, +,+,+, 632161 Simple_repeat Simple_repeat 585 chrUn_NT_465929v1 15983 16484 (CGAGG)n 528 + 15983 16484 0 2 283,37, 0,464, +,+, 632164 Simple_repeat Simple_repeat 585 chrUn_NT_465930v1 2246 3005 (CAGGC)n 426 + 2246 3005 0 3 176,74,298, 0,352,461, +,+,+, 632172 Simple_repeat Simple_repeat 585 chrUn_NT_465930v1 2933 3627 (CAAGG)n 506 + 2933 3627 0 2 201,311, 0,383, +,+, 632174 Simple_repeat Simple_repeat 585 chrUn_NT_465930v1 5454 5798 (TTTCT)n 326 + 5454 5798 0 2 38,10, 0,334, +,+, 632179 Simple_repeat Simple_repeat 585 chrUn_NT_465930v1 15282 16703 GGLTR7-int 288 - 15282 16703 0 3 291,194,99, 0,1102,1322, -,-,-, 632189 LTR ERV1 585 chrUn_NT_465931v1 3864 6968 GGLTR7-int 416 - 3864 6968 0 4 277,949,1642,116, 0,324,1346,2988, -,-,-,-, 632195 LTR ERV1 585 chrUn_NT_465931v1 15642 16754 GGLTR7-int 404 - 15642 16754 0 2 739,341, 0,771, -,-, 632204 LTR ERV1 585 chrUn_NT_465932v1 13761 14262 CR1-C2 505 - 13761 14262 0 2 84,417, 0,84, -,-, 632215 LINE CR1 585 chrUn_NT_465933v1 1271 3858 GGXHOI 412 - 1271 3858 0 4 1158,905,146,339, 0,1173,2091,2248, -,-,-,-, 632221 Satellite W-chromosome 585 chrUn_NT_465933v1 3943 5197 GGXHOI 382 - 3943 5197 0 3 434,303,476, 0,451,778, -,-,-, 632222 Satellite W-chromosome 585 chrUn_NT_465933v1 5412 6363 GGXHOI 411 - 5412 6363 0 3 445,146,336, 0,458,615, -,-,-, 632223 Satellite W-chromosome 585 chrUn_NT_465933v1 6448 8528 GGXHOI 421 - 6448 8528 0 3 488,146,1423, 0,500,657, -,-,-, 632224 Satellite W-chromosome 585 chrUn_NT_465933v1 9048 10043 GGXHOI 393 - 9048 10043 0 2 562,413, 0,582, -,-, 632228 Satellite W-chromosome 585 chrUn_NT_465933v1 10128 11116 GGXHOI 381 - 10128 11116 0 2 685,288, 0,700, -,-, 632229 Satellite W-chromosome 585 chrUn_NT_465933v1 11200 12188 GGXHOI 382 - 11200 12188 0 2 559,409, 0,579, -,-, 632230 Satellite W-chromosome 585 chrUn_NT_465933v1 13551 16751 GGXHOI 416 - 13551 16751 0 4 145,148,2423,429, 0,164,327,2771, -,-,-,-, 632233 Satellite W-chromosome 585 chrUn_NT_465934v1 5304 6428 CR1-B2 706 + 5304 6428 0 2 225,896, 0,228, +,+, 632239 LINE CR1 585 chrUn_NT_465935v1 942 2191 GGXHOI 370 - 942 2191 0 2 739,489, 0,760, -,-, 632252 Satellite W-chromosome 585 chrUn_NT_465935v1 2226 2921 GGXHOI 402 - 2226 2921 0 2 417,263, 0,432, -,-, 632254 Satellite W-chromosome 585 chrUn_NT_465935v1 3227 3933 GGXHOI 413 - 3227 3933 0 2 191,494, 0,212, -,-, 632256 Satellite W-chromosome 585 chrUn_NT_465935v1 5965 7061 GGXHOI 415 - 5965 7061 0 2 686,392, 0,704, -,-, 632261 Satellite W-chromosome 585 chrUn_NT_465935v1 7969 9938 GGXHOI 401 - 7969 9938 0 3 692,741,496, 0,711,1473, -,-,-, 632265 Satellite W-chromosome 585 chrUn_NT_465935v1 9972 11072 GGXHOI 408 - 9972 11072 0 2 694,387, 0,713, -,-, 632267 Satellite W-chromosome 585 chrUn_NT_465935v1 11148 11949 GGXHOI 376 - 11148 11949 0 2 274,506, 0,295, -,-, 632269 Satellite W-chromosome 585 chrUn_NT_465935v1 12505 13971 GGXHOI 351 - 12505 13971 0 2 943,498, 0,968, -,-, 632272 Satellite W-chromosome 585 chrUn_NT_465935v1 14049 14354 GGXHOI 353 - 14049 14354 0 2 128,152, 0,153, -,-, 632274 Satellite W-chromosome 585 chrUn_NT_465938v1 3750 4129 CR1-X 555 - 3750 4129 0 2 178,201, 0,178, -,-, 632322 LINE CR1 585 chrUn_NT_465938v1 7134 7513 CR1-X 555 - 7134 7513 0 2 178,201, 0,178, -,-, 632326 LINE CR1 585 chrUn_NT_465938v1 10520 10899 CR1-X 555 - 10520 10899 0 2 178,201, 0,178, -,-, 632330 LINE CR1 585 chrUn_NT_465938v1 13903 14279 CR1-X 557 - 13903 14279 0 2 175,201, 0,175, -,-, 632335 LINE CR1 585 chrUn_NT_465939v1 2760 4955 GGXHOI 381 + 2760 4955 0 3 472,1083,514, 0,535,1681, +,+,+, 632343 Satellite W-chromosome 585 chrUn_NT_465939v1 7340 9037 GGXHOI 369 + 7340 9037 0 2 393,1246, 0,451, +,+, 632347 Satellite W-chromosome 585 chrUn_NT_465939v1 9221 10180 GGXHOI 386 + 9221 10180 0 2 383,513, 0,446, +,+, 632348 Satellite W-chromosome 585 chrUn_NT_465939v1 10852 13609 GGXHOI 380 + 10852 13609 0 3 1042,1081,509, 0,1105,2248, +,+,+, 632350 Satellite W-chromosome 585 chrUn_NT_465939v1 13793 15242 GGXHOI 360 + 13793 15242 0 2 381,1005, 0,444, +,+, 632351 Satellite W-chromosome 585 chrUn_NT_465940v1 3730 6943 GGXHOI 370 - 3730 6943 0 2 2437,759, 0,2454, -,-, 632357 Satellite W-chromosome 585 chrUn_NT_465940v1 7034 12825 GGERV10_LTR 943 - 7034 12825 0 3 224,5352,214, 0,224,5577, -,-,-, 632358 LTR ERVL 585 chrUn_NT_465940v1 14627 16728 GGERV10_LTR 940 - 14627 16728 0 2 220,1881, 0,220, -,-, 632360 LTR ERVL 585 chrUn_NT_465941v1 1881 4224 GGXHOI 340 - 1881 4224 0 3 673,1201,387, 0,693,1956, -,-,-, 632363 Satellite W-chromosome 585 chrUn_NT_465941v1 4403 5774 GGXHOI 330 - 4403 5774 0 3 432,386,433, 0,494,938, -,-,-, 632364 Satellite W-chromosome 585 chrUn_NT_465941v1 5872 7124 GGXHOI 363 - 5872 7124 0 2 883,310, 0,942, -,-, 632365 Satellite W-chromosome 585 chrUn_NT_465941v1 7227 9793 GGXHOI 347 - 7227 9793 0 4 919,590,432,484, 0,940,1588,2082, -,-,-,-, 632366 Satellite W-chromosome 585 chrUn_NT_465941v1 9875 13861 GGXHOI 337 - 9875 13861 0 6 433,875,924,319,599,549, 0,495,1431,2415,2782,3437, -,-,-,-,-,-, 632367 Satellite W-chromosome 585 chrUn_NT_465942v1 1347 1776 (CAAGG)n 592 + 1347 1776 0 2 140,109, 0,320, +,+, 632378 Simple_repeat Simple_repeat 585 chrUn_NT_465942v1 1796 2684 CR1-F0 896 + 1796 2684 0 2 763,125, 0,763, +,+, 632380 LINE CR1 585 chrUn_NT_465942v1 12778 14163 GGLTR7-int 311 - 12778 14163 0 3 280,231,99, 0,1031,1286, -,-,-, 632390 LTR ERV1 585 chrUn_NT_465942v1 14891 16716 GGERVL-B-int 835 - 14891 16716 0 2 915,910, 0,915, -,-, 632392 LTR ERVL 585 chrUn_NT_465944v1 3386 4624 GGXHOI 375 - 3386 4624 0 2 619,599, 0,639, -,-, 632405 Satellite W-chromosome 585 chrUn_NT_465944v1 6398 7752 GGXHOI 350 - 6398 7752 0 2 150,1174, 0,180, -,-, 632408 Satellite W-chromosome 585 chrUn_NT_465944v1 8845 11368 GGXHOI 356 - 8845 11368 0 5 730,452,142,541,542, 0,769,1262,1429,1981, -,-,-,-,-, 632410 Satellite W-chromosome 585 chrUn_NT_465944v1 12957 16714 GGXHOI 372 - 12957 16714 0 6 894,305,549,903,710,296, 0,915,1243,1811,2731,3461, -,-,-,-,-,-, 632413 Satellite W-chromosome 585 chrUn_NT_465945v1 8885 11337 GGLTR7-int 589 + 8885 11337 0 2 339,792, 0,1660, +,+, 632425 LTR ERV1 585 chrUn_NT_465945v1 11349 13778 GGERV10_LTR 824 - 11349 13778 0 2 38,42, 0,2387, -,-, 632428 LTR ERVL 585 chrUn_NT_465945v1 11518 13735 GGLTR10D-int 920 - 11518 13735 0 2 364,1850, 0,367, -,-, 632429 LTR ERVK 585 chrUn_NT_465945v1 15731 16287 (CGAGG)n 524 + 15731 16287 0 2 178,363, 0,193, +,+, 632438 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 78 637 (CCTTG)n 560 + 78 637 0 2 368,191, 0,368, +,+, 632441 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 3139 3758 (CAAGG)n 506 + 3139 3758 0 2 387,194, 0,425, +,+, 632455 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 7036 7569 (CAAGG)n 524 + 7036 7569 0 2 181,318, 0,215, +,+, 632472 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 7568 8377 (CCTTG)n 537 + 7568 8377 0 3 363,202,181, 0,364,628, +,+,+, 632473 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 9759 10274 (CCTTG)n 520 + 9759 10274 0 2 259,249, 0,266, +,+, 632480 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 10661 11337 (CAAGG)n 546 + 10661 11337 0 2 251,235, 0,441, +,+, 632483 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 11336 12146 (CCTTG)n 524 + 11336 12146 0 2 286,504, 0,306, +,+, 632485 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 13198 13698 (CCTTG)n 570 + 13198 13698 0 2 286,175, 0,325, +,+, 632491 Simple_repeat Simple_repeat 585 chrUn_NT_465946v1 14432 14991 (CAAGG)n 526 + 14432 14991 0 2 351,208, 0,351, +,+, 632497 Simple_repeat Simple_repeat 585 chrUn_NT_465948v1 5737 6861 CR1-B2 704 - 5737 6861 0 2 896,225, 0,899, -,-, 632517 LINE CR1 585 chrUn_NT_465948v1 12480 12789 CR1-X 517 - 12480 12789 0 3 50,78,171, 0,60,138, -,-,-, 632523 LINE CR1 585 chrUn_NT_465950v1 2042 3647 GGXHOI 554 - 2042 3647 0 2 1057,360, 0,1245, -,-, 632572 Satellite W-chromosome 585 chrUn_NT_465950v1 6916 10469 GGXHOI 519 - 6916 10469 0 3 373,1574,1522, 0,415,2031, -,-,-, 632576 Satellite W-chromosome 585 chrUn_NT_465950v1 12367 13394 GGXHOI 479 - 12367 13394 0 2 658,357, 0,670, -,-, 632579 Satellite W-chromosome 585 chrUn_NT_465950v1 13533 15036 GGXHOI 470 - 13533 15036 0 2 226,1246, 0,257, -,-, 632580 Satellite W-chromosome 585 chrUn_NT_465950v1 15613 16678 GGXHOI 543 - 15613 16678 0 2 201,843, 0,222, -,-, 632582 Satellite W-chromosome 585 chrUn_NT_465951v1 956 16686 GGXHOI 401 + 956 16686 0 16 839,961,978,938,1017,977,977,978,942,977,968,933,934,64,918,1965, 0,859,1840,2838,3793,4830,5827,6824,7822,8822,9819,10807,11757,12705,12789,13765, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 632584 Satellite W-chromosome 585 chrUn_NT_465952v1 978 8119 Z-REP 813 + 978 8119 0 2 1698,5391, 0,1750, +,+, 632586 Satellite macro 585 chrUn_NT_465952v1 14309 16691 GGLTR7-int 789 - 14309 16691 0 5 117,259,1548,323,110, 0,118,378,1949,2272, -,-,-,-,-, 632592 LTR ERV1 585 chrUn_NT_465953v1 6104 9220 Sat-CR1_GG 166 + 6104 9220 0 2 323,1922, 0,1194, +,+, 632600 Satellite Satellite 585 chrUn_NT_465953v1 11551 13155 GGXHOI 536 + 11551 13155 0 3 870,143,54, 0,926,1550, +,+,+, 632606 Satellite W-chromosome 585 chrUn_NT_465953v1 13347 15039 GGXHOI 420 + 13347 15039 0 3 42,754,166, 0,754,1526, +,+,+, 632608 Satellite W-chromosome 585 chrUn_NT_465953v1 15135 16590 GGXHOI 495 + 15135 16590 0 4 296,514,60,294, 0,344,913,1161, +,+,+,+, 632610 Satellite W-chromosome 585 chrUn_NT_465954v1 1585 8034 GGXHOI 578 - 1585 8034 0 4 1036,328,123,1529, 0,1665,2618,4920, -,-,-,-, 632616 Satellite W-chromosome 585 chrUn_NT_465954v1 6527 11978 Sat-CR1_GG 148 - 6527 11978 0 2 1562,1295, 0,4156, -,-, 632620 Satellite Satellite 585 chrUn_NT_465954v1 14451 16680 GGXHOI 570 - 14451 16680 0 2 1785,212, 0,2017, -,-, 632624 Satellite W-chromosome 585 chrUn_NT_465955v1 573 2066 (CGAGG)n 561 + 573 2066 0 4 364,365,315,114, 0,395,767,1379, +,+,+,+, 632627 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 2434 2750 (CAAGG)n 442 + 2434 2750 0 2 91,45, 0,271, +,+, 632632 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 2770 3720 (CGAGG)n 536 + 2770 3720 0 2 166,605, 0,345, +,+, 632634 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 3771 4619 (CGAGG)n 591 + 3771 4619 0 3 180,170,374, 0,180,474, +,+,+, 632637 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 4625 4951 (CAAGG)n 454 + 4625 4951 0 2 115,25, 0,301, +,+, 632639 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 6452 7331 (CGAGG)n 562 + 6452 7331 0 4 123,89,37,95, 0,301,567,784, +,+,+,+, 632647 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 7406 7906 (CGAGG)n 565 + 7406 7906 0 2 185,290, 0,210, +,+, 632652 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 9112 9812 (CGAGG)n 574 + 9112 9812 0 2 438,20, 0,680, +,+, 632658 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 9957 11501 (CGAGG)n 593 + 9957 11501 0 2 1115,415, 0,1129, +,+, 632660 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 11561 13630 (CGAGG)n 555 + 11561 13630 0 7 352,381,441,186,141,76,15, 0,367,788,1268,1479,1799,2054, +,+,+,+,+,+,+, 632662 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 13925 15041 (CGAGG)n 538 + 13925 15041 0 2 440,493, 0,623, +,+, 632668 Simple_repeat Simple_repeat 585 chrUn_NT_465955v1 15987 16612 (CGAGG)n 481 + 15987 16612 0 2 191,378, 0,247, +,+, 632673 Simple_repeat Simple_repeat 585 chrUn_NT_465956v1 444 3637 GGXHOI 370 + 444 3637 0 3 669,393,2054, 0,696,1139, +,+,+, 632677 Satellite W-chromosome 585 chrUn_NT_465956v1 3705 5617 GGXHOI 335 + 3705 5617 0 3 135,140,1560, 0,165,352, +,+,+, 632678 Satellite W-chromosome 585 chrUn_NT_465956v1 6180 6850 GGXHOI 287 + 6180 6850 0 2 307,335, 0,335, +,+, 632680 Satellite W-chromosome 585 chrUn_NT_465956v1 6997 16572 GGXHOI 397 + 6997 16572 0 7 702,689,840,774,5396,833,148, 0,727,1432,2330,3120,8532,9427, +,+,+,+,+,+,+, 632681 Satellite W-chromosome 585 chrUn_NT_465959v1 2687 2842 G-rich 523 + 2687 2842 0 2 38,69, 0,86, +,+, 632704 Low_complexity Low_complexity 585 chrUn_NT_465959v1 3824 3887 (GTGTGG)n 526 + 3824 3887 0 2 8,13, 0,50, +,+, 632706 Simple_repeat Simple_repeat 585 chrUn_NT_465959v1 8563 15789 Z-REP 803 + 8563 15789 0 3 2059,3014,2113, 0,2086,5113, +,+,+, 632713 Satellite macro 585 chrUn_NT_465960v1 3631 4902 CR1-H 721 + 3631 4902 0 3 720,425,111, 0,735,1160, +,+,+, 632720 LINE CR1 585 chrUn_NT_465960v1 7657 8280 CR1-H 675 + 7657 8280 0 2 479,138, 0,485, +,+, 632724 LINE CR1 585 chrUn_NT_465961v1 3385 10308 GGXHOI 396 - 3385 10308 0 4 1693,1727,1717,1695, 0,1750,3494,5228, -,-,-,-, 632732 Satellite W-chromosome 585 chrUn_NT_465961v1 10525 13838 GGXHOI 386 - 10525 13838 0 2 1566,1730, 0,1583, -,-, 632733 Satellite W-chromosome 585 chrUn_NT_465961v1 15166 15949 GGXHOI 367 - 15166 15949 0 2 349,414, 0,369, -,-, 632735 Satellite W-chromosome 585 chrUn_NT_465962v1 2135 3041 GGXHOI 380 - 2135 3041 0 2 472,408, 0,498, -,-, 632739 Satellite W-chromosome 585 chrUn_NT_465962v1 6657 8159 GGXHOI 379 - 6657 8159 0 2 967,472, 0,1030, -,-, 632744 Satellite W-chromosome 585 chrUn_NT_465962v1 8258 9107 GGXHOI 366 - 8258 9107 0 2 516,270, 0,579, -,-, 632745 Satellite W-chromosome 585 chrUn_NT_465962v1 9477 12123 GGXHOI 379 - 9477 12123 0 3 963,1085,472, 0,1026,2174, -,-,-, 632746 Satellite W-chromosome 585 chrUn_NT_465962v1 12877 14421 GGXHOI 372 - 12877 14421 0 2 1009,472, 0,1072, -,-, 632748 Satellite W-chromosome 585 chrUn_NT_465962v1 15173 16656 GGXHOI 366 - 15173 16656 0 2 1005,417, 0,1066, -,-, 632750 Satellite W-chromosome 585 chrUn_NT_465964v1 6245 6388 GA-rich 294 + 6245 6388 0 2 43,45, 0,98, +,+, 632791 Low_complexity Low_complexity 585 chrUn_NT_465964v1 9366 9510 GA-rich 320 + 9366 9510 0 2 43,67, 0,77, +,+, 632797 Low_complexity Low_complexity 585 chrUn_NT_465964v1 14702 14935 G-rich 258 + 14702 14935 0 2 30,42, 0,191, +,+, 632808 Low_complexity Low_complexity 585 chrUn_NT_465965v1 2906 3370 (CCTTG)n 629 + 2906 3370 0 2 64,388, 0,76, +,+, 632820 Simple_repeat Simple_repeat 585 chrUn_NT_465965v1 3401 3985 (CCTTG)n 583 + 3401 3985 0 2 213,366, 0,218, +,+, 632822 Simple_repeat Simple_repeat 585 chrUn_NT_465965v1 6234 7364 CR1-F2 879 + 6234 7364 0 2 658,472, 0,658, +,+, 632831 LINE CR1 585 chrUn_NT_465966v1 744 2805 GGXHOI 354 + 744 2805 0 4 370,1080,294,250, 0,390,1495,1811, +,+,+,+, 632846 Satellite W-chromosome 585 chrUn_NT_465966v1 5604 16076 GGXHOI 417 + 5604 16076 0 13 1230,97,984,64,677,332,1591,1035,1053,1126,64,1060,887, 0,1243,1363,2404,2488,3205,3552,5162,6217,7285,8426,8510,9585, +,+,+,+,+,+,+,+,+,+,+,+,+, 632850 Satellite W-chromosome 585 chrUn_NT_465967v1 645 1282 (CAGGC)n 498 + 645 1282 0 2 311,165, 0,472, +,+, 632853 Simple_repeat Simple_repeat 585 chrUn_NT_465967v1 1695 2367 (CAGGC)n 556 + 1695 2367 0 3 174,248,236, 0,188,436, +,+,+, 632859 Simple_repeat Simple_repeat 585 chrUn_NT_465967v1 3756 4146 (CAAGG)n 552 + 3756 4146 0 2 174,216, 0,174, +,+, 632870 Simple_repeat Simple_repeat 585 chrUn_NT_465967v1 4213 4920 (CAAGG)n 536 + 4213 4920 0 2 362,327, 0,380, +,+, 632872 Simple_repeat Simple_repeat 585 chrUn_NT_465969v1 1517 2330 GGXHOI 512 + 1517 2330 0 2 282,280, 0,533, +,+, 632891 Satellite W-chromosome 585 chrUn_NT_465969v1 2729 3818 GGXHOI 546 + 2729 3818 0 3 164,168,180, 0,374,909, +,+,+, 632894 Satellite W-chromosome 585 chrUn_NT_465969v1 3890 7627 GGXHOI 578 + 3890 7627 0 7 803,816,125,479,145,125,19, 0,1117,1981,2419,3089,3279,3718, +,+,+,+,+,+,+, 632897 Satellite W-chromosome 585 chrUn_NT_465969v1 7704 10229 GGXHOI 582 + 7704 10229 0 4 275,367,987,19, 0,524,1205,2506, +,+,+,+, 632902 Satellite W-chromosome 585 chrUn_NT_465969v1 10307 11445 GGXHOI 580 + 10307 11445 0 4 190,26,118,19, 0,612,678,1119, +,+,+,+, 632906 Satellite W-chromosome 585 chrUn_NT_465969v1 11522 12745 GGXHOI 590 + 11522 12745 0 4 275,195,125,19, 0,524,765,1204, +,+,+,+, 632909 Satellite W-chromosome 585 chrUn_NT_465969v1 12821 13955 GGXHOI 598 + 12821 13955 0 3 189,221,18, 0,611,1116, +,+,+, 632912 Satellite W-chromosome 585 chrUn_NT_465969v1 14025 14742 GGXHOI 596 + 14025 14742 0 2 276,144, 0,573, +,+, 632915 Satellite W-chromosome 585 chrUn_NT_465969v1 14687 15225 Sat-CR1_GG 176 + 14687 15225 0 2 102,22, 0,516, +,+, 632917 Satellite Satellite 585 chrUn_NT_465969v1 15322 16541 GGXHOI 562 + 15322 16541 0 3 278,428,20, 0,487,1199, +,+,+, 632919 Satellite W-chromosome 585 chrUn_NT_465970v1 9425 10358 (CATCC)n 684 + 9425 10358 0 3 565,147,184, 0,583,749, +,+,+, 632939 Simple_repeat Simple_repeat 585 chrUn_NT_465970v1 14292 14389 (C)n 768 + 14292 14389 0 2 18,46, 0,51, +,+, 632952 Simple_repeat Simple_repeat 585 chrUn_NT_465970v1 14437 14586 G-rich 566 + 14437 14586 0 2 48,43, 0,106, +,+, 632953 Low_complexity Low_complexity 585 chrUn_NT_465970v1 15816 15888 (CCCATC)n 340 + 15816 15888 0 2 25,16, 0,56, +,+, 632956 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 170 783 (CCTTG)n 515 + 170 783 0 2 214,367, 0,246, +,+, 632963 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 1522 1984 (CAAGG)n 553 + 1522 1984 0 3 46,157,106, 0,46,356, +,+,+, 632969 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 2096 3029 (CCTTG)n 485 + 2096 3029 0 4 159,34,289,183, 0,337,398,750, +,+,+,+, 632972 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 3074 3400 (CAGGC)n 329 + 3074 3400 0 2 225,40, 0,286, +,+, 632974 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 3985 4609 (CCTTG)n 525 + 3985 4609 0 3 144,54,189, 0,323,435, +,+,+, 632979 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 5257 5675 (CAAGG)n 539 + 5257 5675 0 3 46,75,198, 0,145,220, +,+,+, 632984 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 5841 6469 (CCTTG)n 501 + 5841 6469 0 3 184,333,87, 0,184,541, +,+,+, 632987 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 7905 8152 (CAAGG)n 468 + 7905 8152 0 2 24,178, 0,69, +,+, 632996 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 8279 9151 (CCTTG)n 503 + 8279 9151 0 3 234,411,181, 0,280,691, +,+,+, 632998 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 9603 10508 (CAAGG)n 504 + 9603 10508 0 2 198,529, 0,376, +,+, 633001 Simple_repeat Simple_repeat 585 chrUn_NT_465971v1 11631 12575 GGXHOI 343 - 11631 12575 0 2 202,725, 0,219, -,-, 633012 Satellite W-chromosome 585 chrUn_NT_465971v1 12656 13115 GGXHOI 328 - 12656 13115 0 2 142,291, 0,168, -,-, 633013 Satellite W-chromosome 585 chrUn_NT_465971v1 13788 15432 GGXHOI 356 - 13788 15432 0 2 510,1074, 0,570, -,-, 633015 Satellite W-chromosome 585 chrUn_NT_465972v1 3089 4463 CR1-H 654 + 3089 4463 0 2 1259,115, 0,1259, +,+, 633021 LINE CR1 585 chrUn_NT_465972v1 6472 7094 CR1-H 661 + 6472 7094 0 2 477,139, 0,483, +,+, 633024 LINE CR1 585 chrUn_NT_465972v1 15907 16620 GGERVK1-int 868 + 15907 16620 0 2 344,369, 0,344, +,+, 633032 LTR ERVK 585 chrUn_NT_465973v1 10950 12172 CR1-X 465 - 10950 12172 0 4 57,78,171,97, 0,60,138,1125, -,-,-,-, 633044 LINE CR1 585 chrUn_NT_465975v1 3394 15825 GGXHOI 403 - 3394 15825 0 7 2586,3619,3700,727,665,232,772, 0,2606,6282,9996,10735,11413,11659, -,-,-,-,-,-,-, 633062 Satellite W-chromosome 585 chrUn_NT_465976v1 803 5375 ENS1-int 891 + 803 5375 0 4 929,768,1949,924, 0,929,1699,3648, +,+,+,+, 633065 LTR ERVL 585 chrUn_NT_465976v1 5379 5738 GGXHOI 313 - 5379 5738 0 2 149,167, 0,192, -,-, 633066 Satellite W-chromosome 585 chrUn_NT_465976v1 5847 7196 GGXHOI 384 - 5847 7196 0 2 1114,194, 0,1155, -,-, 633067 Satellite W-chromosome 585 chrUn_NT_465976v1 8097 13693 GGXHOI 322 - 8097 13693 0 14 398,364,907,980,138,304,431,165,248,150,524,422,161,123, 0,446,827,1749,2744,2894,3233,3679,3855,4118,4322,4858,5291,5473, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 633070 Satellite W-chromosome 585 chrUn_NT_465976v1 13839 14335 GGXHOI 355 - 13839 14335 0 2 214,245, 0,251, -,-, 633071 Satellite W-chromosome 585 chrUn_NT_465976v1 14409 15869 GGXHOI 273 - 14409 15869 0 2 839,602, 0,858, -,-, 633072 Satellite W-chromosome 585 chrUn_NT_465977v1 1521 15732 GGXHOI 410 - 1521 15732 0 14 113,1108,1105,1137,1107,1106,1137,1136,1107,1104,1106,1180,1083,146, 0,168,1302,2463,3626,4789,5951,7114,8276,9439,10599,11761,12956,14065, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 633075 Satellite W-chromosome 585 chrUn_NT_465977v1 15833 16547 GGXHOI 397 - 15833 16547 0 2 554,147, 0,567, -,-, 633076 Satellite W-chromosome 585 chrUn_NT_465978v1 123 5894 GGLTR7-int 641 - 123 5894 0 3 561,642,4563, 0,566,1208, -,-,-, 633078 LTR ERV1 585 chrUn_NT_465978v1 6241 7286 (CAAGG)n 482 + 6241 7286 0 3 238,266,147, 0,460,898, +,+,+, 633082 Simple_repeat Simple_repeat 585 chrUn_NT_465978v1 7381 8280 (CAAGG)n 577 + 7381 8280 0 4 206,94,180,240, 0,385,479,659, +,+,+,+, 633086 Simple_repeat Simple_repeat 585 chrUn_NT_465978v1 8182 8737 (CAGGC)n 534 + 8182 8737 0 2 125,222, 0,333, +,+, 633088 Simple_repeat Simple_repeat 585 chrUn_NT_465979v1 16164 16480 (CAAGG)n 567 + 16164 16480 0 2 82,234, 0,82, +,+, 633108 Simple_repeat Simple_repeat 585 chrUn_NT_465980v1 2478 3255 Sat-CR1_GG 252 + 2478 3255 0 2 433,11, 0,766, +,+, 633114 Satellite Satellite 585 chrUn_NT_465980v1 8863 10289 Sat-CR1_GG 181 + 8863 10289 0 2 664,704, 0,722, +,+, 633125 Satellite Satellite 585 chrUn_NT_465980v1 11632 14247 Sat-CR1_GG 221 + 11632 14247 0 3 653,915,696, 0,991,1919, +,+,+, 633128 Satellite Satellite 585 chrUn_NT_465980v1 15583 16182 Sat-CR1_GG 204 + 15583 16182 0 2 180,261, 0,338, +,+, 633131 Satellite Satellite 585 chrUn_NT_465981v1 340 714 (CAAGG)n 634 + 340 714 0 2 125,63, 0,311, +,+, 633136 Simple_repeat Simple_repeat 585 chrUn_NT_465981v1 1001 9962 GGXHOI 383 - 1001 9962 0 6 531,434,923,4410,263,2312, 0,542,994,1938,6369,6649, -,-,-,-,-,-, 633139 Satellite W-chromosome 585 chrUn_NT_465981v1 10100 12824 GGXHOI 378 - 10100 12824 0 2 1087,1619, 0,1105, -,-, 633140 Satellite W-chromosome 585 chrUn_NT_465981v1 14076 16555 GGXHOI 373 - 14076 16555 0 5 362,812,319,345,545, 0,380,1209,1577,1934, -,-,-,-,-, 633142 Satellite W-chromosome 585 chrUn_NT_465982v1 8242 11348 GGLTR7-int 418 - 8242 11348 0 4 277,949,1622,116, 0,324,1368,2990, -,-,-,-, 633146 LTR ERV1 585 chrUn_NT_465983v1 4652 8403 GGXHOI 399 - 4652 8403 0 4 224,1873,196,1391, 0,236,2150,2360, -,-,-,-, 633154 Satellite W-chromosome 585 chrUn_NT_465983v1 12617 15172 GGXHOI 413 - 12617 15172 0 2 2067,462, 0,2093, -,-, 633157 Satellite W-chromosome 585 chrUn_NT_465984v1 1850 2474 CR1-H 378 + 1850 2474 0 2 209,379, 0,245, +,+, 633161 LINE CR1 585 chrUn_NT_465984v1 4355 4979 CR1-H 378 + 4355 4979 0 2 209,379, 0,245, +,+, 633164 LINE CR1 585 chrUn_NT_465984v1 6858 7481 CR1-H 377 + 6858 7481 0 2 209,378, 0,245, +,+, 633167 LINE CR1 585 chrUn_NT_465984v1 9359 9979 CR1-H 374 + 9359 9979 0 2 207,377, 0,243, +,+, 633170 LINE CR1 585 chrUn_NT_465984v1 11837 12375 CR1-H 466 + 11837 12375 0 2 210,291, 0,247, +,+, 633173 LINE CR1 585 chrUn_NT_465984v1 14076 14968 CR1-C2 472 - 14076 14968 0 2 133,177, 0,715, -,-, 633174 LINE CR1 585 chrUn_NT_465984v1 14228 14813 CR1-H 485 + 14228 14813 0 2 93,359, 0,226, +,+, 633175 LINE CR1 585 chrUn_NT_465985v1 1618 4825 GGXHOI 568 - 1618 4825 0 2 401,236, 0,2971, -,-, 633181 Satellite W-chromosome 585 chrUn_NT_465985v1 7013 15203 GGXHOI 565 - 7013 15203 0 7 112,122,63,293,254,86,209, 0,2513,3128,4059,6879,7146,7981, -,-,-,-,-,-,-, 633184 Satellite W-chromosome 585 chrUn_NT_465986v1 1828 1967 (CCCTT)n 384 + 1828 1967 0 2 49,8, 0,131, +,+, 633197 Simple_repeat Simple_repeat 585 chrUn_NT_465987v1 681 1071 (CTGTG)n 418 + 681 1071 0 2 182,34, 0,356, +,+, 633234 Simple_repeat Simple_repeat 585 chrUn_NT_465990v1 1880 13246 GGXHOI 588 + 1880 13246 0 3 732,603,8033, 0,1050,3333, +,+,+, 633283 Satellite W-chromosome 585 chrUn_NT_465990v1 5373 14870 Sat-CR1_GG 160 + 5373 14870 0 2 7916,1039, 0,8458, +,+, 633285 Satellite Satellite 585 chrUn_NT_465990v1 13874 16544 GGXHOI 506 + 13874 16544 0 2 1018,720, 0,1950, +,+, 633287 Satellite W-chromosome 585 chrUn_NT_465991v1 2129 3742 (CGAGG)n 578 + 2129 3742 0 6 225,250,293,229,379,184, 0,249,513,806,1035,1429, +,+,+,+,+,+, 633299 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 3657 4016 (CAAGG)n 372 + 3657 4016 0 2 103,115, 0,244, +,+, 633300 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 3947 5089 (CGAGG)n 561 + 3947 5089 0 2 753,358, 0,784, +,+, 633302 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 5119 5705 (CGAGG)n 650 + 5119 5705 0 2 181,397, 0,189, +,+, 633304 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 5789 7399 (CGAGG)n 578 + 5789 7399 0 6 225,152,42,250,217,184, 0,249,583,759,1194,1426, +,+,+,+,+,+, 633306 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 7420 7925 (CAAGG)n 398 + 7420 7925 0 2 225,104, 0,401, +,+, 633310 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 7865 9667 (CGAGG)n 561 + 7865 9667 0 3 490,364,905, 0,510,897, +,+,+, 633312 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 9777 10818 (CGAGG)n 617 + 9777 10818 0 5 359,180,189,34,188, 0,376,572,772,853, +,+,+,+,+, 633314 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 10864 11776 (CGAGG)n 554 + 10864 11776 0 3 180,184,528, 0,200,384, +,+,+, 633316 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 11852 12266 (CGAGG)n 618 + 11852 12266 0 2 178,180, 0,234, +,+, 633318 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 12321 13146 (CGAGG)n 550 + 12321 13146 0 3 184,294,253, 0,243,572, +,+,+, 633320 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 13221 14573 (CGAGG)n 562 + 13221 14573 0 4 270,259,214,97, 0,602,861,1255, +,+,+,+, 633321 Simple_repeat Simple_repeat 585 chrUn_NT_465991v1 14638 16192 (CGAGG)n 568 + 14638 16192 0 5 469,225,183,367,115, 0,469,715,898,1439, +,+,+,+,+, 633326 Simple_repeat Simple_repeat 585 chrUn_NT_465992v1 6695 16496 GGXHOI 408 - 6695 16496 0 5 739,574,4092,1848,2431, 0,786,1396,5507,7370, -,-,-,-,-, 633329 Satellite W-chromosome 585 chrUn_NT_465993v1 14606 14684 (C)n 859 + 14606 14684 0 2 23,22, 0,56, +,+, 633337 Simple_repeat Simple_repeat 585 chrUn_NT_465994v1 2627 5606 GGXHOI 378 - 2627 5606 0 4 143,965,1230,563, 0,154,1166,2416, -,-,-,-, 633341 Satellite W-chromosome 585 chrUn_NT_465994v1 5791 6576 GGXHOI 372 - 5791 6576 0 2 173,595, 0,190, -,-, 633342 Satellite W-chromosome 585 chrUn_NT_465994v1 6671 15246 GGXHOI 380 - 6671 15246 0 6 144,1265,3010,647,1552,1873, 0,162,1450,4472,5135,6702, -,-,-,-,-,-, 633343 Satellite W-chromosome 585 chrUn_NT_465994v1 15355 16506 GGXHOI 348 - 15355 16506 0 2 153,982, 0,169, -,-, 633344 Satellite W-chromosome 585 chrUn_NT_465995v1 8111 8734 CR1-H 685 - 8111 8734 0 2 139,478, 0,145, -,-, 633355 LINE CR1 585 chrUn_NT_465995v1 12091 12548 CR1-H 677 - 12091 12548 0 2 163,294, 0,163, -,-, 633359 LINE CR1 585 chrUn_NT_465996v1 671 1000 (CAGGC)n 273 + 671 1000 0 2 226,85, 0,244, +,+, 633367 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 1044 1406 (CAAGG)n 482 + 1044 1406 0 2 172,177, 0,185, +,+, 633369 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 1462 2106 (CCTTG)n 475 + 1462 2106 0 2 306,323, 0,321, +,+, 633370 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 2804 3206 (CAAGG)n 486 + 2804 3206 0 2 181,195, 0,207, +,+, 633374 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 3417 4235 (CAAGG)n 425 + 3417 4235 0 3 75,404,294, 0,103,524, +,+,+, 633376 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 7012 7366 (GCCTG)n 370 + 7012 7366 0 2 127,41, 0,313, +,+, 633390 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 7709 8169 (CAAGG)n 517 + 7709 8169 0 2 227,233, 0,227, +,+, 633393 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 8375 9035 (CAAGG)n 435 + 8375 9035 0 3 80,188,199, 0,93,461, +,+,+, 633395 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 9523 10091 (CCTTG)n 509 + 9523 10091 0 2 181,359, 0,209, +,+, 633399 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 10821 12025 (CAAGG)n 480 + 10821 12025 0 4 485,198,130,25, 0,485,711,1179, +,+,+,+, 633405 Simple_repeat Simple_repeat 585 chrUn_NT_465996v1 12101 12860 (CCTTG)n 515 + 12101 12860 0 2 179,544, 0,215, +,+, 633409 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 560 921 (CCTCG)n 510 + 560 921 0 2 114,66, 0,295, +,+, 633447 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 1104 1471 (CCTCG)n 512 + 1104 1471 0 2 154,35, 0,332, +,+, 633450 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 2140 3883 (CCTCG)n 508 + 2140 3883 0 5 118,55,660,257,430, 0,297,361,1050,1313, +,+,+,+,+, 633455 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 4391 5919 (CCTCG)n 548 + 4391 5919 0 4 441,529,234,111, 0,463,1004,1417, +,+,+,+, 633461 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 5891 6461 (CCTTG)n 414 + 5891 6461 0 2 359,180, 0,390, +,+, 633463 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 8175 8809 (CCTCG)n 567 + 8175 8809 0 3 177,180,183, 0,227,451, +,+,+, 633470 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 10395 11609 (CCTCG)n 604 + 10395 11609 0 3 245,431,181, 0,591,1033, +,+,+, 633479 Simple_repeat Simple_repeat 585 chrUn_NT_465999v1 11875 15821 GGERV10_LTR 872 + 11875 15821 0 2 41,38, 0,3908, +,+, 633484 LTR ERVL 585 chrUn_NT_465999v1 11917 15654 GGLTR10D-int 865 + 11917 15654 0 4 375,382,2604,369, 0,377,761,3368, +,+,+,+, 633485 LTR ERVK 585 chrUn_NT_466001v1 11570 12964 GGLTR7-int 335 - 11570 12964 0 3 278,259,101, 0,1032,1293, -,-,-, 633509 LTR ERV1 585 chrUn_NT_466001v1 13704 16488 GGERVL-B-int 773 - 13704 16488 0 3 910,1248,313, 0,910,2471, -,-,-, 633511 LTR ERVL 585 chrUn_NT_466002v1 8789 10373 GGXHOI 359 - 8789 10373 0 3 662,263,584, 0,714,1000, -,-,-, 633521 Satellite W-chromosome 585 chrUn_NT_466002v1 13824 14934 GGXHOI 328 - 13824 14934 0 2 583,511, 0,599, -,-, 633526 Satellite W-chromosome 585 chrUn_NT_466002v1 16059 16501 GGXHOI 329 - 16059 16501 0 2 89,304, 0,138, -,-, 633528 Satellite W-chromosome 585 chrUn_NT_466003v1 1222 2396 (CCTCG)n 529 + 1222 2396 0 4 179,188,408,167, 0,234,422,1007, +,+,+,+, 633534 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 2446 5196 (CCTCG)n 552 + 2446 5196 0 8 177,178,560,143,25,452,368,494, 0,226,415,1020,1341,1391,1856,2256, +,+,+,+,+,+,+,+, 633537 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 5789 6170 (CCTCG)n 535 + 5789 6170 0 2 179,182, 0,199, +,+, 633541 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 6411 7180 (CCTCG)n 536 + 6411 7180 0 2 320,119, 0,650, +,+, 633542 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 8320 8841 (CCTCG)n 534 + 8320 8841 0 2 179,328, 0,193, +,+, 633550 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 8857 9478 (CCTCG)n 528 + 8857 9478 0 3 180,177,188, 0,195,433, +,+,+, 633552 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 9583 10269 (CCTCG)n 593 + 9583 10269 0 3 354,106,25, 0,374,661, +,+,+, 633554 Simple_repeat Simple_repeat 585 chrUn_NT_466003v1 10266 12682 GGERV10_LTR 848 + 10266 12682 0 2 41,38, 0,2378, +,+, 633556 LTR ERVL 585 chrUn_NT_466003v1 10308 12512 GGLTR10D-int 910 + 10308 12512 0 2 1837,364, 0,1840, +,+, 633557 LTR ERVK 585 chrUn_NT_466003v1 12694 15068 GGLTR7-int 616 - 12694 15068 0 2 795,253, 0,2121, -,-, 633558 LTR ERV1 585 chrUn_NT_466005v1 1254 6100 GGLTR7-int 739 + 1254 6100 0 7 68,171,267,333,1558,258,114, 0,2134,2305,2572,2914,4473,4732, +,+,+,+,+,+,+, 633612 LTR ERV1 585 chrUn_NT_466006v1 2827 4587 GGERVL-A-int 749 - 2827 4587 0 2 1302,458, 0,1302, -,-, 633625 LTR ERVL 585 chrUn_NT_466007v1 138 964 (CAAGG)n 652 + 138 964 0 2 583,243, 0,583, +,+, 633634 Simple_repeat Simple_repeat 585 chrUn_NT_466007v1 1913 3642 GGXHOI 379 + 1913 3642 0 3 1059,446,177, 0,1079,1552, +,+,+, 633641 Satellite W-chromosome 585 chrUn_NT_466007v1 4192 7483 CR1-F0 927 - 4192 7483 0 2 538,2753, 0,538, -,-, 633644 LINE CR1 585 chrUn_NT_466007v1 7840 9187 GGXHOI 391 + 7840 9187 0 3 289,316,661, 0,351,686, +,+,+, 633647 Satellite W-chromosome 585 chrUn_NT_466007v1 10459 14414 GGXHOI 399 - 10459 14414 0 5 439,598,1553,471,793, 0,451,1068,2676,3162, -,-,-,-,-, 633652 Satellite W-chromosome 585 chrUn_NT_466008v1 2025 7551 GGXHOI 418 - 2025 7551 0 2 2131,3381, 0,2145, -,-, 633655 Satellite W-chromosome 585 chrUn_NT_466008v1 7670 16488 GGXHOI 408 - 7670 16488 0 5 132,3082,3815,1561,146, 0,167,3267,7099,8672, -,-,-,-,-, 633656 Satellite W-chromosome 585 chrUn_NT_466009v1 2369 2766 (CAGTG)n 475 + 2369 2766 0 2 180,189, 0,208, +,+, 633659 Simple_repeat Simple_repeat 585 chrUn_NT_466009v1 4543 5042 (CAGTG)n 293 + 4543 5042 0 2 230,213, 0,286, +,+, 633666 Simple_repeat Simple_repeat 585 chrUn_NT_466009v1 9393 9652 (ACCCCATAGGG)n 325 - 9393 9652 0 2 132,112, 0,147, -,-, 633677 Satellite Satellite 585 chrUn_NT_466009v1 11507 12054 (CAGTG)n 546 + 11507 12054 0 2 140,47, 0,500, +,+, 633681 Simple_repeat Simple_repeat 585 chrUn_NT_466009v1 11647 12007 (CATCG)n 174 + 11647 12007 0 2 154,20, 0,340, +,+, 633682 Simple_repeat Simple_repeat 585 chrUn_NT_466009v1 12616 13762 (CATTG)n 540 + 12616 13762 0 4 165,24,105,75, 0,556,631,1071, +,+,+,+, 633687 Simple_repeat Simple_repeat 585 chrUn_NT_466009v1 13832 14416 (CATTG)n 556 + 13832 14416 0 2 138,107, 0,477, +,+, 633694 Simple_repeat Simple_repeat 585 chrUn_NT_466009v1 14891 15492 (CCCCATTGGG)n 515 + 14891 15492 0 3 342,109,112, 0,361,489, +,+,+, 633700 Satellite Satellite 585 chrUn_NT_466009v1 15586 15832 (CCCCATTGGG)n 607 + 15586 15832 0 2 108,109, 0,137, +,+, 633701 Satellite Satellite 585 chrUn_NT_466009v1 15898 16507 (CCCCATTGGG)n 471 + 15898 16507 0 3 109,232,203, 0,128,406, +,+,+, 633702 Satellite Satellite 585 chrUn_NT_466011v1 3978 4508 GGLTR3F1 930 - 3978 4508 0 2 494,36, 0,494, -,-, 633718 LTR ERVL 585 chrUn_NT_466011v1 14792 15296 GGLTR3F1 722 + 14792 15296 0 3 229,119,79, 0,278,425, +,+,+, 633725 LTR ERVL 585 chrUn_NT_466012v1 12494 13012 A-rich 511 + 12494 13012 0 2 444,39, 0,479, +,+, 633761 Low_complexity Low_complexity 585 chrUn_NT_466014v1 8876 10354 GGLTR7B 576 + 8876 10354 0 2 890,113, 0,1365, +,+, 633789 LTR ERV1 585 chrUn_NT_466014v1 12508 14931 CR1-C 810 + 12508 14931 0 3 396,1111,603, 0,709,1820, +,+,+, 633794 LINE CR1 585 chrUn_NT_466015v1 10256 11648 GGXHOI 556 - 10256 11648 0 2 1028,145, 0,1247, -,-, 633803 Satellite W-chromosome 585 chrUn_NT_466015v1 11788 14017 GGXHOI 541 - 11788 14017 0 3 821,404,913, 0,872,1316, -,-,-, 633805 Satellite W-chromosome 585 chrUn_NT_466015v1 14094 15551 GGXHOI 526 - 14094 15551 0 2 1040,375, 0,1082, -,-, 633806 Satellite W-chromosome 585 chrUn_NT_466016v1 13182 16389 GGXHOI 361 - 13182 16389 0 4 652,1027,1245,218, 0,685,1729,2989, -,-,-,-, 633809 Satellite W-chromosome 585 chrUn_NT_466017v1 371 1349 GGXHOI 419 - 371 1349 0 4 161,179,356,230, 0,178,372,748, -,-,-,-, 633811 Satellite W-chromosome 585 chrUn_NT_466017v1 1449 5632 GGXHOI 350 - 1449 5632 0 7 727,1138,497,680,427,403,189, 0,746,1911,2424,3119,3561,3994, -,-,-,-,-,-,-, 633812 Satellite W-chromosome 585 chrUn_NT_466017v1 5806 8926 GGXHOI 370 - 5806 8926 0 6 134,600,352,1045,263,597, 0,148,763,1134,2199,2523, -,-,-,-,-,-, 633813 Satellite W-chromosome 585 chrUn_NT_466017v1 9173 10393 GGXHOI 350 - 9173 10393 0 3 152,323,665, 0,212,555, -,-,-, 633814 Satellite W-chromosome 585 chrUn_NT_466017v1 11000 16458 GGXHOI 397 - 11000 16458 0 11 585,157,434,393,679,355,277,357,289,1056,596, 0,604,801,1254,1666,2360,2730,3065,3437,3787,4862, -,-,-,-,-,-,-,-,-,-,-, 633816 Satellite W-chromosome 585 chrUn_NT_466018v1 419 834 G-rich 494 + 419 834 0 2 31,327, 0,88, +,+, 633818 Low_complexity Low_complexity 585 chrUn_NT_466018v1 6494 7893 GGLTR7-int 269 - 6494 7893 0 3 287,290,102, 0,983,1297, -,-,-, 633825 LTR ERV1 585 chrUn_NT_466018v1 8622 11325 GGERVL-B-int 728 - 8622 11325 0 4 897,1062,57,312, 0,897,1960,2391, -,-,-,-, 633827 LTR ERVL 585 chrUn_NT_466018v1 13711 14393 GGLTR7A 752 - 13711 14393 0 2 583,91, 0,591, -,-, 633831 LTR ERV1 585 chrUn_NT_466020v1 1185 8444 GGXHOI 372 - 1185 8444 0 5 1058,2406,1494,1711,434, 0,1081,3536,5053,6825, -,-,-,-,-, 633847 Satellite W-chromosome 585 chrUn_NT_466020v1 9775 11820 GGXHOI 372 - 9775 11820 0 2 302,1723, 0,322, -,-, 633849 Satellite W-chromosome 585 chrUn_NT_466020v1 13203 15357 GGXHOI 347 - 13203 15357 0 2 1720,375, 0,1779, -,-, 633851 Satellite W-chromosome 585 chrUn_NT_466021v1 772 3423 GGERVL-B-int 727 + 772 3423 0 2 315,2336, 0,315, +,+, 633856 LTR ERVL 585 chrUn_NT_466021v1 4157 5552 GGLTR7-int 335 + 4157 5552 0 3 101,259,279, 0,103,1116, +,+,+, 633859 LTR ERV1 585 chrUn_NT_466023v1 13502 14507 CR1-H 429 + 13502 14507 0 3 630,120,119, 0,766,886, +,+,+, 633898 LINE CR1 585 chrUn_NT_466024v1 1849 5351 GGXHOI 364 + 1849 5351 0 3 333,1390,1704, 0,391,1798, +,+,+, 633902 Satellite W-chromosome 585 chrUn_NT_466025v1 10260 11002 CR1-F 279 - 10260 11002 0 2 574,168, 0,574, -,-, 633913 LINE CR1 585 chrUn_NT_466026v1 1093 1744 GGXHOI 391 - 1093 1744 0 3 106,359,155, 0,121,496, -,-,-, 633920 Satellite W-chromosome 585 chrUn_NT_466026v1 1864 15587 GGXHOI 455 - 1864 15587 0 15 568,275,863,229,1660,323,434,1370,395,1343,313,1431,1352,2095,789, 0,590,880,1764,2010,3688,4023,4479,5866,6278,7643,7973,9421,10795,12934, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 633921 Satellite W-chromosome 585 chrUn_NT_466027v1 1261 2193 GGXHOI 374 - 1261 2193 0 2 409,481, 0,451, -,-, 633924 Satellite W-chromosome 585 chrUn_NT_466027v1 2365 3167 GGXHOI 344 - 2365 3167 0 2 360,423, 0,379, -,-, 633925 Satellite W-chromosome 585 chrUn_NT_466027v1 3290 4192 GGXHOI 384 - 3290 4192 0 2 405,466, 0,436, -,-, 633926 Satellite W-chromosome 585 chrUn_NT_466027v1 4396 5719 GGXHOI 379 - 4396 5719 0 2 814,450, 0,873, -,-, 633927 Satellite W-chromosome 585 chrUn_NT_466027v1 6339 7219 GGXHOI 402 - 6339 7219 0 2 441,385, 0,495, -,-, 633929 Satellite W-chromosome 585 chrUn_NT_466027v1 7317 8669 GGXHOI 379 - 7317 8669 0 3 359,411,481, 0,417,871, -,-,-, 633930 Satellite W-chromosome 585 chrUn_NT_466027v1 8764 9665 GGXHOI 384 - 8764 9665 0 2 359,522, 0,379, -,-, 633931 Satellite W-chromosome 585 chrUn_NT_466027v1 10637 11466 GGXHOI 378 - 10637 11466 0 2 484,293, 0,536, -,-, 633934 Satellite W-chromosome 585 chrUn_NT_466027v1 12084 12891 GGXHOI 381 - 12084 12891 0 2 378,369, 0,438, -,-, 633936 Satellite W-chromosome 585 chrUn_NT_466027v1 12981 13732 GGXHOI 370 - 12981 13732 0 2 363,368, 0,383, -,-, 633937 Satellite W-chromosome 585 chrUn_NT_466027v1 13855 14842 GGXHOI 376 - 13855 14842 0 2 520,452, 0,535, -,-, 633938 Satellite W-chromosome 585 chrUn_NT_466028v1 7106 10876 CR1-F 876 - 7106 10876 0 2 2099,1671, 0,2099, -,-, 633952 LINE CR1 585 chrUn_NT_466028v1 11810 12655 GGLTR7-int 757 - 11810 12655 0 3 352,258,213, 0,352,632, -,-,-, 633953 LTR ERV1 585 chrUn_NT_466028v1 12893 15578 GGERV28_I-int 174 - 12893 15578 0 2 1992,376, 0,2309, -,-, 633954 LTR ERVK 585 chrUn_NT_466029v1 4469 5967 CR1-D 666 - 4469 5967 0 2 562,892, 0,606, -,-, 633960 LINE CR1 585 chrUn_NT_466030v1 6668 10979 GGERV20_I-int 478 - 6668 10979 0 3 865,238,521, 0,2781,3790, -,-,-, 633978 LTR ERVL 585 chrUn_NT_466030v1 11166 14123 GGERV20_I-int 456 - 11166 14123 0 4 492,67,489,299, 0,1068,1394,2658, -,-,-,-, 633983 LTR ERVL 585 chrUn_NT_466030v1 14739 16414 CR1-D 667 - 14739 16414 0 2 1174,483, 0,1192, -,-, 633987 LINE CR1 585 chrUn_NT_466031v1 12992 13071 (CCAG)n 1000 + 12992 13071 0 2 27,27, 0,52, +,+, 634021 Simple_repeat Simple_repeat 585 chrUn_NT_466034v1 1172 1478 CR1-X 469 - 1172 1478 0 3 56,74,170, 0,62,136, -,-,-, 634036 LINE CR1 585 chrUn_NT_466034v1 7860 8985 CR1-B2 681 - 7860 8985 0 2 897,225, 0,900, -,-, 634044 LINE CR1 585 chrUn_NT_466035v1 2799 3437 CR1-H 554 - 2799 3437 0 2 141,490, 0,148, -,-, 634048 LINE CR1 585 chrUn_NT_466035v1 5671 6939 CR1-H 548 - 5671 6939 0 2 116,1152, 0,116, -,-, 634051 LINE CR1 585 chrUn_NT_466036v1 8738 10506 GGERVL-A-int 734 + 8738 10506 0 2 459,1309, 0,459, +,+, 634062 LTR ERVL 585 chrUn_NT_466037v1 1530 2288 CR1-C2 691 + 1530 2288 0 2 406,57, 0,701, +,+, 634069 LINE CR1 585 chrUn_NT_466037v1 9416 10065 CR1-X2 592 - 9416 10065 0 2 63,356, 0,293, -,-, 634075 LINE CR1 585 chrUn_NT_466040v1 7007 8551 GGXHOI 379 - 7007 8551 0 2 1009,472, 0,1072, -,-, 634109 Satellite W-chromosome 585 chrUn_NT_466040v1 8650 9701 GGXHOI 378 - 8650 9701 0 2 516,472, 0,579, -,-, 634110 Satellite W-chromosome 585 chrUn_NT_466040v1 9800 10851 GGXHOI 378 - 9800 10851 0 2 516,472, 0,579, -,-, 634111 Satellite W-chromosome 585 chrUn_NT_466040v1 10950 12001 GGXHOI 378 - 10950 12001 0 2 516,472, 0,579, -,-, 634112 Satellite W-chromosome 585 chrUn_NT_466040v1 12100 13151 GGXHOI 378 - 12100 13151 0 2 516,472, 0,579, -,-, 634113 Satellite W-chromosome 585 chrUn_NT_466040v1 13250 14301 GGXHOI 378 - 13250 14301 0 2 516,472, 0,579, -,-, 634114 Satellite W-chromosome 585 chrUn_NT_466041v1 12362 14168 GGXHOI 419 + 12362 14168 0 3 725,573,474, 0,743,1332, +,+,+, 634118 Satellite W-chromosome 585 chrUn_NT_466041v1 14246 16083 GGXHOI 419 + 14246 16083 0 2 824,997, 0,840, +,+, 634119 Satellite W-chromosome 585 chrUn_NT_466042v1 3479 6662 GGXHOI 409 - 3479 6662 0 7 545,456,594,158,265,687,295, 0,558,1069,1697,1876,2178,2888, -,-,-,-,-,-,-, 634122 Satellite W-chromosome 585 chrUn_NT_466042v1 7008 12266 GGXHOI 397 - 7008 12266 0 18 249,342,134,378,350,343,372,489,173,180,204,141,130,164,347,138,436,169, 0,262,646,825,1250,1618,1980,2366,2873,3070,3302,3535,3691,3838,4063,4424,4594,5089, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 634124 Satellite W-chromosome 585 chrUn_NT_466042v1 12764 14500 GGXHOI 396 - 12764 14500 0 6 515,137,262,142,491,117, 0,528,676,951,1105,1619, -,-,-,-,-,-, 634126 Satellite W-chromosome 585 chrUn_NT_466042v1 14704 16375 GGXHOI 398 - 14704 16375 0 4 130,285,887,298, 0,143,467,1373, -,-,-,-, 634127 Satellite W-chromosome 585 chrUn_NT_466043v1 13813 14852 GGLTR7A 580 - 13813 14852 0 4 113,240,295,312, 0,116,357,727, -,-,-,-, 634135 LTR ERV1 585 chrUn_NT_466044v1 937 1573 CR1-H 343 + 937 1573 0 2 212,383, 0,253, +,+, 634138 LINE CR1 585 chrUn_NT_466044v1 3474 4097 CR1-H 383 + 3474 4097 0 2 209,378, 0,245, +,+, 634141 LINE CR1 585 chrUn_NT_466044v1 5958 6582 CR1-H 378 + 5958 6582 0 2 209,379, 0,245, +,+, 634144 LINE CR1 585 chrUn_NT_466044v1 8460 9083 CR1-H 377 + 8460 9083 0 2 209,378, 0,245, +,+, 634147 LINE CR1 585 chrUn_NT_466044v1 10951 11575 CR1-H 378 + 10951 11575 0 2 209,379, 0,245, +,+, 634150 LINE CR1 585 chrUn_NT_466045v1 13280 13885 GGLTR12C 394 - 13280 13885 0 2 295,295, 0,310, -,-, 634178 LTR ERVL 585 chrUn_NT_466047v1 7330 10492 GGXHOI 368 - 7330 10492 0 2 1387,1758, 0,1404, -,-, 634192 Satellite W-chromosome 585 chrUn_NT_466047v1 10578 11324 GGXHOI 335 - 10578 11324 0 2 247,482, 0,264, -,-, 634193 Satellite W-chromosome 585 chrUn_NT_466047v1 13276 16372 GGXHOI 394 - 13276 16372 0 5 933,672,134,424,875, 0,951,1636,1784,2221, -,-,-,-,-, 634195 Satellite W-chromosome 585 chrUn_NT_466049v1 1485 2419 GGXHOI 477 + 1485 2419 0 2 824,73, 0,861, +,+, 634201 Satellite W-chromosome 585 chrUn_NT_466049v1 2496 5588 GGXHOI 410 + 2496 5588 0 4 634,1677,530,210, 0,645,2338,2882, +,+,+,+, 634202 Satellite W-chromosome 585 chrUn_NT_466049v1 5668 6407 GGXHOI 339 + 5668 6407 0 3 275,126,306, 0,296,433, +,+,+, 634203 Satellite W-chromosome 585 chrUn_NT_466049v1 6497 14652 GGXHOI 390 + 6497 14652 0 9 3599,260,1837,537,967,216,96,133,348, 0,3614,3893,5782,6332,7314,7550,7658,7807, +,+,+,+,+,+,+,+,+, 634204 Satellite W-chromosome 585 chrUn_NT_466049v1 15123 15449 GGXHOI 351 + 15123 15449 0 2 130,142, 0,184, +,+, 634205 Satellite W-chromosome 585 chrUn_NT_466049v1 15521 16382 GGXHOI 335 + 15521 16382 0 3 344,144,318, 0,385,543, +,+,+, 634206 Satellite W-chromosome 585 chrUn_NT_466050v1 3466 3923 CR1-H 677 - 3466 3923 0 2 163,294, 0,163, -,-, 634211 LINE CR1 585 chrUn_NT_466050v1 14163 14783 CR1-H 676 - 14163 14783 0 2 139,475, 0,145, -,-, 634220 LINE CR1 585 chrUn_NT_466051v1 1090 2870 GGXHOI 375 - 1090 2870 0 2 1087,631, 0,1149, -,-, 634224 Satellite W-chromosome 585 chrUn_NT_466051v1 11781 14446 GGXHOI 379 - 11781 14446 0 6 303,709,72,466,432,395, 0,364,1120,1253,1776,2270, -,-,-,-,-,-, 634234 Satellite W-chromosome 585 chrUn_NT_466051v1 14611 15654 GGXHOI 364 - 14611 15654 0 2 508,472, 0,571, -,-, 634235 Satellite W-chromosome 585 chrUn_NT_466053v1 10324 10946 CR1-H 679 - 10324 10946 0 2 139,477, 0,145, -,-, 634247 LINE CR1 585 chrUn_NT_466053v1 13201 13658 CR1-H 679 - 13201 13658 0 2 163,294, 0,163, -,-, 634251 LINE CR1 585 chrUn_NT_466054v1 3985 5072 CR1-B2 612 + 3985 5072 0 2 228,856, 0,231, +,+, 634257 LINE CR1 585 chrUn_NT_466055v1 7800 8239 GGXHOI 370 - 7800 8239 0 2 138,245, 0,194, -,-, 634276 Satellite W-chromosome 585 chrUn_NT_466055v1 13011 13396 GGXHOI 319 - 13011 13396 0 2 138,235, 0,150, -,-, 634281 Satellite W-chromosome 585 chrUn_NT_466055v1 14799 15246 GGXHOI 325 - 14799 15246 0 2 226,179, 0,268, -,-, 634282 Satellite W-chromosome 585 chrUn_NT_466056v1 6241 7996 CR1-X 429 - 6241 7996 0 4 221,132,171,111, 0,263,395,1644, -,-,-,-, 634289 LINE CR1 585 chrUn_NT_466056v1 13125 14251 CR1-B2 692 + 13125 14251 0 2 225,898, 0,228, +,+, 634294 LINE CR1 585 chrUn_NT_466057v1 3232 5159 GGLTR7-int 669 - 3232 5159 0 4 34,74,659,530, 0,34,738,1397, -,-,-,-, 634302 LTR ERV1 585 chrUn_NT_466058v1 9037 9654 GGERV28_I-int 374 + 9037 9654 0 2 88,86, 0,531, +,+, 634321 LTR ERVK 585 chrUn_NT_466060v1 6162 16334 GGXHOI 398 - 6162 16334 0 8 1250,3536,1298,1095,178,848,233,1544, 0,1282,4850,6180,7300,7510,8372,8628, -,-,-,-,-,-,-,-, 634338 Satellite W-chromosome 585 chrUn_NT_466062v1 4275 5242 GGXHOI 322 + 4275 5242 0 2 825,126, 0,841, +,+, 634344 Satellite W-chromosome 585 chrUn_NT_466062v1 5329 7957 GGXHOI 451 + 5329 7957 0 3 674,1077,830, 0,693,1798, +,+,+, 634345 Satellite W-chromosome 585 chrUn_NT_466062v1 8129 9995 GGXHOI 441 + 8129 9995 0 2 1550,275, 0,1591, +,+, 634346 Satellite W-chromosome 585 chrUn_NT_466062v1 10161 15113 GGXHOI 404 + 10161 15113 0 5 830,2323,640,680,349, 0,859,3210,3888,4603, +,+,+,+,+, 634347 Satellite W-chromosome 585 chrUn_NT_466063v1 1173 3662 GGXHOI 398 - 1173 3662 0 2 1274,1199, 0,1290, -,-, 634351 Satellite W-chromosome 585 chrUn_NT_466063v1 3739 9481 GGXHOI 383 - 3739 9481 0 8 142,1186,655,904,1124,624,508,443, 0,158,1378,2049,2968,4108,4749,5299, -,-,-,-,-,-,-,-, 634352 Satellite W-chromosome 585 chrUn_NT_466063v1 9563 11272 GGXHOI 334 - 9563 11272 0 5 492,129,252,350,358, 0,526,678,945,1351, -,-,-,-,-, 634353 Satellite W-chromosome 585 chrUn_NT_466063v1 11654 15854 GGXHOI 380 - 11654 15854 0 5 2047,124,920,784,247, 0,2071,2221,3155,3953, -,-,-,-,-, 634355 Satellite W-chromosome 585 chrUn_NT_466063v1 15993 16331 GGXHOI 348 - 15993 16331 0 2 176,102, 0,236, -,-, 634356 Satellite W-chromosome 585 chrUn_NT_466064v1 10464 12376 GGXHOI 390 - 10464 12376 0 2 586,1298, 0,614, -,-, 634363 Satellite W-chromosome 585 chrUn_NT_466066v1 1121 2170 GGXHOI 378 - 1121 2170 0 2 514,472, 0,577, -,-, 634390 Satellite W-chromosome 585 chrUn_NT_466066v1 5700 6662 GGXHOI 384 - 5700 6662 0 2 515,384, 0,578, -,-, 634396 Satellite W-chromosome 585 chrUn_NT_466067v1 527 1067 GGXHOI 379 - 527 1067 0 3 112,148,246, 0,131,294, -,-,-, 634412 Satellite W-chromosome 585 chrUn_NT_466067v1 2696 3686 GGXHOI 419 - 2696 3686 0 3 484,146,336, 0,497,654, -,-,-, 634414 Satellite W-chromosome 585 chrUn_NT_466067v1 3768 6278 GGXHOI 394 - 3768 6278 0 3 433,1714,333, 0,448,2177, -,-,-, 634415 Satellite W-chromosome 585 chrUn_NT_466067v1 6363 8414 GGXHOI 414 - 6363 8414 0 5 323,193,982,144,326, 0,354,572,1566,1725, -,-,-,-,-, 634416 Satellite W-chromosome 585 chrUn_NT_466067v1 11119 14702 GGXHOI 392 - 11119 14702 0 4 605,1648,910,333, 0,620,2325,3250, -,-,-,-, 634419 Satellite W-chromosome 585 chrUn_NT_466068v1 5183 6248 GGXHOI 368 - 5183 6248 0 2 322,720, 0,345, -,-, 634439 Satellite W-chromosome 585 chrUn_NT_466068v1 7535 9075 GGXHOI 375 - 7535 9075 0 2 1005,472, 0,1068, -,-, 634442 Satellite W-chromosome 585 chrUn_NT_466068v1 10933 12477 GGXHOI 379 - 10933 12477 0 2 1009,472, 0,1072, -,-, 634445 Satellite W-chromosome 585 chrUn_NT_466070v1 14441 14661 CR1-H 684 + 14441 14661 0 2 96,115, 0,105, +,+, 634472 LINE CR1 585 chrUn_NT_466071v1 200 1355 (CGAGG)n 482 + 200 1355 0 2 826,327, 0,828, +,+, 634475 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 1780 2717 (CGAGG)n 494 + 1780 2717 0 2 284,642, 0,295, +,+, 634477 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 3653 4166 (CGAGG)n 470 + 3653 4166 0 2 214,121, 0,392, +,+, 634483 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 4480 5038 (CGAGG)n 518 + 4480 5038 0 2 157,388, 0,170, +,+, 634487 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 5882 6290 (CGAGG)n 563 + 5882 6290 0 2 181,177, 0,231, +,+, 634490 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 6547 7301 (CCTCG)n 502 + 6547 7301 0 2 531,190, 0,564, +,+, 634493 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 7403 9461 (CCTCG)n 533 + 7403 9461 0 7 222,64,96,75,93,187,367, 0,405,503,1101,1362,1480,1691, +,+,+,+,+,+,+, 634495 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 9433 10252 (CCTCG)n 618 + 9433 10252 0 3 249,306,67, 0,261,752, +,+,+, 634502 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 10653 11600 (CCTCG)n 536 + 10653 11600 0 2 190,740, 0,207, +,+, 634508 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 12305 13220 (CCTCG)n 556 + 12305 13220 0 3 485,175,185, 0,520,730, +,+,+, 634513 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 13795 14167 (CCTCG)n 521 + 13795 14167 0 2 109,244, 0,128, +,+, 634516 Simple_repeat Simple_repeat 585 chrUn_NT_466071v1 14359 15932 (CCTCG)n 532 + 14359 15932 0 5 277,297,380,272,179, 0,320,659,1095,1394, +,+,+,+,+, 634518 Simple_repeat Simple_repeat 585 chrUn_NT_466073v1 10568 12628 GGLTR7-int 656 + 10568 12628 0 3 1322,74,33, 0,1952,2027, +,+,+, 634532 LTR ERV1 585 chrUn_NT_466074v1 13586 14633 GGXHOI 373 - 13586 14633 0 2 512,472, 0,575, -,-, 634550 Satellite W-chromosome 585 chrUn_NT_466074v1 14732 16259 GGXHOI 373 - 14732 16259 0 2 516,948, 0,579, -,-, 634551 Satellite W-chromosome 585 chrUn_NT_466075v1 862 4429 GGLTR7A 563 - 862 4429 0 2 334,3153, 0,414, -,-, 634556 LTR ERV1 585 chrUn_NT_466075v1 4776 6101 (CAAGG)n 518 + 4776 6101 0 4 238,90,495,253, 0,460,550,1072, +,+,+,+, 634561 Simple_repeat Simple_repeat 585 chrUn_NT_466075v1 6201 6966 (CAAGG)n 486 + 6201 6966 0 2 281,305, 0,460, +,+, 634564 Simple_repeat Simple_repeat 585 chrUn_NT_466078v1 3222 4819 GGXHOI 376 - 3222 4819 0 3 387,387,789, 0,406,808, -,-,-, 634609 Satellite W-chromosome 585 chrUn_NT_466078v1 9282 10099 GGXHOI 389 - 9282 10099 0 2 444,358, 0,459, -,-, 634617 Satellite W-chromosome 585 chrUn_NT_466078v1 11192 13036 GGXHOI 383 - 11192 13036 0 5 350,395,449,108,373, 0,405,856,1348,1471, -,-,-,-,-, 634620 Satellite W-chromosome 585 chrUn_NT_466079v1 5722 6500 CR1-F 283 + 5722 6500 0 2 204,574, 0,204, +,+, 634632 LINE CR1 585 chrUn_NT_466079v1 9655 10321 GGLTR3F2 604 + 9655 10321 0 3 230,226,157, 0,281,509, +,+,+, 634635 LTR ERVL 585 chrUn_NT_466080v1 550 11980 GGXHOI 406 - 550 11980 0 5 789,739,5155,1810,2860, 0,808,1571,6749,8570, -,-,-,-,-, 634643 Satellite W-chromosome 585 chrUn_NT_466080v1 12138 14347 GGXHOI 411 - 12138 14347 0 2 1605,552, 0,1657, -,-, 634644 Satellite W-chromosome 585 chrUn_NT_466080v1 14611 16286 GGXHOI 413 - 14611 16286 0 2 426,1226, 0,449, -,-, 634645 Satellite W-chromosome 585 chrUn_NT_466082v1 1129 2955 GGXHOI 508 + 1129 2955 0 2 1094,690, 0,1136, +,+, 634648 Satellite W-chromosome 585 chrUn_NT_466082v1 3096 4181 GGXHOI 541 + 3096 4181 0 3 125,357,333, 0,352,752, +,+,+, 634649 Satellite W-chromosome 585 chrUn_NT_466082v1 5877 7973 GGXHOI 551 + 5877 7973 0 2 1838,235, 0,1861, +,+, 634653 Satellite W-chromosome 585 chrUn_NT_466082v1 11897 13211 GGXHOI 576 + 11897 13211 0 2 360,728, 0,586, +,+, 634657 Satellite W-chromosome 585 chrUn_NT_466082v1 13277 14069 GGXHOI 598 + 13277 14069 0 2 362,227, 0,565, +,+, 634659 Satellite W-chromosome 585 chrUn_NT_466082v1 14723 15989 GGXHOI 542 + 14723 15989 0 2 360,703, 0,563, +,+, 634662 Satellite W-chromosome 585 chrUn_NT_466084v1 1170 13169 GGXHOI 399 + 1170 13169 0 9 466,1325,917,1353,1723,1725,1717,1725,904, 0,483,1826,2759,4129,5869,7611,9353,11095, +,+,+,+,+,+,+,+,+, 634677 Satellite W-chromosome 585 chrUn_NT_466084v1 15284 16294 GGXHOI 349 + 15284 16294 0 2 168,800, 0,210, +,+, 634680 Satellite W-chromosome 585 chrUn_NT_466086v1 11011 11203 CR1-F2 512 + 11011 11203 0 2 98,94, 0,98, +,+, 634707 LINE CR1 585 chrUn_NT_466086v1 11291 11671 CR1-F2 390 + 11291 11671 0 4 96,92,96,95, 0,96,189,285, +,+,+,+, 634708 LINE CR1 585 chrUn_NT_466087v1 1032 3325 GGXHOI 340 - 1032 3325 0 3 951,144,1104, 0,1001,1189, -,-,-, 634716 Satellite W-chromosome 585 chrUn_NT_466087v1 6360 6760 GGXHOI 294 - 6360 6760 0 2 133,223, 0,177, -,-, 634719 Satellite W-chromosome 585 chrUn_NT_466087v1 6839 11182 GGXHOI 378 - 6839 11182 0 8 1138,184,637,107,270,516,798,538, 0,1164,1361,2024,2155,2443,2996,3805, -,-,-,-,-,-,-,-, 634720 Satellite W-chromosome 585 chrUn_NT_466087v1 12695 15362 GGXHOI 378 - 12695 15362 0 3 155,1127,1341, 0,176,1326, -,-,-, 634722 Satellite W-chromosome 585 chrUn_NT_466088v1 12154 13232 CR1-D 536 + 12154 13232 0 2 275,779, 0,299, +,+, 634730 LINE CR1 585 chrUn_NT_466090v1 3647 3893 Char12Mar1_GG 514 - 3647 3893 0 2 72,174, 0,72, -,-, 634749 DNA hAT-Charlie 585 chrUn_NT_466091v1 611 3190 GGXHOI 525 - 611 3190 0 5 488,37,297,194,522, 0,504,919,1541,2057, -,-,-,-,-, 634755 Satellite W-chromosome 585 chrUn_NT_466091v1 3655 7800 GGXHOI 544 - 3655 7800 0 8 296,223,343,298,307,149,247,195, 0,589,1231,1621,2205,2834,3380,3950, -,-,-,-,-,-,-,-, 634760 Satellite W-chromosome 585 chrUn_NT_466091v1 8381 9512 GGXHOI 550 - 8381 9512 0 2 18,804, 0,327, -,-, 634769 Satellite W-chromosome 585 chrUn_NT_466091v1 9581 15024 GGXHOI 524 - 9581 15024 0 10 26,619,17,316,294,111,308,185,237,719, 0,336,1025,1366,1871,2488,2992,3611,4165,4724, -,-,-,-,-,-,-,-,-,-, 634771 Satellite W-chromosome 585 chrUn_NT_466091v1 15385 16283 GGXHOI 508 - 15385 16283 0 2 221,422, 0,476, -,-, 634781 Satellite W-chromosome 585 chrUn_NT_466092v1 474 1216 (ACCCATAGAG)n 670 - 474 1216 0 2 140,514, 0,228, -,-, 634786 Satellite Satellite 585 chrUn_NT_466092v1 4271 4725 (ACCCCATAGGG)n 698 + 4271 4725 0 2 241,86, 0,368, +,+, 634790 Satellite Satellite 585 chrUn_NT_466093v1 58 441 (CGAGG)n 519 + 58 441 0 2 183,186, 0,197, +,+, 634797 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 780 1607 (CGAGG)n 476 + 780 1607 0 2 253,559, 0,268, +,+, 634799 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 1651 2843 (CGAGG)n 553 + 1651 2843 0 4 268,181,185,475, 0,312,507,717, +,+,+,+, 634801 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 2939 3634 (CGAGG)n 588 + 2939 3634 0 2 227,293, 0,402, +,+, 634802 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 4516 5852 (CGAGG)n 633 + 4516 5852 0 4 184,152,319,332, 0,184,507,1004, +,+,+,+, 634807 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 6369 8140 (CGAGG)n 573 + 6369 8140 0 4 390,291,341,198, 0,759,1232,1573, +,+,+,+, 634813 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 8402 9005 (CGAGG)n 599 + 8402 9005 0 2 190,375, 0,228, +,+, 634819 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 9600 9945 (CAAGG)n 464 + 9600 9945 0 2 108,53, 0,292, +,+, 634824 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 9927 11281 (CGAGG)n 634 + 9927 11281 0 4 115,187,406,287, 0,274,475,1067, +,+,+,+, 634826 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 11310 12274 (CGAGG)n 598 + 11310 12274 0 4 220,24,228,184, 0,493,534,780, +,+,+,+, 634831 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 12341 13344 (CGAGG)n 609 + 12341 13344 0 3 287,126,389, 0,461,614, +,+,+, 634833 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 13431 13967 (CGAGG)n 558 + 13431 13967 0 2 208,147, 0,389, +,+, 634836 Simple_repeat Simple_repeat 585 chrUn_NT_466093v1 14480 15055 (CGAGG)n 592 + 14480 15055 0 2 277,119, 0,456, +,+, 634842 Simple_repeat Simple_repeat 585 chrUn_NT_466094v1 1246 6034 GGXHOI 514 - 1246 6034 0 8 163,512,199,315,821,700,374,341, 0,213,748,1218,1583,2897,3636,4447, -,-,-,-,-,-,-,-, 634854 Satellite W-chromosome 585 chrUn_NT_466094v1 6116 9886 GGXHOI 488 - 6116 9886 0 6 275,489,56,379,1447,531, 0,316,1031,1329,1742,3239, -,-,-,-,-,-, 634858 Satellite W-chromosome 585 chrUn_NT_466094v1 9952 14774 GGXHOI 497 - 9952 14774 0 3 1104,2387,894, 0,1115,3928, -,-,-, 634861 Satellite W-chromosome 585 chrUn_NT_466094v1 14839 15616 GGXHOI 548 - 14839 15616 0 2 487,90, 0,687, -,-, 634864 Satellite W-chromosome 585 chrUn_NT_466094v1 15698 16276 GGXHOI 584 - 15698 16276 0 2 163,366, 0,212, -,-, 634866 Satellite W-chromosome 585 chrUn_NT_466095v1 76 1635 (CGAGG)n 524 + 76 1635 0 2 690,690, 0,869, +,+, 634869 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 2069 2731 (CGAGG)n 542 + 2069 2731 0 2 176,470, 0,192, +,+, 634874 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 2833 3419 (CGAGG)n 568 + 2833 3419 0 2 326,80, 0,506, +,+, 634875 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 3534 4238 (CGAGG)n 551 + 3534 4238 0 2 74,614, 0,90, +,+, 634878 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 4388 7309 (CGAGG)n 542 + 4388 7309 0 5 96,492,361,142,1279, 0,270,939,1479,1642, +,+,+,+,+, 634880 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 7398 8116 (CGAGG)n 559 + 7398 8116 0 3 256,90,181, 0,431,537, +,+,+, 634884 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 9089 10605 (CGAGG)n 541 + 9089 10605 0 3 604,486,242, 0,783,1274, +,+,+, 634891 Simple_repeat Simple_repeat 585 chrUn_NT_466095v1 12472 15192 (CGAGG)n 517 + 12472 15192 0 7 859,283,329,99,309,158,382, 0,906,1223,1727,1846,2167,2338, +,+,+,+,+,+,+, 634900 Simple_repeat Simple_repeat 585 chrUn_NT_466097v1 1436 3021 GGXHOI 377 + 1436 3021 0 3 290,303,958, 0,305,627, +,+,+, 634912 Satellite W-chromosome 585 chrUn_NT_466097v1 3458 9708 GGXHOI 378 + 3458 9708 0 5 4878,266,190,624,207, 0,4894,5172,5380,6043, +,+,+,+,+, 634915 Satellite W-chromosome 585 chrUn_NT_466097v1 11792 16258 GGXHOI 399 + 11792 16258 0 5 1244,674,529,56,1899, 0,1266,1952,2496,2567, +,+,+,+,+, 634917 Satellite W-chromosome 585 chrUn_NT_466098v1 3530 3916 (CAAGG)n 583 + 3530 3916 0 3 65,58,210, 0,118,176, +,+,+, 634922 Simple_repeat Simple_repeat 585 chrUn_NT_466098v1 4389 5039 (CAGGC)n 638 + 4389 5039 0 4 186,25,209,171, 0,197,228,479, +,+,+,+, 634928 Simple_repeat Simple_repeat 585 chrUn_NT_466098v1 5939 6404 (CAAGG)n 544 + 5939 6404 0 2 269,196, 0,269, +,+, 634934 Simple_repeat Simple_repeat 585 chrUn_NT_466098v1 12280 12905 G-rich 378 + 12280 12905 0 2 87,512, 0,113, +,+, 634939 Low_complexity Low_complexity 585 chrUn_NT_466100v1 15598 15740 CR1-C4 802 - 15598 15740 0 3 55,44,43, 0,55,99, -,-,-, 634963 LINE CR1 585 chrUn_NT_466100v1 15796 15953 CR1-C4 699 - 15796 15953 0 3 72,41,44, 0,72,113, -,-,-, 634964 LINE CR1 585 chrUn_NT_466101v1 251 772 (TTAGGG)n 546 + 251 772 0 2 120,227, 0,294, +,+, 634968 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 1047 1610 (CAAGG)n 594 + 1047 1610 0 2 176,368, 0,195, +,+, 634971 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 1557 2918 (CAGGC)n 604 + 1557 2918 0 5 129,11,36,124,52, 0,600,791,843,1309, +,+,+,+,+, 634972 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 1686 2157 (CAAGG)n 558 + 1686 2157 0 2 177,294, 0,177, +,+, 634973 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 2524 2866 (CTAGG)n 426 + 2524 2866 0 2 120,45, 0,297, +,+, 634975 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 4436 4820 (CAAGG)n 633 + 4436 4820 0 2 180,187, 0,197, +,+, 634984 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 4895 5350 (CAAGG)n 652 + 4895 5350 0 2 229,47, 0,408, +,+, 634985 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 5362 6241 (CAAGG)n 631 + 5362 6241 0 3 307,189,174, 0,324,705, +,+,+, 634988 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 6103 6772 (CAGGC)n 516 + 6103 6772 0 3 214,27,72, 0,394,597, +,+,+, 634990 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 6987 7975 (CAAGG)n 623 + 6987 7975 0 3 176,511,119, 0,176,869, +,+,+, 634995 Simple_repeat Simple_repeat 585 chrUn_NT_466101v1 8237 10464 GGXHOI 399 - 8237 10464 0 4 405,117,146,1504, 0,424,560,723, -,-,-,-, 634999 Satellite W-chromosome 585 chrUn_NT_466101v1 10699 16424 GGXHOI 380 - 10699 16424 0 10 231,988,534,420,211,108,136,739,1654,411, 0,273,1284,1846,2311,2569,2699,2858,3635,5314, -,-,-,-,-,-,-,-,-,-, 635000 Satellite W-chromosome 585 chrUn_NT_466103v1 2549 3864 GGXHOI 579 + 2549 3864 0 2 940,348, 0,967, +,+, 635023 Satellite W-chromosome 585 chrUn_NT_466103v1 3931 4719 GGXHOI 596 + 3931 4719 0 2 358,227, 0,561, +,+, 635024 Satellite W-chromosome 585 chrUn_NT_466103v1 5561 7487 GGXHOI 592 + 5561 7487 0 2 778,1104, 0,822, +,+, 635027 Satellite W-chromosome 585 chrUn_NT_466103v1 8145 9461 GGXHOI 582 + 8145 9461 0 2 1024,248, 0,1068, +,+, 635029 Satellite W-chromosome 585 chrUn_NT_466103v1 11135 13558 GGXHOI 558 + 11135 13558 0 5 113,228,149,1357,246, 0,313,603,796,2177, +,+,+,+,+, 635032 Satellite W-chromosome 585 chrUn_NT_466103v1 14608 15316 GGXHOI 490 + 14608 15316 0 2 268,171, 0,537, +,+, 635036 Satellite W-chromosome 585 chrUn_NT_466104v1 12426 14404 GGLTR7-int 704 - 12426 14404 0 2 35,1277, 0,701, -,-, 635053 LTR ERV1 585 chrUn_NT_466105v1 4432 4774 (CAAGG)n 590 + 4432 4774 0 2 89,73, 0,269, +,+, 635061 Simple_repeat Simple_repeat 585 chrUn_NT_466105v1 4894 5570 (CAGGC)n 507 + 4894 5570 0 2 448,211, 0,465, +,+, 635064 Simple_repeat Simple_repeat 585 chrUn_NT_466105v1 6014 6403 (CAAGG)n 659 + 6014 6403 0 2 180,209, 0,180, +,+, 635068 Simple_repeat Simple_repeat 585 chrUn_NT_466106v1 5649 6790 CR1-D 735 - 5649 6790 0 2 793,328, 0,813, -,-, 635084 LINE CR1 585 chrUn_NT_466109v1 2929 4131 GGXHOI 382 + 2929 4131 0 2 785,361, 0,841, +,+, 635120 Satellite W-chromosome 585 chrUn_NT_466109v1 5443 7579 GGXHOI 373 + 5443 7579 0 4 835,361,524,361, 0,855,1231,1775, +,+,+,+, 635123 Satellite W-chromosome 585 chrUn_NT_466109v1 8344 9974 GGXHOI 413 + 8344 9974 0 3 795,397,403, 0,810,1227, +,+,+, 635125 Satellite W-chromosome 585 chrUn_NT_466109v1 14724 15390 GGXHOI 336 + 14724 15390 0 2 332,291, 0,375, +,+, 635132 Satellite W-chromosome 585 chrUn_NT_466111v1 11133 12629 GGLTR7B 585 - 11133 12629 0 2 114,889, 0,607, -,-, 635149 LTR ERV1 585 chrUn_NT_466112v1 9998 11992 GGXHOI 401 - 9998 11992 0 2 1107,864, 0,1130, -,-, 635155 Satellite W-chromosome 585 chrUn_NT_466112v1 12100 16204 GGXHOI 372 - 12100 16204 0 4 99,974,2395,588, 0,120,1106,3516, -,-,-,-, 635156 Satellite W-chromosome 585 chrUn_NT_466113v1 3336 9769 Charlie12_GG 522 - 3336 9769 0 2 67,67, 0,6366, -,-, 635162 DNA hAT-Charlie 585 chrUn_NT_466114v1 1710 4784 GGERVL-C-int 870 - 1710 4784 0 2 523,2551, 0,523, -,-, 635184 LTR ERVL 585 chrUn_NT_466114v1 4797 7896 GGERVL-B-int 812 - 4797 7896 0 2 2626,471, 0,2628, -,-, 635185 LTR ERVL 585 chrUn_NT_466114v1 9516 10366 ENS3-int 437 + 9516 10366 0 2 247,596, 0,254, +,+, 635190 LTR ERVL 585 chrUn_NT_466114v1 10366 10950 GGLTR11 586 - 10366 10950 0 2 486,59, 0,525, -,-, 635191 LTR ERV1 585 chrUn_NT_466114v1 11357 15108 GGLTR3E2 647 - 11357 15108 0 3 351,193,3176, 0,382,575, -,-,-, 635192 LTR ERVL 585 chrUn_NT_466115v1 1173 2482 CR1-H2 897 - 1173 2482 0 2 39,660, 0,649, -,-, 635197 LINE CR1 585 chrUn_NT_466115v1 2467 4397 GGLTR7-int 234 - 2467 4397 0 5 137,103,475,248,292, 0,769,887,1362,1638, -,-,-,-,-, 635199 LTR ERV1 585 chrUn_NT_466115v1 5276 5875 CR1-C3 700 - 5276 5875 0 2 258,341, 0,258, -,-, 635204 LINE CR1 585 chrUn_NT_466115v1 7019 14079 CR1-C2 787 + 7019 14079 0 2 1163,678, 0,6382, +,+, 635207 LINE CR1 585 chrUn_NT_466115v1 8362 12582 GGLTR7-int 874 + 8362 12582 0 3 600,1081,2538, 0,600,1682, +,+,+, 635209 LTR ERV1 585 chrUn_NT_466115v1 14079 16188 GGERV20_I-int 961 + 14079 16188 0 3 220,410,1478, 0,221,631, +,+,+, 635211 LTR ERVL 585 chrUn_NT_466116v1 724 6057 GGXHOI 560 - 724 6057 0 4 765,370,388,786, 0,1208,2962,4547, -,-,-,-, 635214 Satellite W-chromosome 585 chrUn_NT_466116v1 6101 7034 GGXHOI 589 - 6101 7034 0 2 162,727, 0,206, -,-, 635219 Satellite W-chromosome 585 chrUn_NT_466116v1 7891 10423 GGXHOI 571 - 7891 10423 0 5 163,156,85,408,701, 0,204,754,853,1831, -,-,-,-,-, 635223 Satellite W-chromosome 585 chrUn_NT_466116v1 13934 16190 GGXHOI 576 - 13934 16190 0 2 1218,288, 0,1968, -,-, 635231 Satellite W-chromosome 585 chrUn_NT_466117v1 245 743 (GCCTG)n 523 + 245 743 0 2 177,304, 0,194, +,+, 635234 Simple_repeat Simple_repeat 585 chrUn_NT_466117v1 3774 6605 GGERVL-B-int 696 + 3774 6605 0 2 1926,905, 0,1926, +,+, 635241 LTR ERVL 585 chrUn_NT_466117v1 7341 8742 GGLTR7-int 321 + 7341 8742 0 3 102,293,290, 0,128,1111, +,+,+, 635244 LTR ERV1 585 chrUn_NT_466119v1 9051 10099 GGXHOI 379 + 9051 10099 0 2 435,594, 0,454, +,+, 635258 Satellite W-chromosome 585 chrUn_NT_466119v1 11355 13538 GGXHOI 355 + 11355 13538 0 3 993,561,593, 0,1010,1590, +,+,+, 635260 Satellite W-chromosome 585 chrUn_NT_466119v1 13604 14942 GGXHOI 325 + 13604 14942 0 2 987,299, 0,1039, +,+, 635261 Satellite W-chromosome 585 chrUn_NT_466121v1 457 2598 GGXHOI 534 + 457 2598 0 4 693,197,223,19, 0,1015,1623,2122, +,+,+,+, 635276 Satellite W-chromosome 585 chrUn_NT_466121v1 2675 3723 GGXHOI 556 + 2675 3723 0 3 111,194,128, 0,523,920, +,+,+, 635280 Satellite W-chromosome 585 chrUn_NT_466121v1 3877 15083 GGXHOI 546 + 3877 15083 0 20 95,194,300,194,197,194,197,194,299,194,299,194,197,194,127,187,334,193,298,446, 0,406,923,1534,2051,2661,3178,3789,4306,4916,5433,6044,6561,7171,7688,8313,8823,9468,9985,10760, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 635283 Satellite W-chromosome 585 chrUn_NT_466123v1 185 1007 (CAGGC)n 484 + 185 1007 0 3 194,199,378, 0,194,444, +,+,+, 635353 Simple_repeat Simple_repeat 585 chrUn_NT_466123v1 1073 1301 (CAAGG)n 500 + 1073 1301 0 2 180,30, 0,198, +,+, 635354 Simple_repeat Simple_repeat 585 chrUn_NT_466123v1 1632 2005 (CAGGC)n 430 + 1632 2005 0 2 169,17, 0,356, +,+, 635359 Simple_repeat Simple_repeat 585 chrUn_NT_466123v1 2868 3239 (CAGGC)n 583 + 2868 3239 0 2 177,179, 0,192, +,+, 635369 Simple_repeat Simple_repeat 585 chrUn_NT_466123v1 3251 3799 (CAAGG)n 488 + 3251 3799 0 2 123,144, 0,404, +,+, 635370 Simple_repeat Simple_repeat 585 chrUn_NT_466125v1 2745 3870 CR1-B2 696 - 2745 3870 0 2 897,225, 0,900, -,-, 635405 LINE CR1 585 chrUn_NT_466127v1 1052 3503 GGLTR7-int 591 - 1052 3503 0 2 793,334, 0,2117, -,-, 635430 LTR ERV1 585 chrUn_NT_466128v1 1674 4086 GGLTR7-int 501 + 1674 4086 0 2 330,782, 0,1630, +,+, 635445 LTR ERV1 585 chrUn_NT_466128v1 4260 6452 GGLTR10D-int 871 - 4260 6452 0 2 357,1832, 0,360, -,-, 635448 LTR ERVK 585 chrUn_NT_466128v1 6493 7463 (CGAGG)n 467 + 6493 7463 0 3 425,185,318, 0,448,652, +,+,+, 635450 Simple_repeat Simple_repeat 585 chrUn_NT_466128v1 8338 9011 (CGAGG)n 471 + 8338 9011 0 3 203,66,186, 0,389,487, +,+,+, 635455 Simple_repeat Simple_repeat 585 chrUn_NT_466128v1 10029 10942 (CGAGG)n 474 + 10029 10942 0 3 324,173,334, 0,367,579, +,+,+, 635462 Simple_repeat Simple_repeat 585 chrUn_NT_466128v1 12219 12980 (CGAGG)n 540 + 12219 12980 0 2 179,570, 0,191, +,+, 635467 Simple_repeat Simple_repeat 585 chrUn_NT_466128v1 13081 13499 (CGAGG)n 516 + 13081 13499 0 2 173,233, 0,185, +,+, 635469 Simple_repeat Simple_repeat 585 chrUn_NT_466128v1 13693 14390 (CGAGG)n 517 + 13693 14390 0 2 178,463, 0,234, +,+, 635471 Simple_repeat Simple_repeat 585 chrUn_NT_466128v1 15102 16108 (CGAGG)n 470 + 15102 16108 0 2 467,527, 0,479, +,+, 635475 Simple_repeat Simple_repeat 585 chrUn_NT_466129v1 10792 11395 GGXHOI 393 - 10792 11395 0 2 402,147, 0,456, -,-, 635477 Satellite W-chromosome 585 chrUn_NT_466129v1 11761 15498 GGXHOI 396 - 11761 15498 0 5 472,447,140,1341,1215, 0,493,988,1151,2522, -,-,-,-,-, 635478 Satellite W-chromosome 585 chrUn_NT_466131v1 7555 8175 CR1-H 683 - 7555 8175 0 2 139,475, 0,145, -,-, 635500 LINE CR1 585 chrUn_NT_466133v1 597 5411 GGXHOI 396 - 597 5411 0 6 663,275,844,309,1463,1176, 0,681,972,1832,2164,3638, -,-,-,-,-,-, 635532 Satellite W-chromosome 585 chrUn_NT_466133v1 5793 11456 GGXHOI 364 - 5793 11456 0 6 868,317,1011,1348,1434,583, 0,886,1221,2257,3628,5080, -,-,-,-,-,-, 635534 Satellite W-chromosome 585 chrUn_NT_466133v1 11576 11964 GGXHOI 328 - 11576 11964 0 2 201,129, 0,259, -,-, 635535 Satellite W-chromosome 585 chrUn_NT_466133v1 12295 13782 GGXHOI 335 - 12295 13782 0 2 1230,239, 0,1248, -,-, 635536 Satellite W-chromosome 585 chrUn_NT_466133v1 14305 15866 GGXHOI 337 - 14305 15866 0 2 808,737, 0,824, -,-, 635538 Satellite W-chromosome 585 chrUn_NT_466134v1 10616 16162 GGLTR7A 865 - 10616 16162 0 2 609,4937, 0,609, -,-, 635545 LTR ERV1 585 chrUn_NT_466136v1 3329 4859 GGXHOI 606 - 3329 4859 0 2 404,570, 0,960, -,-, 635562 Satellite W-chromosome 585 chrUn_NT_466136v1 5585 9727 GGXHOI 566 - 5585 9727 0 5 246,499,542,457,454, 0,298,1353,2568,3688, -,-,-,-,-, 635565 Satellite W-chromosome 585 chrUn_NT_466136v1 10451 16110 GGXHOI 576 - 10451 16110 0 10 407,299,147,299,147,299,148,299,145,291, 0,1080,1390,2210,2520,3340,3650,4472,4782,5368, -,-,-,-,-,-,-,-,-,-, 635570 Satellite W-chromosome 585 chrUn_NT_466138v1 176 4363 GGXHOI 597 - 176 4363 0 7 832,407,573,14,260,416,147, 0,874,1838,2762,2795,3613,4040, -,-,-,-,-,-,-, 635586 Satellite W-chromosome 585 chrUn_NT_466138v1 5088 10649 GGXHOI 588 - 5088 10649 0 10 406,92,148,414,148,457,416,147,299,149, 0,742,886,1591,2016,2838,3853,4280,5102,5412, -,-,-,-,-,-,-,-,-,-, 635591 Satellite W-chromosome 585 chrUn_NT_466138v1 11374 12914 GGXHOI 597 - 11374 12914 0 3 407,299,148, 0,1082,1392, -,-,-, 635598 Satellite W-chromosome 585 chrUn_NT_466138v1 14772 16133 GGXHOI 604 - 14772 16133 0 2 406,283, 0,1078, -,-, 635603 Satellite W-chromosome 585 chrUn_NT_466139v1 1203 2438 CR1-E 685 + 1203 2438 0 3 47,67,67, 0,1060,1168, +,+,+, 635615 LINE CR1 585 chrUn_NT_466139v1 2563 2734 CR1-H2 583 + 2563 2734 0 2 63,67, 0,104, +,+, 635635 LINE CR1 585 chrUn_NT_466139v1 2725 3293 CR1-C2 627 + 2725 3293 0 5 55,67,124,67,48, 0,202,286,453,520, +,+,+,+,+, 635637 LINE CR1 585 chrUn_NT_466139v1 2823 2944 CR1-C2 648 + 2823 2944 0 2 63,58, 0,63, +,+, 635639 LINE CR1 585 chrUn_NT_466139v1 3288 3750 CR1-C2 710 + 3288 3750 0 7 55,54,52,52,56,63,49, 0,55,109,161,213,350,413, +,+,+,+,+,+,+, 635643 LINE CR1 585 chrUn_NT_466139v1 4262 4357 CR1-E 607 + 4262 4357 0 2 52,43, 0,52, +,+, 635646 LINE CR1 585 chrUn_NT_466139v1 11460 13895 CR1-Y2 421 + 11460 13895 0 3 84,275,67, 0,2064,2368, +,+,+, 635655 LINE CR1 585 chrUn_NT_466139v1 12007 12197 CR1-E 517 - 12007 12197 0 2 60,52, 0,138, -,-, 635657 LINE CR1 585 chrUn_NT_466139v1 12518 12619 CR1-E 600 - 12518 12619 0 2 52,49, 0,52, -,-, 635659 LINE CR1 585 chrUn_NT_466139v1 12935 13036 CR1-E 600 - 12935 13036 0 2 52,49, 0,52, -,-, 635660 LINE CR1 585 chrUn_NT_466139v1 14258 14415 CR1-Y2 400 + 14258 14415 0 2 94,63, 0,94, +,+, 635667 LINE CR1 585 chrUn_NT_466139v1 14615 14824 CR1-Y2 557 + 14615 14824 0 3 89,60,60, 0,89,149, +,+,+, 635672 LINE CR1 585 chrUn_NT_466139v1 14812 15131 CR1-Y2 538 + 14812 15131 0 2 135,184, 0,135, +,+, 635673 LINE CR1 585 chrUn_NT_466139v1 15137 15437 CR1-Y2 596 + 15137 15437 0 2 54,246, 0,54, +,+, 635674 LINE CR1 585 chrUn_NT_466139v1 15191 15775 CR1-Y4 377 + 15191 15775 0 2 26,364, 0,220, +,+, 635675 LINE CR1 585 chrUn_NT_466140v1 15282 16026 GGXHOI 412 - 15282 16026 0 2 414,313, 0,431, -,-, 635678 Satellite W-chromosome 585 chrUn_NT_466142v1 861 1975 CR1-B2 705 - 861 1975 0 2 888,223, 0,891, -,-, 635726 LINE CR1 585 chrUn_NT_466142v1 8017 8587 CR1-X 430 + 8017 8587 0 3 171,135,221, 0,171,349, +,+,+, 635730 LINE CR1 585 chrUn_NT_466143v1 1868 2247 (CAAGG)n 569 + 1868 2247 0 2 176,203, 0,176, +,+, 635739 Simple_repeat Simple_repeat 585 chrUn_NT_466143v1 3740 4451 (CAAGG)n 610 + 3740 4451 0 3 180,161,190, 0,180,521, +,+,+, 635748 Simple_repeat Simple_repeat 585 chrUn_NT_466144v1 1310 1450 GA-rich 298 + 1310 1450 0 2 28,41, 0,99, +,+, 635764 Low_complexity Low_complexity 585 chrUn_NT_466144v1 4337 4481 GA-rich 292 + 4337 4481 0 2 43,44, 0,100, +,+, 635771 Low_complexity Low_complexity 585 chrUn_NT_466144v1 13577 13722 GA-rich 300 + 13577 13722 0 2 43,45, 0,100, +,+, 635790 Low_complexity Low_complexity 585 chrUn_NT_466144v1 15098 15243 GA-rich 300 + 15098 15243 0 2 43,45, 0,100, +,+, 635793 Low_complexity Low_complexity 585 chrUn_NT_466145v1 2100 3798 GGXHOI 406 + 2100 3798 0 2 448,1235, 0,463, +,+, 635800 Satellite W-chromosome 585 chrUn_NT_466145v1 4134 5875 GGXHOI 381 + 4134 5875 0 4 176,246,728,517, 0,188,449,1224, +,+,+,+, 635801 Satellite W-chromosome 585 chrUn_NT_466145v1 7071 10533 GGXHOI 381 + 7071 10533 0 3 353,742,2319, 0,365,1143, +,+,+, 635803 Satellite W-chromosome 585 chrUn_NT_466145v1 10601 12407 GGXHOI 369 + 10601 12407 0 4 127,143,710,736, 0,181,344,1070, +,+,+,+, 635804 Satellite W-chromosome 585 chrUn_NT_466145v1 14631 16032 GGXHOI 422 + 14631 16032 0 2 706,681, 0,720, +,+, 635807 Satellite W-chromosome 585 chrUn_NT_466146v1 1194 1587 GGXHOI 326 + 1194 1587 0 2 155,207, 0,186, +,+, 635810 Satellite W-chromosome 585 chrUn_NT_466146v1 1776 2616 GGXHOI 468 + 1776 2616 0 2 751,69, 0,771, +,+, 635811 Satellite W-chromosome 585 chrUn_NT_466146v1 2716 14326 GGXHOI 441 + 2716 14326 0 15 858,1519,1480,64,436,987,1480,64,1434,519,614,292,64,436,978, 0,873,2407,3944,4028,4477,5479,7016,7100,8549,9081,9737,10086,10170,10632, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 635812 Satellite W-chromosome 585 chrUn_NT_466146v1 15487 16077 GGXHOI 349 + 15487 16077 0 3 142,160,233, 0,185,357, +,+,+, 635815 Satellite W-chromosome 585 chrUn_NT_466147v1 9808 9902 (TCCCACC)n 336 + 9808 9902 0 2 42,16, 0,78, +,+, 635824 Simple_repeat Simple_repeat 585 chrUn_NT_466148v1 3919 4545 CR1-H 690 + 3919 4545 0 2 468,139, 0,487, +,+, 635834 LINE CR1 585 chrUn_NT_466149v1 1914 3838 GGLTR7-int 664 - 1914 3838 0 4 33,74,657,529, 0,34,738,1395, -,-,-,-, 635849 LTR ERV1 585 chrUn_NT_466150v1 3518 4009 GGLTR3F2 844 + 3518 4009 0 2 391,75, 0,416, +,+, 635863 LTR ERVL 585 chrUn_NT_466150v1 9251 9620 GGERVK10-int 303 - 9251 9620 0 2 81,140, 0,229, -,-, 635868 LTR ERVK 585 chrUn_NT_466151v1 1267 9162 GGXHOI 404 + 1267 9162 0 4 330,2720,2644,2146, 0,345,3085,5749, +,+,+,+, 635876 Satellite W-chromosome 585 chrUn_NT_466151v1 9247 12767 GGXHOI 389 + 9247 12767 0 3 413,2546,527, 0,433,2993, +,+,+, 635877 Satellite W-chromosome 585 chrUn_NT_466151v1 12838 14429 GGXHOI 365 + 12838 14429 0 2 662,905, 0,686, +,+, 635878 Satellite W-chromosome 585 chrUn_NT_466151v1 14514 15655 GGXHOI 396 + 14514 15655 0 2 286,797, 0,344, +,+, 635879 Satellite W-chromosome 585 chrUn_NT_466152v1 10242 13353 GGLTR7-int 397 - 10242 13353 0 4 277,937,1640,116, 0,324,1355,2995, -,-,-,-, 635897 LTR ERV1 585 chrUn_NT_466153v1 5778 8451 GGLTR7-int 515 - 5778 8451 0 3 833,1627,118, 0,928,2555, -,-,-, 635901 LTR ERV1 585 chrUn_NT_466155v1 5629 8715 GGLTR7-int 430 - 5629 8715 0 4 277,948,1603,88, 0,324,1367,2998, -,-,-,-, 635916 LTR ERV1 585 chrUn_NT_466156v1 1129 2532 GGXHOI 348 - 1129 2532 0 2 1084,256, 0,1147, -,-, 635926 Satellite W-chromosome 585 chrUn_NT_466156v1 2631 4828 GGXHOI 379 - 2631 4828 0 3 516,1081,474, 0,579,1723, -,-,-, 635927 Satellite W-chromosome 585 chrUn_NT_466156v1 5505 6361 GGXHOI 371 - 5505 6361 0 2 144,677, 0,179, -,-, 635929 Satellite W-chromosome 585 chrUn_NT_466156v1 8133 9184 GGXHOI 378 - 8133 9184 0 2 516,472, 0,579, -,-, 635933 Satellite W-chromosome 585 chrUn_NT_466156v1 9861 11138 GGXHOI 342 - 9861 11138 0 3 633,221,354, 0,650,923, -,-,-, 635935 Satellite W-chromosome 585 chrUn_NT_466156v1 12879 14491 GGXHOI 371 - 12879 14491 0 2 506,1043, 0,569, -,-, 635939 Satellite W-chromosome 585 chrUn_NT_466157v1 9470 10643 GGXHOI 333 - 9470 10643 0 3 754,289,93, 0,777,1080, -,-,-, 635943 Satellite W-chromosome 585 chrUn_NT_466157v1 10956 13343 GGXHOI 362 - 10956 13343 0 2 2144,226, 0,2161, -,-, 635945 Satellite W-chromosome 585 chrUn_NT_466157v1 13424 16083 GGXHOI 358 - 13424 16083 0 4 909,1272,270,130, 0,956,2243,2529, -,-,-,-, 635946 Satellite W-chromosome 585 chrUn_NT_466158v1 6570 8265 GGXHOI 306 - 6570 8265 0 5 186,723,37,435,162, 0,213,996,1059,1533, -,-,-,-,-, 635952 Satellite W-chromosome 585 chrUn_NT_466158v1 8397 9069 GGXHOI 368 - 8397 9069 0 3 168,283,146, 0,217,526, -,-,-, 635954 Satellite W-chromosome 585 chrUn_NT_466158v1 9379 11155 GGXHOI 341 - 9379 11155 0 2 1195,527, 0,1249, -,-, 635956 Satellite W-chromosome 585 chrUn_NT_466158v1 12488 16064 GGXHOI 339 - 12488 16064 0 2 793,2767, 0,809, -,-, 635959 Satellite W-chromosome 585 chrUn_NT_466160v1 4148 4768 CR1-H 651 - 4148 4768 0 2 139,475, 0,145, -,-, 635964 LINE CR1 585 chrUn_NT_466160v1 6962 8226 CR1-H 586 - 6962 8226 0 2 117,1147, 0,117, -,-, 635968 LINE CR1 585 chrUn_NT_466161v1 2740 3226 GGLTR4A 562 + 2740 3226 0 2 256,97, 0,389, +,+, 635979 LTR ERVL 585 chrUn_NT_466161v1 3230 4039 CR1-C2 499 - 3230 4039 0 3 416,338,52, 0,416,757, -,-,-, 635981 LINE CR1 585 chrUn_NT_466161v1 9523 10918 CR1-Y 196 - 9523 10918 0 2 529,767, 0,628, -,-, 635984 LINE CR1 585 chrUn_NT_466162v1 3110 4975 GGXHOI 420 + 3110 4975 0 3 413,936,478, 0,433,1387, +,+,+, 635988 Satellite W-chromosome 585 chrUn_NT_466162v1 6068 8936 GGXHOI 394 + 6068 8936 0 4 924,542,918,424, 0,949,1507,2444, +,+,+,+, 635990 Satellite W-chromosome 585 chrUn_NT_466162v1 9062 14103 GGXHOI 408 + 9062 14103 0 7 441,525,439,994,449,1453,551, 0,498,1040,1499,2513,3018,4490, +,+,+,+,+,+,+, 635991 Satellite W-chromosome 585 chrUn_NT_466163v1 1652 1747 CR1-E 628 - 1652 1747 0 2 52,43, 0,52, -,-, 636003 LINE CR1 585 chrUn_NT_466163v1 15039 15193 CR1-Y2 548 - 15039 15193 0 2 87,67, 0,87, -,-, 636029 LINE CR1 585 chrUn_NT_466164v1 2536 3583 GGXHOI 392 + 2536 3583 0 2 470,516, 0,531, +,+, 636041 Satellite W-chromosome 585 chrUn_NT_466164v1 3682 4410 GGXHOI 389 + 3682 4410 0 2 472,193, 0,535, +,+, 636042 Satellite W-chromosome 585 chrUn_NT_466164v1 4530 6231 GGXHOI 380 + 4530 6231 0 2 632,1006, 0,695, +,+, 636043 Satellite W-chromosome 585 chrUn_NT_466164v1 6371 9736 GGXHOI 383 + 6371 9736 0 3 1085,1071,1083, 0,1148,2282, +,+,+, 636044 Satellite W-chromosome 585 chrUn_NT_466164v1 13272 15374 GGXHOI 378 + 13272 15374 0 2 1082,963, 0,1139, +,+, 636050 Satellite W-chromosome 585 chrUn_NT_466166v1 1909 3446 GGXHOI 365 + 1909 3446 0 4 157,710,261,299, 0,205,937,1238, +,+,+,+, 636059 Satellite W-chromosome 585 chrUn_NT_466166v1 3525 5102 GGXHOI 248 + 3525 5102 0 4 168,622,139,550, 0,218,873,1027, +,+,+,+, 636060 Satellite W-chromosome 585 chrUn_NT_466166v1 5225 6535 GGXHOI 352 + 5225 6535 0 4 286,627,116,222, 0,299,943,1088, +,+,+,+, 636061 Satellite W-chromosome 585 chrUn_NT_466166v1 6757 7605 GGXHOI 346 + 6757 7605 0 2 179,635, 0,213, +,+, 636062 Satellite W-chromosome 585 chrUn_NT_466166v1 8751 9784 GGXHOI 451 + 8751 9784 0 2 234,753, 0,280, +,+, 636064 Satellite W-chromosome 585 chrUn_NT_466166v1 9920 13914 GGXHOI 424 + 9920 13914 0 2 3169,809, 0,3185, +,+, 636065 Satellite W-chromosome 585 chrUn_NT_466166v1 14228 16036 GGXHOI 324 + 14228 16036 0 3 210,528,1044, 0,222,764, +,+,+, 636066 Satellite W-chromosome 585 chrUn_NT_466167v1 1406 2591 GGXHOI 374 + 1406 2591 0 4 292,154,305,388, 0,309,478,797, +,+,+,+, 636070 Satellite W-chromosome 585 chrUn_NT_466167v1 3693 4481 GGXHOI 409 + 3693 4481 0 2 418,353, 0,435, +,+, 636072 Satellite W-chromosome 585 chrUn_NT_466167v1 5780 6909 GGXHOI 392 + 5780 6909 0 2 747,362, 0,767, +,+, 636074 Satellite W-chromosome 585 chrUn_NT_466167v1 7195 8469 GGXHOI 260 + 7195 8469 0 2 1052,163, 0,1111, +,+, 636075 Satellite W-chromosome 585 chrUn_NT_466167v1 9146 10857 GGXHOI 384 + 9146 10857 0 2 1207,484, 0,1227, +,+, 636077 Satellite W-chromosome 585 chrUn_NT_466167v1 11025 12787 GGXHOI 400 + 11025 12787 0 3 460,937,247, 0,520,1515, +,+,+, 636078 Satellite W-chromosome 585 chrUn_NT_466167v1 13344 15087 GGXHOI 396 + 13344 15087 0 3 460,940,265, 0,517,1478, +,+,+, 636080 Satellite W-chromosome 585 chrUn_NT_466168v1 1730 2923 GGXHOI 373 - 1730 2923 0 4 145,228,459,296, 0,156,398,897, -,-,-,-, 636083 Satellite W-chromosome 585 chrUn_NT_466168v1 3871 4268 GGXHOI 319 - 3871 4268 0 2 161,194, 0,203, -,-, 636085 Satellite W-chromosome 585 chrUn_NT_466168v1 8767 12206 GGXHOI 389 - 8767 12206 0 6 305,466,294,923,342,975, 0,330,815,1145,2110,2464, -,-,-,-,-,-, 636093 Satellite W-chromosome 585 chrUn_NT_466168v1 12293 13221 GGXHOI 364 - 12293 13221 0 2 361,517, 0,411, -,-, 636094 Satellite W-chromosome 585 chrUn_NT_466169v1 3982 4318 (CAGG)n 448 + 3982 4318 0 2 126,38, 0,298, +,+, 636107 Simple_repeat Simple_repeat 585 chrUn_NT_466169v1 13526 14809 (ACCCATTGGG)n 573 - 13526 14809 0 4 185,734,172,151, 0,213,960,1132, -,-,-,-, 636119 Satellite Satellite 585 chrUn_NT_466169v1 15324 16034 (ACCCATTGGG)n 553 + 15324 16034 0 2 484,226, 0,484, +,+, 636123 Satellite Satellite 585 chrUn_NT_466170v1 423 1436 GGXHOI 381 + 423 1436 0 2 428,542, 0,471, +,+, 636125 Satellite W-chromosome 585 chrUn_NT_466170v1 2401 3954 GGXHOI 344 + 2401 3954 0 2 1003,537, 0,1016, +,+, 636127 Satellite W-chromosome 585 chrUn_NT_466170v1 9956 11500 GGXHOI 387 + 9956 11500 0 2 472,1009, 0,535, +,+, 636135 Satellite W-chromosome 585 chrUn_NT_466171v1 6073 7500 GGXHOI 371 - 6073 7500 0 3 682,273,395, 0,742,1032, -,-,-, 636148 Satellite W-chromosome 585 chrUn_NT_466171v1 9604 10648 GGXHOI 358 - 9604 10648 0 2 471,516, 0,528, -,-, 636151 Satellite W-chromosome 585 chrUn_NT_466171v1 12417 13209 GGXHOI 339 - 12417 13209 0 2 624,152, 0,640, -,-, 636154 Satellite W-chromosome 585 chrUn_NT_466172v1 7316 9680 GGXHOI 535 + 7316 9680 0 4 281,486,334,957, 0,339,887,1407, +,+,+,+, 636164 Satellite W-chromosome 585 chrUn_NT_466172v1 11831 13371 GGXHOI 565 + 11831 13371 0 3 158,804,463, 0,210,1077, +,+,+, 636168 Satellite W-chromosome 585 chrUn_NT_466172v1 13685 15379 GGXHOI 524 + 13685 15379 0 2 106,1387, 0,307, +,+, 636170 Satellite W-chromosome 585 chrUn_NT_466173v1 9559 10685 CR1-D 689 - 9559 10685 0 2 792,315, 0,811, -,-, 636177 LINE CR1 585 chrUn_NT_466174v1 210 4194 GGXHOI 393 + 210 4194 0 4 290,1924,873,799, 0,344,2289,3185, +,+,+,+, 636183 Satellite W-chromosome 585 chrUn_NT_466174v1 4293 10044 GGXHOI 419 + 4293 10044 0 6 1135,388,2251,1503,141,213, 0,1155,1564,3836,5382,5538, +,+,+,+,+,+, 636184 Satellite W-chromosome 585 chrUn_NT_466174v1 12256 13809 GGXHOI 354 + 12256 13809 0 4 487,140,256,580, 0,534,697,973, +,+,+,+, 636187 Satellite W-chromosome 585 chrUn_NT_466174v1 13942 14244 GGXHOI 366 + 13942 14244 0 2 108,150, 0,152, +,+, 636188 Satellite W-chromosome 585 chrUn_NT_466174v1 14330 15659 GGXHOI 329 + 14330 15659 0 2 491,795, 0,534, +,+, 636190 Satellite W-chromosome 585 chrUn_NT_466175v1 3970 4035 (C)n 841 + 3970 4035 0 2 26,28, 0,37, +,+, 636194 Simple_repeat Simple_repeat 585 chrUn_NT_466176v1 2225 5525 GGXHOI 381 - 2225 5525 0 4 504,604,328,1790, 0,547,1162,1510, -,-,-,-, 636201 Satellite W-chromosome 585 chrUn_NT_466176v1 5619 6319 GGXHOI 367 - 5619 6319 0 2 149,520, 0,180, -,-, 636202 Satellite W-chromosome 585 chrUn_NT_466176v1 6440 9337 GGXHOI 375 - 6440 9337 0 2 935,1944, 0,953, -,-, 636203 Satellite W-chromosome 585 chrUn_NT_466176v1 9404 15936 GGXHOI 401 - 9404 15936 0 3 677,3639,2169, 0,707,4363, -,-,-, 636204 Satellite W-chromosome 585 chrUn_NT_466177v1 4422 5044 CR1-H 677 - 4422 5044 0 2 138,478, 0,144, -,-, 636207 LINE CR1 585 chrUn_NT_466177v1 7034 8390 CR1-H 678 - 7034 8390 0 2 117,1239, 0,117, -,-, 636212 LINE CR1 585 chrUn_NT_466177v1 13349 13486 (TTTGC)n 298 + 13349 13486 0 2 79,9, 0,128, +,+, 636215 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 1254 1950 (CGAGG)n 491 + 1254 1950 0 2 491,192, 0,504, +,+, 636240 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 3557 4025 (CGAGG)n 512 + 3557 4025 0 2 184,262, 0,206, +,+, 636247 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 5971 6351 (CGAGG)n 516 + 5971 6351 0 2 175,185, 0,195, +,+, 636255 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 7113 7637 (CGAGG)n 514 + 7113 7637 0 2 176,328, 0,196, +,+, 636257 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 7696 8600 (CGAGG)n 482 + 7696 8600 0 2 563,323, 0,581, +,+, 636259 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 10192 12592 (CGAGG)n 527 + 10192 12592 0 7 290,121,124,674,510,173,177, 0,320,616,774,1468,1993,2223, +,+,+,+,+,+,+, 636264 Simple_repeat Simple_repeat 585 chrUn_NT_466179v1 13377 14735 (CGAGG)n 490 + 13377 14735 0 3 369,715,183, 0,399,1175, +,+,+, 636269 Simple_repeat Simple_repeat 585 chrUn_NT_466180v1 3055 6899 GGXHOI 395 - 3055 6899 0 6 133,132,2110,576,372,451, 0,146,290,2416,3004,3393, -,-,-,-,-,-, 636277 Satellite W-chromosome 585 chrUn_NT_466180v1 7476 9102 GGXHOI 368 - 7476 9102 0 3 730,691,135, 0,761,1491, -,-,-, 636279 Satellite W-chromosome 585 chrUn_NT_466180v1 9423 11562 GGXHOI 413 - 9423 11562 0 4 142,291,372,1267, 0,153,489,872, -,-,-,-, 636281 Satellite W-chromosome 585 chrUn_NT_466180v1 11643 13105 GGXHOI 336 - 11643 13105 0 5 243,137,430,138,355, 0,282,434,913,1107, -,-,-,-,-, 636282 Satellite W-chromosome 585 chrUn_NT_466180v1 13760 14163 GGXHOI 388 - 13760 14163 0 2 211,177, 0,226, -,-, 636284 Satellite W-chromosome 585 chrUn_NT_466180v1 14230 15853 GGXHOI 391 - 14230 15853 0 3 185,94,1230, 0,239,393, -,-,-, 636285 Satellite W-chromosome 585 chrUn_NT_466181v1 463 1741 GGXHOI 359 - 463 1741 0 2 707,536, 0,742, -,-, 636287 Satellite W-chromosome 585 chrUn_NT_466181v1 3595 5139 GGXHOI 376 - 3595 5139 0 2 1009,472, 0,1072, -,-, 636290 Satellite W-chromosome 585 chrUn_NT_466181v1 5238 6287 GGXHOI 375 - 5238 6287 0 2 514,472, 0,577, -,-, 636291 Satellite W-chromosome 585 chrUn_NT_466181v1 8188 9994 GGXHOI 333 - 8188 9994 0 3 555,216,970, 0,572,836, -,-,-, 636295 Satellite W-chromosome 585 chrUn_NT_466181v1 10093 12204 GGXHOI 382 - 10093 12204 0 2 1003,1046, 0,1065, -,-, 636296 Satellite W-chromosome 585 chrUn_NT_466183v1 1123 1895 (CCTCG)n 542 + 1123 1895 0 2 570,25, 0,747, +,+, 636310 Simple_repeat Simple_repeat 585 chrUn_NT_466183v1 1892 4311 GGERV10_LTR 874 + 1892 4311 0 2 41,38, 0,2381, +,+, 636312 LTR ERVL 585 chrUn_NT_466183v1 1934 4145 GGLTR10D-int 922 + 1934 4145 0 2 1844,364, 0,1847, +,+, 636313 LTR ERVK 585 chrUn_NT_466183v1 4323 6772 GGLTR7-int 604 - 4323 6772 0 2 793,336, 0,2113, -,-, 636314 LTR ERV1 585 chrUn_NT_466184v1 12662 15982 GGXHOI 364 - 12662 15982 0 3 828,437,1974, 0,890,1346, -,-,-, 636331 Satellite W-chromosome 585 chrUn_NT_466186v1 10092 14796 CR1-D2 567 - 10092 14796 0 2 572,811, 0,3893, -,-, 636338 LINE CR1 585 chrUn_NT_466186v1 11358 14002 CR1-D 663 - 11358 14002 0 2 1646,998, 0,1646, -,-, 636339 LINE CR1 585 chrUn_NT_466186v1 14786 15032 Char12Mar1_GG 518 - 14786 15032 0 2 72,174, 0,72, -,-, 636340 DNA hAT-Charlie 585 chrUn_NT_466187v1 8768 9006 A-rich 383 + 8768 9006 0 2 126,68, 0,170, +,+, 636350 Low_complexity Low_complexity 585 chrUn_NT_466187v1 13368 14681 GGXHOI 394 + 13368 14681 0 3 207,780,257, 0,254,1056, +,+,+, 636355 Satellite W-chromosome 585 chrUn_NT_466187v1 14753 15937 GGXHOI 475 + 14753 15937 0 2 418,752, 0,432, +,+, 636356 Satellite W-chromosome 585 chrUn_NT_466188v1 4893 5193 GGLTR3E1 740 + 4893 5193 0 2 179,121, 0,179, +,+, 636361 LTR ERVL 585 chrUn_NT_466188v1 10502 11291 CR1-F 267 + 10502 11291 0 2 215,560, 0,229, +,+, 636367 LINE CR1 585 chrUn_NT_466189v1 2216 2570 GGXHOI 387 - 2216 2570 0 2 113,226, 0,128, -,-, 636371 Satellite W-chromosome 585 chrUn_NT_466189v1 3982 11377 GGXHOI 387 - 3982 11377 0 10 138,946,904,780,540,981,1774,227,435,457, 0,178,1144,2092,2886,3446,4442,6240,6489,6938, -,-,-,-,-,-,-,-,-,-, 636374 Satellite W-chromosome 585 chrUn_NT_466189v1 11637 13125 GGXHOI 405 - 11637 13125 0 3 111,982,325, 0,137,1163, -,-,-, 636375 Satellite W-chromosome 585 chrUn_NT_466189v1 13640 15961 GGXHOI 386 - 13640 15961 0 2 384,1893, 0,428, -,-, 636376 Satellite W-chromosome 585 chrUn_NT_466190v1 3315 10029 GGXHOI 358 - 3315 10029 0 8 868,465,1225,2533,439,254,661,138, 0,884,1375,2622,5171,5626,5897,6576, -,-,-,-,-,-,-,-, 636378 Satellite W-chromosome 585 chrUn_NT_466190v1 10100 15963 GGXHOI 376 - 10100 15963 0 7 1306,149,449,1208,288,66,2252, 0,1323,1489,1981,3205,3528,3611, -,-,-,-,-,-,-, 636379 Satellite W-chromosome 585 chrUn_NT_466192v1 7712 8863 GGXHOI 362 - 7712 8863 0 2 133,1005, 0,146, -,-, 636403 Satellite W-chromosome 585 chrUn_NT_466192v1 9020 15954 GGXHOI 340 - 9020 15954 0 9 92,2032,131,150,1696,1261,167,704,547, 0,103,2148,2335,2501,4210,5483,5667,6387, -,-,-,-,-,-,-,-,-, 636404 Satellite W-chromosome 585 chrUn_NT_466196v1 3010 4344 GGERVL-A-int 792 - 3010 4344 0 2 1278,56, 0,1278, -,-, 636419 LTR ERVL 585 chrUn_NT_466196v1 4581 5466 (CCCCATTGGG)n 449 + 4581 5466 0 5 228,180,119,129,119, 0,262,464,615,766, +,+,+,+,+, 636421 Satellite Satellite 585 chrUn_NT_466196v1 5606 6219 (CCCCATTGGG)n 466 + 5606 6219 0 2 471,142, 0,471, +,+, 636423 Satellite Satellite 585 chrUn_NT_466197v1 2776 4317 GGXHOI 383 + 2776 4317 0 2 472,1006, 0,535, +,+, 636433 Satellite W-chromosome 585 chrUn_NT_466199v1 439 5762 GGXHOI 415 + 439 5762 0 7 613,825,445,394,945,475,1414, 0,656,1525,2017,2428,3390,3909, +,+,+,+,+,+,+, 636499 Satellite W-chromosome 585 chrUn_NT_466199v1 5839 10755 GGXHOI 377 + 5839 10755 0 6 441,456,1448,396,1835,229, 0,461,933,2425,2837,4687, +,+,+,+,+,+, 636500 Satellite W-chromosome 585 chrUn_NT_466199v1 11913 13649 GGXHOI 298 + 11913 13649 0 3 252,914,512, 0,268,1224, +,+,+, 636501 Satellite W-chromosome 585 chrUn_NT_466199v1 13912 14332 GGXHOI 463 + 13912 14332 0 2 261,142, 0,278, +,+, 636502 Satellite W-chromosome 585 chrUn_NT_466201v1 3335 3496 G-rich 350 + 3335 3496 0 2 91,43, 0,118, +,+, 636508 Low_complexity Low_complexity 585 chrUn_NT_466201v1 3983 6442 GGLTR7-int 589 + 3983 6442 0 2 341,794, 0,1665, +,+, 636510 LTR ERV1 585 chrUn_NT_466201v1 6454 8885 GGERV10_LTR 848 - 6454 8885 0 2 38,41, 0,2390, -,-, 636513 LTR ERVL 585 chrUn_NT_466201v1 6623 8843 GGLTR10D-int 900 - 6623 8843 0 2 367,1850, 0,370, -,-, 636514 LTR ERVK 585 chrUn_NT_466201v1 8896 9289 (CGAGG)n 643 + 8896 9289 0 2 181,179, 0,214, +,+, 636515 Simple_repeat Simple_repeat 585 chrUn_NT_466201v1 9405 11297 (CGAGG)n 555 + 9405 11297 0 7 323,119,65,426,177,328,176, 0,335,633,727,1164,1352,1716, +,+,+,+,+,+,+, 636517 Simple_repeat Simple_repeat 585 chrUn_NT_466201v1 11620 12334 (CGAGG)n 507 + 11620 12334 0 2 357,325, 0,389, +,+, 636521 Simple_repeat Simple_repeat 585 chrUn_NT_466202v1 1434 2316 GGXHOI 383 + 1434 2316 0 2 470,392, 0,490, +,+, 636541 Satellite W-chromosome 585 chrUn_NT_466202v1 2602 8421 GGXHOI 397 + 2602 8421 0 10 369,486,352,1443,272,357,694,347,682,642, 0,387,896,1263,2736,3031,3403,4112,4474,5177, +,+,+,+,+,+,+,+,+,+, 636542 Satellite W-chromosome 585 chrUn_NT_466202v1 8604 10084 GGXHOI 433 + 8604 10084 0 4 272,439,356,359, 0,291,750,1121, +,+,+,+, 636543 Satellite W-chromosome 585 chrUn_NT_466202v1 10184 15715 GGXHOI 411 + 10184 15715 0 13 234,481,354,726,438,396,607,422,319,313,357,474,154, 0,249,750,1119,1864,2322,2737,3362,3803,4179,4511,4883,5377, +,+,+,+,+,+,+,+,+,+,+,+,+, 636544 Satellite W-chromosome 585 chrUn_NT_466205v1 3212 4263 GGXHOI 392 + 3212 4263 0 2 472,516, 0,535, +,+, 636565 Satellite W-chromosome 585 chrUn_NT_466205v1 5512 6563 GGXHOI 392 + 5512 6563 0 2 472,516, 0,535, +,+, 636568 Satellite W-chromosome 585 chrUn_NT_466205v1 9530 10629 GGXHOI 321 + 9530 10629 0 2 958,86, 0,1013, +,+, 636572 Satellite W-chromosome 585 chrUn_NT_466205v1 12590 13666 GGXHOI 356 + 12590 13666 0 2 448,608, 0,468, +,+, 636576 Satellite W-chromosome 585 chrUn_NT_466206v1 9463 13433 GGXHOI 360 + 9463 13433 0 10 137,187,199,643,223,469,1270,220,296,131, 0,163,367,578,1259,1497,1998,3291,3526,3839, +,+,+,+,+,+,+,+,+,+, 636591 Satellite W-chromosome 585 chrUn_NT_466206v1 13508 14360 GGXHOI 291 + 13508 14360 0 4 221,300,115,169, 0,233,553,683, +,+,+,+, 636592 Satellite W-chromosome 585 chrUn_NT_466206v1 14445 14871 GGXHOI 393 + 14445 14871 0 2 141,267, 0,159, +,+, 636593 Satellite W-chromosome 585 chrUn_NT_466206v1 15521 15916 GGXHOI 392 + 15521 15916 0 3 125,70,150, 0,148,245, +,+,+, 636595 Satellite W-chromosome 585 chrUn_NT_466207v1 1547 1890 (TCCA)n 419 + 1547 1890 0 2 179,123, 0,220, +,+, 636599 Simple_repeat Simple_repeat 585 chrUn_NT_466207v1 1955 2554 (TCCA)n 469 + 1955 2554 0 3 79,235,247, 0,104,352, +,+,+, 636601 Simple_repeat Simple_repeat 585 chrUn_NT_466211v1 3459 3660 Char12Mar1_GG 602 - 3459 3660 0 2 73,128, 0,73, -,-, 636645 DNA hAT-Charlie 585 chrUn_NT_466212v1 524 3598 CR1-F 489 - 524 3598 0 8 186,202,200,153,204,204,203,202, 0,479,966,1460,1880,2126,2371,2872, -,-,-,-,-,-,-,-, 636652 LINE CR1 585 chrUn_NT_466212v1 3640 4048 CR1-F 738 - 3640 4048 0 2 188,175, 0,233, -,-, 636658 LINE CR1 585 chrUn_NT_466212v1 4092 10925 CR1-F 525 - 4092 10925 0 18 181,201,155,204,204,203,200,199,155,204,204,203,200,201,155,204,204,203, 0,457,948,1370,1616,1862,2365,2842,3331,3753,3999,4245,4748,5226,5717,6138,6384,6630, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 636659 LINE CR1 585 chrUn_NT_466212v1 10968 13557 CR1-F 536 - 10968 13557 0 8 210,198,155,204,204,203,198,191, 0,255,742,1164,1410,1656,2158,2398, -,-,-,-,-,-,-,-, 636671 LINE CR1 585 chrUn_NT_466212v1 13601 15661 CR1-F 539 - 13601 15661 0 7 51,199,155,204,203,203,196, 0,204,448,871,1117,1362,1864, -,-,-,-,-,-,-, 636675 LINE CR1 585 chrUn_NT_466213v1 100 233 GA-rich 364 + 100 233 0 2 43,33, 0,100, +,+, 636680 Low_complexity Low_complexity 585 chrUn_NT_466213v1 1638 1781 GA-rich 216 + 1638 1781 0 2 42,67, 0,76, +,+, 636685 Low_complexity Low_complexity 585 chrUn_NT_466213v1 1800 2198 A-rich 581 + 1800 2198 0 2 325,38, 0,360, +,+, 636687 Low_complexity Low_complexity 585 chrUn_NT_466213v1 13741 13873 GA-rich 342 + 13741 13873 0 2 42,33, 0,99, +,+, 636728 Low_complexity Low_complexity 585 chrUn_NT_466214v1 3134 4572 GGXHOI 528 - 3134 4572 0 2 1014,206, 0,1232, -,-, 636738 Satellite W-chromosome 585 chrUn_NT_466214v1 6162 8500 GGXHOI 531 - 6162 8500 0 3 878,933,283, 0,927,2055, -,-,-, 636741 Satellite W-chromosome 585 chrUn_NT_466214v1 14464 15883 GGXHOI 510 - 14464 15883 0 2 139,1085, 0,334, -,-, 636748 Satellite W-chromosome 585 chrUn_NT_466215v1 14264 15895 GGLTR7-int 549 - 14264 15895 0 2 267,1290, 0,341, -,-, 636766 LTR ERV1 585 chrUn_NT_466216v1 5346 9839 GGXHOI 359 - 5346 9839 0 6 141,1420,219,221,2244,135, 0,163,1606,1843,2082,4358, -,-,-,-,-,-, 636768 Satellite W-chromosome 585 chrUn_NT_466216v1 9987 15226 GGXHOI 372 - 9987 15226 0 6 1592,425,138,1107,880,997, 0,1604,2044,2208,3345,4242, -,-,-,-,-,-, 636769 Satellite W-chromosome 585 chrUn_NT_466217v1 237 4371 GGXHOI 545 - 237 4371 0 6 722,1214,158,83,203,14, 0,973,2230,2950,3071,4120, -,-,-,-,-,-, 636773 Satellite W-chromosome 585 chrUn_NT_466217v1 4468 13667 GGXHOI 567 - 4468 13667 0 8 245,49,279,445,123,596,116,392, 0,1183,1275,4000,5275,7120,7753,8807, -,-,-,-,-,-,-,-, 636776 Satellite W-chromosome 585 chrUn_NT_466218v1 6644 7356 GGXHOI 366 - 6644 7356 0 2 386,303, 0,409, -,-, 636787 Satellite W-chromosome 585 chrUn_NT_466218v1 10042 11076 GGXHOI 330 - 10042 11076 0 2 730,288, 0,746, -,-, 636791 Satellite W-chromosome 585 chrUn_NT_466218v1 11425 15304 GGXHOI 363 - 11425 15304 0 4 866,1124,142,1581, 0,929,2097,2298, -,-,-,-, 636792 Satellite W-chromosome 585 chrUn_NT_466219v1 10135 11146 CR1-B2 704 + 10135 11146 0 2 225,783, 0,228, +,+, 636801 LINE CR1 585 chrUn_NT_466220v1 2038 2374 GGCAN 843 + 2038 2374 0 2 213,83, 0,253, +,+, 636811 Unknown Unknown 585 chrUn_NT_466220v1 12360 15090 CR1-Y 466 + 12360 15090 0 2 177,2061, 0,669, +,+, 636817 LINE CR1 585 chrUn_NT_466221v1 1815 2990 GGXHOI 363 - 1815 2990 0 2 797,360, 0,815, -,-, 636820 Satellite W-chromosome 585 chrUn_NT_466221v1 6179 6908 GGXHOI 302 - 6179 6908 0 3 176,319,168, 0,220,561, -,-,-, 636823 Satellite W-chromosome 585 chrUn_NT_466221v1 7339 8971 GGXHOI 347 - 7339 8971 0 2 598,1015, 0,617, -,-, 636824 Satellite W-chromosome 585 chrUn_NT_466221v1 10551 15878 GGERV10_LTR 688 - 10551 15878 0 2 141,5186, 0,141, -,-, 636827 LTR ERVL 585 chrUn_NT_466222v1 3011 4883 GGXHOI 460 - 3011 4883 0 3 274,497,221, 0,753,1651, -,-,-, 636833 Satellite W-chromosome 585 chrUn_NT_466222v1 4955 6148 GGXHOI 424 - 4955 6148 0 5 130,143,363,116,123, 0,333,490,891,1070, -,-,-,-,-, 636836 Satellite W-chromosome 585 chrUn_NT_466222v1 6252 7065 GGXHOI 435 - 6252 7065 0 2 247,553, 0,260, -,-, 636838 Satellite W-chromosome 585 chrUn_NT_466222v1 7975 10219 GGXHOI 548 - 7975 10219 0 3 1203,314,214, 0,1528,2030, -,-,-, 636842 Satellite W-chromosome 585 chrUn_NT_466222v1 10632 12477 GGXHOI 518 - 10632 12477 0 2 195,1365, 0,480, -,-, 636846 Satellite W-chromosome 585 chrUn_NT_466222v1 12545 13481 GGXHOI 455 - 12545 13481 0 2 476,402, 0,534, -,-, 636848 Satellite W-chromosome 585 chrUn_NT_466222v1 13746 15864 GGXHOI 480 - 13746 15864 0 2 887,893, 0,1225, -,-, 636851 Satellite W-chromosome 585 chrUn_NT_466223v1 1670 2705 CR1-B2 632 + 1670 2705 0 2 225,807, 0,228, +,+, 636854 LINE CR1 585 chrUn_NT_466225v1 634 1221 GGLTR3F1 755 - 634 1221 0 2 98,487, 0,100, -,-, 636903 LTR ERVL 585 chrUn_NT_466226v1 10070 15847 GGXHOI 385 - 10070 15847 0 6 906,478,2946,433,446,388, 0,927,1423,4418,4914,5389, -,-,-,-,-,-, 636918 Satellite W-chromosome 585 chrUn_NT_466227v1 5913 7817 GGXHOI 409 - 5913 7817 0 2 437,1451, 0,453, -,-, 636920 Satellite W-chromosome 585 chrUn_NT_466227v1 7908 9699 GGXHOI 425 - 7908 9699 0 3 841,367,551, 0,856,1240, -,-,-, 636921 Satellite W-chromosome 585 chrUn_NT_466227v1 9782 13548 GGXHOI 344 - 9782 13548 0 8 151,345,117,394,90,1401,850,220, 0,213,603,738,1147,1258,2680,3546, -,-,-,-,-,-,-,-, 636922 Satellite W-chromosome 585 chrUn_NT_466227v1 13638 15871 GGXHOI 369 - 13638 15871 0 5 568,1006,197,91,257, 0,618,1659,1870,1976, -,-,-,-,-, 636923 Satellite W-chromosome 585 chrUn_NT_466228v1 2939 3265 (ATGGAG)n 492 + 2939 3265 0 2 84,125, 0,201, +,+, 636932 Simple_repeat Simple_repeat 585 chrUn_NT_466230v1 8640 8782 G-rich 370 + 8640 8782 0 2 52,52, 0,90, +,+, 636969 Low_complexity Low_complexity 585 chrUn_NT_466231v1 4251 8958 CR1-D2 558 - 4251 8958 0 2 572,806, 0,3901, -,-, 636986 LINE CR1 585 chrUn_NT_466231v1 5518 8166 CR1-D 662 - 5518 8166 0 3 1643,897,108, 0,1643,2540, -,-,-, 636987 LINE CR1 585 chrUn_NT_466231v1 8948 9195 Char12Mar1_GG 596 - 8948 9195 0 2 73,174, 0,73, -,-, 636988 DNA hAT-Charlie 585 chrUn_NT_466232v1 5799 6816 GGXHOI 379 - 5799 6816 0 2 457,530, 0,487, -,-, 636993 Satellite W-chromosome 585 chrUn_NT_466232v1 7601 8136 (CGAGG)n 630 + 7601 8136 0 2 238,135, 0,400, +,+, 636999 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 8185 10503 (CGAGG)n 576 + 8185 10503 0 6 306,123,18,32,164,159, 0,1076,1372,1603,1811,2159, +,+,+,+,+,+, 637002 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 10376 10883 (CAAGG)n 454 + 10376 10883 0 2 157,169, 0,338, +,+, 637010 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 10824 11410 (CGAGG)n 598 + 10824 11410 0 2 183,383, 0,203, +,+, 637012 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 11520 12037 (CGAGG)n 618 + 11520 12037 0 2 214,102, 0,415, +,+, 637014 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 12183 13967 (CGAGG)n 556 + 12183 13967 0 4 585,542,214,376, 0,618,1176,1408, +,+,+,+, 637017 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 14316 14678 (CGAGG)n 566 + 14316 14678 0 2 188,143, 0,219, +,+, 637021 Simple_repeat Simple_repeat 585 chrUn_NT_466232v1 14926 15814 (CGAGG)n 564 + 14926 15814 0 2 499,360, 0,528, +,+, 637024 Simple_repeat Simple_repeat 585 chrUn_NT_466233v1 6320 6943 CR1-H 677 - 6320 6943 0 2 139,478, 0,145, -,-, 637028 LINE CR1 585 chrUn_NT_466233v1 8889 10160 CR1-H 566 - 8889 10160 0 2 117,1154, 0,117, -,-, 637033 LINE CR1 585 chrUn_NT_466234v1 5216 5325 (TTTGC)n 326 + 5216 5325 0 2 52,8, 0,101, +,+, 637041 Simple_repeat Simple_repeat 585 chrUn_NT_466234v1 14628 15250 CR1-H 687 - 14628 15250 0 2 139,477, 0,145, -,-, 637051 LINE CR1 585 chrUn_NT_466235v1 1061 3563 GGXHOI 407 - 1061 3563 0 3 1998,146,334, 0,2011,2168, -,-,-, 637053 Satellite W-chromosome 585 chrUn_NT_466235v1 3642 4629 GGXHOI 390 - 3642 4629 0 2 641,331, 0,656, -,-, 637054 Satellite W-chromosome 585 chrUn_NT_466235v1 4713 6773 GGXHOI 419 - 4713 6773 0 4 557,979,146,336, 0,575,1567,1724, -,-,-,-, 637055 Satellite W-chromosome 585 chrUn_NT_466235v1 6856 7848 GGXHOI 387 - 6856 7848 0 2 645,332, 0,660, -,-, 637056 Satellite W-chromosome 585 chrUn_NT_466235v1 7932 8920 GGXHOI 393 - 7932 8920 0 2 639,334, 0,654, -,-, 637057 Satellite W-chromosome 585 chrUn_NT_466235v1 9002 9991 GGXHOI 414 - 9002 9991 0 3 484,146,336, 0,496,653, -,-,-, 637058 Satellite W-chromosome 585 chrUn_NT_466235v1 10074 11066 GGXHOI 413 - 10074 11066 0 3 487,146,335, 0,500,657, -,-,-, 637059 Satellite W-chromosome 585 chrUn_NT_466235v1 11149 12141 GGXHOI 386 - 11149 12141 0 2 644,333, 0,659, -,-, 637060 Satellite W-chromosome 585 chrUn_NT_466235v1 12223 15338 GGXHOI 421 - 12223 15338 0 6 553,148,871,984,146,335, 0,572,735,1626,2623,2780, -,-,-,-,-,-, 637061 Satellite W-chromosome 585 chrUn_NT_466237v1 5219 7280 GGLTR7-int 655 + 5219 7280 0 3 1323,74,33, 0,1953,2028, +,+,+, 637086 LTR ERV1 585 chrUn_NT_466237v1 11942 12782 Z-REP 518 - 11942 12782 0 2 316,440, 0,400, -,-, 637090 Satellite macro 585 chrUn_NT_466238v1 1828 2791 Sat-CR1_GG 217 + 1828 2791 0 2 254,661, 0,302, +,+, 637098 Satellite Satellite 585 chrUn_NT_466238v1 3172 4420 Sat-CR1_GG 211 + 3172 4420 0 3 538,254,404, 0,554,844, +,+,+, 637099 Satellite Satellite 585 chrUn_NT_466238v1 10422 10926 Sat-CR1_GG 178 + 10422 10926 0 2 258,86, 0,418, +,+, 637109 Satellite Satellite 585 chrUn_NT_466238v1 12951 14374 Sat-CR1_GG 202 + 12951 14374 0 2 372,717, 0,706, +,+, 637113 Satellite Satellite 585 chrUn_NT_466239v1 1065 2330 (CGAGG)n 547 + 1065 2330 0 5 175,178,448,176,180, 0,192,387,872,1085, +,+,+,+,+, 637122 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 3366 4407 (CGAGG)n 487 + 3366 4407 0 3 534,166,122, 0,573,919, +,+,+, 637127 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 5052 6186 (CGAGG)n 511 + 5052 6186 0 3 231,339,378, 0,402,756, +,+,+, 637132 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 6264 7649 (CGAGG)n 533 + 6264 7649 0 3 446,125,611, 0,470,774, +,+,+, 637135 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 7809 8752 (CGAGG)n 539 + 7809 8752 0 2 527,361, 0,582, +,+, 637138 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 10747 11697 (CGAGG)n 562 + 10747 11697 0 3 538,180,184, 0,572,766, +,+,+, 637149 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 11919 12306 (CGAGG)n 547 + 11919 12306 0 2 179,179, 0,208, +,+, 637151 Simple_repeat Simple_repeat 585 chrUn_NT_466239v1 14734 15248 (CGAGG)n 552 + 14734 15248 0 3 178,183,119, 0,194,395, +,+,+, 637162 Simple_repeat Simple_repeat 585 chrUn_NT_466240v1 11824 13588 GGERVL-A-int 728 + 11824 13588 0 2 462,1302, 0,462, +,+, 637174 LTR ERVL 585 chrUn_NT_466241v1 3083 5612 GGXHOI 552 - 3083 5612 0 4 37,367,105,904, 0,242,978,1625, -,-,-,-, 637182 Satellite W-chromosome 585 chrUn_NT_466241v1 8068 10184 Sat-CR1_GG 182 - 8068 10184 0 2 1291,159, 0,1957, -,-, 637192 Satellite Satellite 585 chrUn_NT_466241v1 10080 12466 GGXHOI 560 - 10080 12466 0 2 186,1551, 0,835, -,-, 637194 Satellite W-chromosome 585 chrUn_NT_466243v1 331 12020 GGXHOI 397 + 331 12020 0 12 574,928,802,1630,802,2778,961,311,797,1194,302,374, 0,618,1567,2384,4035,4852,7653,8637,8969,9780,10994,11315, +,+,+,+,+,+,+,+,+,+,+,+, 637208 Satellite W-chromosome 585 chrUn_NT_466243v1 12108 15574 GGXHOI 390 + 12108 15574 0 3 690,528,2214, 0,705,1252, +,+,+, 637209 Satellite W-chromosome 585 chrUn_NT_466244v1 4410 6647 GGERVL-A-int 799 + 4410 6647 0 3 1182,494,560, 0,1182,1677, +,+,+, 637213 LTR ERVL 585 chrUn_NT_466244v1 6633 9887 GGERVL-A-int 791 + 6633 9887 0 3 2199,494,560, 0,2199,2694, +,+,+, 637214 LTR ERVL 585 chrUn_NT_466244v1 9873 13126 GGERVL-A-int 790 + 9873 13126 0 3 2198,494,560, 0,2198,2693, +,+,+, 637215 LTR ERVL 585 chrUn_NT_466244v1 13112 15787 GGLTR3F1 938 + 13112 15787 0 2 2190,485, 0,2190, +,+, 637216 LTR ERVL 585 chrUn_NT_466245v1 5068 8201 GGLTR7-int 413 + 5068 8201 0 4 116,1649,949,277, 0,116,1860,2856, +,+,+,+, 637223 LTR ERV1 585 chrUn_NT_466246v1 122 1391 (CGAGG)n 524 + 122 1391 0 2 698,560, 0,709, +,+, 637232 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 3561 4145 (CGAGG)n 519 + 3561 4145 0 2 377,177, 0,407, +,+, 637240 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 4500 5250 (CGAGG)n 488 + 4500 5250 0 2 182,536, 0,214, +,+, 637243 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 5299 5693 (CGAGG)n 529 + 5299 5693 0 2 202,178, 0,216, +,+, 637245 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 6422 7070 (CGAGG)n 565 + 6422 7070 0 2 436,175, 0,473, +,+, 637249 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 7737 8458 (CGAGG)n 479 + 7737 8458 0 2 357,352, 0,369, +,+, 637254 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 9249 10068 (CGAGG)n 507 + 9249 10068 0 3 174,108,320, 0,211,499, +,+,+, 637258 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 10800 12444 (CGAGG)n 542 + 10800 12444 0 4 673,228,247,113, 0,850,1108,1531, +,+,+,+, 637265 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 13138 14370 (CGAGG)n 507 + 13138 14370 0 3 184,251,580, 0,229,652, +,+,+, 637273 Simple_repeat Simple_repeat 585 chrUn_NT_466246v1 14440 14779 (CGAGG)n 516 + 14440 14779 0 2 122,40, 0,299, +,+, 637275 Simple_repeat Simple_repeat 585 chrUn_NT_466248v1 1953 6575 CR1-D2 568 - 1953 6575 0 2 572,779, 0,3843, -,-, 637291 LINE CR1 585 chrUn_NT_466248v1 3208 5810 CR1-D 670 - 3208 5810 0 3 1615,879,108, 0,1615,2494, -,-,-, 637292 LINE CR1 585 chrUn_NT_466249v1 11642 12019 (CAAGG)n 592 + 11642 12019 0 2 162,27, 0,350, +,+, 637308 Simple_repeat Simple_repeat 585 chrUn_NT_466249v1 12058 12715 (CAAGG)n 566 + 12058 12715 0 2 174,305, 0,352, +,+, 637311 Simple_repeat Simple_repeat 585 chrUn_NT_466249v1 13525 15565 GGLTR7A 575 - 13525 15565 0 2 344,1612, 0,428, -,-, 637317 LTR ERV1 585 chrUn_NT_466250v1 486 9912 GGXHOI 401 + 486 9912 0 17 305,651,395,655,357,695,359,695,359,695,359,695,359,609,479,654,853, 0,324,990,1404,2074,2446,3156,3530,4240,4614,5324,5698,6408,6782,7406,7904,8573, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 637320 Satellite W-chromosome 585 chrUn_NT_466250v1 13950 14909 GGXHOI 325 - 13950 14909 0 2 598,339, 0,620, -,-, 637327 Satellite W-chromosome 585 chrUn_NT_466252v1 671 1790 CR1-B2 700 - 671 1790 0 2 891,225, 0,894, -,-, 637333 LINE CR1 585 chrUn_NT_466252v1 6639 7130 CR1-X 491 + 6639 7130 0 3 98,132,219, 0,98,272, +,+,+, 637337 LINE CR1 585 chrUn_NT_466253v1 8709 9977 CR1-H 590 + 8709 9977 0 2 1155,113, 0,1155, +,+, 637353 LINE CR1 585 chrUn_NT_466253v1 12255 12878 CR1-H 678 + 12255 12878 0 2 478,139, 0,484, +,+, 637357 LINE CR1 585 chrUn_NT_466254v1 211 775 GGXHOI 526 - 211 775 0 2 22,202, 0,362, -,-, 637361 Satellite W-chromosome 585 chrUn_NT_466254v1 865 1941 GGXHOI 558 - 865 1941 0 2 531,205, 0,871, -,-, 637363 Satellite W-chromosome 585 chrUn_NT_466254v1 2030 3113 GGXHOI 558 - 2030 3113 0 3 197,60,205, 0,478,878, -,-,-, 637365 Satellite W-chromosome 585 chrUn_NT_466254v1 3202 4285 GGXHOI 560 - 3202 4285 0 2 538,205, 0,878, -,-, 637368 Satellite W-chromosome 585 chrUn_NT_466254v1 4374 5457 GGXHOI 560 - 4374 5457 0 2 538,205, 0,878, -,-, 637370 Satellite W-chromosome 585 chrUn_NT_466254v1 5546 6629 GGXHOI 560 - 5546 6629 0 2 538,205, 0,878, -,-, 637372 Satellite W-chromosome 585 chrUn_NT_466254v1 6718 8975 GGXHOI 554 - 6718 8975 0 3 539,833,205, 0,879,2052, -,-,-, 637374 Satellite W-chromosome 585 chrUn_NT_466254v1 9064 13649 GGXHOI 544 - 9064 13649 0 6 197,61,832,832,490,591, 0,478,879,2051,3223,3994, -,-,-,-,-,-, 637377 Satellite W-chromosome 585 chrUn_NT_466254v1 14782 15800 GGXHOI 524 - 14782 15800 0 2 535,145, 0,873, -,-, 637385 Satellite W-chromosome 585 chrUn_NT_466255v1 454 4125 GGXHOI 381 - 454 4125 0 2 1607,2052, 0,1619, -,-, 637388 Satellite W-chromosome 585 chrUn_NT_466255v1 4361 6441 GGXHOI 356 - 4361 6441 0 5 177,268,581,144,819, 0,199,491,1101,1261, -,-,-,-,-, 637389 Satellite W-chromosome 585 chrUn_NT_466255v1 7710 10524 GGXHOI 303 - 7710 10524 0 3 1456,575,705, 0,1501,2109, -,-,-, 637391 Satellite W-chromosome 585 chrUn_NT_466255v1 11252 11755 GGXHOI 387 - 11252 11755 0 2 404,86, 0,417, -,-, 637393 Satellite W-chromosome 585 chrUn_NT_466255v1 11848 12919 GGXHOI 326 - 11848 12919 0 2 658,396, 0,675, -,-, 637394 Satellite W-chromosome 585 chrUn_NT_466255v1 13230 15779 GGXHOI 341 - 13230 15779 0 4 1032,139,772,494, 0,1091,1241,2055, -,-,-,-, 637395 Satellite W-chromosome 585 chrUn_NT_466256v1 553 3136 GGXHOI 500 + 553 3136 0 5 197,225,431,330,455, 0,481,1004,1472,2128, +,+,+,+,+, 637397 Satellite W-chromosome 585 chrUn_NT_466256v1 3890 4773 GGXHOI 598 + 3890 4773 0 2 209,197, 0,686, +,+, 637404 Satellite W-chromosome 585 chrUn_NT_466256v1 4815 7574 GGXHOI 516 + 4815 7574 0 4 495,194,807,304, 0,806,1323,2455, +,+,+,+, 637407 Satellite W-chromosome 585 chrUn_NT_466256v1 7862 14344 GGXHOI 556 + 7862 14344 0 13 209,247,194,192,35,372,194,247,194,246,17,152,17, 0,534,1228,1745,2343,2856,3549,4065,4758,5275,5964,5993,6465, +,+,+,+,+,+,+,+,+,+,+,+,+, 637413 Satellite W-chromosome 585 chrUn_NT_466257v1 1167 15761 GGXHOI 385 - 1167 15761 0 7 972,463,1170,2208,4931,3612,1066, 0,998,1481,2685,4925,9895,13528, -,-,-,-,-,-,-, 637428 Satellite W-chromosome 585 chrUn_NT_466259v1 6875 7495 CR1-H 657 - 6875 7495 0 2 138,477, 0,143, -,-, 637442 LINE CR1 585 chrUn_NT_466260v1 1994 3596 GGXHOI 540 - 1994 3596 0 2 836,727, 0,875, -,-, 637454 Satellite W-chromosome 585 chrUn_NT_466260v1 5617 7151 GGXHOI 570 - 5617 7151 0 2 962,553, 0,981, -,-, 637457 Satellite W-chromosome 585 chrUn_NT_466260v1 7217 9219 GGXHOI 473 - 7217 9219 0 3 884,390,692, 0,902,1310, -,-,-, 637458 Satellite W-chromosome 585 chrUn_NT_466260v1 9285 13387 GGXHOI 533 - 9285 13387 0 3 1341,906,1803, 0,1377,2299, -,-,-, 637459 Satellite W-chromosome 585 chrUn_NT_466260v1 14581 15092 GGXHOI 604 - 14581 15092 0 2 163,286, 0,225, -,-, 637461 Satellite W-chromosome 585 chrUn_NT_466261v1 2096 8746 GGXHOI 426 + 2096 8746 0 9 831,1292,1201,576,512,207,457,1035,414, 0,851,2154,3368,3960,4486,4711,5184,6236, +,+,+,+,+,+,+,+,+, 637465 Satellite W-chromosome 585 chrUn_NT_466261v1 9025 10679 GGXHOI 388 + 9025 10679 0 2 1077,515, 0,1139, +,+, 637466 Satellite W-chromosome 585 chrUn_NT_466261v1 10778 11829 GGXHOI 389 + 10778 11829 0 2 472,516, 0,535, +,+, 637467 Satellite W-chromosome 585 chrUn_NT_466261v1 11928 15320 GGXHOI 440 + 11928 15320 0 4 1095,849,647,757, 0,1112,1972,2635, +,+,+,+, 637468 Satellite W-chromosome 585 chrUn_NT_466262v1 2842 3633 GGXHOI 471 - 2842 3633 0 3 152,200,385, 0,163,406, -,-,-, 637471 Satellite W-chromosome 585 chrUn_NT_466262v1 4850 6097 GGXHOI 449 - 4850 6097 0 3 150,108,954, 0,170,293, -,-,-, 637473 Satellite W-chromosome 585 chrUn_NT_466262v1 6203 13409 GGXHOI 422 - 6203 13409 0 10 143,1571,795,814,948,480,441,1043,242,582, 0,163,1752,2564,3390,4353,4848,5306,6367,6624, -,-,-,-,-,-,-,-,-,-, 637474 Satellite W-chromosome 585 chrUn_NT_466262v1 13476 15733 GGXHOI 385 - 13476 15733 0 2 1018,1222, 0,1035, -,-, 637475 Satellite W-chromosome 585 chrUn_NT_466263v1 1736 2984 GGXHOI 384 - 1736 2984 0 3 415,307,488, 0,432,760, -,-,-, 637480 Satellite W-chromosome 585 chrUn_NT_466263v1 4170 4992 GGXHOI 411 - 4170 4992 0 2 307,494, 0,328, -,-, 637485 Satellite W-chromosome 585 chrUn_NT_466263v1 7037 8170 GGXHOI 408 - 7037 8170 0 2 692,422, 0,711, -,-, 637491 Satellite W-chromosome 585 chrUn_NT_466263v1 11057 12188 GGXHOI 401 - 11057 12188 0 2 689,423, 0,708, -,-, 637500 Satellite W-chromosome 585 chrUn_NT_466263v1 13718 14861 GGXHOI 372 - 13718 14861 0 3 372,298,435, 0,388,708, -,-,-, 637505 Satellite W-chromosome 585 chrUn_NT_466264v1 7750 8825 GGXHOI 427 - 7750 8825 0 2 894,157, 0,918, -,-, 637512 Satellite W-chromosome 585 chrUn_NT_466264v1 8928 12019 GGXHOI 414 - 8928 12019 0 6 446,146,903,146,1054,329, 0,458,620,1536,1693,2762, -,-,-,-,-,-, 637513 Satellite W-chromosome 585 chrUn_NT_466264v1 12139 15235 GGXHOI 416 - 12139 15235 0 6 607,902,147,901,146,328, 0,621,1535,1693,2607,2768, -,-,-,-,-,-, 637514 Satellite W-chromosome 585 chrUn_NT_466265v1 8030 8656 CR1-H 646 - 8030 8656 0 2 141,479, 0,147, -,-, 637524 LINE CR1 585 chrUn_NT_466265v1 10611 11974 CR1-H 657 - 10611 11974 0 2 115,1245, 0,118, -,-, 637527 LINE CR1 585 chrUn_NT_466266v1 910 2382 GGXHOI 313 - 910 2382 0 3 380,355,612, 0,442,860, -,-,-, 637530 Satellite W-chromosome 585 chrUn_NT_466266v1 3721 6610 GGXHOI 335 - 3721 6610 0 2 273,2595, 0,294, -,-, 637532 Satellite W-chromosome 585 chrUn_NT_466266v1 7983 11264 GGXHOI 358 - 7983 11264 0 4 559,517,1088,1019, 0,620,1158,2262, -,-,-,-, 637535 Satellite W-chromosome 585 chrUn_NT_466266v1 12336 14593 GGXHOI 323 - 12336 14593 0 2 1741,461, 0,1796, -,-, 637538 Satellite W-chromosome 585 chrUn_NT_466268v1 877 4500 GGXHOI 372 - 877 4500 0 5 300,869,339,343,1706, 0,317,1202,1559,1917, -,-,-,-,-, 637554 Satellite W-chromosome 585 chrUn_NT_466268v1 4575 6165 GGXHOI 357 - 4575 6165 0 5 313,360,265,285,252, 0,324,704,1032,1338, -,-,-,-,-, 637555 Satellite W-chromosome 585 chrUn_NT_466268v1 6369 8268 GGXHOI 328 - 6369 8268 0 2 138,1709, 0,190, -,-, 637556 Satellite W-chromosome 585 chrUn_NT_466268v1 8344 10579 GGXHOI 332 - 8344 10579 0 2 492,1722, 0,513, -,-, 637557 Satellite W-chromosome 585 chrUn_NT_466268v1 10667 11139 GGXHOI 266 - 10667 11139 0 2 152,262, 0,210, -,-, 637558 Satellite W-chromosome 585 chrUn_NT_466268v1 11205 14223 GGXHOI 359 - 11205 14223 0 5 786,373,185,276,1272, 0,812,1243,1448,1746, -,-,-,-,-, 637559 Satellite W-chromosome 585 chrUn_NT_466268v1 14326 15630 GGXHOI 370 - 14326 15630 0 4 520,304,152,217, 0,541,900,1087, -,-,-,-, 637560 Satellite W-chromosome 585 chrUn_NT_466269v1 1352 11855 GGXHOI 388 - 1352 11855 0 4 4543,2119,3396,363, 0,4594,6730,10140, -,-,-,-, 637562 Satellite W-chromosome 585 chrUn_NT_466269v1 11922 13719 GGXHOI 414 - 11922 13719 0 2 459,1320, 0,477, -,-, 637563 Satellite W-chromosome 585 chrUn_NT_466270v1 2320 2835 GGXHOI 382 + 2320 2835 0 2 349,148, 0,367, +,+, 637566 Satellite W-chromosome 585 chrUn_NT_466270v1 3294 5184 GGXHOI 395 + 3294 5184 0 4 450,419,465,426, 0,504,944,1464, +,+,+,+, 637568 Satellite W-chromosome 585 chrUn_NT_466270v1 6103 7196 GGXHOI 381 + 6103 7196 0 2 621,457, 0,636, +,+, 637570 Satellite W-chromosome 585 chrUn_NT_466270v1 7326 9313 GGXHOI 391 + 7326 9313 0 2 920,1046, 0,941, +,+, 637571 Satellite W-chromosome 585 chrUn_NT_466270v1 9918 10814 GGXHOI 395 + 9918 10814 0 2 426,436, 0,460, +,+, 637573 Satellite W-chromosome 585 chrUn_NT_466270v1 10913 13180 GGXHOI 384 + 10913 13180 0 5 404,547,613,363,197, 0,463,1026,1653,2070, +,+,+,+,+, 637574 Satellite W-chromosome 585 chrUn_NT_466270v1 13915 15727 GGXHOI 396 + 13915 15727 0 3 408,523,845, 0,426,967, +,+,+, 637576 Satellite W-chromosome 585 chrUn_NT_466272v1 3287 6272 GGLTR7-int 395 + 3287 6272 0 3 1620,930,277, 0,1731,2708, +,+,+, 637605 LTR ERV1 585 chrUn_NT_466272v1 14680 15410 GGLTR7-int 511 + 14680 15410 0 2 103,161, 0,569, +,+, 637615 LTR ERV1 585 chrUn_NT_466273v1 1119 6128 GGXHOI 358 - 1119 6128 0 7 677,1569,558,436,547,986,133, 0,702,2288,2862,3316,3879,4876, -,-,-,-,-,-,-, 637620 Satellite W-chromosome 585 chrUn_NT_466273v1 6215 9043 GGXHOI 356 - 6215 9043 0 5 143,791,786,422,586, 0,185,994,1803,2242, -,-,-,-,-, 637621 Satellite W-chromosome 585 chrUn_NT_466273v1 9127 12619 GGXHOI 370 - 9127 12619 0 5 326,1066,467,669,880, 0,356,1445,1923,2612, -,-,-,-,-, 637622 Satellite W-chromosome 585 chrUn_NT_466273v1 12684 15169 GGXHOI 382 - 12684 15169 0 5 923,121,263,653,389, 0,971,1106,1426,2096, -,-,-,-,-, 637623 Satellite W-chromosome 585 chrUn_NT_466274v1 3364 3699 (CAAGG)n 552 + 3364 3699 0 2 96,64, 0,271, +,+, 637631 Simple_repeat Simple_repeat 585 chrUn_NT_466274v1 4303 4701 (CAAGG)n 534 + 4303 4701 0 2 178,205, 0,193, +,+, 637635 Simple_repeat Simple_repeat 585 chrUn_NT_466274v1 4729 5313 (CAGGC)n 502 + 4729 5313 0 2 198,208, 0,376, +,+, 637637 Simple_repeat Simple_repeat 585 chrUn_NT_466274v1 7054 7389 (CCTTT)n 458 + 7054 7389 0 2 16,8, 0,327, +,+, 637646 Simple_repeat Simple_repeat 585 chrUn_NT_466275v1 3574 4870 GGXHOI 375 + 3574 4870 0 2 494,772, 0,524, +,+, 637660 Satellite W-chromosome 585 chrUn_NT_466275v1 5798 15197 GGXHOI 415 + 5798 15197 0 5 3770,4816,210,141,309, 0,3785,8655,8927,9090, +,+,+,+,+, 637662 Satellite W-chromosome 585 chrUn_NT_466276v1 1338 2030 (CTCTATGGGG)n 616 + 1338 2030 0 3 146,14,273, 0,267,419, +,+,+, 637670 Satellite Satellite 585 chrUn_NT_466276v1 3144 3661 (CTCTATGGGG)n 692 - 3144 3661 0 2 200,314, 0,203, -,-, 637681 Satellite Satellite 585 chrUn_NT_466276v1 3891 4047 (ACCCATTGGG)n 396 - 3891 4047 0 2 75,38, 0,118, -,-, 637684 Satellite Satellite 585 chrUn_NT_466276v1 4578 5463 (CCCCATTGGG)n 452 - 4578 5463 0 5 119,129,119,180,228, 0,141,302,443,657, -,-,-,-,-, 637688 Satellite Satellite 585 chrUn_NT_466276v1 5384 5644 (ACCCATTGGG)n 540 - 5384 5644 0 2 120,140, 0,120, -,-, 637689 Satellite Satellite 585 chrUn_NT_466276v1 5700 7033 GGERVL-A-int 791 + 5700 7033 0 2 56,1277, 0,56, +,+, 637690 LTR ERVL 585 chrUn_NT_466277v1 2456 11489 GGXHOI 404 - 2456 11489 0 13 857,149,1014,523,3074,867,674,775,141,248,138,98,137, 0,892,1056,2092,2631,5741,6647,7340,8132,8324,8585,8757,8896, -,-,-,-,-,-,-,-,-,-,-,-,-, 637703 Satellite W-chromosome 585 chrUn_NT_466277v1 12412 15710 GGXHOI 381 - 12412 15710 0 4 707,427,1027,1092, 0,724,1165,2206, -,-,-,-, 637705 Satellite W-chromosome 585 chrUn_NT_466278v1 558 1475 GGXHOI 558 + 558 1475 0 2 153,753, 0,164, +,+, 637708 Satellite W-chromosome 585 chrUn_NT_466278v1 3176 3723 GGXHOI 596 + 3176 3723 0 2 71,202, 0,345, +,+, 637711 Satellite W-chromosome 585 chrUn_NT_466278v1 3790 4889 GGXHOI 502 + 3790 4889 0 2 480,569, 0,530, +,+, 637713 Satellite W-chromosome 585 chrUn_NT_466278v1 5392 8092 GGXHOI 549 + 5392 8092 0 4 606,1098,80,359, 0,888,2237,2341, +,+,+,+, 637715 Satellite W-chromosome 585 chrUn_NT_466278v1 8158 11726 GGXHOI 563 + 8158 11726 0 4 814,811,316,938, 0,1184,2044,2630, +,+,+,+, 637718 Satellite W-chromosome 585 chrUn_NT_466278v1 12151 15709 GGXHOI 565 + 12151 15709 0 3 887,1929,360, 0,937,3198, +,+,+, 637722 Satellite W-chromosome 585 chrUn_NT_466279v1 1013 12160 GGXHOI 339 - 1013 12160 0 7 981,103,1697,951,2334,662,4185, 0,1037,1189,2917,3931,6278,6962, -,-,-,-,-,-,-, 637725 Satellite W-chromosome 585 chrUn_NT_466279v1 12311 12661 GGXHOI 308 - 12311 12661 0 2 83,231, 0,119, -,-, 637726 Satellite W-chromosome 585 chrUn_NT_466279v1 12744 13417 GGXHOI 365 - 12744 13417 0 2 296,358, 0,315, -,-, 637727 Satellite W-chromosome 585 chrUn_NT_466279v1 14486 15661 GGXHOI 388 - 14486 15661 0 3 148,192,790, 0,176,385, -,-,-, 637729 Satellite W-chromosome 585 chrUn_NT_466281v1 3109 3302 A-rich 333 + 3109 3302 0 2 37,98, 0,95, +,+, 637769 Low_complexity Low_complexity 585 chrUn_NT_466282v1 4249 5316 GGXHOI 413 + 4249 5316 0 2 413,634, 0,433, +,+, 637820 Satellite W-chromosome 585 chrUn_NT_466282v1 5397 10982 GGXHOI 408 + 5397 10982 0 8 203,101,144,1059,1137,1139,1059,628, 0,219,332,489,1568,2725,3884,4957, +,+,+,+,+,+,+,+, 637821 Satellite W-chromosome 585 chrUn_NT_466282v1 11376 13043 GGXHOI 393 - 11376 13043 0 4 145,320,728,416, 0,161,503,1251, -,-,-,-, 637822 Satellite W-chromosome 585 chrUn_NT_466282v1 13210 15348 GGXHOI 402 - 13210 15348 0 4 490,148,1062,390, 0,503,665,1748, -,-,-,-, 637823 Satellite W-chromosome 585 chrUn_NT_466283v1 14508 15158 Sat-CR1_GG 140 - 14508 15158 0 2 175,444, 0,206, -,-, 637853 Satellite Satellite 585 chrUn_NT_466284v1 2877 6884 GGXHOI 598 - 2877 6884 0 6 623,147,571,414,148,412, 0,634,1338,2467,2892,3595, -,-,-,-,-,-, 637858 Satellite W-chromosome 585 chrUn_NT_466284v1 6895 15685 GGXHOI 591 - 6895 15685 0 11 1269,299,147,299,146,567,297,147,559,362,245, 0,1936,2246,3058,3368,4067,5304,5612,6313,7427,8545, -,-,-,-,-,-,-,-,-,-,-, 637863 Satellite W-chromosome 585 chrUn_NT_466285v1 14090 14709 CR1-H 666 - 14090 14709 0 2 139,474, 0,145, -,-, 637887 LINE CR1 585 chrUn_NT_466286v1 1172 2070 GGXHOI 378 - 1172 2070 0 2 261,624, 0,274, -,-, 637891 Satellite W-chromosome 585 chrUn_NT_466286v1 3189 4332 GGXHOI 401 - 3189 4332 0 2 990,138, 0,1005, -,-, 637895 Satellite W-chromosome 585 chrUn_NT_466286v1 4587 5158 GGXHOI 386 - 4587 5158 0 2 288,267, 0,304, -,-, 637896 Satellite W-chromosome 585 chrUn_NT_466286v1 5403 6050 GGXHOI 417 - 5403 6050 0 3 233,201,152, 0,252,495, -,-,-, 637897 Satellite W-chromosome 585 chrUn_NT_466286v1 6707 8585 GGXHOI 387 - 6707 8585 0 3 1563,95,153, 0,1578,1725, -,-,-, 637900 Satellite W-chromosome 585 chrUn_NT_466286v1 9202 11052 GGXHOI 407 - 9202 11052 0 2 1190,603, 0,1247, -,-, 637903 Satellite W-chromosome 585 chrUn_NT_466286v1 14664 15682 GGXHOI 422 - 14664 15682 0 2 513,490, 0,528, -,-, 637910 Satellite W-chromosome 585 chrUn_NT_466287v1 9168 9614 GGXHOI 321 - 9168 9614 0 2 224,198, 0,248, -,-, 637913 Satellite W-chromosome 585 chrUn_NT_466287v1 9900 15438 GGXHOI 365 - 9900 15438 0 7 1524,263,512,242,222,1805,829, 0,1536,1815,2352,2639,2882,4709, -,-,-,-,-,-,-, 637914 Satellite W-chromosome 585 chrUn_NT_466288v1 710 15552 GGXHOI 389 + 710 15552 0 10 147,549,2818,636,1416,4078,527,1007,1839,1649, 0,170,731,3564,4217,5656,9750,10293,11316,13193, +,+,+,+,+,+,+,+,+,+, 637917 Satellite W-chromosome 585 chrUn_NT_466289v1 690 1169 (CAAGG)n 523 + 690 1169 0 2 357,88, 0,391, +,+, 637921 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 1612 3186 (CAAGG)n 563 + 1612 3186 0 4 196,149,709,252, 0,258,586,1322, +,+,+,+, 637925 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 3252 3867 (CAAGG)n 660 + 3252 3867 0 2 180,435, 0,180, +,+, 637928 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 5434 5986 (CAAGG)n 618 + 5434 5986 0 2 176,364, 0,188, +,+, 637933 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 5860 6714 (CAGGC)n 504 + 5860 6714 0 2 138,70, 0,784, +,+, 637934 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 5998 6644 (CAAGG)n 566 + 5998 6644 0 2 211,256, 0,390, +,+, 637935 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 6683 7896 (CAAGG)n 603 + 6683 7896 0 3 185,290,296, 0,196,917, +,+,+, 637937 Simple_repeat Simple_repeat 585 chrUn_NT_466289v1 10097 10394 GGXHOI 373 + 10097 10394 0 2 139,144, 0,153, +,+, 637945 Satellite W-chromosome 585 chrUn_NT_466289v1 10477 13392 GGXHOI 411 + 10477 13392 0 3 1122,1049,710, 0,1142,2205, +,+,+, 637946 Satellite W-chromosome 585 chrUn_NT_466290v1 12412 15683 GGXHOI 470 + 12412 15683 0 6 1277,264,150,245,1074,157, 0,1291,1569,1760,2026,3114, +,+,+,+,+,+, 637963 Satellite W-chromosome 585 chrUn_NT_466292v1 1322 4196 GGXHOI 374 - 1322 4196 0 6 309,141,333,146,1339,470, 0,324,479,827,1019,2404, -,-,-,-,-,-, 637990 Satellite W-chromosome 585 chrUn_NT_466292v1 4264 5351 GGXHOI 365 - 4264 5351 0 4 168,284,190,393, 0,184,484,694, -,-,-,-, 637991 Satellite W-chromosome 585 chrUn_NT_466292v1 5431 9065 GGXHOI 370 - 5431 9065 0 9 486,173,143,135,705,173,242,1141,224, 0,505,693,853,1004,1724,1919,2217,3410, -,-,-,-,-,-,-,-,-, 637992 Satellite W-chromosome 585 chrUn_NT_466292v1 9145 15241 GGXHOI 457 - 9145 15241 0 8 1701,1084,267,144,924,901,519,346, 0,1752,2858,3181,3350,4292,5210,5750, -,-,-,-,-,-,-,-, 637993 Satellite W-chromosome 585 chrUn_NT_466293v1 868 1499 GGXHOI 409 - 868 1499 0 2 392,180, 0,451, -,-, 637996 Satellite W-chromosome 585 chrUn_NT_466293v1 1700 2994 GGXHOI 332 - 1700 2994 0 3 135,743,302, 0,191,992, -,-,-, 637997 Satellite W-chromosome 585 chrUn_NT_466293v1 12377 13537 GGXHOI 326 - 12377 13537 0 2 889,253, 0,907, -,-, 638009 Satellite W-chromosome 585 chrUn_NT_466294v1 4197 4999 GGERVL-A-int 170 - 4197 4999 0 2 246,280, 0,522, -,-, 638013 LTR ERVL 585 chrUn_NT_466294v1 9822 10274 CR1-X2 514 + 9822 10274 0 3 234,41,78, 0,249,374, +,+,+, 638017 LINE CR1 585 chrUn_NT_466295v1 3048 3358 CR1-X 480 + 3048 3358 0 3 173,74,57, 0,176,253, +,+,+, 638024 LINE CR1 585 chrUn_NT_466295v1 8755 9879 CR1-B2 697 + 8755 9879 0 2 225,896, 0,228, +,+, 638028 LINE CR1 585 chrUn_NT_466297v1 2245 3514 CR1-H 606 - 2245 3514 0 2 117,1152, 0,117, -,-, 638045 LINE CR1 585 chrUn_NT_466297v1 14068 15650 GGLTR7-int 579 - 14068 15650 0 4 322,798,41,254, 0,404,1243,1328, -,-,-,-, 638060 LTR ERV1 585 chrUn_NT_466298v1 967 1771 (CACTG)n 361 + 967 1771 0 4 198,165,17,25, 0,198,584,779, +,+,+,+, 638064 Simple_repeat Simple_repeat 585 chrUn_NT_466298v1 1568 1960 (CATTG)n 429 + 1568 1960 0 2 178,214, 0,178, +,+, 638066 Simple_repeat Simple_repeat 585 chrUn_NT_466298v1 3293 3636 CR1-F2 411 + 3293 3636 0 2 68,272, 0,71, +,+, 638070 LINE CR1 585 chrUn_NT_466298v1 6824 6911 (GCCCCGC)n 314 + 6824 6911 0 2 22,26, 0,61, +,+, 638071 Simple_repeat Simple_repeat 585 chrUn_NT_466300v1 304 1437 GGXHOI 558 - 304 1437 0 2 526,160, 0,973, -,-, 638097 Satellite W-chromosome 585 chrUn_NT_466300v1 1503 2653 GGXHOI 534 - 1503 2653 0 4 28,187,192,213, 0,315,519,937, -,-,-,-, 638099 Satellite W-chromosome 585 chrUn_NT_466300v1 3044 3883 GGXHOI 540 - 3044 3883 0 2 216,162, 0,677, -,-, 638103 Satellite W-chromosome 585 chrUn_NT_466300v1 3955 5090 GGXHOI 520 - 3955 5090 0 3 17,195,277, 0,345,858, -,-,-, 638105 Satellite W-chromosome 585 chrUn_NT_466300v1 5410 5998 GGXHOI 602 - 5410 5998 0 2 271,37, 0,551, -,-, 638110 Satellite W-chromosome 585 chrUn_NT_466300v1 7553 11124 GGXHOI 546 - 7553 11124 0 6 19,892,223,247,194,291, 0,331,1520,2190,2762,3280, -,-,-,-,-,-, 638113 Satellite W-chromosome 585 chrUn_NT_466300v1 11194 13263 GGXHOI 518 - 11194 13263 0 4 17,202,250,488, 0,345,1006,1581, -,-,-,-, 638119 Satellite W-chromosome 585 chrUn_NT_466300v1 13598 14582 GGXHOI 421 - 13598 14582 0 2 150,822, 0,162, -,-, 638124 Satellite W-chromosome 585 chrUn_NT_466300v1 15069 15646 GGXHOI 456 - 15069 15646 0 2 354,27, 0,550, -,-, 638126 Satellite W-chromosome 585 chrUn_NT_466302v1 13196 13405 CR1-X1 497 + 13196 13405 0 2 63,146, 0,63, +,+, 638144 LINE CR1 585 chrUn_NT_466303v1 4208 6081 GGLTR7-int 599 - 4208 6081 0 3 74,663,511, 0,699,1362, -,-,-, 638148 LTR ERV1 585 chrUn_NT_466304v1 4459 8493 Sat-CR1_GG 166 - 4459 8493 0 2 447,883, 0,3151, -,-, 638160 Satellite Satellite 585 chrUn_NT_466304v1 9270 11994 GGXHOI 562 - 9270 11994 0 2 616,673, 0,2051, -,-, 638164 Satellite W-chromosome 585 chrUn_NT_466304v1 12037 15636 GGXHOI 570 - 12037 15636 0 3 189,201,73, 0,2339,3526, -,-,-, 638167 Satellite W-chromosome 585 chrUn_NT_466305v1 4728 11236 GGXHOI 405 - 4728 11236 0 7 511,978,970,968,970,974,1017, 0,531,1529,2519,3507,4497,5491, -,-,-,-,-,-,-, 638171 Satellite W-chromosome 585 chrUn_NT_466305v1 12891 15633 GGXHOI 407 - 12891 15633 0 3 936,963,806, 0,953,1936, -,-,-, 638174 Satellite W-chromosome 585 chrUn_NT_466306v1 511 1422 CR1-Y1_Aves 244 - 511 1422 0 2 206,658, 0,253, -,-, 638177 LINE CR1 585 chrUn_NT_466306v1 4345 6285 CR1-C 544 + 4345 6285 0 2 402,822, 0,1118, +,+, 638183 LINE CR1 585 chrUn_NT_466306v1 9659 11144 GGLTR7-int 142 - 9659 11144 0 2 810,164, 0,1321, -,-, 638185 LTR ERV1 585 chrUn_NT_466307v1 1370 4930 GGXHOI 427 + 1370 4930 0 3 1313,146,2077, 0,1324,1483, +,+,+, 638194 Satellite W-chromosome 585 chrUn_NT_466307v1 5015 6366 GGXHOI 432 + 5015 6366 0 3 338,146,843, 0,349,508, +,+,+, 638195 Satellite W-chromosome 585 chrUn_NT_466307v1 8495 9897 GGXHOI 342 - 8495 9897 0 2 1008,331, 0,1071, -,-, 638198 Satellite W-chromosome 585 chrUn_NT_466307v1 13818 15630 GGXHOI 373 - 13818 15630 0 3 187,578,986, 0,232,826, -,-,-, 638205 Satellite W-chromosome 585 chrUn_NT_466308v1 13200 15620 GGLTR7-int 579 + 13200 15620 0 2 331,789, 0,1631, +,+, 638215 LTR ERV1 585 chrUn_NT_466309v1 5894 6024 GA-rich 360 + 5894 6024 0 2 43,32, 0,98, +,+, 638227 Low_complexity Low_complexity 585 chrUn_NT_466309v1 7442 7573 GA-rich 332 + 7442 7573 0 2 42,31, 0,100, +,+, 638232 Low_complexity Low_complexity 585 chrUn_NT_466309v1 8925 9068 GA-rich 316 + 8925 9068 0 2 43,67, 0,76, +,+, 638235 Low_complexity Low_complexity 585 chrUn_NT_466309v1 10486 10628 GA-rich 296 + 10486 10628 0 2 43,66, 0,76, +,+, 638239 Low_complexity Low_complexity 585 chrUn_NT_466309v1 11988 12129 GA-rich 248 + 11988 12129 0 2 41,44, 0,97, +,+, 638241 Low_complexity Low_complexity 585 chrUn_NT_466309v1 13549 13692 GA-rich 316 + 13549 13692 0 2 43,67, 0,76, +,+, 638245 Low_complexity Low_complexity 585 chrUn_NT_466310v1 84 1595 (CGAGG)n 538 + 84 1595 0 4 486,182,621,178, 0,507,700,1333, +,+,+,+, 638251 Simple_repeat Simple_repeat 585 chrUn_NT_466310v1 2623 2999 (CGAGG)n 562 + 2623 2999 0 2 180,179, 0,197, +,+, 638258 Simple_repeat Simple_repeat 585 chrUn_NT_466310v1 3374 3676 (CGAGG)n 522 + 3374 3676 0 2 179,101, 0,201, +,+, 638262 Simple_repeat Simple_repeat 585 chrUn_NT_466310v1 3720 5321 (CGAGG)n 530 + 3720 5321 0 4 79,696,74,502, 0,105,974,1099, +,+,+,+, 638264 Simple_repeat Simple_repeat 585 chrUn_NT_466310v1 5387 7897 (CGAGG)n 568 + 5387 7897 0 6 217,163,645,26,197,617, 0,504,667,1488,1696,1893, +,+,+,+,+,+, 638267 Simple_repeat Simple_repeat 585 chrUn_NT_466310v1 8506 11226 GGERVL-B-int 767 + 8506 11226 0 2 322,2398, 0,322, +,+, 638276 LTR ERVL 585 chrUn_NT_466310v1 11945 12311 GGLTR7B 319 + 11945 12311 0 2 105,235, 0,131, +,+, 638278 LTR ERV1 585 chrUn_NT_466311v1 3735 4248 CR1-D2 595 - 3735 4248 0 2 72,307, 0,206, -,-, 638284 LINE CR1 585 chrUn_NT_466312v1 3459 5040 GGXHOI 367 - 3459 5040 0 2 448,1071, 0,510, -,-, 638302 Satellite W-chromosome 585 chrUn_NT_466312v1 6340 10369 GGXHOI 379 - 6340 10369 0 4 161,838,354,2554, 0,203,1103,1475, -,-,-,-, 638306 Satellite W-chromosome 585 chrUn_NT_466312v1 10699 13353 GGXHOI 384 - 10699 13353 0 3 146,1341,1055, 0,208,1599, -,-,-, 638307 Satellite W-chromosome 585 chrUn_NT_466312v1 13469 15555 GGXHOI 377 - 13469 15555 0 3 894,890,229, 0,956,1857, -,-,-, 638308 Satellite W-chromosome 585 chrUn_NT_466314v1 1479 1850 GGXHOI 380 + 1479 1850 0 2 180,137, 0,234, +,+, 638333 Satellite W-chromosome 585 chrUn_NT_466314v1 2242 3001 GGXHOI 365 + 2242 3001 0 3 430,148,148, 0,446,611, +,+,+, 638334 Satellite W-chromosome 585 chrUn_NT_466314v1 3509 6577 GGXHOI 376 + 3509 6577 0 5 1077,269,633,145,874, 0,1095,1382,2032,2194, +,+,+,+,+, 638335 Satellite W-chromosome 585 chrUn_NT_466314v1 7252 8748 GGXHOI 387 + 7252 8748 0 3 269,926,267, 0,286,1229, +,+,+, 638337 Satellite W-chromosome 585 chrUn_NT_466314v1 8889 9853 GGXHOI 395 + 8889 9853 0 2 679,268, 0,696, +,+, 638338 Satellite W-chromosome 585 chrUn_NT_466314v1 10156 15545 GGXHOI 356 + 10156 15545 0 8 263,926,636,145,1083,750,144,1231, 0,285,1268,1921,2088,3230,3997,4158, +,+,+,+,+,+,+,+, 638339 Satellite W-chromosome 585 chrUn_NT_466315v1 1374 3517 GGXHOI 351 - 1374 3517 0 3 1066,644,355, 0,1097,1788, -,-,-, 638341 Satellite W-chromosome 585 chrUn_NT_466315v1 5510 7173 GGXHOI 373 - 5510 7173 0 3 521,637,466, 0,543,1197, -,-,-, 638345 Satellite W-chromosome 585 chrUn_NT_466315v1 7555 9575 GGXHOI 363 - 7555 9575 0 4 145,146,596,1037, 0,162,325,983, -,-,-,-, 638346 Satellite W-chromosome 585 chrUn_NT_466315v1 9714 11696 GGXHOI 384 - 9714 11696 0 3 148,146,1654, 0,165,328, -,-,-, 638347 Satellite W-chromosome 585 chrUn_NT_466315v1 11836 13503 GGXHOI 375 - 11836 13503 0 4 147,146,903,419, 0,164,327,1248, -,-,-,-, 638348 Satellite W-chromosome 585 chrUn_NT_466315v1 13890 14865 GGXHOI 363 - 13890 14865 0 3 147,146,646, 0,164,329, -,-,-, 638349 Satellite W-chromosome 585 chrUn_NT_466317v1 1989 2132 GA-rich 292 + 1989 2132 0 2 43,67, 0,76, +,+, 638365 Low_complexity Low_complexity 585 chrUn_NT_466318v1 13036 15600 GGXHOI 421 - 13036 15600 0 3 636,1047,834, 0,656,1730, -,-,-, 638390 Satellite W-chromosome 585 chrUn_NT_466320v1 2541 3878 CR1-X 382 - 2541 3878 0 2 156,79, 0,1258, -,-, 638405 LINE CR1 585 chrUn_NT_466320v1 8339 9466 CR1-B2 685 + 8339 9466 0 2 224,900, 0,227, +,+, 638408 LINE CR1 585 chrUn_NT_466325v1 954 2688 GGXHOI 415 - 954 2688 0 2 1529,193, 0,1541, -,-, 638459 Satellite W-chromosome 585 chrUn_NT_466325v1 2803 10611 GGXHOI 414 - 2803 10611 0 2 3852,3937, 0,3871, -,-, 638460 Satellite W-chromosome 585 chrUn_NT_466325v1 11038 15575 GGXHOI 423 - 11038 15575 0 5 367,689,311,2474,516, 0,380,1131,1501,4021, -,-,-,-,-, 638461 Satellite W-chromosome 585 chrUn_NT_466326v1 6479 10168 CR1-H 626 - 6479 10168 0 4 139,478,117,1154, 0,145,2418,2535, -,-,-,-, 638465 LINE CR1 585 chrUn_NT_466327v1 1348 3496 GGXHOI 385 + 1348 3496 0 2 1080,1007, 0,1141, +,+, 638473 Satellite W-chromosome 585 chrUn_NT_466327v1 5969 8162 GGXHOI 380 + 5969 8162 0 2 1045,1085, 0,1108, +,+, 638478 Satellite W-chromosome 585 chrUn_NT_466327v1 10072 11224 GGXHOI 388 + 10072 11224 0 2 305,785, 0,367, +,+, 638482 Satellite W-chromosome 585 chrUn_NT_466327v1 11404 14631 GGXHOI 337 + 11404 14631 0 3 1041,1772,331, 0,1103,2896, +,+,+, 638483 Satellite W-chromosome 585 chrUn_NT_466328v1 5636 6256 CR1-H 684 - 5636 6256 0 2 138,476, 0,144, -,-, 638491 LINE CR1 585 chrUn_NT_466328v1 9066 9525 CR1-H 668 - 9066 9525 0 2 164,295, 0,164, -,-, 638495 LINE CR1 585 chrUn_NT_466329v1 2232 2852 CR1-H 669 + 2232 2852 0 2 477,137, 0,483, +,+, 638504 LINE CR1 585 chrUn_NT_466329v1 9033 11405 CR1-F0 829 + 9033 11405 0 3 1053,888,431, 0,1053,1941, +,+,+, 638507 LINE CR1 585 chrUn_NT_466329v1 14685 15308 CR1-C 664 - 14685 15308 0 2 65,558, 0,65, -,-, 638511 LINE CR1 585 chrUn_NT_466330v1 1517 5379 GGXHOI 554 + 1517 5379 0 2 1122,568, 0,3294, +,+, 638515 Satellite W-chromosome 585 chrUn_NT_466330v1 5404 7541 Sat-CR1_GG 150 + 5404 7541 0 2 40,306, 0,1831, +,+, 638517 Satellite Satellite 585 chrUn_NT_466330v1 7280 10235 GGXHOI 562 + 7280 10235 0 2 595,553, 0,2402, +,+, 638519 Satellite W-chromosome 585 chrUn_NT_466330v1 10672 11897 Sat-CR1_GG 180 + 10672 11897 0 2 647,416, 0,809, +,+, 638523 Satellite Satellite 585 chrUn_NT_466330v1 12359 13804 GGXHOI 466 + 12359 13804 0 3 116,239,164, 0,1023,1281, +,+,+, 638526 Satellite W-chromosome 585 chrUn_NT_466330v1 13774 15500 Sat-CR1_GG 170 + 13774 15500 0 3 46,30,428, 0,191,1298, +,+,+, 638528 Satellite Satellite 585 chrUn_NT_466331v1 592 2522 GGXHOI 369 - 592 2522 0 2 1702,193, 0,1737, -,-, 638534 Satellite W-chromosome 585 chrUn_NT_466331v1 10176 12062 GGXHOI 388 - 10176 12062 0 2 1666,193, 0,1693, -,-, 638545 Satellite W-chromosome 585 chrUn_NT_466332v1 3554 5256 GGXHOI 378 + 3554 5256 0 3 1170,146,352, 0,1187,1350, +,+,+, 638552 Satellite W-chromosome 585 chrUn_NT_466332v1 5437 7136 GGXHOI 362 + 5437 7136 0 3 1376,143,146, 0,1393,1553, +,+,+, 638553 Satellite W-chromosome 585 chrUn_NT_466332v1 7276 8974 GGXHOI 382 + 7276 8974 0 3 1167,146,351, 0,1184,1347, +,+,+, 638554 Satellite W-chromosome 585 chrUn_NT_466332v1 9155 10856 GGXHOI 388 + 9155 10856 0 3 882,430,309, 0,945,1392, +,+,+, 638555 Satellite W-chromosome 585 chrUn_NT_466332v1 12189 13082 GGXHOI 358 + 12189 13082 0 3 440,150,229, 0,499,664, +,+,+, 638557 Satellite W-chromosome 585 chrUn_NT_466333v1 230 825 (CAGGC)n 541 + 230 825 0 2 184,392, 0,203, +,+, 638562 Simple_repeat Simple_repeat 585 chrUn_NT_466333v1 1297 1587 (CAGGC)n 500 + 1297 1587 0 2 209,47, 0,243, +,+, 638566 Simple_repeat Simple_repeat 585 chrUn_NT_466333v1 2771 3307 (CAGGC)n 593 + 2771 3307 0 2 306,230, 0,306, +,+, 638577 Simple_repeat Simple_repeat 585 chrUn_NT_466333v1 3429 3801 (CAAGG)n 606 + 3429 3801 0 2 177,195, 0,177, +,+, 638580 Simple_repeat Simple_repeat 585 chrUn_NT_466333v1 3913 4343 (CAAGG)n 578 + 3913 4343 0 2 214,216, 0,214, +,+, 638582 Simple_repeat Simple_repeat 585 chrUn_NT_466333v1 7415 8940 GGERVL-B-int 826 + 7415 8940 0 2 778,747, 0,778, +,+, 638587 LTR ERVL 585 chrUn_NT_466333v1 8942 10288 GGLTR7-int 382 + 8942 10288 0 3 60,234,283, 0,62,1063, +,+,+, 638588 LTR ERV1 585 chrUn_NT_466334v1 832 2977 GGXHOI 416 + 832 2977 0 4 446,923,311,421, 0,457,1396,1724, +,+,+,+, 638593 Satellite W-chromosome 585 chrUn_NT_466334v1 3075 3531 GGXHOI 323 + 3075 3531 0 2 81,330, 0,126, +,+, 638594 Satellite W-chromosome 585 chrUn_NT_466334v1 4593 15559 GGXHOI 448 + 4593 15559 0 7 2301,2384,354,1353,1390,893,2195, 0,2318,4719,5089,6460,7867,8771, +,+,+,+,+,+,+, 638596 Satellite W-chromosome 585 chrUn_NT_466335v1 2589 6683 GGXHOI 550 - 2589 6683 0 3 1089,231,679, 0,2615,3415, -,-,-, 638601 Satellite W-chromosome 585 chrUn_NT_466335v1 6727 11227 GGXHOI 554 - 6727 11227 0 3 2305,117,800, 0,2890,3700, -,-,-, 638605 Satellite W-chromosome 585 chrUn_NT_466335v1 11251 15295 GGXHOI 562 - 11251 15295 0 4 405,122,674,1052, 0,1713,2068,2992, -,-,-,-, 638609 Satellite W-chromosome 585 chrUn_NT_466336v1 8126 8582 CR1-H 672 + 8126 8582 0 2 296,160, 0,296, +,+, 638623 LINE CR1 585 chrUn_NT_466336v1 10704 11331 CR1-H 680 + 10704 11331 0 2 469,139, 0,488, +,+, 638626 LINE CR1 585 chrUn_NT_466337v1 6268 6353 (CCAAC)n 750 + 6268 6353 0 2 25,45, 0,40, +,+, 638634 Simple_repeat Simple_repeat 585 chrUn_NT_466337v1 11886 12505 (GGTTG)n 576 + 11886 12505 0 2 183,417, 0,202, +,+, 638648 Simple_repeat Simple_repeat 585 chrUn_NT_466337v1 12738 13226 (AGTTG)n 540 + 12738 13226 0 2 262,202, 0,286, +,+, 638651 Simple_repeat Simple_repeat 585 chrUn_NT_466338v1 7966 9249 GGXHOI 355 - 7966 9249 0 3 270,259,663, 0,308,620, -,-,-, 638662 Satellite W-chromosome 585 chrUn_NT_466338v1 12644 15535 GGXHOI 341 - 12644 15535 0 3 637,1519,633, 0,682,2258, -,-,-, 638668 Satellite W-chromosome 585 chrUn_NT_466339v1 1547 2674 CR1-B2 686 - 1547 2674 0 2 899,225, 0,902, -,-, 638671 LINE CR1 585 chrUn_NT_466341v1 7496 7645 CR1-E 648 - 7496 7645 0 3 46,52,51, 0,46,98, -,-,-, 638726 LINE CR1 585 chrUn_NT_466341v1 8016 8426 CR1-H 549 - 8016 8426 0 2 52,57, 0,353, -,-, 638733 LINE CR1 585 chrUn_NT_466341v1 9019 9115 CR1AVI 593 - 9019 9115 0 2 48,48, 0,48, -,-, 638746 LINE CR1 585 chrUn_NT_466342v1 775 2010 (CCTTG)n 571 + 775 2010 0 4 356,165,317,182, 0,374,712,1053, +,+,+,+, 638773 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 2408 2912 (CCTTG)n 618 + 2408 2912 0 2 161,139, 0,365, +,+, 638777 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 4181 5776 (CCTTG)n 567 + 4181 5776 0 6 178,289,132,106,194,46, 0,178,648,964,1095,1549, +,+,+,+,+,+, 638783 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 6115 6675 (CCTTG)n 586 + 6115 6675 0 2 166,365, 0,195, +,+, 638788 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 7024 7556 (CCTTG)n 610 + 7024 7556 0 3 102,35,24, 0,290,508, +,+,+, 638791 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 7759 8118 (ACTTG)n 422 + 7759 8118 0 2 104,51, 0,308, +,+, 638796 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 8101 9040 (CCTTG)n 555 + 8101 9040 0 4 151,67,129,87, 0,327,428,852, +,+,+,+, 638798 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 9732 10608 (CCTTG)n 579 + 9732 10608 0 4 194,215,246,84, 0,194,427,792, +,+,+,+, 638805 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 10706 13363 (CCTTG)n 627 + 10706 13363 0 9 352,208,46,136,80,335,154,248,192, 0,352,764,810,1268,1368,1877,2217,2465, +,+,+,+,+,+,+,+,+, 638808 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 13448 14458 (CCTTG)n 581 + 13448 14458 0 3 206,173,285, 0,206,725, +,+,+, 638816 Simple_repeat Simple_repeat 585 chrUn_NT_466342v1 14748 15149 (CCTTG)n 617 + 14748 15149 0 2 183,218, 0,183, +,+, 638822 Simple_repeat Simple_repeat 585 chrUn_NT_466345v1 1967 5804 CR1-Y 729 - 1967 5804 0 3 120,401,13, 0,3423,3824, -,-,-, 638836 LINE CR1 585 chrUn_NT_466346v1 4167 6295 GGXHOI 365 + 4167 6295 0 2 1091,976, 0,1152, +,+, 638850 Satellite W-chromosome 585 chrUn_NT_466346v1 8985 9826 GGXHOI 370 + 8985 9826 0 2 312,509, 0,332, +,+, 638855 Satellite W-chromosome 585 chrUn_NT_466346v1 9929 11404 GGXHOI 367 + 9929 11404 0 2 1093,350, 0,1125, +,+, 638856 Satellite W-chromosome 585 chrUn_NT_466347v1 10627 15307 CR1-D2 568 - 10627 15307 0 2 573,807, 0,3873, -,-, 638869 LINE CR1 585 chrUn_NT_466347v1 11881 14514 CR1-D 671 - 11881 14514 0 3 1640,886,107, 0,1640,2526, -,-,-, 638871 LINE CR1 585 chrUn_NT_466347v1 15297 15541 Char12Mar1_GG 568 - 15297 15541 0 2 73,171, 0,73, -,-, 638872 DNA hAT-Charlie 585 chrUn_NT_466349v1 1577 4138 GGERVL-B-int 779 - 1577 4138 0 4 750,1073,53,313, 0,750,1824,2248, -,-,-,-, 638891 LTR ERVL 585 chrUn_NT_466349v1 6495 7544 GGLTR7A 775 - 6495 7544 0 2 586,462, 0,587, -,-, 638895 LTR ERV1 585 chrUn_NT_466349v1 8071 8498 GGLTR7A 886 - 8071 8498 0 2 253,174, 0,253, -,-, 638897 LTR ERV1 585 chrUn_NT_466349v1 9065 9837 (CAGGC)n 541 + 9065 9837 0 3 128,47,387, 0,312,385, +,+,+, 638902 Simple_repeat Simple_repeat 585 chrUn_NT_466349v1 10303 10772 (CAAGG)n 531 + 10303 10772 0 2 210,259, 0,210, +,+, 638906 Simple_repeat Simple_repeat 585 chrUn_NT_466349v1 10830 11617 (CAAGG)n 528 + 10830 11617 0 2 423,337, 0,450, +,+, 638908 Simple_repeat Simple_repeat 585 chrUn_NT_466349v1 12007 12544 (CAGGC)n 587 + 12007 12544 0 2 307,230, 0,307, +,+, 638915 Simple_repeat Simple_repeat 585 chrUn_NT_466349v1 12757 13156 (CAGGC)n 491 + 12757 13156 0 2 183,205, 0,194, +,+, 638919 Simple_repeat Simple_repeat 585 chrUn_NT_466350v1 12954 14050 CR1-D 648 + 12954 14050 0 2 315,762, 0,334, +,+, 638933 LINE CR1 585 chrUn_NT_466351v1 14976 15531 Sat-CR1_GG 856 + 14976 15531 0 2 133,340, 0,215, +,+, 638937 Satellite Satellite 585 chrUn_NT_466353v1 2884 3646 (CGAGG)n 476 + 2884 3646 0 3 179,182,324, 0,203,438, +,+,+, 638960 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 3710 5922 (CGAGG)n 562 + 3710 5922 0 4 1148,179,179,586, 0,1196,1430,1626, +,+,+,+, 638962 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 6019 6386 (CGAGG)n 513 + 6019 6386 0 2 175,178, 0,189, +,+, 638964 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 6975 10363 (CGAGG)n 555 + 6975 10363 0 8 399,565,338,426,322,219,181,177, 0,413,1159,1504,1945,2445,2999,3211, +,+,+,+,+,+,+,+, 638968 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 10434 12620 (CGAGG)n 536 + 10434 12620 0 4 213,571,316,871, 0,237,993,1315, +,+,+,+, 638973 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 12695 13684 (CGAGG)n 499 + 12695 13684 0 2 616,360, 0,629, +,+, 638975 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 14482 15058 (CGAGG)n 545 + 14482 15058 0 2 355,202, 0,374, +,+, 638978 Simple_repeat Simple_repeat 585 chrUn_NT_466353v1 15060 15507 (GCGAG)n 372 + 15060 15507 0 2 85,304, 0,143, +,+, 638979 Simple_repeat Simple_repeat 585 chrUn_NT_466354v1 2364 15514 GGXHOI 448 + 2364 15514 0 7 496,3055,3624,439,891,502,4029, 0,515,3587,7233,7689,8591,9121, +,+,+,+,+,+,+, 638982 Satellite W-chromosome 585 chrUn_NT_466355v1 694 1227 GGXHOI 410 + 694 1227 0 2 366,146, 0,387, +,+, 638984 Satellite W-chromosome 585 chrUn_NT_466355v1 1344 4266 GGXHOI 414 + 1344 4266 0 4 564,1201,866,252, 0,576,1792,2670, +,+,+,+, 638985 Satellite W-chromosome 585 chrUn_NT_466355v1 4393 8582 GGXHOI 448 + 4393 8582 0 4 1351,1394,389,1005, 0,1363,2777,3184, +,+,+,+, 638986 Satellite W-chromosome 585 chrUn_NT_466355v1 9189 15443 GGXHOI 419 + 9189 15443 0 13 399,304,555,1274,533,453,276,473,588,256,145,364,353, 0,411,726,1321,2622,3167,3631,3922,4414,5051,5324,5521,5901, +,+,+,+,+,+,+,+,+,+,+,+,+, 638988 Satellite W-chromosome 585 chrUn_NT_466356v1 4852 6599 GGERVL-A-int 729 - 4852 6599 0 2 1290,457, 0,1290, -,-, 638992 LTR ERVL 585 chrUn_NT_466358v1 457 3254 GGXHOI 381 + 457 3254 0 3 1084,1076,512, 0,1146,2285, +,+,+, 639003 Satellite W-chromosome 585 chrUn_NT_466358v1 14217 15518 GGXHOI 374 + 14217 15518 0 2 1044,194, 0,1107, +,+, 639018 Satellite W-chromosome 585 chrUn_NT_466359v1 4212 10357 GGXHOI 342 - 4212 10357 0 4 854,2402,1895,916, 0,869,3287,5229, -,-,-,-, 639021 Satellite W-chromosome 585 chrUn_NT_466359v1 10516 11612 GGXHOI 375 - 10516 11612 0 3 457,124,479, 0,473,617, -,-,-, 639022 Satellite W-chromosome 585 chrUn_NT_466359v1 11712 14062 GGXHOI 357 - 11712 14062 0 3 931,820,566, 0,947,1784, -,-,-, 639023 Satellite W-chromosome 585 chrUn_NT_466359v1 14147 15492 GGXHOI 351 - 14147 15492 0 3 154,785,349, 0,195,996, -,-,-, 639024 Satellite W-chromosome 585 chrUn_NT_466361v1 963 1324 GGCAN 864 + 963 1324 0 2 212,82, 0,279, +,+, 639038 Unknown Unknown 585 chrUn_NT_466361v1 11301 14036 CR1-Y 470 + 11301 14036 0 2 177,2066, 0,669, +,+, 639044 LINE CR1 585 chrUn_NT_466364v1 130 1009 (CAAGG)n 503 + 130 1009 0 3 187,374,256, 0,230,623, +,+,+, 639093 Simple_repeat Simple_repeat 585 chrUn_NT_466364v1 1058 1327 (TGCCT)n 290 + 1058 1327 0 2 61,146, 0,123, +,+, 639094 Simple_repeat Simple_repeat 585 chrUn_NT_466364v1 3883 4940 GGXHOI 312 + 3883 4940 0 2 441,596, 0,461, +,+, 639102 Satellite W-chromosome 585 chrUn_NT_466365v1 5887 11763 GGXHOI 436 - 5887 11763 0 3 1746,1881,2221, 0,1763,3655, -,-,-, 639118 Satellite W-chromosome 585 chrUn_NT_466365v1 11913 12725 GGXHOI 386 - 11913 12725 0 2 426,355, 0,457, -,-, 639119 Satellite W-chromosome 585 chrUn_NT_466365v1 12967 13695 GGXHOI 352 - 12967 13695 0 3 220,155,280, 0,278,448, -,-,-, 639120 Satellite W-chromosome 585 chrUn_NT_466365v1 14384 15484 GGXHOI 373 - 14384 15484 0 3 191,305,551, 0,211,549, -,-,-, 639122 Satellite W-chromosome 585 chrUn_NT_466366v1 4936 5557 CR1-H 676 - 4936 5557 0 2 139,476, 0,145, -,-, 639126 LINE CR1 585 chrUn_NT_466366v1 8622 9078 CR1-H 673 - 8622 9078 0 2 163,293, 0,163, -,-, 639131 LINE CR1 585 chrUn_NT_466367v1 1175 1799 CR1-H 378 - 1175 1799 0 2 379,209, 0,415, -,-, 639138 LINE CR1 585 chrUn_NT_466367v1 3680 4304 CR1-H 378 - 3680 4304 0 2 379,209, 0,415, -,-, 639141 LINE CR1 585 chrUn_NT_466367v1 4322 5467 CR1-C2 686 + 4322 5467 0 2 133,86, 0,1059, +,+, 639142 LINE CR1 585 chrUn_NT_466367v1 8403 9656 Char12Mar1_GG 592 - 8403 9656 0 2 121,581, 0,672, -,-, 639146 DNA hAT-Charlie 585 chrUn_NT_466367v1 12107 12729 CR1-H 368 - 12107 12729 0 2 378,208, 0,414, -,-, 639149 LINE CR1 585 chrUn_NT_466367v1 12747 13878 CR1-C2 588 + 12747 13878 0 2 133,81, 0,1050, +,+, 639150 LINE CR1 585 chrUn_NT_466367v1 15299 15507 CR1-F2 261 + 15299 15507 0 2 48,84, 0,124, +,+, 639154 LINE CR1 585 chrUn_NT_466368v1 12452 15494 GGXHOI 358 - 12452 15494 0 3 973,1289,721, 0,1015,2321, -,-,-, 639166 Satellite W-chromosome 585 chrUn_NT_466371v1 465 1327 GGXHOI 449 - 465 1327 0 3 102,234,492, 0,121,370, -,-,-, 639178 Satellite W-chromosome 585 chrUn_NT_466371v1 1566 4447 GGXHOI 442 - 1566 4447 0 3 655,247,1688, 0,697,1193, -,-,-, 639179 Satellite W-chromosome 585 chrUn_NT_466371v1 4553 4915 GGXHOI 354 - 4553 4915 0 2 151,198, 0,164, -,-, 639180 Satellite W-chromosome 585 chrUn_NT_466371v1 5117 6872 GGXHOI 426 - 5117 6872 0 2 1288,430, 0,1325, -,-, 639181 Satellite W-chromosome 585 chrUn_NT_466371v1 7786 9841 GGXHOI 416 - 7786 9841 0 3 409,1285,288, 0,461,1767, -,-,-, 639184 Satellite W-chromosome 585 chrUn_NT_466371v1 10656 12989 GGXHOI 437 - 10656 12989 0 5 474,167,525,161,894, 0,493,690,1250,1439, -,-,-,-,-, 639186 Satellite W-chromosome 585 chrUn_NT_466371v1 13531 14223 GGXHOI 352 - 13531 14223 0 2 498,153, 0,539, -,-, 639188 Satellite W-chromosome 585 chrUn_NT_466372v1 412 2640 GGXHOI 387 - 412 2640 0 2 1080,1085, 0,1143, -,-, 639192 Satellite W-chromosome 585 chrUn_NT_466372v1 7448 8759 GGXHOI 291 - 7448 8759 0 2 125,1152, 0,159, -,-, 639198 Satellite W-chromosome 585 chrUn_NT_466372v1 8939 10483 GGXHOI 378 - 8939 10483 0 2 1009,472, 0,1072, -,-, 639199 Satellite W-chromosome 585 chrUn_NT_466372v1 10581 11631 GGXHOI 378 - 10581 11631 0 2 515,472, 0,578, -,-, 639200 Satellite W-chromosome 585 chrUn_NT_466372v1 11730 12779 GGXHOI 377 - 11730 12779 0 2 514,472, 0,577, -,-, 639201 Satellite W-chromosome 585 chrUn_NT_466372v1 14026 15077 GGXHOI 377 - 14026 15077 0 2 516,472, 0,579, -,-, 639204 Satellite W-chromosome 585 chrUn_NT_466373v1 12303 13645 GGLTR7-int 361 - 12303 13645 0 3 266,231,62, 0,1047,1280, -,-,-, 639217 LTR ERV1 585 chrUn_NT_466373v1 13646 15489 GGERVL-B-int 739 - 13646 15489 0 3 744,1057,42, 0,744,1801, -,-,-, 639218 LTR ERVL 585 chrUn_NT_466375v1 10987 11320 CR1-C4 627 + 10987 11320 0 2 50,63, 0,270, +,+, 639224 LINE CR1 585 chrUn_NT_466375v1 13711 13816 (C)n 767 + 13711 13816 0 2 24,23, 0,82, +,+, 639230 Simple_repeat Simple_repeat 585 chrUn_NT_466376v1 2380 5178 GGXHOI 355 - 2380 5178 0 5 218,537,1438,131,395, 0,252,806,2261,2403, -,-,-,-,-, 639236 Satellite W-chromosome 585 chrUn_NT_466376v1 5258 6411 GGXHOI 257 - 5258 6411 0 5 140,217,292,194,184, 0,180,453,760,969, -,-,-,-,-, 639237 Satellite W-chromosome 585 chrUn_NT_466376v1 6604 8648 GGXHOI 376 - 6604 8648 0 2 1690,291, 0,1753, -,-, 639238 Satellite W-chromosome 585 chrUn_NT_466376v1 10670 15465 GGXHOI 350 - 10670 15465 0 5 552,673,501,2092,878, 0,604,1289,1814,3917, -,-,-,-,-, 639240 Satellite W-chromosome 585 chrUn_NT_466377v1 13552 15478 GGXHOI 402 + 13552 15478 0 4 434,303,297,827, 0,450,764,1099, +,+,+,+, 639250 Satellite W-chromosome 585 chrUn_NT_466378v1 13023 13367 CR1-F2 413 + 13023 13367 0 2 42,243, 0,101, +,+, 639260 LINE CR1 585 chrUn_NT_466379v1 1651 2278 CR1-H 692 + 1651 2278 0 2 469,139, 0,488, +,+, 639264 LINE CR1 585 chrUn_NT_466380v1 1380 1788 (CGAGG)n 512 + 1380 1788 0 2 179,178, 0,230, +,+, 639286 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 2304 3182 (CGAGG)n 542 + 2304 3182 0 2 668,179, 0,699, +,+, 639290 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 3287 4624 (CGAGG)n 538 + 3287 4624 0 3 736,216,184, 0,913,1153, +,+,+, 639292 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 6475 7184 (CGAGG)n 537 + 6475 7184 0 2 510,177, 0,532, +,+, 639305 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 7929 9657 (CGAGG)n 512 + 7929 9657 0 4 389,113,213,813, 0,409,702,915, +,+,+,+, 639312 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 9743 10573 (CGAGG)n 510 + 9743 10573 0 2 568,86, 0,744, +,+, 639315 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 12706 13579 (CGAGG)n 497 + 12706 13579 0 2 359,497, 0,376, +,+, 639324 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 13674 14082 (CGAGG)n 566 + 13674 14082 0 2 184,184, 0,224, +,+, 639325 Simple_repeat Simple_repeat 585 chrUn_NT_466380v1 14159 14863 (CGAGG)n 520 + 14159 14863 0 2 178,491, 0,213, +,+, 639326 Simple_repeat Simple_repeat 585 chrUn_NT_466381v1 3786 3836 (TCCC)n 516 + 3786 3836 0 2 13,14, 0,36, +,+, 639338 Simple_repeat Simple_repeat 585 chrUn_NT_466382v1 10471 13437 GGLTR7-int 416 + 10471 13437 0 4 116,1605,893,241, 0,116,1815,2725, +,+,+,+, 639378 LTR ERV1 585 chrUn_NT_466383v1 11439 13444 GGXHOI 361 - 11439 13444 0 3 1226,459,277, 0,1247,1728, -,-,-, 639391 Satellite W-chromosome 585 chrUn_NT_466383v1 13765 15467 GGXHOI 389 - 13765 15467 0 2 968,716, 0,986, -,-, 639392 Satellite W-chromosome 585 chrUn_NT_466384v1 11761 14173 GGLTR3F2 632 + 11761 14173 0 3 234,211,1919, 0,280,493, +,+,+, 639407 LTR ERVL 585 chrUn_NT_466385v1 861 3211 GGLTR7-int 580 - 861 3211 0 2 788,243, 0,2107, -,-, 639412 LTR ERV1 585 chrUn_NT_466386v1 3267 3706 (CGAGG)n 609 + 3267 3706 0 2 347,56, 0,383, +,+, 639436 Simple_repeat Simple_repeat 585 chrUn_NT_466386v1 6597 7148 (CGAGG)n 530 + 6597 7148 0 2 344,170, 0,381, +,+, 639450 Simple_repeat Simple_repeat 585 chrUn_NT_466386v1 9939 10506 (CGAGG)n 505 + 9939 10506 0 2 182,350, 0,217, +,+, 639457 Simple_repeat Simple_repeat 585 chrUn_NT_466386v1 10667 11362 (CGAGG)n 470 + 10667 11362 0 3 181,273,167, 0,201,528, +,+,+, 639459 Simple_repeat Simple_repeat 585 chrUn_NT_466386v1 11377 11763 (GGCGA)n 400 + 11377 11763 0 2 278,67, 0,319, +,+, 639460 Simple_repeat Simple_repeat 585 chrUn_NT_466386v1 11773 13091 (CGAGG)n 510 + 11773 13091 0 2 232,908, 0,410, +,+, 639462 Simple_repeat Simple_repeat 585 chrUn_NT_466386v1 14785 15320 (CGAGG)n 515 + 14785 15320 0 2 180,355, 0,180, +,+, 639472 Simple_repeat Simple_repeat 585 chrUn_NT_466387v1 2016 2531 (CAGGC)n 488 + 2016 2531 0 2 225,116, 0,399, +,+, 639480 Simple_repeat Simple_repeat 585 chrUn_NT_466387v1 2921 3497 (CAAGG)n 626 + 2921 3497 0 2 362,214, 0,362, +,+, 639484 Simple_repeat Simple_repeat 585 chrUn_NT_466387v1 8973 9373 G-rich 344 + 8973 9373 0 2 121,243, 0,157, +,+, 639491 Low_complexity Low_complexity 585 chrUn_NT_466387v1 13209 14598 GGLTR7-int 297 - 13209 14598 0 3 279,288,100, 0,975,1289, -,-,-, 639496 LTR ERV1 585 chrUn_NT_466390v1 8603 9482 CR1-F0 853 - 8603 9482 0 2 144,735, 0,144, -,-, 639509 LINE CR1 585 chrUn_NT_466390v1 9496 10399 (CCTTG)n 572 + 9496 10399 0 3 320,21,165, 0,498,738, +,+,+, 639510 Simple_repeat Simple_repeat 585 chrUn_NT_466390v1 10320 10680 (GCCTG)n 530 + 10320 10680 0 2 96,85, 0,275, +,+, 639513 Simple_repeat Simple_repeat 585 chrUn_NT_466390v1 11577 12004 GGLTR7A 873 + 11577 12004 0 2 173,254, 0,173, +,+, 639520 LTR ERV1 585 chrUn_NT_466390v1 12534 13575 GGLTR7A 774 + 12534 13575 0 2 455,585, 0,456, +,+, 639522 LTR ERV1 585 chrUn_NT_466392v1 5597 6012 CR1-H 733 - 5597 6012 0 2 318,97, 0,318, -,-, 639565 LINE CR1 585 chrUn_NT_466393v1 1863 4300 GGXHOI 369 - 1863 4300 0 3 558,1541,267, 0,585,2170, -,-,-, 639574 Satellite W-chromosome 585 chrUn_NT_466393v1 5128 15423 GGXHOI 385 - 5128 15423 0 7 1857,5025,735,174,695,1461,223, 0,1870,6910,7665,7868,8577,10072, -,-,-,-,-,-,-, 639576 Satellite W-chromosome 585 chrUn_NT_466394v1 1920 2759 GGXHOI 350 - 1920 2759 0 2 654,163, 0,676, -,-, 639578 Satellite W-chromosome 585 chrUn_NT_466394v1 2833 3550 GGXHOI 380 - 2833 3550 0 2 499,176, 0,541, -,-, 639579 Satellite W-chromosome 585 chrUn_NT_466394v1 3805 9217 GGXHOI 397 - 3805 9217 0 3 2252,2470,640, 0,2263,4772, -,-,-, 639580 Satellite W-chromosome 585 chrUn_NT_466395v1 9672 12615 GGXHOI 311 - 9672 12615 0 4 364,2202,140,160, 0,388,2602,2783, -,-,-,-, 639590 Satellite W-chromosome 585 chrUn_NT_466396v1 376 831 GGXHOI 303 + 376 831 0 2 335,106, 0,349, +,+, 639593 Satellite W-chromosome 585 chrUn_NT_466396v1 2954 4019 GGXHOI 376 + 2954 4019 0 3 211,268,552, 0,228,513, +,+,+, 639597 Satellite W-chromosome 585 chrUn_NT_466396v1 4160 6793 GGXHOI 377 + 4160 6793 0 3 760,956,842, 0,818,1791, +,+,+, 639598 Satellite W-chromosome 585 chrUn_NT_466396v1 8209 9093 GGXHOI 403 + 8209 9093 0 2 515,352, 0,532, +,+, 639601 Satellite W-chromosome 585 chrUn_NT_466396v1 9274 11389 GGXHOI 402 + 9274 11389 0 4 843,268,762,147, 0,863,1189,1968, +,+,+,+, 639602 Satellite W-chromosome 585 chrUn_NT_466396v1 14519 15424 GGXHOI 363 + 14519 15424 0 2 433,453, 0,452, +,+, 639605 Satellite W-chromosome 585 chrUn_NT_466397v1 2703 3440 (ACCCATTGGG)n 589 + 2703 3440 0 3 238,307,118, 0,260,619, +,+,+, 639609 Satellite Satellite 585 chrUn_NT_466397v1 3849 4209 (CAATG)n 554 + 3849 4209 0 2 142,57, 0,303, +,+, 639611 Simple_repeat Simple_repeat 585 chrUn_NT_466397v1 10161 10633 (ACCCCATAGGG)n 337 + 10161 10633 0 2 127,295, 0,177, +,+, 639615 Satellite Satellite 585 chrUn_NT_466398v1 1401 15431 GGXHOI 384 - 1401 15431 0 15 1061,887,701,1172,218,137,1165,2559,528,142,664,3350,844,133,106, 0,1079,2021,2739,3927,4159,4312,5494,8096,8646,8800,9527,12889,13751,13924, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 639621 Satellite W-chromosome 585 chrUn_NT_466399v1 13517 13660 GA-rich 276 + 13517 13660 0 2 43,67, 0,76, +,+, 639641 Low_complexity Low_complexity 585 chrUn_NT_466399v1 14994 15137 GA-rich 292 + 14994 15137 0 2 43,67, 0,76, +,+, 639644 Low_complexity Low_complexity 585 chrUn_NT_466400v1 3971 6616 GGXHOI 385 - 3971 6616 0 4 289,605,429,1250, 0,329,946,1395, -,-,-,-, 639647 Satellite W-chromosome 585 chrUn_NT_466400v1 6785 7136 GGXHOI 359 - 6785 7136 0 2 141,151, 0,200, -,-, 639648 Satellite W-chromosome 585 chrUn_NT_466400v1 7417 11423 GGXHOI 422 - 7417 11423 0 5 835,144,1429,64,1475, 0,846,1003,2452,2531, -,-,-,-,-, 639649 Satellite W-chromosome 585 chrUn_NT_466400v1 11521 15406 GGXHOI 410 - 11521 15406 0 5 673,1493,1054,404,164, 0,690,2198,3271,3721, -,-,-,-,-, 639650 Satellite W-chromosome 585 chrUn_NT_466401v1 1149 13796 GGXHOI 535 - 1149 13796 0 24 17,306,188,180,351,190,272,455,194,199,194,300,194,300,193,300,194,300,194,299,193,294,238,619, 0,335,827,1048,1239,1920,2162,2782,3548,4155,4677,5182,5805,6308,6930,7434,8055,8560,9183,9688,10310,10815,11431,12028, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 639653 Satellite W-chromosome 585 chrUn_NT_466401v1 14449 15168 GGXHOI 542 - 14449 15168 0 2 427,90, 0,629, -,-, 639675 Satellite W-chromosome 585 chrUn_NT_466403v1 4620 7486 GGERVL-B-int 698 + 4620 7486 0 2 1949,917, 0,1949, +,+, 639703 LTR ERVL 585 chrUn_NT_466403v1 8226 9628 GGLTR7-int 347 + 8226 9628 0 3 102,235,280, 0,128,1122, +,+,+, 639705 LTR ERV1 585 chrUn_NT_466404v1 401 804 (CAAGG)n 588 + 401 804 0 2 172,231, 0,172, +,+, 639709 Simple_repeat Simple_repeat 585 chrUn_NT_466404v1 1080 1489 (CAAGG)n 502 + 1080 1489 0 2 190,219, 0,190, +,+, 639711 Simple_repeat Simple_repeat 585 chrUn_NT_466406v1 1087 3538 GGXHOI 396 + 1087 3538 0 5 261,1031,752,124,169, 0,277,1325,2135,2282, +,+,+,+,+, 639741 Satellite W-chromosome 585 chrUn_NT_466406v1 3616 6270 GGXHOI 389 + 3616 6270 0 4 836,666,880,174, 0,860,1549,2480, +,+,+,+, 639742 Satellite W-chromosome 585 chrUn_NT_466406v1 6491 11455 GGXHOI 389 + 6491 11455 0 6 750,558,1327,919,228,1071, 0,766,1341,2685,3621,3893, +,+,+,+,+,+, 639743 Satellite W-chromosome 585 chrUn_NT_466406v1 11583 14170 GGXHOI 386 + 11583 14170 0 4 219,665,800,792, 0,241,967,1795, +,+,+,+, 639744 Satellite W-chromosome 585 chrUn_NT_466406v1 14496 15322 GGXHOI 418 + 14496 15322 0 2 424,379, 0,447, +,+, 639745 Satellite W-chromosome 585 chrUn_NT_466407v1 8776 12781 GGXHOI 585 - 8776 12781 0 7 25,403,432,432,52,201,148, 0,695,1339,2456,3577,3645,3857, -,-,-,-,-,-,-, 639755 Satellite W-chromosome 585 chrUn_NT_466408v1 973 2135 GGXHOI 367 + 973 2135 0 3 553,192,376, 0,582,786, +,+,+, 639766 Satellite W-chromosome 585 chrUn_NT_466408v1 2323 8021 GGXHOI 362 + 2323 8021 0 3 3282,1725,567, 0,3343,5131, +,+,+, 639767 Satellite W-chromosome 585 chrUn_NT_466408v1 10598 10951 GGXHOI 354 + 10598 10951 0 2 187,136, 0,217, +,+, 639772 Satellite W-chromosome 585 chrUn_NT_466408v1 11117 12946 GGXHOI 328 + 11117 12946 0 5 283,103,70,417,835, 0,333,465,555,994, +,+,+,+,+, 639773 Satellite W-chromosome 585 chrUn_NT_466408v1 13235 15381 GGXHOI 355 + 13235 15381 0 2 902,1223, 0,923, +,+, 639776 Satellite W-chromosome 585 chrUn_NT_466409v1 8358 10120 GGERVL-A-int 756 + 8358 10120 0 2 457,1305, 0,457, +,+, 639779 LTR ERVL 585 chrUn_NT_466410v1 3355 4276 (CCTTG)n 567 + 3355 4276 0 3 146,42,554, 0,325,367, +,+,+, 639792 Simple_repeat Simple_repeat 585 chrUn_NT_466410v1 4011 4511 (GCCTG)n 442 + 4011 4511 0 2 297,26, 0,474, +,+, 639794 Simple_repeat Simple_repeat 585 chrUn_NT_466410v1 5541 5885 (GCCTG)n 506 + 5541 5885 0 2 90,72, 0,272, +,+, 639799 Simple_repeat Simple_repeat 585 chrUn_NT_466410v1 8677 11119 GGERVL-B-int 695 + 8677 11119 0 4 92,183,1194,910, 0,118,338,1532, +,+,+,+, 639807 LTR ERVL 585 chrUn_NT_466410v1 11840 13218 GGLTR7-int 306 + 11840 13218 0 3 101,288,277, 0,127,1101, +,+,+, 639810 LTR ERV1 585 chrUn_NT_466411v1 2381 7296 GGXHOI 408 - 2381 7296 0 6 1116,647,855,1686,146,338, 0,1168,1830,2721,4420,4577, -,-,-,-,-,-, 639813 Satellite W-chromosome 585 chrUn_NT_466411v1 7381 8374 GGXHOI 392 - 7381 8374 0 2 644,338, 0,655, -,-, 639814 Satellite W-chromosome 585 chrUn_NT_466411v1 8789 9247 GGXHOI 405 - 8789 9247 0 2 152,291, 0,167, -,-, 639815 Satellite W-chromosome 585 chrUn_NT_466411v1 9331 11888 GGXHOI 405 - 9331 11888 0 4 1532,502,146,336, 0,1550,2064,2221, -,-,-,-, 639816 Satellite W-chromosome 585 chrUn_NT_466411v1 11972 13605 GGXHOI 362 - 11972 13605 0 2 535,1050, 0,583, -,-, 639817 Satellite W-chromosome 585 chrUn_NT_466411v1 13685 15284 GGXHOI 425 - 13685 15284 0 3 489,147,939, 0,502,660, -,-,-, 639818 Satellite W-chromosome 585 chrUn_NT_466412v1 13452 15383 GGLTR7-int 576 + 13452 15383 0 5 346,214,256,149,243, 0,835,1230,1494,1688, +,+,+,+,+, 639830 LTR ERV1 585 chrUn_NT_466413v1 1352 1681 (GCCTG)n 430 + 1352 1681 0 2 108,39, 0,290, +,+, 639837 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 2715 3370 (CCTTG)n 493 + 2715 3370 0 3 238,203,182, 0,238,473, +,+,+, 639845 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 3402 3787 (CCTTG)n 528 + 3402 3787 0 2 123,82, 0,303, +,+, 639847 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 4163 5231 (CAAGG)n 492 + 4163 5231 0 2 464,431, 0,637, +,+, 639850 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 5585 6136 (CCTTG)n 497 + 5585 6136 0 3 179,124,19, 0,224,532, +,+,+, 639853 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 6493 7780 (CAAGG)n 510 + 6493 7780 0 5 352,179,380,142,25, 0,377,556,936,1262, +,+,+,+,+, 639857 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 7799 8638 (CCTTG)n 499 + 7799 8638 0 3 49,578,177, 0,71,662, +,+,+, 639859 Simple_repeat Simple_repeat 585 chrUn_NT_466413v1 8675 9808 GGXHOI 340 - 8675 9808 0 2 274,802, 0,331, -,-, 639860 Satellite W-chromosome 585 chrUn_NT_466413v1 9906 11530 GGXHOI 383 - 9906 11530 0 3 683,597,265, 0,741,1359, -,-,-, 639861 Satellite W-chromosome 585 chrUn_NT_466414v1 1702 7755 GGXHOI 357 - 1702 7755 0 5 2077,877,881,339,1782, 0,2094,2994,3898,4271, -,-,-,-,-, 639868 Satellite W-chromosome 585 chrUn_NT_466414v1 7833 9756 GGXHOI 313 - 7833 9756 0 3 134,1557,132, 0,197,1791, -,-,-, 639869 Satellite W-chromosome 585 chrUn_NT_466414v1 10017 15332 GGXHOI 398 - 10017 15332 0 7 1193,1230,150,712,350,725,839, 0,1215,2463,2628,3363,3728,4476, -,-,-,-,-,-,-, 639870 Satellite W-chromosome 585 chrUn_NT_466415v1 5827 6830 CR1-H 708 + 5827 6830 0 2 276,727, 0,276, +,+, 639878 LINE CR1 585 chrUn_NT_466415v1 8587 9208 CR1-H 670 + 8587 9208 0 2 476,139, 0,482, +,+, 639880 LINE CR1 585 chrUn_NT_466416v1 3048 3868 CR1-X2 553 - 3048 3868 0 2 479,200, 0,620, -,-, 639888 LINE CR1 585 chrUn_NT_466416v1 9492 13939 CR1-Y2_Aves 326 - 9492 13939 0 3 583,565,295, 0,3586,4152, -,-,-, 639891 LINE CR1 585 chrUn_NT_466418v1 3160 3829 GGXHOI 347 - 3160 3829 0 2 306,305, 0,364, -,-, 639914 Satellite W-chromosome 585 chrUn_NT_466418v1 3928 6349 GGXHOI 346 - 3928 6349 0 2 2017,344, 0,2077, -,-, 639915 Satellite W-chromosome 585 chrUn_NT_466418v1 6445 7944 GGXHOI 335 - 6445 7944 0 3 560,386,433, 0,622,1066, -,-,-, 639916 Satellite W-chromosome 585 chrUn_NT_466418v1 8042 10544 GGXHOI 347 - 8042 10544 0 3 886,326,1189, 0,945,1313, -,-,-, 639917 Satellite W-chromosome 585 chrUn_NT_466418v1 10647 12582 GGXHOI 330 - 10647 12582 0 2 427,1446, 0,489, -,-, 639918 Satellite W-chromosome 585 chrUn_NT_466419v1 675 4677 GGXHOI 412 - 675 4677 0 3 2353,471,1135, 0,2378,2867, -,-,-, 639922 Satellite W-chromosome 585 chrUn_NT_466419v1 4754 8112 GGXHOI 408 - 4754 8112 0 4 1856,667,214,561, 0,1877,2562,2797, -,-,-,-, 639923 Satellite W-chromosome 585 chrUn_NT_466419v1 8209 8713 GGXHOI 374 - 8209 8713 0 2 136,324, 0,180, -,-, 639924 Satellite W-chromosome 585 chrUn_NT_466419v1 8791 9489 GGXHOI 363 - 8791 9489 0 2 347,313, 0,385, -,-, 639925 Satellite W-chromosome 585 chrUn_NT_466419v1 11065 14225 GGXHOI 393 - 11065 14225 0 3 486,1082,1500, 0,537,1660, -,-,-, 639929 Satellite W-chromosome 585 chrUn_NT_466419v1 14302 15364 GGXHOI 424 - 14302 15364 0 2 388,660, 0,402, -,-, 639930 Satellite W-chromosome 585 chrUn_NT_466420v1 1178 3425 CR1-C 669 + 1178 3425 0 2 1742,426, 0,1821, +,+, 639932 LINE CR1 585 chrUn_NT_466420v1 5666 10268 CR1-H 549 + 5666 10268 0 2 2357,835, 0,3767, +,+, 639934 LINE CR1 585 chrUn_NT_466420v1 13289 15088 Z-REP 456 + 13289 15088 0 2 284,1224, 0,575, +,+, 639939 Satellite macro 585 chrUn_NT_466421v1 1841 15306 GGXHOI 398 - 1841 15306 0 14 157,843,895,979,978,978,979,979,979,979,977,978,1957,526, 0,195,1061,1976,2975,3973,4971,5970,6969,7968,8967,9964,10962,12939, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 639941 Satellite W-chromosome 585 chrUn_NT_466423v1 5130 7109 GGXHOI 384 - 5130 7109 0 2 512,1449, 0,530, -,-, 639959 Satellite W-chromosome 585 chrUn_NT_466423v1 7208 8831 GGXHOI 388 - 7208 8831 0 2 516,1045, 0,578, -,-, 639960 Satellite W-chromosome 585 chrUn_NT_466423v1 9476 10527 GGXHOI 378 - 9476 10527 0 2 516,472, 0,579, -,-, 639962 Satellite W-chromosome 585 chrUn_NT_466423v1 10626 11535 GGXHOI 353 - 10626 11535 0 2 375,472, 0,437, -,-, 639963 Satellite W-chromosome 585 chrUn_NT_466423v1 12227 14040 GGXHOI 381 - 12227 14040 0 2 1038,714, 0,1099, -,-, 639965 Satellite W-chromosome 585 chrUn_NT_466424v1 5712 9606 GGXHOI 404 + 5712 9606 0 3 1532,1009,1306, 0,1553,2588, +,+,+, 639973 Satellite W-chromosome 585 chrUn_NT_466424v1 10546 13110 GGXHOI 414 + 10546 13110 0 4 1236,950,142,148, 0,1282,2254,2416, +,+,+,+, 639975 Satellite W-chromosome 585 chrUn_NT_466424v1 14019 14528 GGXHOI 375 + 14019 14528 0 2 182,315, 0,194, +,+, 639977 Satellite W-chromosome 585 chrUn_NT_466425v1 2134 3542 GGXHOI 555 - 2134 3542 0 2 719,667, 0,741, -,-, 639981 Satellite W-chromosome 585 chrUn_NT_466425v1 4936 7999 Sat-CR1_GG 174 - 4936 7999 0 3 297,44,687, 0,2170,2376, -,-,-, 639984 Satellite Satellite 585 chrUn_NT_466425v1 8546 15332 GGXHOI 566 - 8546 15332 0 8 610,209,330,208,328,209,210,126, 0,860,2257,2966,3676,5156,5896,6660, -,-,-,-,-,-,-,-, 639989 Satellite W-chromosome 585 chrUn_NT_466426v1 3706 5096 GGLTR7-int 286 - 3706 5096 0 3 281,312,100, 0,977,1290, -,-,-, 640000 LTR ERV1 585 chrUn_NT_466426v1 5833 8681 GGERVL-B-int 707 - 5833 8681 0 2 919,1929, 0,919, -,-, 640003 LTR ERVL 585 chrUn_NT_466426v1 11039 12087 GGLTR7A 762 - 11039 12087 0 2 585,461, 0,587, -,-, 640007 LTR ERV1 585 chrUn_NT_466426v1 12613 13041 GGLTR7A 863 - 12613 13041 0 2 253,175, 0,253, -,-, 640009 LTR ERV1 585 chrUn_NT_466426v1 13038 13543 (CAAGG)n 487 + 13038 13543 0 3 44,39,196, 0,230,309, +,+,+, 640010 Simple_repeat Simple_repeat 585 chrUn_NT_466426v1 14522 14899 (CAAGG)n 594 + 14522 14899 0 2 111,99, 0,278, +,+, 640017 Simple_repeat Simple_repeat 585 chrUn_NT_466427v1 11802 12461 GGLTR11-int 366 + 11802 12461 0 2 125,358, 0,301, +,+, 640030 LTR ERV1 585 chrUn_NT_466429v1 3418 4468 GGXHOI 392 + 3418 4468 0 2 472,515, 0,535, +,+, 640047 Satellite W-chromosome 585 chrUn_NT_466429v1 4568 5619 GGXHOI 392 + 4568 5619 0 2 472,516, 0,535, +,+, 640048 Satellite W-chromosome 585 chrUn_NT_466429v1 5718 6769 GGXHOI 392 + 5718 6769 0 2 472,516, 0,535, +,+, 640049 Satellite W-chromosome 585 chrUn_NT_466429v1 8594 9520 GGXHOI 380 + 8594 9520 0 2 276,633, 0,293, +,+, 640052 Satellite W-chromosome 585 chrUn_NT_466429v1 10425 10839 (CAAGG)n 492 + 10425 10839 0 2 178,200, 0,214, +,+, 640057 Simple_repeat Simple_repeat 585 chrUn_NT_466429v1 11010 12001 (CCTTG)n 494 + 11010 12001 0 2 377,586, 0,405, +,+, 640059 Simple_repeat Simple_repeat 585 chrUn_NT_466429v1 12805 13453 (CAAGG)n 522 + 12805 13453 0 2 374,257, 0,391, +,+, 640064 Simple_repeat Simple_repeat 585 chrUn_NT_466429v1 13775 14130 (CCTTG)n 511 + 13775 14130 0 2 153,184, 0,171, +,+, 640067 Simple_repeat Simple_repeat 585 chrUn_NT_466430v1 346 1911 GGXHOI 359 + 346 1911 0 4 229,501,214,531, 0,247,801,1034, +,+,+,+, 640075 Satellite W-chromosome 585 chrUn_NT_466430v1 2050 12434 GGXHOI 391 + 2050 12434 0 8 323,438,336,2099,832,2695,2218,1291, 0,345,797,1149,3300,4148,6859,9093, +,+,+,+,+,+,+,+, 640076 Satellite W-chromosome 585 chrUn_NT_466430v1 12535 14853 GGXHOI 354 + 12535 14853 0 2 1790,490, 0,1828, +,+, 640077 Satellite W-chromosome 585 chrUn_NT_466431v1 1376 2500 CR1-B2 576 - 1376 2500 0 2 889,232, 0,892, -,-, 640082 LINE CR1 585 chrUn_NT_466431v1 9081 9582 CR1-C 441 - 9081 9582 0 2 277,224, 0,277, -,-, 640089 LINE CR1 585 chrUn_NT_466432v1 821 5505 GGXHOI 449 - 821 5505 0 5 1424,64,1367,64,1611, 0,1444,1565,2952,3073, -,-,-,-,-, 640098 Satellite W-chromosome 585 chrUn_NT_466432v1 5573 12279 GGXHOI 418 - 5573 12279 0 5 985,433,1414,2263,1503, 0,998,1451,2920,5203, -,-,-,-,-, 640099 Satellite W-chromosome 585 chrUn_NT_466432v1 12346 15308 GGXHOI 396 - 12346 15308 0 5 932,514,750,362,291, 0,945,1516,2297,2671, -,-,-,-,-, 640100 Satellite W-chromosome 585 chrUn_NT_466433v1 14886 15292 (CTCTATGGGG)n 628 + 14886 15292 0 3 118,100,60, 0,129,346, +,+,+, 640108 Satellite Satellite 585 chrUn_NT_466434v1 735 1226 GGXHOI 346 + 735 1226 0 2 258,178, 0,313, +,+, 640111 Satellite W-chromosome 585 chrUn_NT_466434v1 1311 13870 GGXHOI 369 + 1311 13870 0 8 848,2314,540,2226,2448,1262,2239,530, 0,859,3191,3743,5981,8447,9772,12029, +,+,+,+,+,+,+,+, 640112 Satellite W-chromosome 585 chrUn_NT_466434v1 14241 15327 GGXHOI 377 + 14241 15327 0 2 875,181, 0,905, +,+, 640113 Satellite W-chromosome 585 chrUn_NT_466435v1 1448 2895 GGXHOI 375 - 1448 2895 0 2 999,385, 0,1062, -,-, 640115 Satellite W-chromosome 585 chrUn_NT_466435v1 9589 10910 GGXHOI 377 - 9589 10910 0 2 509,794, 0,527, -,-, 640127 Satellite W-chromosome 585 chrUn_NT_466435v1 11173 12448 GGXHOI 396 - 11173 12448 0 2 950,264, 0,1011, -,-, 640128 Satellite W-chromosome 585 chrUn_NT_466436v1 5524 7054 GGXHOI 383 - 5524 7054 0 3 1020,225,244, 0,1043,1286, -,-,-, 640135 Satellite W-chromosome 585 chrUn_NT_466436v1 9147 13275 GGXHOI 358 - 9147 13275 0 5 115,237,228,2241,1193, 0,140,432,679,2935, -,-,-,-,-, 640137 Satellite W-chromosome 585 chrUn_NT_466436v1 13381 15320 GGXHOI 379 - 13381 15320 0 2 764,1158, 0,781, -,-, 640138 Satellite W-chromosome 585 chrUn_NT_466437v1 12249 12688 (TCCA)n 618 + 12249 12688 0 2 204,195, 0,244, +,+, 640156 Simple_repeat Simple_repeat 585 chrUn_NT_466437v1 13794 14711 (TGGA)n 637 + 13794 14711 0 3 194,175,520, 0,205,397, +,+,+, 640160 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 1759 4221 (CGAGG)n 527 + 1759 4221 0 6 179,512,208,293,496,464, 0,230,776,1163,1476,1998, +,+,+,+,+,+, 640164 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 4540 6287 (CGAGG)n 508 + 4540 6287 0 5 350,752,213,184,179, 0,389,1141,1369,1568, +,+,+,+,+, 640166 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 8701 9244 (CGAGG)n 511 + 8701 9244 0 2 179,313, 0,230, +,+, 640176 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 9300 10535 (CGAGG)n 535 + 9300 10535 0 4 365,247,216,184, 0,386,811,1051, +,+,+,+, 640178 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 10840 11227 (CGAGG)n 596 + 10840 11227 0 2 179,177, 0,210, +,+, 640183 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 11601 12447 (CGAGG)n 428 + 11601 12447 0 2 378,445, 0,401, +,+, 640187 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 12538 13200 (CGAGG)n 536 + 12538 13200 0 2 359,281, 0,381, +,+, 640189 Simple_repeat Simple_repeat 585 chrUn_NT_466438v1 13839 14664 (CGAGG)n 477 + 13839 14664 0 3 177,184,415, 0,206,410, +,+,+, 640196 Simple_repeat Simple_repeat 585 chrUn_NT_466440v1 4439 4542 CR1-C4 648 + 4439 4542 0 2 51,51, 0,52, +,+, 640222 LINE CR1 585 chrUn_NT_466441v1 5081 15306 GGXHOI 386 - 5081 15306 0 11 851,723,1902,848,233,178,336,514,1290,1099,1943, 0,866,1632,3566,4428,4684,4894,5292,5838,7160,8282, -,-,-,-,-,-,-,-,-,-,-, 640232 Satellite W-chromosome 585 chrUn_NT_466442v1 13698 13856 G-rich 532 + 13698 13856 0 2 42,60, 0,98, +,+, 640239 Low_complexity Low_complexity 585 chrUn_NT_466442v1 14030 15302 CR1-F 848 + 14030 15302 0 2 711,544, 0,728, +,+, 640240 LINE CR1 585 chrUn_NT_466443v1 8333 9816 GGLTR7B 560 + 8333 9816 0 2 888,126, 0,1357, +,+, 640255 LTR ERV1 585 chrUn_NT_466443v1 11978 14444 CR1-C 839 + 11978 14444 0 3 420,1125,584, 0,757,1882, +,+,+, 640258 LINE CR1 585 chrUn_NT_466444v1 2236 2980 GGXHOI 270 - 2236 2980 0 2 643,90, 0,654, -,-, 640261 Satellite W-chromosome 585 chrUn_NT_466444v1 3216 9510 GGXHOI 391 - 3216 9510 0 7 2770,751,1269,485,148,317,330, 0,2826,3602,4884,5388,5591,5964, -,-,-,-,-,-,-, 640262 Satellite W-chromosome 585 chrUn_NT_466444v1 9629 10651 GGXHOI 390 - 9629 10651 0 2 638,327, 0,695, -,-, 640263 Satellite W-chromosome 585 chrUn_NT_466444v1 10736 11673 GGXHOI 409 - 10736 11673 0 2 335,577, 0,360, -,-, 640264 Satellite W-chromosome 585 chrUn_NT_466444v1 11832 14275 GGXHOI 417 - 11832 14275 0 4 561,972,146,700, 0,581,1573,1743, -,-,-,-, 640265 Satellite W-chromosome 585 chrUn_NT_466444v1 14346 15288 GGXHOI 435 - 14346 15288 0 3 144,329,391, 0,200,551, -,-,-, 640266 Satellite W-chromosome 585 chrUn_NT_466445v1 7423 8819 GGLTR7-int 343 - 7423 8819 0 3 289,236,101, 0,1033,1295, -,-,-, 640268 LTR ERV1 585 chrUn_NT_466445v1 9555 12046 GGERVL-B-int 789 - 9555 12046 0 3 918,1258,315, 0,918,2176, -,-,-, 640270 LTR ERVL 585 chrUn_NT_466446v1 2765 4250 GGXHOI 327 - 2765 4250 0 3 634,351,383, 0,692,1102, -,-,-, 640281 Satellite W-chromosome 585 chrUn_NT_466446v1 5394 7129 GGXHOI 327 - 5394 7129 0 2 444,1231, 0,504, -,-, 640284 Satellite W-chromosome 585 chrUn_NT_466446v1 8504 9717 GGXHOI 359 - 8504 9717 0 2 271,925, 0,288, -,-, 640287 Satellite W-chromosome 585 chrUn_NT_466446v1 9983 11656 GGXHOI 343 - 9983 11656 0 2 760,897, 0,776, -,-, 640288 Satellite W-chromosome 585 chrUn_NT_466446v1 12125 12657 GGXHOI 311 - 12125 12657 0 2 366,149, 0,383, -,-, 640290 Satellite W-chromosome 585 chrUn_NT_466447v1 11973 14856 GGLTR7-int 415 - 11973 14856 0 5 141,936,444,1015,113, 0,256,1286,1755,2770, -,-,-,-,-, 640303 LTR ERV1 585 chrUn_NT_466448v1 5008 6130 CR1-B2 704 + 5008 6130 0 2 223,896, 0,226, +,+, 640309 LINE CR1 585 chrUn_NT_466449v1 9847 10134 (CTCTATGGGG)n 383 - 9847 10134 0 2 134,128, 0,159, -,-, 640338 Satellite Satellite 585 chrUn_NT_466449v1 10979 11200 (CTCTATGGGG)n 520 - 10979 11200 0 2 110,88, 0,133, -,-, 640343 Satellite Satellite 585 chrUn_NT_466449v1 11524 11764 (CTCTATGGGG)n 563 - 11524 11764 0 2 107,109, 0,131, -,-, 640345 Satellite Satellite 585 chrUn_NT_466450v1 10527 12284 GGERVL-A-int 750 - 10527 12284 0 2 1301,456, 0,1301, -,-, 640357 LTR ERVL 585 chrUn_NT_466451v1 13766 14534 CR1-B2 658 - 13766 14534 0 2 543,222, 0,546, -,-, 640376 LINE CR1 585 chrUn_NT_466453v1 1637 2991 CR1-H 639 - 1637 2991 0 2 116,1238, 0,116, -,-, 640388 LINE CR1 585 chrUn_NT_466453v1 4737 4846 (TTTGC)n 326 + 4737 4846 0 2 52,8, 0,101, +,+, 640389 Simple_repeat Simple_repeat 585 chrUn_NT_466453v1 13976 14594 CR1-H 636 - 13976 14594 0 2 139,473, 0,145, -,-, 640399 LINE CR1 585 chrUn_NT_466454v1 2177 2799 CR1-H 683 + 2177 2799 0 2 477,139, 0,483, +,+, 640401 LINE CR1 585 chrUn_NT_466456v1 5278 6775 GGXHOI 384 - 5278 6775 0 3 1023,255,152, 0,1035,1345, -,-,-, 640424 Satellite W-chromosome 585 chrUn_NT_466456v1 8069 8664 GGXHOI 282 - 8069 8664 0 2 144,396, 0,199, -,-, 640427 Satellite W-chromosome 585 chrUn_NT_466456v1 10829 12725 GGXHOI 346 - 10829 12725 0 3 215,211,1390, 0,237,506, -,-,-, 640430 Satellite W-chromosome 585 chrUn_NT_466456v1 13351 14485 GGXHOI 401 - 13351 14485 0 2 959,152, 0,982, -,-, 640432 Satellite W-chromosome 585 chrUn_NT_466456v1 14597 15256 GGXHOI 356 - 14597 15256 0 2 245,351, 0,308, -,-, 640433 Satellite W-chromosome 585 chrUn_NT_466457v1 14245 14654 (CCTTG)n 539 + 14245 14654 0 2 187,172, 0,237, +,+, 640461 Simple_repeat Simple_repeat 585 chrUn_NT_466458v1 11318 11676 (GCATG)n 466 + 11318 11676 0 2 119,55, 0,303, +,+, 640480 Simple_repeat Simple_repeat 585 chrUn_NT_466458v1 11782 12260 (GCATG)n 472 + 11782 12260 0 2 187,278, 0,200, +,+, 640484 Simple_repeat Simple_repeat 585 chrUn_NT_466459v1 1943 3563 GGXHOI 379 - 1943 3563 0 2 1085,472, 0,1148, -,-, 640492 Satellite W-chromosome 585 chrUn_NT_466459v1 4810 5861 GGXHOI 378 - 4810 5861 0 2 516,472, 0,579, -,-, 640495 Satellite W-chromosome 585 chrUn_NT_466459v1 5960 7011 GGXHOI 378 - 5960 7011 0 2 516,472, 0,579, -,-, 640496 Satellite W-chromosome 585 chrUn_NT_466460v1 1208 1611 (CTCTATGGGG)n 594 - 1208 1611 0 2 215,54, 0,349, -,-, 640512 Satellite Satellite 585 chrUn_NT_466461v1 5878 6296 (CTCTATGGGG)n 745 + 5878 6296 0 3 163,81,30, 0,174,388, +,+,+, 640530 Satellite Satellite 585 chrUn_NT_466461v1 6431 7189 (CTCTATGGGG)n 668 - 6431 7189 0 4 174,237,61,164, 0,174,533,594, -,-,-,-, 640532 Satellite Satellite 585 chrUn_NT_466461v1 7309 7609 (CTCTATGGGG)n 694 - 7309 7609 0 2 156,144, 0,156, -,-, 640534 Satellite Satellite 585 chrUn_NT_466461v1 7767 8337 (CTCTATGGGG)n 711 - 7767 8337 0 3 139,109,194, 0,160,376, -,-,-, 640535 Satellite Satellite 585 chrUn_NT_466461v1 8670 9404 (CTCTATGGGG)n 690 - 8670 9404 0 4 139,227,61,164, 0,160,509,570, -,-,-,-, 640539 Satellite Satellite 585 chrUn_NT_466461v1 9557 10133 (CTCTATGGGG)n 708 + 9557 10133 0 2 421,32, 0,544, +,+, 640541 Satellite Satellite 585 chrUn_NT_466461v1 10250 10747 (CTCTATGGGG)n 732 - 10250 10747 0 2 138,359, 0,138, -,-, 640543 Satellite Satellite 585 chrUn_NT_466461v1 11429 11753 (CTCTATGGGG)n 754 - 11429 11753 0 2 142,176, 0,148, -,-, 640549 Satellite Satellite 585 chrUn_NT_466461v1 11733 12241 (ACCCCATAGGG)n 466 - 11733 12241 0 2 258,116, 0,392, -,-, 640550 Satellite Satellite 585 chrUn_NT_466461v1 14188 14419 (CTCTATGGGG)n 610 + 14188 14419 0 2 61,50, 0,181, +,+, 640558 Satellite Satellite 585 chrUn_NT_466463v1 7196 15233 GGXHOI 570 + 7196 15233 0 4 793,3319,1512,1519, 0,1044,4685,6518, +,+,+,+, 640568 Satellite W-chromosome 585 chrUn_NT_466464v1 2592 2883 (CTCTATGGGG)n 620 + 2592 2883 0 2 118,117, 0,174, +,+, 640572 Satellite Satellite 585 chrUn_NT_466464v1 3199 4505 (CTCTATGGGG)n 587 + 3199 4505 0 7 239,124,238,119,123,118,120, 0,260,441,693,867,1024,1186, +,+,+,+,+,+,+, 640574 Satellite Satellite 585 chrUn_NT_466465v1 462 13336 GGXHOI 432 + 462 13336 0 8 141,1605,2915,470,986,2925,2317,1317, 0,169,1789,4719,5218,6221,9193,11557, +,+,+,+,+,+,+,+, 640587 Satellite W-chromosome 585 chrUn_NT_466465v1 13568 14470 GGXHOI 398 + 13568 14470 0 3 144,527,193, 0,167,709, +,+,+, 640588 Satellite W-chromosome 585 chrUn_NT_466466v1 2080 3144 GGXHOI 340 - 2080 3144 0 2 738,309, 0,755, -,-, 640594 Satellite W-chromosome 585 chrUn_NT_466466v1 3981 5519 GGXHOI 369 - 3981 5519 0 2 1007,468, 0,1070, -,-, 640596 Satellite W-chromosome 585 chrUn_NT_466466v1 7819 8687 GGXHOI 335 - 7819 8687 0 2 513,338, 0,530, -,-, 640600 Satellite W-chromosome 585 chrUn_NT_466466v1 12782 14325 GGXHOI 377 - 12782 14325 0 2 1008,472, 0,1071, -,-, 640606 Satellite W-chromosome 585 chrUn_NT_466467v1 5063 5968 CR1-F 449 + 5063 5968 0 3 198,197,184, 0,241,721, +,+,+, 640618 LINE CR1 585 chrUn_NT_466467v1 6241 6928 CR1-F 572 + 6241 6928 0 2 187,213, 0,474, +,+, 640621 LINE CR1 585 chrUn_NT_466467v1 6971 15232 CR1-F 538 + 6971 15232 0 26 203,202,204,155,196,179,156,188,189,200,204,204,203,149,196,200,156,190,176,177,189,199,201,201,199,122, 0,245,489,958,1401,1848,2071,2516,2752,2983,3482,3728,3974,4440,4875,5113,5572,6015,6247,6467,6688,6919,7415,7658,7900,8139, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 640623 LINE CR1 585 chrUn_NT_466470v1 7217 15201 GGXHOI 467 - 7217 15201 0 7 1148,275,2431,1237,1516,968,284, 0,1164,1450,3899,5147,6678,7700, -,-,-,-,-,-,-, 640641 Satellite W-chromosome 585 chrUn_NT_466471v1 6602 8147 GGXHOI 367 - 6602 8147 0 2 1099,386, 0,1159, -,-, 640652 Satellite W-chromosome 585 chrUn_NT_466471v1 10707 11351 GGXHOI 372 - 10707 11351 0 2 271,311, 0,333, -,-, 640656 Satellite W-chromosome 585 chrUn_NT_466472v1 3217 14201 GGXHOI 407 + 3217 14201 0 10 2166,1867,443,456,397,544,1895,473,1398,1133, 0,2211,4095,4558,5031,5448,6009,7921,8438,9851, +,+,+,+,+,+,+,+,+,+, 640666 Satellite W-chromosome 585 chrUn_NT_466472v1 14400 15222 GGXHOI 344 + 14400 15222 0 3 197,194,317, 0,250,505, +,+,+, 640667 Satellite W-chromosome 585 chrUn_NT_466473v1 3576 4199 CR1-H 678 - 3576 4199 0 2 139,478, 0,145, -,-, 640671 LINE CR1 585 chrUn_NT_466473v1 6626 7898 CR1-H 599 - 6626 7898 0 2 117,1155, 0,117, -,-, 640675 LINE CR1 585 chrUn_NT_466474v1 9882 10189 CR1-X 515 + 9882 10189 0 3 171,75,50, 0,172,257, +,+,+, 640690 LINE CR1 585 chrUn_NT_466475v1 981 2157 GGXHOI 386 + 981 2157 0 2 91,569, 0,607, +,+, 640697 Satellite W-chromosome 585 chrUn_NT_466475v1 3916 4693 GGXHOI 440 + 3916 4693 0 2 71,693, 0,84, +,+, 640702 Satellite W-chromosome 585 chrUn_NT_466475v1 4736 6697 GGXHOI 528 + 4736 6697 0 2 728,665, 0,1296, +,+, 640704 Satellite W-chromosome 585 chrUn_NT_466475v1 6728 8821 GGXHOI 586 + 6728 8821 0 2 742,149, 0,1944, +,+, 640707 Satellite W-chromosome 585 chrUn_NT_466475v1 8842 12593 GGXHOI 533 + 8842 12593 0 4 1719,207,306,625, 0,2341,2562,3126, +,+,+,+, 640710 Satellite W-chromosome 585 chrUn_NT_466475v1 12662 15218 GGXHOI 580 + 12662 15218 0 3 25,28,120, 0,1941,2436, +,+,+, 640713 Satellite W-chromosome 585 chrUn_NT_466476v1 13495 14169 CR1-Y2_Aves 262 - 13495 14169 0 2 387,287, 0,387, -,-, 640730 LINE CR1 585 chrUn_NT_466477v1 5907 6236 GGERV10_LTR 672 - 5907 6236 0 2 160,59, 0,270, -,-, 640732 LTR ERVL 585 chrUn_NT_466477v1 8400 8724 GGERV10_LTR 679 - 8400 8724 0 2 159,62, 0,262, -,-, 640734 LTR ERVL 585 chrUn_NT_466478v1 573 1150 GGLTR5B 344 - 573 1150 0 2 145,394, 0,183, -,-, 640739 LTR ERVL 585 chrUn_NT_466478v1 7325 15135 GGLTR7-int 516 - 7325 15135 0 5 126,583,1171,504,248, 0,618,5638,7058,7562, -,-,-,-,-, 640745 LTR ERV1 585 chrUn_NT_466479v1 1007 5060 GGXHOI 430 + 1007 5060 0 5 385,1202,849,151,1334, 0,429,1647,2552,2719, +,+,+,+,+, 640749 Satellite W-chromosome 585 chrUn_NT_466479v1 5469 6658 GGXHOI 392 + 5469 6658 0 4 479,281,191,148, 0,531,830,1041, +,+,+,+, 640751 Satellite W-chromosome 585 chrUn_NT_466479v1 7730 11545 GGXHOI 419 + 7730 11545 0 7 211,963,680,145,145,1020,473, 0,222,1234,1938,2107,2307,3342, +,+,+,+,+,+,+, 640753 Satellite W-chromosome 585 chrUn_NT_466479v1 11688 13586 GGXHOI 425 + 11688 13586 0 4 363,745,201,519, 0,380,1161,1379, +,+,+,+, 640754 Satellite W-chromosome 585 chrUn_NT_466479v1 13673 15179 GGXHOI 398 + 13673 15179 0 3 163,480,829, 0,180,677, +,+,+, 640755 Satellite W-chromosome 585 chrUn_NT_466482v1 4296 8097 GGXHOI 599 - 4296 8097 0 6 406,299,148,299,148,457, 0,1080,1390,2212,2522,3344, -,-,-,-,-,-, 640799 Satellite W-chromosome 585 chrUn_NT_466482v1 12214 15183 GGXHOI 572 - 12214 15183 0 4 406,568,451,12, 0,959,2192,2957, -,-,-,-, 640810 Satellite W-chromosome 585 chrUn_NT_466484v1 1148 1572 GGXHOI 224 + 1148 1572 0 2 157,248, 0,176, +,+, 640820 Satellite W-chromosome 585 chrUn_NT_466484v1 2111 3490 GGXHOI 379 + 2111 3490 0 2 430,886, 0,493, +,+, 640822 Satellite W-chromosome 585 chrUn_NT_466484v1 3877 5420 GGXHOI 380 + 3877 5420 0 3 687,597,144, 0,745,1399, +,+,+, 640823 Satellite W-chromosome 585 chrUn_NT_466484v1 5729 7617 GGXHOI 351 + 5729 7617 0 3 1440,145,269, 0,1457,1619, +,+,+, 640824 Satellite W-chromosome 585 chrUn_NT_466484v1 7799 9418 GGXHOI 394 + 7799 9418 0 2 1331,268, 0,1351, +,+, 640825 Satellite W-chromosome 585 chrUn_NT_466484v1 9643 11253 GGXHOI 388 + 9643 11253 0 2 595,998, 0,612, +,+, 640826 Satellite W-chromosome 585 chrUn_NT_466484v1 11482 12850 GGXHOI 399 + 11482 12850 0 2 1204,147, 0,1221, +,+, 640827 Satellite W-chromosome 585 chrUn_NT_466484v1 13683 14314 GGXHOI 411 + 13683 14314 0 2 307,263, 0,368, +,+, 640829 Satellite W-chromosome 585 chrUn_NT_466485v1 517 1551 GGXHOI 340 - 517 1551 0 2 558,414, 0,620, -,-, 640832 Satellite W-chromosome 585 chrUn_NT_466485v1 3778 5725 GGXHOI 345 - 3778 5725 0 3 992,268,629, 0,1032,1318, -,-,-, 640837 Satellite W-chromosome 585 chrUn_NT_466487v1 10145 12590 GGLTR7-int 587 + 10145 12590 0 2 328,791, 0,1654, +,+, 640884 LTR ERV1 585 chrUn_NT_466487v1 12776 15000 GGLTR10D-int 901 - 12776 15000 0 2 369,1847, 0,377, -,-, 640888 LTR ERVK 585 chrUn_NT_466488v1 683 1153 (CCCTAA)n 581 + 683 1153 0 3 91,107,65, 0,119,405, +,+,+, 640893 Simple_repeat Simple_repeat 585 chrUn_NT_466488v1 1426 4109 (CCCTAA)n 612 + 1426 4109 0 9 181,115,158,191,499,192,304,181,381, 0,223,617,822,1023,1549,1781,2096,2302, +,+,+,+,+,+,+,+,+, 640896 Simple_repeat Simple_repeat 585 chrUn_NT_466488v1 4140 6434 GGXHOI 370 - 4140 6434 0 6 456,546,257,272,296,304, 0,484,1044,1348,1641,1990, -,-,-,-,-,-, 640898 Satellite W-chromosome 585 chrUn_NT_466488v1 6518 7083 GGXHOI 284 - 6518 7083 0 2 150,398, 0,167, -,-, 640899 Satellite W-chromosome 585 chrUn_NT_466488v1 7228 9793 GGXHOI 338 - 7228 9793 0 9 303,194,363,340,111,270,97,159,491, 0,350,597,1022,1386,1509,1792,1900,2074, -,-,-,-,-,-,-,-,-, 640900 Satellite W-chromosome 585 chrUn_NT_466488v1 9905 10310 GGXHOI 315 - 9905 10310 0 2 94,293, 0,112, -,-, 640901 Satellite W-chromosome 585 chrUn_NT_466488v1 10381 14305 GGXHOI 326 - 10381 14305 0 8 134,157,130,302,707,88,1047,1118, 0,178,351,498,846,1572,1696,2806, -,-,-,-,-,-,-,-, 640902 Satellite W-chromosome 585 chrUn_NT_466488v1 14683 15162 GGXHOI 309 - 14683 15162 0 2 127,339, 0,140, -,-, 640904 Satellite W-chromosome 585 chrUn_NT_466490v1 1557 2253 CR1-B2 705 - 1557 2253 0 2 465,228, 0,468, -,-, 640908 LINE CR1 585 chrUn_NT_466490v1 8278 8844 CR1-X 417 + 8278 8844 0 3 171,132,263, 0,171,303, +,+,+, 640912 LINE CR1 585 chrUn_NT_466491v1 342 960 CR1-H 373 - 342 960 0 2 379,205, 0,413, -,-, 640920 LINE CR1 585 chrUn_NT_466491v1 5053 6306 Char12Mar1_GG 592 - 5053 6306 0 2 121,581, 0,672, -,-, 640926 DNA hAT-Charlie 585 chrUn_NT_466491v1 8761 9385 CR1-H 378 - 8761 9385 0 2 379,209, 0,415, -,-, 640929 LINE CR1 585 chrUn_NT_466491v1 11266 11890 CR1-H 378 - 11266 11890 0 2 379,209, 0,415, -,-, 640932 LINE CR1 585 chrUn_NT_466491v1 13771 14393 CR1-H 378 - 13771 14393 0 2 377,209, 0,413, -,-, 640935 LINE CR1 585 chrUn_NT_466492v1 2368 8167 GGERV10_LTR 966 - 2368 8167 0 3 213,5366,219, 0,213,5580, -,-,-, 640940 LTR ERVL 585 chrUn_NT_466492v1 8176 11433 GGXHOI 375 - 8176 11433 0 5 977,269,557,268,1046, 0,1019,1306,1881,2211, -,-,-,-,-, 640941 Satellite W-chromosome 585 chrUn_NT_466492v1 11695 14605 GGXHOI 354 - 11695 14605 0 3 270,2312,268, 0,288,2642, -,-,-, 640942 Satellite W-chromosome 585 chrUn_NT_466493v1 2334 2630 (ACCCCATAGGG)n 323 - 2334 2630 0 2 141,138, 0,158, -,-, 640950 Satellite Satellite 585 chrUn_NT_466493v1 4236 4532 (ACCCCATAGGG)n 323 - 4236 4532 0 2 141,138, 0,158, -,-, 640957 Satellite Satellite 585 chrUn_NT_466493v1 7372 8293 (CTCTATGGGG)n 601 - 7372 8293 0 5 117,257,158,119,119, 0,160,460,631,802, -,-,-,-,-, 640965 Satellite Satellite 585 chrUn_NT_466494v1 1341 1842 (ACCCATAGAG)n 560 - 1341 1842 0 2 79,220, 0,281, -,-, 640979 Satellite Satellite 585 chrUn_NT_466497v1 1317 1460 GA-rich 276 + 1317 1460 0 2 42,44, 0,99, +,+, 641019 Low_complexity Low_complexity 585 chrUn_NT_466497v1 7304 7432 GA-rich 380 + 7304 7432 0 2 43,37, 0,91, +,+, 641030 Low_complexity Low_complexity 585 chrUn_NT_466497v1 10248 10391 GA-rich 244 + 10248 10391 0 2 43,63, 0,80, +,+, 641036 Low_complexity Low_complexity 585 chrUn_NT_466498v1 3461 11826 GGXHOI 388 - 3461 11826 0 6 198,1217,1626,301,299,4567, 0,225,1480,3131,3466,3798, -,-,-,-,-,-, 641049 Satellite W-chromosome 585 chrUn_NT_466498v1 12026 15146 GGXHOI 376 - 12026 15146 0 3 612,1842,589, 0,638,2531, -,-,-, 641050 Satellite W-chromosome 585 chrUn_NT_466499v1 9537 10161 GGLTR11 168 - 9537 10161 0 2 131,196, 0,428, -,-, 641052 LTR ERV1 585 chrUn_NT_466501v1 3607 5527 GGLTR7-int 674 + 3607 5527 0 4 530,652,74,34, 0,530,1812,1886, +,+,+,+, 641061 LTR ERV1 585 chrUn_NT_466501v1 10322 11160 Z-REP 517 - 10322 11160 0 2 314,439, 0,399, -,-, 641065 Satellite macro 585 chrUn_NT_466502v1 574 1409 G-rich 377 + 574 1409 0 2 39,748, 0,87, +,+, 641072 Low_complexity Low_complexity 585 chrUn_NT_466503v1 3269 3423 G-rich 280 + 3269 3423 0 2 37,86, 0,68, +,+, 641090 Low_complexity Low_complexity 585 chrUn_NT_466504v1 5713 6031 (CCCCATTGGG)n 359 + 5713 6031 0 2 156,114, 0,204, +,+, 641115 Satellite Satellite 585 chrUn_NT_466506v1 922 1808 (CCTTG)n 393 + 922 1808 0 3 210,191,379, 0,266,507, +,+,+, 641130 Simple_repeat Simple_repeat 585 chrUn_NT_466506v1 3161 4116 (CAAGG)n 446 + 3161 4116 0 3 381,359,183, 0,381,772, +,+,+, 641137 Simple_repeat Simple_repeat 585 chrUn_NT_466506v1 4323 5048 (CCTTG)n 450 + 4323 5048 0 3 197,258,192, 0,213,533, +,+,+, 641139 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 685 1076 (CCTTG)n 468 + 685 1076 0 2 188,178, 0,213, +,+, 641159 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 1899 2312 (CAAGG)n 535 + 1899 2312 0 3 46,31,179, 0,190,234, +,+,+, 641163 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 2368 2769 (CCTTG)n 561 + 2368 2769 0 2 206,195, 0,206, +,+, 641165 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 3707 4118 (CAAGG)n 522 + 3707 4118 0 2 183,228, 0,183, +,+, 641170 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 5416 6020 (CCTTG)n 547 + 5416 6020 0 2 225,353, 0,251, +,+, 641176 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 6651 6919 (CAAGG)n 653 + 6651 6919 0 2 46,222, 0,46, +,+, 641182 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 7109 7648 (CCTTG)n 446 + 7109 7648 0 2 160,366, 0,173, +,+, 641185 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 8389 8767 (CAAGG)n 450 + 8389 8767 0 2 176,191, 0,187, +,+, 641190 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 11898 12217 (GCCTG)n 400 + 11898 12217 0 2 98,43, 0,276, +,+, 641202 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 12593 13125 (CAAGG)n 601 + 12593 13125 0 3 46,226,239, 0,46,293, +,+,+, 641206 Simple_repeat Simple_repeat 585 chrUn_NT_466507v1 14257 14795 (CCTTG)n 484 + 14257 14795 0 2 327,190, 0,348, +,+, 641209 Simple_repeat Simple_repeat 585 chrUn_NT_466508v1 4385 10443 GGXHOI 591 - 4385 10443 0 8 199,299,148,436,455,460,299,148, 0,1076,1386,2229,3336,4465,5600,5910, -,-,-,-,-,-,-,-, 641218 Satellite W-chromosome 585 chrUn_NT_466508v1 12297 14837 GGXHOI 588 - 12297 14837 0 5 407,414,147,265,20, 0,965,1390,2205,2520, -,-,-,-,-, 641227 Satellite W-chromosome 585 chrUn_NT_466511v1 8538 9525 (GCCTG)n 506 + 8538 9525 0 4 263,26,212,117, 0,441,492,870, +,+,+,+, 641257 Simple_repeat Simple_repeat 585 chrUn_NT_466511v1 12912 15121 GGERVL-B-int 737 + 12912 15121 0 3 314,1223,672, 0,314,1537, +,+,+, 641271 LTR ERVL 585 chrUn_NT_466513v1 2361 4261 GGXHOI 390 + 2361 4261 0 2 874,1008, 0,892, +,+, 641284 Satellite W-chromosome 585 chrUn_NT_466513v1 5017 7216 GGXHOI 388 + 5017 7216 0 3 472,1085,516, 0,535,1683, +,+,+, 641286 Satellite W-chromosome 585 chrUn_NT_466513v1 8463 9516 GGXHOI 390 + 8463 9516 0 2 472,518, 0,535, +,+, 641289 Satellite W-chromosome 585 chrUn_NT_466513v1 11911 12822 GGXHOI 392 + 11911 12822 0 2 388,468, 0,443, +,+, 641294 Satellite W-chromosome 585 chrUn_NT_466515v1 382 779 (CGAGG)n 566 + 382 779 0 2 173,180, 0,217, +,+, 641305 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 2510 3122 (CGAGG)n 510 + 2510 3122 0 2 298,296, 0,316, +,+, 641313 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 4500 5334 (CGAGG)n 514 + 4500 5334 0 4 217,181,177,178, 0,230,432,656, +,+,+,+, 641321 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 5556 6281 (CGAGG)n 560 + 5556 6281 0 2 524,177, 0,548, +,+, 641324 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 6406 7842 (CGAGG)n 517 + 6406 7842 0 4 530,295,180,150, 0,758,1079,1286, +,+,+,+, 641326 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 8593 9154 (CGAGG)n 516 + 8593 9154 0 2 175,350, 0,211, +,+, 641333 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 9241 11359 (CGAGG)n 499 + 9241 11359 0 4 175,874,183,798, 0,231,1116,1320, +,+,+,+, 641335 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 12777 13191 (CGAGG)n 535 + 12777 13191 0 2 180,190, 0,224, +,+, 641344 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 13249 13778 (CGAGG)n 493 + 13249 13778 0 2 176,334, 0,195, +,+, 641346 Simple_repeat Simple_repeat 585 chrUn_NT_466515v1 14145 15107 (CGAGG)n 534 + 14145 15107 0 4 179,343,186,172, 0,210,564,790, +,+,+,+, 641350 Simple_repeat Simple_repeat 585 chrUn_NT_466516v1 10666 11782 CR1-B2 690 - 10666 11782 0 2 888,225, 0,891, -,-, 641362 LINE CR1 585 chrUn_NT_466517v1 14497 14544 A-rich 434 + 14497 14544 0 2 11,13, 0,34, +,+, 641373 Low_complexity Low_complexity 585 chrUn_NT_466518v1 107 9481 GGXHOI 417 + 107 9481 0 10 944,1143,1143,1142,1143,1143,1143,716,308,299, 0,964,2127,3290,4452,5615,6778,7941,8709,9075, +,+,+,+,+,+,+,+,+,+, 641376 Satellite W-chromosome 585 chrUn_NT_466518v1 9549 12298 GGXHOI 448 + 9549 12298 0 4 1344,148,1062,146, 0,1358,1526,2603, +,+,+,+, 641377 Satellite W-chromosome 585 chrUn_NT_466518v1 12615 14335 GGXHOI 390 + 12615 14335 0 4 497,357,149,644, 0,532,906,1076, +,+,+,+, 641378 Satellite W-chromosome 585 chrUn_NT_466520v1 6081 6191 (TTTGC)n 308 + 6081 6191 0 2 61,9, 0,101, +,+, 641387 Simple_repeat Simple_repeat 585 chrUn_NT_466521v1 1182 1543 (CCTTG)n 524 + 1182 1543 0 2 130,51, 0,310, +,+, 641403 Simple_repeat Simple_repeat 585 chrUn_NT_466521v1 1890 2510 (CAAGG)n 476 + 1890 2510 0 2 178,390, 0,230, +,+, 641406 Simple_repeat Simple_repeat 585 chrUn_NT_466521v1 3700 4311 (CAAGG)n 406 + 3700 4311 0 2 367,193, 0,418, +,+, 641412 Simple_repeat Simple_repeat 585 chrUn_NT_466521v1 5032 5458 (CCTTG)n 449 + 5032 5458 0 2 185,224, 0,202, +,+, 641417 Simple_repeat Simple_repeat 585 chrUn_NT_466521v1 5878 6372 GGXHOI 351 + 5878 6372 0 2 259,172, 0,322, +,+, 641420 Satellite W-chromosome 585 chrUn_NT_466521v1 6553 7494 GGXHOI 333 + 6553 7494 0 2 497,388, 0,553, +,+, 641421 Satellite W-chromosome 585 chrUn_NT_466521v1 11714 12167 GGXHOI 330 + 11714 12167 0 2 180,221, 0,232, +,+, 641425 Satellite W-chromosome 585 chrUn_NT_466521v1 13553 14340 (CCTTG)n 487 + 13553 14340 0 3 375,175,180, 0,403,607, +,+,+, 641430 Simple_repeat Simple_repeat 585 chrUn_NT_466522v1 2396 2794 Sat-CR1_GG 200 - 2396 2794 0 2 110,80, 0,318, -,-, 641435 Satellite Satellite 585 chrUn_NT_466522v1 9627 10030 Sat-CR1_GG 48 - 9627 10030 0 2 147,50, 0,353, -,-, 641443 Satellite Satellite 585 chrUn_NT_466523v1 2323 3523 GGXHOI 355 - 2323 3523 0 3 182,201,735, 0,243,465, -,-,-, 641448 Satellite W-chromosome 585 chrUn_NT_466523v1 4386 6791 GGXHOI 361 - 4386 6791 0 2 1900,472, 0,1933, -,-, 641450 Satellite W-chromosome 585 chrUn_NT_466523v1 7140 9271 GGXHOI 390 - 7140 9271 0 2 901,1209, 0,922, -,-, 641452 Satellite W-chromosome 585 chrUn_NT_466523v1 9646 10237 GGXHOI 379 - 9646 10237 0 2 273,276, 0,315, -,-, 641454 Satellite W-chromosome 585 chrUn_NT_466523v1 12022 12407 GGXHOI 339 - 12022 12407 0 2 135,230, 0,155, -,-, 641457 Satellite W-chromosome 585 chrUn_NT_466523v1 14471 15084 (CCTTG)n 606 + 14471 15084 0 2 400,213, 0,400, +,+, 641464 Simple_repeat Simple_repeat 585 chrUn_NT_466524v1 4972 6377 (CCTTG)n 550 + 4972 6377 0 5 176,26,77,180,105, 0,361,565,821,1300, +,+,+,+,+, 641468 Simple_repeat Simple_repeat 585 chrUn_NT_466524v1 13087 13198 (AGCAA)n 318 + 13087 13198 0 2 8,55, 0,56, +,+, 641484 Simple_repeat Simple_repeat 585 chrUn_NT_466525v1 500 3131 GGXHOI 461 - 500 3131 0 2 1243,1360, 0,1271, -,-, 641489 Satellite W-chromosome 585 chrUn_NT_466525v1 9686 15087 (GTTAGG)n 821 + 9686 15087 0 2 33,5353, 0,48, +,+, 641498 Simple_repeat Simple_repeat 585 chrUn_NT_466527v1 11314 12709 GGLTR7-int 309 - 11314 12709 0 3 280,313,101, 0,979,1294, -,-,-, 641515 LTR ERV1 585 chrUn_NT_466527v1 13105 13356 (CTCTATGGGG)n 418 + 13105 13356 0 2 60,72, 0,179, +,+, 641516 Satellite Satellite 585 chrUn_NT_466527v1 13437 15015 GGERVL-B-int 796 - 13437 15015 0 2 902,676, 0,902, -,-, 641518 LTR ERVL 585 chrUn_NT_466528v1 865 2014 GGXHOI 414 - 865 2014 0 2 569,539, 0,610, -,-, 641520 Satellite W-chromosome 585 chrUn_NT_466528v1 4634 5835 GGXHOI 388 - 4634 5835 0 2 761,422, 0,779, -,-, 641523 Satellite W-chromosome 585 chrUn_NT_466528v1 7503 8666 GGXHOI 411 - 7503 8666 0 2 563,559, 0,604, -,-, 641525 Satellite W-chromosome 585 chrUn_NT_466528v1 12826 14666 GGXHOI 415 - 12826 14666 0 2 1393,429, 0,1411, -,-, 641531 Satellite W-chromosome 585 chrUn_NT_466529v1 4398 4614 G-rich 358 + 4398 4614 0 2 68,102, 0,114, +,+, 641536 Low_complexity Low_complexity 585 chrUn_NT_466529v1 10099 11506 GGLTR7-int 247 - 10099 11506 0 3 281,316,99, 0,990,1308, -,-,-, 641542 LTR ERV1 585 chrUn_NT_466529v1 12249 14926 GGERVL-B-int 710 - 12249 14926 0 2 2375,302, 0,2375, -,-, 641544 LTR ERVL 585 chrUn_NT_466532v1 7534 7627 CR1-E 653 - 7534 7627 0 2 49,44, 0,49, -,-, 641580 LINE CR1 585 chrUn_NT_466532v1 10139 13271 GGLTR7-int 410 + 10139 13271 0 4 116,1648,948,278, 0,116,1859,2854, +,+,+,+, 641583 LTR ERV1 585 chrUn_NT_466533v1 8723 9259 GGXHOI 332 - 8723 9259 0 2 209,265, 0,271, -,-, 641598 Satellite W-chromosome 585 chrUn_NT_466533v1 9340 10034 GGXHOI 331 - 9340 10034 0 2 234,442, 0,252, -,-, 641599 Satellite W-chromosome 585 chrUn_NT_466533v1 10621 11461 GGXHOI 364 - 10621 11461 0 2 517,305, 0,535, -,-, 641601 Satellite W-chromosome 585 chrUn_NT_466533v1 13872 15052 GGXHOI 435 - 13872 15052 0 3 797,55,276, 0,808,904, -,-,-, 641604 Satellite W-chromosome 585 chrUn_NT_466535v1 6011 7561 GGXHOI 411 - 6011 7561 0 2 835,695, 0,855, -,-, 641611 Satellite W-chromosome 585 chrUn_NT_466535v1 7640 8288 GGXHOI 355 - 7640 8288 0 3 308,150,153, 0,334,495, -,-,-, 641612 Satellite W-chromosome 585 chrUn_NT_466535v1 9647 10459 GGXHOI 350 - 9647 10459 0 2 391,401, 0,411, -,-, 641614 Satellite W-chromosome 585 chrUn_NT_466535v1 10622 15053 GGXHOI 402 - 10622 15053 0 7 445,145,1133,429,521,1026,545, 0,458,619,1803,2263,2840,3886, -,-,-,-,-,-,-, 641615 Satellite W-chromosome 585 chrUn_NT_466536v1 1415 3303 GGXHOI 367 + 1415 3303 0 2 1319,553, 0,1335, +,+, 641618 Satellite W-chromosome 585 chrUn_NT_466536v1 5204 6255 GGXHOI 392 + 5204 6255 0 2 472,516, 0,535, +,+, 641622 Satellite W-chromosome 585 chrUn_NT_466536v1 7983 9484 GGXHOI 386 + 7983 9484 0 2 924,515, 0,986, +,+, 641625 Satellite W-chromosome 585 chrUn_NT_466536v1 9584 11127 GGXHOI 386 + 9584 11127 0 2 472,1008, 0,535, +,+, 641626 Satellite W-chromosome 585 chrUn_NT_466536v1 11882 12928 GGXHOI 391 + 11882 12928 0 2 472,511, 0,535, +,+, 641628 Satellite W-chromosome 585 chrUn_NT_466537v1 730 1080 (CAAGG)n 476 + 730 1080 0 2 147,181, 0,169, +,+, 641635 Simple_repeat Simple_repeat 585 chrUn_NT_466537v1 1161 1925 (CAAGG)n 495 + 1161 1925 0 3 253,284,12, 0,281,752, +,+,+, 641637 Simple_repeat Simple_repeat 585 chrUn_NT_466537v1 5021 6005 GGXHOI 359 - 5021 6005 0 2 545,381, 0,603, -,-, 641644 Satellite W-chromosome 585 chrUn_NT_466537v1 9714 10698 GGXHOI 311 - 9714 10698 0 3 313,223,396, 0,342,588, -,-,-, 641649 Satellite W-chromosome 585 chrUn_NT_466537v1 10805 12765 GGXHOI 322 - 10805 12765 0 4 616,407,560,304, 0,654,1079,1656, -,-,-,-, 641650 Satellite W-chromosome 585 chrUn_NT_466538v1 199 1086 (CAAGG)n 475 + 199 1086 0 2 469,401, 0,486, +,+, 641655 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 1110 1729 (CCTTG)n 516 + 1110 1729 0 3 226,114,74, 0,250,545, +,+,+, 641656 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 2338 2764 (CAAGG)n 647 + 2338 2764 0 2 46,380, 0,46, +,+, 641662 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 2804 3200 (CCTTG)n 563 + 2804 3200 0 2 198,198, 0,198, +,+, 641663 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 4975 5618 (CAAGG)n 510 + 4975 5618 0 2 179,450, 0,193, +,+, 641669 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 5795 6398 (CCTTG)n 546 + 5795 6398 0 2 225,352, 0,251, +,+, 641671 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 7026 7295 (CAAGG)n 654 + 7026 7295 0 2 46,223, 0,46, +,+, 641677 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 7494 7894 (CCTTG)n 559 + 7494 7894 0 2 205,195, 0,205, +,+, 641680 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 8096 8432 (GCCTG)n 374 + 8096 8432 0 2 123,36, 0,300, +,+, 641683 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 10623 11021 (CCTTG)n 467 + 10623 11021 0 2 189,175, 0,223, +,+, 641694 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 11794 12260 (CAAGG)n 604 + 11794 12260 0 3 45,226,173, 0,45,293, +,+,+, 641696 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 12259 12659 (CCTTG)n 559 + 12259 12659 0 2 205,195, 0,205, +,+, 641697 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 12886 13205 (GCCTG)n 400 + 12886 13205 0 2 98,43, 0,276, +,+, 641700 Simple_repeat Simple_repeat 585 chrUn_NT_466538v1 13255 13582 (CAGGC)n 314 + 13255 13582 0 2 219,84, 0,243, +,+, 641702 Simple_repeat Simple_repeat 585 chrUn_NT_466539v1 2 2552 GGXHOI 492 + 2 2552 0 3 963,522,212, 0,1281,2338, +,+,+, 641711 Satellite W-chromosome 585 chrUn_NT_466539v1 2614 5867 GGXHOI 539 + 2614 5867 0 2 1350,1858, 0,1395, +,+, 641714 Satellite W-chromosome 585 chrUn_NT_466539v1 4011 7127 Sat-CR1_GG 158 + 4011 7127 0 2 1899,552, 0,2564, +,+, 641715 Satellite Satellite 585 chrUn_NT_466539v1 5910 6575 GGXHOI 578 + 5910 6575 0 2 68,281, 0,384, +,+, 641716 Satellite W-chromosome 585 chrUn_NT_466539v1 6618 12372 GGXHOI 564 + 6618 12372 0 6 68,329,370,104,399,809, 0,387,1802,4182,4534,4945, +,+,+,+,+,+, 641717 Satellite W-chromosome 585 chrUn_NT_466539v1 11601 14222 Sat-CR1_GG 174 + 11601 14222 0 2 816,430, 0,2191, +,+, 641721 Satellite Satellite 585 chrUn_NT_466539v1 12417 13792 GGXHOI 580 + 12417 13792 0 2 652,404, 0,971, +,+, 641722 Satellite W-chromosome 585 chrUn_NT_466539v1 14503 15046 GGXHOI 475 + 14503 15046 0 2 295,201, 0,342, +,+, 641724 Satellite W-chromosome 585 chrUn_NT_466540v1 13836 15048 GGXHOI 365 + 13836 15048 0 4 254,414,224,244, 0,278,711,968, +,+,+,+, 641735 Satellite W-chromosome 585 chrUn_NT_466541v1 5632 15043 GGXHOI 417 - 5632 15043 0 7 1157,3802,1726,695,559,1113,230, 0,1174,4996,6738,7448,8028,9181, -,-,-,-,-,-,-, 641738 Satellite W-chromosome 585 chrUn_NT_466542v1 6208 6690 GGXHOI 259 + 6208 6690 0 2 209,242, 0,240, +,+, 641742 Satellite W-chromosome 585 chrUn_NT_466542v1 7879 8983 GGXHOI 323 + 7879 8983 0 2 211,850, 0,254, +,+, 641744 Satellite W-chromosome 585 chrUn_NT_466542v1 10620 13381 GGXHOI 342 + 10620 13381 0 5 312,168,322,141,1684, 0,326,544,881,1077, +,+,+,+,+, 641746 Satellite W-chromosome 585 chrUn_NT_466542v1 13497 15022 GGXHOI 355 + 13497 15022 0 2 519,966, 0,559, +,+, 641747 Satellite W-chromosome 585 chrUn_NT_466544v1 10807 11430 GGXHOI 326 + 10807 11430 0 2 310,299, 0,324, +,+, 641791 Satellite W-chromosome 585 chrUn_NT_466544v1 11652 12272 GGXHOI 317 + 11652 12272 0 3 206,115,211, 0,261,409, +,+,+, 641792 Satellite W-chromosome 585 chrUn_NT_466544v1 12529 13054 GGXHOI 403 + 12529 13054 0 2 220,284, 0,241, +,+, 641794 Satellite W-chromosome 585 chrUn_NT_466544v1 13131 15038 GGXHOI 337 + 13131 15038 0 7 372,137,177,130,275,210,475, 0,390,580,773,916,1207,1432, +,+,+,+,+,+,+, 641795 Satellite W-chromosome 585 chrUn_NT_466545v1 11385 12512 CR1-B2 686 + 11385 12512 0 2 226,898, 0,229, +,+, 641806 LINE CR1 585 chrUn_NT_466546v1 1554 1938 CR1-C4 541 + 1554 1938 0 2 53,241, 0,143, +,+, 641809 LINE CR1 585 chrUn_NT_466546v1 6818 7683 CR1-C 875 + 6818 7683 0 2 447,418, 0,447, +,+, 641815 LINE CR1 585 chrUn_NT_466546v1 8823 12254 CR1-C4 493 + 8823 12254 0 2 844,241, 0,3190, +,+, 641818 LINE CR1 585 chrUn_NT_466549v1 7931 8179 CR1-X 492 + 7931 8179 0 2 171,77, 0,171, +,+, 641842 LINE CR1 585 chrUn_NT_466549v1 13597 14690 CR1-B2 667 + 13597 14690 0 2 227,863, 0,230, +,+, 641845 LINE CR1 585 chrUn_NT_466550v1 1191 3102 GGLTR7-int 477 + 1191 3102 0 2 1216,57, 0,1854, +,+, 641848 LTR ERV1 585 chrUn_NT_466550v1 7113 7733 Z-REP 482 - 7113 7733 0 2 315,267, 0,353, -,-, 641852 Satellite macro 585 chrUn_NT_466550v1 7721 10834 CR1-Y2 676 - 7721 10834 0 3 121,117,13, 0,2983,3100, -,-,-, 641853 LINE CR1 585 chrUn_NT_466551v1 7808 11055 GGXHOI 365 - 7808 11055 0 2 963,2261, 0,986, -,-, 641861 Satellite W-chromosome 585 chrUn_NT_466551v1 11293 15015 GGXHOI 434 - 11293 15015 0 2 566,3140, 0,582, -,-, 641862 Satellite W-chromosome 585 chrUn_NT_466552v1 11411 14043 Sat-CR1_GG 208 - 11411 14043 0 2 375,103, 0,2529, -,-, 641887 Satellite Satellite 585 chrUn_NT_466553v1 341 644 (CCTTG)n 472 + 341 644 0 2 177,104, 0,199, +,+, 641894 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 1009 1346 (CCTTG)n 494 + 1009 1346 0 2 111,55, 0,282, +,+, 641898 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 2510 3461 (CAAGG)n 513 + 2510 3461 0 3 140,104,513, 0,321,438, +,+,+, 641907 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 3572 3884 (GCCTG)n 368 + 3572 3884 0 2 89,41, 0,271, +,+, 641910 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 4303 5189 (CAAGG)n 438 + 4303 5189 0 3 270,329,258, 0,282,628, +,+,+, 641915 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 5628 6096 (CCTTG)n 522 + 5628 6096 0 2 134,53, 0,415, +,+, 641918 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 6483 6884 (CCTTG)n 478 + 6483 6884 0 2 192,183, 0,218, +,+, 641922 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 7255 8173 (CAAGG)n 509 + 7255 8173 0 4 136,205,154,55, 0,319,524,863, +,+,+,+, 641924 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 9458 9878 (CAAGG)n 450 + 9458 9878 0 2 186,182, 0,238, +,+, 641935 Simple_repeat Simple_repeat 585 chrUn_NT_466553v1 9930 10831 (CCTTG)n 474 + 9930 10831 0 3 304,18,55, 0,482,846, +,+,+, 641936 Simple_repeat Simple_repeat 585 chrUn_NT_466554v1 2225 4727 GGXHOI 528 - 2225 4727 0 3 972,515,986, 0,988,1516, -,-,-, 641948 Satellite W-chromosome 585 chrUn_NT_466554v1 4793 7735 GGXHOI 581 - 4793 7735 0 3 728,670,1260, 0,1000,1682, -,-,-, 641949 Satellite W-chromosome 585 chrUn_NT_466554v1 7801 9104 GGXHOI 548 - 7801 9104 0 2 744,357, 0,946, -,-, 641951 Satellite W-chromosome 585 chrUn_NT_466554v1 10508 14616 GGXHOI 552 - 10508 14616 0 2 3521,316, 0,3792, -,-, 641954 Satellite W-chromosome 585 chrUn_NT_466555v1 13792 14812 CR1-H 578 + 13792 14812 0 3 141,766,110, 0,144,910, +,+,+, 641970 LINE CR1 585 chrUn_NT_466557v1 845 1306 (CAAGG)n 400 + 845 1306 0 2 176,259, 0,202, +,+, 641974 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 2033 2922 (CCTTG)n 518 + 2033 2922 0 4 224,188,76,189, 0,250,624,700, +,+,+,+, 641979 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 3749 4442 (CCTTG)n 541 + 3749 4442 0 3 60,53,392, 0,248,301, +,+,+, 641986 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 5078 5346 (CAAGG)n 659 + 5078 5346 0 2 46,222, 0,46, +,+, 641992 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 5273 5614 (CAGGC)n 352 + 5273 5614 0 2 90,73, 0,268, +,+, 641993 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 5870 6516 (CAAGG)n 519 + 5870 6516 0 2 336,293, 0,353, +,+, 641997 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 6569 6800 (CAAGG)n 464 + 6569 6800 0 2 24,183, 0,48, +,+, 641999 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 6917 7546 (CCTTG)n 550 + 6917 7546 0 2 259,353, 0,276, +,+, 642001 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 8372 9482 (CAAGG)n 501 + 8372 9482 0 4 373,214,120,25, 0,373,626,1085, +,+,+,+, 642009 Simple_repeat Simple_repeat 585 chrUn_NT_466557v1 9536 10506 (CCTTG)n 470 + 9536 10506 0 2 200,734, 0,236, +,+, 642012 Simple_repeat Simple_repeat 585 chrUn_NT_466558v1 11921 13408 GGLTR7B 510 + 11921 13408 0 2 897,120, 0,1367, +,+, 642042 LTR ERV1 585 chrUn_NT_466559v1 3039 3175 (TTGCT)n 290 + 3039 3175 0 2 78,9, 0,127, +,+, 642047 Simple_repeat Simple_repeat 585 chrUn_NT_466559v1 9014 9104 (TCCCACC)n 378 + 9014 9104 0 2 34,16, 0,74, +,+, 642055 Simple_repeat Simple_repeat 585 chrUn_NT_466559v1 12521 13154 CR1-H 637 - 12521 13154 0 2 139,488, 0,145, -,-, 642058 LINE CR1 585 chrUn_NT_466561v1 10981 11881 (CCTCG)n 641 + 10981 11881 0 2 638,251, 0,649, +,+, 642073 Simple_repeat Simple_repeat 585 chrUn_NT_466561v1 11874 13042 GGXHOI 423 + 11874 13042 0 2 696,438, 0,730, +,+, 642074 Satellite W-chromosome 585 chrUn_NT_466561v1 13126 14653 GGXHOI 382 + 13126 14653 0 3 331,733,407, 0,346,1120, +,+,+, 642075 Satellite W-chromosome 585 chrUn_NT_466562v1 2695 3548 GGLTR7-int 758 + 2695 3548 0 3 213,268,350, 0,235,503, +,+,+, 642079 LTR ERV1 585 chrUn_NT_466562v1 10911 11632 CR1-F 292 - 10911 11632 0 2 534,176, 0,545, -,-, 642083 LINE CR1 585 chrUn_NT_466563v1 4463 6852 GGXHOI 567 - 4463 6852 0 3 1424,413,147, 0,1818,2242, -,-,-, 642092 Satellite W-chromosome 585 chrUn_NT_466563v1 7829 8875 GGXHOI 592 - 7829 8875 0 2 887,148, 0,898, -,-, 642097 Satellite W-chromosome 585 chrUn_NT_466563v1 9601 14997 GGXHOI 591 - 9601 14997 0 11 406,299,147,337,41,164,247,148,277,147,269, 0,1080,1390,2092,2660,2712,2918,3176,4020,4308,5127, -,-,-,-,-,-,-,-,-,-,-, 642099 Satellite W-chromosome 585 chrUn_NT_466564v1 800 4972 GGXHOI 391 - 800 4972 0 3 1314,1277,1531, 0,1339,2641, -,-,-, 642106 Satellite W-chromosome 585 chrUn_NT_466564v1 5143 6924 GGXHOI 370 - 5143 6924 0 3 172,521,1007, 0,228,774, -,-,-, 642107 Satellite W-chromosome 585 chrUn_NT_466564v1 7319 14903 GGXHOI 395 - 7319 14903 0 6 1047,810,3497,436,163,1478, 0,1072,1920,5458,5918,6106, -,-,-,-,-,-, 642108 Satellite W-chromosome 585 chrUn_NT_466565v1 10269 12130 GGXHOI 438 + 10269 12130 0 2 1381,466, 0,1395, +,+, 642119 Satellite W-chromosome 585 chrUn_NT_466565v1 14828 15022 (CTCTATGGGG)n 310 - 14828 15022 0 2 18,84, 0,110, -,-, 642121 Satellite Satellite 585 chrUn_NT_466566v1 3574 5480 GGXHOI 556 - 3574 5480 0 4 385,305,222,212, 0,573,1161,1694, -,-,-,-, 642129 Satellite W-chromosome 585 chrUn_NT_466566v1 5557 6401 GGXHOI 435 - 5557 6401 0 3 130,281,189, 0,327,655, -,-,-, 642133 Satellite W-chromosome 585 chrUn_NT_466566v1 7294 8419 GGXHOI 397 - 7294 8419 0 4 202,327,180,287, 0,253,624,838, -,-,-,-, 642136 Satellite W-chromosome 585 chrUn_NT_466566v1 8637 9602 GGXHOI 437 - 8637 9602 0 3 18,232,388, 0,327,577, -,-,-, 642137 Satellite W-chromosome 585 chrUn_NT_466566v1 9676 11491 GGXHOI 524 - 9676 11491 0 3 201,720,17, 0,566,1798, -,-,-, 642139 Satellite W-chromosome 585 chrUn_NT_466566v1 11568 11963 GGXHOI 554 - 11568 11963 0 2 16,70, 0,325, -,-, 642142 Satellite W-chromosome 585 chrUn_NT_466566v1 12072 12526 GGXHOI 552 - 12072 12526 0 2 20,214, 0,240, -,-, 642144 Satellite W-chromosome 585 chrUn_NT_466566v1 12902 13652 GGXHOI 547 - 12902 13652 0 3 186,132,214, 0,197,536, -,-,-, 642147 Satellite W-chromosome 585 chrUn_NT_466566v1 13725 14772 GGXHOI 552 - 13725 14772 0 2 131,715, 0,332, -,-, 642149 Satellite W-chromosome 585 chrUn_NT_466568v1 9400 10024 CR1-H 683 - 9400 10024 0 2 139,479, 0,145, -,-, 642168 LINE CR1 585 chrUn_NT_466568v1 12491 13837 CR1-H 645 - 12491 13837 0 2 117,1229, 0,117, -,-, 642172 LINE CR1 585 chrUn_NT_466569v1 721 1209 GGXHOI 349 - 721 1209 0 2 328,135, 0,353, -,-, 642176 Satellite W-chromosome 585 chrUn_NT_466569v1 2377 3028 GGXHOI 394 - 2377 3028 0 2 232,396, 0,255, -,-, 642180 Satellite W-chromosome 585 chrUn_NT_466569v1 3055 4353 GGXHOI 410 - 3055 4353 0 3 369,203,655, 0,389,643, -,-,-, 642182 Satellite W-chromosome 585 chrUn_NT_466569v1 5694 6593 GGXHOI 385 - 5694 6593 0 2 568,281, 0,618, -,-, 642187 Satellite W-chromosome 585 chrUn_NT_466569v1 7640 8617 GGXHOI 401 - 7640 8617 0 3 296,236,382, 0,342,595, -,-,-, 642191 Satellite W-chromosome 585 chrUn_NT_466569v1 8643 9223 GGXHOI 387 - 8643 9223 0 2 230,328, 0,252, -,-, 642193 Satellite W-chromosome 585 chrUn_NT_466569v1 9521 10286 GGXHOI 369 - 9521 10286 0 3 134,144,400, 0,161,365, -,-,-, 642194 Satellite W-chromosome 585 chrUn_NT_466569v1 10366 12358 GGXHOI 374 - 10366 12358 0 3 221,1580,153, 0,241,1839, -,-,-, 642195 Satellite W-chromosome 585 chrUn_NT_466569v1 13264 14943 GGXHOI 380 - 13264 14943 0 2 220,1420, 0,259, -,-, 642199 Satellite W-chromosome 585 chrUn_NT_466570v1 7096 8223 CR1-B2 709 - 7096 8223 0 2 899,225, 0,902, -,-, 642211 LINE CR1 585 chrUn_NT_466570v1 13555 14945 CR1-X 482 + 13555 14945 0 4 111,172,76,50, 0,1079,1251,1340, +,+,+,+, 642214 LINE CR1 585 chrUn_NT_466572v1 5320 6491 Char12Mar1_GG 560 - 5320 6491 0 2 92,571, 0,600, -,-, 642243 DNA hAT-Charlie 585 chrUn_NT_466572v1 10766 11361 CR1-H 341 - 10766 11361 0 2 366,193, 0,402, -,-, 642248 LINE CR1 585 chrUn_NT_466572v1 13240 13858 CR1-H 367 - 13240 13858 0 2 375,208, 0,410, -,-, 642251 LINE CR1 585 chrUn_NT_466573v1 12253 12607 CR1-C4 499 - 12253 12607 0 2 128,226, 0,128, -,-, 642256 LINE CR1 585 chrUn_NT_466575v1 2938 3493 (CCTTG)n 460 + 2938 3493 0 3 134,176,183, 0,148,372, +,+,+, 642271 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 4550 5358 (CCTTG)n 521 + 4550 5358 0 3 284,276,206, 0,304,602, +,+,+, 642275 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 6380 6826 (CCTTG)n 526 + 6380 6826 0 2 166,98, 0,348, +,+, 642280 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 7460 8531 (CCTTG)n 525 + 7460 8531 0 4 237,204,391,174, 0,237,473,897, +,+,+,+, 642285 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 9178 9921 (CAAGG)n 480 + 9178 9921 0 2 106,456, 0,287, +,+, 642288 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 10273 10755 (CCTTG)n 444 + 10273 10755 0 2 113,189, 0,293, +,+, 642291 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 11115 12393 (CAAGG)n 514 + 11115 12393 0 4 346,202,370,25, 0,346,548,1253, +,+,+,+, 642293 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 12412 13066 (CCTTG)n 511 + 12412 13066 0 3 49,178,354, 0,71,300, +,+,+, 642296 Simple_repeat Simple_repeat 585 chrUn_NT_466575v1 13994 14780 GGXHOI 325 - 13994 14780 0 2 253,479, 0,307, -,-, 642300 Satellite W-chromosome 585 chrUn_NT_466576v1 49 1500 CR1-C 856 + 49 1500 0 2 1125,326, 0,1125, +,+, 642302 LINE CR1 585 chrUn_NT_466577v1 1069 1687 GGXHOI 414 - 1069 1687 0 2 400,202, 0,416, -,-, 642315 Satellite W-chromosome 585 chrUn_NT_466577v1 2953 6835 GGXHOI 361 - 2953 6835 0 3 3409,204,232, 0,3431,3650, -,-,-, 642318 Satellite W-chromosome 585 chrUn_NT_466577v1 9461 10678 GGXHOI 376 - 9461 10678 0 2 731,464, 0,753, -,-, 642324 Satellite W-chromosome 585 chrUn_NT_466577v1 11416 12581 GGXHOI 392 - 11416 12581 0 2 730,413, 0,752, -,-, 642327 Satellite W-chromosome 585 chrUn_NT_466577v1 12614 14936 GGXHOI 397 - 12614 14936 0 2 1441,859, 0,1463, -,-, 642329 Satellite W-chromosome 585 chrUn_NT_466578v1 7969 9725 GGERVL-A-int 746 - 7969 9725 0 2 1299,457, 0,1299, -,-, 642338 LTR ERVL 585 chrUn_NT_466579v1 1882 3135 GGXHOI 535 - 1882 3135 0 3 227,245,551, 0,430,702, -,-,-, 642343 Satellite W-chromosome 585 chrUn_NT_466579v1 7272 8275 GGXHOI 582 - 7272 8275 0 2 827,165, 0,838, -,-, 642349 Satellite W-chromosome 585 chrUn_NT_466579v1 8343 11044 GGXHOI 580 - 8343 11044 0 3 1430,962,111, 0,1441,2590, -,-,-, 642350 Satellite W-chromosome 585 chrUn_NT_466579v1 11356 12059 GGXHOI 567 - 11356 12059 0 2 491,189, 0,514, -,-, 642353 Satellite W-chromosome 585 chrUn_NT_466581v1 1768 9271 Z-REP 363 + 1768 9271 0 2 1979,5493, 0,2010, +,+, 642370 Satellite macro 585 chrUn_NT_466582v1 11372 12197 CR1-E 523 - 11372 12197 0 2 137,223, 0,602, -,-, 642390 LINE CR1 585 chrUn_NT_466583v1 12076 14926 GGXHOI 388 - 12076 14926 0 4 1747,305,411,340, 0,1763,2086,2510, -,-,-,-, 642401 Satellite W-chromosome 585 chrUn_NT_466584v1 3540 7725 GGERV28_I-int 171 + 3540 7725 0 4 130,620,384,1994, 0,597,1499,2191, +,+,+,+, 642406 LTR ERVK 585 chrUn_NT_466584v1 7960 8813 GGLTR7-int 758 + 7960 8813 0 3 213,268,350, 0,235,503, +,+,+, 642407 LTR ERV1 585 chrUn_NT_466586v1 252 8709 GGXHOI 360 - 252 8709 0 12 1419,231,182,107,1240,635,553,2222,651,223,612,130, 0,1430,1718,1924,2053,3314,3967,4539,6779,7452,7694,8327, -,-,-,-,-,-,-,-,-,-,-,-, 642423 Satellite W-chromosome 585 chrUn_NT_466586v1 9512 14832 GGXHOI 346 - 9512 14832 0 7 259,2241,1312,137,467,428,331, 0,279,2536,3885,4067,4545,4989, -,-,-,-,-,-,-, 642425 Satellite W-chromosome 585 chrUn_NT_466587v1 5084 7769 GGLTR7-int 496 + 5084 7769 0 3 117,1640,833, 0,117,1852, +,+,+, 642433 LTR ERV1 585 chrUn_NT_466588v1 7208 14672 GGXHOI 380 - 7208 14672 0 6 459,2072,1580,1323,1470,472, 0,479,2571,4168,5507,6992, -,-,-,-,-,-, 642440 Satellite W-chromosome 585 chrUn_NT_466589v1 473 3161 GGXHOI 423 + 473 3161 0 2 1328,1343, 0,1345, +,+, 642443 Satellite W-chromosome 585 chrUn_NT_466589v1 3253 7477 GGXHOI 368 + 3253 7477 0 2 1132,3076, 0,1148, +,+, 642444 Satellite W-chromosome 585 chrUn_NT_466590v1 322 1358 GGXHOI 542 - 322 1358 0 3 198,47,226, 0,483,810, -,-,-, 642454 Satellite W-chromosome 585 chrUn_NT_466590v1 1762 2558 GGXHOI 554 - 1762 2558 0 2 229,172, 0,624, -,-, 642458 Satellite W-chromosome 585 chrUn_NT_466590v1 2627 4871 GGXHOI 556 - 2627 4871 0 4 524,273,60,150, 0,921,1639,2094, -,-,-,-, 642460 Satellite W-chromosome 585 chrUn_NT_466590v1 4960 6046 GGXHOI 566 - 4960 6046 0 3 12,224,151, 0,315,935, -,-,-, 642464 Satellite W-chromosome 585 chrUn_NT_466590v1 6135 7219 GGXHOI 568 - 6135 7219 0 3 33,226,150, 0,314,934, -,-,-, 642467 Satellite W-chromosome 585 chrUn_NT_466590v1 7307 8392 GGXHOI 572 - 7307 8392 0 3 33,224,121, 0,313,964, -,-,-, 642470 Satellite W-chromosome 585 chrUn_NT_466590v1 8481 10740 GGXHOI 554 - 8481 10740 0 5 503,21,273,194,565, 0,519,935,1489,1694, -,-,-,-,-, 642473 Satellite W-chromosome 585 chrUn_NT_466590v1 10829 11913 GGXHOI 572 - 10829 11913 0 4 34,190,21,149, 0,314,520,935, -,-,-,-, 642476 Satellite W-chromosome 585 chrUn_NT_466590v1 12001 13056 GGXHOI 520 - 12001 13056 0 3 42,346,173, 0,313,882, -,-,-, 642479 Satellite W-chromosome 585 chrUn_NT_466591v1 3081 9518 Charlie12_GGa 408 - 3081 9518 0 2 92,98, 0,6339, -,-, 642489 DNA hAT-Charlie 585 chrUn_NT_466592v1 993 2539 GGXHOI 385 + 993 2539 0 2 472,1011, 0,535, +,+, 642505 Satellite W-chromosome 585 chrUn_NT_466592v1 8787 9807 GGXHOI 275 + 8787 9807 0 3 273,407,304, 0,292,716, +,+,+, 642514 Satellite W-chromosome 585 chrUn_NT_466592v1 11077 11883 GGXHOI 323 + 11077 11883 0 2 252,506, 0,300, +,+, 642516 Satellite W-chromosome 585 chrUn_NT_466594v1 7259 9303 GGLTR7-int 539 - 7259 9303 0 2 75,1317, 0,727, -,-, 642529 LTR ERV1 585 chrUn_NT_466595v1 7304 7857 (CCTTG)n 533 + 7304 7857 0 3 192,161,30, 0,192,523, +,+,+, 642534 Simple_repeat Simple_repeat 585 chrUn_NT_466595v1 9659 10077 (CCTTG)n 525 + 9659 10077 0 2 179,208, 0,210, +,+, 642549 Simple_repeat Simple_repeat 585 chrUn_NT_466595v1 10527 11059 (CCTTG)n 527 + 10527 11059 0 3 93,93,143, 0,270,389, +,+,+, 642555 Simple_repeat Simple_repeat 585 chrUn_NT_466595v1 11042 14464 GGLTR7A 659 + 11042 14464 0 2 3106,98, 0,3324, +,+, 642557 LTR ERV1 585 chrUn_NT_466596v1 823 4099 GGXHOI 400 - 823 4099 0 4 1423,404,456,885, 0,1467,1915,2391, -,-,-,-, 642561 Satellite W-chromosome 585 chrUn_NT_466596v1 4183 11842 GGXHOI 392 - 4183 11842 0 9 905,441,1440,396,934,478,1366,920,578, 0,925,1383,2839,3280,4230,4755,6141,7081, -,-,-,-,-,-,-,-,-, 642562 Satellite W-chromosome 585 chrUn_NT_466596v1 12120 14890 GGXHOI 388 - 12120 14890 0 5 468,156,651,622,739, 0,485,698,1368,2031, -,-,-,-,-, 642563 Satellite W-chromosome 585 chrUn_NT_466597v1 3058 3613 CR1-H 557 - 3058 3613 0 2 136,413, 0,142, -,-, 642565 LINE CR1 585 chrUn_NT_466597v1 5692 6148 CR1-H 676 - 5692 6148 0 2 163,293, 0,163, -,-, 642568 LINE CR1 585 chrUn_NT_466598v1 7286 8685 GGLTR7-int 328 - 7286 8685 0 3 290,258,100, 0,1039,1299, -,-,-, 642577 LTR ERV1 585 chrUn_NT_466598v1 9416 12259 GGERVL-B-int 692 - 9416 12259 0 2 915,1928, 0,915, -,-, 642579 LTR ERVL 585 chrUn_NT_466599v1 1446 5945 GGXHOI 345 - 1446 5945 0 4 972,884,922,1578, 0,1035,1981,2921, -,-,-,-, 642587 Satellite W-chromosome 585 chrUn_NT_466599v1 8219 10283 GGXHOI 355 - 8219 10283 0 2 429,1572, 0,492, -,-, 642591 Satellite W-chromosome 585 chrUn_NT_466599v1 10752 13189 GGXHOI 345 - 10752 13189 0 2 1947,429, 0,2008, -,-, 642593 Satellite W-chromosome 585 chrUn_NT_466600v1 10405 12675 GGLTR7-int 437 + 10405 12675 0 4 390,357,117,482, 0,415,1589,1788, +,+,+,+, 642602 LTR ERV1 585 chrUn_NT_466600v1 12861 14896 GGLTR10D-int 857 - 12861 14896 0 2 352,1680, 0,355, -,-, 642606 LTR ERVK 585 chrUn_NT_466601v1 10914 14864 GGXHOI 412 - 10914 14864 0 6 934,572,637,269,1261,124, 0,952,1579,2256,2547,3826, -,-,-,-,-,-, 642618 Satellite W-chromosome 585 chrUn_NT_466602v1 5712 6934 GGXHOI 345 - 5712 6934 0 2 1030,174, 0,1048, -,-, 642621 Satellite W-chromosome 585 chrUn_NT_466602v1 8312 8774 GGXHOI 342 - 8312 8774 0 2 219,225, 0,237, -,-, 642624 Satellite W-chromosome 585 chrUn_NT_466602v1 8973 10817 GGXHOI 364 - 8973 10817 0 2 384,1397, 0,447, -,-, 642625 Satellite W-chromosome 585 chrUn_NT_466603v1 3052 5838 GGXHOI 395 - 3052 5838 0 7 128,122,618,182,1087,370,99, 0,140,305,948,1167,2269,2687, -,-,-,-,-,-,-, 642632 Satellite W-chromosome 585 chrUn_NT_466603v1 5955 6767 GGXHOI 335 - 5955 6767 0 2 243,550, 0,262, -,-, 642633 Satellite W-chromosome 585 chrUn_NT_466603v1 14386 14863 GGXHOI 340 - 14386 14863 0 2 257,197, 0,280, -,-, 642639 Satellite W-chromosome 585 chrUn_NT_466604v1 5748 14885 GGXHOI 416 - 5748 14885 0 12 315,1128,1054,982,1138,647,478,1163,980,146,259,630, 0,335,1483,2557,3559,4717,5375,5873,7056,8049,8210,8507, -,-,-,-,-,-,-,-,-,-,-,-, 642641 Satellite W-chromosome 585 chrUn_NT_466605v1 816 3361 GGXHOI 572 - 816 3361 0 4 529,785,332,28, 0,848,1841,2517, -,-,-,-, 642644 Satellite W-chromosome 585 chrUn_NT_466605v1 3450 7571 GGXHOI 557 - 3450 7571 0 4 440,123,69,811, 0,2672,3205,3310, -,-,-,-, 642646 Satellite W-chromosome 585 chrUn_NT_466605v1 7598 9411 GGXHOI 564 - 7598 9411 0 2 550,699, 0,1114, -,-, 642650 Satellite W-chromosome 585 chrUn_NT_466605v1 9469 14863 GGXHOI 568 - 9469 14863 0 7 280,209,16,325,249,251,689, 0,779,1797,2389,3279,3967,4705, -,-,-,-,-,-,-, 642653 Satellite W-chromosome 585 chrUn_NT_466606v1 1999 2989 GGXHOI 409 - 1999 2989 0 3 484,146,336, 0,497,654, -,-,-, 642663 Satellite W-chromosome 585 chrUn_NT_466606v1 4134 4879 GGXHOI 344 - 4134 4879 0 2 641,93, 0,652, -,-, 642665 Satellite W-chromosome 585 chrUn_NT_466606v1 5079 6074 GGXHOI 358 - 5079 6074 0 2 650,330, 0,665, -,-, 642666 Satellite W-chromosome 585 chrUn_NT_466606v1 6158 10373 GGXHOI 415 - 6158 10373 0 6 562,1177,859,146,1058,333, 0,584,1776,2648,2809,3882, -,-,-,-,-,-, 642667 Satellite W-chromosome 585 chrUn_NT_466606v1 10457 12524 GGXHOI 415 - 10457 12524 0 4 484,146,1060,334, 0,497,658,1733, -,-,-,-, 642668 Satellite W-chromosome 585 chrUn_NT_466606v1 12608 13597 GGXHOI 409 - 12608 13597 0 3 485,145,331, 0,498,658, -,-,-, 642669 Satellite W-chromosome 585 chrUn_NT_466606v1 13682 14882 GGXHOI 406 - 13682 14882 0 2 651,534, 0,666, -,-, 642670 Satellite W-chromosome 585 chrUn_NT_466607v1 502 7049 CR1-C4 555 - 502 7049 0 2 91,915, 0,5632, -,-, 642672 LINE CR1 585 chrUn_NT_466607v1 8148 8997 CR1-C 836 - 8148 8997 0 2 411,438, 0,411, -,-, 642679 LINE CR1 585 chrUn_NT_466608v1 1237 2112 Sat-CR1_GG 188 - 1237 2112 0 2 455,163, 0,712, -,-, 642688 Satellite Satellite 585 chrUn_NT_466608v1 2561 3463 Sat-CR1_GG 137 - 2561 3463 0 4 11,120,175,105, 0,227,387,797, -,-,-,-, 642692 Satellite Satellite 585 chrUn_NT_466608v1 13854 14428 Sat-CR1_GG 98 - 13854 14428 0 2 172,178, 0,396, -,-, 642723 Satellite Satellite 585 chrUn_NT_466609v1 4046 4693 CR1-H 643 - 4046 4693 0 2 142,489, 0,158, -,-, 642727 LINE CR1 585 chrUn_NT_466609v1 6824 8095 CR1-H 599 - 6824 8095 0 2 117,1154, 0,117, -,-, 642732 LINE CR1 585 chrUn_NT_466609v1 12091 12200 (TTTGC)n 326 + 12091 12200 0 2 52,8, 0,101, +,+, 642736 Simple_repeat Simple_repeat 585 chrUn_NT_466610v1 1560 6007 GGXHOI 588 - 1560 6007 0 5 406,514,277,148,1112, 0,1076,2208,2496,3335, -,-,-,-,-, 642742 Satellite W-chromosome 585 chrUn_NT_466610v1 6048 10723 GGXHOI 594 - 6048 10723 0 6 247,19,436,434,507,225, 0,258,1091,2207,3313,4450, -,-,-,-,-,-, 642747 Satellite W-chromosome 585 chrUn_NT_466610v1 11652 14838 GGXHOI 601 - 11652 14838 0 7 247,148,413,148,126,249,664, 0,258,964,1388,2095,2262,2522, -,-,-,-,-,-,-, 642753 Satellite W-chromosome 585 chrUn_NT_466611v1 74 2030 GGXHOI 399 - 74 2030 0 3 689,417,785, 0,708,1171, -,-,-, 642758 Satellite W-chromosome 585 chrUn_NT_466611v1 2060 2990 GGXHOI 394 - 2060 2990 0 2 629,256, 0,674, -,-, 642760 Satellite W-chromosome 585 chrUn_NT_466611v1 4776 5475 GGXHOI 403 - 4776 5475 0 2 185,492, 0,207, -,-, 642766 Satellite W-chromosome 585 chrUn_NT_466611v1 6630 7452 GGXHOI 410 - 6630 7452 0 2 305,496, 0,326, -,-, 642771 Satellite W-chromosome 585 chrUn_NT_466611v1 8629 9448 GGXHOI 405 - 8629 9448 0 2 307,491, 0,328, -,-, 642776 Satellite W-chromosome 585 chrUn_NT_466611v1 9481 9913 GGXHOI 394 - 9481 9913 0 2 302,108, 0,324, -,-, 642778 Satellite W-chromosome 585 chrUn_NT_466611v1 11128 12873 GGXHOI 388 - 11128 12873 0 3 611,259,813, 0,657,932, -,-,-, 642782 Satellite W-chromosome 585 chrUn_NT_466612v1 653 8009 GGXHOI 389 - 653 8009 0 8 1142,869,1396,149,136,456,499,2501, 0,1159,2060,3475,3641,3797,4311,4855, -,-,-,-,-,-,-,-, 642789 Satellite W-chromosome 585 chrUn_NT_466612v1 10730 14575 GGXHOI 389 - 10730 14575 0 3 948,2168,695, 0,971,3150, -,-,-, 642792 Satellite W-chromosome 585 chrUn_NT_466613v1 231 630 CR1-F 499 + 231 630 0 2 169,189, 0,210, +,+, 642794 LINE CR1 585 chrUn_NT_466613v1 671 10465 CR1-F 521 + 671 10465 0 30 197,191,200,203,204,204,152,203,150,191,203,204,203,155,195,187,199,203,199,203,153,199,188,198,202,203,204,155,199,161, 0,242,475,975,1220,1466,1936,2133,2376,2546,3036,3281,3527,3996,4440,4680,4909,5406,5651,5891,6360,6803,7046,7276,7755,7998,8243,8715,9158,9633, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 642795 LINE CR1 585 chrUn_NT_466613v1 10589 11185 CR1-F 461 + 10589 11185 0 3 192,104,122, 0,216,474, +,+,+, 642808 LINE CR1 585 chrUn_NT_466613v1 11228 14851 CR1-F 543 + 11228 14851 0 11 193,204,154,201,189,200,202,204,204,156,93, 0,235,703,1148,1394,1625,2124,2367,2613,3084,3530, +,+,+,+,+,+,+,+,+,+,+, 642809 LINE CR1 585 chrUn_NT_466615v1 2184 3300 CR1-B2 705 - 2184 3300 0 2 888,225, 0,891, -,-, 642849 LINE CR1 585 chrUn_NT_466616v1 1841 5991 GGXHOI 362 - 1841 5991 0 4 961,2354,137,649, 0,977,3346,3501, -,-,-,-, 642857 Satellite W-chromosome 585 chrUn_NT_466616v1 6126 14861 GGXHOI 469 - 6126 14861 0 9 927,1468,523,483,1018,1013,1806,481,874, 0,946,2432,2971,3470,4506,5540,7364,7861, -,-,-,-,-,-,-,-,-, 642858 Satellite W-chromosome 585 chrUn_NT_466617v1 9739 14755 GGXHOI 412 - 9739 14755 0 4 384,1093,1390,2039, 0,399,1534,2977, -,-,-,-, 642860 Satellite W-chromosome 585 chrUn_NT_466618v1 9320 14865 GGXHOI 363 - 9320 14865 0 11 209,908,763,529,225,370,472,155,225,577,868, 0,231,1156,1950,2501,2779,3165,3651,3831,4077,4677, -,-,-,-,-,-,-,-,-,-,-, 642862 Satellite W-chromosome 585 chrUn_NT_466620v1 4637 6394 GGERVL-A-int 750 - 4637 6394 0 2 1300,457, 0,1300, -,-, 642877 LTR ERVL 585 chrUn_NT_466621v1 1028 2160 GGXHOI 380 - 1028 2160 0 3 215,146,733, 0,238,399, -,-,-, 642882 Satellite W-chromosome 585 chrUn_NT_466621v1 2226 3676 GGXHOI 400 - 2226 3676 0 2 359,1071, 0,379, -,-, 642883 Satellite W-chromosome 585 chrUn_NT_466621v1 3742 5247 GGXHOI 377 - 3742 5247 0 2 1334,156, 0,1349, -,-, 642884 Satellite W-chromosome 585 chrUn_NT_466621v1 5497 6560 GGXHOI 379 - 5497 6560 0 3 345,535,148, 0,359,915, -,-,-, 642885 Satellite W-chromosome 585 chrUn_NT_466621v1 8843 9463 (CCTTG)n 484 + 8843 9463 0 2 193,415, 0,205, +,+, 642892 Simple_repeat Simple_repeat 585 chrUn_NT_466621v1 9576 10018 (CCTTG)n 568 + 9576 10018 0 2 212,186, 0,256, +,+, 642894 Simple_repeat Simple_repeat 585 chrUn_NT_466621v1 9948 10283 (GCCTG)n 478 + 9948 10283 0 2 105,52, 0,283, +,+, 642895 Simple_repeat Simple_repeat 585 chrUn_NT_466621v1 10325 10633 (GCCTG)n 428 + 10325 10633 0 2 63,52, 0,256, +,+, 642898 Simple_repeat Simple_repeat 585 chrUn_NT_466621v1 10615 11026 (CCTTG)n 493 + 10615 11026 0 2 196,184, 0,227, +,+, 642900 Simple_repeat Simple_repeat 585 chrUn_NT_466621v1 11847 12473 (CCTTG)n 466 + 11847 12473 0 2 404,192, 0,434, +,+, 642904 Simple_repeat Simple_repeat 585 chrUn_NT_466621v1 12572 13975 (CCTTG)n 500 + 12572 13975 0 4 180,736,188,194, 0,208,983,1209, +,+,+,+, 642906 Simple_repeat Simple_repeat 585 chrUn_NT_466622v1 1865 2176 CR1-X 489 + 1865 2176 0 3 173,78,57, 0,173,254, +,+,+, 642912 LINE CR1 585 chrUn_NT_466622v1 11109 12234 CR1-B2 667 - 11109 12234 0 2 901,221, 0,904, -,-, 642920 LINE CR1 585 chrUn_NT_466623v1 8099 8347 CR1-X 511 + 8099 8347 0 2 171,77, 0,171, +,+, 642932 LINE CR1 585 chrUn_NT_466623v1 13918 14850 CR1-B2 642 + 13918 14850 0 2 214,715, 0,217, +,+, 642937 LINE CR1 585 chrUn_NT_466624v1 11066 12201 CR1-F2 874 - 11066 12201 0 2 481,654, 0,481, -,-, 642949 LINE CR1 585 chrUn_NT_466624v1 13036 13373 (CAAGG)n 590 + 13036 13373 0 2 95,64, 0,273, +,+, 642952 Simple_repeat Simple_repeat 585 chrUn_NT_466625v1 3753 4114 CR1-H 539 - 3753 4114 0 2 183,91, 0,270, -,-, 642962 LINE CR1 585 chrUn_NT_466625v1 5994 6617 CR1-H 372 - 5994 6617 0 2 379,208, 0,415, -,-, 642966 LINE CR1 585 chrUn_NT_466625v1 12539 12810 CR1-H 443 - 12539 12810 0 2 142,88, 0,183, -,-, 642976 LINE CR1 585 chrUn_NT_466625v1 14345 14842 CR1-H 446 - 14345 14842 0 2 292,170, 0,327, -,-, 642978 LINE CR1 585 chrUn_NT_466627v1 3290 5625 GGXHOI 379 - 3290 5625 0 3 339,342,1616, 0,357,719, -,-,-, 642996 Satellite W-chromosome 585 chrUn_NT_466627v1 5710 12110 GGXHOI 420 - 5710 12110 0 6 575,2876,479,758,1347,234, 0,627,3519,4020,4800,6166, -,-,-,-,-,-, 642997 Satellite W-chromosome 585 chrUn_NT_466627v1 12428 14126 GGXHOI 392 - 12428 14126 0 2 1510,138, 0,1560, -,-, 642999 Satellite W-chromosome 585 chrUn_NT_466627v1 14211 14820 GGXHOI 471 - 14211 14820 0 2 225,338, 0,271, -,-, 643000 Satellite W-chromosome 585 chrUn_NT_466628v1 1746 5871 GGXHOI 423 - 1746 5871 0 3 1667,1560,844, 0,1695,3281, -,-,-, 643003 Satellite W-chromosome 585 chrUn_NT_466628v1 6985 7353 GGXHOI 413 - 6985 7353 0 2 106,240, 0,128, -,-, 643006 Satellite W-chromosome 585 chrUn_NT_466628v1 10888 11313 GGXHOI 416 - 10888 11313 0 2 240,150, 0,275, -,-, 643010 Satellite W-chromosome 585 chrUn_NT_466628v1 13254 13679 GGXHOI 414 - 13254 13679 0 2 226,145, 0,280, -,-, 643014 Satellite W-chromosome 585 chrUn_NT_466629v1 4067 14818 GGXHOI 401 - 4067 14818 0 12 1977,421,586,484,1059,1005,1340,467,1076,1532,215,269, 0,2006,2443,3088,3602,4681,5702,7099,7580,8673,10220,10482, -,-,-,-,-,-,-,-,-,-,-,-, 643018 Satellite W-chromosome 585 chrUn_NT_466630v1 6777 14240 GGXHOI 385 - 6777 14240 0 3 486,4029,2870, 0,547,4593, -,-,-, 643020 Satellite W-chromosome 585 chrUn_NT_466631v1 2327 4084 GGERVL-A-int 734 + 2327 4084 0 2 462,1295, 0,462, +,+, 643024 LTR ERVL 585 chrUn_NT_466632v1 13757 14830 CR1-B 599 + 13757 14830 0 2 228,842, 0,231, +,+, 643038 LINE CR1 585 chrUn_NT_466633v1 3119 4061 GGXHOI 315 - 3119 4061 0 2 627,290, 0,652, -,-, 643041 Satellite W-chromosome 585 chrUn_NT_466633v1 8650 11787 GGXHOI 354 - 8650 11787 0 3 171,143,2771, 0,188,366, -,-,-, 643046 Satellite W-chromosome 585 chrUn_NT_466633v1 11882 14799 GGXHOI 369 - 11882 14799 0 2 505,2350, 0,567, -,-, 643047 Satellite W-chromosome 585 chrUn_NT_466634v1 1965 4486 GGXHOI 428 - 1965 4486 0 4 1286,507,343,294, 0,1313,1857,2227, -,-,-,-, 643051 Satellite W-chromosome 585 chrUn_NT_466634v1 4771 6226 GGXHOI 322 - 4771 6226 0 2 157,1260, 0,195, -,-, 643052 Satellite W-chromosome 585 chrUn_NT_466634v1 6720 7791 GGXHOI 397 - 6720 7791 0 2 539,505, 0,566, -,-, 643054 Satellite W-chromosome 585 chrUn_NT_466634v1 7855 9040 GGXHOI 399 - 7855 9040 0 2 636,512, 0,673, -,-, 643055 Satellite W-chromosome 585 chrUn_NT_466634v1 12508 14140 GGXHOI 441 - 12508 14140 0 3 290,150,1117, 0,325,515, -,-,-, 643061 Satellite W-chromosome 585 chrUn_NT_466635v1 4381 6130 GGERVL-A-int 738 + 4381 6130 0 2 455,1294, 0,455, +,+, 643067 LTR ERVL 585 chrUn_NT_466636v1 9691 10317 CR1-H 690 - 9691 10317 0 2 139,468, 0,158, -,-, 643088 LINE CR1 585 chrUn_NT_466636v1 13148 13605 CR1-H 686 - 13148 13605 0 2 163,294, 0,163, -,-, 643092 LINE CR1 585 chrUn_NT_466638v1 119 2306 GGXHOI 542 - 119 2306 0 4 396,148,742,203, 0,407,907,1984, -,-,-,-, 643108 Satellite W-chromosome 585 chrUn_NT_466638v1 2397 3472 GGXHOI 552 - 2397 3472 0 3 198,60,150, 0,479,925, -,-,-, 643111 Satellite W-chromosome 585 chrUn_NT_466638v1 3561 4643 GGXHOI 566 - 3561 4643 0 3 33,59,151, 0,478,931, -,-,-, 643114 Satellite W-chromosome 585 chrUn_NT_466638v1 4732 5819 GGXHOI 562 - 4732 5819 0 2 541,150, 0,937, -,-, 643117 Satellite W-chromosome 585 chrUn_NT_466638v1 6422 6984 GGXHOI 518 - 6422 6984 0 2 21,203, 0,359, -,-, 643120 Satellite W-chromosome 585 chrUn_NT_466638v1 7072 8174 GGXHOI 562 - 7072 8174 0 2 541,226, 0,876, -,-, 643122 Satellite W-chromosome 585 chrUn_NT_466638v1 8245 9340 GGXHOI 542 - 8245 9340 0 3 33,224,216, 0,317,879, -,-,-, 643124 Satellite W-chromosome 585 chrUn_NT_466638v1 9422 11714 GGXHOI 555 - 9422 11714 0 4 198,25,1214,167, 0,482,518,2125, -,-,-,-, 643127 Satellite W-chromosome 585 chrUn_NT_466638v1 12308 12887 GGXHOI 510 - 12308 12887 0 2 15,223, 0,356, -,-, 643131 Satellite W-chromosome 585 chrUn_NT_466638v1 12958 13981 GGXHOI 516 - 12958 13981 0 3 12,222,148, 0,312,875, -,-,-, 643133 Satellite W-chromosome 585 chrUn_NT_466638v1 14059 14820 GGXHOI 603 - 14059 14820 0 3 196,24,245, 0,477,516, -,-,-, 643136 Satellite W-chromosome 585 chrUn_NT_466643v1 1983 2606 CR1-H 678 - 1983 2606 0 2 139,478, 0,145, -,-, 643185 LINE CR1 585 chrUn_NT_466643v1 5076 6432 CR1-H 652 - 5076 6432 0 2 117,1239, 0,117, -,-, 643189 LINE CR1 585 chrUn_NT_466643v1 8176 8285 (TTTGC)n 326 + 8176 8285 0 2 52,8, 0,101, +,+, 643190 Simple_repeat Simple_repeat 585 chrUn_NT_466644v1 5619 6743 CR1-B2 683 + 5619 6743 0 2 223,898, 0,226, +,+, 643201 LINE CR1 585 chrUn_NT_466646v1 742 1793 GGXHOI 392 + 742 1793 0 2 472,516, 0,535, +,+, 643216 Satellite W-chromosome 585 chrUn_NT_466646v1 1892 2943 GGXHOI 392 + 1892 2943 0 2 472,516, 0,535, +,+, 643217 Satellite W-chromosome 585 chrUn_NT_466646v1 3042 4093 GGXHOI 392 + 3042 4093 0 2 472,516, 0,535, +,+, 643218 Satellite W-chromosome 585 chrUn_NT_466646v1 4192 5243 GGXHOI 392 + 4192 5243 0 2 472,516, 0,535, +,+, 643219 Satellite W-chromosome 585 chrUn_NT_466646v1 5342 6393 GGXHOI 392 + 5342 6393 0 2 472,516, 0,535, +,+, 643220 Satellite W-chromosome 585 chrUn_NT_466646v1 6492 7543 GGXHOI 392 + 6492 7543 0 2 472,516, 0,535, +,+, 643221 Satellite W-chromosome 585 chrUn_NT_466646v1 7642 9186 GGXHOI 387 + 7642 9186 0 2 472,1009, 0,535, +,+, 643222 Satellite W-chromosome 585 chrUn_NT_466647v1 4987 7225 GGERVL-A-int 798 + 4987 7225 0 3 1182,495,560, 0,1182,1678, +,+,+, 643230 LTR ERVL 585 chrUn_NT_466647v1 7211 10462 GGERVL-A-int 784 + 7211 10462 0 3 2198,492,560, 0,2198,2691, +,+,+, 643231 LTR ERVL 585 chrUn_NT_466647v1 10448 13134 GGLTR3F1 936 + 10448 13134 0 2 2193,493, 0,2193, +,+, 643232 LTR ERVL 585 chrUn_NT_466647v1 13138 14793 GGLTR3F1 924 + 13138 14793 0 2 1167,488, 0,1167, +,+, 643233 LTR ERVL 585 chrUn_NT_466648v1 2249 2386 (TATGGGGTTA)n 877 + 2249 2386 0 2 41,41, 0,96, +,+, 643240 Simple_repeat Simple_repeat 585 chrUn_NT_466648v1 8622 8941 (CTATGGGGCT)n 772 + 8622 8941 0 3 83,69,59, 0,137,260, +,+,+, 643243 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 984 1899 (CGAGG)n 537 + 984 1899 0 3 253,182,440, 0,281,475, +,+,+, 643253 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 4199 4369 (GGCGG)n 370 + 4199 4369 0 2 72,10, 0,160, +,+, 643266 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 4370 5100 (CGAGG)n 513 + 4370 5100 0 2 362,354, 0,376, +,+, 643268 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 5647 5855 (CGAGG)n 443 + 5647 5855 0 2 16,175, 0,33, +,+, 643274 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 5932 6522 (CGAGG)n 585 + 5932 6522 0 2 366,176, 0,414, +,+, 643276 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 8350 8945 (CGAGG)n 609 + 8350 8945 0 2 378,178, 0,417, +,+, 643282 Simple_repeat Simple_repeat 585 chrUn_NT_466649v1 10756 11397 (CGAGG)n 490 + 10756 11397 0 3 116,96,77, 0,293,564, +,+,+, 643291 Simple_repeat Simple_repeat 585 chrUn_NT_466651v1 8837 10594 GGERVL-A-int 754 + 8837 10594 0 2 457,1300, 0,457, +,+, 643308 LTR ERVL 585 chrUn_NT_466652v1 5050 6780 GGERVL-A-int 744 + 5050 6780 0 2 455,1275, 0,455, +,+, 643314 LTR ERVL 585 chrUn_NT_466653v1 2055 2963 GGXHOI 385 + 2055 2963 0 2 348,510, 0,398, +,+, 643323 Satellite W-chromosome 585 chrUn_NT_466653v1 3635 4274 GGXHOI 299 + 3635 4274 0 3 146,257,175, 0,163,464, +,+,+, 643325 Satellite W-chromosome 585 chrUn_NT_466653v1 9341 9949 (CAAGG)n 486 + 9341 9949 0 2 185,391, 0,217, +,+, 643333 Simple_repeat Simple_repeat 585 chrUn_NT_466653v1 10186 10835 (CCTTG)n 540 + 10186 10835 0 2 371,255, 0,394, +,+, 643335 Simple_repeat Simple_repeat 585 chrUn_NT_466653v1 11736 12371 (CAAGG)n 523 + 11736 12371 0 2 431,180, 0,455, +,+, 643338 Simple_repeat Simple_repeat 585 chrUn_NT_466653v1 12529 12791 (CCTTG)n 472 + 12529 12791 0 2 179,24, 0,238, +,+, 643341 Simple_repeat Simple_repeat 585 chrUn_NT_466653v1 12844 13496 (CCTTG)n 490 + 12844 13496 0 2 317,149, 0,503, +,+, 643343 Simple_repeat Simple_repeat 585 chrUn_NT_466654v1 8762 9367 (CATG)n 250 + 8762 9367 0 2 402,173, 0,432, +,+, 643359 Simple_repeat Simple_repeat 585 chrUn_NT_466654v1 10976 11241 (ACCCCATAGGG)n 415 - 10976 11241 0 2 116,119, 0,146, -,-, 643367 Satellite Satellite 585 chrUn_NT_466654v1 11558 11845 (ACCCCATAGGG)n 299 - 11558 11845 0 2 124,131, 0,156, -,-, 643368 Satellite Satellite 585 chrUn_NT_466654v1 12045 12995 (CATG)n 263 + 12045 12995 0 4 132,213,209,287, 0,160,423,663, +,+,+,+, 643369 Simple_repeat Simple_repeat 585 chrUn_NT_466654v1 13811 14111 (ACCCCATAGGG)n 368 - 13811 14111 0 2 129,120, 0,180, -,-, 643373 Satellite Satellite 585 chrUn_NT_466656v1 1053 1392 (CGAGG)n 502 + 1053 1392 0 2 118,41, 0,298, +,+, 643388 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 1501 2707 (CGAGG)n 503 + 1501 2707 0 3 149,383,486, 0,322,720, +,+,+, 643391 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 2761 3715 (CGAGG)n 563 + 2761 3715 0 3 176,224,464, 0,207,490, +,+,+, 643394 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 3873 4599 (CGAGG)n 524 + 3873 4599 0 3 117,211,187, 0,294,539, +,+,+, 643396 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 4912 5440 (CGAGG)n 556 + 4912 5440 0 2 321,178, 0,350, +,+, 643401 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 6039 7188 (CGAGG)n 531 + 6039 7188 0 3 179,691,79, 0,201,1070, +,+,+, 643406 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 7931 9013 (CGAGG)n 536 + 7931 9013 0 2 350,700, 0,382, +,+, 643411 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 9077 9485 (CGAGG)n 506 + 9077 9485 0 2 193,176, 0,232, +,+, 643412 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 10010 10405 (CGAGG)n 493 + 10010 10405 0 2 183,188, 0,207, +,+, 643416 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 10511 11065 (CGAGG)n 502 + 10511 11065 0 2 233,143, 0,411, +,+, 643418 Simple_repeat Simple_repeat 585 chrUn_NT_466656v1 11135 12281 (CGAGG)n 528 + 11135 12281 0 3 691,19,86, 0,862,1060, +,+,+, 643420 Simple_repeat Simple_repeat 585 chrUn_NT_466657v1 5919 7280 GGXHOI 525 - 5919 7280 0 3 155,750,376, 0,193,985, -,-,-, 643439 Satellite W-chromosome 585 chrUn_NT_466657v1 7348 8616 GGXHOI 538 - 7348 8616 0 2 1022,32, 0,1236, -,-, 643440 Satellite W-chromosome 585 chrUn_NT_466657v1 8860 10283 GGXHOI 491 - 8860 10283 0 3 354,654,213, 0,369,1210, -,-,-, 643442 Satellite W-chromosome 585 chrUn_NT_466657v1 11899 13353 GGXHOI 516 - 11899 13353 0 2 1027,208, 0,1246, -,-, 643447 Satellite W-chromosome 585 chrUn_NT_466658v1 3680 14785 GGXHOI 377 - 3680 14785 0 10 133,611,127,1443,2199,3077,1547,446,199,1132, 0,150,773,935,2400,4616,7718,9295,9755,9973, -,-,-,-,-,-,-,-,-,-, 643451 Satellite W-chromosome 585 chrUn_NT_466661v1 13292 13841 GGXHOI 392 + 13292 13841 0 2 383,133, 0,416, +,+, 643487 Satellite W-chromosome 585 chrUn_NT_466662v1 1714 2309 GGXHOI 384 - 1714 2309 0 2 268,310, 0,285, -,-, 643491 Satellite W-chromosome 585 chrUn_NT_466662v1 3260 4968 GGXHOI 368 - 3260 4968 0 4 646,263,382,284, 0,704,984,1424, -,-,-,-, 643493 Satellite W-chromosome 585 chrUn_NT_466662v1 5643 7397 GGXHOI 377 - 5643 7397 0 4 612,269,388,373, 0,651,937,1381, -,-,-,-, 643495 Satellite W-chromosome 585 chrUn_NT_466662v1 7526 9672 GGXHOI 348 - 7526 9672 0 3 675,845,513, 0,730,1633, -,-,-, 643496 Satellite W-chromosome 585 chrUn_NT_466662v1 11443 12822 GGXHOI 327 - 11443 12822 0 3 448,650,243, 0,464,1136, -,-,-, 643500 Satellite W-chromosome 585 chrUn_NT_466663v1 2883 3322 (CAGGC)n 611 + 2883 3322 0 2 179,255, 0,184, +,+, 643505 Simple_repeat Simple_repeat 585 chrUn_NT_466663v1 3409 4221 (CAGGC)n 553 + 3409 4221 0 4 183,211,33,197, 0,187,582,615, +,+,+,+, 643507 Simple_repeat Simple_repeat 585 chrUn_NT_466663v1 4155 4654 (CAAGG)n 662 + 4155 4654 0 2 262,60, 0,439, +,+, 643509 Simple_repeat Simple_repeat 585 chrUn_NT_466663v1 4656 7463 GGERV28_I-int 612 - 4656 7463 0 4 477,294,78,133, 0,477,2453,2674, -,-,-,-, 643511 LTR ERVK 585 chrUn_NT_466663v1 5885 6726 GGLTR7-int 779 - 5885 6726 0 3 352,272,212, 0,352,629, -,-,-, 643512 LTR ERV1 585 chrUn_NT_466663v1 12178 12584 GGLTR7A 683 - 12178 12584 0 2 337,69, 0,337, -,-, 643517 LTR ERV1 585 chrUn_NT_466664v1 3472 3834 (CGAGG)n 564 + 3472 3834 0 2 172,176, 0,186, +,+, 643540 Simple_repeat Simple_repeat 585 chrUn_NT_466664v1 3924 4352 (CGAGG)n 560 + 3924 4352 0 2 179,231, 0,197, +,+, 643542 Simple_repeat Simple_repeat 585 chrUn_NT_466664v1 4503 5103 (CGAGG)n 450 + 4503 5103 0 3 215,23,298, 0,267,302, +,+,+, 643544 Simple_repeat Simple_repeat 585 chrUn_NT_466664v1 5205 5909 (CGAGG)n 537 + 5205 5909 0 2 297,359, 0,345, +,+, 643547 Simple_repeat Simple_repeat 585 chrUn_NT_466664v1 6048 6419 (CGAGG)n 536 + 6048 6419 0 2 178,176, 0,195, +,+, 643549 Simple_repeat Simple_repeat 585 chrUn_NT_466664v1 11648 12249 (CGAGG)n 522 + 11648 12249 0 2 412,174, 0,427, +,+, 643567 Simple_repeat Simple_repeat 585 chrUn_NT_466664v1 12413 14135 (CGAGG)n 511 + 12413 14135 0 4 526,180,174,741, 0,552,789,981, +,+,+,+, 643568 Simple_repeat Simple_repeat 585 chrUn_NT_466666v1 7175 9736 GGXHOI 394 - 7175 9736 0 3 577,1048,901, 0,597,1660, -,-,-, 643626 Satellite W-chromosome 585 chrUn_NT_466666v1 9833 10852 GGXHOI 418 - 9833 10852 0 2 821,178, 0,841, -,-, 643627 Satellite W-chromosome 585 chrUn_NT_466666v1 11048 12531 GGXHOI 407 - 11048 12531 0 3 346,934,162, 0,367,1321, -,-,-, 643628 Satellite W-chromosome 585 chrUn_NT_466666v1 13135 14762 GGXHOI 405 - 13135 14762 0 2 805,802, 0,825, -,-, 643630 Satellite W-chromosome 585 chrUn_NT_466667v1 2516 3418 GGXHOI 383 - 2516 3418 0 2 195,672, 0,230, -,-, 643634 Satellite W-chromosome 585 chrUn_NT_466667v1 3482 4218 GGXHOI 338 - 3482 4218 0 2 407,315, 0,421, -,-, 643635 Satellite W-chromosome 585 chrUn_NT_466667v1 4305 5650 GGXHOI 400 - 4305 5650 0 2 388,942, 0,403, -,-, 643636 Satellite W-chromosome 585 chrUn_NT_466667v1 5770 9285 GGXHOI 410 - 5770 9285 0 4 447,146,2550,333, 0,460,617,3182, -,-,-,-, 643637 Satellite W-chromosome 585 chrUn_NT_466667v1 10020 11006 GGXHOI 365 - 10020 11006 0 2 639,332, 0,654, -,-, 643639 Satellite W-chromosome 585 chrUn_NT_466667v1 11089 12201 GGXHOI 375 - 11089 12201 0 3 318,157,542, 0,364,570, -,-,-, 643640 Satellite W-chromosome 585 chrUn_NT_466667v1 12664 13547 GGXHOI 370 - 12664 13547 0 2 723,146, 0,737, -,-, 643643 Satellite W-chromosome 585 chrUn_NT_466667v1 13806 14705 GGXHOI 373 - 13806 14705 0 2 286,568, 0,331, -,-, 643644 Satellite W-chromosome 585 chrUn_NT_466668v1 7053 8433 GGLTR7-int 298 - 7053 8433 0 3 278,311,101, 0,967,1279, -,-,-, 643653 LTR ERV1 585 chrUn_NT_466668v1 9167 11875 GGERVL-B-int 681 - 9167 11875 0 2 917,1791, 0,917, -,-, 643655 LTR ERVL 585 chrUn_NT_466668v1 13682 14721 GGLTR7A 783 - 13682 14721 0 2 582,456, 0,583, -,-, 643657 LTR ERV1 585 chrUn_NT_466669v1 134 537 (CGAGG)n 539 + 134 537 0 2 179,178, 0,225, +,+, 643660 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 1039 2459 (CGAGG)n 527 + 1039 2459 0 3 751,368,99, 0,777,1321, +,+,+, 643663 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 3012 4361 (CGAGG)n 554 + 3012 4361 0 4 286,534,99,177, 0,304,1016,1172, +,+,+,+, 643667 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 4430 5693 (CGAGG)n 494 + 4430 5693 0 2 734,351, 0,912, +,+, 643670 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 6295 6777 (CGAGG)n 578 + 6295 6777 0 2 255,178, 0,304, +,+, 643673 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 9143 11718 (CGAGG)n 521 + 9143 11718 0 6 715,245,460,227,388,433, 0,750,1015,1497,1739,2142, +,+,+,+,+,+, 643686 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 12041 12653 (CGAGG)n 512 + 12041 12653 0 2 269,328, 0,284, +,+, 643688 Simple_repeat Simple_repeat 585 chrUn_NT_466669v1 13324 14512 (CGAGG)n 538 + 13324 14512 0 5 363,227,99,81,178, 0,385,624,902,1010, +,+,+,+,+, 643694 Simple_repeat Simple_repeat 585 chrUn_NT_466670v1 2431 3342 GGXHOI 404 + 2431 3342 0 2 682,193, 0,718, +,+, 643702 Satellite W-chromosome 585 chrUn_NT_466670v1 3520 5416 GGXHOI 449 + 3520 5416 0 3 1069,247,522, 0,1091,1374, +,+,+, 643703 Satellite W-chromosome 585 chrUn_NT_466670v1 5594 6851 GGXHOI 441 + 5594 6851 0 2 293,945, 0,312, +,+, 643704 Satellite W-chromosome 585 chrUn_NT_466670v1 6916 9261 GGXHOI 436 + 6916 9261 0 4 433,1191,194,435, 0,452,1679,1910, +,+,+,+, 643705 Satellite W-chromosome 585 chrUn_NT_466670v1 9339 12249 GGXHOI 433 + 9339 12249 0 3 698,805,1347, 0,721,1563, +,+,+, 643706 Satellite W-chromosome 585 chrUn_NT_466670v1 12427 13408 GGXHOI 461 + 12427 13408 0 2 288,666, 0,315, +,+, 643707 Satellite W-chromosome 585 chrUn_NT_466670v1 13565 14591 GGXHOI 365 + 13565 14591 0 3 432,210,294, 0,464,732, +,+,+, 643708 Satellite W-chromosome 585 chrUn_NT_466671v1 628 14569 GGXHOI 491 - 628 14569 0 13 525,2182,880,2086,145,1388,1304,145,1390,609,679,145,2223, 0,542,2745,3639,5746,5912,7322,8648,8814,10226,10851,11552,11718, -,-,-,-,-,-,-,-,-,-,-,-,-, 643711 Satellite W-chromosome 585 chrUn_NT_466675v1 488 4245 GGXHOI 363 - 488 4245 0 2 3406,294, 0,3463, -,-, 643734 Satellite W-chromosome 585 chrUn_NT_466675v1 6533 9495 GGXHOI 395 - 6533 9495 0 4 1917,487,146,336, 0,1969,2469,2626, -,-,-,-, 643737 Satellite W-chromosome 585 chrUn_NT_466675v1 10390 11116 GGXHOI 436 - 10390 11116 0 2 559,148, 0,578, -,-, 643739 Satellite W-chromosome 585 chrUn_NT_466675v1 11455 12445 GGXHOI 417 - 11455 12445 0 3 559,148,249, 0,578,741, -,-,-, 643740 Satellite W-chromosome 585 chrUn_NT_466675v1 12870 13279 GGXHOI 419 - 12870 13279 0 2 147,247, 0,162, -,-, 643742 Satellite W-chromosome 585 chrUn_NT_466675v1 13396 14326 GGXHOI 361 - 13396 14326 0 2 624,291, 0,639, -,-, 643743 Satellite W-chromosome 585 chrUn_NT_466677v1 10511 14066 GGLTR7-int 424 - 10511 14066 0 4 277,947,1624,102, 0,324,1366,3453, -,-,-,-, 643771 LTR ERV1 585 chrUn_NT_466680v1 5460 6522 CR1-B2 683 - 5460 6522 0 2 834,225, 0,837, -,-, 643790 LINE CR1 585 chrUn_NT_466680v1 12257 13594 CR1-X 427 - 12257 13594 0 3 79,173,112, 0,79,1225, -,-,-, 643796 LINE CR1 585 chrUn_NT_466681v1 3211 3427 Char12Mar1_GG 531 - 3211 3427 0 2 42,174, 0,42, -,-, 643800 DNA hAT-Charlie 585 chrUn_NT_466681v1 8917 14721 GGLTR3A 813 - 8917 14721 0 2 527,5277, 0,527, -,-, 643803 LTR ERVL 585 chrUn_NT_466683v1 1677 3807 GGXHOI 416 - 1677 3807 0 4 761,642,272,382, 0,777,1458,1748, -,-,-,-, 643845 Satellite W-chromosome 585 chrUn_NT_466683v1 4870 10000 GGXHOI 404 - 4870 10000 0 4 1399,431,1462,1787, 0,1417,1863,3343, -,-,-,-, 643847 Satellite W-chromosome 585 chrUn_NT_466683v1 10213 11156 GGXHOI 398 - 10213 11156 0 2 748,179, 0,764, -,-, 643848 Satellite W-chromosome 585 chrUn_NT_466683v1 12857 13853 GGXHOI 437 - 12857 13853 0 2 664,314, 0,682, -,-, 643850 Satellite W-chromosome 585 chrUn_NT_466684v1 774 1444 GGXHOI 393 - 774 1444 0 2 317,307, 0,363, -,-, 643853 Satellite W-chromosome 585 chrUn_NT_466684v1 1914 14719 GGXHOI 414 - 1914 14719 0 14 550,1142,1142,1138,1139,148,976,1138,1124,1132,162,911,1152,672, 0,570,1732,2894,4052,5211,5373,6369,7527,8671,9823,10030,10961,12133, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 643855 Satellite W-chromosome 585 chrUn_NT_466685v1 14071 14253 (GCG)n 218 + 14071 14253 0 2 115,35, 0,147, +,+, 643881 Simple_repeat Simple_repeat 585 chrUn_NT_466686v1 11919 14279 GGXHOI 396 - 11919 14279 0 4 148,363,1231,486, 0,205,595,1874, -,-,-,-, 643891 Satellite W-chromosome 585 chrUn_NT_466687v1 2169 9881 GGXHOI 395 - 2169 9881 0 11 1984,628,508,229,784,1091,257,152,344,299,1137, 0,2006,2657,3188,3429,4276,5379,5685,5893,6260,6575, -,-,-,-,-,-,-,-,-,-,-, 643893 Satellite W-chromosome 585 chrUn_NT_466687v1 9955 11524 GGXHOI 373 - 9955 11524 0 4 100,950,298,150, 0,137,1099,1419, -,-,-,-, 643894 Satellite W-chromosome 585 chrUn_NT_466687v1 11617 14710 GGXHOI 379 - 11617 14710 0 7 135,147,300,738,737,501,408, 0,148,318,663,1413,2166,2685, -,-,-,-,-,-,-, 643895 Satellite W-chromosome 585 chrUn_NT_466688v1 2148 5030 GGXHOI 408 - 2148 5030 0 2 2311,526, 0,2356, -,-, 643899 Satellite W-chromosome 585 chrUn_NT_466688v1 6856 8375 GGXHOI 327 - 6856 8375 0 2 205,929, 0,590, -,-, 643903 Satellite W-chromosome 585 chrUn_NT_466688v1 8865 10263 GGXHOI 419 - 8865 10263 0 2 826,525, 0,873, -,-, 643909 Satellite W-chromosome 585 chrUn_NT_466688v1 10439 12350 GGXHOI 361 - 10439 12350 0 2 1265,619, 0,1292, -,-, 643910 Satellite W-chromosome 585 chrUn_NT_466689v1 552 2984 GGLTR3F1 708 - 552 2984 0 2 1936,495, 0,1937, -,-, 643918 LTR ERVL 585 chrUn_NT_466689v1 10457 10974 GGLTR3F1 766 + 10457 10974 0 2 404,75, 0,442, +,+, 643925 LTR ERVL 585 chrUn_NT_466690v1 7542 8871 GGXHOI 593 - 7542 8871 0 3 247,148,250, 0,258,1079, -,-,-, 643938 Satellite W-chromosome 585 chrUn_NT_466690v1 9802 13590 GGXHOI 596 - 9802 13590 0 7 247,146,299,148,569,299,148, 0,258,1078,1388,2089,3330,3640, -,-,-,-,-,-,-, 643941 Satellite W-chromosome 585 chrUn_NT_466691v1 4133 5550 GGLTR7-int 373 + 4133 5550 0 3 59,243,230, 0,87,1187, +,+,+, 643950 LTR ERV1 585 chrUn_NT_466691v1 11684 11943 (ATCCCA)n 378 + 11684 11943 0 2 18,160, 0,99, +,+, 643957 Simple_repeat Simple_repeat 585 chrUn_NT_466692v1 1894 2406 Sat-CR1_GG 178 + 1894 2406 0 2 62,256, 0,256, +,+, 643965 Satellite Satellite 585 chrUn_NT_466692v1 2293 2609 GGXHOI 298 . 2293 2609 0 2 143,154, 0,162, +,-, 643967 Satellite W-chromosome 585 chrUn_NT_466692v1 3780 4293 Sat-CR1_GG 178 + 3780 4293 0 2 63,257, 0,256, +,+, 643970 Satellite Satellite 585 chrUn_NT_466692v1 4180 4496 GGXHOI 298 . 4180 4496 0 2 143,154, 0,162, +,-, 643972 Satellite W-chromosome 585 chrUn_NT_466692v1 5670 6183 Sat-CR1_GG 176 + 5670 6183 0 2 64,256, 0,257, +,+, 643975 Satellite Satellite 585 chrUn_NT_466692v1 6070 6386 GGXHOI 298 . 6070 6386 0 2 143,154, 0,162, +,-, 643977 Satellite W-chromosome 585 chrUn_NT_466692v1 7558 8073 Sat-CR1_GG 178 + 7558 8073 0 2 65,257, 0,258, +,+, 643980 Satellite Satellite 585 chrUn_NT_466692v1 7960 8276 GGXHOI 298 . 7960 8276 0 2 143,154, 0,162, +,-, 643982 Satellite W-chromosome 585 chrUn_NT_466692v1 9450 9965 Sat-CR1_GG 178 + 9450 9965 0 2 65,257, 0,258, +,+, 643985 Satellite Satellite 585 chrUn_NT_466692v1 9852 10168 GGXHOI 298 . 9852 10168 0 2 143,154, 0,162, +,-, 643987 Satellite W-chromosome 585 chrUn_NT_466692v1 11338 11852 Sat-CR1_GG 210 + 11338 11852 0 2 65,257, 0,257, +,+, 643990 Satellite Satellite 585 chrUn_NT_466692v1 11739 12055 GGXHOI 298 . 11739 12055 0 2 143,154, 0,162, +,-, 643992 Satellite W-chromosome 585 chrUn_NT_466692v1 13212 13499 Sat-CR1_GG 174 + 13212 13499 0 2 71,23, 0,264, +,+, 643995 Satellite Satellite 585 chrUn_NT_466693v1 1148 1214 (TTGTTT)n 296 + 1148 1214 0 2 21,14, 0,52, +,+, 644004 Simple_repeat Simple_repeat 585 chrUn_NT_466693v1 1354 1525 (GTTATTTCC)n 788 + 1354 1525 0 2 64,53, 0,118, +,+, 644006 Simple_repeat Simple_repeat 585 chrUn_NT_466693v1 4849 5022 (GTTATTTCC)n 837 + 4849 5022 0 2 66,53, 0,120, +,+, 644018 Simple_repeat Simple_repeat 585 chrUn_NT_466693v1 7662 7835 (GTTATTTCC)n 837 + 7662 7835 0 2 66,53, 0,120, +,+, 644028 Simple_repeat Simple_repeat 585 chrUn_NT_466693v1 8998 9171 (GTTATTTCC)n 820 + 8998 9171 0 2 66,53, 0,120, +,+, 644034 Simple_repeat Simple_repeat 585 chrUn_NT_466693v1 10558 10731 (GTTATTTCC)n 820 + 10558 10731 0 2 66,53, 0,120, +,+, 644039 Simple_repeat Simple_repeat 585 chrUn_NT_466695v1 3711 5454 GGERVL-A-int 752 - 3711 5454 0 2 1286,457, 0,1286, -,-, 644068 LTR ERVL 585 chrUn_NT_466696v1 4341 12594 GGXHOI 411 - 4341 12594 0 8 1049,2302,1055,1096,151,2056,280,105, 0,1065,3384,4455,5568,5733,7845,8148, -,-,-,-,-,-,-,-, 644076 Satellite W-chromosome 585 chrUn_NT_466696v1 12782 13104 GGXHOI 311 - 12782 13104 0 2 135,172, 0,150, -,-, 644077 Satellite W-chromosome 585 chrUn_NT_466696v1 13208 13799 GGXHOI 337 - 13208 13799 0 2 233,298, 0,293, -,-, 644078 Satellite W-chromosome 585 chrUn_NT_466697v1 4213 4789 (GGATG)n 641 + 4213 4789 0 2 351,189, 0,387, +,+, 644089 Simple_repeat Simple_repeat 585 chrUn_NT_466698v1 3338 3963 GGERV28_I-int 358 + 3338 3963 0 3 103,137,61, 0,268,564, +,+,+, 644107 LTR ERVK 585 chrUn_NT_466700v1 9128 10172 CR1-F0 874 - 9128 10172 0 2 437,607, 0,437, -,-, 644130 LINE CR1 585 chrUn_NT_466700v1 10193 10634 (CCTTG)n 637 + 10193 10634 0 3 68,100,82, 0,81,359, +,+,+, 644131 Simple_repeat Simple_repeat 585 chrUn_NT_466700v1 12074 12469 GGLTR7A 806 + 12074 12469 0 2 172,223, 0,172, +,+, 644142 LTR ERV1 585 chrUn_NT_466700v1 12977 14016 GGLTR7A 784 + 12977 14016 0 2 451,587, 0,452, +,+, 644144 LTR ERV1 585 chrUn_NT_466702v1 11772 13172 GGLTR7-int 300 - 11772 13172 0 3 286,261,104, 0,1032,1296, -,-,-, 644163 LTR ERV1 585 chrUn_NT_466703v1 2033 2401 GGXHOI 374 + 2033 2401 0 2 108,208, 0,160, +,+, 644168 Satellite W-chromosome 585 chrUn_NT_466703v1 2750 6498 GGXHOI 388 + 2750 6498 0 5 997,1297,162,1110,90, 0,1022,2343,2527,3658, +,+,+,+,+, 644169 Satellite W-chromosome 585 chrUn_NT_466703v1 6629 7648 GGXHOI 358 + 6629 7648 0 2 159,828, 0,191, +,+, 644170 Satellite W-chromosome 585 chrUn_NT_466703v1 8098 10811 GGXHOI 325 + 8098 10811 0 2 1717,972, 0,1741, +,+, 644171 Satellite W-chromosome 585 chrUn_NT_466703v1 12992 13619 GGXHOI 283 + 12992 13619 0 2 171,402, 0,225, +,+, 644175 Satellite W-chromosome 585 chrUn_NT_466704v1 3553 4642 CR1-B 598 - 3553 4642 0 2 861,225, 0,864, -,-, 644179 LINE CR1 585 chrUn_NT_466706v1 1717 2476 (CAAGG)n 466 + 1717 2476 0 2 556,25, 0,734, +,+, 644203 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 3515 4265 (CAAGG)n 508 + 3515 4265 0 2 248,321, 0,429, +,+, 644209 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 5366 6183 (CAAGG)n 517 + 5366 6183 0 3 252,79,286, 0,432,531, +,+,+, 644216 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 6182 6856 (CCTTG)n 554 + 6182 6856 0 2 438,56, 0,618, +,+, 644218 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 7256 8065 (CAAGG)n 525 + 7256 8065 0 3 244,79,286, 0,424,523, +,+,+, 644221 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 8064 8736 (CCTTG)n 560 + 8064 8736 0 2 436,56, 0,616, +,+, 644223 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 9136 9945 (CAAGG)n 525 + 9136 9945 0 3 244,79,286, 0,424,523, +,+,+, 644226 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 9944 10617 (CCTTG)n 552 + 9944 10617 0 2 437,56, 0,617, +,+, 644228 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 11261 11826 (CAAGG)n 533 + 11261 11826 0 3 259,97,25, 0,259,540, +,+,+, 644233 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 11825 12499 (CCTTG)n 558 + 11825 12499 0 3 234,15,56, 0,423,618, +,+,+, 644235 Simple_repeat Simple_repeat 585 chrUn_NT_466706v1 13143 13693 (CAAGG)n 501 + 13143 13693 0 3 179,152,23, 0,192,527, +,+,+, 644240 Simple_repeat Simple_repeat 585 chrUn_NT_466708v1 7041 14571 GGXHOI 420 - 7041 14571 0 3 3493,1489,2473, 0,3515,5057, -,-,-, 644245 Satellite W-chromosome 585 chrUn_NT_466709v1 471 629 (GTTGTTTCC)n 922 + 471 629 0 2 64,43, 0,115, +,+, 644248 Simple_repeat Simple_repeat 585 chrUn_NT_466709v1 2715 2871 (GTTGTTTCC)n 1000 + 2715 2871 0 2 60,42, 0,114, +,+, 644258 Simple_repeat Simple_repeat 585 chrUn_NT_466709v1 2996 3206 (GTTGTTTCC)n 953 + 2996 3206 0 2 95,65, 0,145, +,+, 644259 Simple_repeat Simple_repeat 585 chrUn_NT_466709v1 5440 5701 (GTTATTTCC)n 927 + 5440 5701 0 3 48,57,47, 0,102,214, +,+,+, 644262 Simple_repeat Simple_repeat 585 chrUn_NT_466709v1 7360 7654 (GTTATTTCC)n 843 + 7360 7654 0 2 173,66, 0,228, +,+, 644265 Simple_repeat Simple_repeat 585 chrUn_NT_466709v1 10393 10538 (GTTATTTCC)n 884 + 10393 10538 0 2 42,53, 0,92, +,+, 644273 Simple_repeat Simple_repeat 585 chrUn_NT_466710v1 2761 5001 (CTCTATGGGG)n 501 - 2761 5001 0 6 63,117,191,129,452,238, 0,1049,1177,1399,1539,2002, -,-,-,-,-,-, 644292 Satellite Satellite 585 chrUn_NT_466710v1 3218 3788 (CTCTATGGGG)n 525 - 3218 3788 0 2 117,441, 0,129, -,-, 644297 Satellite Satellite 585 chrUn_NT_466710v1 9644 10040 (CATG)n 107 + 9644 10040 0 2 180,176, 0,220, +,+, 644310 Simple_repeat Simple_repeat 585 chrUn_NT_466711v1 1150 1922 GGLTR11 169 - 1150 1922 0 2 326,196, 0,576, -,-, 644314 LTR ERV1 585 chrUn_NT_466711v1 11487 14124 CR1-D 660 - 11487 14124 0 3 1644,884,109, 0,1644,2528, -,-,-, 644322 LINE CR1 585 chrUn_NT_466711v1 14097 14639 CR1-D2 541 - 14097 14639 0 2 303,220, 0,322, -,-, 644323 LINE CR1 585 chrUn_NT_466713v1 5585 5882 CR1-X2 469 + 5585 5882 0 2 63,234, 0,63, +,+, 644337 LINE CR1 585 chrUn_NT_466714v1 7129 9559 GGLTR7-int 562 + 7129 9559 0 2 334,773, 0,1657, +,+, 644350 LTR ERV1 585 chrUn_NT_466714v1 9571 11974 GGERV10_LTR 874 - 9571 11974 0 2 38,41, 0,2362, -,-, 644353 LTR ERVL 585 chrUn_NT_466714v1 9735 11932 GGLTR10D-int 915 - 9735 11932 0 2 359,1835, 0,362, -,-, 644354 LTR ERVK 585 chrUn_NT_466714v1 11995 12386 (CGAGG)n 597 + 11995 12386 0 2 184,207, 0,184, +,+, 644355 Simple_repeat Simple_repeat 585 chrUn_NT_466714v1 12424 13203 (CGAGG)n 621 + 12424 13203 0 3 185,193,385, 0,201,394, +,+,+, 644357 Simple_repeat Simple_repeat 585 chrUn_NT_466714v1 13259 13671 (CGAGG)n 629 + 13259 13671 0 2 203,209, 0,203, +,+, 644359 Simple_repeat Simple_repeat 585 chrUn_NT_466714v1 13719 14625 (CGAGG)n 624 + 13719 14625 0 2 275,162, 0,744, +,+, 644361 Simple_repeat Simple_repeat 585 chrUn_NT_466715v1 3624 3699 (GCCC)n 368 + 3624 3699 0 2 6,41, 0,34, +,+, 644366 Simple_repeat Simple_repeat 585 chrUn_NT_466715v1 4233 6225 CR1-F 513 + 4233 6225 0 2 361,1175, 0,817, +,+, 644370 LINE CR1 585 chrUn_NT_466715v1 9356 11342 CR1-F 504 + 9356 11342 0 2 355,1184, 0,802, +,+, 644375 LINE CR1 585 chrUn_NT_466716v1 3573 6672 GGXHOI 382 - 3573 6672 0 4 467,684,729,451, 0,487,1896,2648, -,-,-,-, 644386 Satellite W-chromosome 585 chrUn_NT_466716v1 7416 8609 GGXHOI 397 - 7416 8609 0 2 721,449, 0,744, -,-, 644391 Satellite W-chromosome 585 chrUn_NT_466716v1 8638 10075 GGXHOI 346 - 8638 10075 0 2 1165,250, 0,1187, -,-, 644393 Satellite W-chromosome 585 chrUn_NT_466716v1 10956 11461 GGXHOI 305 - 10956 11461 0 2 271,178, 0,327, -,-, 644396 Satellite W-chromosome 585 chrUn_NT_466716v1 12112 13501 GGXHOI 375 - 12112 13501 0 3 230,678,445, 0,243,944, -,-,-, 644399 Satellite W-chromosome 585 chrUn_NT_466717v1 1747 2890 GGXHOI 410 + 1747 2890 0 2 939,149, 0,994, +,+, 644405 Satellite W-chromosome 585 chrUn_NT_466717v1 10137 11396 GGXHOI 380 + 10137 11396 0 3 142,476,565, 0,169,694, +,+,+, 644415 Satellite W-chromosome 585 chrUn_NT_466717v1 12739 14004 GGXHOI 407 + 12739 14004 0 2 888,352, 0,913, +,+, 644420 Satellite W-chromosome 585 chrUn_NT_466718v1 1177 2654 GGXHOI 410 - 1177 2654 0 2 724,733, 0,744, -,-, 644424 Satellite W-chromosome 585 chrUn_NT_466718v1 2848 3787 GGXHOI 319 - 2848 3787 0 2 668,222, 0,717, -,-, 644425 Satellite W-chromosome 585 chrUn_NT_466718v1 4030 14628 GGXHOI 404 - 4030 14628 0 11 234,976,977,975,972,974,966,974,1964,973,413, 0,254,1250,2247,3242,4234,5228,6214,7208,9192,10185, -,-,-,-,-,-,-,-,-,-,-, 644426 Satellite W-chromosome 585 chrUn_NT_466719v1 7916 9313 GGLTR7-int 323 - 7916 9313 0 3 281,261,99, 0,1035,1298, -,-,-, 644434 LTR ERV1 585 chrUn_NT_466719v1 10051 12937 GGERVL-B-int 665 - 10051 12937 0 2 941,1937, 0,949, -,-, 644436 LTR ERVL 585 chrUn_NT_466720v1 4336 7853 GGXHOI 570 + 4336 7853 0 2 653,2546, 0,971, +,+, 644444 Satellite W-chromosome 585 chrUn_NT_466720v1 7853 13170 Sat-CR1_GG 176 + 7853 13170 0 2 44,1263, 0,4054, +,+, 644445 Satellite Satellite 585 chrUn_NT_466720v1 7897 11907 GGXHOI 580 + 7897 11907 0 3 1367,393,1239, 0,1937,2771, +,+,+, 644446 Satellite W-chromosome 585 chrUn_NT_466722v1 844 3250 GGERV10_LTR 823 + 844 3250 0 2 41,38, 0,2368, +,+, 644455 LTR ERVL 585 chrUn_NT_466722v1 888 3083 GGLTR10D-int 905 + 888 3083 0 2 1830,362, 0,1833, +,+, 644456 LTR ERVK 585 chrUn_NT_466722v1 3262 5693 GGLTR7-int 592 - 3262 5693 0 2 792,335, 0,2096, -,-, 644457 LTR ERV1 585 chrUn_NT_466722v1 9459 9691 G-rich 381 + 9459 9691 0 2 38,147, 0,85, +,+, 644463 Low_complexity Low_complexity 585 chrUn_NT_466723v1 3830 6977 GGXHOI 361 - 3830 6977 0 3 1014,992,1045, 0,1077,2102, -,-,-, 644473 Satellite W-chromosome 585 chrUn_NT_466726v1 2555 4113 GGXHOI 333 + 2555 4113 0 2 1029,466, 0,1092, +,+, 644513 Satellite W-chromosome 585 chrUn_NT_466726v1 6157 7141 GGXHOI 331 + 6157 7141 0 2 321,646, 0,338, +,+, 644516 Satellite W-chromosome 585 chrUn_NT_466726v1 7245 9357 GGXHOI 373 + 7245 9357 0 2 1043,1006, 0,1106, +,+, 644517 Satellite W-chromosome 585 chrUn_NT_466726v1 12302 13920 GGXHOI 370 + 12302 13920 0 2 472,1083, 0,535, +,+, 644521 Satellite W-chromosome 585 chrUn_NT_466727v1 297 13864 GGXHOI 388 + 297 13864 0 4 4754,1758,3574,3295, 0,4816,6636,10272, +,+,+,+, 644524 Satellite W-chromosome 585 chrUn_NT_466728v1 14427 14536 (G)n 962 + 14427 14536 0 2 27,41, 0,68, +,+, 644532 Simple_repeat Simple_repeat 585 chrUn_NT_466729v1 4290 5687 GGXHOI 411 - 4290 5687 0 2 641,715, 0,682, -,-, 644541 Satellite W-chromosome 585 chrUn_NT_466729v1 6282 7216 GGXHOI 363 - 6282 7216 0 2 472,401, 0,533, -,-, 644543 Satellite W-chromosome 585 chrUn_NT_466729v1 7825 9111 GGXHOI 378 - 7825 9111 0 2 523,733, 0,553, -,-, 644546 Satellite W-chromosome 585 chrUn_NT_466729v1 12533 14612 GGXHOI 439 - 12533 14612 0 2 844,1188, 0,891, -,-, 644555 Satellite W-chromosome 585 chrUn_NT_466730v1 640 1397 (CAAGG)n 694 + 640 1397 0 3 179,176,371, 0,190,386, +,+,+, 644560 Simple_repeat Simple_repeat 585 chrUn_NT_466730v1 1413 3377 (CAAGG)n 645 + 1413 3377 0 6 191,691,194,179,233,68, 0,370,1061,1286,1476,1896, +,+,+,+,+,+, 644562 Simple_repeat Simple_repeat 585 chrUn_NT_466730v1 3536 4814 (CAAGG)n 625 + 3536 4814 0 4 185,375,101,236, 0,200,575,1042, +,+,+,+, 644566 Simple_repeat Simple_repeat 585 chrUn_NT_466730v1 6733 7420 (CCTCG)n 651 + 6733 7420 0 2 361,312, 0,375, +,+, 644571 Simple_repeat Simple_repeat 585 chrUn_NT_466730v1 9867 11822 GGXHOI 413 + 9867 11822 0 3 334,979,565, 0,391,1390, +,+,+, 644575 Satellite W-chromosome 585 chrUn_NT_466730v1 12029 12984 GGXHOI 411 + 12029 12984 0 2 334,564, 0,391, +,+, 644576 Satellite W-chromosome 585 chrUn_NT_466732v1 1910 4869 GGXHOI 532 - 1910 4869 0 2 1266,763, 0,2196, -,-, 644624 Satellite W-chromosome 585 chrUn_NT_466732v1 5162 7170 GGXHOI 564 - 5162 7170 0 2 162,1060, 0,948, -,-, 644629 Satellite W-chromosome 585 chrUn_NT_466732v1 7212 10446 GGXHOI 548 - 7212 10446 0 5 406,368,512,88,348, 0,660,1777,2530,2886, -,-,-,-,-, 644632 Satellite W-chromosome 585 chrUn_NT_466732v1 10889 12991 GGXHOI 556 - 10889 12991 0 2 36,1277, 0,825, -,-, 644637 Satellite W-chromosome 585 chrUn_NT_466732v1 13005 14418 GGXHOI 576 - 13005 14418 0 2 155,866, 0,547, -,-, 644640 Satellite W-chromosome 585 chrUn_NT_466733v1 1344 3230 GGXHOI 403 + 1344 3230 0 4 209,148,975,506, 0,224,384,1380, +,+,+,+, 644645 Satellite W-chromosome 585 chrUn_NT_466733v1 3312 5212 GGXHOI 369 + 3312 5212 0 4 395,309,869,251, 0,410,758,1649, +,+,+,+, 644646 Satellite W-chromosome 585 chrUn_NT_466733v1 7367 14588 GGXHOI 390 + 7367 14588 0 14 577,1225,1134,671,266,147,352,601,148,161,488,318,314,481, 0,592,1837,2991,3703,3984,4144,4542,5163,5324,5496,6008,6380,6740, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 644648 Satellite W-chromosome 585 chrUn_NT_466734v1 377 3525 GGXHOI 425 - 377 3525 0 6 471,146,908,146,1070,332, 0,496,653,1574,1731,2816, -,-,-,-,-,-, 644650 Satellite W-chromosome 585 chrUn_NT_466734v1 3608 4597 GGXHOI 393 - 3608 4597 0 2 641,337, 0,652, -,-, 644651 Satellite W-chromosome 585 chrUn_NT_466734v1 4681 6726 GGXHOI 373 - 4681 6726 0 4 643,682,265,401, 0,658,1358,1644, -,-,-,-, 644652 Satellite W-chromosome 585 chrUn_NT_466734v1 6807 7768 GGXHOI 392 - 6807 7768 0 3 551,148,228, 0,571,733, -,-,-, 644653 Satellite W-chromosome 585 chrUn_NT_466734v1 7869 8859 GGXHOI 390 - 7869 8859 0 2 561,410, 0,580, -,-, 644654 Satellite W-chromosome 585 chrUn_NT_466734v1 8941 9932 GGXHOI 389 - 8941 9932 0 2 685,291, 0,700, -,-, 644655 Satellite W-chromosome 585 chrUn_NT_466734v1 10015 12087 GGXHOI 424 - 10015 12087 0 5 645,812,145,148,250, 0,660,1495,1659,1822, -,-,-,-,-, 644656 Satellite W-chromosome 585 chrUn_NT_466734v1 12172 14596 GGXHOI 432 - 12172 14596 0 5 488,146,905,146,692, 0,501,658,1575,1732, -,-,-,-,-, 644657 Satellite W-chromosome 585 chrUn_NT_466735v1 351 2671 GGLTR3F1 682 - 351 2671 0 2 1837,482, 0,1838, -,-, 644659 LTR ERVL 585 chrUn_NT_466736v1 3751 4848 GGXHOI 546 - 3751 4848 0 3 19,187,292, 0,330,805, -,-,-, 644678 Satellite W-chromosome 585 chrUn_NT_466736v1 4919 6050 GGXHOI 493 - 4919 6050 0 3 17,300,493, 0,316,638, -,-,-, 644681 Satellite W-chromosome 585 chrUn_NT_466736v1 6127 7184 GGXHOI 458 - 6127 7184 0 2 534,289, 0,768, -,-, 644683 Satellite W-chromosome 585 chrUn_NT_466736v1 7405 9481 GGXHOI 514 - 7405 9481 0 3 1040,207,488, 0,1347,1588, -,-,-, 644687 Satellite W-chromosome 585 chrUn_NT_466736v1 9555 10658 GGXHOI 482 - 9555 10658 0 2 516,216, 0,887, -,-, 644689 Satellite W-chromosome 585 chrUn_NT_466736v1 10744 14602 GGXHOI 528 - 10744 14602 0 7 261,372,180,297,185,368,299, 0,548,1242,1780,2399,2870,3559, -,-,-,-,-,-,-, 644691 Satellite W-chromosome 585 chrUn_NT_466737v1 1808 2307 (CAAGG)n 549 + 1808 2307 0 2 173,283, 0,216, +,+, 644702 Simple_repeat Simple_repeat 585 chrUn_NT_466738v1 5137 8409 GGXHOI 370 - 5137 8409 0 2 1716,1496, 0,1776, -,-, 644706 Satellite W-chromosome 585 chrUn_NT_466738v1 10352 13644 GGXHOI 378 - 10352 13644 0 2 1755,1480, 0,1812, -,-, 644709 Satellite W-chromosome 585 chrUn_NT_466739v1 1731 2104 (CAAGG)n 433 + 1731 2104 0 2 177,185, 0,188, +,+, 644717 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 3043 3368 (GCCTG)n 388 + 3043 3368 0 2 100,41, 0,284, +,+, 644721 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 3741 4280 (CAAGG)n 589 + 3741 4280 0 3 46,224,243, 0,46,296, +,+,+, 644725 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 4542 5298 (CAAGG)n 514 + 4542 5298 0 2 270,144, 0,612, +,+, 644728 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 4812 5154 (CTAGG)n 355 + 4812 5154 0 2 146,194, 0,148, +,+, 644729 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 5479 6361 (CCTTG)n 479 + 5479 6361 0 3 222,308,30, 0,246,852, +,+,+, 644731 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 6717 7254 (CAAGG)n 595 + 6717 7254 0 3 46,223,242, 0,46,295, +,+,+, 644737 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 8455 9059 (CCTTG)n 531 + 8455 9059 0 2 225,353, 0,251, +,+, 644741 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 9693 10378 (CAAGG)n 625 + 9693 10378 0 3 40,183,402, 0,85,283, +,+,+, 644745 Simple_repeat Simple_repeat 585 chrUn_NT_466739v1 10461 11772 (CAAGG)n 487 + 10461 11772 0 6 166,372,213,94,68,139, 0,204,576,817,1087,1172, +,+,+,+,+,+, 644746 Simple_repeat Simple_repeat 585 chrUn_NT_466741v1 359 1218 GGXHOI 380 - 359 1218 0 2 357,447, 0,412, -,-, 644813 Satellite W-chromosome 585 chrUn_NT_466741v1 1381 3156 GGXHOI 382 - 1381 3156 0 3 358,908,410, 0,415,1365, -,-,-, 644814 Satellite W-chromosome 585 chrUn_NT_466741v1 12429 14544 GGXHOI 379 - 12429 14544 0 2 1351,748, 0,1367, -,-, 644829 Satellite W-chromosome 585 chrUn_NT_466742v1 918 1967 GGXHOI 379 - 918 1967 0 2 516,476, 0,573, -,-, 644831 Satellite W-chromosome 585 chrUn_NT_466742v1 3871 5415 GGXHOI 378 - 3871 5415 0 2 1009,472, 0,1072, -,-, 644834 Satellite W-chromosome 585 chrUn_NT_466742v1 5514 7965 GGXHOI 403 - 5514 7965 0 3 145,1147,1046, 0,195,1405, -,-,-, 644835 Satellite W-chromosome 585 chrUn_NT_466742v1 8790 9377 GGXHOI 352 - 8790 9377 0 2 183,389, 0,198, -,-, 644837 Satellite W-chromosome 585 chrUn_NT_466742v1 9476 10527 GGXHOI 378 - 9476 10527 0 2 516,472, 0,579, -,-, 644838 Satellite W-chromosome 585 chrUn_NT_466742v1 10626 12247 GGXHOI 387 - 10626 12247 0 2 516,1042, 0,579, -,-, 644839 Satellite W-chromosome 585 chrUn_NT_466743v1 498 2893 (CCTTG)n 605 + 498 2893 0 9 179,221,585,189,216,226,227,234,229, 0,179,400,985,1183,1416,1673,1900,2166, +,+,+,+,+,+,+,+,+, 644847 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 4027 5788 (CCTTG)n 617 + 4027 5788 0 6 190,425,34,179,192,466, 0,242,834,907,1086,1295, +,+,+,+,+,+, 644853 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 5887 6873 (CCTTG)n 577 + 5887 6873 0 3 536,238,184, 0,536,802, +,+,+, 644856 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 8116 8605 (CCTTG)n 609 + 8116 8605 0 2 260,180, 0,309, +,+, 644864 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 8629 9217 (CCTTG)n 609 + 8629 9217 0 3 179,189,220, 0,179,368, +,+,+, 644866 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 9863 11523 (CCTTG)n 497 + 9863 11523 0 5 194,176,514,201,467, 0,205,440,954,1193, +,+,+,+,+, 644869 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 11592 12288 (CCTTG)n 644 + 11592 12288 0 2 503,177, 0,519, +,+, 644871 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 12385 13233 (CCTTG)n 597 + 12385 13233 0 4 181,195,211,213, 0,181,376,635, +,+,+,+, 644873 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 13333 14098 (CCTTG)n 567 + 13333 14098 0 2 190,554, 0,211, +,+, 644876 Simple_repeat Simple_repeat 585 chrUn_NT_466743v1 14067 14418 (GCCTG)n 436 + 14067 14418 0 2 93,80, 0,271, +,+, 644877 Simple_repeat Simple_repeat 585 chrUn_NT_466744v1 7282 7981 CR1-B2 706 - 7282 7981 0 2 471,225, 0,474, -,-, 644892 LINE CR1 585 chrUn_NT_466746v1 4127 4634 GGXHOI 353 + 4127 4634 0 2 182,310, 0,197, +,+, 644901 Satellite W-chromosome 585 chrUn_NT_466746v1 13122 14034 GGXHOI 315 + 13122 14034 0 2 458,431, 0,481, +,+, 644916 Satellite W-chromosome 585 chrUn_NT_466747v1 3343 10108 Z-REP 838 - 3343 10108 0 3 5661,188,875, 0,5691,5890, -,-,-, 644919 Satellite macro 585 chrUn_NT_466747v1 10133 10476 CR1-F2 390 - 10133 10476 0 2 231,112, 0,231, -,-, 644921 LINE CR1 585 chrUn_NT_466749v1 883 10923 GGXHOI 473 - 883 10923 0 8 154,2996,144,1390,2213,1770,144,1084, 0,165,3178,3340,4783,7007,8794,8956, -,-,-,-,-,-,-,-, 644940 Satellite W-chromosome 585 chrUn_NT_466749v1 11513 14500 GGXHOI 405 - 11513 14500 0 4 1154,398,181,1185, 0,1167,1608,1802, -,-,-,-, 644943 Satellite W-chromosome 585 chrUn_NT_466750v1 13127 13822 (ACCCATAGAG)n 753 - 13127 13822 0 3 124,123,275, 0,255,420, -,-,-, 644951 Satellite Satellite 585 chrUn_NT_466750v1 13880 14307 (CTCTATGGGG)n 697 + 13880 14307 0 2 117,259, 0,168, +,+, 644954 Satellite Satellite 585 chrUn_NT_466750v1 14127 14531 (ACCCATAGAG)n 726 - 14127 14531 0 2 263,20, 0,384, -,-, 644955 Satellite Satellite 585 chrUn_NT_466751v1 2923 5294 GGLTR7-int 401 - 2923 5294 0 4 288,235,100,57, 0,1041,1302,2314, -,-,-,-, 644960 LTR ERV1 585 chrUn_NT_466751v1 5273 9619 GGLTR7A 826 + 5273 9619 0 2 3748,589, 0,3757, +,+, 644963 LTR ERV1 585 chrUn_NT_466751v1 11972 14514 GGERVL-B-int 711 + 11972 14514 0 4 297,64,1077,743, 0,657,722,1799, +,+,+,+, 644967 LTR ERVL 585 chrUn_NT_466752v1 4832 8222 GGXHOI 548 - 4832 8222 0 4 944,809,612,940, 0,959,1788,2450, -,-,-,-, 644973 Satellite W-chromosome 585 chrUn_NT_466753v1 10987 14514 GGXHOI 390 - 10987 14514 0 2 1542,1964, 0,1563, -,-, 644984 Satellite W-chromosome 585 chrUn_NT_466755v1 3766 6677 GGXHOI 341 - 3766 6677 0 8 268,260,299,184,553,376,413,421, 0,288,569,891,1098,1667,2061,2490, -,-,-,-,-,-,-,-, 644987 Satellite W-chromosome 585 chrUn_NT_466755v1 6755 10462 GGXHOI 401 - 6755 10462 0 5 1260,744,462,178,993, 0,1272,2039,2515,2714, -,-,-,-,-, 644988 Satellite W-chromosome 585 chrUn_NT_466755v1 10605 14540 GGXHOI 381 - 10605 14540 0 5 618,1158,553,743,798, 0,633,1806,2371,3137, -,-,-,-,-, 644989 Satellite W-chromosome 585 chrUn_NT_466756v1 487 8244 CR1-F 524 + 487 8244 0 23 203,187,200,203,204,204,155,201,189,172,199,204,204,155,199,166,198,214,200,181,156,200,214, 0,248,477,976,1221,1467,1935,2380,2621,2848,3309,3550,3796,4266,4711,4955,5149,5645,5906,6383,6608,7054,7543, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 644992 LINE CR1 585 chrUn_NT_466756v1 8533 9545 CR1-F 400 + 8533 9545 0 4 204,207,141,194, 0,245,496,818, +,+,+,+, 645004 LINE CR1 585 chrUn_NT_466756v1 9591 14529 CR1-F 516 + 9591 14529 0 14 204,203,203,204,204,155,200,184,199,203,204,203,154,204, 0,487,983,1228,1474,1945,2390,2634,2830,3329,3574,3820,4290,4734, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 645005 LINE CR1 585 chrUn_NT_466758v1 2053 3597 GGXHOI 379 - 2053 3597 0 2 1009,472, 0,1072, -,-, 645025 Satellite W-chromosome 585 chrUn_NT_466758v1 11901 13320 GGXHOI 377 - 11901 13320 0 2 509,848, 0,571, -,-, 645039 Satellite W-chromosome 585 chrUn_NT_466761v1 725 2016 GGXHOI 354 - 725 2016 0 4 468,361,175,240, 0,484,856,1051, -,-,-,-, 645062 Satellite W-chromosome 585 chrUn_NT_466761v1 3133 3697 GGXHOI 377 - 3133 3697 0 2 299,247, 0,317, -,-, 645065 Satellite W-chromosome 585 chrUn_NT_466761v1 3885 7480 GGXHOI 357 - 3885 7480 0 6 488,360,170,414,1274,760, 0,512,886,1071,1538,2835, -,-,-,-,-,-, 645066 Satellite W-chromosome 585 chrUn_NT_466761v1 9230 14532 GGXHOI 395 - 9230 14532 0 6 434,876,534,1586,1386,352, 0,451,1339,1893,3509,4950, -,-,-,-,-,-, 645068 Satellite W-chromosome 585 chrUn_NT_466762v1 4050 5101 GGXHOI 392 + 4050 5101 0 2 472,516, 0,535, +,+, 645073 Satellite W-chromosome 585 chrUn_NT_466762v1 5200 6251 GGXHOI 392 + 5200 6251 0 2 472,516, 0,535, +,+, 645074 Satellite W-chromosome 585 chrUn_NT_466762v1 6350 7401 GGXHOI 392 + 6350 7401 0 2 472,516, 0,535, +,+, 645075 Satellite W-chromosome 585 chrUn_NT_466762v1 7500 8551 GGXHOI 392 + 7500 8551 0 2 472,516, 0,535, +,+, 645076 Satellite W-chromosome 585 chrUn_NT_466762v1 8650 9701 GGXHOI 392 + 8650 9701 0 2 472,516, 0,535, +,+, 645077 Satellite W-chromosome 585 chrUn_NT_466762v1 9800 10851 GGXHOI 392 + 9800 10851 0 2 472,516, 0,535, +,+, 645078 Satellite W-chromosome 585 chrUn_NT_466762v1 10950 12001 GGXHOI 392 + 10950 12001 0 2 472,516, 0,535, +,+, 645079 Satellite W-chromosome 585 chrUn_NT_466762v1 12100 13644 GGXHOI 387 + 12100 13644 0 2 472,1009, 0,535, +,+, 645080 Satellite W-chromosome 585 chrUn_NT_466763v1 12084 13468 GGLTR7-int 279 - 12084 13468 0 3 282,301,99, 0,972,1285, -,-,-, 645092 LTR ERV1 585 chrUn_NT_466765v1 4755 5096 GGXHOI 378 - 4755 5096 0 2 145,137, 0,204, -,-, 645105 Satellite W-chromosome 585 chrUn_NT_466765v1 5354 10433 GGXHOI 376 - 5354 10433 0 6 1301,126,212,425,1523,1307, 0,1356,1521,1766,2226,3772, -,-,-,-,-,-, 645106 Satellite W-chromosome 585 chrUn_NT_466766v1 3626 5014 GGLTR7-int 290 - 3626 5014 0 3 280,314,101, 0,971,1287, -,-,-, 645112 LTR ERV1 585 chrUn_NT_466766v1 5750 8594 GGERVL-B-int 723 - 5750 8594 0 2 917,1927, 0,917, -,-, 645114 LTR ERVL 585 chrUn_NT_466766v1 11118 11508 (CAAGG)n 546 + 11118 11508 0 2 182,208, 0,182, +,+, 645119 Simple_repeat Simple_repeat 585 chrUn_NT_466766v1 12073 12907 (CAGGC)n 548 + 12073 12907 0 3 82,23,364, 0,269,470, +,+,+, 645123 Simple_repeat Simple_repeat 585 chrUn_NT_466766v1 12614 13028 (CAAGG)n 562 + 12614 13028 0 2 154,80, 0,334, +,+, 645126 Simple_repeat Simple_repeat 585 chrUn_NT_466766v1 13048 13924 CR1-F0 802 + 13048 13924 0 2 743,133, 0,743, +,+, 645128 LINE CR1 585 chrUn_NT_466768v1 3467 3926 GGXHOI 330 - 3467 3926 0 2 288,154, 0,305, -,-, 645138 Satellite W-chromosome 585 chrUn_NT_466768v1 4023 5091 GGXHOI 379 - 4023 5091 0 2 268,737, 0,331, -,-, 645139 Satellite W-chromosome 585 chrUn_NT_466768v1 12438 14495 GGXHOI 391 - 12438 14495 0 6 97,602,644,334,59,198, 0,113,749,1435,1781,1859, -,-,-,-,-,-, 645148 Satellite W-chromosome 585 chrUn_NT_466769v1 1348 2892 GGXHOI 375 + 1348 2892 0 2 472,1009, 0,535, +,+, 645151 Satellite W-chromosome 585 chrUn_NT_466769v1 4084 5693 GGXHOI 372 + 4084 5693 0 2 1033,513, 0,1096, +,+, 645153 Satellite W-chromosome 585 chrUn_NT_466769v1 9096 11438 GGXHOI 369 + 9096 11438 0 3 471,1135,632, 0,532,1710, +,+,+, 645159 Satellite W-chromosome 585 chrUn_NT_466769v1 11618 13810 GGXHOI 379 + 11618 13810 0 2 1047,1082, 0,1110, +,+, 645160 Satellite W-chromosome 585 chrUn_NT_466770v1 6768 8378 GGXHOI 401 - 6768 8378 0 3 558,150,791, 0,615,819, -,-,-, 645167 Satellite W-chromosome 585 chrUn_NT_466770v1 10223 14386 GGXHOI 415 - 10223 14386 0 3 311,440,3357, 0,335,806, -,-,-, 645170 Satellite W-chromosome 585 chrUn_NT_466771v1 3350 3828 GA-rich 384 + 3350 3828 0 2 142,319, 0,159, +,+, 645175 Low_complexity Low_complexity 585 chrUn_NT_466771v1 7675 7819 GA-rich 292 + 7675 7819 0 2 43,44, 0,100, +,+, 645180 Low_complexity Low_complexity 585 chrUn_NT_466771v1 10677 10820 GA-rich 316 + 10677 10820 0 2 43,64, 0,79, +,+, 645183 Low_complexity Low_complexity 585 chrUn_NT_466772v1 2820 3608 CR1-F 270 + 2820 3608 0 2 214,560, 0,228, +,+, 645194 LINE CR1 585 chrUn_NT_466772v1 6665 7153 CR1-Y4 606 - 6665 7153 0 2 288,195, 0,293, -,-, 645195 LINE CR1 585 chrUn_NT_466773v1 5673 6944 CR1-H 597 + 5673 6944 0 2 1158,113, 0,1158, +,+, 645206 LINE CR1 585 chrUn_NT_466773v1 8908 9531 CR1-H 671 + 8908 9531 0 2 478,139, 0,484, +,+, 645209 LINE CR1 585 chrUn_NT_466774v1 13348 13758 CR1-X2 352 - 13348 13758 0 2 195,198, 0,212, -,-, 645220 LINE CR1 585 chrUn_NT_466775v1 6775 10252 GGXHOI 415 + 6775 10252 0 3 796,2235,372, 0,854,3105, +,+,+, 645224 Satellite W-chromosome 585 chrUn_NT_466775v1 10488 13356 GGXHOI 421 + 10488 13356 0 2 1239,1601, 0,1267, +,+, 645225 Satellite W-chromosome 585 chrUn_NT_466776v1 1137 1593 CR1-F 543 + 1137 1593 0 2 202,211, 0,245, +,+, 645229 LINE CR1 585 chrUn_NT_466776v1 1636 3494 CR1-F 512 + 1636 3494 0 6 204,204,201,153,200,211, 0,246,492,959,1402,1647, +,+,+,+,+,+, 645230 LINE CR1 585 chrUn_NT_466776v1 3537 5393 CR1-F 508 + 3537 5393 0 6 203,202,204,155,200,211, 0,245,489,959,1404,1645, +,+,+,+,+,+, 645233 LINE CR1 585 chrUn_NT_466776v1 5436 7294 CR1-F 518 + 5436 7294 0 6 203,203,204,154,199,210, 0,245,490,960,1404,1648, +,+,+,+,+,+, 645236 LINE CR1 585 chrUn_NT_466776v1 7337 9194 CR1-F 516 + 7337 9194 0 6 203,203,204,155,199,208, 0,245,490,960,1405,1649, +,+,+,+,+,+, 645239 LINE CR1 585 chrUn_NT_466776v1 9237 12962 CR1-F 516 + 9237 12962 0 11 203,204,203,155,192,203,203,203,155,183,212, 0,245,491,959,1395,1886,2131,2376,2845,3285,3513, +,+,+,+,+,+,+,+,+,+,+, 645242 LINE CR1 585 chrUn_NT_466776v1 13005 14491 CR1-F 540 + 13005 14491 0 5 203,203,203,155,81, 0,245,490,960,1405, +,+,+,+,+, 645248 LINE CR1 585 chrUn_NT_466777v1 4498 4893 GGXHOI 363 - 4498 4893 0 2 195,149, 0,246, -,-, 645255 Satellite W-chromosome 585 chrUn_NT_466777v1 9413 10649 GGXHOI 365 - 9413 10649 0 2 803,414, 0,822, -,-, 645261 Satellite W-chromosome 585 chrUn_NT_466777v1 10740 13769 GGXHOI 372 - 10740 13769 0 5 430,266,226,497,1491, 0,447,741,1026,1538, -,-,-,-,-, 645262 Satellite W-chromosome 585 chrUn_NT_466778v1 14062 14486 CR1-B2 657 - 14062 14486 0 2 223,114, 0,310, -,-, 645278 LINE CR1 585 chrUn_NT_466780v1 540 2568 GGXHOI 332 - 540 2568 0 3 1431,268,242, 0,1489,1786, -,-,-, 645283 Satellite W-chromosome 585 chrUn_NT_466780v1 2948 6150 GGXHOI 339 - 2948 6150 0 3 1331,548,1221, 0,1372,1981, -,-,-, 645285 Satellite W-chromosome 585 chrUn_NT_466780v1 6412 6974 GGXHOI 354 - 6412 6974 0 2 272,273, 0,289, -,-, 645286 Satellite W-chromosome 585 chrUn_NT_466780v1 8858 9983 GGXHOI 343 - 8858 9983 0 2 498,565, 0,560, -,-, 645289 Satellite W-chromosome 585 chrUn_NT_466780v1 12394 12925 GGXHOI 274 - 12394 12925 0 2 219,258, 0,273, -,-, 645294 Satellite W-chromosome 585 chrUn_NT_466780v1 13823 14114 GGXHOI 340 - 13823 14114 0 2 184,91, 0,200, -,-, 645296 Satellite W-chromosome 585 chrUn_NT_466782v1 1314 3112 GGXHOI 377 - 1314 3112 0 2 1458,325, 0,1473, -,-, 645309 Satellite W-chromosome 585 chrUn_NT_466782v1 3195 8380 GGXHOI 373 - 3195 8380 0 3 2093,2727,283, 0,2113,4902, -,-,-, 645310 Satellite W-chromosome 585 chrUn_NT_466782v1 12289 14471 GGXHOI 375 - 12289 14471 0 2 845,1317, 0,865, -,-, 645315 Satellite W-chromosome 585 chrUn_NT_466783v1 13092 14465 GGXHOI 410 - 13092 14465 0 2 194,1155, 0,218, -,-, 645317 Satellite W-chromosome 585 chrUn_NT_466784v1 2834 3936 GGLTR7-int 276 + 2834 3936 0 3 81,255,279, 0,83,823, +,+,+, 645320 LTR ERV1 585 chrUn_NT_466784v1 13921 14485 (CCTTG)n 530 + 13921 14485 0 2 163,50, 0,514, +,+, 645331 Simple_repeat Simple_repeat 585 chrUn_NT_466786v1 4683 9864 CR1-C 828 + 4683 9864 0 2 3053,1519, 0,3662, +,+, 645359 LINE CR1 585 chrUn_NT_466787v1 5672 6453 GGXHOI 270 + 5672 6453 0 2 140,604, 0,177, +,+, 645373 Satellite W-chromosome 585 chrUn_NT_466787v1 8730 9764 GGXHOI 362 + 8730 9764 0 2 473,499, 0,535, +,+, 645377 Satellite W-chromosome 585 chrUn_NT_466788v1 4001 4623 CR1-H 675 - 4001 4623 0 2 139,477, 0,145, -,-, 645390 LINE CR1 585 chrUn_NT_466789v1 4547 4980 GGXHOI 300 - 4547 4980 0 3 120,117,124, 0,176,309, -,-,-, 645406 Satellite W-chromosome 585 chrUn_NT_466789v1 5648 6195 GGXHOI 423 - 5648 6195 0 2 372,136, 0,411, -,-, 645409 Satellite W-chromosome 585 chrUn_NT_466789v1 6320 7181 GGXHOI 424 - 6320 7181 0 2 512,338, 0,523, -,-, 645410 Satellite W-chromosome 585 chrUn_NT_466789v1 7514 8398 GGXHOI 291 - 7514 8398 0 3 124,491,233, 0,144,651, -,-,-, 645412 Satellite W-chromosome 585 chrUn_NT_466789v1 8505 12579 GGXHOI 317 - 8505 12579 0 10 126,204,247,901,855,315,764,112,124,173, 0,167,430,690,1636,2507,2839,3618,3761,3901, -,-,-,-,-,-,-,-,-,-, 645413 Satellite W-chromosome 585 chrUn_NT_466789v1 12676 13075 GGXHOI 351 - 12676 13075 0 2 241,147, 0,252, -,-, 645414 Satellite W-chromosome 585 chrUn_NT_466789v1 13155 14335 GGXHOI 379 - 13155 14335 0 2 277,842, 0,338, -,-, 645415 Satellite W-chromosome 585 chrUn_NT_466791v1 1544 10761 GGXHOI 368 - 1544 10761 0 8 320,3139,789,387,2265,478,850,784, 0,342,3521,4372,4781,7062,7559,8433, -,-,-,-,-,-,-,-, 645426 Satellite W-chromosome 585 chrUn_NT_466791v1 11209 13994 GGXHOI 353 - 11209 13994 0 2 1207,1518, 0,1267, -,-, 645427 Satellite W-chromosome 585 chrUn_NT_466792v1 1195 3389 GGXHOI 333 - 1195 3389 0 2 623,1553, 0,641, -,-, 645430 Satellite W-chromosome 585 chrUn_NT_466792v1 5375 7018 GGXHOI 353 - 5375 7018 0 2 556,1069, 0,574, -,-, 645432 Satellite W-chromosome 585 chrUn_NT_466792v1 7185 8828 GGXHOI 358 - 7185 8828 0 2 560,1065, 0,578, -,-, 645433 Satellite W-chromosome 585 chrUn_NT_466793v1 12316 14321 GGLTR7-int 542 + 12316 14321 0 3 537,758,50, 0,564,1955, +,+,+, 645448 LTR ERV1 585 chrUn_NT_466794v1 1074 4787 GGXHOI 389 - 1074 4787 0 3 1478,2033,139, 0,1521,3574, -,-,-, 645453 Satellite W-chromosome 585 chrUn_NT_466794v1 4881 9520 GGXHOI 367 - 4881 9520 0 4 1692,1475,647,700, 0,1754,3252,3939, -,-,-,-, 645454 Satellite W-chromosome 585 chrUn_NT_466794v1 10237 11850 GGXHOI 368 - 10237 11850 0 2 105,1492, 0,121, -,-, 645456 Satellite W-chromosome 585 chrUn_NT_466795v1 9041 11492 GGLTR7-int 590 + 9041 11492 0 2 337,783, 0,1668, +,+, 645477 LTR ERV1 585 chrUn_NT_466795v1 11504 13930 GGERV10_LTR 825 - 11504 13930 0 2 40,41, 0,2385, -,-, 645480 LTR ERVL 585 chrUn_NT_466795v1 11674 13888 GGLTR10D-int 912 - 11674 13888 0 2 370,1841, 0,373, -,-, 645481 LTR ERVK 585 chrUn_NT_466796v1 2239 4138 GGXHOI 353 - 2239 4138 0 2 1741,140, 0,1759, -,-, 645486 Satellite W-chromosome 585 chrUn_NT_466796v1 7327 8158 GGXHOI 343 - 7327 8158 0 2 261,513, 0,318, -,-, 645489 Satellite W-chromosome 585 chrUn_NT_466796v1 8980 10084 GGXHOI 350 - 8980 10084 0 2 574,508, 0,596, -,-, 645491 Satellite W-chromosome 585 chrUn_NT_466797v1 964 3155 GGXHOI 379 + 964 3155 0 4 216,391,1054,475, 0,237,648,1716, +,+,+,+, 645495 Satellite W-chromosome 585 chrUn_NT_466797v1 3389 14167 GGXHOI 415 + 3389 14167 0 10 414,1032,1139,1142,1143,1142,1141,1143,1139,1163, 0,434,1486,2645,3807,4970,6132,7293,8456,9615, +,+,+,+,+,+,+,+,+,+, 645496 Satellite W-chromosome 585 chrUn_NT_466798v1 3097 5583 GGERVL-B-int 769 + 3097 5583 0 3 316,1257,913, 0,316,1573, +,+,+, 645502 LTR ERVL 585 chrUn_NT_466798v1 6319 7714 GGLTR7-int 330 + 6319 7714 0 3 101,232,284, 0,103,1111, +,+,+, 645505 LTR ERV1 585 chrUn_NT_466799v1 10784 11406 CR1-H 683 - 10784 11406 0 2 139,477, 0,145, -,-, 645525 LINE CR1 585 chrUn_NT_466799v1 14086 14433 CR1-H 647 - 14086 14433 0 2 163,184, 0,163, -,-, 645529 LINE CR1 585 chrUn_NT_466800v1 11503 14435 GGLTR3F1 713 + 11503 14435 0 2 488,2438, 0,494, +,+, 645544 LTR ERVL 585 chrUn_NT_466801v1 5730 10793 GGXHOI 413 - 5730 10793 0 15 138,69,1379,156,319,257,129,132,299,410,421,181,176,54,594, 0,169,251,1657,1832,2169,2444,2590,2779,3090,3553,3985,4181,4378,4469, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 645546 Satellite W-chromosome 585 chrUn_NT_466801v1 11064 11648 (TTAGGG)n 568 + 11064 11648 0 2 187,374, 0,210, +,+, 645548 Simple_repeat Simple_repeat 585 chrUn_NT_466801v1 11750 13387 (TTAGGG)n 626 + 11750 13387 0 6 180,375,201,400,192,178, 0,192,567,816,1216,1459, +,+,+,+,+,+, 645550 Simple_repeat Simple_repeat 585 chrUn_NT_466802v1 12027 12223 G-rich 618 + 12027 12223 0 2 47,100, 0,96, +,+, 645573 Low_complexity Low_complexity 585 chrUn_NT_466802v1 14264 14362 (G)n 876 + 14264 14362 0 2 35,35, 0,63, +,+, 645575 Simple_repeat Simple_repeat 585 chrUn_NT_466803v1 7615 8404 CR1-F 272 - 7615 8404 0 2 560,215, 0,574, -,-, 645580 LINE CR1 585 chrUn_NT_466805v1 616 10623 GGXHOI 401 - 616 10623 0 6 5146,518,2307,138,517,1247, 0,5198,5739,8065,8220,8760, -,-,-,-,-,-, 645595 Satellite W-chromosome 585 chrUn_NT_466805v1 10979 14429 GGXHOI 390 - 10979 14429 0 6 372,989,144,832,855,167, 0,393,1399,1560,2406,3283, -,-,-,-,-,-, 645596 Satellite W-chromosome 585 chrUn_NT_466807v1 6198 7322 CR1-B2 694 - 6198 7322 0 2 896,225, 0,899, -,-, 645604 LINE CR1 585 chrUn_NT_466809v1 5790 6101 CR1-X 477 - 5790 6101 0 3 57,78,173, 0,60,138, -,-,-, 645618 LINE CR1 585 chrUn_NT_466809v1 10774 11469 CR1-B2 698 - 10774 11469 0 2 467,225, 0,470, -,-, 645625 LINE CR1 585 chrUn_NT_466810v1 2871 7585 GGXHOI 408 + 2871 7585 0 2 3257,1430, 0,3284, +,+, 645633 Satellite W-chromosome 585 chrUn_NT_466810v1 8298 9732 GGXHOI 438 + 8298 9732 0 2 527,860, 0,574, +,+, 645636 Satellite W-chromosome 585 chrUn_NT_466810v1 11923 14018 GGXHOI 357 + 11923 14018 0 2 724,1357, 0,738, +,+, 645640 Satellite W-chromosome 585 chrUn_NT_466811v1 2248 5677 GGXHOI 366 - 2248 5677 0 3 559,1797,1037, 0,577,2392, -,-,-, 645645 Satellite W-chromosome 585 chrUn_NT_466811v1 5884 9298 GGXHOI 366 - 5884 9298 0 4 554,1030,711,1048, 0,572,1637,2366, -,-,-,-, 645646 Satellite W-chromosome 585 chrUn_NT_466811v1 9480 12670 GGXHOI 371 - 9480 12670 0 3 560,1790,804, 0,578,2386, -,-,-, 645647 Satellite W-chromosome 585 chrUn_NT_466812v1 11942 12086 (GGACCAAAAT)n 818 + 11942 12086 0 2 50,53, 0,91, +,+, 645666 Simple_repeat Simple_repeat 585 chrUn_NT_466813v1 3192 3417 (GCCCCACAGCT)n 410 - 3192 3417 0 2 85,98, 0,127, -,-, 645675 Satellite Satellite 585 chrUn_NT_466814v1 622 1093 (CAAGG)n 626 + 622 1093 0 2 200,98, 0,373, +,+, 645685 Simple_repeat Simple_repeat 585 chrUn_NT_466814v1 1113 2155 CR1-F0 878 + 1113 2155 0 2 607,435, 0,607, +,+, 645687 LINE CR1 585 chrUn_NT_466815v1 3314 4109 GGXHOI 404 - 3314 4109 0 2 275,499, 0,296, -,-, 645705 Satellite W-chromosome 585 chrUn_NT_466815v1 4861 6119 GGXHOI 388 - 4861 6119 0 2 424,819, 0,439, -,-, 645708 Satellite W-chromosome 585 chrUn_NT_466815v1 6152 7293 GGXHOI 403 - 6152 7293 0 2 696,426, 0,715, -,-, 645710 Satellite W-chromosome 585 chrUn_NT_466815v1 9130 9953 GGXHOI 405 - 9130 9953 0 2 308,494, 0,329, -,-, 645716 Satellite W-chromosome 585 chrUn_NT_466815v1 9987 11952 GGXHOI 399 - 9987 11952 0 4 691,422,307,488, 0,710,1149,1477, -,-,-,-, 645718 Satellite W-chromosome 585 chrUn_NT_466815v1 12691 13831 GGXHOI 366 - 12691 13831 0 3 422,275,375, 0,469,765, -,-,-, 645721 Satellite W-chromosome 585 chrUn_NT_466817v1 5937 6561 CR1-H 681 - 5937 6561 0 2 139,479, 0,145, -,-, 645734 LINE CR1 585 chrUn_NT_466817v1 9109 9569 CR1-H 660 - 9109 9569 0 2 163,297, 0,163, -,-, 645738 LINE CR1 585 chrUn_NT_466818v1 6132 6291 (AACGGAAAG)n 937 + 6132 6291 0 2 66,39, 0,120, +,+, 645755 Simple_repeat Simple_repeat 585 chrUn_NT_466818v1 7123 7294 (AACAACGGA)n 1000 + 7123 7294 0 2 51,69, 0,102, +,+, 645762 Simple_repeat Simple_repeat 585 chrUn_NT_466818v1 10155 10314 (AACGGAAAG)n 937 + 10155 10314 0 2 66,39, 0,120, +,+, 645773 Simple_repeat Simple_repeat 585 chrUn_NT_466818v1 11146 11317 (AACAACGGA)n 1000 + 11146 11317 0 2 51,69, 0,102, +,+, 645779 Simple_repeat Simple_repeat 585 chrUn_NT_466818v1 12329 12488 (AACGGAAAG)n 937 + 12329 12488 0 2 66,39, 0,120, +,+, 645782 Simple_repeat Simple_repeat 585 chrUn_NT_466818v1 13040 13211 (AACAACGGA)n 1000 + 13040 13211 0 2 51,69, 0,102, +,+, 645787 Simple_repeat Simple_repeat 585 chrUn_NT_466819v1 11450 12289 CR1-F0 740 - 11450 12289 0 2 119,720, 0,119, -,-, 645806 LINE CR1 585 chrUn_NT_466819v1 12865 13601 (CCTTG)n 561 + 12865 13601 0 3 322,44,189, 0,503,547, +,+,+, 645809 Simple_repeat Simple_repeat 585 chrUn_NT_466819v1 13601 14308 (GCCTG)n 515 + 13601 14308 0 3 181,76,197, 0,434,510, +,+,+, 645811 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 304 1641 (CGAGG)n 486 + 304 1641 0 4 273,289,215,342, 0,295,761,995, +,+,+,+, 645817 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 1657 2179 (GAGGC)n 318 + 1657 2179 0 2 57,411, 0,111, +,+, 645819 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 2183 2885 (CGAGG)n 518 + 2183 2885 0 3 242,12,87, 0,422,615, +,+,+, 645821 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 3118 3920 (CGAGG)n 528 + 3118 3920 0 3 96,233,286, 0,283,516, +,+,+, 645826 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 5475 6173 (CGAGG)n 541 + 5475 6173 0 2 473,178, 0,520, +,+, 645837 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 7042 7598 (CGAGG)n 528 + 7042 7598 0 2 342,178, 0,378, +,+, 645843 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 7691 9584 (CGAGG)n 542 + 7691 9584 0 6 443,143,206,182,439,238, 0,629,790,1014,1216,1655, +,+,+,+,+,+, 645845 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 9619 10793 (CGAGG)n 588 + 9619 10793 0 3 562,213,375, 0,562,799, +,+,+, 645848 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 11199 11853 (CGAGG)n 579 + 11199 11853 0 3 201,264,176, 0,201,478, +,+,+, 645852 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 12153 12940 (CGAGG)n 571 + 12153 12940 0 3 245,106,218, 0,280,569, +,+,+, 645854 Simple_repeat Simple_repeat 585 chrUn_NT_466820v1 13662 14122 (CGAGG)n 591 + 13662 14122 0 2 208,218, 0,242, +,+, 645861 Simple_repeat Simple_repeat 585 chrUn_NT_466821v1 1214 2834 GGXHOI 375 - 1214 2834 0 2 1086,472, 0,1148, -,-, 645865 Satellite W-chromosome 585 chrUn_NT_466821v1 4148 4988 GGXHOI 369 - 4148 4988 0 2 305,472, 0,368, -,-, 645868 Satellite W-chromosome 585 chrUn_NT_466821v1 5594 6426 GGXHOI 372 - 5594 6426 0 2 549,266, 0,566, -,-, 645870 Satellite W-chromosome 585 chrUn_NT_466821v1 11557 12416 GGXHOI 333 - 11557 12416 0 2 386,457, 0,402, -,-, 645876 Satellite W-chromosome 585 chrUn_NT_466821v1 13725 14350 (CCTTG)n 523 + 13725 14350 0 2 225,374, 0,251, +,+, 645881 Simple_repeat Simple_repeat 585 chrUn_NT_466824v1 800 10177 GGXHOI 414 + 800 10177 0 10 178,509,3612,146,517,468,1007,519,2011,222, 0,198,722,4348,4516,5048,5535,6564,7098,9155, +,+,+,+,+,+,+,+,+,+, 645893 Satellite W-chromosome 585 chrUn_NT_466824v1 11176 12639 GGXHOI 287 + 11176 12639 0 3 365,370,666, 0,410,797, +,+,+, 645896 Satellite W-chromosome 585 chrUn_NT_466824v1 12776 13659 GGXHOI 432 + 12776 13659 0 2 723,142, 0,741, +,+, 645897 Satellite W-chromosome 585 chrUn_NT_466826v1 3294 4412 CR1-B2 690 - 3294 4412 0 2 891,224, 0,894, -,-, 645904 LINE CR1 585 chrUn_NT_466826v1 10420 11533 CR1-B2 666 - 10420 11533 0 2 885,225, 0,888, -,-, 645912 LINE CR1 585 chrUn_NT_466827v1 909 1033 CR1-Y4 600 + 909 1033 0 2 64,60, 0,64, +,+, 645914 LINE CR1 585 chrUn_NT_466827v1 1361 1734 CR1-Y4 546 + 1361 1734 0 5 65,64,61,65,64, 0,83,147,226,309, +,+,+,+,+, 645917 LINE CR1 585 chrUn_NT_466827v1 8187 8269 (CCCCT)n 404 + 8187 8269 0 2 6,10, 0,72, +,+, 645933 Simple_repeat Simple_repeat 585 chrUn_NT_466829v1 4402 4888 CR1-X 481 + 4402 4888 0 3 98,132,214, 0,98,272, +,+,+, 645951 LINE CR1 585 chrUn_NT_466830v1 906 3119 GGXHOI 379 + 906 3119 0 2 420,1730, 0,483, +,+, 645959 Satellite W-chromosome 585 chrUn_NT_466830v1 3231 8057 GGXHOI 357 + 3231 8057 0 2 3577,1202, 0,3624, +,+, 645960 Satellite W-chromosome 585 chrUn_NT_466830v1 8240 9788 GGXHOI 392 + 8240 9788 0 3 648,503,366, 0,664,1182, +,+,+, 645961 Satellite W-chromosome 585 chrUn_NT_466832v1 1019 9876 GGXHOI 406 + 1019 9876 0 5 1955,3011,1750,1752,180, 0,1978,5051,6863,8677, +,+,+,+,+, 645984 Satellite W-chromosome 585 chrUn_NT_466832v1 10158 13318 GGXHOI 367 + 10158 13318 0 3 1484,594,1010, 0,1536,2150, +,+,+, 645985 Satellite W-chromosome 585 chrUn_NT_466834v1 12891 12968 (TCC)n 450 + 12891 12968 0 2 18,40, 0,37, +,+, 646034 Simple_repeat Simple_repeat 585 chrUn_NT_466836v1 7719 8341 CR1-H 673 - 7719 8341 0 2 139,477, 0,145, -,-, 646057 LINE CR1 585 chrUn_NT_466836v1 10853 12207 CR1-H 653 - 10853 12207 0 2 117,1237, 0,117, -,-, 646062 LINE CR1 585 chrUn_NT_466837v1 870 1729 GGXHOI 370 + 870 1729 0 2 148,697, 0,162, +,+, 646066 Satellite W-chromosome 585 chrUn_NT_466837v1 3210 14333 GGXHOI 405 + 3210 14333 0 14 1446,1061,672,2485,261,991,465,64,600,296,469,261,1410,414, 0,1465,2541,3236,5737,6010,7024,7506,7582,8203,8522,9007,9280,10709, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 646069 Satellite W-chromosome 585 chrUn_NT_466838v1 8901 12591 CR1-H 616 - 8901 12591 0 4 138,479,118,1152, 0,144,2420,2538, -,-,-,-, 646076 LINE CR1 585 chrUn_NT_466839v1 1651 8448 GGXHOI 427 - 1651 8448 0 5 905,1327,2800,235,1468, 0,921,2264,5080,5329, -,-,-,-,-, 646080 Satellite W-chromosome 585 chrUn_NT_466839v1 8466 12535 ENS1-LTR 729 + 8466 12535 0 3 921,2598,472, 0,921,3597, +,+,+, 646081 LTR ERVL 585 chrUn_NT_466839v1 12785 13920 GGXHOI 345 - 12785 13920 0 4 120,340,165,381, 0,153,548,754, -,-,-,-, 646082 Satellite W-chromosome 585 chrUn_NT_466840v1 12014 14300 GGXHOI 506 - 12014 14300 0 4 354,363,65,1455, 0,371,745,831, -,-,-,-, 646087 Satellite W-chromosome 585 chrUn_NT_466842v1 647 2124 GGXHOI 434 + 647 2124 0 3 799,148,496, 0,813,981, +,+,+, 646106 Satellite W-chromosome 585 chrUn_NT_466842v1 2266 4312 GGXHOI 415 + 2266 4312 0 3 350,1134,522, 0,370,1524, +,+,+, 646108 Satellite W-chromosome 585 chrUn_NT_466842v1 4448 5399 GGXHOI 371 + 4448 5399 0 2 326,611, 0,340, +,+, 646109 Satellite W-chromosome 585 chrUn_NT_466842v1 5559 11027 GGXHOI 410 + 5559 11027 0 5 317,1142,1142,1060,1727, 0,337,1499,2661,3741, +,+,+,+,+, 646110 Satellite W-chromosome 585 chrUn_NT_466842v1 11240 13326 GGXHOI 402 + 11240 13326 0 4 412,701,354,523, 0,432,1189,1563, +,+,+,+, 646111 Satellite W-chromosome 585 chrUn_NT_466842v1 13479 13957 GGXHOI 417 + 13479 13957 0 2 317,146, 0,332, +,+, 646112 Satellite W-chromosome 585 chrUn_NT_466843v1 8983 9486 (CTCTATGGGG)n 284 + 8983 9486 0 4 110,121,107,107, 0,124,276,396, +,+,+,+, 646119 Satellite Satellite 585 chrUn_NT_466843v1 10051 10276 (CTCTATGGGG)n 310 + 10051 10276 0 2 92,15, 0,210, +,+, 646123 Satellite Satellite 585 chrUn_NT_466843v1 10649 11152 (CTCTATGGGG)n 288 + 10649 11152 0 4 110,121,107,107, 0,124,276,396, +,+,+,+, 646127 Satellite Satellite 585 chrUn_NT_466843v1 11717 11942 (CTCTATGGGG)n 310 + 11717 11942 0 2 92,15, 0,210, +,+, 646131 Satellite Satellite 585 chrUn_NT_466843v1 12315 12561 (CTCTATGGGG)n 285 + 12315 12561 0 2 111,121, 0,125, +,+, 646134 Satellite Satellite 585 chrUn_NT_466844v1 11191 14071 Char12Mar1_GG 436 - 11191 14071 0 2 959,253, 0,2627, -,-, 646147 DNA hAT-Charlie 585 chrUn_NT_466845v1 3370 3668 GGLTR3E1 719 - 3370 3668 0 2 138,160, 0,138, -,-, 646153 LTR ERVL 585 chrUn_NT_466846v1 7592 7870 CR1-X1 380 + 7592 7870 0 2 63,215, 0,63, +,+, 646166 LINE CR1 585 chrUn_NT_466847v1 2253 4691 GGXHOI 375 - 2253 4691 0 8 255,235,346,83,371,161,244,597, 0,271,520,880,985,1373,1553,1841, -,-,-,-,-,-,-,-, 646172 Satellite W-chromosome 585 chrUn_NT_466847v1 4841 9184 GGXHOI 361 - 4841 9184 0 8 297,503,124,143,139,541,2160,256, 0,313,830,993,1149,1338,1895,4087, -,-,-,-,-,-,-,-, 646173 Satellite W-chromosome 585 chrUn_NT_466847v1 9252 10453 GGXHOI 372 - 9252 10453 0 4 350,133,138,463, 0,402,580,738, -,-,-,-, 646174 Satellite W-chromosome 585 chrUn_NT_466847v1 10811 11252 GGXHOI 316 - 10811 11252 0 3 121,162,134, 0,133,307, -,-,-, 646175 Satellite W-chromosome 585 chrUn_NT_466847v1 11329 14296 GGXHOI 370 - 11329 14296 0 5 199,1174,1077,294,136, 0,211,1399,2523,2831, -,-,-,-,-, 646176 Satellite W-chromosome 585 chrUn_NT_466848v1 8242 8372 GA-rich 328 + 8242 8372 0 2 43,38, 0,92, +,+, 646202 Low_complexity Low_complexity 585 chrUn_NT_466848v1 12859 12991 GA-rich 342 + 12859 12991 0 2 42,33, 0,99, +,+, 646219 Low_complexity Low_complexity 585 chrUn_NT_466851v1 7829 13724 GGXHOI 359 - 7829 13724 0 6 690,2175,140,1050,906,786, 0,748,2946,3103,4164,5109, -,-,-,-,-,-, 646271 Satellite W-chromosome 585 chrUn_NT_466851v1 13893 14302 GGXHOI 396 - 13893 14302 0 2 333,65, 0,344, -,-, 646272 Satellite W-chromosome 585 chrUn_NT_466852v1 3407 11805 GGXHOI 476 + 3407 11805 0 12 639,804,466,145,356,266,2130,892,370,766,252,1092, 0,659,1485,1972,2139,2511,2799,4949,5866,6251,7035,7306, +,+,+,+,+,+,+,+,+,+,+,+, 646275 Satellite W-chromosome 585 chrUn_NT_466852v1 12492 13628 GGXHOI 397 + 12492 13628 0 2 673,443, 0,693, +,+, 646277 Satellite W-chromosome 585 chrUn_NT_466852v1 13736 14300 GGXHOI 436 + 13736 14300 0 2 357,159, 0,405, +,+, 646278 Satellite W-chromosome 585 chrUn_NT_466854v1 3502 7602 GGXHOI 359 - 3502 7602 0 6 159,1614,526,922,373,395, 0,188,1818,2379,3319,3705, -,-,-,-,-,-, 646281 Satellite W-chromosome 585 chrUn_NT_466854v1 7775 9512 GGXHOI 377 - 7775 9512 0 3 747,633,292, 0,795,1445, -,-,-, 646282 Satellite W-chromosome 585 chrUn_NT_466854v1 10414 11130 GGXHOI 389 - 10414 11130 0 2 104,596, 0,120, -,-, 646285 Satellite W-chromosome 585 chrUn_NT_466854v1 11199 12952 GGXHOI 369 - 11199 12952 0 3 361,459,860, 0,377,893, -,-,-, 646286 Satellite W-chromosome 585 chrUn_NT_466854v1 13142 14303 GGXHOI 374 - 13142 14303 0 2 814,331, 0,830, -,-, 646287 Satellite W-chromosome 585 chrUn_NT_466856v1 604 2158 GGXHOI 399 - 604 2158 0 4 287,347,534,306, 0,307,673,1248, -,-,-,-, 646303 Satellite W-chromosome 585 chrUn_NT_466856v1 3974 4706 GGXHOI 367 - 3974 4706 0 2 485,228, 0,504, -,-, 646307 Satellite W-chromosome 585 chrUn_NT_466856v1 8063 9396 GGXHOI 370 - 8063 9396 0 4 316,257,232,413, 0,374,646,920, -,-,-,-, 646313 Satellite W-chromosome 585 chrUn_NT_466856v1 10262 11178 GGXHOI 413 - 10262 11178 0 2 470,401, 0,515, -,-, 646315 Satellite W-chromosome 585 chrUn_NT_466856v1 12182 13591 GGXHOI 404 - 12182 13591 0 3 258,574,516, 0,274,893, -,-,-, 646317 Satellite W-chromosome 585 chrUn_NT_466857v1 1038 2434 GGXHOI 387 - 1038 2434 0 4 250,232,323,485, 0,265,536,911, -,-,-,-, 646320 Satellite W-chromosome 585 chrUn_NT_466857v1 2546 3491 GGXHOI 373 - 2546 3491 0 4 336,56,192,223, 0,389,503,722, -,-,-,-, 646321 Satellite W-chromosome 585 chrUn_NT_466857v1 3566 6507 GGXHOI 387 - 3566 6507 0 5 613,539,966,595,135, 0,654,1209,2189,2806, -,-,-,-,-, 646322 Satellite W-chromosome 585 chrUn_NT_466857v1 7294 8420 GGXHOI 414 - 7294 8420 0 3 705,108,253, 0,744,873, -,-,-, 646324 Satellite W-chromosome 585 chrUn_NT_466857v1 8547 9031 GGXHOI 267 - 8547 9031 0 2 298,135, 0,349, -,-, 646325 Satellite W-chromosome 585 chrUn_NT_466859v1 7937 8226 GA-rich 399 + 7937 8226 0 2 228,28, 0,261, +,+, 646345 Low_complexity Low_complexity 585 chrUn_NT_466860v1 5543 6357 (ACCCCATAGGG)n 207 + 5543 6357 0 3 135,262,373, 0,155,441, +,+,+, 646355 Satellite Satellite 585 chrUn_NT_466860v1 12452 12562 G-rich 621 + 12452 12562 0 2 30,31, 0,79, +,+, 646359 Low_complexity Low_complexity 585 chrUn_NT_466860v1 13719 14115 (ACCCCATAGGG)n 550 - 13719 14115 0 2 210,62, 0,334, -,-, 646361 Satellite Satellite 585 chrUn_NT_466861v1 5316 6316 GGERVL-A-int 664 + 5316 6316 0 2 185,719, 0,281, +,+, 646367 LTR ERVL 585 chrUn_NT_466862v1 10536 10683 G-rich 606 + 10536 10683 0 2 37,57, 0,90, +,+, 646380 Low_complexity Low_complexity 585 chrUn_NT_466862v1 12634 13463 GGLTR7-int 721 - 12634 13463 0 3 609,72,145, 0,612,684, -,-,-, 646382 LTR ERV1 585 chrUn_NT_466863v1 214 962 (CAGGC)n 526 + 214 962 0 3 238,43,108, 0,421,640, +,+,+, 646385 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 1466 2015 (CAAGG)n 468 + 1466 2015 0 2 216,149, 0,400, +,+, 646392 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 2036 2598 (CAAGG)n 523 + 2036 2598 0 2 210,331, 0,231, +,+, 646395 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 2835 3236 (CAAGG)n 544 + 2835 3236 0 2 148,49, 0,352, +,+, 646397 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 4190 4752 (CAAGG)n 523 + 4190 4752 0 2 210,331, 0,231, +,+, 646407 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 4992 5391 (CAAGG)n 560 + 4992 5391 0 2 178,22, 0,377, +,+, 646409 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 6345 6907 (CAAGG)n 528 + 6345 6907 0 2 178,380, 0,182, +,+, 646416 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 7145 7546 (CAAGG)n 554 + 7145 7546 0 2 148,49, 0,352, +,+, 646418 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 8481 9043 (CAAGG)n 523 + 8481 9043 0 2 210,331, 0,231, +,+, 646425 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 9283 9682 (CAAGG)n 546 + 9283 9682 0 2 178,22, 0,377, +,+, 646427 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 10629 11191 (CAAGG)n 523 + 10629 11191 0 2 210,331, 0,231, +,+, 646434 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 11091 11960 (CAGGC)n 516 + 11091 11960 0 2 340,131, 0,738, +,+, 646435 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 11431 11829 (CAAGG)n 536 + 11431 11829 0 2 179,32, 0,366, +,+, 646436 Simple_repeat Simple_repeat 585 chrUn_NT_466863v1 12682 13356 (CAGGC)n 498 + 12682 13356 0 2 128,214, 0,460, +,+, 646443 Simple_repeat Simple_repeat 585 chrUn_NT_466864v1 2937 3003 (C)n 869 + 2937 3003 0 2 25,17, 0,49, +,+, 646452 Simple_repeat Simple_repeat 585 chrUn_NT_466865v1 10321 12385 CR1-F 521 - 10321 12385 0 6 204,201,155,204,203,203, 0,457,948,1370,1616,1861, -,-,-,-,-,-, 646477 LINE CR1 585 chrUn_NT_466865v1 12428 14267 CR1-F 507 - 12428 14267 0 6 212,200,155,204,203,182, 0,257,747,1167,1413,1657, -,-,-,-,-,-, 646481 LINE CR1 585 chrUn_NT_466867v1 3028 3558 GGLTR3F1 911 - 3028 3558 0 2 494,36, 0,494, -,-, 646504 LTR ERVL 585 chrUn_NT_466867v1 3558 14269 GGERVL-B-int 826 - 3558 14269 0 4 5317,494,3580,1307, 0,5318,5812,9404, -,-,-,-, 646505 LTR ERVL 585 chrUn_NT_466868v1 453 10651 GGXHOI 423 + 453 10651 0 11 412,1057,146,1059,1145,1056,1143,1143,1143,1143,563, 0,432,1504,1663,2742,3907,4983,6146,7309,8472,9635, +,+,+,+,+,+,+,+,+,+,+, 646507 Satellite W-chromosome 585 chrUn_NT_466868v1 10755 14230 GGXHOI 396 + 10755 14230 0 4 413,1143,1142,717, 0,433,1596,2758, +,+,+,+, 646508 Satellite W-chromosome 585 chrUn_NT_466873v1 8629 9746 CR1-F 678 + 8629 9746 0 2 335,282, 0,835, +,+, 646556 LINE CR1 585 chrUn_NT_466873v1 11783 12085 GGLTR3E1 631 - 11783 12085 0 2 141,161, 0,141, -,-, 646559 LTR ERVL 585 chrUn_NT_466874v1 5974 6537 (CGAGG)n 540 + 5974 6537 0 2 366,172, 0,391, +,+, 646566 Simple_repeat Simple_repeat 585 chrUn_NT_466874v1 6575 7210 (CGAGG)n 480 + 6575 7210 0 2 178,444, 0,191, +,+, 646568 Simple_repeat Simple_repeat 585 chrUn_NT_466874v1 8126 8740 (CGAGG)n 472 + 8126 8740 0 3 202,173,175, 0,225,439, +,+,+, 646574 Simple_repeat Simple_repeat 585 chrUn_NT_466874v1 9552 10493 (CGAGG)n 490 + 9552 10493 0 2 596,316, 0,625, +,+, 646578 Simple_repeat Simple_repeat 585 chrUn_NT_466874v1 12606 13013 (CGAGG)n 539 + 12606 13013 0 2 175,176, 0,231, +,+, 646586 Simple_repeat Simple_repeat 585 chrUn_NT_466875v1 10739 11838 GGXHOI 422 - 10739 11838 0 2 768,277, 0,822, -,-, 646589 Satellite W-chromosome 585 chrUn_NT_466875v1 11910 13915 GGXHOI 423 - 11910 13915 0 5 276,391,618,393,239, 0,323,726,1356,1766, -,-,-,-,-, 646590 Satellite W-chromosome 585 chrUn_NT_466876v1 2655 3275 GGXHOI 474 - 2655 3275 0 2 74,205, 0,415, -,-, 646598 Satellite W-chromosome 585 chrUn_NT_466876v1 3363 5459 GGXHOI 485 - 3363 5459 0 3 693,823,142, 0,730,1954, -,-,-, 646600 Satellite W-chromosome 585 chrUn_NT_466876v1 6721 7825 GGXHOI 510 - 6721 7825 0 4 216,257,18,216, 0,259,528,888, -,-,-,-, 646605 Satellite W-chromosome 585 chrUn_NT_466876v1 7909 8766 GGXHOI 476 - 7909 8766 0 2 42,539, 0,318, -,-, 646607 Satellite W-chromosome 585 chrUn_NT_466876v1 9062 10110 GGXHOI 466 - 9062 10110 0 2 122,911, 0,137, -,-, 646611 Satellite W-chromosome 585 chrUn_NT_466876v1 10177 11225 GGXHOI 462 - 10177 11225 0 3 42,256,225, 0,307,823, -,-,-, 646612 Satellite W-chromosome 585 chrUn_NT_466876v1 12724 14251 GGXHOI 556 - 12724 14251 0 3 20,811,31, 0,413,1496, -,-,-, 646617 Satellite W-chromosome 585 chrUn_NT_466877v1 2601 3225 CR1-H 378 + 2601 3225 0 2 209,379, 0,245, +,+, 646624 LINE CR1 585 chrUn_NT_466877v1 5105 5729 CR1-H 378 + 5105 5729 0 2 209,379, 0,245, +,+, 646627 LINE CR1 585 chrUn_NT_466877v1 7610 8234 CR1-H 378 + 7610 8234 0 2 209,379, 0,245, +,+, 646630 LINE CR1 585 chrUn_NT_466877v1 10115 10739 CR1-H 378 + 10115 10739 0 2 209,379, 0,245, +,+, 646633 LINE CR1 585 chrUn_NT_466877v1 12620 13242 CR1-H 375 + 12620 13242 0 2 209,377, 0,245, +,+, 646636 LINE CR1 585 chrUn_NT_466879v1 5038 5224 (CCACT)n 469 + 5038 5224 0 2 54,101, 0,85, +,+, 646666 Simple_repeat Simple_repeat 585 chrUn_NT_466881v1 3059 3605 CR1-X 429 - 3059 3605 0 3 215,131,138, 0,250,408, -,-,-, 646724 LINE CR1 585 chrUn_NT_466881v1 8414 9553 CR1-B2 672 - 8414 9553 0 2 913,223, 0,916, -,-, 646731 LINE CR1 585 chrUn_NT_466883v1 5026 8895 GGXHOI 361 - 5026 8895 0 4 576,1173,422,1601, 0,597,1790,2268, -,-,-,-, 646738 Satellite W-chromosome 585 chrUn_NT_466883v1 10647 12353 (CCTTG)n 598 + 10647 12353 0 3 191,485,678, 0,543,1028, +,+,+, 646745 Simple_repeat Simple_repeat 585 chrUn_NT_466883v1 11830 12491 (GCCTG)n 492 + 11830 12491 0 2 137,346, 0,315, +,+, 646747 Simple_repeat Simple_repeat 585 chrUn_NT_466883v1 12365 12941 (CCTTG)n 626 + 12365 12941 0 3 178,206,192, 0,178,384, +,+,+, 646749 Simple_repeat Simple_repeat 585 chrUn_NT_466884v1 5636 6127 GGLTR3F1 732 + 5636 6127 0 2 232,210, 0,281, +,+, 646760 LTR ERVL 585 chrUn_NT_466885v1 1224 2275 GGXHOI 392 + 1224 2275 0 2 472,516, 0,535, +,+, 646770 Satellite W-chromosome 585 chrUn_NT_466885v1 2907 3283 GGXHOI 383 + 2907 3283 0 2 135,226, 0,150, +,+, 646772 Satellite W-chromosome 585 chrUn_NT_466885v1 11963 13398 GGXHOI 376 + 11963 13398 0 2 382,992, 0,443, +,+, 646786 Satellite W-chromosome 585 chrUn_NT_466886v1 461 1309 (CAGGC)n 465 + 461 1309 0 3 193,212,443, 0,193,405, +,+,+, 646792 Simple_repeat Simple_repeat 585 chrUn_NT_466886v1 1085 1859 (CAAGG)n 558 + 1085 1859 0 3 343,191,240, 0,343,534, +,+,+, 646793 Simple_repeat Simple_repeat 585 chrUn_NT_466886v1 13635 14224 GGERV10_LTR 970 + 13635 14224 0 2 225,363, 0,226, +,+, 646811 LTR ERVL 585 chrUn_NT_466887v1 3363 3606 G-rich 274 + 3363 3606 0 2 30,43, 0,200, +,+, 646816 Low_complexity Low_complexity 585 chrUn_NT_466889v1 6040 7469 GGXHOI 434 - 6040 7469 0 2 822,565, 0,864, -,-, 646845 Satellite W-chromosome 585 chrUn_NT_466889v1 7784 11872 GGXHOI 416 - 7784 11872 0 4 859,781,642,1675, 0,916,1756,2413, -,-,-,-, 646847 Satellite W-chromosome 585 chrUn_NT_466889v1 11987 14221 GGXHOI 347 - 11987 14221 0 2 1782,437, 0,1797, -,-, 646848 Satellite W-chromosome 585 chrUn_NT_466890v1 1478 1906 GGXHOI 285 - 1478 1906 0 2 256,140, 0,288, -,-, 646850 Satellite W-chromosome 585 chrUn_NT_466890v1 1995 3868 GGXHOI 413 - 1995 3868 0 3 899,651,249, 0,931,1624, -,-,-, 646851 Satellite W-chromosome 585 chrUn_NT_466890v1 3981 6684 GGXHOI 435 - 3981 6684 0 2 874,1806, 0,897, -,-, 646852 Satellite W-chromosome 585 chrUn_NT_466890v1 6838 9982 GGXHOI 394 - 6838 9982 0 4 470,2159,232,185, 0,529,2711,2959, -,-,-,-, 646853 Satellite W-chromosome 585 chrUn_NT_466890v1 10132 14176 GGXHOI 367 - 10132 14176 0 3 1101,196,2715, 0,1114,1329, -,-,-, 646854 Satellite W-chromosome 585 chrUn_NT_466891v1 4614 5984 GGXHOI 279 - 4614 5984 0 4 371,181,576,146, 0,401,637,1224, -,-,-,-, 646856 Satellite W-chromosome 585 chrUn_NT_466891v1 6270 7510 GGXHOI 322 - 6270 7510 0 2 428,800, 0,440, -,-, 646857 Satellite W-chromosome 585 chrUn_NT_466891v1 7634 8783 GGXHOI 390 - 7634 8783 0 2 228,903, 0,246, -,-, 646858 Satellite W-chromosome 585 chrUn_NT_466891v1 11741 12621 GGXHOI 352 - 11741 12621 0 2 677,182, 0,698, -,-, 646864 Satellite W-chromosome 585 chrUn_NT_466891v1 12993 14214 GGXHOI 377 - 12993 14214 0 2 214,991, 0,230, -,-, 646866 Satellite W-chromosome 585 chrUn_NT_466892v1 4564 5495 GGXHOI 340 + 4564 5495 0 2 283,632, 0,299, +,+, 646875 Satellite W-chromosome 585 chrUn_NT_466892v1 9377 10428 GGXHOI 392 + 9377 10428 0 2 472,516, 0,535, +,+, 646880 Satellite W-chromosome 585 chrUn_NT_466892v1 10527 11619 GGXHOI 386 + 10527 11619 0 2 472,557, 0,535, +,+, 646881 Satellite W-chromosome 585 chrUn_NT_466892v1 12630 13954 GGXHOI 334 + 12630 13954 0 2 958,305, 0,1019, +,+, 646883 Satellite W-chromosome 585 chrUn_NT_466893v1 2964 3371 CR1-H 683 + 2964 3371 0 2 102,305, 0,102, +,+, 646887 LINE CR1 585 chrUn_NT_466894v1 420 987 CR1-C 563 - 420 987 0 2 386,181, 0,386, -,-, 646895 LINE CR1 585 chrUn_NT_466894v1 1889 5803 CR1-C 592 - 1889 5803 0 5 39,470,294,397,186, 0,255,1187,3331,3728, -,-,-,-,-, 646900 LINE CR1 585 chrUn_NT_466894v1 6754 10636 CR1-C2 658 - 6754 10636 0 5 220,468,294,399,187, 0,220,1149,3296,3695, -,-,-,-,-, 646908 LINE CR1 585 chrUn_NT_466894v1 11587 13022 CR1-C2 652 - 11587 13022 0 3 220,466,288, 0,220,1147, -,-,-, 646915 LINE CR1 585 chrUn_NT_466895v1 4924 6025 CR1-H 707 + 4924 6025 0 4 132,155,416,113, 0,385,572,988, +,+,+,+, 646923 LINE CR1 585 chrUn_NT_466895v1 7842 8461 CR1-H 665 + 7842 8461 0 2 476,137, 0,482, +,+, 646926 LINE CR1 585 chrUn_NT_466896v1 1388 1918 Sat-CR1_GG 168 - 1388 1918 0 2 123,164, 0,366, -,-, 646935 Satellite Satellite 585 chrUn_NT_466896v1 2555 3456 Sat-CR1_GG 214 + 2555 3456 0 2 164,476, 0,425, +,+, 646940 Satellite Satellite 585 chrUn_NT_466896v1 4258 4789 Sat-CR1_GG 172 - 4258 4789 0 2 124,164, 0,367, -,-, 646944 Satellite Satellite 585 chrUn_NT_466896v1 5424 5955 Sat-CR1_GG 174 + 5424 5955 0 2 164,106, 0,425, +,+, 646949 Satellite Satellite 585 chrUn_NT_466896v1 6757 7658 Sat-CR1_GG 204 - 6757 7658 0 2 494,164, 0,737, -,-, 646953 Satellite Satellite 585 chrUn_NT_466896v1 8294 8825 Sat-CR1_GG 174 + 8294 8825 0 2 164,106, 0,425, +,+, 646958 Satellite Satellite 585 chrUn_NT_466896v1 12746 13316 Sat-CR1_GG 188 - 12746 13316 0 2 160,164, 0,406, -,-, 646969 Satellite Satellite 585 chrUn_NT_466897v1 2587 3631 CR1-F0 883 - 2587 3631 0 2 437,607, 0,437, -,-, 646979 LINE CR1 585 chrUn_NT_466897v1 8091 10928 GGERVL-B-int 714 + 8091 10928 0 2 1927,910, 0,1927, +,+, 646992 LTR ERVL 585 chrUn_NT_466897v1 11663 13057 GGLTR7-int 305 + 11663 13057 0 3 100,289,280, 0,126,1114, +,+,+, 646994 LTR ERV1 585 chrUn_NT_466898v1 8740 8834 (TCCCACC)n 322 + 8740 8834 0 2 42,16, 0,78, +,+, 647000 Simple_repeat Simple_repeat 585 chrUn_NT_466899v1 1977 2824 GGLTR7-int 765 - 1977 2824 0 3 355,258,212, 0,355,635, -,-,-, 647007 LTR ERV1 585 chrUn_NT_466899v1 3062 7246 GGERV28_I-int 167 - 3062 7246 0 4 1994,384,619,130, 0,2302,2968,4054, -,-,-,-, 647008 LTR ERVK 585 chrUn_NT_466899v1 10465 10953 CR1-Y4 627 + 10465 10953 0 2 195,288, 0,200, +,+, 647012 LINE CR1 585 chrUn_NT_466900v1 5957 6279 GGERV10_LTR 559 - 5957 6279 0 2 157,71, 0,251, -,-, 647018 LTR ERVL 585 chrUn_NT_466900v1 7224 8150 TguLTR5e 304 + 7224 8150 0 2 93,167, 0,759, +,+, 647020 LTR ERVL 585 chrUn_NT_466901v1 6608 11887 GGXHOI 558 - 6608 11887 0 2 274,669, 0,4610, -,-, 647026 Satellite W-chromosome 585 chrUn_NT_466901v1 11916 14176 GGXHOI 550 - 11916 14176 0 2 853,687, 0,1573, -,-, 647029 Satellite W-chromosome 585 chrUn_NT_466902v1 1083 12782 GGXHOI 432 + 1083 12782 0 13 1046,813,515,1478,1002,639,1183,1061,519,1548,518,470,640, 0,1062,1897,2431,3931,4962,5630,6842,7925,8459,10028,10561,11059, +,+,+,+,+,+,+,+,+,+,+,+,+, 647033 Satellite W-chromosome 585 chrUn_NT_466902v1 12857 14188 GGXHOI 341 + 12857 14188 0 4 186,377,527,116, 0,247,659,1215, +,+,+,+, 647034 Satellite W-chromosome 585 chrUn_NT_466903v1 929 3305 GGXHOI 405 - 929 3305 0 3 367,894,1065, 0,397,1311, -,-,-, 647036 Satellite W-chromosome 585 chrUn_NT_466903v1 4027 4519 GGXHOI 357 - 4027 4519 0 2 219,237, 0,255, -,-, 647039 Satellite W-chromosome 585 chrUn_NT_466903v1 5894 7140 GGXHOI 393 - 5894 7140 0 2 561,636, 0,610, -,-, 647043 Satellite W-chromosome 585 chrUn_NT_466903v1 11355 13832 GGXHOI 390 - 11355 13832 0 2 1196,1234, 0,1243, -,-, 647055 Satellite W-chromosome 585 chrUn_NT_466906v1 736 2437 CR1-H2 718 + 736 2437 0 3 302,753,643, 0,302,1058, +,+,+, 647123 LINE CR1 585 chrUn_NT_466907v1 10311 14103 GGXHOI 384 - 10311 14103 0 4 1801,1033,555,358, 0,1813,2861,3434, -,-,-,-, 647135 Satellite W-chromosome 585 chrUn_NT_466908v1 3730 8709 GGXHOI 549 - 3730 8709 0 7 404,311,281,210,200,188,1357, 0,655,1009,1664,2271,3214,3622, -,-,-,-,-,-,-, 647141 Satellite W-chromosome 585 chrUn_NT_466908v1 9355 11211 GGXHOI 566 - 9355 11211 0 3 239,27,568, 0,1037,1288, -,-,-, 647152 Satellite W-chromosome 585 chrUn_NT_466908v1 11250 14175 GGXHOI 554 - 11250 14175 0 6 366,353,40,213,201,24, 0,740,1461,1751,2442,2901, -,-,-,-,-,-, 647156 Satellite W-chromosome 585 chrUn_NT_466909v1 757 1695 (CGAGG)n 606 + 757 1695 0 4 202,146,184,215, 0,376,539,723, +,+,+,+, 647166 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 1741 3723 (CGAGG)n 572 + 1741 3723 0 7 322,137,316,199,225,146,11, 0,501,824,1140,1382,1632,1971, +,+,+,+,+,+,+, 647169 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 4039 5791 (CGAGG)n 605 + 4039 5791 0 5 186,183,438,132,525, 0,238,477,1095,1227, +,+,+,+,+, 647176 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 5805 7483 (CGAGG)n 579 + 5805 7483 0 6 406,32,71,383,178,180, 0,592,806,899,1299,1498, +,+,+,+,+,+, 647179 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 7547 8811 (CGAGG)n 565 + 7547 8811 0 3 383,326,141, 0,438,1123, +,+,+, 647184 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 8942 10340 (CGAGG)n 577 + 8942 10340 0 5 212,164,62,211,217, 0,385,726,970,1181, +,+,+,+,+, 647187 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 10668 11578 (CGAGG)n 529 + 10668 11578 0 3 222,34,414, 0,462,496, +,+,+, 647194 Simple_repeat Simple_repeat 585 chrUn_NT_466909v1 12030 14084 (CGAGG)n 588 + 12030 14084 0 8 345,186,103,219,98,112,189,276, 0,375,799,930,1149,1427,1579,1778, +,+,+,+,+,+,+,+, 647201 Simple_repeat Simple_repeat 585 chrUn_NT_466911v1 2126 2219 CR1-E 653 + 2126 2219 0 2 49,44, 0,49, +,+, 647217 LINE CR1 585 chrUn_NT_466911v1 12131 14162 GGLTR7-int 385 - 12131 14162 0 3 271,948,684, 0,320,1347, -,-,-, 647224 LTR ERV1 585 chrUn_NT_466912v1 2957 3788 GGXHOI 377 - 2957 3788 0 2 475,300, 0,531, -,-, 647229 Satellite W-chromosome 585 chrUn_NT_466912v1 5058 6519 GGXHOI 363 - 5058 6519 0 2 505,941, 0,520, -,-, 647232 Satellite W-chromosome 585 chrUn_NT_466912v1 6629 7769 GGXHOI 351 - 6629 7769 0 2 693,385, 0,755, -,-, 647233 Satellite W-chromosome 585 chrUn_NT_466912v1 9677 10629 GGXHOI 338 - 9677 10629 0 2 471,465, 0,487, -,-, 647237 Satellite W-chromosome 585 chrUn_NT_466912v1 12055 12764 GGXHOI 355 - 12055 12764 0 2 386,305, 0,404, -,-, 647240 Satellite W-chromosome 585 chrUn_NT_466913v1 4368 14158 GGXHOI 409 + 4368 14158 0 3 5229,1377,3146, 0,5251,6644, +,+,+, 647245 Satellite W-chromosome 585 chrUn_NT_466914v1 10699 11494 CR1-F 277 - 10699 11494 0 2 564,217, 0,578, -,-, 647255 LINE CR1 585 chrUn_NT_466915v1 1971 2592 CR1-H 665 - 1971 2592 0 2 139,482, 0,139, -,-, 647262 LINE CR1 585 chrUn_NT_466915v1 4471 4904 CR1-H 377 - 4471 4904 0 2 166,267, 0,166, -,-, 647263 LINE CR1 585 chrUn_NT_466916v1 12144 12776 GGLTR11-int 495 - 12144 12776 0 2 228,119, 0,513, -,-, 647283 LTR ERV1 585 chrUn_NT_466917v1 1748 3473 CR1-G 516 - 1748 3473 0 3 386,157,603, 0,703,1122, -,-,-, 647288 LINE CR1 585 chrUn_NT_466918v1 1151 1965 (CAAGG)n 492 + 1151 1965 0 3 226,226,334, 0,226,480, +,+,+, 647298 Simple_repeat Simple_repeat 585 chrUn_NT_466918v1 2178 2473 (CCTTG)n 436 + 2178 2473 0 2 177,96, 0,199, +,+, 647299 Simple_repeat Simple_repeat 585 chrUn_NT_466918v1 2544 3138 (CCTTG)n 524 + 2544 3138 0 3 70,119,390, 0,85,204, +,+,+, 647301 Simple_repeat Simple_repeat 585 chrUn_NT_466918v1 10805 11899 GGXHOI 314 - 10805 11899 0 2 601,435, 0,659, -,-, 647311 Satellite W-chromosome 585 chrUn_NT_466918v1 13176 13785 GGXHOI 286 - 13176 13785 0 2 377,210, 0,399, -,-, 647314 Satellite W-chromosome 585 chrUn_NT_466919v1 1101 1960 (CTCTATGGGG)n 470 + 1101 1960 0 2 510,58, 0,801, +,+, 647322 Satellite Satellite 585 chrUn_NT_466919v1 1611 2094 (ACCCCATAGGG)n 476 + 1611 2094 0 3 145,29,192, 0,262,291, +,+,+, 647323 Satellite Satellite 585 chrUn_NT_466919v1 2651 2977 (CTCTATGGGG)n 650 - 2651 2977 0 2 179,26, 0,300, -,-, 647328 Satellite Satellite 585 chrUn_NT_466919v1 3050 3434 (CTCTATGGGG)n 606 + 3050 3434 0 2 181,82, 0,302, +,+, 647331 Satellite Satellite 585 chrUn_NT_466919v1 4107 4466 (CTCTATGGGG)n 576 - 4107 4466 0 2 91,29, 0,330, -,-, 647337 Satellite Satellite 585 chrUn_NT_466919v1 4685 4922 (CTCTATGGGG)n 504 - 4685 4922 0 2 88,29, 0,208, -,-, 647340 Satellite Satellite 585 chrUn_NT_466919v1 6616 6876 (ACCCATAGAG)n 496 + 6616 6876 0 2 114,25, 0,235, +,+, 647352 Satellite Satellite 585 chrUn_NT_466919v1 7049 7402 (ACCCATAGAG)n 612 + 7049 7402 0 2 131,101, 0,252, +,+, 647355 Satellite Satellite 585 chrUn_NT_466919v1 8564 9067 (CTCTATGGGG)n 492 + 8564 9067 0 3 155,219,129, 0,155,374, +,+,+, 647364 Satellite Satellite 585 chrUn_NT_466919v1 9012 9325 (ACCCATAGGG)n 408 + 9012 9325 0 2 159,38, 0,275, +,+, 647365 Satellite Satellite 585 chrUn_NT_466920v1 224 2092 GGXHOI 473 - 224 2092 0 2 105,1745, 0,123, -,-, 647370 Satellite W-chromosome 585 chrUn_NT_466921v1 4512 6972 GGLTR7-int 565 + 4512 6972 0 2 346,794, 0,1666, +,+, 647389 LTR ERV1 585 chrUn_NT_466921v1 6984 9424 GGERV10_LTR 848 - 6984 9424 0 2 38,41, 0,2399, -,-, 647392 LTR ERVL 585 chrUn_NT_466921v1 7150 9382 GGLTR10D-int 907 - 7150 9382 0 2 363,1866, 0,366, -,-, 647393 LTR ERVK 585 chrUn_NT_466921v1 10307 11265 (CGAGG)n 542 + 10307 11265 0 2 633,311, 0,647, +,+, 647396 Simple_repeat Simple_repeat 585 chrUn_NT_466921v1 11319 12957 (CGAGG)n 549 + 11319 12957 0 3 500,44,883, 0,677,755, +,+,+, 647398 Simple_repeat Simple_repeat 585 chrUn_NT_466922v1 7086 7697 CR1-H 617 - 7086 7697 0 2 129,475, 0,136, -,-, 647408 LINE CR1 585 chrUn_NT_466922v1 10146 10603 CR1-H 670 - 10146 10603 0 2 163,294, 0,163, -,-, 647412 LINE CR1 585 chrUn_NT_466923v1 1703 2883 (CAAGG)n 581 + 1703 2883 0 4 362,182,363,229, 0,388,588,951, +,+,+,+, 647425 Simple_repeat Simple_repeat 585 chrUn_NT_466923v1 2850 3363 (CAGGC)n 556 + 2850 3363 0 2 99,43, 0,470, +,+, 647426 Simple_repeat Simple_repeat 585 chrUn_NT_466923v1 3349 3746 (CAAGG)n 622 + 3349 3746 0 2 182,178, 0,219, +,+, 647428 Simple_repeat Simple_repeat 585 chrUn_NT_466923v1 6363 14098 GGXHOI 396 + 6363 14098 0 2 5672,2001, 0,5734, +,+, 647433 Satellite W-chromosome 585 chrUn_NT_466925v1 536 1221 (CGAGG)n 535 + 536 1221 0 2 183,452, 0,233, +,+, 647437 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 2121 3791 (CGAGG)n 536 + 2121 3791 0 5 183,638,25,178,311, 0,236,1057,1132,1359, +,+,+,+,+, 647440 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 3835 4239 (CGAGG)n 552 + 3835 4239 0 2 45,314, 0,90, +,+, 647443 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 4452 5118 (CGAGG)n 546 + 4452 5118 0 2 180,431, 0,235, +,+, 647446 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 6871 7541 (CGAGG)n 526 + 6871 7541 0 2 183,442, 0,228, +,+, 647456 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 8459 10611 (CGAGG)n 534 + 8459 10611 0 5 183,842,178,218,436, 0,236,1133,1360,1716, +,+,+,+,+, 647460 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 10792 11501 (CGAGG)n 552 + 10792 11501 0 2 180,474, 0,235, +,+, 647463 Simple_repeat Simple_repeat 585 chrUn_NT_466925v1 13231 13909 (CGAGG)n 483 + 13231 13909 0 2 475,192, 0,486, +,+, 647472 Simple_repeat Simple_repeat 585 chrUn_NT_466926v1 6120 7171 GGXHOI 378 - 6120 7171 0 2 516,472, 0,579, -,-, 647481 Satellite W-chromosome 585 chrUn_NT_466926v1 9063 11088 GGXHOI 385 - 9063 11088 0 2 968,1000, 0,1025, -,-, 647484 Satellite W-chromosome 585 chrUn_NT_466927v1 3850 4471 CR1-H 678 + 3850 4471 0 2 476,139, 0,482, +,+, 647493 LINE CR1 585 chrUn_NT_466928v1 2430 3322 (CGAGG)n 493 + 2430 3322 0 2 168,661, 0,231, +,+, 647512 Simple_repeat Simple_repeat 585 chrUn_NT_466928v1 3822 4202 (CGAGG)n 521 + 3822 4202 0 2 185,174, 0,206, +,+, 647516 Simple_repeat Simple_repeat 585 chrUn_NT_466928v1 4978 6157 (CGAGG)n 499 + 4978 6157 0 3 396,474,117, 0,411,1062, +,+,+, 647523 Simple_repeat Simple_repeat 585 chrUn_NT_466928v1 9132 9538 (CGAGG)n 520 + 9132 9538 0 2 172,54, 0,352, +,+, 647539 Simple_repeat Simple_repeat 585 chrUn_NT_466928v1 10561 11077 (CGAGG)n 522 + 10561 11077 0 2 304,182, 0,334, +,+, 647547 Simple_repeat Simple_repeat 585 chrUn_NT_466928v1 12901 13457 (CGAGG)n 512 + 12901 13457 0 2 167,208, 0,348, +,+, 647558 Simple_repeat Simple_repeat 585 chrUn_NT_466929v1 2892 5140 GGXHOI 514 - 2892 5140 0 2 538,1370, 0,878, -,-, 647568 Satellite W-chromosome 585 chrUn_NT_466929v1 5209 6325 GGXHOI 552 - 5209 6325 0 2 547,225, 0,891, -,-, 647570 Satellite W-chromosome 585 chrUn_NT_466929v1 6395 7500 GGXHOI 524 - 6395 7500 0 2 545,226, 0,879, -,-, 647572 Satellite W-chromosome 585 chrUn_NT_466929v1 8785 9882 GGXHOI 490 - 8785 9882 0 2 669,212, 0,885, -,-, 647575 Satellite W-chromosome 585 chrUn_NT_466929v1 10475 11062 GGXHOI 494 - 10475 11062 0 2 22,225, 0,362, -,-, 647579 Satellite W-chromosome 585 chrUn_NT_466929v1 11128 12274 GGXHOI 488 - 11128 12274 0 2 574,224, 0,922, -,-, 647581 Satellite W-chromosome 585 chrUn_NT_466929v1 12487 13368 GGXHOI 494 - 12487 13368 0 3 283,18,227, 0,296,654, -,-,-, 647583 Satellite W-chromosome 585 chrUn_NT_466932v1 8336 14039 GGXHOI 394 - 8336 14039 0 5 2867,960,414,863,508, 0,2906,3879,4314,5195, -,-,-,-,-, 647604 Satellite W-chromosome 585 chrUn_NT_466933v1 3226 14116 GGXHOI 375 - 3226 14116 0 12 306,180,1853,684,1049,1577,2354,500,701,458,725,304, 0,332,524,2394,3094,4156,5749,8126,8640,9364,9836,10586, -,-,-,-,-,-,-,-,-,-,-,-, 647607 Satellite W-chromosome 585 chrUn_NT_466934v1 11263 12298 GGXHOI 333 + 11263 12298 0 2 560,461, 0,574, +,+, 647617 Satellite W-chromosome 585 chrUn_NT_466934v1 13596 14070 GGXHOI 336 + 13596 14070 0 2 262,194, 0,280, +,+, 647621 Satellite W-chromosome 585 chrUn_NT_466935v1 8347 14069 GGXHOI 386 - 8347 14069 0 5 227,169,2920,844,1487, 0,244,426,3364,4235, -,-,-,-,-, 647624 Satellite W-chromosome 585 chrUn_NT_466936v1 5410 5551 GA-rich 252 + 5410 5551 0 2 43,65, 0,76, +,+, 647633 Low_complexity Low_complexity 585 chrUn_NT_466937v1 7665 8272 (ACCCCATAGGG)n 294 + 7665 8272 0 3 183,221,154, 0,222,453, +,+,+, 647652 Satellite Satellite 585 chrUn_NT_466937v1 9469 10094 (ACCCCATAGGG)n 460 - 9469 10094 0 4 134,115,113,108, 0,166,342,517, -,-,-,-, 647658 Satellite Satellite 585 chrUn_NT_466937v1 10163 11599 (ACCCCATAGGG)n 407 - 10163 11599 0 4 638,130,463,129, 0,654,828,1307, -,-,-,-, 647659 Satellite Satellite 585 chrUn_NT_466940v1 1317 2780 GGXHOI 568 + 1317 2780 0 2 175,1032, 0,431, +,+, 647683 Satellite W-chromosome 585 chrUn_NT_466940v1 2849 4296 GGXHOI 559 + 2849 4296 0 2 369,1036, 0,411, +,+, 647685 Satellite W-chromosome 585 chrUn_NT_466940v1 11463 12614 GGXHOI 419 + 11463 12614 0 3 662,298,148, 0,681,1003, +,+,+, 647691 Satellite W-chromosome 585 chrUn_NT_466940v1 12686 14052 GGXHOI 542 + 12686 14052 0 3 186,270,655, 0,408,711, +,+,+, 647692 Satellite W-chromosome 585 chrUn_NT_466942v1 2232 4013 GGXHOI 396 - 2232 4013 0 2 1382,381, 0,1400, -,-, 647706 Satellite W-chromosome 585 chrUn_NT_466942v1 6618 8717 GGXHOI 342 - 6618 8717 0 2 806,1274, 0,825, -,-, 647708 Satellite W-chromosome 585 chrUn_NT_466942v1 11102 14110 GGXHOI 304 - 11102 14110 0 2 2829,158, 0,2850, -,-, 647710 Satellite W-chromosome 585 chrUn_NT_466943v1 3321 6022 GGERVL-B-int 633 + 3321 6022 0 2 1772,929, 0,1772, +,+, 647724 LTR ERVL 585 chrUn_NT_466943v1 6762 8165 GGLTR7-int 342 + 6762 8165 0 3 101,235,283, 0,127,1120, +,+,+, 647726 LTR ERV1 585 chrUn_NT_466944v1 846 1798 GGXHOI 316 + 846 1798 0 2 140,760, 0,192, +,+, 647731 Satellite W-chromosome 585 chrUn_NT_466944v1 1897 3437 GGXHOI 381 + 1897 3437 0 2 466,1011, 0,529, +,+, 647732 Satellite W-chromosome 585 chrUn_NT_466944v1 4193 5072 GGXHOI 397 + 4193 5072 0 2 389,472, 0,407, +,+, 647734 Satellite W-chromosome 585 chrUn_NT_466944v1 6401 7663 GGXHOI 390 + 6401 7663 0 2 259,963, 0,299, +,+, 647737 Satellite W-chromosome 585 chrUn_NT_466945v1 383 1286 (TTAGGG)n 664 + 383 1286 0 3 184,177,477, 0,201,426, +,+,+, 647750 Simple_repeat Simple_repeat 585 chrUn_NT_466945v1 1357 2129 (TTAGGG)n 668 + 1357 2129 0 3 178,122,289, 0,199,483, +,+,+, 647752 Simple_repeat Simple_repeat 585 chrUn_NT_466945v1 2131 4350 (CCCTAA)n 603 + 2131 4350 0 7 71,190,181,375,208,357,633, 0,83,284,477,852,1084,1586, +,+,+,+,+,+,+, 647754 Simple_repeat Simple_repeat 585 chrUn_NT_466945v1 4370 5996 (CCCTAA)n 599 + 4370 5996 0 6 186,186,228,137,383,176, 0,224,460,862,1034,1450, +,+,+,+,+,+, 647757 Simple_repeat Simple_repeat 585 chrUn_NT_466945v1 10771 14101 GGXHOI 428 + 10771 14101 0 3 1180,803,1311, 0,1201,2019, +,+,+, 647776 Satellite W-chromosome 585 chrUn_NT_466946v1 4931 6558 GGXHOI 259 - 4931 6558 0 2 151,1464, 0,163, -,-, 647779 Satellite W-chromosome 585 chrUn_NT_466946v1 6695 7380 GGXHOI 313 - 6695 7380 0 2 353,316, 0,369, -,-, 647780 Satellite W-chromosome 585 chrUn_NT_466946v1 7461 14097 GGXHOI 355 - 7461 14097 0 10 358,162,109,789,1035,2475,164,322,842,139, 0,369,581,704,1509,2555,5050,5275,5610,6497, -,-,-,-,-,-,-,-,-,-, 647781 Satellite W-chromosome 585 chrUn_NT_466947v1 2348 2621 CR1-Y4 636 + 2348 2621 0 2 166,107, 0,166, +,+, 647788 LINE CR1 585 chrUn_NT_466947v1 6030 8326 CR1-Y3 428 - 6030 8326 0 3 462,729,223, 0,875,2073, -,-,-, 647796 LINE CR1 585 chrUn_NT_466947v1 6562 6905 GGLTR7A 621 + 6562 6905 0 2 32,300, 0,43, +,+, 647797 LTR ERV1 585 chrUn_NT_466948v1 5651 7717 GGLTR7-int 650 - 5651 7717 0 4 33,74,763,538, 0,34,738,1528, -,-,-,-, 647808 LTR ERV1 585 chrUn_NT_466949v1 4822 9836 GGXHOI 390 - 4822 9836 0 4 1418,219,644,2665, 0,1441,1676,2349, -,-,-,-, 647815 Satellite W-chromosome 585 chrUn_NT_466949v1 9942 10784 GGXHOI 363 - 9942 10784 0 3 141,413,229, 0,154,613, -,-,-, 647816 Satellite W-chromosome 585 chrUn_NT_466949v1 10915 13197 GGXHOI 316 - 10915 13197 0 2 1751,518, 0,1764, -,-, 647817 Satellite W-chromosome 585 chrUn_NT_466950v1 3014 5161 GGXHOI 377 + 3014 5161 0 3 679,681,719, 0,736,1428, +,+,+, 647824 Satellite W-chromosome 585 chrUn_NT_466950v1 5343 6385 GGXHOI 352 + 5343 6385 0 2 269,756, 0,286, +,+, 647825 Satellite W-chromosome 585 chrUn_NT_466950v1 7264 9375 GGXHOI 378 + 7264 9375 0 3 311,1005,720, 0,328,1391, +,+,+, 647827 Satellite W-chromosome 585 chrUn_NT_466950v1 9556 10473 GGXHOI 346 + 9556 10473 0 2 268,632, 0,285, +,+, 647828 Satellite W-chromosome 585 chrUn_NT_466950v1 10722 12584 GGXHOI 373 + 10722 12584 0 3 597,679,469, 0,655,1393, +,+,+, 647829 Satellite W-chromosome 585 chrUn_NT_466950v1 12671 14091 GGXHOI 345 + 12671 14091 0 2 732,671, 0,749, +,+, 647830 Satellite W-chromosome 585 chrUn_NT_466951v1 675 1007 GGXHOI 390 - 675 1007 0 2 146,164, 0,168, -,-, 647832 Satellite W-chromosome 585 chrUn_NT_466951v1 1186 3378 GGXHOI 379 - 1186 3378 0 5 196,248,977,445,218, 0,212,508,1499,1974, -,-,-,-,-, 647833 Satellite W-chromosome 585 chrUn_NT_466951v1 3774 8733 GGXHOI 398 - 3774 8733 0 5 482,866,1416,1608,400, 0,512,1426,2889,4559, -,-,-,-,-, 647837 Satellite W-chromosome 585 chrUn_NT_466951v1 10557 12660 GGXHOI 405 - 10557 12660 0 2 861,1195, 0,908, -,-, 647844 Satellite W-chromosome 585 chrUn_NT_466952v1 1192 4267 GGXHOI 362 - 1192 4267 0 6 686,294,202,251,221,1339, 0,706,1017,1235,1504,1736, -,-,-,-,-,-, 647848 Satellite W-chromosome 585 chrUn_NT_466952v1 4949 7288 GGXHOI 352 - 4949 7288 0 3 1109,572,595, 0,1125,1744, -,-,-, 647850 Satellite W-chromosome 585 chrUn_NT_466952v1 8146 13379 GGXHOI 358 - 8146 13379 0 4 526,306,2437,1896, 0,541,874,3337, -,-,-,-, 647852 Satellite W-chromosome 585 chrUn_NT_466954v1 562 1219 (CGAGG)n 565 + 562 1219 0 2 180,463, 0,194, +,+, 647876 Simple_repeat Simple_repeat 585 chrUn_NT_466954v1 1353 2430 (CGAGG)n 454 + 1353 2430 0 2 190,842, 0,235, +,+, 647878 Simple_repeat Simple_repeat 585 chrUn_NT_466954v1 4671 6476 (CGAGG)n 532 + 4671 6476 0 6 354,172,308,399,177,294, 0,371,572,895,1314,1511, +,+,+,+,+,+, 647889 Simple_repeat Simple_repeat 585 chrUn_NT_466954v1 6769 8837 (CGAGG)n 524 + 6769 8837 0 4 297,823,99,471, 0,463,1316,1597, +,+,+,+, 647892 Simple_repeat Simple_repeat 585 chrUn_NT_466954v1 10834 11712 (CGAGG)n 521 + 10834 11712 0 3 177,440,180, 0,223,698, +,+,+, 647904 Simple_repeat Simple_repeat 585 chrUn_NT_466954v1 11949 12848 (CGAGG)n 464 + 11949 12848 0 2 702,197, 0,702, +,+, 647906 Simple_repeat Simple_repeat 585 chrUn_NT_466954v1 13072 13625 (CGAGG)n 534 + 13072 13625 0 2 333,182, 0,371, +,+, 647908 Simple_repeat Simple_repeat 585 chrUn_NT_466957v1 8963 9238 (ACCCCATAGGG)n 476 + 8963 9238 0 2 138,116, 0,159, +,+, 647932 Satellite Satellite 585 chrUn_NT_466958v1 208 1076 (CGAGG)n 519 + 208 1076 0 3 374,174,257, 0,404,611, +,+,+, 647940 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 1543 2244 (CGAGG)n 505 + 1543 2244 0 2 324,363, 0,338, +,+, 647943 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 3544 6461 (CGAGG)n 565 + 3544 6461 0 9 352,149,205,161,89,65,180,384,259, 0,534,893,1118,1456,1727,1827,2007,2658, +,+,+,+,+,+,+,+,+, 647948 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 6490 7007 (CGAGG)n 610 + 6490 7007 0 2 119,45, 0,472, +,+, 647956 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 7098 8207 (CGAGG)n 576 + 7098 8207 0 4 290,22,68,135, 0,470,755,974, +,+,+,+, 647960 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 8242 9024 (CGAGG)n 628 + 8242 9024 0 2 180,602, 0,180, +,+, 647966 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 8614 9190 (CAAGG)n 432 + 8614 9190 0 2 249,142, 0,434, +,+, 647967 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 9578 11581 (CGAGG)n 584 + 9578 11581 0 6 181,136,108,65,180,916, 0,201,517,807,907,1087, +,+,+,+,+,+, 647971 Simple_repeat Simple_repeat 585 chrUn_NT_466958v1 11594 13991 (CGAGG)n 548 + 11594 13991 0 7 258,236,38,185,49,473,338, 0,439,856,894,1340,1405,2059, +,+,+,+,+,+,+, 647976 Simple_repeat Simple_repeat 585 chrUn_NT_466959v1 2226 8831 GGXHOI 439 - 2226 8831 0 9 728,1141,1140,148,977,1138,147,900,145, 0,748,1909,3069,3231,4228,5386,5547,6460, -,-,-,-,-,-,-,-,-, 647984 Satellite W-chromosome 585 chrUn_NT_466959v1 8963 10966 GGXHOI 433 - 8963 10966 0 3 766,1058,146, 0,786,1857, -,-,-, 647985 Satellite W-chromosome 585 chrUn_NT_466959v1 11121 14057 GGXHOI 411 - 11121 14057 0 3 729,1223,949, 0,749,1987, -,-,-, 647986 Satellite W-chromosome 585 chrUn_NT_466961v1 549 7337 GGXHOI 384 + 549 7337 0 3 387,4466,1814, 0,446,4974, +,+,+, 647996 Satellite W-chromosome 585 chrUn_NT_466961v1 7610 9172 GGXHOI 410 + 7610 9172 0 2 400,1107, 0,455, +,+, 647997 Satellite W-chromosome 585 chrUn_NT_466961v1 9278 9589 GGXHOI 348 + 9278 9589 0 2 154,137, 0,174, +,+, 647998 Satellite W-chromosome 585 chrUn_NT_466961v1 10742 13069 GGXHOI 361 + 10742 13069 0 2 1988,323, 0,2004, +,+, 648002 Satellite W-chromosome 585 chrUn_NT_466961v1 13269 13865 GGXHOI 389 + 13269 13865 0 2 292,241, 0,355, +,+, 648004 Satellite W-chromosome 585 chrUn_NT_466962v1 44 1001 GGXHOI 361 + 44 1001 0 4 187,237,208,263, 0,217,473,694, +,+,+,+, 648006 Satellite W-chromosome 585 chrUn_NT_466962v1 1105 2039 GGXHOI 379 + 1105 2039 0 3 358,180,359, 0,378,575, +,+,+, 648007 Satellite W-chromosome 585 chrUn_NT_466962v1 8438 9996 GGXHOI 368 - 8438 9996 0 2 1101,394, 0,1164, -,-, 648015 Satellite W-chromosome 585 chrUn_NT_466962v1 10807 12106 GGXHOI 375 - 10807 12106 0 2 200,1036, 0,263, -,-, 648017 Satellite W-chromosome 585 chrUn_NT_466962v1 12780 13742 GGXHOI 385 - 12780 13742 0 2 514,385, 0,577, -,-, 648019 Satellite W-chromosome 585 chrUn_NT_466963v1 1718 2342 CR1-H 371 - 1718 2342 0 2 378,210, 0,414, -,-, 648022 LINE CR1 585 chrUn_NT_466963v1 4211 4833 CR1-H 372 - 4211 4833 0 2 379,208, 0,414, -,-, 648025 LINE CR1 585 chrUn_NT_466963v1 4851 5992 CR1-C2 686 + 4851 5992 0 2 133,86, 0,1055, +,+, 648026 LINE CR1 585 chrUn_NT_466963v1 8910 10158 Char12Mar1_GG 590 - 8910 10158 0 2 121,580, 0,668, -,-, 648030 DNA hAT-Charlie 585 chrUn_NT_466963v1 12680 13136 CR1-H 386 - 12680 13136 0 2 218,204, 0,252, -,-, 648034 LINE CR1 585 chrUn_NT_466964v1 805 1808 GGXHOI 489 + 805 1808 0 2 520,472, 0,531, +,+, 648037 Satellite W-chromosome 585 chrUn_NT_466964v1 1927 2918 GGXHOI 564 + 1927 2918 0 2 691,19, 0,972, +,+, 648038 Satellite W-chromosome 585 chrUn_NT_466964v1 2994 4058 GGXHOI 524 + 2994 4058 0 2 781,19, 0,1045, +,+, 648040 Satellite W-chromosome 585 chrUn_NT_466964v1 4134 12152 GGXHOI 557 + 4134 12152 0 15 208,193,298,111,296,194,338,512,300,156,245,194,300,111,17, 0,515,1031,1802,2236,2843,3360,3714,4549,5037,5668,6358,6875,7567,8001, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 648042 Satellite W-chromosome 585 chrUn_NT_466964v1 12222 13871 GGXHOI 402 + 12222 13871 0 3 209,989,128, 0,481,1521, +,+,+, 648056 Satellite W-chromosome 585 chrUn_NT_466965v1 1511 12307 GGXHOI 421 - 1511 12307 0 10 515,2668,144,2504,404,395,1100,606,929,1327, 0,532,3221,3382,5902,6358,6775,7892,8519,9469, -,-,-,-,-,-,-,-,-,-, 648061 Satellite W-chromosome 585 chrUn_NT_466966v1 2475 3909 GGXHOI 564 - 2475 3909 0 2 247,1135, 0,299, -,-, 648065 Satellite W-chromosome 585 chrUn_NT_466966v1 5201 8963 GGXHOI 517 - 5201 8963 0 2 2560,1183, 0,2579, -,-, 648067 Satellite W-chromosome 585 chrUn_NT_466966v1 9056 13120 GGXHOI 557 - 9056 13120 0 2 2708,1342, 0,2722, -,-, 648068 Satellite W-chromosome 585 chrUn_NT_466967v1 8452 10827 GGLTR7-int 371 + 8452 10827 0 3 409,1162,763, 0,441,1612, +,+,+, 648078 LTR ERV1 585 chrUn_NT_466967v1 11001 12985 GGLTR10D-int 917 - 11001 12985 0 3 363,981,461, 0,369,1523, -,-,-, 648080 LTR ERVK 585 chrUn_NT_466967v1 13026 13776 (CGAGG)n 534 + 13026 13776 0 4 180,127,19,79, 0,192,508,671, +,+,+,+, 648082 Simple_repeat Simple_repeat 585 chrUn_NT_466968v1 5979 6436 (CCTTG)n 497 + 5979 6436 0 2 258,199, 0,258, +,+, 648087 Simple_repeat Simple_repeat 585 chrUn_NT_466968v1 6583 7791 (CCTTG)n 572 + 6583 7791 0 5 213,163,270,15,157, 0,240,403,858,1051, +,+,+,+,+, 648089 Simple_repeat Simple_repeat 585 chrUn_NT_466968v1 7886 8483 (CCTTG)n 446 + 7886 8483 0 3 146,72,207, 0,318,390, +,+,+, 648093 Simple_repeat Simple_repeat 585 chrUn_NT_466968v1 9274 12820 GGLTR7A 485 + 9274 12820 0 2 3146,317, 0,3229, +,+, 648101 LTR ERV1 585 chrUn_NT_466968v1 13712 14038 (CCTTG)n 571 + 13712 14038 0 2 174,132, 0,194, +,+, 648106 Simple_repeat Simple_repeat 585 chrUn_NT_466971v1 2732 4164 GGXHOI 392 - 2732 4164 0 2 351,1060, 0,372, -,-, 648122 Satellite W-chromosome 585 chrUn_NT_466971v1 4333 12494 GGXHOI 397 - 4333 12494 0 4 2863,2329,2373,529, 0,2882,5240,7632, -,-,-,-, 648123 Satellite W-chromosome 585 chrUn_NT_466971v1 12637 14044 GGXHOI 397 - 12637 14044 0 2 271,1107, 0,300, -,-, 648124 Satellite W-chromosome 585 chrUn_NT_466973v1 4173 4790 CR1-H 674 - 4173 4790 0 2 138,473, 0,144, -,-, 648129 LINE CR1 585 chrUn_NT_466973v1 6575 7746 CR1-H 686 - 6575 7746 0 4 116,209,60,659, 0,116,357,512, -,-,-,-, 648134 LINE CR1 585 chrUn_NT_466973v1 9470 9578 (TTTGC)n 358 + 9470 9578 0 2 45,8, 0,100, +,+, 648136 Simple_repeat Simple_repeat 585 chrUn_NT_466974v1 2578 4511 GGXHOI 383 + 2578 4511 0 2 819,1102, 0,831, +,+, 648147 Satellite W-chromosome 585 chrUn_NT_466974v1 4606 6811 GGXHOI 415 + 4606 6811 0 2 1597,585, 0,1620, +,+, 648148 Satellite W-chromosome 585 chrUn_NT_466974v1 6910 8253 GGXHOI 377 + 6910 8253 0 2 588,739, 0,604, +,+, 648149 Satellite W-chromosome 585 chrUn_NT_466974v1 8352 14038 GGXHOI 411 + 8352 14038 0 4 156,3328,826,1319, 0,171,3522,4367, +,+,+,+, 648150 Satellite W-chromosome 585 chrUn_NT_466975v1 7132 7557 CR1-Y 731 + 7132 7557 0 2 34,391, 0,34, +,+, 648155 LINE CR1 585 chrUn_NT_466975v1 11162 11371 CR1-H 602 + 11162 11371 0 2 86,115, 0,94, +,+, 648161 LINE CR1 585 chrUn_NT_466976v1 1786 3808 GGXHOI 374 - 1786 3808 0 2 1487,472, 0,1550, -,-, 648167 Satellite W-chromosome 585 chrUn_NT_466976v1 3907 5334 GGXHOI 371 - 3907 5334 0 2 462,934, 0,493, -,-, 648168 Satellite W-chromosome 585 chrUn_NT_466976v1 6009 7588 GGXHOI 387 - 6009 7588 0 2 516,1000, 0,579, -,-, 648170 Satellite W-chromosome 585 chrUn_NT_466976v1 9235 10286 GGXHOI 378 - 9235 10286 0 2 516,472, 0,579, -,-, 648173 Satellite W-chromosome 585 chrUn_NT_466976v1 13524 13975 GGXHOI 278 - 13524 13975 0 2 99,307, 0,144, -,-, 648178 Satellite W-chromosome 585 chrUn_NT_466977v1 5435 8546 GGLTR7-int 422 - 5435 8546 0 4 277,949,1627,116, 0,324,1368,2995, -,-,-,-, 648181 LTR ERV1 585 chrUn_NT_466979v1 9681 10417 GGXHOI 275 - 9681 10417 0 2 576,136, 0,600, -,-, 648196 Satellite W-chromosome 585 chrUn_NT_466979v1 10484 12543 GGXHOI 348 - 10484 12543 0 2 806,1236, 0,823, -,-, 648197 Satellite W-chromosome 585 chrUn_NT_466979v1 12652 14019 GGXHOI 335 - 12652 14019 0 2 846,505, 0,862, -,-, 648198 Satellite W-chromosome 585 chrUn_NT_466982v1 9076 10594 GGXHOI 356 - 9076 10594 0 2 191,1304, 0,214, -,-, 648227 Satellite W-chromosome 585 chrUn_NT_466982v1 10690 13022 GGXHOI 423 - 10690 13022 0 2 1970,339, 0,1993, -,-, 648228 Satellite W-chromosome 585 chrUn_NT_466982v1 13149 13966 GGXHOI 439 - 13149 13966 0 3 150,353,272, 0,176,545, -,-,-, 648229 Satellite W-chromosome 585 chrUn_NT_466984v1 2129 8877 GGXHOI 380 - 2129 8877 0 9 511,259,307,761,1062,595,2554,354,146, 0,571,852,1176,1953,3031,3655,6225,6602, -,-,-,-,-,-,-,-,-, 648238 Satellite W-chromosome 585 chrUn_NT_466984v1 9036 9994 GGXHOI 377 - 9036 9994 0 2 580,316, 0,642, -,-, 648239 Satellite W-chromosome 585 chrUn_NT_466984v1 10751 13808 GGXHOI 372 - 10751 13808 0 5 471,224,1063,844,349, 0,523,763,1848,2708, -,-,-,-,-, 648241 Satellite W-chromosome 585 chrUn_NT_466985v1 2382 3004 CR1-H 678 - 2382 3004 0 2 139,477, 0,145, -,-, 648243 LINE CR1 585 chrUn_NT_466985v1 5626 6083 CR1-H 677 - 5626 6083 0 2 163,294, 0,163, -,-, 648247 LINE CR1 585 chrUn_NT_466987v1 3007 5816 Char12Mar1_GG 431 - 3007 5816 0 2 902,251, 0,2558, -,-, 648265 DNA hAT-Charlie 585 chrUn_NT_466988v1 10516 11829 GGLTR7-int 189 - 10516 11829 0 2 242,246, 0,1067, -,-, 648285 LTR ERV1 585 chrUn_NT_466988v1 12672 14021 GGERVL-B-int 795 - 12672 14021 0 2 883,466, 0,883, -,-, 648287 LTR ERVL 585 chrUn_NT_466990v1 7203 7761 GGXHOI 466 - 7203 7761 0 2 371,140, 0,418, -,-, 648307 Satellite W-chromosome 585 chrUn_NT_466991v1 2905 3457 GA-rich 486 + 2905 3457 0 2 362,177, 0,375, +,+, 648317 Low_complexity Low_complexity 585 chrUn_NT_466992v1 469 4932 GGXHOI 563 - 469 4932 0 4 1341,203,49,679, 0,1839,3692,3784, -,-,-,-, 648327 Satellite W-chromosome 585 chrUn_NT_466992v1 4415 7252 Sat-CR1_GG 188 - 4415 7252 0 3 560,43,867, 0,1225,1970, -,-,-, 648330 Satellite Satellite 585 chrUn_NT_466992v1 6421 8026 GGXHOI 549 - 6421 8026 0 2 884,659, 0,946, -,-, 648333 Satellite W-chromosome 585 chrUn_NT_466992v1 8062 11540 GGXHOI 556 - 8062 11540 0 2 134,2598, 0,880, -,-, 648335 Satellite W-chromosome 585 chrUn_NT_466992v1 9217 12423 Sat-CR1_GG 166 - 9217 12423 0 2 2393,186, 0,3020, -,-, 648337 Satellite Satellite 585 chrUn_NT_466992v1 13058 14019 GGXHOI 476 - 13058 14019 0 2 426,26, 0,935, -,-, 648341 Satellite W-chromosome 585 chrUn_NT_466993v1 1217 12116 GGXHOI 430 - 1217 12116 0 4 1419,5409,1840,2151, 0,1436,6891,8748, -,-,-,-, 648345 Satellite W-chromosome 585 chrUn_NT_466993v1 12191 14010 GGXHOI 429 - 12191 14010 0 2 1622,143, 0,1676, -,-, 648346 Satellite W-chromosome 585 chrUn_NT_466995v1 1330 1918 GGXHOI 540 + 1330 1918 0 2 257,128, 0,460, +,+, 648400 Satellite W-chromosome 585 chrUn_NT_466995v1 2700 13543 GGXHOI 558 + 2700 13543 0 18 1291,194,298,194,197,194,299,194,300,194,197,194,299,194,298,194,300,351, 0,1602,2119,2728,3245,3855,4372,4982,5499,6110,6627,7237,7754,8364,8881,9490,10007,10492, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 648406 Satellite W-chromosome 585 chrUn_NT_466995v1 13665 14011 GGXHOI 566 + 13665 14011 0 2 46,49, 0,297, +,+, 648424 Satellite W-chromosome 585 chrUn_NT_466996v1 1885 2497 CR1-X 432 - 1885 2497 0 4 271,124,171,46, 0,271,395,566, -,-,-,-, 648429 LINE CR1 585 chrUn_NT_466996v1 8786 9906 CR1-B2 690 + 8786 9906 0 2 225,892, 0,228, +,+, 648434 LINE CR1 585 chrUn_NT_466997v1 322 1045 (CGAGG)n 502 + 322 1045 0 2 157,388, 0,335, +,+, 648445 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 1060 2428 (CGAGG)n 504 + 1060 2428 0 4 188,481,251,34, 0,242,744,1334, +,+,+,+, 648448 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 2435 2814 (CGGGG)n 438 + 2435 2814 0 2 182,178, 0,201, +,+, 648451 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 2860 3515 (CGAGG)n 510 + 2860 3515 0 2 335,129, 0,526, +,+, 648453 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 3784 5425 (CGAGG)n 484 + 3784 5425 0 3 121,763,400, 0,456,1241, +,+,+, 648456 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 5847 6337 (CGAGG)n 530 + 5847 6337 0 2 280,179, 0,311, +,+, 648460 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 7768 9297 (CGAGG)n 509 + 7768 9297 0 2 968,541, 0,988, +,+, 648465 Simple_repeat Simple_repeat 585 chrUn_NT_466997v1 10249 10812 (CGAGG)n 508 + 10249 10812 0 2 183,355, 0,208, +,+, 648469 Simple_repeat Simple_repeat 585 chrUn_NT_466998v1 215 3054 GGERVL-B-int 673 + 215 3054 0 2 1953,846, 0,1993, +,+, 648481 LTR ERVL 585 chrUn_NT_466998v1 3730 5113 GGLTR7-int 295 + 3730 5113 0 3 96,316,283, 0,98,1100, +,+,+, 648483 LTR ERV1 585 chrUn_NT_466999v1 7873 8223 (ACCCATAGGG)n 725 + 7873 8223 0 2 226,124, 0,226, +,+, 648504 Satellite Satellite 585 chrUn_NT_466999v1 8479 8798 (CCCCATTGGG)n 355 + 8479 8798 0 2 140,140, 0,179, +,+, 648506 Satellite Satellite 585 chrUn_NT_466999v1 10884 11027 (G)n 827 + 10884 11027 0 2 28,57, 0,86, +,+, 648511 Simple_repeat Simple_repeat 585 chrUn_NT_466999v1 12808 12869 (GAGCGG)n 432 + 12808 12869 0 2 23,7, 0,54, +,+, 648512 Simple_repeat Simple_repeat 585 chrUn_NT_467000v1 2810 5456 GGXHOI 391 - 2810 5456 0 2 1262,1368, 0,1278, -,-, 648518 Satellite W-chromosome 585 chrUn_NT_467000v1 6717 8864 GGXHOI 397 - 6717 8864 0 2 1111,1012, 0,1135, -,-, 648522 Satellite W-chromosome 585 chrUn_NT_467000v1 12325 13993 GGXHOI 372 - 12325 13993 0 2 275,1352, 0,316, -,-, 648528 Satellite W-chromosome 585 chrUn_NT_467001v1 122 3767 (CGAGG)n 570 + 122 3767 0 10 444,179,539,178,225,94,467,179,181,813, 0,464,658,1225,1423,1828,1937,2424,2624,2832, +,+,+,+,+,+,+,+,+,+, 648531 Simple_repeat Simple_repeat 585 chrUn_NT_467001v1 5145 5879 (CGAGG)n 556 + 5145 5879 0 2 343,113, 0,621, +,+, 648540 Simple_repeat Simple_repeat 585 chrUn_NT_467001v1 5964 6885 (CGAGG)n 565 + 5964 6885 0 3 227,147,350, 0,398,571, +,+,+, 648543 Simple_repeat Simple_repeat 585 chrUn_NT_467001v1 7183 9905 GGERVL-B-int 770 + 7183 9905 0 2 321,2401, 0,321, +,+, 648546 LTR ERVL 585 chrUn_NT_467001v1 9988 10231 (CTCTATGGGG)n 442 - 9988 10231 0 2 106,31, 0,212, -,-, 648547 Satellite Satellite 585 chrUn_NT_467001v1 10625 10990 GGLTR7B 308 + 10625 10990 0 2 104,235, 0,130, +,+, 648549 LTR ERV1 585 chrUn_NT_467002v1 5059 8289 GGXHOI 387 - 5059 8289 0 3 2702,358,130, 0,2721,3100, -,-,-, 648552 Satellite W-chromosome 585 chrUn_NT_467002v1 11447 13992 GGXHOI 376 - 11447 13992 0 3 314,1976,179, 0,373,2366, -,-,-, 648554 Satellite W-chromosome 585 chrUn_NT_467003v1 4306 9341 GGXHOI 340 - 4306 9341 0 5 2401,1031,866,552,126, 0,2415,3469,4346,4909, -,-,-,-,-, 648556 Satellite W-chromosome 585 chrUn_NT_467003v1 9434 12197 GGXHOI 393 - 9434 12197 0 3 898,530,1304, 0,910,1459, -,-,-, 648557 Satellite W-chromosome 585 chrUn_NT_467003v1 12287 13939 GGXHOI 382 - 12287 13939 0 3 216,302,1071, 0,234,581, -,-,-, 648558 Satellite W-chromosome 585 chrUn_NT_467004v1 3475 8074 GGXHOI 397 - 3475 8074 0 6 1585,226,1489,172,271,713, 0,1608,1852,3402,3593,3886, -,-,-,-,-,-, 648561 Satellite W-chromosome 585 chrUn_NT_467004v1 8172 8862 GGXHOI 394 - 8172 8862 0 3 214,218,184, 0,273,506, -,-,-, 648562 Satellite W-chromosome 585 chrUn_NT_467004v1 8960 11045 GGXHOI 332 - 8960 11045 0 2 1412,624, 0,1461, -,-, 648563 Satellite W-chromosome 585 chrUn_NT_467004v1 11142 13126 GGXHOI 371 - 11142 13126 0 3 263,1483,176, 0,278,1808, -,-,-, 648564 Satellite W-chromosome 585 chrUn_NT_467005v1 696 1529 (CGAGG)n 541 + 696 1529 0 3 308,197,88, 0,369,745, +,+,+, 648568 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 1530 1949 (GAGGC)n 376 + 1530 1949 0 2 7,42, 0,377, +,+, 648570 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 1949 3556 (CGAGG)n 537 + 1949 3556 0 5 180,179,190,178,732, 0,215,416,637,875, +,+,+,+,+, 648572 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 3601 4431 (CGAGG)n 556 + 3601 4431 0 2 280,524, 0,306, +,+, 648574 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 4540 4983 (CGAGG)n 446 + 4540 4983 0 2 221,193, 0,250, +,+, 648576 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 6118 6424 (CGAGG)n 528 + 6118 6424 0 2 108,23, 0,283, +,+, 648581 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 8408 9041 (CGAGG)n 498 + 8408 9041 0 2 179,426, 0,207, +,+, 648588 Simple_repeat Simple_repeat 585 chrUn_NT_467005v1 12615 13744 (CGAGG)n 519 + 12615 13744 0 3 187,472,429, 0,217,700, +,+,+, 648601 Simple_repeat Simple_repeat 585 chrUn_NT_467006v1 1183 2411 GGXHOI 317 - 1183 2411 0 2 461,744, 0,484, -,-, 648605 Satellite W-chromosome 585 chrUn_NT_467006v1 3645 8862 GGXHOI 400 - 3645 8862 0 10 105,529,147,975,554,933,557,312,571,365, 0,133,678,839,1836,2407,3357,3936,4265,4852, -,-,-,-,-,-,-,-,-,-, 648607 Satellite W-chromosome 585 chrUn_NT_467006v1 8989 12609 GGXHOI 412 - 8989 12609 0 6 848,471,680,146,144,1227, 0,869,1362,2064,2232,2393, -,-,-,-,-,-, 648608 Satellite W-chromosome 585 chrUn_NT_467006v1 12728 13967 GGXHOI 350 - 12728 13967 0 2 581,642, 0,597, -,-, 648609 Satellite W-chromosome 585 chrUn_NT_467009v1 5448 5954 GGXHOI 396 - 5448 5954 0 2 137,346, 0,160, -,-, 648632 Satellite W-chromosome 585 chrUn_NT_467009v1 6422 13980 GGXHOI 379 - 6422 13980 0 12 494,318,863,576,616,1868,437,412,468,431,88,688, 0,537,909,1798,2390,3033,4919,5373,5837,6321,6767,6870, -,-,-,-,-,-,-,-,-,-,-,-, 648633 Satellite W-chromosome 585 chrUn_NT_467010v1 841 1702 (CAAGG)n 477 + 841 1702 0 3 153,448,209, 0,165,652, +,+,+, 648637 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 1883 2623 (CCTTG)n 520 + 1883 2623 0 2 516,54, 0,686, +,+, 648639 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 2879 3370 (CCTTG)n 479 + 2879 3370 0 2 242,223, 0,268, +,+, 648643 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 4120 4716 (CAAGG)n 532 + 4120 4716 0 3 180,221,195, 0,180,401, +,+,+, 648649 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 4741 5164 (CCTTG)n 485 + 4741 5164 0 2 174,223, 0,200, +,+, 648650 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 5828 6453 (CAAGG)n 535 + 5828 6453 0 2 374,225, 0,400, +,+, 648657 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 6634 7374 (CCTTG)n 520 + 6634 7374 0 2 516,54, 0,686, +,+, 648659 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 7630 8121 (CCTTG)n 479 + 7630 8121 0 2 242,223, 0,268, +,+, 648663 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 8871 9467 (CAAGG)n 532 + 8871 9467 0 3 180,221,195, 0,180,401, +,+,+, 648669 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 9492 9915 (CCTTG)n 485 + 9492 9915 0 2 174,223, 0,200, +,+, 648670 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 10572 11221 (CAAGG)n 537 + 10572 11221 0 2 374,258, 0,391, +,+, 648676 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 11269 12113 (CCTTG)n 509 + 11269 12113 0 4 59,334,144,54, 0,108,477,790, +,+,+,+, 648677 Simple_repeat Simple_repeat 585 chrUn_NT_467010v1 12436 12854 (CCTTG)n 393 + 12436 12854 0 2 175,204, 0,214, +,+, 648681 Simple_repeat Simple_repeat 585 chrUn_NT_467011v1 809 1636 GGXHOI 355 - 809 1636 0 2 640,148, 0,679, -,-, 648690 Satellite W-chromosome 585 chrUn_NT_467011v1 1738 2635 GGXHOI 359 - 1738 2635 0 2 707,145, 0,752, -,-, 648691 Satellite W-chromosome 585 chrUn_NT_467011v1 11091 11969 (CCTTG)n 509 + 11091 11969 0 3 250,294,295, 0,276,583, +,+,+, 648703 Simple_repeat Simple_repeat 585 chrUn_NT_467011v1 12305 12670 (CAGGC)n 382 + 12305 12670 0 2 148,26, 0,339, +,+, 648705 Simple_repeat Simple_repeat 585 chrUn_NT_467011v1 12820 13234 (CCTTG)n 536 + 12820 13234 0 2 198,169, 0,245, +,+, 648708 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 1547 1864 (CAGGC)n 532 + 1547 1864 0 2 68,72, 0,245, +,+, 648734 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 2123 2864 (CAAGG)n 626 + 2123 2864 0 2 185,550, 0,191, +,+, 648738 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 3627 4255 (CAAGG)n 632 + 3627 4255 0 2 211,398, 0,230, +,+, 648744 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 4783 6369 (CAAGG)n 633 + 4783 6369 0 3 144,669,373, 0,529,1213, +,+,+, 648748 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 7784 8341 (CAAGG)n 617 + 7784 8341 0 2 183,363, 0,194, +,+, 648758 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 8354 8750 (CAAGG)n 594 + 8354 8750 0 2 160,57, 0,339, +,+, 648760 Simple_repeat Simple_repeat 585 chrUn_NT_467013v1 11705 12534 GGXHOI 400 + 11705 12534 0 2 210,605, 0,224, +,+, 648777 Satellite W-chromosome 585 chrUn_NT_467015v1 3021 6151 GGLTR7-int 401 + 3021 6151 0 4 116,1644,951,277, 0,116,1855,2853, +,+,+,+, 648786 LTR ERV1 585 chrUn_NT_467017v1 6321 6880 G-rich 430 + 6321 6880 0 2 82,449, 0,110, +,+, 648805 Low_complexity Low_complexity 585 chrUn_NT_467018v1 3015 3447 Sat-CR1_GG 124 - 3015 3447 0 2 124,97, 0,335, -,-, 648816 Satellite Satellite 585 chrUn_NT_467019v1 7384 8398 GGXHOI 518 + 7384 8398 0 2 676,139, 0,875, +,+, 648858 Satellite W-chromosome 585 chrUn_NT_467019v1 8475 9499 GGXHOI 452 + 8475 9499 0 4 234,238,160,19, 0,284,536,1005, +,+,+,+, 648860 Satellite W-chromosome 585 chrUn_NT_467019v1 9576 13954 GGXHOI 510 + 9576 13954 0 6 160,193,331,193,917,947, 0,607,1123,1733,2236,3431, +,+,+,+,+,+, 648862 Satellite W-chromosome 585 chrUn_NT_467020v1 3825 7921 GGXHOI 401 + 3825 7921 0 6 451,973,928,934,64,653, 0,471,1464,2409,3358,3443, +,+,+,+,+,+, 648869 Satellite W-chromosome 585 chrUn_NT_467020v1 8547 11187 GGXHOI 371 + 8547 11187 0 3 118,1985,506, 0,129,2134, +,+,+, 648871 Satellite W-chromosome 585 chrUn_NT_467020v1 11304 12761 GGXHOI 371 + 11304 12761 0 3 311,967,139, 0,331,1318, +,+,+, 648872 Satellite W-chromosome 585 chrUn_NT_467020v1 12844 13951 GGXHOI 433 - 12844 13951 0 3 780,64,186, 0,800,921, -,-,-, 648873 Satellite W-chromosome 585 chrUn_NT_467022v1 1252 1355 (C)n 690 + 1252 1355 0 2 23,32, 0,71, +,+, 648884 Simple_repeat Simple_repeat 585 chrUn_NT_467022v1 4021 4305 (CCCCATTGGG)n 411 - 4021 4305 0 2 121,118, 0,166, -,-, 648890 Satellite Satellite 585 chrUn_NT_467022v1 10552 10636 (CCCAC)n 424 + 10552 10636 0 2 41,13, 0,71, +,+, 648907 Simple_repeat Simple_repeat 585 chrUn_NT_467023v1 1851 2466 CR1-H 375 - 1851 2466 0 2 378,199, 0,416, -,-, 648920 LINE CR1 585 chrUn_NT_467023v1 4320 4942 CR1-H 387 - 4320 4942 0 2 378,208, 0,414, -,-, 648923 LINE CR1 585 chrUn_NT_467023v1 6798 7405 CR1-H 381 - 6798 7405 0 2 367,204, 0,403, -,-, 648926 LINE CR1 585 chrUn_NT_467023v1 9251 9872 CR1-H 373 - 9251 9872 0 2 376,210, 0,411, -,-, 648929 LINE CR1 585 chrUn_NT_467023v1 11641 12232 CR1-H 345 - 11641 12232 0 2 373,182, 0,409, -,-, 648932 LINE CR1 585 chrUn_NT_467024v1 901 3993 GGXHOI 373 - 901 3993 0 4 1484,739,406,361, 0,1500,2277,2731, -,-,-,-, 648936 Satellite W-chromosome 585 chrUn_NT_467024v1 4227 5040 GGXHOI 390 - 4227 5040 0 2 138,647, 0,166, -,-, 648937 Satellite W-chromosome 585 chrUn_NT_467024v1 5253 6916 GGXHOI 359 - 5253 6916 0 3 538,751,306, 0,550,1357, -,-,-, 648938 Satellite W-chromosome 585 chrUn_NT_467024v1 10021 11824 GGXHOI 356 - 10021 11824 0 2 533,1250, 0,553, -,-, 648941 Satellite W-chromosome 585 chrUn_NT_467024v1 11920 12393 GGXHOI 337 - 11920 12393 0 2 144,311, 0,162, -,-, 648942 Satellite W-chromosome 585 chrUn_NT_467024v1 13116 13709 GGXHOI 344 - 13116 13709 0 2 213,321, 0,272, -,-, 648944 Satellite W-chromosome 585 chrUn_NT_467025v1 12644 12749 (ACCCCCC)n 256 + 12644 12749 0 2 8,75, 0,30, +,+, 648967 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 1793 2604 (CGAGG)n 534 + 1793 2604 0 3 372,182,188, 0,421,623, +,+,+, 648976 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 4009 5424 (CGAGG)n 536 + 4009 5424 0 3 181,218,773, 0,244,642, +,+,+, 648981 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 5749 6607 (CGAGG)n 547 + 5749 6607 0 2 179,667, 0,191, +,+, 648986 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 6656 7071 (CGAGG)n 539 + 6656 7071 0 2 180,185, 0,230, +,+, 648988 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 9184 10118 (CGAGG)n 503 + 9184 10118 0 3 165,163,377, 0,345,557, +,+,+, 648998 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 10513 11103 (CGAGG)n 536 + 10513 11103 0 2 185,356, 0,234, +,+, 649003 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 11729 12828 (CGAGG)n 505 + 11729 12828 0 3 581,139,182, 0,759,917, +,+,+, 649007 Simple_repeat Simple_repeat 585 chrUn_NT_467026v1 13180 13945 (CGAGG)n 469 + 13180 13945 0 3 177,200,375, 0,177,390, +,+,+, 649012 Simple_repeat Simple_repeat 585 chrUn_NT_467030v1 554 1118 (CAAGG)n 544 + 554 1118 0 3 115,11,84, 0,286,480, +,+,+, 649045 Simple_repeat Simple_repeat 585 chrUn_NT_467030v1 1372 1712 (CAGGC)n 408 + 1372 1712 0 2 101,55, 0,285, +,+, 649050 Simple_repeat Simple_repeat 585 chrUn_NT_467030v1 1676 2388 (CAAGG)n 616 + 1676 2388 0 2 196,383, 0,329, +,+, 649052 Simple_repeat Simple_repeat 585 chrUn_NT_467030v1 2474 2973 (CAAGG)n 630 + 2474 2973 0 2 188,294, 0,205, +,+, 649055 Simple_repeat Simple_repeat 585 chrUn_NT_467030v1 3077 3495 (CAAGG)n 656 + 3077 3495 0 2 176,206, 0,212, +,+, 649057 Simple_repeat Simple_repeat 585 chrUn_NT_467030v1 4507 5312 GGXHOI 385 + 4507 5312 0 2 534,253, 0,552, +,+, 649062 Satellite W-chromosome 585 chrUn_NT_467030v1 6366 7000 GGXHOI 376 + 6366 7000 0 2 223,390, 0,244, +,+, 649065 Satellite W-chromosome 585 chrUn_NT_467030v1 7732 8435 GGXHOI 306 + 7732 8435 0 2 144,537, 0,166, +,+, 649068 Satellite W-chromosome 585 chrUn_NT_467030v1 8535 8992 GGXHOI 278 + 8535 8992 0 2 176,267, 0,190, +,+, 649069 Satellite W-chromosome 585 chrUn_NT_467030v1 11342 13904 GGXHOI 368 + 11342 13904 0 2 1821,721, 0,1841, +,+, 649073 Satellite W-chromosome 585 chrUn_NT_467033v1 5744 6157 A-rich 586 + 5744 6157 0 2 340,38, 0,375, +,+, 649118 Low_complexity Low_complexity 585 chrUn_NT_467034v1 5537 6299 CR1-C2 678 - 5537 6299 0 2 58,407, 0,355, -,-, 649145 LINE CR1 585 chrUn_NT_467034v1 10880 12694 Z-REP 543 - 10880 12694 0 3 304,850,283, 0,389,1531, -,-,-, 649151 Satellite macro 585 chrUn_NT_467035v1 10473 13703 GGLTR7-int 360 + 10473 13703 0 5 104,948,316,922,238, 0,570,1614,2002,2992, +,+,+,+,+, 649164 LTR ERV1 585 chrUn_NT_467037v1 9675 10794 CR1-B2 697 + 9675 10794 0 2 223,893, 0,226, +,+, 649185 LINE CR1 585 chrUn_NT_467038v1 6718 9176 GGLTR7-int 595 + 6718 9176 0 2 338,793, 0,1665, +,+, 649200 LTR ERV1 585 chrUn_NT_467038v1 9188 11607 GGERV10_LTR 848 - 9188 11607 0 2 38,41, 0,2378, -,-, 649203 LTR ERVL 585 chrUn_NT_467038v1 9355 11565 GGLTR10D-int 918 - 9355 11565 0 2 363,1844, 0,366, -,-, 649204 LTR ERVK 585 chrUn_NT_467038v1 12312 12760 (CGAGG)n 534 + 12312 12760 0 2 175,251, 0,197, +,+, 649208 Simple_repeat Simple_repeat 585 chrUn_NT_467039v1 8212 11883 GGXHOI 394 - 8212 11883 0 2 377,3244, 0,427, -,-, 649216 Satellite W-chromosome 585 chrUn_NT_467040v1 10135 12633 GGXHOI 353 + 10135 12633 0 3 412,1919,131, 0,432,2367, +,+,+, 649219 Satellite W-chromosome 585 chrUn_NT_467040v1 12743 13886 GGXHOI 408 + 12743 13886 0 2 402,682, 0,461, +,+, 649220 Satellite W-chromosome 585 chrUn_NT_467041v1 11375 12178 CR1-H 619 - 11375 12178 0 2 195,592, 0,211, -,-, 649232 LINE CR1 585 chrUn_NT_467042v1 681 8456 GGXHOI 554 + 681 8456 0 12 269,187,247,194,868,808,298,111,299,193,243,272, 0,595,1105,1798,2315,3506,4637,5328,5763,6371,6887,7503, +,+,+,+,+,+,+,+,+,+,+,+, 649235 Satellite W-chromosome 585 chrUn_NT_467042v1 8498 10959 GGXHOI 572 + 8498 10959 0 5 495,194,247,186,27, 0,806,1322,1938,2434, +,+,+,+,+, 649248 Satellite W-chromosome 585 chrUn_NT_467042v1 11029 12063 GGXHOI 482 + 11029 12063 0 2 156,519, 0,515, +,+, 649253 Satellite W-chromosome 585 chrUn_NT_467042v1 13192 13903 GGXHOI 594 + 13192 13903 0 2 109,190, 0,521, +,+, 649256 Satellite W-chromosome 585 chrUn_NT_467043v1 754 2094 GGXHOI 342 - 754 2094 0 2 551,773, 0,567, -,-, 649259 Satellite W-chromosome 585 chrUn_NT_467043v1 5352 9410 GGXHOI 382 - 5352 9410 0 3 2115,653,1185, 0,2163,2873, -,-,-, 649264 Satellite W-chromosome 585 chrUn_NT_467043v1 10540 12595 GGXHOI 378 - 10540 12595 0 2 582,1451, 0,604, -,-, 649266 Satellite W-chromosome 585 chrUn_NT_467044v1 9445 12554 GGLTR7-int 414 + 9445 12554 0 4 116,1662,945,240, 0,116,1851,2869, +,+,+,+, 649279 LTR ERV1 585 chrUn_NT_467045v1 5754 12789 Z-REP 837 + 5754 12789 0 2 5283,1621, 0,5414, +,+, 649288 Satellite macro 585 chrUn_NT_467046v1 2089 2932 GGXHOI 381 - 2089 2932 0 2 309,472, 0,371, -,-, 649292 Satellite W-chromosome 585 chrUn_NT_467046v1 3031 3986 GGXHOI 355 - 3031 3986 0 2 506,386, 0,569, -,-, 649293 Satellite W-chromosome 585 chrUn_NT_467046v1 7563 8275 GGXHOI 338 - 7563 8275 0 2 238,412, 0,300, -,-, 649299 Satellite W-chromosome 585 chrUn_NT_467046v1 8573 9084 GGXHOI 345 - 8573 9084 0 2 122,334, 0,177, -,-, 649300 Satellite W-chromosome 585 chrUn_NT_467046v1 9465 10499 GGXHOI 343 - 9465 10499 0 2 313,680, 0,354, -,-, 649301 Satellite W-chromosome 585 chrUn_NT_467046v1 12246 13143 GGXHOI 356 - 12246 13143 0 2 447,389, 0,508, -,-, 649305 Satellite W-chromosome 585 chrUn_NT_467047v1 2580 8888 GGXHOI 417 - 2580 8888 0 5 311,437,3376,1294,781, 0,333,799,4219,5527, -,-,-,-,-, 649309 Satellite W-chromosome 585 chrUn_NT_467047v1 9068 12045 GGXHOI 401 - 9068 12045 0 2 2191,727, 0,2250, -,-, 649310 Satellite W-chromosome 585 chrUn_NT_467047v1 13017 13889 GGXHOI 362 - 13017 13889 0 2 706,137, 0,735, -,-, 649312 Satellite W-chromosome 585 chrUn_NT_467048v1 621 13657 GGXHOI 430 + 621 13657 0 15 1078,184,215,2474,419,242,411,1509,1599,187,1550,187,954,187,1488, 0,1102,1303,1574,4065,4532,4810,5239,6767,8389,8592,10165,10368,11345,11548, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 649314 Satellite W-chromosome 585 chrUn_NT_467050v1 277 851 GGXHOI 305 + 277 851 0 3 260,158,124, 0,277,450, +,+,+, 649324 Satellite W-chromosome 585 chrUn_NT_467050v1 6851 8395 GGXHOI 387 + 6851 8395 0 2 472,1009, 0,535, +,+, 649331 Satellite W-chromosome 585 chrUn_NT_467050v1 9725 11350 GGXHOI 390 + 9725 11350 0 2 1046,516, 0,1109, +,+, 649333 Satellite W-chromosome 585 chrUn_NT_467051v1 686 3669 GGXHOI 352 - 686 3669 0 5 145,540,276,1774,178, 0,164,726,1015,2805, -,-,-,-,-, 649338 Satellite W-chromosome 585 chrUn_NT_467051v1 3762 4709 GGXHOI 286 - 3762 4709 0 3 126,486,276, 0,142,671, -,-,-, 649339 Satellite W-chromosome 585 chrUn_NT_467051v1 4805 6858 GGXHOI 349 - 4805 6858 0 3 229,1295,496, 0,247,1557, -,-,-, 649340 Satellite W-chromosome 585 chrUn_NT_467051v1 6941 11268 GGXHOI 367 - 6941 11268 0 6 382,131,455,691,1961,592, 0,432,580,1050,1758,3735, -,-,-,-,-,-, 649341 Satellite W-chromosome 585 chrUn_NT_467053v1 2098 12875 GGXHOI 549 - 2098 12875 0 14 116,368,330,387,178,113,70,87,138,109,279,200,111,920, 0,1057,2818,3626,4383,4606,5572,5687,7475,8277,8430,9017,9703,9857, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 649355 Satellite W-chromosome 585 chrUn_NT_467054v1 2312 5229 GGXHOI 390 - 2312 5229 0 2 2502,398, 0,2519, -,-, 649370 Satellite W-chromosome 585 chrUn_NT_467054v1 5325 13168 GGXHOI 398 - 5325 13168 0 12 277,540,416,1049,454,441,1001,454,1032,473,396,1017, 0,294,854,1314,2382,2856,3314,4332,4830,5882,6411,6826, -,-,-,-,-,-,-,-,-,-,-,-, 649371 Satellite W-chromosome 585 chrUn_NT_467056v1 10035 11499 GGXHOI 379 + 10035 11499 0 2 998,449, 0,1015, +,+, 649393 Satellite W-chromosome 585 chrUn_NT_467056v1 12014 13816 GGXHOI 370 + 12014 13816 0 2 952,803, 0,999, +,+, 649395 Satellite W-chromosome 585 chrUn_NT_467057v1 220 347 (TCCAC)n 266 + 220 347 0 2 33,54, 0,73, +,+, 649397 Simple_repeat Simple_repeat 585 chrUn_NT_467057v1 11488 11804 (CACTC)n 230 + 11488 11804 0 2 198,83, 0,233, +,+, 649429 Simple_repeat Simple_repeat 585 chrUn_NT_467062v1 4115 5882 Sat-CR1_GG 184 - 4115 5882 0 2 89,79, 0,1688, -,-, 649480 Satellite Satellite 585 chrUn_NT_467062v1 5814 9304 GGXHOI 564 - 5814 9304 0 4 467,346,64,770, 0,1057,1873,2720, -,-,-,-, 649482 Satellite W-chromosome 585 chrUn_NT_467062v1 9610 11455 GGXHOI 544 - 9610 11455 0 2 865,428, 0,1417, -,-, 649489 Satellite W-chromosome 585 chrUn_NT_467062v1 12658 13846 GGXHOI 544 - 12658 13846 0 2 117,319, 0,869, -,-, 649494 Satellite W-chromosome 585 chrUn_NT_467064v1 12278 13257 (GCCTG)n 532 + 12278 13257 0 3 519,218,239, 0,519,740, +,+,+, 649529 Simple_repeat Simple_repeat 585 chrUn_NT_467064v1 13199 13617 (CCTTG)n 460 + 13199 13617 0 2 144,37, 0,381, +,+, 649530 Simple_repeat Simple_repeat 585 chrUn_NT_467066v1 6264 13829 GGXHOI 367 - 6264 13829 0 11 128,455,1667,1005,421,1674,351,491,362,741,64, 0,179,651,2336,3356,3798,5493,5859,6375,6749,7501, -,-,-,-,-,-,-,-,-,-,-, 649544 Satellite W-chromosome 585 chrUn_NT_467067v1 364 853 GGXHOI 344 - 364 853 0 2 179,282, 0,207, -,-, 649546 Satellite W-chromosome 585 chrUn_NT_467067v1 956 1435 GGXHOI 353 - 956 1435 0 2 283,134, 0,345, -,-, 649547 Satellite W-chromosome 585 chrUn_NT_467067v1 1517 2285 GGXHOI 329 - 1517 2285 0 5 126,136,193,80,171, 0,141,293,502,597, -,-,-,-,-, 649548 Satellite W-chromosome 585 chrUn_NT_467067v1 2445 5154 GGXHOI 304 - 2445 5154 0 10 122,266,135,187,543,274,456,238,97,131, 0,133,435,617,846,1427,1712,2186,2436,2578, -,-,-,-,-,-,-,-,-,-, 649549 Satellite W-chromosome 585 chrUn_NT_467067v1 6347 7590 GGXHOI 398 - 6347 7590 0 2 632,595, 0,648, -,-, 649552 Satellite W-chromosome 585 chrUn_NT_467068v1 3040 6367 GGXHOI 344 - 3040 6367 0 7 897,642,276,411,87,417,432, 0,955,1609,1929,2357,2466,2895, -,-,-,-,-,-,-, 649560 Satellite W-chromosome 585 chrUn_NT_467068v1 6454 6969 GGXHOI 383 - 6454 6969 0 2 253,245, 0,270, -,-, 649561 Satellite W-chromosome 585 chrUn_NT_467068v1 7079 8549 GGXHOI 391 - 7079 8549 0 2 1313,143, 0,1327, -,-, 649562 Satellite W-chromosome 585 chrUn_NT_467068v1 8743 13845 GGXHOI 355 - 8743 13845 0 9 1094,110,1400,176,246,219,815,509,294, 0,1107,1260,2701,2891,3193,3424,4287,4808, -,-,-,-,-,-,-,-,-, 649563 Satellite W-chromosome 585 chrUn_NT_467069v1 3611 4057 GGXHOI 345 + 3611 4057 0 2 129,262, 0,184, +,+, 649565 Satellite W-chromosome 585 chrUn_NT_467069v1 4406 5462 GGXHOI 385 + 4406 5462 0 2 150,881, 0,175, +,+, 649566 Satellite W-chromosome 585 chrUn_NT_467069v1 5599 7015 GGXHOI 371 + 5599 7015 0 3 416,799,153, 0,436,1263, +,+,+, 649567 Satellite W-chromosome 585 chrUn_NT_467069v1 7120 7804 GGXHOI 367 + 7120 7804 0 2 452,193, 0,491, +,+, 649568 Satellite W-chromosome 585 chrUn_NT_467069v1 7868 8382 GGXHOI 336 + 7868 8382 0 2 208,283, 0,231, +,+, 649569 Satellite W-chromosome 585 chrUn_NT_467069v1 8752 11395 GGXHOI 364 + 8752 11395 0 6 623,266,175,463,550,379, 0,672,981,1176,1661,2264, +,+,+,+,+,+, 649570 Satellite W-chromosome 585 chrUn_NT_467069v1 11487 13837 GGXHOI 387 + 11487 13837 0 4 137,264,439,1456, 0,149,437,894, +,+,+,+, 649571 Satellite W-chromosome 585 chrUn_NT_467070v1 10056 10544 GGXHOI 405 - 10056 10544 0 2 88,379, 0,109, -,-, 649573 Satellite W-chromosome 585 chrUn_NT_467070v1 12018 13479 GGXHOI 369 - 12018 13479 0 3 538,288,599, 0,555,862, -,-,-, 649576 Satellite W-chromosome 585 chrUn_NT_467071v1 5277 6402 CR1-B2 699 + 5277 6402 0 2 225,897, 0,228, +,+, 649581 LINE CR1 585 chrUn_NT_467072v1 6919 12015 GGXHOI 307 + 6919 12015 0 6 1511,490,455,133,928,1455, 0,1529,2037,2544,2695,3641, +,+,+,+,+,+, 649601 Satellite W-chromosome 585 chrUn_NT_467072v1 12487 13832 GGXHOI 382 + 12487 13832 0 2 688,609, 0,736, +,+, 649602 Satellite W-chromosome 585 chrUn_NT_467073v1 1121 3847 GGXHOI 416 + 1121 3847 0 3 677,1581,404, 0,723,2322, +,+,+, 649604 Satellite W-chromosome 585 chrUn_NT_467074v1 6941 7950 (TTAGGG)n 598 + 6941 7950 0 3 147,32,636, 0,326,373, +,+,+, 649610 Simple_repeat Simple_repeat 585 chrUn_NT_467074v1 8191 10703 (TTAGGG)n 633 + 8191 10703 0 6 470,724,378,194,200,447, 0,501,1251,1629,1853,2065, +,+,+,+,+,+, 649615 Simple_repeat Simple_repeat 585 chrUn_NT_467074v1 11369 11780 (CCCTAA)n 546 + 11369 11780 0 2 213,198, 0,213, +,+, 649618 Simple_repeat Simple_repeat 585 chrUn_NT_467074v1 11882 12459 (CCCTAA)n 670 + 11882 12459 0 2 169,375, 0,202, +,+, 649620 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 4726 5378 (CGAGG)n 645 + 4726 5378 0 3 219,40,181, 0,410,471, +,+,+, 649631 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 5444 5852 (CGAGG)n 628 + 5444 5852 0 2 182,226, 0,182, +,+, 649635 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 5768 6070 (AGGTG)n 474 + 5768 6070 0 2 106,16, 0,286, +,+, 649636 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 6106 6989 (CGAGG)n 635 + 6106 6989 0 3 142,111,409, 0,318,474, +,+,+, 649638 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 7471 8544 (CGAGG)n 636 + 7471 8544 0 2 439,612, 0,461, +,+, 649645 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 8744 9134 (CAAGG)n 494 + 8744 9134 0 2 187,203, 0,187, +,+, 649648 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 9861 11444 (CGAGG)n 677 + 9861 11444 0 5 182,270,60,133,24, 0,213,1184,1244,1559, +,+,+,+,+, 649653 Simple_repeat Simple_repeat 585 chrUn_NT_467075v1 11449 12871 GGXHOI 404 - 11449 12871 0 2 169,1235, 0,187, -,-, 649658 Satellite W-chromosome 585 chrUn_NT_467077v1 2891 3933 GGXHOI 374 - 2891 3933 0 3 206,310,492, 0,219,550, -,-,-, 649671 Satellite W-chromosome 585 chrUn_NT_467077v1 11203 11557 GGXHOI 355 - 11203 11557 0 2 128,199, 0,155, -,-, 649687 Satellite W-chromosome 585 chrUn_NT_467077v1 11755 12541 GGXHOI 435 - 11755 12541 0 2 525,243, 0,543, -,-, 649689 Satellite W-chromosome 585 chrUn_NT_467080v1 4046 12657 GGXHOI 411 - 4046 12657 0 2 5019,3536, 0,5075, -,-, 649702 Satellite W-chromosome 585 chrUn_NT_467081v1 5495 6618 CR1-B2 690 + 5495 6618 0 2 223,897, 0,226, +,+, 649709 LINE CR1 585 chrUn_NT_467081v1 12830 13392 CR1-X 447 + 12830 13392 0 3 168,131,221, 0,168,341, +,+,+, 649721 LINE CR1 585 chrUn_NT_467082v1 692 1545 (CCTTG)n 449 + 692 1545 0 3 185,370,193, 0,246,660, +,+,+, 649726 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 1910 2374 (CAAGG)n 597 + 1910 2374 0 3 46,218,174, 0,46,290, +,+,+, 649729 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 3696 4233 (CAAGG)n 591 + 3696 4233 0 3 46,223,242, 0,46,295, +,+,+, 649736 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 4489 5384 (CAAGG)n 486 + 4489 5384 0 2 402,299, 0,596, +,+, 649739 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 6194 6663 (CAAGG)n 595 + 6194 6663 0 3 46,223,174, 0,46,295, +,+,+, 649743 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 7291 7610 (GCCTG)n 400 + 7291 7610 0 2 98,43, 0,276, +,+, 649747 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 7988 8525 (CAAGG)n 591 + 7988 8525 0 3 46,223,242, 0,46,295, +,+,+, 649751 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 9691 10296 (CCTTG)n 518 + 9691 10296 0 2 228,353, 0,252, +,+, 649755 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 10927 11396 (CAAGG)n 595 + 10927 11396 0 3 46,223,174, 0,46,295, +,+,+, 649761 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 12023 12342 (GCCTG)n 400 + 12023 12342 0 2 98,43, 0,276, +,+, 649766 Simple_repeat Simple_repeat 585 chrUn_NT_467082v1 12719 13253 (CAAGG)n 584 + 12719 13253 0 3 46,223,248, 0,46,286, +,+,+, 649770 Simple_repeat Simple_repeat 585 chrUn_NT_467084v1 2731 6010 GGXHOI 348 - 2731 6010 0 3 206,251,2751, 0,220,528, -,-,-, 649831 Satellite W-chromosome 585 chrUn_NT_467084v1 6149 6571 GGXHOI 292 - 6149 6571 0 2 189,219, 0,203, -,-, 649832 Satellite W-chromosome 585 chrUn_NT_467084v1 7123 8484 GGXHOI 393 - 7123 8484 0 3 424,381,484, 0,456,877, -,-,-, 649834 Satellite W-chromosome 585 chrUn_NT_467084v1 8875 9228 GGXHOI 396 - 8875 9228 0 2 180,152, 0,201, -,-, 649836 Satellite W-chromosome 585 chrUn_NT_467084v1 9419 10887 GGXHOI 419 - 9419 10887 0 3 136,201,1069, 0,177,399, -,-,-, 649837 Satellite W-chromosome 585 chrUn_NT_467084v1 11256 12884 GGXHOI 348 - 11256 12884 0 4 376,270,350,523, 0,414,730,1105, -,-,-,-, 649838 Satellite W-chromosome 585 chrUn_NT_467085v1 10494 11886 GGLTR7-int 317 - 10494 11886 0 3 279,314,102, 0,974,1290, -,-,-, 649847 LTR ERV1 585 chrUn_NT_467085v1 12616 13734 GGERVL-B-int 783 - 12616 13734 0 2 924,194, 0,924, -,-, 649850 LTR ERVL 585 chrUn_NT_467086v1 1241 1669 (CTCTATGGGG)n 469 + 1241 1669 0 3 123,115,120, 0,170,308, +,+,+, 649855 Satellite Satellite 585 chrUn_NT_467086v1 1912 2261 (CTCCG)n 339 + 1912 2261 0 2 188,146, 0,203, +,+, 649858 Simple_repeat Simple_repeat 585 chrUn_NT_467086v1 3185 3441 (CTCTATGGGG)n 423 + 3185 3441 0 2 128,108, 0,148, +,+, 649861 Satellite Satellite 585 chrUn_NT_467086v1 4615 4971 (CTCTATGGGG)n 398 + 4615 4971 0 2 165,63, 0,293, +,+, 649865 Satellite Satellite 585 chrUn_NT_467086v1 5039 5474 (CTCTATGGGG)n 287 + 5039 5474 0 3 131,131,112, 0,163,323, +,+,+, 649868 Satellite Satellite 585 chrUn_NT_467086v1 6361 7245 (CTCTATGGGG)n 365 + 6361 7245 0 5 118,119,152,131,210, 0,163,308,511,674, +,+,+,+,+, 649872 Satellite Satellite 585 chrUn_NT_467086v1 8204 8465 (CTCTATGGGG)n 442 + 8204 8465 0 2 126,121, 0,140, +,+, 649874 Satellite Satellite 585 chrUn_NT_467086v1 11684 12028 (CAGTG)n 240 + 11684 12028 0 2 11,80, 0,264, +,+, 649884 Simple_repeat Simple_repeat 585 chrUn_NT_467086v1 11695 11948 (CTCTATGGGG)n 370 - 11695 11948 0 2 103,27, 0,226, -,-, 649885 Satellite Satellite 585 chrUn_NT_467086v1 12226 12496 (CTCTATGGGG)n 304 + 12226 12496 0 2 128,130, 0,140, +,+, 649888 Satellite Satellite 585 chrUn_NT_467087v1 1682 4038 GGLTR7-int 591 - 1682 4038 0 2 776,257, 0,2099, -,-, 649894 LTR ERV1 585 chrUn_NT_467088v1 1106 2320 Z-REP 540 + 1106 2320 0 2 829,308, 0,906, +,+, 649905 Satellite macro 585 chrUn_NT_467089v1 4736 5359 CR1-H 677 - 4736 5359 0 2 139,478, 0,145, -,-, 649921 LINE CR1 585 chrUn_NT_467089v1 7557 8014 CR1-H 679 - 7557 8014 0 2 163,294, 0,163, -,-, 649925 LINE CR1 585 chrUn_NT_467092v1 2814 3381 CR1-X 449 - 2814 3381 0 3 227,132,172, 0,263,395, -,-,-, 649947 LINE CR1 585 chrUn_NT_467092v1 7284 8411 CR1-B2 676 - 7284 8411 0 2 898,226, 0,901, -,-, 649951 LINE CR1 585 chrUn_NT_467093v1 441 3313 GGXHOI 365 + 441 3313 0 4 956,817,334,682, 0,1003,1839,2190, +,+,+,+, 649955 Satellite W-chromosome 585 chrUn_NT_467093v1 7415 8838 (TTAGGG)n 615 + 7415 8838 0 6 247,171,218,358,42,183, 0,271,442,660,1175,1240, +,+,+,+,+,+, 649960 Simple_repeat Simple_repeat 585 chrUn_NT_467093v1 9589 10554 (TTAGGG)n 627 + 9589 10554 0 3 542,193,176, 0,566,789, +,+,+, 649967 Simple_repeat Simple_repeat 585 chrUn_NT_467093v1 11309 11667 (TTAGGG)n 734 + 11309 11667 0 2 142,37, 0,321, +,+, 649971 Simple_repeat Simple_repeat 585 chrUn_NT_467093v1 11759 12673 (TTAGGG)n 611 + 11759 12673 0 4 193,192,178,262, 0,215,427,652, +,+,+,+, 649974 Simple_repeat Simple_repeat 585 chrUn_NT_467093v1 13227 13747 (TTAGGG)n 624 + 13227 13747 0 2 264,74, 0,446, +,+, 649978 Simple_repeat Simple_repeat 585 chrUn_NT_467096v1 313 835 G-rich 446 + 313 835 0 2 33,428, 0,94, +,+, 649995 Low_complexity Low_complexity 585 chrUn_NT_467097v1 8689 9047 (ACCCCATAGGG)n 354 - 8689 9047 0 2 180,60, 0,298, -,-, 650008 Satellite Satellite 585 chrUn_NT_467099v1 8007 10092 GGLTR7-int 531 - 8007 10092 0 3 267,1626,118, 0,341,1967, -,-,-, 650022 LTR ERV1 585 chrUn_NT_467100v1 1498 2979 (CAAGG)n 579 + 1498 2979 0 6 289,127,67,186,295,42, 0,315,619,711,917,1439, +,+,+,+,+,+, 650032 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 3211 4473 (CAAGG)n 460 + 3211 4473 0 5 218,143,188,171,232, 0,408,609,818,1030, +,+,+,+,+, 650035 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 4846 5199 (CAAGG)n 630 + 4846 5199 0 2 148,29, 0,324, +,+, 650040 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 6251 8454 (CAAGG)n 575 + 6251 8454 0 7 276,381,13,64,371,208,147, 0,304,844,1186,1272,1668,2056, +,+,+,+,+,+,+, 650047 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 8729 9040 (CAGGC)n 484 + 8729 9040 0 2 81,50, 0,261, +,+, 650054 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 9962 11061 (CAAGG)n 584 + 9962 11061 0 4 185,169,76,437, 0,197,547,662, +,+,+,+, 650060 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 11332 12267 (CAAGG)n 596 + 11332 12267 0 4 185,213,82,238, 0,185,398,697, +,+,+,+, 650066 Simple_repeat Simple_repeat 585 chrUn_NT_467100v1 12550 12741 (AGGCA)n 336 + 12550 12741 0 2 61,34, 0,157, +,+, 650072 Simple_repeat Simple_repeat 585 chrUn_NT_467101v1 3515 3939 (GAGTG)n 348 + 3515 3939 0 2 190,193, 0,231, +,+, 650082 Simple_repeat Simple_repeat 585 chrUn_NT_467101v1 5872 7928 GGERVL-B-int 802 + 5872 7928 0 4 232,82,898,662, 0,412,496,1394, +,+,+,+, 650089 LTR ERVL 585 chrUn_NT_467101v1 7924 9284 GGERVL-B-int 818 - 7924 9284 0 4 104,36,725,493, 0,104,140,867, -,-,-,-, 650092 LTR ERVL 585 chrUn_NT_467101v1 9285 10481 GGERV30_LTR 710 + 9285 10481 0 2 904,292, 0,904, +,+, 650093 LTR ERVL 585 chrUn_NT_467101v1 10638 11709 (GAGTG)n 324 + 10638 11709 0 5 193,118,342,100,73, 0,205,335,713,998, +,+,+,+,+, 650095 Simple_repeat Simple_repeat 585 chrUn_NT_467104v1 2338 4721 GGLTR7-int 582 - 2338 4721 0 2 789,330, 0,2053, -,-, 650112 LTR ERV1 585 chrUn_NT_467105v1 1001 1291 (CTCTATGGGG)n 644 - 1001 1291 0 2 123,124, 0,166, -,-, 650129 Satellite Satellite 585 chrUn_NT_467105v1 1913 2601 (CTCTATGGGG)n 543 + 1913 2601 0 3 376,153,154, 0,381,534, +,+,+, 650134 Satellite Satellite 585 chrUn_NT_467105v1 10821 11012 (CAGTG)n 238 + 10821 11012 0 2 10,43, 0,148, +,+, 650147 Simple_repeat Simple_repeat 585 chrUn_NT_467105v1 11476 11651 (CAGTG)n 260 + 11476 11651 0 2 7,46, 0,129, +,+, 650150 Simple_repeat Simple_repeat 585 chrUn_NT_467105v1 11722 13043 (GCCCCACAGCT)n 246 - 11722 13043 0 8 225,193,120,116,103,122,116,103, 0,286,513,646,805,926,1059,1218, -,-,-,-,-,-,-,-, 650152 Satellite Satellite 585 chrUn_NT_467106v1 9804 10815 GGXHOI 295 - 9804 10815 0 2 854,101, 0,910, -,-, 650157 Satellite W-chromosome 585 chrUn_NT_467106v1 10954 13779 GGXHOI 403 - 10954 13779 0 2 1692,1122, 0,1703, -,-, 650158 Satellite W-chromosome 585 chrUn_NT_467107v1 3801 4098 CR1-X2 469 - 3801 4098 0 2 234,63, 0,234, -,-, 650161 LINE CR1 585 chrUn_NT_467110v1 4258 5032 CR1-B2 712 + 4258 5032 0 2 149,625, 0,149, +,+, 650184 LINE CR1 585 chrUn_NT_467111v1 2837 5468 GGXHOI 379 + 2837 5468 0 2 563,2050, 0,581, +,+, 650196 Satellite W-chromosome 585 chrUn_NT_467111v1 5772 12091 GGXHOI 381 + 5772 12091 0 4 3753,840,1541,98, 0,3768,4625,6221, +,+,+,+, 650197 Satellite W-chromosome 585 chrUn_NT_467112v1 309 9634 CR1-F 541 + 309 9634 0 28 203,204,204,155,199,174,202,202,204,155,198,184,198,203,203,204,155,191,178,176,188,197,203,202,204,155,198,194, 0,245,491,961,1406,1876,2092,2336,2580,3051,3496,3739,3965,4450,4695,4940,5407,5851,6319,6541,6762,6990,7484,7729,7973,8443,8888,9131, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 650201 LINE CR1 585 chrUn_NT_467112v1 9677 11539 CR1-F 518 + 9677 11539 0 6 203,204,204,155,199,212, 0,245,491,961,1406,1650, +,+,+,+,+,+, 650214 LINE CR1 585 chrUn_NT_467112v1 11581 13437 CR1-F 494 + 11581 13437 0 6 203,204,199,154,202,209, 0,245,491,956,1400,1647, +,+,+,+,+,+, 650217 LINE CR1 585 chrUn_NT_467112v1 13481 13770 CR1-F 565 + 13481 13770 0 2 199,46, 0,243, +,+, 650220 LINE CR1 585 chrUn_NT_467114v1 3364 11992 GGXHOI 380 + 3364 11992 0 8 491,1482,1874,344,2421,1569,124,117, 0,531,2029,3914,4295,6727,8335,8511, +,+,+,+,+,+,+,+, 650231 Satellite W-chromosome 585 chrUn_NT_467114v1 12246 13768 GGXHOI 419 + 12246 13768 0 2 284,1181, 0,341, +,+, 650232 Satellite W-chromosome 585 chrUn_NT_467115v1 121 6356 Sat-CR1_GG 154 - 121 6356 0 3 549,33,12, 0,2456,6223, -,-,-, 650234 Satellite Satellite 585 chrUn_NT_467115v1 2610 6344 GGXHOI 560 - 2610 6344 0 2 2523,892, 0,2842, -,-, 650236 Satellite W-chromosome 585 chrUn_NT_467115v1 7666 9103 GGXHOI 502 - 7666 9103 0 2 428,994, 0,443, -,-, 650239 Satellite W-chromosome 585 chrUn_NT_467115v1 11410 13748 GGXHOI 572 - 11410 13748 0 5 285,321,29,155,187, 0,1030,1694,1761,2151, -,-,-,-,-, 650245 Satellite W-chromosome 585 chrUn_NT_467116v1 1463 2107 GGERVK10-int 314 + 1463 2107 0 3 106,133,81, 0,280,563, +,+,+, 650250 LTR ERVK 585 chrUn_NT_467116v1 10689 13117 GGLTR3F1 760 - 10689 13117 0 2 1931,494, 0,1934, -,-, 650256 LTR ERVL 585 chrUn_NT_467117v1 10439 10747 CR1-X 515 - 10439 10747 0 3 50,77,171, 0,60,137, -,-,-, 650268 LINE CR1 585 chrUn_NT_467118v1 9243 9490 CR1-X 505 + 9243 9490 0 2 170,77, 0,170, +,+, 650279 LINE CR1 585 chrUn_NT_467119v1 823 7556 GGXHOI 420 - 823 7556 0 7 615,403,806,2572,1059,1008,143, 0,626,1041,1863,4476,5558,6590, -,-,-,-,-,-,-, 650283 Satellite W-chromosome 585 chrUn_NT_467119v1 7678 13750 GGXHOI 394 - 7678 13750 0 4 2809,547,1444,1197, 0,2832,3401,4875, -,-,-,-, 650284 Satellite W-chromosome 585 chrUn_NT_467120v1 1089 1691 CR1-H 360 + 1089 1691 0 2 203,364, 0,238, +,+, 650286 LINE CR1 585 chrUn_NT_467120v1 3534 4150 CR1-H 389 + 3534 4150 0 2 204,376, 0,240, +,+, 650289 LINE CR1 585 chrUn_NT_467120v1 6279 10016 CR1-C2 475 - 6279 10016 0 2 74,88, 0,3649, -,-, 650292 LINE CR1 585 chrUn_NT_467121v1 2846 3864 GGXHOI 369 + 2846 3864 0 2 440,561, 0,457, +,+, 650306 Satellite W-chromosome 585 chrUn_NT_467121v1 5147 6087 GGXHOI 374 + 5147 6087 0 2 439,482, 0,458, +,+, 650309 Satellite W-chromosome 585 chrUn_NT_467121v1 6272 7046 GGXHOI 342 + 6272 7046 0 2 383,375, 0,399, +,+, 650310 Satellite W-chromosome 585 chrUn_NT_467121v1 11300 13750 GGXHOI 423 - 11300 13750 0 3 845,146,1436, 0,857,1014, -,-,-, 650317 Satellite W-chromosome 585 chrUn_NT_467122v1 914 3103 GGLTR10D-int 841 - 914 3103 0 2 362,1824, 0,365, -,-, 650319 LTR ERVK 585 chrUn_NT_467122v1 3142 3828 (CGAGG)n 570 + 3142 3828 0 3 313,174,162, 0,334,524, +,+,+, 650321 Simple_repeat Simple_repeat 585 chrUn_NT_467122v1 4025 4755 (CGAGG)n 484 + 4025 4755 0 2 190,520, 0,210, +,+, 650323 Simple_repeat Simple_repeat 585 chrUn_NT_467122v1 5640 6344 (CGAGG)n 524 + 5640 6344 0 2 332,372, 0,332, +,+, 650327 Simple_repeat Simple_repeat 585 chrUn_NT_467122v1 6636 7018 (CGAGG)n 530 + 6636 7018 0 2 183,199, 0,183, +,+, 650329 Simple_repeat Simple_repeat 585 chrUn_NT_467122v1 8173 9552 (CGAGG)n 517 + 8173 9552 0 3 776,345,184, 0,805,1195, +,+,+, 650337 Simple_repeat Simple_repeat 585 chrUn_NT_467122v1 9810 10395 (CGAGG)n 562 + 9810 10395 0 2 179,351, 0,234, +,+, 650340 Simple_repeat Simple_repeat 585 chrUn_NT_467122v1 10826 12506 (CGAGG)n 536 + 10826 12506 0 5 112,697,32,262,176, 0,290,1151,1205,1504, +,+,+,+,+, 650341 Simple_repeat Simple_repeat 585 chrUn_NT_467123v1 595 4238 GGXHOI 600 - 595 4238 0 4 317,412,457,565, 0,986,2069,3078, -,-,-,-, 650351 Satellite W-chromosome 585 chrUn_NT_467123v1 4959 11030 GGXHOI 594 - 4959 11030 0 11 247,148,189,365,54,362,435,276,25,51,421, 0,258,961,1166,2215,2285,3338,4455,4742,5557,5650, -,-,-,-,-,-,-,-,-,-,-, 650356 Satellite W-chromosome 585 chrUn_NT_467123v1 11072 13743 GGXHOI 594 - 11072 13743 0 4 1030,50,157,87, 0,1703,1795,2584, -,-,-,-, 650363 Satellite W-chromosome 585 chrUn_NT_467127v1 3390 4848 GGXHOI 538 - 3390 4848 0 2 1028,209, 0,1249, -,-, 650398 Satellite W-chromosome 585 chrUn_NT_467127v1 9518 11327 GGXHOI 526 - 9518 11327 0 2 879,869, 0,940, -,-, 650403 Satellite W-chromosome 585 chrUn_NT_467128v1 1569 1994 CR1-X 542 - 1569 1994 0 2 224,201, 0,224, -,-, 650408 LINE CR1 585 chrUn_NT_467128v1 4937 5362 CR1-X 542 - 4937 5362 0 2 224,201, 0,224, -,-, 650412 LINE CR1 585 chrUn_NT_467128v1 8352 8727 CR1-X 572 - 8352 8727 0 2 177,198, 0,177, -,-, 650416 LINE CR1 585 chrUn_NT_467128v1 11646 12005 CR1-X 472 - 11646 12005 0 2 176,183, 0,176, -,-, 650421 LINE CR1 585 chrUn_NT_467129v1 4310 4997 GGXHOI 359 - 4310 4997 0 3 290,158,154, 0,353,533, -,-,-, 650429 Satellite W-chromosome 585 chrUn_NT_467129v1 5022 11896 GGXHOI 353 - 5022 11896 0 8 197,1152,910,310,1187,188,1540,1051, 0,235,1449,2421,2783,4021,4267,5823, -,-,-,-,-,-,-,-, 650431 Satellite W-chromosome 585 chrUn_NT_467129v1 11992 13141 GGXHOI 349 - 11992 13141 0 2 386,715, 0,434, -,-, 650432 Satellite W-chromosome 585 chrUn_NT_467130v1 2105 4233 GGXHOI 377 + 2105 4233 0 2 1051,1014, 0,1114, +,+, 650436 Satellite W-chromosome 585 chrUn_NT_467130v1 6924 7871 GGXHOI 360 + 6924 7871 0 2 373,511, 0,436, +,+, 650440 Satellite W-chromosome 585 chrUn_NT_467130v1 8617 11159 GGXHOI 368 + 8617 11159 0 5 268,849,588,201,557, 0,285,1151,1765,1985, +,+,+,+,+, 650442 Satellite W-chromosome 585 chrUn_NT_467130v1 11339 12961 GGXHOI 392 + 11339 12961 0 2 1044,515, 0,1107, +,+, 650443 Satellite W-chromosome 585 chrUn_NT_467132v1 1250 1592 (CAAGG)n 590 + 1250 1592 0 2 89,73, 0,269, +,+, 650450 Simple_repeat Simple_repeat 585 chrUn_NT_467132v1 2196 2594 (CAAGG)n 534 + 2196 2594 0 2 178,205, 0,193, +,+, 650454 Simple_repeat Simple_repeat 585 chrUn_NT_467132v1 3029 3493 (CAGGC)n 570 + 3029 3493 0 2 175,278, 0,186, +,+, 650458 Simple_repeat Simple_repeat 585 chrUn_NT_467133v1 4762 6167 GGLTR7-int 245 - 4762 6167 0 3 282,317,100, 0,986,1305, -,-,-, 650473 LTR ERV1 585 chrUn_NT_467133v1 6917 9926 GGERVL-B-int 723 - 6917 9926 0 3 2273,54,315, 0,2274,2694, -,-,-, 650476 LTR ERVL 585 chrUn_NT_467133v1 12430 13456 GGLTR7A 704 - 12430 13456 0 2 580,445, 0,581, -,-, 650480 LTR ERV1 585 chrUn_NT_467134v1 6585 6893 CR1-X 493 + 6585 6893 0 3 170,78,57, 0,170,251, +,+,+, 650484 LINE CR1 585 chrUn_NT_467135v1 1744 2784 GGXHOI 582 - 1744 2784 0 2 492,360, 0,680, -,-, 650490 Satellite W-chromosome 585 chrUn_NT_467135v1 3212 5675 GGXHOI 594 - 3212 5675 0 2 2122,70, 0,2393, -,-, 650493 Satellite W-chromosome 585 chrUn_NT_467135v1 5985 7485 GGXHOI 554 - 5985 7485 0 2 1075,237, 0,1263, -,-, 650496 Satellite W-chromosome 585 chrUn_NT_467135v1 7944 10174 GGXHOI 578 - 7944 10174 0 2 861,1358, 0,872, -,-, 650499 Satellite W-chromosome 585 chrUn_NT_467135v1 10486 13355 GGXHOI 497 - 10486 13355 0 3 1809,83,946, 0,1821,1923, -,-,-, 650501 Satellite W-chromosome 585 chrUn_NT_467136v1 8645 9663 (ACCCCATAGGG)n 210 + 8645 9663 0 5 110,218,148,150,215, 0,159,377,537,803, +,+,+,+,+, 650510 Satellite Satellite 585 chrUn_NT_467137v1 1347 1770 GGXHOI 286 - 1347 1770 0 2 253,156, 0,267, -,-, 650515 Satellite W-chromosome 585 chrUn_NT_467137v1 1903 2309 GGXHOI 341 - 1903 2309 0 2 126,220, 0,186, -,-, 650516 Satellite W-chromosome 585 chrUn_NT_467137v1 2389 3019 GGXHOI 343 - 2389 3019 0 3 176,137,249, 0,223,381, -,-,-, 650517 Satellite W-chromosome 585 chrUn_NT_467138v1 1130 2181 GGXHOI 389 + 1130 2181 0 2 472,516, 0,535, +,+, 650529 Satellite W-chromosome 585 chrUn_NT_467138v1 2280 3331 GGXHOI 392 + 2280 3331 0 2 472,516, 0,535, +,+, 650530 Satellite W-chromosome 585 chrUn_NT_467138v1 3430 4481 GGXHOI 392 + 3430 4481 0 2 472,516, 0,535, +,+, 650531 Satellite W-chromosome 585 chrUn_NT_467138v1 4580 6767 GGXHOI 386 + 4580 6767 0 3 472,1073,516, 0,535,1671, +,+,+, 650532 Satellite W-chromosome 585 chrUn_NT_467138v1 6866 7914 GGXHOI 388 + 6866 7914 0 2 471,514, 0,534, +,+, 650533 Satellite W-chromosome 585 chrUn_NT_467139v1 5281 7605 CR1-F 842 - 5281 7605 0 3 464,707,1152, 0,465,1172, -,-,-, 650549 LINE CR1 585 chrUn_NT_467139v1 9596 13707 CR1-D2 503 - 9596 13707 0 2 575,123, 0,3988, -,-, 650550 LINE CR1 585 chrUn_NT_467139v1 10861 13610 CR1-D 576 - 10861 13610 0 2 2306,304, 0,2445, -,-, 650551 LINE CR1 585 chrUn_NT_467140v1 10988 13699 GGXHOI 401 - 10988 13699 0 5 1703,231,178,278,207, 0,1721,1969,2179,2504, -,-,-,-,-, 650555 Satellite W-chromosome 585 chrUn_NT_467141v1 1056 2033 GGXHOI 431 - 1056 2033 0 3 479,257,211, 0,490,766, -,-,-, 650559 Satellite W-chromosome 585 chrUn_NT_467141v1 3311 4141 GGXHOI 443 - 3311 4141 0 3 236,82,173, 0,285,657, -,-,-, 650562 Satellite W-chromosome 585 chrUn_NT_467141v1 4714 5292 GGXHOI 484 - 4714 5292 0 2 20,194, 0,384, -,-, 650565 Satellite W-chromosome 585 chrUn_NT_467141v1 5370 6402 GGXHOI 486 - 5370 6402 0 2 170,578, 0,454, -,-, 650567 Satellite W-chromosome 585 chrUn_NT_467141v1 6484 8705 GGXHOI 508 - 6484 8705 0 3 197,259,1150, 0,431,1071, -,-,-, 650569 Satellite W-chromosome 585 chrUn_NT_467141v1 8775 9882 GGXHOI 446 - 8775 9882 0 2 469,575, 0,532, -,-, 650572 Satellite W-chromosome 585 chrUn_NT_467141v1 10192 10931 GGXHOI 333 - 10192 10931 0 3 272,238,153, 0,303,586, -,-,-, 650574 Satellite W-chromosome 585 chrUn_NT_467141v1 10997 12079 GGXHOI 556 - 10997 12079 0 2 542,203, 0,879, -,-, 650575 Satellite W-chromosome 585 chrUn_NT_467141v1 12689 13268 GGXHOI 534 - 12689 13268 0 2 21,225, 0,354, -,-, 650578 Satellite W-chromosome 585 chrUn_NT_467141v1 13337 13705 GGXHOI 552 - 13337 13705 0 2 33,58, 0,310, -,-, 650580 Satellite W-chromosome 585 chrUn_NT_467142v1 3257 4007 GGXHOI 370 - 3257 4007 0 5 118,126,194,128,110, 0,134,282,495,640, -,-,-,-,-, 650583 Satellite W-chromosome 585 chrUn_NT_467142v1 4084 4892 GGXHOI 357 - 4084 4892 0 2 590,173, 0,635, -,-, 650584 Satellite W-chromosome 585 chrUn_NT_467142v1 4970 6529 GGXHOI 338 - 4970 6529 0 6 170,403,123,282,124,365, 0,191,615,749,1057,1194, -,-,-,-,-,-, 650585 Satellite W-chromosome 585 chrUn_NT_467142v1 6652 7501 GGXHOI 384 - 6652 7501 0 2 696,136, 0,713, -,-, 650586 Satellite W-chromosome 585 chrUn_NT_467142v1 7636 13704 GGXHOI 353 - 7636 13704 0 10 182,134,961,1165,276,117,1962,463,405,118, 0,200,370,1348,2547,2836,2978,4984,5500,5950, -,-,-,-,-,-,-,-,-,-, 650587 Satellite W-chromosome 585 chrUn_NT_467143v1 1659 2115 GGXHOI 429 - 1659 2115 0 2 315,123, 0,333, -,-, 650591 Satellite W-chromosome 585 chrUn_NT_467143v1 2337 2946 GGXHOI 351 - 2337 2946 0 3 128,230,185, 0,147,424, -,-,-, 650592 Satellite W-chromosome 585 chrUn_NT_467143v1 3028 6574 GGXHOI 370 - 3028 6574 0 14 169,121,281,351,603,136,163,251,115,186,166,126,160,359, 0,184,327,629,1011,1665,1844,2020,2288,2422,2623,2839,2983,3187, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 650593 Satellite W-chromosome 585 chrUn_NT_467143v1 6689 7499 GGXHOI 383 - 6689 7499 0 3 157,371,212, 0,211,598, -,-,-, 650594 Satellite W-chromosome 585 chrUn_NT_467143v1 7576 10272 GGXHOI 357 - 7576 10272 0 7 242,261,328,745,286,141,517, 0,261,555,927,1691,1993,2179, -,-,-,-,-,-,-, 650595 Satellite W-chromosome 585 chrUn_NT_467143v1 10877 12084 GGXHOI 398 - 10877 12084 0 2 894,292, 0,915, -,-, 650597 Satellite W-chromosome 585 chrUn_NT_467143v1 12698 13698 GGXHOI 374 - 12698 13698 0 2 782,205, 0,795, -,-, 650600 Satellite W-chromosome 585 chrUn_NT_467144v1 680 4561 Sat-CR1_GG 205 - 680 4561 0 4 863,701,927,701, 0,1201,1915,3180, -,-,-,-, 650603 Satellite Satellite 585 chrUn_NT_467144v1 4699 6539 Sat-CR1_GG 212 - 4699 6539 0 2 803,699, 0,1141, -,-, 650607 Satellite Satellite 585 chrUn_NT_467144v1 6596 8517 Sat-CR1_GG 218 - 6596 8517 0 2 883,701, 0,1220, -,-, 650610 Satellite Satellite 585 chrUn_NT_467145v1 403 1513 GGXHOI 351 - 403 1513 0 2 127,960, 0,150, -,-, 650624 Satellite W-chromosome 585 chrUn_NT_467145v1 1874 2914 GGXHOI 364 - 1874 2914 0 3 336,128,513, 0,381,527, -,-,-, 650626 Satellite W-chromosome 585 chrUn_NT_467145v1 3019 3917 GGXHOI 345 - 3019 3917 0 3 359,378,132, 0,372,766, -,-,-, 650627 Satellite W-chromosome 585 chrUn_NT_467145v1 5994 6715 GGXHOI 393 - 5994 6715 0 3 311,98,276, 0,327,445, -,-,-, 650629 Satellite W-chromosome 585 chrUn_NT_467145v1 6807 9988 GGXHOI 359 - 6807 9988 0 5 131,217,93,1353,1269, 0,171,401,512,1912, -,-,-,-,-, 650630 Satellite W-chromosome 585 chrUn_NT_467145v1 10073 13707 GGXHOI 382 - 10073 13707 0 4 1051,413,1402,682, 0,1071,1531,2952, -,-,-,-, 650631 Satellite W-chromosome 585 chrUn_NT_467147v1 8695 13137 GGXHOI 422 + 8695 13137 0 3 189,3477,743, 0,205,3699, +,+,+, 650640 Satellite W-chromosome 585 chrUn_NT_467148v1 12781 13690 GGLTR7-int 418 + 12781 13690 0 2 102,348, 0,561, +,+, 650655 LTR ERV1 585 chrUn_NT_467153v1 791 1878 GGXHOI 330 + 791 1878 0 2 364,686, 0,401, +,+, 650772 Satellite W-chromosome 585 chrUn_NT_467153v1 4009 10269 GGXHOI 378 + 4009 10269 0 2 4508,1729, 0,4531, +,+, 650775 Satellite W-chromosome 585 chrUn_NT_467154v1 182 1344 CR1-F 797 + 182 1344 0 2 342,295, 0,867, +,+, 650779 LINE CR1 585 chrUn_NT_467154v1 9277 9782 GGLTR3F2 594 + 9277 9782 0 2 227,227, 0,278, +,+, 650786 LTR ERVL 585 chrUn_NT_467155v1 6879 7510 GGERVK10-int 315 + 6879 7510 0 3 105,140,82, 0,270,549, +,+,+, 650803 LTR ERVK 585 chrUn_NT_467156v1 2876 4620 GGERVL-A-int 735 + 2876 4620 0 2 452,1291, 0,453, +,+, 650810 LTR ERVL 585 chrUn_NT_467158v1 862 1435 CR1-C 560 - 862 1435 0 2 387,186, 0,387, -,-, 650826 LINE CR1 585 chrUn_NT_467158v1 2169 6084 CR1-C 592 - 2169 6084 0 5 40,467,294,399,187, 0,255,1182,3329,3728, -,-,-,-,-, 650830 LINE CR1 585 chrUn_NT_467158v1 6992 10909 CR1-C 592 - 6992 10909 0 5 40,470,294,399,186, 0,257,1189,3332,3731, -,-,-,-,-, 650838 LINE CR1 585 chrUn_NT_467158v1 11717 13071 CR1-C2 551 - 11717 13071 0 4 192,157,225,291, 0,192,380,1063, -,-,-,-, 650844 LINE CR1 585 chrUn_NT_467159v1 573 715 CR1-G 570 - 573 715 0 2 45,83, 0,59, -,-, 650848 LINE CR1 585 chrUn_NT_467160v1 9781 11831 GGLTR7-int 651 - 9781 11831 0 3 33,74,1312, 0,34,738, -,-,-, 650867 LTR ERV1 585 chrUn_NT_467161v1 1853 2213 (CAAGG)n 487 + 1853 2213 0 2 154,206, 0,154, +,+, 650870 Simple_repeat Simple_repeat 585 chrUn_NT_467161v1 3775 4153 (CAAGG)n 616 + 3775 4153 0 2 173,205, 0,173, +,+, 650882 Simple_repeat Simple_repeat 585 chrUn_NT_467161v1 4125 4492 (CAGGC)n 498 + 4125 4492 0 2 188,161, 0,206, +,+, 650883 Simple_repeat Simple_repeat 585 chrUn_NT_467162v1 1496 3336 GGXHOI 391 + 1496 3336 0 3 561,496,722, 0,600,1118, +,+,+, 650906 Satellite W-chromosome 585 chrUn_NT_467162v1 3423 5339 GGXHOI 409 + 3423 5339 0 3 625,497,732, 0,666,1184, +,+,+, 650908 Satellite W-chromosome 585 chrUn_NT_467162v1 5427 7348 GGXHOI 401 + 5427 7348 0 2 625,1251, 0,670, +,+, 650910 Satellite W-chromosome 585 chrUn_NT_467162v1 7436 9323 GGXHOI 395 + 7436 9323 0 2 625,1228, 0,659, +,+, 650912 Satellite W-chromosome 585 chrUn_NT_467162v1 9411 11316 GGXHOI 403 + 9411 11316 0 3 625,498,728, 0,662,1177, +,+,+, 650914 Satellite W-chromosome 585 chrUn_NT_467162v1 11401 12208 GGXHOI 383 + 11401 12208 0 2 620,151, 0,656, +,+, 650916 Satellite W-chromosome 585 chrUn_NT_467163v1 5726 7424 GGXHOI 357 - 5726 7424 0 4 343,396,514,390, 0,361,771,1308, -,-,-,-, 650923 Satellite W-chromosome 585 chrUn_NT_467163v1 7578 10502 GGXHOI 384 - 7578 10502 0 3 408,1061,1422, 0,423,1502, -,-,-, 650924 Satellite W-chromosome 585 chrUn_NT_467163v1 10788 13625 GGXHOI 380 - 10788 13625 0 4 1039,464,747,528, 0,1051,1527,2309, -,-,-,-, 650925 Satellite W-chromosome 585 chrUn_NT_467164v1 4346 7837 GGERV20_I-int 941 - 4346 7837 0 3 220,2023,931, 0,220,2560, -,-,-, 650929 LTR ERVL 585 chrUn_NT_467165v1 5573 7983 GGLTR3F1 753 + 5573 7983 0 2 493,1915, 0,495, +,+, 650938 LTR ERVL 585 chrUn_NT_467166v1 7612 9521 GGXHOI 378 - 7612 9521 0 2 424,1468, 0,441, -,-, 650943 Satellite W-chromosome 585 chrUn_NT_467166v1 9688 13611 GGXHOI 337 - 9688 13611 0 6 219,126,1333,742,759,639, 0,231,402,1751,2510,3284, -,-,-,-,-,-, 650944 Satellite W-chromosome 585 chrUn_NT_467167v1 3189 10778 Z-REP 849 + 3189 10778 0 2 6548,1014, 0,6575, +,+, 650948 Satellite macro 585 chrUn_NT_467168v1 4122 4617 (GCCTG)n 508 + 4122 4617 0 2 106,205, 0,290, +,+, 650961 Simple_repeat Simple_repeat 585 chrUn_NT_467168v1 7999 10489 GGERVL-B-int 791 + 7999 10489 0 3 317,1259,914, 0,317,1576, +,+,+, 650974 LTR ERVL 585 chrUn_NT_467168v1 11353 12623 GGLTR7-int 312 + 11353 12623 0 2 236,280, 0,990, +,+, 650976 LTR ERV1 585 chrUn_NT_467169v1 134 1044 GGXHOI 352 - 134 1044 0 2 520,372, 0,538, -,-, 650981 Satellite W-chromosome 585 chrUn_NT_467169v1 1389 3408 GGXHOI 352 - 1389 3408 0 4 410,764,319,408, 0,439,1231,1611, -,-,-,-, 650983 Satellite W-chromosome 585 chrUn_NT_467169v1 9674 10829 GGXHOI 355 - 9674 10829 0 2 219,910, 0,245, -,-, 650997 Satellite W-chromosome 585 chrUn_NT_467169v1 10891 13444 GGXHOI 319 - 10891 13444 0 6 484,520,98,531,595,162, 0,534,1078,1191,1749,2391, -,-,-,-,-,-, 650999 Satellite W-chromosome 585 chrUn_NT_467170v1 10836 11991 GGXHOI 448 - 10836 11991 0 2 703,415, 0,740, -,-, 651002 Satellite W-chromosome 585 chrUn_NT_467170v1 12060 13632 GGXHOI 419 - 12060 13632 0 2 1112,435, 0,1137, -,-, 651003 Satellite W-chromosome 585 chrUn_NT_467171v1 1961 4065 GGXHOI 368 - 1961 4065 0 3 135,419,800, 0,868,1304, -,-,-, 651008 Satellite W-chromosome 585 chrUn_NT_467171v1 4099 5834 GGXHOI 386 - 4099 5834 0 4 690,173,267,494, 0,726,953,1241, -,-,-,-, 651012 Satellite W-chromosome 585 chrUn_NT_467171v1 9028 10396 GGXHOI 385 - 9028 10396 0 2 713,623, 0,745, -,-, 651020 Satellite W-chromosome 585 chrUn_NT_467172v1 7007 8470 GGXHOI 537 - 7007 8470 0 2 1042,379, 0,1084, -,-, 651036 Satellite W-chromosome 585 chrUn_NT_467172v1 10065 11516 GGXHOI 534 - 10065 11516 0 2 1030,379, 0,1072, -,-, 651038 Satellite W-chromosome 585 chrUn_NT_467173v1 5015 8158 GGXHOI 355 - 5015 8158 0 6 830,739,118,555,280,423, 0,879,1675,1836,2407,2720, -,-,-,-,-,-, 651042 Satellite W-chromosome 585 chrUn_NT_467173v1 8771 9078 (TTAGGG)n 804 + 8771 9078 0 2 74,56, 0,251, +,+, 651045 Simple_repeat Simple_repeat 585 chrUn_NT_467173v1 9724 11177 (TTAGGG)n 569 + 9724 11177 0 4 338,532,173,183, 0,531,1082,1270, +,+,+,+, 651050 Simple_repeat Simple_repeat 585 chrUn_NT_467173v1 11148 11466 (TTAGGC)n 422 + 11148 11466 0 2 107,35, 0,283, +,+, 651052 Simple_repeat Simple_repeat 585 chrUn_NT_467173v1 11768 12302 (TTAGGG)n 581 + 11768 12302 0 2 187,314, 0,220, +,+, 651056 Simple_repeat Simple_repeat 585 chrUn_NT_467174v1 1572 13626 GGXHOI 383 - 1572 13626 0 5 1250,3191,1507,2534,3468, 0,1275,4507,6039,8586, -,-,-,-,-, 651062 Satellite W-chromosome 585 chrUn_NT_467177v1 3687 5454 GGXHOI 257 - 3687 5454 0 2 1594,147, 0,1620, -,-, 651071 Satellite W-chromosome 585 chrUn_NT_467177v1 5548 13615 GGXHOI 379 - 5548 13615 0 5 1672,2237,187,1773,2130, 0,1690,3943,4147,5937, -,-,-,-,-, 651072 Satellite W-chromosome 585 chrUn_NT_467179v1 4943 6064 CR1-B2 700 - 4943 6064 0 2 893,225, 0,896, -,-, 651118 LINE CR1 585 chrUn_NT_467179v1 12935 13493 CR1-X 405 + 12935 13493 0 3 166,122,219, 0,177,339, +,+,+, 651122 LINE CR1 585 chrUn_NT_467180v1 875 1423 Sat-CR1_GG 172 - 875 1423 0 2 287,101, 0,447, -,-, 651127 Satellite Satellite 585 chrUn_NT_467180v1 2391 2706 GGXHOI 304 . 2391 2706 0 2 154,142, 0,173, +,-, 651131 Satellite W-chromosome 585 chrUn_NT_467180v1 7662 8174 Sat-CR1_GG 186 - 7662 8174 0 2 252,20, 0,492, -,-, 651140 Satellite Satellite 585 chrUn_NT_467180v1 10823 11336 Sat-CR1_GG 198 - 10823 11336 0 2 257,64, 0,449, -,-, 651148 Satellite Satellite 585 chrUn_NT_467180v1 12498 12810 GGXHOI 276 . 12498 12810 0 2 150,143, 0,169, +,-, 651152 Satellite W-chromosome 585 chrUn_NT_467180v1 12697 13210 Sat-CR1_GG 228 - 12697 13210 0 2 257,64, 0,449, -,-, 651153 Satellite Satellite 585 chrUn_NT_467181v1 1434 2491 GGXHOI 393 + 1434 2491 0 2 483,557, 0,500, +,+, 651156 Satellite W-chromosome 585 chrUn_NT_467181v1 2568 13452 GGXHOI 418 + 2568 13452 0 15 781,630,399,975,939,465,523,1536,372,525,540,1432,798,150,524, 0,796,1440,1856,2848,3802,4286,4829,6409,6800,7345,7929,9378,10193,10360, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 651157 Satellite W-chromosome 585 chrUn_NT_467182v1 5113 5740 CR1-H 692 - 5113 5740 0 2 139,469, 0,158, -,-, 651163 LINE CR1 585 chrUn_NT_467182v1 7602 8871 CR1-H 585 - 7602 8871 0 2 115,1154, 0,115, -,-, 651167 LINE CR1 585 chrUn_NT_467183v1 4164 4322 G-rich 539 + 4164 4322 0 2 38,67, 0,91, +,+, 651175 Low_complexity Low_complexity 585 chrUn_NT_467183v1 10144 12846 Z-REP 441 + 10144 12846 0 2 2560,115, 0,2587, +,+, 651182 Satellite macro 585 chrUn_NT_467185v1 13258 13530 Sat-CR1_GG 258 + 13258 13530 0 2 65,15, 0,257, +,+, 651227 Satellite Satellite 585 chrUn_NT_467186v1 5966 6205 G-rich 387 + 5966 6205 0 2 48,146, 0,93, +,+, 651234 Low_complexity Low_complexity 585 chrUn_NT_467188v1 1043 2219 (CAGA)n 558 + 1043 2219 0 4 222,189,294,206, 0,279,497,970, +,+,+,+, 651254 Simple_repeat Simple_repeat 585 chrUn_NT_467188v1 11053 12584 (ACCCATTGGG)n 550 - 11053 12584 0 4 186,623,476,158, 0,215,838,1373, -,-,-,-, 651268 Satellite Satellite 585 chrUn_NT_467189v1 12576 12729 (GGACCAGTAT)n 817 + 12576 12729 0 2 72,42, 0,111, +,+, 651284 Simple_repeat Simple_repeat 585 chrUn_NT_467190v1 405 1858 GGXHOI 534 - 405 1858 0 2 1021,210, 0,1243, -,-, 651290 Satellite W-chromosome 585 chrUn_NT_467190v1 3472 4964 GGXHOI 482 - 3472 4964 0 2 1052,210, 0,1282, -,-, 651293 Satellite W-chromosome 585 chrUn_NT_467190v1 10420 11707 GGXHOI 590 - 10420 11707 0 2 1036,209, 0,1078, -,-, 651298 Satellite W-chromosome 585 chrUn_NT_467190v1 11956 13235 GGXHOI 456 + 11956 13235 0 4 287,278,338,120, 0,306,805,1159, +,+,+,+, 651300 Satellite W-chromosome 585 chrUn_NT_467192v1 6665 12827 GGXHOI 412 - 6665 12827 0 4 896,4334,146,732, 0,914,5264,5430, -,-,-,-, 651323 Satellite W-chromosome 585 chrUn_NT_467193v1 2632 3219 CR1-H 283 + 2632 3219 0 2 188,368, 0,219, +,+, 651329 LINE CR1 585 chrUn_NT_467193v1 5055 5676 CR1-H 379 + 5055 5676 0 2 209,377, 0,244, +,+, 651332 LINE CR1 585 chrUn_NT_467193v1 7549 8169 CR1-H 366 + 7549 8169 0 2 210,375, 0,245, +,+, 651335 LINE CR1 585 chrUn_NT_467196v1 1039 7821 GGXHOI 394 - 1039 7821 0 8 512,886,2044,839,507,813,601,395, 0,524,1422,3478,4379,4897,5768,6387, -,-,-,-,-,-,-,-, 651345 Satellite W-chromosome 585 chrUn_NT_467196v1 7919 11408 GGXHOI 379 - 7919 11408 0 5 550,722,439,1468,154, 0,565,1347,1806,3335, -,-,-,-,-, 651346 Satellite W-chromosome 585 chrUn_NT_467196v1 11537 13246 GGXHOI 385 - 11537 13246 0 3 643,778,231, 0,665,1478, -,-,-, 651347 Satellite W-chromosome 585 chrUn_NT_467197v1 4951 5575 CR1-H 676 - 4951 5575 0 2 139,479, 0,145, -,-, 651354 LINE CR1 585 chrUn_NT_467197v1 8457 8915 CR1-H 674 - 8457 8915 0 2 163,295, 0,163, -,-, 651358 LINE CR1 585 chrUn_NT_467198v1 5818 13523 GGXHOI 398 - 5818 13523 0 5 1564,1307,1718,724,2316, 0,1585,2907,4643,5389, -,-,-,-,-, 651372 Satellite W-chromosome 585 chrUn_NT_467199v1 1456 2610 CR1-B2 605 + 1456 2610 0 2 269,885, 0,269, +,+, 651374 LINE CR1 585 chrUn_NT_467199v1 8274 8577 CR1-X 520 + 8274 8577 0 3 171,78,51, 0,171,252, +,+,+, 651383 LINE CR1 585 chrUn_NT_467201v1 2455 4049 GGXHOI 383 - 2455 4049 0 4 316,169,694,305, 0,333,546,1289, -,-,-,-, 651391 Satellite W-chromosome 585 chrUn_NT_467201v1 4494 7230 GGXHOI 404 - 4494 7230 0 3 406,1769,475, 0,443,2261, -,-,-, 651393 Satellite W-chromosome 585 chrUn_NT_467201v1 7444 8336 GGXHOI 355 - 7444 8336 0 3 448,217,160, 0,460,732, -,-,-, 651394 Satellite W-chromosome 585 chrUn_NT_467201v1 8654 10582 GGXHOI 435 - 8654 10582 0 3 1070,307,515, 0,1090,1413, -,-,-, 651395 Satellite W-chromosome 585 chrUn_NT_467201v1 10732 11544 GGXHOI 413 - 10732 11544 0 3 178,154,447, 0,200,365, -,-,-, 651396 Satellite W-chromosome 585 chrUn_NT_467201v1 11751 12240 GGXHOI 442 - 11751 12240 0 2 292,179, 0,310, -,-, 651397 Satellite W-chromosome 585 chrUn_NT_467202v1 2425 8987 GGXHOI 399 - 2425 8987 0 9 520,1490,493,510,178,1938,435,488,278, 0,547,2069,2596,3123,3333,5286,5753,6284, -,-,-,-,-,-,-,-,-, 651402 Satellite W-chromosome 585 chrUn_NT_467202v1 9103 12118 GGXHOI 407 - 9103 12118 0 4 616,524,1212,583, 0,657,1205,2432, -,-,-,-, 651403 Satellite W-chromosome 585 chrUn_NT_467203v1 2863 2940 (C)n 746 + 2863 2940 0 2 25,27, 0,50, +,+, 651408 Simple_repeat Simple_repeat 585 chrUn_NT_467204v1 6882 7179 CR1-X2 412 + 6882 7179 0 2 63,234, 0,63, +,+, 651418 LINE CR1 585 chrUn_NT_467205v1 3777 5834 GGXHOI 450 - 3777 5834 0 2 100,1941, 0,116, -,-, 651424 Satellite W-chromosome 585 chrUn_NT_467205v1 5943 13551 GGXHOI 428 - 5943 13551 0 9 1275,887,855,405,771,2045,171,600,422, 0,1286,2190,3097,3519,4307,6380,6565,7186, -,-,-,-,-,-,-,-,-, 651425 Satellite W-chromosome 585 chrUn_NT_467206v1 1157 3774 CR1-D 653 - 1157 3774 0 3 1644,863,110, 0,1644,2507, -,-,-, 651427 LINE CR1 585 chrUn_NT_467206v1 4579 4825 Char12Mar1_GG 542 - 4579 4825 0 2 72,174, 0,72, -,-, 651428 DNA hAT-Charlie 585 chrUn_NT_467207v1 10736 11028 GGXHOI 378 + 10736 11028 0 2 133,106, 0,186, +,+, 651437 Satellite W-chromosome 585 chrUn_NT_467211v1 8553 13547 GGXHOI 371 - 8553 13547 0 3 634,2230,2060, 0,650,2934, -,-,-, 651474 Satellite W-chromosome 585 chrUn_NT_467213v1 6103 6335 G-rich 434 + 6103 6335 0 2 38,144, 0,88, +,+, 651491 Low_complexity Low_complexity 585 chrUn_NT_467214v1 13053 13543 CR1-Y2_Aves 418 - 13053 13543 0 2 328,119, 0,371, -,-, 651510 LINE CR1 585 chrUn_NT_467215v1 486 889 (CCTTG)n 542 + 486 889 0 2 207,179, 0,224, +,+, 651513 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 1689 2301 (CAAGG)n 522 + 1689 2301 0 2 379,194, 0,418, +,+, 651518 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 2661 3164 (CCTTG)n 543 + 2661 3164 0 2 259,237, 0,266, +,+, 651521 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 3885 4706 (CCTTG)n 450 + 3885 4706 0 3 155,223,223, 0,333,598, +,+,+, 651526 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 5606 6409 (CCTTG)n 555 + 5606 6409 0 3 286,278,177, 0,306,626, +,+,+, 651529 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 7783 8249 (CCTTG)n 486 + 7783 8249 0 2 259,173, 0,293, +,+, 651536 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 8614 9003 (CCTTG)n 478 + 8614 9003 0 2 183,206, 0,183, +,+, 651539 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 9121 9646 (CCTTG)n 470 + 9121 9646 0 2 155,202, 0,323, +,+, 651541 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 12104 12852 (CAAGG)n 506 + 12104 12852 0 3 167,344,214, 0,190,534, +,+,+, 651549 Simple_repeat Simple_repeat 585 chrUn_NT_467215v1 12975 13336 (CAAGG)n 546 + 12975 13336 0 2 133,54, 0,307, +,+, 651550 Simple_repeat Simple_repeat 585 chrUn_NT_467216v1 3010 11878 GGXHOI 389 - 3010 11878 0 4 3734,897,2484,1668, 0,3751,4702,7200, -,-,-,-, 651554 Satellite W-chromosome 585 chrUn_NT_467216v1 12757 13536 GGXHOI 360 - 12757 13536 0 2 139,605, 0,174, -,-, 651556 Satellite W-chromosome 585 chrUn_NT_467217v1 4887 6338 GGXHOI 377 + 4887 6338 0 2 383,1005, 0,446, +,+, 651564 Satellite W-chromosome 585 chrUn_NT_467217v1 11108 13225 GGXHOI 386 + 11108 13225 0 2 1046,1008, 0,1109, +,+, 651571 Satellite W-chromosome 585 chrUn_NT_467218v1 10407 12860 GGXHOI 397 - 10407 12860 0 2 1071,1348, 0,1105, -,-, 651574 Satellite W-chromosome 585 chrUn_NT_467218v1 12931 13536 GGXHOI 416 - 12931 13536 0 3 168,232,141, 0,197,464, -,-,-, 651575 Satellite W-chromosome 585 chrUn_NT_467219v1 4636 4699 G-rich 344 + 4636 4699 0 2 16,20, 0,43, +,+, 651581 Low_complexity Low_complexity 585 chrUn_NT_467219v1 8965 9215 CR1-X 475 + 8965 9215 0 2 173,77, 0,173, +,+, 651588 LINE CR1 585 chrUn_NT_467220v1 6966 7449 CR1-Y4 583 - 6966 7449 0 2 279,185, 0,298, -,-, 651594 LINE CR1 585 chrUn_NT_467222v1 622 1997 GGXHOI 458 - 622 1997 0 2 1089,274, 0,1101, -,-, 651605 Satellite W-chromosome 585 chrUn_NT_467222v1 3878 3991 (G)n 966 + 3878 3991 0 2 21,30, 0,83, +,+, 651608 Simple_repeat Simple_repeat 585 chrUn_NT_467222v1 3993 13517 GGXHOI 422 - 3993 13517 0 4 2514,809,5489,661, 0,2531,3357,8863, -,-,-,-, 651609 Satellite W-chromosome 585 chrUn_NT_467223v1 5422 7041 GGXHOI 385 - 5422 7041 0 2 516,1040, 0,579, -,-, 651616 Satellite W-chromosome 585 chrUn_NT_467223v1 8365 10471 GGXHOI 386 - 8365 10471 0 2 998,1046, 0,1060, -,-, 651619 Satellite W-chromosome 585 chrUn_NT_467224v1 6954 7410 CR1-H 672 + 6954 7410 0 2 296,160, 0,296, +,+, 651633 LINE CR1 585 chrUn_NT_467224v1 9554 10181 CR1-H 684 + 9554 10181 0 2 469,139, 0,488, +,+, 651636 LINE CR1 585 chrUn_NT_467225v1 4871 7700 GGXHOI 378 - 4871 7700 0 2 1347,1460, 0,1369, -,-, 651644 Satellite W-chromosome 585 chrUn_NT_467225v1 7883 10083 GGXHOI 370 - 7883 10083 0 2 391,1752, 0,448, -,-, 651645 Satellite W-chromosome 585 chrUn_NT_467225v1 11529 12441 GGXHOI 342 - 11529 12441 0 2 718,143, 0,769, -,-, 651647 Satellite W-chromosome 585 chrUn_NT_467225v1 12545 13521 GGXHOI 313 - 12545 13521 0 2 208,711, 0,265, -,-, 651648 Satellite W-chromosome 585 chrUn_NT_467226v1 6811 11819 CR1-F 877 + 6811 11819 0 2 329,4148, 0,860, +,+, 651654 LINE CR1 585 chrUn_NT_467227v1 5129 5657 G-rich 447 + 5129 5657 0 2 37,444, 0,84, +,+, 651665 Low_complexity Low_complexity 585 chrUn_NT_467228v1 5642 5787 (GTTCTTTCC)n 952 + 5642 5787 0 2 48,43, 0,102, +,+, 651686 Simple_repeat Simple_repeat 585 chrUn_NT_467228v1 7674 7837 (GTTCTTTCC)n 952 + 7674 7837 0 2 66,43, 0,120, +,+, 651689 Simple_repeat Simple_repeat 585 chrUn_NT_467228v1 9859 9994 (GTTCTTTCC)n 952 + 9859 9994 0 2 39,43, 0,92, +,+, 651693 Simple_repeat Simple_repeat 585 chrUn_NT_467229v1 2927 5624 GGXHOI 412 - 2927 5624 0 2 380,2294, 0,403, -,-, 651702 Satellite W-chromosome 585 chrUn_NT_467229v1 5897 13167 GGXHOI 417 - 5897 13167 0 2 1745,5464, 0,1806, -,-, 651703 Satellite W-chromosome 585 chrUn_NT_467230v1 1490 2661 (CGAGG)n 542 + 1490 2661 0 3 175,116,657, 0,222,514, +,+,+, 651708 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 3590 3939 (CGAGG)n 534 + 3590 3939 0 2 104,59, 0,290, +,+, 651714 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 3989 4671 (CGAGG)n 599 + 3989 4671 0 2 357,297, 0,385, +,+, 651717 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 5870 7100 (CGAGG)n 549 + 5870 7100 0 3 614,179,368, 0,649,862, +,+,+, 651724 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 7396 8514 (CGAGG)n 510 + 7396 8514 0 3 303,423,178, 0,481,940, +,+,+, 651728 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 9111 9633 (CAAGG)n 454 + 9111 9633 0 2 260,85, 0,437, +,+, 651732 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 9644 10032 (CGAGG)n 604 + 9644 10032 0 2 180,208, 0,180, +,+, 651734 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 9945 10323 (CAAGG)n 482 + 9945 10323 0 2 173,24, 0,354, +,+, 651735 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 10329 11275 (CGAGG)n 610 + 10329 11275 0 4 188,103,120,201, 0,324,449,745, +,+,+,+, 651737 Simple_repeat Simple_repeat 585 chrUn_NT_467230v1 11373 12392 (CGAGG)n 558 + 11373 12392 0 3 222,362,40, 0,437,979, +,+,+, 651741 Simple_repeat Simple_repeat 585 chrUn_NT_467231v1 8140 12822 GGXHOI 375 - 8140 12822 0 4 809,872,1379,1567, 0,832,1720,3115, -,-,-,-, 651747 Satellite W-chromosome 585 chrUn_NT_467233v1 1380 3515 GGXHOI 404 - 1380 3515 0 2 973,1144, 0,991, -,-, 651767 Satellite W-chromosome 585 chrUn_NT_467233v1 3602 9188 GGXHOI 395 - 3602 9188 0 6 281,919,418,1215,997,1618, 0,299,1246,1690,2946,3968, -,-,-,-,-,-, 651768 Satellite W-chromosome 585 chrUn_NT_467233v1 9272 10949 GGXHOI 385 - 9272 10949 0 2 512,1135, 0,542, -,-, 651769 Satellite W-chromosome 585 chrUn_NT_467234v1 4150 13490 GGXHOI 423 - 4150 13490 0 2 2795,6531, 0,2809, -,-, 651773 Satellite W-chromosome 585 chrUn_NT_467235v1 9066 11217 GGLTR7-int 586 + 9066 11217 0 2 333,527, 0,1624, +,+, 651783 LTR ERV1 585 chrUn_NT_467235v1 11272 13408 GGLTR10D-int 800 - 11272 13408 0 2 361,1766, 0,370, -,-, 651785 LTR ERVK 585 chrUn_NT_467237v1 4240 4427 (TCC)n 833 + 4240 4427 0 3 22,22,19, 0,84,168, +,+,+, 651795 Simple_repeat Simple_repeat 585 chrUn_NT_467237v1 6737 6846 (TCC)n 770 + 6737 6846 0 2 22,25, 0,84, +,+, 651798 Simple_repeat Simple_repeat 585 chrUn_NT_467237v1 6926 7311 (TCC)n 799 + 6926 7311 0 5 22,22,22,28,43, 0,84,168,252,342, +,+,+,+,+, 651799 Simple_repeat Simple_repeat 585 chrUn_NT_467237v1 9428 9727 (TCC)n 784 + 9428 9727 0 4 22,22,28,42, 0,84,167,257, +,+,+,+, 651801 Simple_repeat Simple_repeat 585 chrUn_NT_467240v1 797 3097 GGXHOI 524 + 797 3097 0 5 200,331,368,188,19, 0,423,1063,1632,2281, +,+,+,+,+, 651821 Satellite W-chromosome 585 chrUn_NT_467240v1 3174 6905 GGXHOI 505 + 3174 6905 0 7 207,65,248,360,152,1128,166, 0,475,570,1138,1794,2425,3565, +,+,+,+,+,+,+, 651826 Satellite W-chromosome 585 chrUn_NT_467240v1 7385 8052 GGXHOI 534 + 7385 8052 0 2 330,17, 0,650, +,+, 651832 Satellite W-chromosome 585 chrUn_NT_467240v1 8120 9239 GGXHOI 432 + 8120 9239 0 2 260,646, 0,473, +,+, 651834 Satellite W-chromosome 585 chrUn_NT_467240v1 9307 10141 GGXHOI 511 + 9307 10141 0 3 273,180,125, 0,483,709, +,+,+, 651836 Satellite W-chromosome 585 chrUn_NT_467240v1 11618 12800 GGXHOI 564 + 11618 12800 0 4 379,116,124,18, 0,565,728,1164, +,+,+,+, 651841 Satellite W-chromosome 585 chrUn_NT_467240v1 12878 13468 GGXHOI 566 + 12878 13468 0 2 214,152, 0,438, +,+, 651844 Satellite W-chromosome 585 chrUn_NT_467241v1 7999 13479 GGXHOI 387 + 7999 13479 0 4 633,617,168,3959, 0,653,1310,1521, +,+,+,+, 651848 Satellite W-chromosome 585 chrUn_NT_467242v1 802 5043 ENS1-int 715 + 802 5043 0 4 951,1140,1094,825, 0,951,2322,3416, +,+,+,+, 651850 LTR ERVL 585 chrUn_NT_467242v1 5045 7167 GGXHOI 366 - 5045 7167 0 7 333,125,603,177,134,256,366, 0,355,494,1112,1302,1454,1756, -,-,-,-,-,-,-, 651851 Satellite W-chromosome 585 chrUn_NT_467242v1 7297 8823 GGXHOI 337 - 7297 8823 0 7 329,225,141,134,129,141,196, 0,365,606,791,952,1143,1330, -,-,-,-,-,-,-, 651852 Satellite W-chromosome 585 chrUn_NT_467242v1 9565 12847 GGXHOI 350 - 9565 12847 0 7 362,460,606,229,427,221,814, 0,387,895,1522,1794,2232,2468, -,-,-,-,-,-,-, 651855 Satellite W-chromosome 585 chrUn_NT_467245v1 1189 6957 GGXHOI 339 - 1189 6957 0 7 397,1097,262,1661,1165,387,553, 0,418,1577,1901,3583,4809,5215, -,-,-,-,-,-,-, 651911 Satellite W-chromosome 585 chrUn_NT_467245v1 7137 10228 GGXHOI 368 - 7137 10228 0 4 428,596,351,1625, 0,445,1099,1466, -,-,-,-, 651912 Satellite W-chromosome 585 chrUn_NT_467245v1 11273 13416 GGXHOI 343 - 11273 13416 0 3 345,1004,763, 0,361,1380, -,-,-, 651915 Satellite W-chromosome 585 chrUn_NT_467247v1 177 10679 (CAAGG)n 544 + 177 10679 0 2 141,10156, 0,346, +,+, 651922 Simple_repeat Simple_repeat 585 chrUn_NT_467248v1 4987 7994 GGXHOI 391 - 4987 7994 0 2 217,2769, 0,238, -,-, 651926 Satellite W-chromosome 585 chrUn_NT_467248v1 8524 10954 GGXHOI 378 - 8524 10954 0 5 190,347,587,807,391, 0,214,579,1182,2039, -,-,-,-,-, 651927 Satellite W-chromosome 585 chrUn_NT_467248v1 12528 13386 GGXHOI 351 - 12528 13386 0 2 268,574, 0,284, -,-, 651929 Satellite W-chromosome 585 chrUn_NT_467249v1 900 6137 GGXHOI 371 - 900 6137 0 7 1429,270,935,341,322,1041,719, 0,1486,1770,2722,3079,3416,4518, -,-,-,-,-,-,-, 651931 Satellite W-chromosome 585 chrUn_NT_467249v1 7271 13447 GGXHOI 390 - 7271 13447 0 7 842,1206,1282,640,588,342,1121, 0,871,2104,3400,4058,4684,5055, -,-,-,-,-,-,-, 651933 Satellite W-chromosome 585 chrUn_NT_467252v1 363 13459 GGXHOI 368 - 363 13459 0 10 1452,263,2502,908,2748,1014,676,833,1938,475, 0,1464,1743,4302,5227,8033,9071,9810,10666,12621, -,-,-,-,-,-,-,-,-,-, 651945 Satellite W-chromosome 585 chrUn_NT_467253v1 6561 8497 GGXHOI 328 - 6561 8497 0 5 522,468,125,135,587, 0,540,1063,1202,1349, -,-,-,-,-, 651947 Satellite W-chromosome 585 chrUn_NT_467253v1 8651 13474 GGXHOI 393 - 8651 13474 0 17 254,192,125,303,449,133,173,117,366,256,271,84,564,399,273,426,59, 0,302,508,646,982,1456,1603,1811,1946,2327,2629,2912,3012,3620,4032,4324,4764, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 651948 Satellite W-chromosome 585 chrUn_NT_467255v1 2898 4031 CR1-B2 679 + 2898 4031 0 2 226,907, 0,226, +,+, 651954 LINE CR1 585 chrUn_NT_467255v1 13089 13398 CR1-X 530 - 13089 13398 0 3 50,78,171, 0,60,138, -,-,-, 651965 LINE CR1 585 chrUn_NT_467256v1 522 2341 GGLTR3B1 720 + 522 2341 0 2 295,1524, 0,295, +,+, 651968 LTR ERVL 585 chrUn_NT_467256v1 2341 13452 GGERV20_I-int 821 + 2341 13452 0 7 456,732,352,521,213,2457,1951, 0,458,1190,5968,6489,6703,9160, +,+,+,+,+,+,+, 651969 LTR ERVL 585 chrUn_NT_467257v1 448 2155 GGLTR7-int 532 - 448 2155 0 3 74,366,562, 0,602,1145, -,-,-, 651973 LTR ERV1 585 chrUn_NT_467258v1 3107 4768 GGXHOI 564 - 3107 4768 0 2 1236,363, 0,1298, -,-, 651984 Satellite W-chromosome 585 chrUn_NT_467258v1 7013 10235 GGXHOI 567 - 7013 10235 0 3 1560,1094,352, 0,1582,2870, -,-,-, 651987 Satellite W-chromosome 585 chrUn_NT_467258v1 10301 11644 GGXHOI 586 - 10301 11644 0 2 796,219, 0,1124, -,-, 651989 Satellite W-chromosome 585 chrUn_NT_467260v1 12394 13440 SSU-rRNA_Hsa 840 + 12394 13440 0 2 646,361, 0,685, +,+, 652004 rRNA rRNA 585 chrUn_NT_467261v1 608 1852 GGXHOI 369 + 608 1852 0 2 141,1045, 0,199, +,+, 652006 Satellite W-chromosome 585 chrUn_NT_467261v1 3275 4895 GGXHOI 382 + 3275 4895 0 2 472,1085, 0,535, +,+, 652008 Satellite W-chromosome 585 chrUn_NT_467261v1 5423 6967 GGXHOI 387 + 5423 6967 0 2 472,1009, 0,535, +,+, 652010 Satellite W-chromosome 585 chrUn_NT_467261v1 10868 11222 GGXHOI 299 + 10868 11222 0 2 189,131, 0,223, +,+, 652016 Satellite W-chromosome 585 chrUn_NT_467262v1 3428 4550 CR1-B2 711 - 3428 4550 0 2 894,225, 0,897, -,-, 652024 LINE CR1 585 chrUn_NT_467263v1 2971 10405 Z-REP 773 + 2971 10405 0 2 1746,5632, 0,1802, +,+, 652035 Satellite macro 585 chrUn_NT_467264v1 2602 3002 (CGAGG)n 456 + 2602 3002 0 2 178,193, 0,207, +,+, 652042 Simple_repeat Simple_repeat 585 chrUn_NT_467264v1 6040 6794 (CGAGG)n 498 + 6040 6794 0 2 372,365, 0,389, +,+, 652050 Simple_repeat Simple_repeat 585 chrUn_NT_467264v1 6913 8174 (CGAGG)n 513 + 6913 8174 0 3 588,297,174, 0,766,1087, +,+,+, 652052 Simple_repeat Simple_repeat 585 chrUn_NT_467264v1 8746 9176 (CGAGG)n 485 + 8746 9176 0 2 222,180, 0,250, +,+, 652058 Simple_repeat Simple_repeat 585 chrUn_NT_467264v1 10514 12729 (CGAGG)n 549 + 10514 12729 0 7 355,177,184,263,359,40,540, 0,376,573,788,1062,1598,1675, +,+,+,+,+,+,+, 652061 Simple_repeat Simple_repeat 585 chrUn_NT_467267v1 4427 5176 GGXHOI 309 - 4427 5176 0 2 123,611, 0,138, -,-, 652076 Satellite W-chromosome 585 chrUn_NT_467267v1 5259 7757 GGXHOI 385 - 5259 7757 0 3 312,379,1774, 0,328,724, -,-,-, 652077 Satellite W-chromosome 585 chrUn_NT_467268v1 12003 12137 (CCCTT)n 370 + 12003 12137 0 2 69,28, 0,106, +,+, 652106 Simple_repeat Simple_repeat 585 chrUn_NT_467270v1 6347 6832 (GCCCCACAGCT)n 488 + 6347 6832 0 2 119,329, 0,156, +,+, 652121 Satellite Satellite 585 chrUn_NT_467270v1 8547 8650 G-rich 298 + 8547 8650 0 2 13,46, 0,57, +,+, 652124 Low_complexity Low_complexity 585 chrUn_NT_467271v1 12880 13329 GGLTR11-int 450 + 12880 13329 0 2 129,180, 0,269, +,+, 652139 LTR ERV1 585 chrUn_NT_467272v1 2915 3912 GGXHOI 415 - 2915 3912 0 3 489,146,338, 0,502,659, -,-,-, 652142 Satellite W-chromosome 585 chrUn_NT_467272v1 3997 6897 GGXHOI 403 - 3997 6897 0 2 647,2238, 0,662, -,-, 652143 Satellite W-chromosome 585 chrUn_NT_467272v1 6983 7976 GGXHOI 415 - 6983 7976 0 3 485,146,338, 0,498,655, -,-,-, 652144 Satellite W-chromosome 585 chrUn_NT_467272v1 8061 11203 GGXHOI 418 - 8061 11203 0 4 688,1933,146,337, 0,703,2648,2805, -,-,-,-, 652145 Satellite W-chromosome 585 chrUn_NT_467272v1 11286 12995 GGXHOI 368 - 11286 12995 0 2 837,824, 0,885, -,-, 652146 Satellite W-chromosome 585 chrUn_NT_467276v1 1113 5486 GGXHOI 359 - 1113 5486 0 5 398,2001,115,1504,255, 0,414,2466,2596,4118, -,-,-,-,-, 652161 Satellite W-chromosome 585 chrUn_NT_467276v1 5848 7146 GGXHOI 395 - 5848 7146 0 4 105,551,404,172, 0,122,703,1126, -,-,-,-, 652162 Satellite W-chromosome 585 chrUn_NT_467276v1 7295 8632 GGXHOI 401 - 7295 8632 0 3 196,441,663, 0,216,674, -,-,-, 652163 Satellite W-chromosome 585 chrUn_NT_467276v1 8817 10511 GGXHOI 343 - 8817 10511 0 5 111,465,493,356,153, 0,128,612,1164,1541, -,-,-,-,-, 652164 Satellite W-chromosome 585 chrUn_NT_467276v1 11254 13412 GGXHOI 419 - 11254 13412 0 4 937,410,534,188, 0,957,1415,1970, -,-,-,-, 652166 Satellite W-chromosome 585 chrUn_NT_467279v1 2571 7283 CR1-D2 553 - 2571 7283 0 2 573,810, 0,3902, -,-, 652193 LINE CR1 585 chrUn_NT_467279v1 3841 6487 CR1-D 661 - 3841 6487 0 3 1641,897,108, 0,1641,2538, -,-,-, 652194 LINE CR1 585 chrUn_NT_467279v1 7273 7518 Char12Mar1_GG 554 - 7273 7518 0 2 73,172, 0,73, -,-, 652195 DNA hAT-Charlie 585 chrUn_NT_467280v1 1426 1767 (ACCCCATAGGG)n 77 - 1426 1767 0 2 158,169, 0,172, -,-, 652203 Satellite Satellite 585 chrUn_NT_467280v1 2629 2839 (ACCCCATAGGG)n 162 - 2629 2839 0 2 61,40, 0,170, -,-, 652206 Satellite Satellite 585 chrUn_NT_467280v1 4377 4788 (ACCCCATAGGG)n 122 - 4377 4788 0 2 211,147, 0,264, -,-, 652214 Satellite Satellite 585 chrUn_NT_467281v1 12328 12741 CR1-H 639 + 12328 12741 0 2 295,118, 0,295, +,+, 652232 LINE CR1 585 chrUn_NT_467283v1 6844 8021 GGXHOI 380 - 6844 8021 0 3 230,632,282, 0,251,895, -,-,-, 652239 Satellite W-chromosome 585 chrUn_NT_467283v1 8405 13395 GGXHOI 349 - 8405 13395 0 9 901,185,249,175,252,527,545,477,1493, 0,917,1121,1383,1579,1861,2436,2997,3497, -,-,-,-,-,-,-,-,-, 652241 Satellite W-chromosome 585 chrUn_NT_467284v1 7288 9525 GGXHOI 345 - 7288 9525 0 6 895,138,362,97,329,301, 0,911,1061,1436,1547,1936, -,-,-,-,-,-, 652243 Satellite W-chromosome 585 chrUn_NT_467284v1 9979 10989 GGXHOI 374 - 9979 10989 0 2 244,752, 0,258, -,-, 652245 Satellite W-chromosome 585 chrUn_NT_467284v1 11227 13399 GGXHOI 379 - 11227 13399 0 4 446,509,186,886, 0,501,1051,1286, -,-,-,-, 652246 Satellite W-chromosome 585 chrUn_NT_467285v1 672 1372 (CAAGG)n 627 + 672 1372 0 2 182,493, 0,207, +,+, 652249 Simple_repeat Simple_repeat 585 chrUn_NT_467285v1 1411 4314 (CAAGG)n 642 + 1411 4314 0 10 365,184,182,460,341,114,78,148,86,466, 0,390,587,780,1261,1602,1895,1973,2296,2437, +,+,+,+,+,+,+,+,+,+, 652251 Simple_repeat Simple_repeat 585 chrUn_NT_467285v1 4369 5441 (CAAGG)n 576 + 4369 5441 0 3 251,71,576, 0,413,496, +,+,+, 652256 Simple_repeat Simple_repeat 585 chrUn_NT_467285v1 5981 6639 (CAAGG)n 575 + 5981 6639 0 3 185,240,195, 0,185,463, +,+,+, 652261 Simple_repeat Simple_repeat 585 chrUn_NT_467285v1 6748 7930 (CAAGG)n 640 + 6748 7930 0 4 182,284,76,233, 0,211,867,949, +,+,+,+, 652263 Simple_repeat Simple_repeat 585 chrUn_NT_467285v1 7923 12103 GGXHOI 394 - 7923 12103 0 5 785,782,149,2133,272, 0,801,1594,1759,3908, -,-,-,-,-, 652266 Satellite W-chromosome 585 chrUn_NT_467286v1 38 649 (CCTTG)n 507 + 38 649 0 2 370,207, 0,404, +,+, 652269 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 748 2215 (CCTTG)n 489 + 748 2215 0 4 187,339,656,217, 0,229,594,1250, +,+,+,+, 652270 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 2259 3039 (CCTTG)n 590 + 2259 3039 0 3 160,75,229, 0,433,551, +,+,+, 652272 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 3111 3494 (CCTTG)n 546 + 3111 3494 0 2 138,36, 0,347, +,+, 652275 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 3723 3797 (CCTTGC)n 372 + 3723 3797 0 2 13,30, 0,44, +,+, 652278 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 3825 4774 (CCTTG)n 587 + 3825 4774 0 3 182,564,192, 0,193,757, +,+,+, 652280 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 4813 5355 (CCTTG)n 612 + 4813 5355 0 2 290,82, 0,460, +,+, 652282 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 5480 5981 (CCTTG)n 622 + 5480 5981 0 2 219,134, 0,367, +,+, 652285 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 6073 6788 (CCTTG)n 624 + 6073 6788 0 3 109,17,73, 0,387,642, +,+,+, 652288 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 6859 8098 (CCTTG)n 618 + 6859 8098 0 5 198,150,33,363,179, 0,223,615,668,1060, +,+,+,+,+, 652293 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 8186 9023 (CCTTG)n 587 + 8186 9023 0 4 192,220,179,183, 0,223,455,654, +,+,+,+, 652296 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 9093 9679 (CCTTG)n 518 + 9093 9679 0 3 181,101,55, 0,181,531, +,+,+, 652297 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 9794 11060 (CCTTG)n 626 + 9794 11060 0 4 180,485,117,260, 0,214,699,1006, +,+,+,+, 652300 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 11908 12291 (CCTTG)n 619 + 11908 12291 0 2 178,182, 0,201, +,+, 652308 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 12354 12901 (CCTTG)n 628 + 12354 12901 0 2 123,122, 0,425, +,+, 652310 Simple_repeat Simple_repeat 585 chrUn_NT_467286v1 13021 13388 (CCTTG)n 599 + 13021 13388 0 2 180,187, 0,180, +,+, 652314 Simple_repeat Simple_repeat 585 chrUn_NT_467287v1 8280 12971 GGXHOI 401 - 8280 12971 0 6 326,1049,702,589,1530,389, 0,342,1406,2145,2760,4302, -,-,-,-,-,-, 652316 Satellite W-chromosome 585 chrUn_NT_467288v1 4175 5302 CR1-B2 679 + 4175 5302 0 2 226,898, 0,229, +,+, 652319 LINE CR1 585 chrUn_NT_467290v1 7574 7831 A-rich 364 + 7574 7831 0 2 144,69, 0,188, +,+, 652336 Low_complexity Low_complexity 585 chrUn_NT_467290v1 11966 12695 GGXHOI 304 + 11966 12695 0 3 188,133,346, 0,203,383, +,+,+, 652340 Satellite W-chromosome 585 chrUn_NT_467290v1 12761 13387 GGXHOI 400 + 12761 13387 0 2 211,394, 0,232, +,+, 652341 Satellite W-chromosome 585 chrUn_NT_467291v1 2925 10473 GGXHOI 434 + 2925 10473 0 9 283,2098,1407,64,434,992,64,1434,559, 0,340,2454,3918,4002,4449,5456,5540,6989, +,+,+,+,+,+,+,+,+, 652345 Satellite W-chromosome 585 chrUn_NT_467291v1 10613 11762 GGXHOI 393 + 10613 11762 0 2 505,624, 0,525, +,+, 652346 Satellite W-chromosome 585 chrUn_NT_467292v1 1129 1515 (CCTTG)n 456 + 1129 1515 0 2 182,187, 0,199, +,+, 652352 Simple_repeat Simple_repeat 585 chrUn_NT_467292v1 3718 4094 (CCTTG)n 484 + 3718 4094 0 2 177,199, 0,177, +,+, 652363 Simple_repeat Simple_repeat 585 chrUn_NT_467292v1 4181 4541 (GCCTG)n 272 + 4181 4541 0 2 86,256, 0,104, +,+, 652366 Simple_repeat Simple_repeat 585 chrUn_NT_467292v1 4565 5449 (CAAGG)n 506 + 4565 5449 0 3 193,352,250, 0,256,634, +,+,+, 652367 Simple_repeat Simple_repeat 585 chrUn_NT_467292v1 5497 5603 (CCTTG)n 421 + 5497 5603 0 2 57,24, 0,82, +,+, 652368 Simple_repeat Simple_repeat 585 chrUn_NT_467293v1 657 8086 Z-REP 761 + 657 8086 0 3 293,1644,5451, 0,307,1978, +,+,+, 652382 Satellite macro 585 chrUn_NT_467295v1 4876 6284 GGXHOI 514 - 4876 6284 0 2 983,169, 0,1239, -,-, 652394 Satellite W-chromosome 585 chrUn_NT_467295v1 11027 12487 GGXHOI 546 - 11027 12487 0 2 1027,211, 0,1249, -,-, 652402 Satellite W-chromosome 585 chrUn_NT_467296v1 179 4320 GGXHOI 373 + 179 4320 0 3 1488,835,1741, 0,1504,2400, +,+,+, 652406 Satellite W-chromosome 585 chrUn_NT_467296v1 4422 13375 GGXHOI 373 + 4422 13375 0 9 865,835,905,833,1754,1754,897,446,339, 0,881,1778,2699,3594,5410,7225,8141,8614, +,+,+,+,+,+,+,+,+, 652407 Satellite W-chromosome 585 chrUn_NT_467297v1 1277 2396 CR1-B2 704 - 1277 2396 0 2 893,223, 0,896, -,-, 652411 LINE CR1 585 chrUn_NT_467298v1 343 3290 (CGAGG)n 561 + 343 3290 0 11 180,207,181,125,125,64,177,198,234,6,41, 0,222,448,648,945,1252,1351,1559,1935,2721,2906, +,+,+,+,+,+,+,+,+,+,+, 652423 Simple_repeat Simple_repeat 585 chrUn_NT_467298v1 3360 3935 (CGAGG)n 604 + 3360 3935 0 2 308,103, 0,472, +,+, 652432 Simple_repeat Simple_repeat 585 chrUn_NT_467298v1 5329 6457 (CGAGG)n 585 + 5329 6457 0 4 186,271,415,222, 0,196,483,906, +,+,+,+, 652442 Simple_repeat Simple_repeat 585 chrUn_NT_467298v1 7389 8434 (CGAGG)n 581 + 7389 8434 0 3 223,226,545, 0,236,500, +,+,+, 652449 Simple_repeat Simple_repeat 585 chrUn_NT_467298v1 8506 8924 (CGAGG)n 505 + 8506 8924 0 2 185,182, 0,236, +,+, 652451 Simple_repeat Simple_repeat 585 chrUn_NT_467298v1 8995 11899 (CGAGG)n 546 + 8995 11899 0 12 349,182,184,82,29,213,51,173,94,31,197,348, 0,363,572,756,1024,1232,1726,1808,1993,2263,2325,2556, +,+,+,+,+,+,+,+,+,+,+,+, 652453 Simple_repeat Simple_repeat 585 chrUn_NT_467298v1 12100 13068 (CGAGG)n 541 + 12100 13068 0 3 376,214,360, 0,378,608, +,+,+, 652462 Simple_repeat Simple_repeat 585 chrUn_NT_467300v1 13001 13361 GGLTR3F1 671 + 13001 13361 0 2 220,89, 0,271, +,+, 652483 LTR ERVL 585 chrUn_NT_467301v1 1736 4279 GGERVL-B-int 711 + 1736 4279 0 4 296,64,1077,745, 0,656,721,1798, +,+,+,+, 652488 LTR ERVL 585 chrUn_NT_467301v1 4272 5557 GGLTR7-int 351 + 4272 5557 0 3 68,314,210, 0,70,1075, +,+,+, 652489 LTR ERV1 585 chrUn_NT_467302v1 430 4482 GGXHOI 529 + 430 4482 0 6 655,161,549,1560,174,406, 0,695,895,1505,3460,3646, +,+,+,+,+,+, 652499 Satellite W-chromosome 585 chrUn_NT_467302v1 4997 10623 GGXHOI 554 + 4997 10623 0 7 162,113,1058,446,762,1603,54, 0,556,722,2360,2819,3907,5572, +,+,+,+,+,+,+, 652502 Satellite W-chromosome 585 chrUn_NT_467302v1 10695 13181 GGXHOI 546 + 10695 13181 0 3 49,699,1115, 0,324,1371, +,+,+, 652506 Satellite W-chromosome 585 chrUn_NT_467305v1 146 2287 (CGAGG)n 554 + 146 2287 0 4 177,215,818,872, 0,214,440,1269, +,+,+,+, 652528 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 2401 2781 (CGAGG)n 598 + 2401 2781 0 2 180,200, 0,180, +,+, 652530 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 2875 3277 (CGAGG)n 571 + 2875 3277 0 2 179,184, 0,218, +,+, 652532 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 4763 5921 (CGAGG)n 514 + 4763 5921 0 2 930,183, 0,975, +,+, 652538 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 6230 6880 (CGAGG)n 549 + 6230 6880 0 2 449,180, 0,470, +,+, 652542 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 6951 8462 (CGAGG)n 554 + 6951 8462 0 3 536,359,582, 0,555,929, +,+,+, 652544 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 9084 9730 (CGAGG)n 571 + 9084 9730 0 2 362,224, 0,422, +,+, 652549 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 9882 11199 (CGAGG)n 546 + 9882 11199 0 6 187,195,181,264,40,179, 0,187,417,628,1069,1138, +,+,+,+,+,+, 652550 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 11289 12395 (CGAGG)n 543 + 11289 12395 0 4 198,179,472,190, 0,213,428,916, +,+,+,+, 652553 Simple_repeat Simple_repeat 585 chrUn_NT_467305v1 12915 13323 (CGAGG)n 545 + 12915 13323 0 2 166,181, 0,227, +,+, 652555 Simple_repeat Simple_repeat 585 chrUn_NT_467306v1 2515 3143 GGXHOI 366 + 2515 3143 0 2 111,504, 0,124, +,+, 652558 Satellite W-chromosome 585 chrUn_NT_467306v1 3285 10375 GGXHOI 382 + 3285 10375 0 3 3068,3856,136, 0,3085,6954, +,+,+, 652559 Satellite W-chromosome 585 chrUn_NT_467306v1 10521 12366 GGXHOI 349 + 10521 12366 0 3 351,616,813, 0,399,1032, +,+,+, 652560 Satellite W-chromosome 585 chrUn_NT_467308v1 5798 6793 GGXHOI 361 - 5798 6793 0 3 135,583,215, 0,149,780, -,-,-, 652565 Satellite W-chromosome 585 chrUn_NT_467308v1 7079 11230 GGXHOI 374 - 7079 11230 0 10 133,415,131,161,758,334,397,724,131,685, 0,149,599,764,971,1775,2146,2557,3322,3466, -,-,-,-,-,-,-,-,-,-, 652567 Satellite W-chromosome 585 chrUn_NT_467309v1 7368 8562 GGXHOI 368 - 7368 8562 0 2 631,516, 0,678, -,-, 652572 Satellite W-chromosome 585 chrUn_NT_467309v1 8702 9400 GGXHOI 358 - 8702 9400 0 2 251,434, 0,264, -,-, 652573 Satellite W-chromosome 585 chrUn_NT_467309v1 11063 13353 GGXHOI 406 - 11063 13353 0 4 510,1146,64,478, 0,567,1733,1812, -,-,-,-, 652576 Satellite W-chromosome 585 chrUn_NT_467311v1 3576 4189 CR1-X 421 + 3576 4189 0 4 51,167,132,263, 0,51,218,350, +,+,+,+, 652632 LINE CR1 585 chrUn_NT_467312v1 2008 2996 GGXHOI 413 - 2008 2996 0 3 559,148,248, 0,577,740, -,-,-, 652642 Satellite W-chromosome 585 chrUn_NT_467312v1 3078 4068 GGXHOI 413 - 3078 4068 0 3 485,146,335, 0,498,655, -,-,-, 652643 Satellite W-chromosome 585 chrUn_NT_467312v1 4151 5141 GGXHOI 393 - 4151 5141 0 2 644,331, 0,659, -,-, 652644 Satellite W-chromosome 585 chrUn_NT_467312v1 5224 6213 GGXHOI 389 - 5224 6213 0 2 641,333, 0,656, -,-, 652645 Satellite W-chromosome 585 chrUn_NT_467312v1 6298 7292 GGXHOI 415 - 6298 7292 0 3 487,146,337, 0,500,657, -,-,-, 652646 Satellite W-chromosome 585 chrUn_NT_467312v1 7376 12662 GGXHOI 416 - 7376 12662 0 6 1715,898,146,1064,1061,334, 0,1730,2640,2797,3876,4952, -,-,-,-,-,-, 652647 Satellite W-chromosome 585 chrUn_NT_467313v1 4612 7353 GGERVL-B-int 705 - 4612 7353 0 2 915,1826, 0,915, -,-, 652651 LTR ERVL 585 chrUn_NT_467313v1 9414 9831 (CAGGC)n 559 + 9414 9831 0 2 174,216, 0,201, +,+, 652654 Simple_repeat Simple_repeat 585 chrUn_NT_467313v1 10624 11058 (CAGGC)n 486 + 10624 11058 0 2 231,203, 0,231, +,+, 652660 Simple_repeat Simple_repeat 585 chrUn_NT_467313v1 11677 12890 (CAAGG)n 598 + 11677 12890 0 5 177,241,26,59,349, 0,177,601,805,864, +,+,+,+,+, 652665 Simple_repeat Simple_repeat 585 chrUn_NT_467314v1 3589 13314 GGXHOI 409 + 3589 13314 0 6 4048,711,519,3532,388,392, 0,4059,4792,5326,8906,9333, +,+,+,+,+,+, 652671 Satellite W-chromosome 585 chrUn_NT_467315v1 11114 13097 Sat-CR1_GG 164 - 11114 13097 0 2 429,969, 0,1014, -,-, 652677 Satellite Satellite 585 chrUn_NT_467315v1 12165 13335 GGXHOI 518 - 12165 13335 0 2 657,284, 0,886, -,-, 652679 Satellite W-chromosome 585 chrUn_NT_467316v1 4478 5043 GGXHOI 518 - 4478 5043 0 2 22,224, 0,341, -,-, 652684 Satellite W-chromosome 585 chrUn_NT_467316v1 5653 6236 GGXHOI 478 - 5653 6236 0 2 21,219, 0,364, -,-, 652687 Satellite W-chromosome 585 chrUn_NT_467316v1 6320 7446 GGXHOI 529 - 6320 7446 0 2 350,724, 0,402, -,-, 652689 Satellite W-chromosome 585 chrUn_NT_467316v1 7539 8633 GGXHOI 517 - 7539 8633 0 2 520,559, 0,535, -,-, 652690 Satellite W-chromosome 585 chrUn_NT_467316v1 8758 9858 GGXHOI 511 - 8758 9858 0 2 513,570, 0,530, -,-, 652691 Satellite W-chromosome 585 chrUn_NT_467316v1 9926 12191 GGXHOI 573 - 9926 12191 0 5 43,186,21,869,223, 0,312,514,852,2042, -,-,-,-,-, 652692 Satellite W-chromosome 585 chrUn_NT_467316v1 12261 13334 GGXHOI 554 - 12261 13334 0 2 535,218, 0,855, -,-, 652696 Satellite W-chromosome 585 chrUn_NT_467317v1 8730 9127 GA-rich 544 + 8730 9127 0 2 180,181, 0,216, +,+, 652701 Low_complexity Low_complexity 585 chrUn_NT_467320v1 58 1105 CR1-Y2 573 + 58 1105 0 2 104,115, 0,932, +,+, 652718 LINE CR1 585 chrUn_NT_467320v1 1389 1670 CR1-Y 460 + 1389 1670 0 2 93,96, 0,185, +,+, 652722 LINE CR1 585 chrUn_NT_467320v1 4854 5126 CR1-Y4 678 + 4854 5126 0 5 62,53,52,53,52, 0,62,115,167,220, +,+,+,+,+, 652731 LINE CR1 585 chrUn_NT_467320v1 6193 6985 CR1-F0 485 + 6193 6985 0 4 12,24,82,83, 0,308,391,709, +,+,+,+, 652735 LINE CR1 585 chrUn_NT_467321v1 1261 1822 (CCTCG)n 558 + 1261 1822 0 2 262,127, 0,434, +,+, 652752 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 2540 3830 (CCTCG)n 590 + 2540 3830 0 4 179,84,75,384, 0,198,460,906, +,+,+,+, 652760 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 3075 3446 (CCTTG)n 474 + 3075 3446 0 2 156,33, 0,338, +,+, 652762 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 3841 4825 (CCTCG)n 512 + 3841 4825 0 4 182,179,369,207, 0,197,388,777, +,+,+,+, 652765 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 4882 5931 (CCTCG)n 562 + 4882 5931 0 4 173,63,371,181, 0,359,462,868, +,+,+,+, 652767 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 5951 6737 (CCTCG)n 562 + 5951 6737 0 2 355,168, 0,618, +,+, 652770 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 6997 7856 (CCTCG)n 590 + 6997 7856 0 2 161,520, 0,339, +,+, 652776 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 7364 7936 (CCTTG)n 454 + 7364 7936 0 2 192,197, 0,375, +,+, 652778 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 7870 8308 (CCTCG)n 592 + 7870 8308 0 2 208,45, 0,393, +,+, 652780 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 9371 10347 (CCTCG)n 507 + 9371 10347 0 3 345,185,382, 0,391,594, +,+,+, 652789 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 10729 11104 (CCTTG)n 459 + 10729 11104 0 2 180,195, 0,180, +,+, 652791 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 11436 11835 (CCTCG)n 493 + 11436 11835 0 2 187,176, 0,223, +,+, 652794 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 11899 12679 (CCTCG)n 508 + 11899 12679 0 4 270,126,11,16, 0,288,571,764, +,+,+,+, 652795 Simple_repeat Simple_repeat 585 chrUn_NT_467321v1 12726 13273 (CCTCG)n 506 + 12726 13273 0 2 40,323, 0,224, +,+, 652799 Simple_repeat Simple_repeat 585 chrUn_NT_467322v1 5188 12417 GGXHOI 395 - 5188 12417 0 7 870,1944,978,978,1102,844,398, 0,890,2854,3852,4850,5967,6831, -,-,-,-,-,-,-, 652803 Satellite W-chromosome 585 chrUn_NT_467323v1 11664 12035 (ACCCCATAGGG)n 369 - 11664 12035 0 2 257,96, 0,275, -,-, 652815 Satellite Satellite 585 chrUn_NT_467326v1 6152 7748 GGXHOI 514 - 6152 7748 0 2 77,736, 0,860, -,-, 652851 Satellite W-chromosome 585 chrUn_NT_467326v1 7767 9776 GGXHOI 554 - 7767 9776 0 2 489,232, 0,1777, -,-, 652854 Satellite W-chromosome 585 chrUn_NT_467326v1 10801 12050 Sat-CR1_GG 160 - 10801 12050 0 2 305,205, 0,1044, -,-, 652858 Satellite Satellite 585 chrUn_NT_467327v1 994 1056 (C)n 865 + 994 1056 0 2 27,19, 0,43, +,+, 652868 Simple_repeat Simple_repeat 585 chrUn_NT_467327v1 2331 2487 CR1-H2 476 + 2331 2487 0 2 82,74, 0,82, +,+, 652876 LINE CR1 585 chrUn_NT_467327v1 4044 4274 CR1-H2 485 + 4044 4274 0 3 74,82,74, 0,74,156, +,+,+, 652883 LINE CR1 585 chrUn_NT_467327v1 4356 6772 CR1-F2 514 + 4356 6772 0 3 74,82,74, 0,2021,2342, +,+,+, 652884 LINE CR1 585 chrUn_NT_467327v1 7559 7715 CR1-H2 488 + 7559 7715 0 2 82,74, 0,82, +,+, 652897 LINE CR1 585 chrUn_NT_467328v1 3561 5540 GGLTR7-int 549 - 3561 5540 0 3 62,746,534, 0,672,1445, -,-,-, 652904 LTR ERV1 585 chrUn_NT_467330v1 2555 5609 GGXHOI 349 - 2555 5609 0 3 1209,166,1643, 0,1226,1411, -,-,-, 652922 Satellite W-chromosome 585 chrUn_NT_467330v1 5704 11753 GGXHOI 347 - 5704 11753 0 8 2332,641,777,212,429,794,450,240, 0,2350,3011,3811,4060,4520,5339,5809, -,-,-,-,-,-,-,-, 652923 Satellite W-chromosome 585 chrUn_NT_467330v1 11834 13299 GGXHOI 343 - 11834 13299 0 3 133,976,262, 0,168,1203, -,-,-, 652924 Satellite W-chromosome 585 chrUn_NT_467332v1 3324 6432 GGLTR7-int 405 - 3324 6432 0 4 277,949,1624,116, 0,324,1368,2992, -,-,-,-, 652933 LTR ERV1 585 chrUn_NT_467333v1 4444 6069 GGXHOI 391 + 4444 6069 0 2 1046,516, 0,1109, +,+, 652947 Satellite W-chromosome 585 chrUn_NT_467333v1 6168 7219 GGXHOI 392 + 6168 7219 0 2 472,516, 0,535, +,+, 652948 Satellite W-chromosome 585 chrUn_NT_467333v1 7318 8369 GGXHOI 392 + 7318 8369 0 2 472,516, 0,535, +,+, 652949 Satellite W-chromosome 585 chrUn_NT_467333v1 10564 12180 GGXHOI 376 + 10564 12180 0 2 468,1085, 0,531, +,+, 652953 Satellite W-chromosome 585 chrUn_NT_467334v1 9670 10228 CR1-X 406 - 9670 10228 0 3 216,132,170, 0,256,388, -,-,-, 652966 LINE CR1 585 chrUn_NT_467335v1 2728 3977 CR1-H 542 + 2728 3977 0 2 1141,108, 0,1141, +,+, 652970 LINE CR1 585 chrUn_NT_467335v1 5936 6547 CR1-H 649 + 5936 6547 0 2 456,136, 0,475, +,+, 652973 LINE CR1 585 chrUn_NT_467336v1 1707 2620 GGXHOI 357 - 1707 2620 0 2 509,342, 0,571, -,-, 652980 Satellite W-chromosome 585 chrUn_NT_467336v1 8583 9052 (CAAGG)n 598 + 8583 9052 0 3 46,223,174, 0,46,295, +,+,+, 652992 Simple_repeat Simple_repeat 585 chrUn_NT_467336v1 9167 9562 (CCTTG)n 587 + 9167 9562 0 2 183,208, 0,187, +,+, 652994 Simple_repeat Simple_repeat 585 chrUn_NT_467336v1 9676 9995 (GCCTG)n 398 + 9676 9995 0 2 98,40, 0,279, +,+, 652996 Simple_repeat Simple_repeat 585 chrUn_NT_467336v1 10403 10776 (CAAGG)n 500 + 10403 10776 0 2 179,174, 0,199, +,+, 652999 Simple_repeat Simple_repeat 585 chrUn_NT_467336v1 11673 11933 (CAAGG)n 473 + 11673 11933 0 2 24,180, 0,80, +,+, 653004 Simple_repeat Simple_repeat 585 chrUn_NT_467336v1 11986 12615 (CCTTG)n 540 + 11986 12615 0 2 259,353, 0,276, +,+, 653005 Simple_repeat Simple_repeat 585 chrUn_NT_467337v1 12851 13141 GGLTR3E1 665 + 12851 13141 0 2 171,119, 0,171, +,+, 653023 LTR ERVL 585 chrUn_NT_467338v1 4441 5620 GGXHOI 371 - 4441 5620 0 3 301,538,256, 0,331,923, -,-,-, 653026 Satellite W-chromosome 585 chrUn_NT_467338v1 5825 6247 GGXHOI 472 - 5825 6247 0 2 230,154, 0,268, -,-, 653027 Satellite W-chromosome 585 chrUn_NT_467338v1 6314 7186 GGXHOI 309 - 6314 7186 0 3 591,132,119, 0,608,753, -,-,-, 653028 Satellite W-chromosome 585 chrUn_NT_467338v1 7274 11290 GGXHOI 433 - 7274 11290 0 11 211,145,229,478,886,247,677,153,266,238,233, 0,270,430,674,1167,2065,2353,3058,3249,3533,3783, -,-,-,-,-,-,-,-,-,-,-, 653029 Satellite W-chromosome 585 chrUn_NT_467338v1 11619 13043 GGXHOI 406 - 11619 13043 0 3 792,267,335, 0,806,1089, -,-,-, 653031 Satellite W-chromosome 585 chrUn_NT_467340v1 872 4506 GGXHOI 566 - 872 4506 0 4 1482,69,157,877, 0,1801,1913,2757, -,-,-,-, 653039 Satellite W-chromosome 585 chrUn_NT_467340v1 5317 13031 GGXHOI 552 - 5317 13031 0 9 150,23,84,364,363,24,171,155,1516, 0,386,1072,1387,3208,3803,4228,4771,6198, -,-,-,-,-,-,-,-,-, 653043 Satellite W-chromosome 585 chrUn_NT_467341v1 7349 9090 GGERVL-A-int 750 - 7349 9090 0 2 1283,458, 0,1283, -,-, 653058 LTR ERVL 585 chrUn_NT_467343v1 9177 10306 CR1-B2 691 + 9177 10306 0 2 226,900, 0,229, +,+, 653074 LINE CR1 585 chrUn_NT_467344v1 2225 3990 CR1-X 408 + 2225 3990 0 4 97,171,132,263, 0,1199,1370,1502, +,+,+,+, 653080 LINE CR1 585 chrUn_NT_467344v1 11370 12480 CR1-B2 629 - 11370 12480 0 2 881,226, 0,884, -,-, 653088 LINE CR1 585 chrUn_NT_467347v1 12677 13281 GGERVL-B-int 647 + 12677 13281 0 2 467,135, 0,469, +,+, 653100 LTR ERVL 585 chrUn_NT_467350v1 8216 13243 GGXHOI 385 + 8216 13243 0 8 396,602,843,1284,563,319,152,718, 0,408,1027,1886,3182,3762,4097,4309, +,+,+,+,+,+,+,+, 653117 Satellite W-chromosome 585 chrUn_NT_467351v1 1668 5011 GGXHOI 417 - 1668 5011 0 2 1514,1811, 0,1532, -,-, 653119 Satellite W-chromosome 585 chrUn_NT_467351v1 9723 12188 GGXHOI 399 - 9723 12188 0 3 1541,689,200, 0,1561,2265, -,-,-, 653121 Satellite W-chromosome 585 chrUn_NT_467352v1 1967 2904 GGXHOI 387 + 1967 2904 0 3 374,142,351, 0,430,586, +,+,+, 653124 Satellite W-chromosome 585 chrUn_NT_467352v1 2975 7784 GGXHOI 411 + 2975 7784 0 6 410,476,1422,485,1487,432, 0,430,926,2368,2873,4377, +,+,+,+,+,+, 653125 Satellite W-chromosome 585 chrUn_NT_467352v1 7884 11289 GGXHOI 409 + 7884 11289 0 4 420,999,1612,328, 0,437,1452,3077, +,+,+,+, 653126 Satellite W-chromosome 585 chrUn_NT_467352v1 12658 13257 GGXHOI 430 + 12658 13257 0 2 444,140, 0,459, +,+, 653129 Satellite W-chromosome 585 chrUn_NT_467353v1 1760 10304 GGXHOI 540 + 1760 10304 0 15 157,192,295,191,247,193,246,194,305,222,370,194,289,291,728, 0,604,1118,1809,2322,3016,3531,4224,4729,5431,5947,6639,7154,7505,7816, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 653133 Satellite W-chromosome 585 chrUn_NT_467353v1 10417 11084 GGXHOI 464 + 10417 11084 0 2 50,363, 0,304, +,+, 653146 Satellite W-chromosome 585 chrUn_NT_467353v1 11205 12118 GGXHOI 505 + 11205 12118 0 2 149,749, 0,164, +,+, 653148 Satellite W-chromosome 585 chrUn_NT_467353v1 12132 13272 GGXHOI 584 + 12132 13272 0 2 478,258, 0,882, +,+, 653150 Satellite W-chromosome 585 chrUn_NT_467354v1 829 1867 GGXHOI 339 + 829 1867 0 2 708,318, 0,720, +,+, 653154 Satellite W-chromosome 585 chrUn_NT_467355v1 290 537 (ACCCATAGGG)n 756 - 290 537 0 2 114,18, 0,229, -,-, 653162 Satellite Satellite 585 chrUn_NT_467355v1 859 973 (G)n 756 + 859 973 0 2 30,22, 0,92, +,+, 653164 Simple_repeat Simple_repeat 585 chrUn_NT_467355v1 6172 7152 (TACTG)n 377 + 6172 7152 0 4 180,308,257,177, 0,192,533,803, +,+,+,+, 653167 Simple_repeat Simple_repeat 585 chrUn_NT_467355v1 7687 8392 (TACTG)n 365 + 7687 8392 0 3 185,180,275, 0,225,430, +,+,+, 653169 Simple_repeat Simple_repeat 585 chrUn_NT_467355v1 8479 9207 (TACTG)n 425 + 8479 9207 0 3 198,328,148, 0,225,580, +,+,+, 653170 Simple_repeat Simple_repeat 585 chrUn_NT_467357v1 386 1551 GGXHOI 514 - 386 1551 0 2 275,443, 0,722, -,-, 653195 Satellite W-chromosome 585 chrUn_NT_467357v1 1596 10947 GGXHOI 554 - 1596 10947 0 16 273,247,194,297,194,247,194,297,194,247,194,297,193,247,194,206, 0,720,1290,1881,2501,3142,3712,4303,4923,5564,6134,6725,7344,7984,8554,9145, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 653198 Satellite W-chromosome 585 chrUn_NT_467357v1 11016 12144 GGXHOI 556 - 11016 12144 0 3 39,190,207, 0,335,921, -,-,-, 653214 Satellite W-chromosome 585 chrUn_NT_467358v1 6796 8159 CR1-H 642 + 6796 8159 0 2 1245,118, 0,1245, +,+, 653226 LINE CR1 585 chrUn_NT_467358v1 10661 11283 CR1-H 676 + 10661 11283 0 2 477,139, 0,483, +,+, 653230 LINE CR1 585 chrUn_NT_467360v1 780 1340 GGXHOI 375 + 780 1340 0 2 333,182, 0,378, +,+, 653243 Satellite W-chromosome 585 chrUn_NT_467360v1 2457 3668 GGXHOI 404 + 2457 3668 0 2 138,1059, 0,152, +,+, 653247 Satellite W-chromosome 585 chrUn_NT_467360v1 3762 4453 GGXHOI 361 + 3762 4453 0 3 263,245,122, 0,303,569, +,+,+, 653248 Satellite W-chromosome 585 chrUn_NT_467360v1 4814 6677 GGXHOI 356 + 4814 6677 0 5 275,512,126,644,162, 0,315,844,1011,1701, +,+,+,+,+, 653250 Satellite W-chromosome 585 chrUn_NT_467360v1 6981 7351 GGXHOI 370 + 6981 7351 0 2 162,163, 0,207, +,+, 653252 Satellite W-chromosome 585 chrUn_NT_467360v1 7462 8036 GGXHOI 393 + 7462 8036 0 3 172,69,278, 0,186,296, +,+,+, 653253 Satellite W-chromosome 585 chrUn_NT_467360v1 8119 10713 GGXHOI 401 + 8119 10713 0 8 164,176,369,658,212,282,340,231, 0,181,376,763,1472,1703,2005,2363, +,+,+,+,+,+,+,+, 653254 Satellite W-chromosome 585 chrUn_NT_467360v1 10827 11444 GGXHOI 321 + 10827 11444 0 3 127,288,138, 0,168,479, +,+,+, 653255 Satellite W-chromosome 585 chrUn_NT_467360v1 11538 13129 GGXHOI 365 + 11538 13129 0 3 632,130,769, 0,643,822, +,+,+, 653256 Satellite W-chromosome 585 chrUn_NT_467361v1 10044 12283 GGLTR7-int 577 + 10044 12283 0 3 337,308,83, 0,1657,2156, +,+,+, 653273 LTR ERV1 585 chrUn_NT_467361v1 12461 13250 GGLTR10D-int 855 - 12461 13250 0 2 340,446, 0,343, -,-, 653277 LTR ERVK 585 chrUn_NT_467366v1 773 1593 (CCCTAA)n 624 + 773 1593 0 2 579,217, 0,603, +,+, 653357 Simple_repeat Simple_repeat 585 chrUn_NT_467366v1 1669 4217 GGXHOI 394 - 1669 4217 0 2 1267,1263, 0,1285, -,-, 653358 Satellite W-chromosome 585 chrUn_NT_467366v1 4297 6916 GGXHOI 370 - 4297 6916 0 5 385,119,418,663,901, 0,446,599,1039,1718, -,-,-,-,-, 653359 Satellite W-chromosome 585 chrUn_NT_467366v1 8605 11468 GGXHOI 388 - 8605 11468 0 4 615,646,708,828, 0,633,1298,2035, -,-,-,-, 653361 Satellite W-chromosome 585 chrUn_NT_467366v1 11677 13230 GGXHOI 343 - 11677 13230 0 3 455,303,764, 0,469,789, -,-,-, 653362 Satellite W-chromosome 585 chrUn_NT_467367v1 292 1527 CR1-D2 598 - 292 1527 0 2 444,448, 0,787, -,-, 653364 LINE CR1 585 chrUn_NT_467368v1 4971 5616 G-rich 434 + 4971 5616 0 2 38,560, 0,85, +,+, 653397 Low_complexity Low_complexity 585 chrUn_NT_467370v1 8300 9421 CR1-B2 671 + 8300 9421 0 2 220,898, 0,223, +,+, 653426 LINE CR1 585 chrUn_NT_467371v1 558 3393 GGXHOI 596 - 558 3393 0 4 572,299,148,573, 0,1246,1556,2262, -,-,-,-, 653435 Satellite W-chromosome 585 chrUn_NT_467371v1 5250 13239 GGXHOI 598 - 5250 13239 0 14 407,299,148,299,148,413,148,414,148,457,299,146,123,109, 0,1080,1390,2212,2522,3228,3652,4359,4784,5604,6734,7044,7739,7880, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 653441 Satellite W-chromosome 585 chrUn_NT_467374v1 1206 5194 GGXHOI 551 - 1206 5194 0 8 147,282,194,247,194,297,194,161, 0,159,764,1406,1976,2567,3187,3827, -,-,-,-,-,-,-,-, 653475 Satellite W-chromosome 585 chrUn_NT_467374v1 5264 7097 GGXHOI 552 - 5264 7097 0 4 26,193,373,289, 0,336,848,1544, -,-,-,-, 653482 Satellite W-chromosome 585 chrUn_NT_467374v1 7108 8749 GGXHOI 545 - 7108 8749 0 4 575,194,61,128, 0,900,1421,1513, -,-,-,-, 653487 Satellite W-chromosome 585 chrUn_NT_467374v1 9153 11423 GGXHOI 520 - 9153 11423 0 4 302,371,191,445, 0,504,1195,1825, -,-,-,-, 653491 Satellite W-chromosome 585 chrUn_NT_467374v1 11466 12934 GGXHOI 546 - 11466 12934 0 2 196,991, 0,477, -,-, 653496 Satellite W-chromosome 585 chrUn_NT_467377v1 5513 13229 GGXHOI 441 + 5513 13229 0 10 2152,439,815,318,1560,313,337,133,551,896, 0,2173,2629,3501,3835,5411,5745,6097,6252,6820, +,+,+,+,+,+,+,+,+,+, 653521 Satellite W-chromosome 585 chrUn_NT_467378v1 11293 12410 CR1-B2 686 - 11293 12410 0 2 917,200, 0,917, -,-, 653534 LINE CR1 585 chrUn_NT_467379v1 608 1891 (CCTTG)n 544 + 608 1891 0 3 353,48,107, 0,543,1176, +,+,+, 653538 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 1960 2670 (CCTTG)n 554 + 1960 2670 0 3 116,9,52, 0,295,658, +,+,+, 653542 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 2726 3101 (CCTTG)n 624 + 2726 3101 0 2 181,183, 0,192, +,+, 653547 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 3170 3546 (CCTTG)n 593 + 3170 3546 0 2 181,195, 0,181, +,+, 653549 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 3648 4056 (CCTTG)n 576 + 3648 4056 0 2 194,214, 0,194, +,+, 653551 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 4570 5292 (CCTTG)n 638 + 4570 5292 0 4 178,43,38,250, 0,199,418,472, +,+,+,+, 653555 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 5602 6211 (CCTTG)n 596 + 5602 6211 0 3 185,213,211, 0,185,398, +,+,+, 653560 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 6331 6923 (CCTTG)n 618 + 6331 6923 0 2 184,408, 0,184, +,+, 653562 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 7594 8138 (GCCTG)n 512 + 7594 8138 0 2 126,196, 0,348, +,+, 653569 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 7720 8184 (CCTTG)n 596 + 7720 8184 0 2 222,242, 0,222, +,+, 653570 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 8149 9037 (CCTTG)n 604 + 8149 9037 0 3 232,27,416, 0,419,472, +,+,+, 653571 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 9060 9502 (CCTTG)n 539 + 9060 9502 0 2 221,221, 0,221, +,+, 653574 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 9585 11535 (CCTTG)n 589 + 9585 11535 0 7 221,230,142,118,288,184,189, 0,239,469,1112,1230,1540,1761, +,+,+,+,+,+,+, 653576 Simple_repeat Simple_repeat 585 chrUn_NT_467379v1 12305 13230 (CCTTG)n 543 + 12305 13230 0 4 145,135,182,233, 0,291,477,692, +,+,+,+, 653583 Simple_repeat Simple_repeat 585 chrUn_NT_467380v1 2988 8564 GGXHOI 419 - 2988 8564 0 4 733,1107,555,3090, 0,752,1905,2486, -,-,-,-, 653586 Satellite W-chromosome 585 chrUn_NT_467380v1 8704 12710 GGXHOI 406 - 8704 12710 0 4 331,564,882,2187, 0,344,923,1819, -,-,-,-, 653587 Satellite W-chromosome 585 chrUn_NT_467381v1 3613 5533 GGLTR7-int 642 - 3613 5533 0 4 33,74,656,525, 0,34,739,1395, -,-,-,-, 653592 LTR ERV1 585 chrUn_NT_467382v1 2057 3072 GGXHOI 360 - 2057 3072 0 2 520,432, 0,583, -,-, 653600 Satellite W-chromosome 585 chrUn_NT_467382v1 3477 5336 GGXHOI 320 - 3477 5336 0 2 144,1654, 0,205, -,-, 653601 Satellite W-chromosome 585 chrUn_NT_467382v1 5401 11002 GGXHOI 368 - 5401 11002 0 5 2357,956,1737,270,175, 0,2377,3353,5105,5426, -,-,-,-,-, 653602 Satellite W-chromosome 585 chrUn_NT_467382v1 11104 13226 GGXHOI 378 - 11104 13226 0 3 295,297,1461, 0,307,661, -,-,-, 653603 Satellite W-chromosome 585 chrUn_NT_467383v1 5232 6678 CR1-X 476 - 5232 6678 0 3 81,175,57, 0,81,1389, -,-,-, 653607 LINE CR1 585 chrUn_NT_467386v1 10885 11234 CR1-C 399 + 10885 11234 0 2 159,120, 0,229, +,+, 653642 LINE CR1 585 chrUn_NT_467387v1 1850 7825 GGXHOI 537 - 1850 7825 0 9 397,14,663,126,711,373,1278,142,537, 0,629,657,1364,1511,2799,3525,5279,5438, -,-,-,-,-,-,-,-,-, 653647 Satellite W-chromosome 585 chrUn_NT_467387v1 7772 8139 Sat-CR1_GG 138 - 7772 8139 0 2 97,110, 0,257, -,-, 653652 Satellite Satellite 585 chrUn_NT_467387v1 8057 13207 GGXHOI 553 - 8057 13207 0 11 167,153,14,491,578,138,52,177,329,712,428, 0,194,582,610,1456,2048,2399,2869,3241,3583,4722, -,-,-,-,-,-,-,-,-,-,-, 653654 Satellite W-chromosome 585 chrUn_NT_467388v1 6365 7694 GGXHOI 409 + 6365 7694 0 3 346,795,146, 0,366,1183, +,+,+, 653663 Satellite W-chromosome 585 chrUn_NT_467388v1 8208 9877 GGXHOI 385 + 8208 9877 0 2 805,808, 0,861, +,+, 653665 Satellite W-chromosome 585 chrUn_NT_467388v1 9960 12505 GGXHOI 363 + 9960 12505 0 3 387,1185,898, 0,443,1647, +,+,+, 653666 Satellite W-chromosome 585 chrUn_NT_467389v1 3407 6154 GGERVL-B-int 706 - 3407 6154 0 2 920,1827, 0,920, -,-, 653670 LTR ERVL 585 chrUn_NT_467389v1 8042 9089 GGLTR7A 782 - 8042 9089 0 2 588,458, 0,589, -,-, 653672 LTR ERV1 585 chrUn_NT_467389v1 9620 10046 GGLTR7A 876 - 9620 10046 0 2 251,175, 0,251, -,-, 653674 LTR ERV1 585 chrUn_NT_467389v1 11229 12135 (CAAGG)n 558 + 11229 12135 0 3 210,22,195, 0,388,711, +,+,+, 653682 Simple_repeat Simple_repeat 585 chrUn_NT_467390v1 6308 6764 CR1-H 672 + 6308 6764 0 2 296,160, 0,296, +,+, 653694 LINE CR1 585 chrUn_NT_467390v1 8903 9527 CR1-H 679 + 8903 9527 0 2 466,139, 0,485, +,+, 653697 LINE CR1 585 chrUn_NT_467391v1 10128 11742 GGXHOI 370 - 10128 11742 0 2 507,1044, 0,570, -,-, 653710 Satellite W-chromosome 585 chrUn_NT_467392v1 2850 13187 GGXHOI 390 - 2850 13187 0 5 1314,3278,2662,1309,1663, 0,1331,4625,7308,8674, -,-,-,-,-, 653717 Satellite W-chromosome 585 chrUn_NT_467393v1 4467 6041 GGXHOI 356 - 4467 6041 0 2 1002,555, 0,1019, -,-, 653723 Satellite W-chromosome 585 chrUn_NT_467394v1 649 1525 GGXHOI 444 + 649 1525 0 2 795,58, 0,818, +,+, 653734 Satellite W-chromosome 585 chrUn_NT_467394v1 3279 3797 GGXHOI 352 - 3279 3797 0 2 101,399, 0,119, -,-, 653741 Satellite W-chromosome 585 chrUn_NT_467394v1 3887 12818 GGXHOI 355 - 3887 12818 0 7 2324,1754,900,1753,833,841,405, 0,2340,4110,5031,6805,7654,8526, -,-,-,-,-,-,-, 653742 Satellite W-chromosome 585 chrUn_NT_467395v1 1876 5630 GGXHOI 572 - 1876 5630 0 5 664,50,205,148,1189, 0,1434,1526,1742,2565, -,-,-,-,-, 653748 Satellite W-chromosome 585 chrUn_NT_467395v1 6573 8581 GGXHOI 578 - 6573 8581 0 4 17,248,148,515, 0,495,792,1493, -,-,-,-, 653757 Satellite W-chromosome 585 chrUn_NT_467395v1 8710 13178 GGXHOI 568 - 8710 13178 0 5 20,458,458,461,509, 0,568,1689,2820,3959, -,-,-,-,-, 653760 Satellite W-chromosome 585 chrUn_NT_467397v1 10258 11613 CR1-H 659 + 10258 11613 0 2 1243,112, 0,1243, +,+, 653774 LINE CR1 585 chrUn_NT_467398v1 1439 3127 (CCTCG)n 541 + 1439 3127 0 3 218,137,1135, 0,405,553, +,+,+, 653785 Simple_repeat Simple_repeat 585 chrUn_NT_467398v1 2801 3154 (CCTTG)n 534 + 2801 3154 0 2 119,54, 0,299, +,+, 653787 Simple_repeat Simple_repeat 585 chrUn_NT_467398v1 3450 4267 (CCTCG)n 627 + 3450 4267 0 4 188,209,217,203, 0,188,397,614, +,+,+,+, 653791 Simple_repeat Simple_repeat 585 chrUn_NT_467398v1 5234 7661 GGERV10_LTR 848 + 5234 7661 0 2 41,38, 0,2389, +,+, 653796 LTR ERVL 585 chrUn_NT_467398v1 5276 7495 GGLTR10D-int 924 + 5276 7495 0 2 1852,364, 0,1855, +,+, 653797 LTR ERVK 585 chrUn_NT_467398v1 7673 10135 GGLTR7-int 596 - 7673 10135 0 2 792,339, 0,2123, -,-, 653798 LTR ERV1 585 chrUn_NT_467400v1 2751 3778 GGXHOI 437 + 2751 3778 0 3 144,437,417, 0,156,610, +,+,+, 653810 Satellite W-chromosome 585 chrUn_NT_467400v1 4937 7176 GGXHOI 548 + 4937 7176 0 5 202,300,288,305,129, 0,444,1076,1612,2110, +,+,+,+,+, 653813 Satellite W-chromosome 585 chrUn_NT_467400v1 7253 8311 GGXHOI 528 + 7253 8311 0 2 395,301, 0,757, +,+, 653818 Satellite W-chromosome 585 chrUn_NT_467400v1 9426 10511 GGXHOI 586 + 9426 10511 0 2 201,505, 0,580, +,+, 653823 Satellite W-chromosome 585 chrUn_NT_467400v1 10586 11619 GGXHOI 482 + 10586 11619 0 2 182,600, 0,433, +,+, 653825 Satellite W-chromosome 585 chrUn_NT_467400v1 11691 13161 GGXHOI 460 + 11691 13161 0 2 205,1030, 0,440, +,+, 653827 Satellite W-chromosome 585 chrUn_NT_467401v1 2112 3163 GGXHOI 392 + 2112 3163 0 2 472,516, 0,535, +,+, 653832 Satellite W-chromosome 585 chrUn_NT_467401v1 3262 4313 GGXHOI 392 + 3262 4313 0 2 472,516, 0,535, +,+, 653833 Satellite W-chromosome 585 chrUn_NT_467401v1 4412 5463 GGXHOI 392 + 4412 5463 0 2 472,516, 0,535, +,+, 653834 Satellite W-chromosome 585 chrUn_NT_467401v1 5562 7099 GGXHOI 378 + 5562 7099 0 2 472,1003, 0,534, +,+, 653835 Satellite W-chromosome 585 chrUn_NT_467401v1 7842 9907 GGXHOI 389 + 7842 9907 0 2 1487,515, 0,1550, +,+, 653837 Satellite W-chromosome 585 chrUn_NT_467401v1 12384 13164 GGXHOI 380 + 12384 13164 0 2 385,332, 0,448, +,+, 653842 Satellite W-chromosome 585 chrUn_NT_467403v1 1805 6739 GGXHOI 603 - 1805 6739 0 7 407,458,458,299,148,234,148, 0,1081,2213,3344,3654,4541,4786, -,-,-,-,-,-,-, 653912 Satellite W-chromosome 585 chrUn_NT_467403v1 7463 9966 GGXHOI 592 - 7463 9966 0 4 247,148,456,297, 0,258,1080,2206, -,-,-,-, 653918 Satellite W-chromosome 585 chrUn_NT_467403v1 9977 13161 GGXHOI 576 - 9977 13161 0 4 1058,205,438,138, 0,1070,1911,3046, -,-,-,-, 653922 Satellite W-chromosome 585 chrUn_NT_467405v1 8500 9163 GGERVL-B-int 694 + 8500 9163 0 2 469,192, 0,471, +,+, 653943 LTR ERVL 585 chrUn_NT_467405v1 9166 12964 GGLTR7A 750 + 9166 12964 0 2 582,3216, 0,582, +,+, 653944 LTR ERV1 585 chrUn_NT_467407v1 1556 3347 (TAGA)n 734 + 1556 3347 0 4 165,233,181,819, 0,445,698,972, +,+,+,+, 653986 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 950 1759 (CCTTG)n 524 + 950 1759 0 2 286,503, 0,306, +,+, 654012 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 3121 3624 (CCTTG)n 543 + 3121 3624 0 2 259,237, 0,266, +,+, 654018 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 4283 4654 (CAAGG)n 459 + 4283 4654 0 2 185,171, 0,200, +,+, 654020 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 4757 5525 (CCTTG)n 527 + 4757 5525 0 3 227,268,198, 0,247,570, +,+,+, 654021 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 6155 6540 (CAAGG)n 497 + 6155 6540 0 2 189,170, 0,215, +,+, 654024 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 6579 7397 (CCTTG)n 480 + 6579 7397 0 2 364,430, 0,388, +,+, 654025 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 8454 9005 (CCTTG)n 492 + 8454 9005 0 2 295,256, 0,295, +,+, 654027 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 9666 10340 (CAAGG)n 558 + 9666 10340 0 2 251,234, 0,440, +,+, 654029 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 10645 11148 (CCTTG)n 543 + 10645 11148 0 2 259,237, 0,266, +,+, 654033 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 11548 12220 (CAAGG)n 558 + 11548 12220 0 2 251,232, 0,440, +,+, 654036 Simple_repeat Simple_repeat 585 chrUn_NT_467409v1 12220 12731 (CCTTG)n 526 + 12220 12731 0 2 272,62, 0,449, +,+, 654038 Simple_repeat Simple_repeat 585 chrUn_NT_467410v1 4915 8647 CR1-C2 567 + 4915 8647 0 5 181,370,285,470,217, 0,181,2338,3045,3515, +,+,+,+,+, 654049 LINE CR1 585 chrUn_NT_467410v1 9493 13116 CR1-C 653 + 9493 13116 0 4 192,390,294,461, 0,192,2412,3162, +,+,+,+, 654057 LINE CR1 585 chrUn_NT_467411v1 1236 12976 GGXHOI 563 + 1236 12976 0 5 665,74,274,24,412, 0,707,10409,10724,11328, +,+,+,+,+, 654063 Satellite W-chromosome 585 chrUn_NT_467412v1 5364 5928 CR1-X 454 + 5364 5928 0 3 170,132,220, 0,170,344, +,+,+, 654073 LINE CR1 585 chrUn_NT_467413v1 944 10834 GGXHOI 399 - 944 10834 0 12 1948,355,3560,437,356,309,686,519,327,433,350,377, 0,1966,2335,5911,6366,6744,7071,7774,8315,8689,9139,9513, -,-,-,-,-,-,-,-,-,-,-,-, 654084 Satellite W-chromosome 585 chrUn_NT_467413v1 11260 13142 GGXHOI 405 - 11260 13142 0 3 1344,351,146, 0,1362,1736, -,-,-, 654086 Satellite W-chromosome 585 chrUn_NT_467414v1 3812 7107 CR1-Y 711 - 3812 7107 0 3 589,917,807, 0,940,2488, -,-,-, 654093 LINE CR1 585 chrUn_NT_467414v1 7141 8836 GGERVL18-int 678 - 7141 8836 0 2 278,1413, 0,282, -,-, 654094 LTR ERVL 585 chrUn_NT_467414v1 9982 12620 GGERV28_I-int 196 - 9982 12620 0 2 417,1059, 0,1579, -,-, 654096 LTR ERVK 585 chrUn_NT_467415v1 6222 6530 CR1-X 506 + 6222 6530 0 3 171,77,50, 0,171,258, +,+,+, 654105 LINE CR1 585 chrUn_NT_467416v1 10490 13115 GGXHOI 368 + 10490 13115 0 3 152,1905,479, 0,207,2146, +,+,+, 654113 Satellite W-chromosome 585 chrUn_NT_467417v1 1198 2949 CR1-X 430 - 1198 2949 0 4 220,132,157,97, 0,262,405,1654, -,-,-,-, 654117 LINE CR1 585 chrUn_NT_467417v1 6984 8109 CR1-B2 707 + 6984 8109 0 2 225,897, 0,228, +,+, 654120 LINE CR1 585 chrUn_NT_467418v1 6791 8575 GGERVL-A-int 678 + 6791 8575 0 2 465,1319, 0,465, +,+, 654129 LTR ERVL 585 chrUn_NT_467419v1 5078 10669 GGXHOI 507 - 5078 10669 0 7 1110,760,152,1399,175,826,740, 0,1122,1918,2133,3584,3971,4851, -,-,-,-,-,-,-, 654135 Satellite W-chromosome 585 chrUn_NT_467419v1 10786 13055 GGXHOI 522 - 10786 13055 0 3 226,197,1784, 0,273,485, -,-,-, 654137 Satellite W-chromosome 585 chrUn_NT_467421v1 632 11071 GGXHOI 388 - 632 11071 0 15 1119,250,271,262,1105,549,305,1575,388,1072,288,1027,153,390,1407, 0,1135,1407,1695,1982,3099,3670,3998,5585,5996,7092,7402,8454,8619,9032, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 654140 Satellite W-chromosome 585 chrUn_NT_467421v1 11327 13118 GGXHOI 421 - 11327 13118 0 3 64,143,1522, 0,103,269, -,-,-, 654141 Satellite W-chromosome 585 chrUn_NT_467422v1 3915 5182 (ACCCCATAGGG)n 438 - 3915 5182 0 5 164,164,158,474,147, 0,210,409,589,1120, -,-,-,-,-, 654145 Satellite Satellite 585 chrUn_NT_467423v1 7175 7523 (TG)n 684 + 7175 7523 0 2 132,196, 0,152, +,+, 654163 Simple_repeat Simple_repeat 585 chrUn_NT_467423v1 7539 7956 (TG)n 602 + 7539 7956 0 2 179,238, 0,179, +,+, 654165 Simple_repeat Simple_repeat 585 chrUn_NT_467423v1 8054 8414 (TG)n 615 + 8054 8414 0 2 216,128, 0,232, +,+, 654167 Simple_repeat Simple_repeat 585 chrUn_NT_467424v1 1825 3550 GGXHOI 291 - 1825 3550 0 3 125,1106,419, 0,187,1306, -,-,-, 654175 Satellite W-chromosome 585 chrUn_NT_467424v1 3673 5878 GGXHOI 394 - 3673 5878 0 5 114,398,186,580,818, 0,130,541,770,1387, -,-,-,-,-, 654176 Satellite W-chromosome 585 chrUn_NT_467424v1 6828 12679 GGXHOI 405 - 6828 12679 0 18 243,68,723,693,141,378,925,267,81,216,82,143,124,171,131,131,699,230, 0,281,365,1120,1856,2013,2407,3349,3628,3723,3952,4046,4217,4360,4546,4726,4872,5621, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 654179 Satellite W-chromosome 585 chrUn_NT_467425v1 2334 3045 GGXHOI 343 - 2334 3045 0 3 414,137,129, 0,427,582, -,-,-, 654183 Satellite W-chromosome 585 chrUn_NT_467425v1 3157 4917 GGXHOI 330 - 3157 4917 0 3 980,575,120, 0,1042,1640, -,-,-, 654184 Satellite W-chromosome 585 chrUn_NT_467425v1 5241 6530 GGXHOI 382 - 5241 6530 0 5 116,64,178,475,321, 0,157,251,467,968, -,-,-,-,-, 654185 Satellite W-chromosome 585 chrUn_NT_467425v1 6595 6954 GGXHOI 337 - 6595 6954 0 2 199,124, 0,235, -,-, 654186 Satellite W-chromosome 585 chrUn_NT_467425v1 7066 7522 GGXHOI 319 - 7066 7522 0 2 166,248, 0,208, -,-, 654187 Satellite W-chromosome 585 chrUn_NT_467425v1 8189 8813 GGXHOI 386 - 8189 8813 0 3 219,132,243, 0,236,381, -,-,-, 654190 Satellite W-chromosome 585 chrUn_NT_467425v1 9623 12744 GGXHOI 395 - 9623 12744 0 6 104,597,62,163,974,1073, 0,167,776,873,1051,2048, -,-,-,-,-,-, 654192 Satellite W-chromosome 585 chrUn_NT_467427v1 1558 2062 GGXHOI 351 - 1558 2062 0 2 380,108, 0,396, -,-, 654204 Satellite W-chromosome 585 chrUn_NT_467427v1 3906 5157 GGXHOI 381 - 3906 5157 0 2 605,591, 0,660, -,-, 654207 Satellite W-chromosome 585 chrUn_NT_467427v1 6146 7093 GGXHOI 349 - 6146 7093 0 2 624,265, 0,682, -,-, 654209 Satellite W-chromosome 585 chrUn_NT_467427v1 8170 10328 GGXHOI 327 - 8170 10328 0 2 1349,790, 0,1368, -,-, 654212 Satellite W-chromosome 585 chrUn_NT_467428v1 7207 10146 GGLTR7-int 428 - 7207 10146 0 4 277,949,1444,17, 0,324,1368,2922, -,-,-,-, 654219 LTR ERV1 585 chrUn_NT_467431v1 1342 1592 CR1-X 429 - 1342 1592 0 2 82,153, 0,97, -,-, 654235 LINE CR1 585 chrUn_NT_467431v1 7132 8254 CR1-B2 701 - 7132 8254 0 2 897,222, 0,900, -,-, 654239 LINE CR1 585 chrUn_NT_467432v1 2264 2518 GGXHOI 408 - 2264 2518 0 2 121,107, 0,147, -,-, 654246 Satellite W-chromosome 585 chrUn_NT_467432v1 2614 4862 GGXHOI 349 - 2614 4862 0 5 588,624,125,479,340, 0,601,1242,1410,1908, -,-,-,-,-, 654247 Satellite W-chromosome 585 chrUn_NT_467434v1 519 2965 GGXHOI 403 + 519 2965 0 3 912,733,745, 0,926,1701, +,+,+, 654261 Satellite W-chromosome 585 chrUn_NT_467434v1 3074 11464 GGXHOI 422 + 3074 11464 0 5 1176,609,3810,1257,1417, 0,1195,1846,5698,6973, +,+,+,+,+, 654262 Satellite W-chromosome 585 chrUn_NT_467434v1 11721 13095 GGXHOI 369 + 11721 13095 0 2 388,945, 0,429, +,+, 654263 Satellite W-chromosome 585 chrUn_NT_467435v1 8985 13105 CR1-D2 530 - 8985 13105 0 2 571,265, 0,3855, -,-, 654270 LINE CR1 585 chrUn_NT_467435v1 10228 12838 CR1-D 685 - 10228 12838 0 3 1640,882,88, 0,1640,2522, -,-,-, 654271 LINE CR1 585 chrUn_NT_467437v1 2521 3530 GGXHOI 409 - 2521 3530 0 2 104,890, 0,119, -,-, 654276 Satellite W-chromosome 585 chrUn_NT_467437v1 5154 8752 GGXHOI 381 - 5154 8752 0 6 141,968,427,64,968,950, 0,156,1136,1583,1662,2648, -,-,-,-,-,-, 654278 Satellite W-chromosome 585 chrUn_NT_467437v1 8847 10820 GGXHOI 396 - 8847 10820 0 3 333,554,1004, 0,395,969, -,-,-, 654279 Satellite W-chromosome 585 chrUn_NT_467437v1 10918 12284 GGXHOI 373 - 10918 12284 0 2 942,368, 0,998, -,-, 654280 Satellite W-chromosome 585 chrUn_NT_467438v1 9159 9590 (CCCCATTGGG)n 507 + 9159 9590 0 3 134,124,130, 0,164,301, +,+,+, 654290 Satellite Satellite 585 chrUn_NT_467439v1 5618 6765 GGXHOI 415 + 5618 6765 0 2 586,545, 0,602, +,+, 654297 Satellite W-chromosome 585 chrUn_NT_467439v1 6875 13073 GGXHOI 399 + 6875 13073 0 3 2312,2274,1582, 0,2324,4616, +,+,+, 654298 Satellite W-chromosome 585 chrUn_NT_467440v1 6164 6783 CR1-H 608 - 6164 6783 0 2 138,462, 0,157, -,-, 654303 LINE CR1 585 chrUn_NT_467441v1 6764 6856 A-rich 400 + 6764 6856 0 2 22,11, 0,81, +,+, 654329 Low_complexity Low_complexity 585 chrUn_NT_467442v1 6351 6918 CR1-X 385 + 6351 6918 0 3 173,131,263, 0,173,304, +,+,+, 654350 LINE CR1 585 chrUn_NT_467443v1 7678 9303 GGXHOI 388 + 7678 9303 0 2 1046,516, 0,1109, +,+, 654365 Satellite W-chromosome 585 chrUn_NT_467444v1 840 2330 GGXHOI 371 + 840 2330 0 3 309,151,993, 0,324,497, +,+,+, 654373 Satellite W-chromosome 585 chrUn_NT_467444v1 2413 2911 GGXHOI 380 + 2413 2911 0 3 197,140,90, 0,252,408, +,+,+, 654374 Satellite W-chromosome 585 chrUn_NT_467444v1 3717 13025 GGXHOI 402 + 3717 13025 0 16 582,306,538,632,224,536,554,719,150,296,1409,587,1125,305,545,535, 0,605,929,1484,2137,2383,2935,3506,4237,4409,4717,6142,6741,7889,8216,8773, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 654377 Satellite W-chromosome 585 chrUn_NT_467445v1 5664 6291 CR1-H 684 - 5664 6291 0 2 139,469, 0,158, -,-, 654382 LINE CR1 585 chrUn_NT_467445v1 8435 8891 CR1-H 672 - 8435 8891 0 2 162,294, 0,162, -,-, 654386 LINE CR1 585 chrUn_NT_467446v1 9782 13026 GGXHOI 376 + 9782 13026 0 4 385,1082,1084,506, 0,447,1591,2738, +,+,+,+, 654404 Satellite W-chromosome 585 chrUn_NT_467447v1 12777 13041 (TTAGGG)n 552 + 12777 13041 0 2 81,172, 0,92, +,+, 654406 Simple_repeat Simple_repeat 585 chrUn_NT_467448v1 12243 12556 GGXHOI 394 + 12243 12556 0 2 139,143, 0,170, +,+, 654409 Satellite W-chromosome 585 chrUn_NT_467449v1 1309 1632 GGERV10_LTR 524 - 1309 1632 0 2 158,68, 0,255, -,-, 654413 LTR ERVL 585 chrUn_NT_467449v1 2848 5581 GGLTR7B 388 - 2848 5581 0 4 58,104,1592,212, 0,165,881,2521, -,-,-,-, 654414 LTR ERV1 585 chrUn_NT_467449v1 5674 6842 CR1-H 758 - 5674 6842 0 2 633,535, 0,633, -,-, 654417 LINE CR1 585 chrUn_NT_467449v1 11042 11379 ENS3-int 810 + 11042 11379 0 2 37,296, 0,41, +,+, 654422 LTR ERVL 585 chrUn_NT_467449v1 11391 13094 GGERVL-B-int 584 + 11391 13094 0 2 413,1288, 0,415, +,+, 654423 LTR ERVL 585 chrUn_NT_467450v1 7689 8198 CR1-H 750 - 7689 8198 0 2 36,455, 0,54, -,-, 654431 LINE CR1 585 chrUn_NT_467450v1 11008 11465 CR1-H 673 - 11008 11465 0 2 161,296, 0,161, -,-, 654435 LINE CR1 585 chrUn_NT_467451v1 1622 2003 (CAAGG)n 653 + 1622 2003 0 2 176,205, 0,176, +,+, 654447 Simple_repeat Simple_repeat 585 chrUn_NT_467451v1 8532 9265 G-rich 364 + 8532 9265 0 2 118,586, 0,147, +,+, 654456 Low_complexity Low_complexity 585 chrUn_NT_467452v1 2368 4912 GGXHOI 375 - 2368 4912 0 3 1167,940,362, 0,1223,2182, -,-,-, 654461 Satellite W-chromosome 585 chrUn_NT_467452v1 5040 13063 GGXHOI 395 - 5040 13063 0 12 557,1170,474,839,690,521,447,1171,359,439,689,439, 0,577,1766,2254,3113,3822,4359,4852,6038,6417,6875,7584, -,-,-,-,-,-,-,-,-,-,-,-, 654462 Satellite W-chromosome 585 chrUn_NT_467453v1 2776 6504 GGXHOI 323 - 2776 6504 0 4 1853,1460,181,122, 0,1875,3384,3606, -,-,-,-, 654464 Satellite W-chromosome 585 chrUn_NT_467453v1 6642 10504 GGXHOI 342 - 6642 10504 0 8 215,135,1627,255,142,705,444,184, 0,228,379,2055,2323,2489,3217,3678, -,-,-,-,-,-,-,-, 654465 Satellite W-chromosome 585 chrUn_NT_467453v1 10886 12852 GGXHOI 336 - 10886 12852 0 3 1100,270,560, 0,1118,1406, -,-,-, 654467 Satellite W-chromosome 585 chrUn_NT_467455v1 7751 9005 GGLTR7-int 654 + 7751 9005 0 4 177,87,74,33, 0,177,1146,1221, +,+,+,+, 654477 LTR ERV1 585 chrUn_NT_467456v1 3956 7069 GGLTR7-int 415 - 3956 7069 0 4 277,949,1629,116, 0,324,1368,2997, -,-,-,-, 654482 LTR ERV1 585 chrUn_NT_467457v1 2684 6195 GGXHOI 356 + 2684 6195 0 5 805,265,1050,555,681, 0,823,1109,2217,2830, +,+,+,+,+, 654494 Satellite W-chromosome 585 chrUn_NT_467457v1 6262 7630 GGXHOI 377 + 6262 7630 0 2 878,432, 0,936, +,+, 654495 Satellite W-chromosome 585 chrUn_NT_467457v1 8633 11020 GGXHOI 347 + 8633 11020 0 2 1419,912, 0,1475, +,+, 654497 Satellite W-chromosome 585 chrUn_NT_467459v1 370 2209 GGLTR7-int 564 - 370 2209 0 3 71,652,528, 0,659,1311, -,-,-, 654524 LTR ERV1 585 chrUn_NT_467460v1 942 4051 GGLTR7-int 423 - 942 4051 0 4 277,949,1625,116, 0,324,1368,2993, -,-,-,-, 654532 LTR ERV1 585 chrUn_NT_467460v1 5577 5791 G-rich 317 + 5577 5791 0 2 112,87, 0,127, +,+, 654534 Low_complexity Low_complexity 585 chrUn_NT_467460v1 6562 6655 CR1-E 632 + 6562 6655 0 2 49,44, 0,49, +,+, 654536 LINE CR1 585 chrUn_NT_467466v1 7195 7819 CR1-H 683 - 7195 7819 0 2 139,479, 0,145, -,-, 654611 LINE CR1 585 chrUn_NT_467466v1 11184 11641 CR1-H 677 - 11184 11641 0 2 163,294, 0,163, -,-, 654615 LINE CR1 585 chrUn_NT_467469v1 3626 4080 CR1-H 674 - 3626 4080 0 2 162,292, 0,162, -,-, 654624 LINE CR1 585 chrUn_NT_467470v1 8663 12132 GGLTR7-int 379 - 8663 12132 0 6 274,944,1240,11,41,103, 0,320,1361,2674,2857,3366, -,-,-,-,-,-, 654640 LTR ERV1 585 chrUn_NT_467471v1 2083 2597 GGLTR3E1 659 + 2083 2597 0 2 330,168, 0,346, +,+, 654643 LTR ERVL 585 chrUn_NT_467471v1 3046 3535 GGLTR3F2 604 + 3046 3535 0 2 232,213, 0,276, +,+, 654644 LTR ERVL 585 chrUn_NT_467471v1 4397 5533 CR1-F 803 - 4397 5533 0 2 293,343, 0,793, -,-, 654647 LINE CR1 585 chrUn_NT_467472v1 6743 11460 CR1-D2 546 + 6743 11460 0 2 829,577, 0,4140, +,+, 654659 LINE CR1 585 chrUn_NT_467472v1 7558 10190 CR1-D 659 + 7558 10190 0 3 112,884,1636, 0,112,996, +,+,+, 654660 LINE CR1 585 chrUn_NT_467473v1 9389 11549 GGLTR7-int 627 + 9389 11549 0 2 335,525, 0,1635, +,+, 654675 LTR ERV1 585 chrUn_NT_467473v1 11564 13050 GGLTR10D-int 952 - 11564 13050 0 2 338,1145, 0,341, -,-, 654678 LTR ERVK 585 chrUn_NT_467476v1 10359 10859 GGLTR3F2 616 + 10359 10859 0 2 230,219, 0,281, +,+, 654693 LTR ERVL 585 chrUn_NT_467477v1 3597 5148 Sat-CR1_GG 180 + 3597 5148 0 2 673,679, 0,872, +,+, 654702 Satellite Satellite 585 chrUn_NT_467477v1 6587 8398 Sat-CR1_GG 182 + 6587 8398 0 3 94,433,916, 0,262,895, +,+,+, 654706 Satellite Satellite 585 chrUn_NT_467479v1 2711 3334 CR1-H 377 + 2711 3334 0 2 209,378, 0,245, +,+, 654734 LINE CR1 585 chrUn_NT_467479v1 5213 5836 CR1-H 374 + 5213 5836 0 2 209,378, 0,245, +,+, 654737 LINE CR1 585 chrUn_NT_467479v1 7716 8340 CR1-H 378 + 7716 8340 0 2 209,379, 0,245, +,+, 654740 LINE CR1 585 chrUn_NT_467479v1 10220 10844 CR1-H 378 + 10220 10844 0 2 209,379, 0,245, +,+, 654743 LINE CR1 585 chrUn_NT_467481v1 5419 7223 Sat-CR1_GG 154 - 5419 7223 0 2 685,887, 0,917, -,-, 654762 Satellite Satellite 585 chrUn_NT_467481v1 8012 11337 GGXHOI 548 - 8012 11337 0 8 476,83,18,22,122,32,137,149, 0,790,891,1145,1918,2443,3009,3176, -,-,-,-,-,-,-,-, 654766 Satellite W-chromosome 585 chrUn_NT_467484v1 9277 9711 Sat-CR1_GG 104 - 9277 9711 0 2 107,98, 0,336, -,-, 654809 Satellite Satellite 585 chrUn_NT_467485v1 11253 11470 CR1-H 650 + 11253 11470 0 2 95,115, 0,102, +,+, 654826 LINE CR1 585 chrUn_NT_467486v1 3118 3434 GGXHOI 379 - 3118 3434 0 2 142,156, 0,160, -,-, 654829 Satellite W-chromosome 585 chrUn_NT_467486v1 3543 13030 GGXHOI 431 - 3543 13030 0 10 1355,1277,1712,354,643,150,518,2498,365,352, 0,1372,2665,4395,4766,5451,5655,6230,8752,9135, -,-,-,-,-,-,-,-,-,-, 654830 Satellite W-chromosome 585 chrUn_NT_467487v1 1566 1922 (CAGGC)n 554 + 1566 1922 0 2 147,26, 0,330, +,+, 654837 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 2359 3807 (CAAGG)n 626 + 2359 3807 0 3 214,693,94, 0,490,1354, +,+,+, 654842 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 4109 4663 (CAAGG)n 586 + 4109 4663 0 2 295,77, 0,477, +,+, 654849 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 5398 5955 (CAAGG)n 622 + 5398 5955 0 2 182,364, 0,193, +,+, 654853 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 5967 7098 (CAAGG)n 615 + 5967 7098 0 3 208,256,489, 0,386,642, +,+,+, 654855 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 7119 7847 (CAAGG)n 584 + 7119 7847 0 2 180,287, 0,441, +,+, 654858 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 8313 8634 (CCTCG)n 594 + 8313 8634 0 2 101,35, 0,286, +,+, 654861 Simple_repeat Simple_repeat 585 chrUn_NT_467487v1 9426 12948 GGXHOI 373 + 9426 12948 0 4 910,1249,1048,260, 0,930,2199,3262, +,+,+,+, 654865 Satellite W-chromosome 585 chrUn_NT_467488v1 10654 11581 GGXHOI 395 + 10654 11581 0 2 394,515, 0,412, +,+, 654875 Satellite W-chromosome 585 chrUn_NT_467489v1 643 1197 (CAAGG)n 442 + 643 1197 0 2 207,163, 0,391, +,+, 654880 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 1101 1809 (CGAGG)n 570 + 1101 1809 0 2 249,285, 0,423, +,+, 654882 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 1700 2059 (AGGTG)n 368 + 1700 2059 0 2 143,36, 0,323, +,+, 654884 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 2303 3171 (CGAGG)n 650 + 2303 3171 0 2 347,338, 0,530, +,+, 654888 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 3273 4678 (CGAGG)n 601 + 3273 4678 0 3 466,193,516, 0,642,889, +,+,+, 654891 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 4777 6157 (CGAGG)n 627 + 4777 6157 0 4 152,107,60,364, 0,649,937,1016, +,+,+,+, 654894 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 6185 7647 (CGAGG)n 588 + 6185 7647 0 5 183,184,143,202,418, 0,185,510,840,1044, +,+,+,+,+, 654898 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 7703 11318 (CGAGG)n 593 + 7703 11318 0 12 284,47,285,50,205,77,186,164,160,270,89,189, 0,849,915,1590,1640,2034,2147,2333,2672,2864,3315,3426, +,+,+,+,+,+,+,+,+,+,+,+, 654902 Simple_repeat Simple_repeat 585 chrUn_NT_467489v1 12346 13008 (CGAGG)n 617 + 12346 13008 0 3 216,287,147, 0,216,515, +,+,+, 654918 Simple_repeat Simple_repeat 585 chrUn_NT_467492v1 1980 3916 GGXHOI 463 - 1980 3916 0 3 531,188,1179, 0,558,757, -,-,-, 654927 Satellite W-chromosome 585 chrUn_NT_467492v1 4097 4912 GGXHOI 403 - 4097 4912 0 3 294,259,215, 0,319,600, -,-,-, 654928 Satellite W-chromosome 585 chrUn_NT_467492v1 6225 6856 GGXHOI 308 - 6225 6856 0 3 256,132,139, 0,298,492, -,-,-, 654930 Satellite W-chromosome 585 chrUn_NT_467492v1 6984 9065 GGXHOI 401 - 6984 9065 0 4 298,326,863,497, 0,361,704,1584, -,-,-,-, 654931 Satellite W-chromosome 585 chrUn_NT_467492v1 9129 13016 GGXHOI 429 - 9129 13016 0 4 109,519,1451,1754, 0,123,665,2133, -,-,-,-, 654932 Satellite W-chromosome 585 chrUn_NT_467494v1 4983 10161 GGXHOI 396 - 4983 10161 0 4 1838,271,2603,413, 0,1851,2142,4765, -,-,-,-, 654942 Satellite W-chromosome 585 chrUn_NT_467494v1 12168 12747 GGXHOI 397 - 12168 12747 0 2 145,414, 0,165, -,-, 654944 Satellite W-chromosome 585 chrUn_NT_467498v1 7464 7568 CR1-C4 547 - 7464 7568 0 2 53,51, 0,53, -,-, 655005 LINE CR1 585 chrUn_NT_467499v1 1798 2419 CR1-H 632 + 1798 2419 0 2 462,136, 0,485, +,+, 655010 LINE CR1 585 chrUn_NT_467500v1 5723 6956 GGXHOI 583 - 5723 6956 0 3 189,205,812, 0,205,421, -,-,-, 655029 Satellite W-chromosome 585 chrUn_NT_467500v1 6998 7913 GGXHOI 602 - 6998 7913 0 2 247,657, 0,258, -,-, 655031 Satellite W-chromosome 585 chrUn_NT_467500v1 7977 8749 GGXHOI 578 - 7977 8749 0 2 356,405, 0,367, -,-, 655033 Satellite W-chromosome 585 chrUn_NT_467500v1 8834 13001 GGXHOI 575 - 8834 13001 0 6 762,50,203,147,441,499, 0,1425,1502,1716,2554,3668, -,-,-,-,-,-, 655035 Satellite W-chromosome 585 chrUn_NT_467501v1 11052 12985 GGXHOI 407 - 11052 12985 0 4 673,298,219,667, 0,696,1010,1266, -,-,-,-, 655041 Satellite W-chromosome 585 chrUn_NT_467503v1 2017 2147 GA-rich 352 + 2017 2147 0 2 43,54, 0,76, +,+, 655098 Low_complexity Low_complexity 585 chrUn_NT_467503v1 8050 8182 GA-rich 320 + 8050 8182 0 2 43,33, 0,99, +,+, 655109 Low_complexity Low_complexity 585 chrUn_NT_467503v1 11024 11163 GA-rich 254 + 11024 11163 0 2 42,44, 0,95, +,+, 655113 Low_complexity Low_complexity 585 chrUn_NT_467504v1 8951 9808 GGXHOI 343 + 8951 9808 0 2 169,669, 0,188, +,+, 655130 Satellite W-chromosome 585 chrUn_NT_467504v1 10996 12963 GGXHOI 347 + 10996 12963 0 3 956,700,239, 0,971,1728, +,+,+, 655132 Satellite W-chromosome 585 chrUn_NT_467505v1 8237 9966 GGERVL-A-int 663 - 8237 9966 0 2 1291,438, 0,1291, -,-, 655143 LTR ERVL 585 chrUn_NT_467506v1 9874 10495 CR1-H 614 - 9874 10495 0 2 130,484, 0,137, -,-, 655154 LINE CR1 585 chrUn_NT_467508v1 2116 6352 GGXHOI 396 - 2116 6352 0 8 483,1613,494,627,288,173,193,175, 0,499,2126,2634,3280,3622,3817,4061, -,-,-,-,-,-,-,-, 655170 Satellite W-chromosome 585 chrUn_NT_467508v1 6444 12985 GGXHOI 349 - 6444 12985 0 12 206,980,1538,331,88,233,446,682,177,659,441,487, 0,221,1215,2803,3153,3258,3504,3978,4709,4922,5595,6054, -,-,-,-,-,-,-,-,-,-,-,-, 655171 Satellite W-chromosome 585 chrUn_NT_467510v1 968 1323 (CAGGC)n 303 + 968 1323 0 2 265,40, 0,315, +,+, 655182 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 1323 1592 (CAAGG)n 654 + 1323 1592 0 2 46,223, 0,46, +,+, 655183 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 1519 1860 (CAGGC)n 350 + 1519 1860 0 2 90,73, 0,268, +,+, 655184 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 1936 2299 (CAAGG)n 428 + 1936 2299 0 2 75,261, 0,102, +,+, 655186 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 2402 2761 (CAAGG)n 496 + 2402 2761 0 2 184,156, 0,203, +,+, 655188 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 2814 3045 (CAAGG)n 464 + 2814 3045 0 2 24,183, 0,48, +,+, 655190 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 3187 3792 (CCTTG)n 530 + 3187 3792 0 2 227,353, 0,252, +,+, 655192 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 4617 5725 (CAAGG)n 482 + 4617 5725 0 4 372,214,283,25, 0,372,614,1083, +,+,+,+, 655197 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 5779 6811 (CCTTG)n 503 + 5779 6811 0 3 200,545,223, 0,236,809, +,+,+, 655199 Simple_repeat Simple_repeat 585 chrUn_NT_467510v1 11810 12982 GGXHOI 346 - 11810 12982 0 2 940,201, 0,971, -,-, 655207 Satellite W-chromosome 585 chrUn_NT_467511v1 3365 4028 GGXHOI 260 - 3365 4028 0 2 133,501, 0,162, -,-, 655209 Satellite W-chromosome 585 chrUn_NT_467511v1 4106 6497 GGXHOI 386 - 4106 6497 0 4 772,229,1159,152, 0,788,1045,2239, -,-,-,-, 655210 Satellite W-chromosome 585 chrUn_NT_467511v1 6581 10214 GGXHOI 355 - 6581 10214 0 4 1191,1658,412,269, 0,1215,2908,3364, -,-,-,-, 655211 Satellite W-chromosome 585 chrUn_NT_467511v1 10496 12976 GGXHOI 399 - 10496 12976 0 2 680,1786, 0,694, -,-, 655212 Satellite W-chromosome 585 chrUn_NT_467514v1 7611 12988 GGXHOI 460 - 7611 12988 0 4 2082,1499,187,1559, 0,2099,3615,3818, -,-,-,-, 655224 Satellite W-chromosome 585 chrUn_NT_467516v1 6671 8306 GGXHOI 319 + 6671 8306 0 3 950,346,283, 0,963,1352, +,+,+, 655238 Satellite W-chromosome 585 chrUn_NT_467516v1 9740 10590 GGXHOI 397 + 9740 10590 0 3 498,135,145, 0,556,705, +,+,+, 655241 Satellite W-chromosome 585 chrUn_NT_467516v1 11412 12973 GGXHOI 383 + 11412 12973 0 2 992,522, 0,1039, +,+, 655244 Satellite W-chromosome 585 chrUn_NT_467517v1 142 592 CR1-F 494 + 142 592 0 2 198,207, 0,243, +,+, 655246 LINE CR1 585 chrUn_NT_467517v1 634 2717 CR1-F 530 + 634 2717 0 7 201,206,204,156,204,204,181, 0,243,491,964,1410,1656,1902, +,+,+,+,+,+,+, 655247 LINE CR1 585 chrUn_NT_467517v1 2761 5781 CR1-F 572 + 2761 5781 0 9 179,190,199,203,205,204,155,188,182, 0,224,456,955,1200,1447,1918,2363,2838, +,+,+,+,+,+,+,+,+, 655250 LINE CR1 585 chrUn_NT_467517v1 5825 6447 CR1-F 635 + 5825 6447 0 2 181,193, 0,429, +,+, 655255 LINE CR1 585 chrUn_NT_467517v1 6490 7566 CR1-F 460 + 6490 7566 0 4 185,174,180,176, 0,225,433,900, +,+,+,+, 655257 LINE CR1 585 chrUn_NT_467517v1 7610 11764 CR1-F 584 + 7610 11764 0 12 177,190,200,203,204,204,155,201,179,154,195,181, 0,221,453,953,1198,1444,1916,2362,2841,3064,3506,3973, +,+,+,+,+,+,+,+,+,+,+,+, 655259 LINE CR1 585 chrUn_NT_467517v1 11808 12650 CR1-F 570 + 11808 12650 0 4 156,187,193,187, 0,200,428,655, +,+,+,+, 655266 LINE CR1 585 chrUn_NT_467518v1 4593 11150 Z-REP 828 - 4593 11150 0 2 5606,940, 0,5617, -,-, 655272 Satellite macro 585 chrUn_NT_467519v1 664 1787 GGXHOI 355 - 664 1787 0 2 679,406, 0,717, -,-, 655277 Satellite W-chromosome 585 chrUn_NT_467519v1 8172 9791 GGXHOI 368 - 8172 9791 0 2 512,1044, 0,575, -,-, 655286 Satellite W-chromosome 585 chrUn_NT_467519v1 11121 12027 GGXHOI 310 - 11121 12027 0 2 469,383, 0,523, -,-, 655288 Satellite W-chromosome 585 chrUn_NT_467522v1 525 1553 CR1-F0 842 - 525 1553 0 2 422,606, 0,422, -,-, 655315 LINE CR1 585 chrUn_NT_467522v1 6018 8855 GGERVL-B-int 713 + 6018 8855 0 2 1926,911, 0,1926, +,+, 655331 LTR ERVL 585 chrUn_NT_467522v1 9677 10959 GGLTR7-int 253 + 9677 10959 0 2 313,273, 0,1009, +,+, 655334 LTR ERV1 585 chrUn_NT_467523v1 4506 4622 (CACTG)n 328 + 4506 4622 0 2 27,20, 0,96, +,+, 655344 Simple_repeat Simple_repeat 585 chrUn_NT_467523v1 6052 7692 CR1-F 448 - 6052 7692 0 3 127,603,220, 0,814,1420, -,-,-, 655346 LINE CR1 585 chrUn_NT_467523v1 6532 6872 GGLTR3C2 342 + 6532 6872 0 2 240,100, 0,240, +,+, 655348 LTR ERVL 585 chrUn_NT_467524v1 1836 7307 GGXHOI 581 - 1836 7307 0 8 225,182,570,127,525,22,574,701, 0,490,1433,2554,2719,3663,3701,4770, -,-,-,-,-,-,-,-, 655357 Satellite W-chromosome 585 chrUn_NT_467524v1 8145 12957 GGXHOI 567 - 8145 12957 0 7 811,402,287,144,797,14,994, 0,852,1920,2218,2678,3792,3818, -,-,-,-,-,-,-, 655366 Satellite W-chromosome 585 chrUn_NT_467525v1 4322 10759 GGXHOI 595 - 4322 10759 0 8 407,435,435,76,205,148,452,850, 0,1101,2222,3328,3420,3636,4463,5587, -,-,-,-,-,-,-,-, 655375 Satellite W-chromosome 585 chrUn_NT_467525v1 10844 12641 GGXHOI 577 - 10844 12641 0 3 463,147,441, 0,512,1356, -,-,-, 655382 Satellite W-chromosome 585 chrUn_NT_467526v1 5098 5961 GGERVK10-int 831 + 5098 5961 0 2 362,501, 0,362, +,+, 655387 LTR ERVK 585 chrUn_NT_467530v1 1098 1935 GGXHOI 329 - 1098 1935 0 2 466,354, 0,483, -,-, 655483 Satellite W-chromosome 585 chrUn_NT_467530v1 3638 6271 GGXHOI 351 - 3638 6271 0 3 265,1405,876, 0,290,1757, -,-,-, 655486 Satellite W-chromosome 585 chrUn_NT_467530v1 6388 7599 GGXHOI 336 - 6388 7599 0 2 392,757, 0,454, -,-, 655487 Satellite W-chromosome 585 chrUn_NT_467530v1 9253 10048 GGXHOI 358 - 9253 10048 0 2 505,231, 0,564, -,-, 655489 Satellite W-chromosome 585 chrUn_NT_467530v1 10547 11129 GGXHOI 276 - 10547 11129 0 2 423,141, 0,441, -,-, 655490 Satellite W-chromosome 585 chrUn_NT_467530v1 11442 12334 GGXHOI 333 - 11442 12334 0 2 303,529, 0,363, -,-, 655491 Satellite W-chromosome 585 chrUn_NT_467531v1 1129 2175 CR1-B2 566 - 1129 2175 0 2 816,224, 0,822, -,-, 655496 LINE CR1 585 chrUn_NT_467531v1 7016 7320 CR1-X 507 + 7016 7320 0 3 170,75,49, 0,170,255, +,+,+, 655499 LINE CR1 585 chrUn_NT_467532v1 929 1065 (CACTC)n 196 + 929 1065 0 2 21,62, 0,74, +,+, 655506 Simple_repeat Simple_repeat 585 chrUn_NT_467534v1 9428 9956 (CCTTG)n 500 + 9428 9956 0 2 134,216, 0,312, +,+, 655559 Simple_repeat Simple_repeat 585 chrUn_NT_467535v1 6391 7018 CR1-H 684 - 6391 7018 0 2 139,469, 0,158, -,-, 655571 LINE CR1 585 chrUn_NT_467535v1 9170 9625 CR1-H 673 - 9170 9625 0 2 159,296, 0,159, -,-, 655575 LINE CR1 585 chrUn_NT_467536v1 8040 12929 GGXHOI 564 - 8040 12929 0 4 199,181,119,18, 0,1085,4327,4871, -,-,-,-, 655588 Satellite W-chromosome 585 chrUn_NT_467540v1 8476 8752 (ACCCATAGGG)n 282 - 8476 8752 0 2 116,115, 0,161, -,-, 655628 Satellite Satellite 585 chrUn_NT_467540v1 9616 9892 (ACCCATAGGG)n 286 - 9616 9892 0 2 113,114, 0,162, -,-, 655632 Satellite Satellite 585 chrUn_NT_467541v1 3744 8251 GGXHOI 593 - 3744 8251 0 7 406,299,148,438,414,148,39, 0,1080,1390,2231,3227,3652,4468, -,-,-,-,-,-,-, 655645 Satellite W-chromosome 585 chrUn_NT_467541v1 8407 12914 GGXHOI 590 - 8407 12914 0 6 64,298,204,434,463,426, 0,676,985,1822,2926,4081, -,-,-,-,-,-, 655650 Satellite W-chromosome 585 chrUn_NT_467542v1 563 897 (CTCTATGGGG)n 616 - 563 897 0 2 123,46, 0,288, -,-, 655657 Satellite Satellite 585 chrUn_NT_467544v1 492 1544 GGLTR7A 808 + 492 1544 0 2 463,589, 0,463, +,+, 655671 LTR ERV1 585 chrUn_NT_467544v1 3891 6599 GGERVL-B-int 763 + 3891 6599 0 2 318,2390, 0,318, +,+, 655675 LTR ERVL 585 chrUn_NT_467544v1 7334 8730 GGLTR7-int 324 + 7334 8730 0 3 99,261,281, 0,101,1115, +,+,+, 655677 LTR ERV1 585 chrUn_NT_467546v1 9707 9905 A-rich 332 + 9707 9905 0 2 37,101, 0,97, +,+, 655714 Low_complexity Low_complexity 585 chrUn_NT_467547v1 937 5257 GGXHOI 426 - 937 5257 0 9 1298,335,157,229,194,441,931,355,235, 0,1316,1671,1846,2086,2313,2766,3712,4085, -,-,-,-,-,-,-,-,-, 655730 Satellite W-chromosome 585 chrUn_NT_467547v1 5344 5671 GGXHOI 500 - 5344 5671 0 2 145,146, 0,181, -,-, 655731 Satellite W-chromosome 585 chrUn_NT_467547v1 5833 6867 GGXHOI 374 - 5833 6867 0 4 133,512,134,179, 0,152,682,855, -,-,-,-, 655732 Satellite W-chromosome 585 chrUn_NT_467547v1 6951 9995 GGXHOI 446 - 6951 9995 0 5 258,1213,683,232,565, 0,306,1535,2236,2479, -,-,-,-,-, 655733 Satellite W-chromosome 585 chrUn_NT_467547v1 10109 10476 GGXHOI 423 - 10109 10476 0 2 204,147, 0,220, -,-, 655734 Satellite W-chromosome 585 chrUn_NT_467547v1 10810 11528 GGXHOI 378 - 10810 11528 0 2 359,329, 0,389, -,-, 655736 Satellite W-chromosome 585 chrUn_NT_467547v1 11610 12902 GGXHOI 403 - 11610 12902 0 3 468,656,123, 0,498,1169, -,-,-, 655737 Satellite W-chromosome 585 chrUn_NT_467548v1 4961 12899 GGXHOI 427 - 4961 12899 0 4 633,1820,314,5104, 0,655,2504,2834, -,-,-,-, 655739 Satellite W-chromosome 585 chrUn_NT_467549v1 5229 6141 GGXHOI 376 + 5229 6141 0 2 149,746, 0,166, +,+, 655746 Satellite W-chromosome 585 chrUn_NT_467549v1 8105 9462 GGXHOI 302 + 8105 9462 0 3 719,145,391, 0,764,966, +,+,+, 655749 Satellite W-chromosome 585 chrUn_NT_467549v1 9987 12896 GGXHOI 323 + 9987 12896 0 6 288,883,568,152,425,469, 0,336,1254,1834,2003,2440, +,+,+,+,+,+, 655751 Satellite W-chromosome 585 chrUn_NT_467551v1 4376 5906 GGXHOI 262 - 4376 5906 0 2 1369,117, 0,1413, -,-, 655760 Satellite W-chromosome 585 chrUn_NT_467551v1 6032 12894 GGXHOI 371 - 6032 12894 0 8 485,133,2240,885,541,1272,524,591, 0,538,693,2978,3878,4442,5734,6271, -,-,-,-,-,-,-,-, 655761 Satellite W-chromosome 585 chrUn_NT_467553v1 7606 11169 GGLTR7A 525 - 7606 11169 0 2 323,3158, 0,405, -,-, 655790 LTR ERV1 585 chrUn_NT_467553v1 11876 12889 (CAAGG)n 470 + 11876 12889 0 4 222,12,42,355, 0,415,616,658, +,+,+,+, 655795 Simple_repeat Simple_repeat 585 chrUn_NT_467554v1 4646 5259 CR1-X 423 + 4646 5259 0 4 51,167,132,263, 0,51,218,350, +,+,+,+, 655801 LINE CR1 585 chrUn_NT_467555v1 7703 8821 CR1-B2 668 - 7703 8821 0 2 901,217, 0,901, -,-, 655818 LINE CR1 585 chrUn_NT_467556v1 1905 2155 CR1-X 362 - 1905 2155 0 2 81,169, 0,81, -,-, 655824 LINE CR1 585 chrUn_NT_467557v1 268 434 GA-rich 479 + 268 434 0 2 55,57, 0,109, +,+, 655837 Low_complexity Low_complexity 585 chrUn_NT_467557v1 2095 2214 GA-rich 374 + 2095 2214 0 2 22,54, 0,65, +,+, 655847 Low_complexity Low_complexity 585 chrUn_NT_467559v1 428 3114 GGXHOI 405 - 428 3114 0 3 132,505,1984, 0,157,702, -,-,-, 655869 Satellite W-chromosome 585 chrUn_NT_467559v1 3270 4967 GGXHOI 409 - 3270 4967 0 5 162,561,347,356,146, 0,199,800,1174,1551, -,-,-,-,-, 655870 Satellite W-chromosome 585 chrUn_NT_467559v1 5169 6136 GGXHOI 392 - 5169 6136 0 2 319,611, 0,356, -,-, 655871 Satellite W-chromosome 585 chrUn_NT_467559v1 6214 7742 GGXHOI 406 - 6214 7742 0 2 384,1107, 0,421, -,-, 655872 Satellite W-chromosome 585 chrUn_NT_467559v1 8258 9322 GGXHOI 392 - 8258 9322 0 2 717,321, 0,743, -,-, 655874 Satellite W-chromosome 585 chrUn_NT_467559v1 9398 10528 GGXHOI 371 - 9398 10528 0 2 165,947, 0,183, -,-, 655875 Satellite W-chromosome 585 chrUn_NT_467559v1 10681 11867 GGXHOI 385 - 10681 11867 0 3 794,164,164, 0,832,1022, -,-,-, 655876 Satellite W-chromosome 585 chrUn_NT_467560v1 1392 3290 GGXHOI 456 - 1392 3290 0 4 511,364,564,411, 0,530,906,1487, -,-,-,-, 655880 Satellite W-chromosome 585 chrUn_NT_467560v1 3390 11087 GGXHOI 404 - 3390 11087 0 13 177,399,139,1362,242,292,136,1507,678,520,306,962,709, 0,210,622,800,2178,2438,2771,2921,4446,5142,5688,6010,6988, -,-,-,-,-,-,-,-,-,-,-,-,-, 655881 Satellite W-chromosome 585 chrUn_NT_467560v1 11173 11593 GGXHOI 505 - 11173 11593 0 3 62,157,145, 0,95,275, -,-,-, 655882 Satellite W-chromosome 585 chrUn_NT_467560v1 11695 12759 GGXHOI 320 - 11695 12759 0 3 291,445,277, 0,311,787, -,-,-, 655883 Satellite W-chromosome 585 chrUn_NT_467561v1 3162 3724 CR1-X 404 + 3162 3724 0 3 171,132,259, 0,171,303, +,+,+, 655885 LINE CR1 585 chrUn_NT_467562v1 921 12246 CR1-F 512 - 921 12246 0 31 210,202,159,204,203,204,191,189,199,149,203,203,203,164,201,155,204,204,203,200,198,154,205,206,204,200,196,156,204,200,201, 0,254,745,1171,1417,1662,2167,2400,2634,3118,3522,3767,4012,4515,4955,5446,5868,6114,6360,6863,7341,7829,8250,8497,8745,9251,9724,10211,10636,10882,11124, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 655891 LINE CR1 585 chrUn_NT_467562v1 12543 12782 CR1-F 781 - 12543 12782 0 2 83,63, 0,176, -,-, 655910 LINE CR1 585 chrUn_NT_467563v1 11233 12148 GGXHOI 417 - 11233 12148 0 2 240,663, 0,252, -,-, 655913 Satellite W-chromosome 585 chrUn_NT_467564v1 5291 5708 CR1-Y4 586 + 5291 5708 0 2 137,270, 0,147, +,+, 655919 LINE CR1 585 chrUn_NT_467566v1 2248 3634 GGLTR7-int 261 - 2248 3634 0 3 275,315,104, 0,965,1282, -,-,-, 655935 LTR ERV1 585 chrUn_NT_467566v1 4363 7222 GGERVL-B-int 701 - 4363 7222 0 2 921,1938, 0,921, -,-, 655937 LTR ERVL 585 chrUn_NT_467566v1 10579 11234 (CAGGC)n 493 + 10579 11234 0 2 228,408, 0,247, +,+, 655947 Simple_repeat Simple_repeat 585 chrUn_NT_467566v1 12005 12595 (CAAGG)n 600 + 12005 12595 0 2 199,105, 0,485, +,+, 655954 Simple_repeat Simple_repeat 585 chrUn_NT_467567v1 2564 5826 GGXHOI 389 - 2564 5826 0 7 360,916,108,358,504,480,322, 0,375,1334,1458,1872,2432,2940, -,-,-,-,-,-,-, 655961 Satellite W-chromosome 585 chrUn_NT_467567v1 7479 8292 GGXHOI 394 - 7479 8292 0 2 357,399, 0,414, -,-, 655964 Satellite W-chromosome 585 chrUn_NT_467567v1 8485 10321 GGXHOI 385 - 8485 10321 0 3 293,108,1377, 0,336,459, -,-,-, 655965 Satellite W-chromosome 585 chrUn_NT_467567v1 10448 12842 GGXHOI 381 - 10448 12842 0 6 391,382,415,352,397,297, 0,411,844,1313,1685,2097, -,-,-,-,-,-, 655966 Satellite W-chromosome 585 chrUn_NT_467569v1 2390 5491 GGXHOI 369 - 2390 5491 0 5 155,1686,214,261,725, 0,168,1870,2101,2376, -,-,-,-,-, 655989 Satellite W-chromosome 585 chrUn_NT_467569v1 5588 12850 GGXHOI 352 - 5588 12850 0 5 451,2639,2217,556,1324, 0,470,3132,5365,5938, -,-,-,-,-, 655990 Satellite W-chromosome 585 chrUn_NT_467571v1 4137 4804 GGXHOI 397 + 4137 4804 0 3 108,374,144, 0,132,523, +,+,+, 656042 Satellite W-chromosome 585 chrUn_NT_467571v1 5219 6432 GGXHOI 381 + 5219 6432 0 2 140,1060, 0,153, +,+, 656044 Satellite W-chromosome 585 chrUn_NT_467571v1 7109 9601 GGXHOI 389 + 7109 9601 0 3 401,1032,1025, 0,421,1467, +,+,+, 656046 Satellite W-chromosome 585 chrUn_NT_467571v1 9682 11614 GGXHOI 394 + 9682 11614 0 3 757,314,783, 0,819,1149, +,+,+, 656047 Satellite W-chromosome 585 chrUn_NT_467571v1 11775 12456 GGXHOI 446 + 11775 12456 0 2 102,556, 0,125, +,+, 656048 Satellite W-chromosome 585 chrUn_NT_467574v1 3606 6136 GGXHOI 379 - 3606 6136 0 3 1401,514,578, 0,1425,1952, -,-,-, 656059 Satellite W-chromosome 585 chrUn_NT_467574v1 6261 7504 GGXHOI 335 - 6261 7504 0 2 795,432, 0,811, -,-, 656060 Satellite W-chromosome 585 chrUn_NT_467574v1 7596 12818 GGXHOI 374 - 7596 12818 0 3 2636,527,1986, 0,2648,3236, -,-,-, 656061 Satellite W-chromosome 585 chrUn_NT_467575v1 743 1723 GGXHOI 406 + 743 1723 0 2 191,762, 0,218, +,+, 656064 Satellite W-chromosome 585 chrUn_NT_467575v1 1972 4985 GGXHOI 416 + 1972 4985 0 5 187,829,1118,435,383, 0,200,1044,2182,2630, +,+,+,+,+, 656065 Satellite W-chromosome 585 chrUn_NT_467575v1 5198 12245 GGXHOI 401 + 5198 12245 0 8 292,1687,1380,1024,289,64,898,1193, 0,349,2048,3448,4513,4859,4943,5854, +,+,+,+,+,+,+,+, 656066 Satellite W-chromosome 585 chrUn_NT_467576v1 11183 12460 GGLTR7-int 274 - 11183 12460 0 2 279,300, 0,977, -,-, 656079 LTR ERV1 585 chrUn_NT_467577v1 2529 3450 GGXHOI 389 + 2529 3450 0 3 428,149,312, 0,445,609, +,+,+, 656082 Satellite W-chromosome 585 chrUn_NT_467577v1 3915 5987 GGXHOI 378 + 3915 5987 0 2 1494,561, 0,1511, +,+, 656084 Satellite W-chromosome 585 chrUn_NT_467577v1 8225 8868 GGXHOI 303 + 8225 8868 0 2 173,414, 0,229, +,+, 656089 Satellite W-chromosome 585 chrUn_NT_467577v1 9379 10528 GGXHOI 343 + 9379 10528 0 2 378,754, 0,395, +,+, 656091 Satellite W-chromosome 585 chrUn_NT_467577v1 11750 12557 GGXHOI 347 + 11750 12557 0 2 219,536, 0,271, +,+, 656094 Satellite W-chromosome 585 chrUn_NT_467578v1 1246 1901 (CAAGG)n 516 + 1246 1901 0 2 223,110, 0,545, +,+, 656101 Simple_repeat Simple_repeat 585 chrUn_NT_467578v1 1988 2390 (CCTTG)n 479 + 1988 2390 0 2 203,194, 0,208, +,+, 656103 Simple_repeat Simple_repeat 585 chrUn_NT_467578v1 2995 3650 (CAAGG)n 519 + 2995 3650 0 2 379,250, 0,405, +,+, 656107 Simple_repeat Simple_repeat 585 chrUn_NT_467578v1 3698 4259 (CCTTG)n 521 + 3698 4259 0 2 59,453, 0,108, +,+, 656108 Simple_repeat Simple_repeat 585 chrUn_NT_467578v1 5087 5974 GGXHOI 401 + 5087 5974 0 2 394,475, 0,412, +,+, 656112 Satellite W-chromosome 585 chrUn_NT_467578v1 6607 7601 GGXHOI 366 + 6607 7601 0 2 687,267, 0,727, +,+, 656114 Satellite W-chromosome 585 chrUn_NT_467578v1 8974 9875 GGXHOI 367 + 8974 9875 0 2 339,548, 0,353, +,+, 656116 Satellite W-chromosome 585 chrUn_NT_467580v1 584 2672 GGXHOI 572 - 584 2672 0 3 140,22,955, 0,377,1133, -,-,-, 656136 Satellite W-chromosome 585 chrUn_NT_467580v1 2715 3774 GGXHOI 570 - 2715 3774 0 2 783,237, 0,822, -,-, 656140 Satellite W-chromosome 585 chrUn_NT_467580v1 3786 7254 GGXHOI 564 - 3786 7254 0 4 982,207,22,208, 0,1341,1785,3260, -,-,-,-, 656142 Satellite W-chromosome 585 chrUn_NT_467580v1 10598 12842 GGXHOI 538 - 10598 12842 0 4 156,218,495,188, 0,738,1169,2056, -,-,-,-, 656149 Satellite W-chromosome 585 chrUn_NT_467581v1 5403 10103 GGXHOI 384 - 5403 10103 0 5 1872,344,1699,225,424, 0,1914,2309,4021,4276, -,-,-,-,-, 656154 Satellite W-chromosome 585 chrUn_NT_467581v1 10277 12838 GGXHOI 427 - 10277 12838 0 4 283,1135,227,822, 0,303,1459,1739, -,-,-,-, 656155 Satellite W-chromosome 585 chrUn_NT_467582v1 2782 3275 GGLTR3F1 911 + 2782 3275 0 2 231,209, 0,284, +,+, 656157 LTR ERVL 585 chrUn_NT_467582v1 12220 12698 GGLTR3F2 436 - 12220 12698 0 2 236,212, 0,266, -,-, 656163 LTR ERVL 585 chrUn_NT_467583v1 7613 7889 CR1-X2 377 + 7613 7889 0 2 62,214, 0,62, +,+, 656167 LINE CR1 585 chrUn_NT_467584v1 2987 4899 GGXHOI 338 + 2987 4899 0 3 138,163,1513, 0,192,399, +,+,+, 656172 Satellite W-chromosome 585 chrUn_NT_467584v1 5216 8594 GGXHOI 377 + 5216 8594 0 2 2678,683, 0,2695, +,+, 656173 Satellite W-chromosome 585 chrUn_NT_467585v1 110 580 (CGAGG)n 525 + 110 580 0 2 265,177, 0,293, +,+, 656177 Simple_repeat Simple_repeat 585 chrUn_NT_467585v1 770 1654 (CGAGG)n 516 + 770 1654 0 2 479,231, 0,653, +,+, 656179 Simple_repeat Simple_repeat 585 chrUn_NT_467585v1 3936 4338 (CGAGG)n 475 + 3936 4338 0 2 193,184, 0,218, +,+, 656186 Simple_repeat Simple_repeat 585 chrUn_NT_467585v1 4528 4950 (CGAGG)n 496 + 4528 4950 0 2 180,189, 0,233, +,+, 656188 Simple_repeat Simple_repeat 585 chrUn_NT_467585v1 5902 6379 (CGAGG)n 472 + 5902 6379 0 2 274,184, 0,293, +,+, 656192 Simple_repeat Simple_repeat 585 chrUn_NT_467585v1 6757 7657 (CGAGG)n 489 + 6757 7657 0 3 186,473,184, 0,227,716, +,+,+, 656194 Simple_repeat Simple_repeat 585 chrUn_NT_467585v1 10326 10699 (CGAGG)n 547 + 10326 10699 0 2 171,179, 0,194, +,+, 656205 Simple_repeat Simple_repeat 585 chrUn_NT_467587v1 1451 1605 (CGCCT)n 242 + 1451 1605 0 2 45,51, 0,103, +,+, 656230 Simple_repeat Simple_repeat 585 chrUn_NT_467587v1 1605 2593 (CCTCG)n 476 + 1605 2593 0 2 655,299, 0,689, +,+, 656232 Simple_repeat Simple_repeat 585 chrUn_NT_467587v1 3047 3606 (CCTCG)n 528 + 3047 3606 0 2 216,329, 0,230, +,+, 656236 Simple_repeat Simple_repeat 585 chrUn_NT_467587v1 3962 6383 GGERV10_LTR 874 + 3962 6383 0 2 41,38, 0,2383, +,+, 656242 LTR ERVL 585 chrUn_NT_467587v1 4004 6217 GGLTR10D-int 918 + 4004 6217 0 2 1847,363, 0,1850, +,+, 656243 LTR ERVK 585 chrUn_NT_467587v1 6395 8847 GGLTR7-int 589 - 6395 8847 0 2 793,338, 0,2114, -,-, 656244 LTR ERV1 585 chrUn_NT_467588v1 1518 2631 CR1-B2 681 - 1518 2631 0 2 885,225, 0,888, -,-, 656254 LINE CR1 585 chrUn_NT_467589v1 5981 9126 GGLTR7-int 607 - 5981 9126 0 4 593,94,229,1329, 0,594,688,1816, -,-,-,-, 656272 LTR ERV1 585 chrUn_NT_467590v1 11411 11912 GGLTR3F2 626 + 11411 11912 0 2 230,218, 0,283, +,+, 656289 LTR ERVL 585 chrUn_NT_467591v1 171 2264 GGXHOI 548 - 171 2264 0 6 17,502,195,192,41,120, 0,339,884,1403,1898,1973, -,-,-,-,-,-, 656293 Satellite W-chromosome 585 chrUn_NT_467591v1 2348 4518 GGXHOI 464 - 2348 4518 0 3 1054,520,268, 0,1115,1902, -,-,-, 656297 Satellite W-chromosome 585 chrUn_NT_467591v1 4585 5230 GGXHOI 529 - 4585 5230 0 2 479,150, 0,495, -,-, 656299 Satellite W-chromosome 585 chrUn_NT_467591v1 7779 8760 GGXHOI 362 - 7779 8760 0 2 17,763, 0,218, -,-, 656303 Satellite W-chromosome 585 chrUn_NT_467591v1 8867 10851 GGXHOI 530 - 8867 10851 0 5 384,198,165,157,317, 0,797,1319,1497,1667, -,-,-,-,-, 656305 Satellite W-chromosome 585 chrUn_NT_467591v1 11423 11956 GGXHOI 512 - 11423 11956 0 2 29,150, 0,383, -,-, 656309 Satellite W-chromosome 585 chrUn_NT_467591v1 12097 12783 GGXHOI 460 - 12097 12783 0 2 325,171, 0,515, -,-, 656311 Satellite W-chromosome 585 chrUn_NT_467592v1 7127 10694 GGXHOI 466 - 7127 10694 0 5 234,1301,149,513,1303, 0,252,1574,1737,2264, -,-,-,-,-, 656314 Satellite W-chromosome 585 chrUn_NT_467592v1 10760 12788 GGXHOI 387 - 10760 12788 0 3 1393,394,173, 0,1445,1855, -,-,-, 656315 Satellite W-chromosome 585 chrUn_NT_467593v1 4173 7736 GGXHOI 406 - 4173 7736 0 5 608,1953,447,146,338, 0,623,2608,3068,3225, -,-,-,-,-, 656317 Satellite W-chromosome 585 chrUn_NT_467593v1 7821 10350 GGXHOI 412 - 7821 10350 0 4 1411,577,146,336, 0,1446,2036,2193, -,-,-,-, 656318 Satellite W-chromosome 585 chrUn_NT_467593v1 10853 12784 GGXHOI 419 - 10853 12784 0 4 1175,488,147,75, 0,1197,1698,1856, -,-,-,-, 656320 Satellite W-chromosome 585 chrUn_NT_467594v1 1714 1812 (AAT)n 626 + 1714 1812 0 2 53,10, 0,88, +,+, 656322 Simple_repeat Simple_repeat 585 chrUn_NT_467595v1 879 3550 GGXHOI 333 - 879 3550 0 3 1523,365,745, 0,1540,1926, -,-,-, 656332 Satellite W-chromosome 585 chrUn_NT_467595v1 3780 4694 GGXHOI 350 - 3780 4694 0 2 433,459, 0,455, -,-, 656333 Satellite W-chromosome 585 chrUn_NT_467595v1 5256 10636 GGXHOI 371 - 5256 10636 0 8 143,756,1695,572,149,275,874,740, 0,166,938,2692,3278,3452,3750,4640, -,-,-,-,-,-,-,-, 656335 Satellite W-chromosome 585 chrUn_NT_467595v1 11111 12773 GGXHOI 390 - 11111 12773 0 2 903,744, 0,918, -,-, 656337 Satellite W-chromosome 585 chrUn_NT_467596v1 6138 6891 GGXHOI 520 + 6138 6891 0 2 72,154, 0,599, +,+, 656344 Satellite W-chromosome 585 chrUn_NT_467596v1 6947 8944 GGXHOI 576 + 6947 8944 0 3 177,148,1113, 0,725,884, +,+,+, 656347 Satellite W-chromosome 585 chrUn_NT_467596v1 8955 12769 GGXHOI 572 + 8955 12769 0 5 247,249,407,156,209, 0,1174,2096,3432,3605, +,+,+,+,+, 656350 Satellite W-chromosome 585 chrUn_NT_467597v1 1191 1668 GGXHOI 408 - 1191 1668 0 2 112,306, 0,171, -,-, 656356 Satellite W-chromosome 585 chrUn_NT_467597v1 2069 3433 GGXHOI 405 - 2069 3433 0 2 879,467, 0,897, -,-, 656358 Satellite W-chromosome 585 chrUn_NT_467597v1 3529 4074 GGXHOI 293 - 3529 4074 0 2 276,235, 0,310, -,-, 656359 Satellite W-chromosome 585 chrUn_NT_467597v1 4397 5579 GGXHOI 396 - 4397 5579 0 2 213,951, 0,231, -,-, 656360 Satellite W-chromosome 585 chrUn_NT_467597v1 8304 11537 GGXHOI 373 - 8304 11537 0 4 232,388,2162,360, 0,282,693,2873, -,-,-,-, 656363 Satellite W-chromosome 585 chrUn_NT_467598v1 1565 6785 GGXHOI 362 - 1565 6785 0 4 3366,221,1301,181, 0,3429,3712,5039, -,-,-,-, 656366 Satellite W-chromosome 585 chrUn_NT_467598v1 6876 11205 GGXHOI 365 - 6876 11205 0 4 1012,1987,871,383, 0,1028,3060,3946, -,-,-,-, 656367 Satellite W-chromosome 585 chrUn_NT_467598v1 12153 12768 GGXHOI 312 - 12153 12768 0 2 442,142, 0,473, -,-, 656369 Satellite W-chromosome 585 chrUn_NT_467599v1 1965 2224 (ACCCATAGGG)n 339 + 1965 2224 0 2 113,114, 0,145, +,+, 656374 Satellite Satellite 585 chrUn_NT_467599v1 4224 4731 (CAGTA)n 343 + 4224 4731 0 2 293,202, 0,305, +,+, 656377 Simple_repeat Simple_repeat 585 chrUn_NT_467599v1 4866 5333 (CAGTA)n 271 + 4866 5333 0 2 208,217, 0,250, +,+, 656378 Simple_repeat Simple_repeat 585 chrUn_NT_467600v1 6001 6250 CR1-X 508 + 6001 6250 0 2 171,78, 0,171, +,+, 656404 LINE CR1 585 chrUn_NT_467600v1 11952 12772 CR1-B2 636 + 11952 12772 0 2 225,592, 0,228, +,+, 656408 LINE CR1 585 chrUn_NT_467601v1 2819 4091 CR1-H 596 - 2819 4091 0 2 117,1155, 0,117, -,-, 656411 LINE CR1 585 chrUn_NT_467602v1 765 1244 GGXHOI 333 - 765 1244 0 2 134,329, 0,150, -,-, 656418 Satellite W-chromosome 585 chrUn_NT_467602v1 2254 2660 GGXHOI 413 - 2254 2660 0 2 138,225, 0,181, -,-, 656420 Satellite W-chromosome 585 chrUn_NT_467602v1 3391 4942 GGXHOI 329 - 3391 4942 0 4 909,239,142,172, 0,923,1190,1379, -,-,-,-, 656422 Satellite W-chromosome 585 chrUn_NT_467602v1 5053 5450 GGXHOI 352 - 5053 5450 0 2 116,246, 0,151, -,-, 656423 Satellite W-chromosome 585 chrUn_NT_467602v1 5553 7792 GGXHOI 315 - 5553 7792 0 10 122,241,130,488,131,380,130,132,93,128, 0,134,389,531,1048,1211,1631,1823,2004,2111, -,-,-,-,-,-,-,-,-,-, 656424 Satellite W-chromosome 585 chrUn_NT_467602v1 7895 8259 GGXHOI 290 - 7895 8259 0 2 210,116, 0,248, -,-, 656425 Satellite W-chromosome 585 chrUn_NT_467602v1 8428 8989 GGXHOI 337 - 8428 8989 0 3 156,131,210, 0,174,351, -,-,-, 656426 Satellite W-chromosome 585 chrUn_NT_467602v1 9060 9647 GGXHOI 390 - 9060 9647 0 2 97,458, 0,129, -,-, 656427 Satellite W-chromosome 585 chrUn_NT_467602v1 9863 11292 GGXHOI 374 - 9863 11292 0 4 388,187,146,618, 0,420,650,811, -,-,-,-, 656428 Satellite W-chromosome 585 chrUn_NT_467602v1 11378 12750 GGXHOI 345 - 11378 12750 0 5 135,136,527,122,363, 0,159,308,870,1009, -,-,-,-,-, 656429 Satellite W-chromosome 585 chrUn_NT_467603v1 1559 2020 GGXHOI 429 - 1559 2020 0 2 168,280, 0,181, -,-, 656431 Satellite W-chromosome 585 chrUn_NT_467603v1 2682 3669 GGXHOI 406 - 2682 3669 0 4 178,149,142,436, 0,190,370,551, -,-,-,-, 656434 Satellite W-chromosome 585 chrUn_NT_467603v1 3753 6189 GGXHOI 371 - 3753 6189 0 8 477,179,382,226,220,453,132,159, 0,500,693,1086,1353,1589,2100,2277, -,-,-,-,-,-,-,-, 656435 Satellite W-chromosome 585 chrUn_NT_467603v1 6287 7886 GGXHOI 397 - 6287 7886 0 3 154,1136,260, 0,191,1339, -,-,-, 656436 Satellite W-chromosome 585 chrUn_NT_467603v1 8182 12650 GGXHOI 478 - 8182 12650 0 7 147,592,208,2317,685,160,192, 0,195,803,1054,3386,4087,4276, -,-,-,-,-,-,-, 656438 Satellite W-chromosome 585 chrUn_NT_467604v1 7689 8125 CR1-H 607 + 7689 8125 0 2 276,160, 0,276, +,+, 656447 LINE CR1 585 chrUn_NT_467604v1 10387 11010 CR1-H 680 + 10387 11010 0 2 484,139, 0,484, +,+, 656451 LINE CR1 585 chrUn_NT_467605v1 6977 8324 GGXHOI 437 - 6977 8324 0 3 654,162,477, 0,696,870, -,-,-, 656464 Satellite W-chromosome 585 chrUn_NT_467605v1 8999 12750 GGXHOI 356 - 8999 12750 0 5 191,1343,481,1368,281, 0,215,1572,2081,3470, -,-,-,-,-, 656467 Satellite W-chromosome 585 chrUn_NT_467606v1 139 2170 CR1-F 536 + 139 2170 0 8 196,201,195,174,153,195,202,180, 0,237,480,716,934,1372,1607,1851, +,+,+,+,+,+,+,+, 656470 LINE CR1 585 chrUn_NT_467606v1 2436 5207 CR1-F 522 + 2436 5207 0 9 189,198,203,201,204,154,201,204,165, 0,231,726,970,1212,1681,2119,2360,2606, +,+,+,+,+,+,+,+,+, 656473 LINE CR1 585 chrUn_NT_467606v1 5251 10107 CR1-F 563 + 5251 10107 0 16 177,188,200,203,203,204,154,155,182,175,189,189,203,201,204,180, 0,221,447,946,1191,1436,1907,2349,2567,3012,3232,3463,3943,4187,4430,4676, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 656477 LINE CR1 585 chrUn_NT_467606v1 10372 12711 CR1-F 530 + 10372 12711 0 7 190,199,202,204,204,155,205, 0,232,729,973,1219,1689,2134, +,+,+,+,+,+,+, 656484 LINE CR1 585 chrUn_NT_467608v1 1213 2800 GGXHOI 431 + 1213 2800 0 2 486,1084, 0,503, +,+, 656495 Satellite W-chromosome 585 chrUn_NT_467608v1 2892 3454 GGXHOI 448 + 2892 3454 0 2 406,136, 0,426, +,+, 656496 Satellite W-chromosome 585 chrUn_NT_467608v1 3533 6398 GGXHOI 487 + 3533 6398 0 5 1219,474,730,151,144, 0,1234,1726,2513,2721, +,+,+,+,+, 656497 Satellite W-chromosome 585 chrUn_NT_467608v1 6464 10463 GGXHOI 479 + 6464 10463 0 7 1094,155,525,272,940,145,771, 0,1108,1280,1823,2112,3071,3228, +,+,+,+,+,+,+, 656498 Satellite W-chromosome 585 chrUn_NT_467608v1 10562 12437 GGXHOI 427 + 10562 12437 0 3 1096,479,266, 0,1112,1609, +,+,+, 656499 Satellite W-chromosome 585 chrUn_NT_467609v1 10012 11133 CR1-B2 709 - 10012 11133 0 2 893,225, 0,896, -,-, 656507 LINE CR1 585 chrUn_NT_467610v1 2920 4549 GGXHOI 373 - 2920 4549 0 2 613,974, 0,655, -,-, 656510 Satellite W-chromosome 585 chrUn_NT_467610v1 4755 6954 GGXHOI 388 - 4755 6954 0 2 393,1749, 0,450, -,-, 656511 Satellite W-chromosome 585 chrUn_NT_467610v1 8355 9551 GGXHOI 360 - 8355 9551 0 2 392,748, 0,448, -,-, 656513 Satellite W-chromosome 585 chrUn_NT_467610v1 9964 12072 GGXHOI 331 - 9964 12072 0 2 276,1805, 0,303, -,-, 656514 Satellite W-chromosome 585 chrUn_NT_467611v1 1733 3056 GGXHOI 352 - 1733 3056 0 2 444,864, 0,459, -,-, 656518 Satellite W-chromosome 585 chrUn_NT_467611v1 3898 5670 GGXHOI 376 - 3898 5670 0 4 360,110,816,381, 0,394,520,1391, -,-,-,-, 656521 Satellite W-chromosome 585 chrUn_NT_467611v1 6099 7519 GGXHOI 363 - 6099 7519 0 2 493,864, 0,556, -,-, 656522 Satellite W-chromosome 585 chrUn_NT_467612v1 6619 7133 (CAAGG)n 572 + 6619 7133 0 2 167,154, 0,360, +,+, 656535 Simple_repeat Simple_repeat 585 chrUn_NT_467612v1 7578 8332 (CAAGG)n 575 + 7578 8332 0 3 179,25,175, 0,492,579, +,+,+, 656540 Simple_repeat Simple_repeat 585 chrUn_NT_467612v1 8390 9641 (CAAGG)n 592 + 8390 9641 0 6 91,50,312,182,98,90, 0,292,361,706,888,1161, +,+,+,+,+,+, 656545 Simple_repeat Simple_repeat 585 chrUn_NT_467612v1 9964 10523 (CAAGG)n 601 + 9964 10523 0 3 177,190,192, 0,177,367, +,+,+, 656551 Simple_repeat Simple_repeat 585 chrUn_NT_467612v1 11767 12175 GGXHOI 373 + 11767 12175 0 2 146,240, 0,168, +,+, 656556 Satellite W-chromosome 585 chrUn_NT_467614v1 1202 12746 GGXHOI 386 + 1202 12746 0 14 430,914,271,431,1730,972,1599,954,550,356,883,1294,721,138, 0,447,1417,1706,2154,3900,4889,6502,7472,8038,8413,9313,10628,11406, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 656606 Satellite W-chromosome 585 chrUn_NT_467616v1 1873 3749 GGXHOI 385 - 1873 3749 0 2 499,1328, 0,548, -,-, 656619 Satellite W-chromosome 585 chrUn_NT_467616v1 5031 5769 (CGAGG)n 617 + 5031 5769 0 3 217,150,102, 0,217,636, +,+,+, 656624 Simple_repeat Simple_repeat 585 chrUn_NT_467616v1 6506 7193 (CGAGG)n 638 + 6506 7193 0 2 309,198, 0,489, +,+, 656632 Simple_repeat Simple_repeat 585 chrUn_NT_467616v1 7505 8432 (CGAGG)n 622 + 7505 8432 0 3 400,313,192, 0,422,735, +,+,+, 656637 Simple_repeat Simple_repeat 585 chrUn_NT_467616v1 8445 9490 (CGAGG)n 621 + 8445 9490 0 3 198,442,225, 0,378,820, +,+,+, 656639 Simple_repeat Simple_repeat 585 chrUn_NT_467616v1 9431 9732 (CAAGG)n 528 + 9431 9732 0 2 100,20, 0,281, +,+, 656641 Simple_repeat Simple_repeat 585 chrUn_NT_467616v1 10840 12608 (CGAGG)n 582 + 10840 12608 0 6 184,343,179,263,35,227, 0,507,864,1054,1506,1541, +,+,+,+,+,+, 656647 Simple_repeat Simple_repeat 585 chrUn_NT_467616v1 12609 12752 (GGCGA)n 324 + 12609 12752 0 2 10,90, 0,53, +,+, 656651 Simple_repeat Simple_repeat 585 chrUn_NT_467617v1 6875 7187 CR1-X 469 + 6875 7187 0 3 171,81,57, 0,171,255, +,+,+, 656664 LINE CR1 585 chrUn_NT_467617v1 12499 12750 CR1-B2 739 + 12499 12750 0 2 192,56, 0,195, +,+, 656667 LINE CR1 585 chrUn_NT_467618v1 526 3321 GGXHOI 460 + 526 3321 0 4 975,738,153,861, 0,1013,1766,1934, +,+,+,+, 656669 Satellite W-chromosome 585 chrUn_NT_467618v1 3449 3939 GGXHOI 444 + 3449 3939 0 2 160,309, 0,181, +,+, 656670 Satellite W-chromosome 585 chrUn_NT_467618v1 4097 8746 GGXHOI 444 + 4097 8746 0 9 439,310,150,439,525,898,165,1089,445, 0,495,816,981,1435,1975,2915,3095,4204, +,+,+,+,+,+,+,+,+, 656671 Satellite W-chromosome 585 chrUn_NT_467618v1 8864 9311 GGXHOI 405 + 8864 9311 0 2 242,170, 0,277, +,+, 656672 Satellite W-chromosome 585 chrUn_NT_467618v1 9419 12345 GGXHOI 438 + 9419 12345 0 6 1365,161,145,311,536,264, 0,1407,1583,1741,2092,2662, +,+,+,+,+,+, 656673 Satellite W-chromosome 585 chrUn_NT_467620v1 7847 8407 CR1-X 447 + 7847 8407 0 3 165,132,221, 0,165,339, +,+,+, 656685 LINE CR1 585 chrUn_NT_467622v1 3650 6367 GGERVL-B-int 729 - 3650 6367 0 4 917,1061,64,314, 0,917,1978,2403, -,-,-,-, 656693 LTR ERVL 585 chrUn_NT_467622v1 8867 12133 GGLTR7A 826 - 8867 12133 0 2 590,2667, 0,599, -,-, 656697 LTR ERV1 585 chrUn_NT_467622v1 12131 12740 GGLTR7A 747 + 12131 12740 0 2 88,512, 0,97, +,+, 656698 LTR ERV1 585 chrUn_NT_467623v1 1082 5538 GGXHOI 426 + 1082 5538 0 5 1483,64,1506,1020,266, 0,1540,1624,3150,4190, +,+,+,+,+, 656700 Satellite W-chromosome 585 chrUn_NT_467623v1 5645 10445 GGXHOI 406 + 5645 10445 0 5 832,1116,1077,940,767, 0,846,1982,3073,4033, +,+,+,+,+, 656701 Satellite W-chromosome 585 chrUn_NT_467623v1 10644 12005 GGXHOI 389 + 10644 12005 0 4 365,146,364,399, 0,380,549,962, +,+,+,+, 656702 Satellite W-chromosome 585 chrUn_NT_467626v1 3788 9637 GGERVL-B-int 897 + 3788 9637 0 3 36,494,5318, 0,36,531, +,+,+, 656718 LTR ERVL 585 chrUn_NT_467626v1 9672 12734 GGERVL-B-int 821 + 9672 12734 0 3 492,2047,382, 0,493,2680, +,+,+, 656719 LTR ERVL 585 chrUn_NT_467627v1 2707 2994 (ACCCATAGAG)n 524 + 2707 2994 0 2 62,102, 0,185, +,+, 656729 Satellite Satellite 585 chrUn_NT_467627v1 6101 6482 (CTCTATGGGG)n 518 + 6101 6482 0 3 120,114,111, 0,138,270, +,+,+, 656740 Satellite Satellite 585 chrUn_NT_467627v1 8703 9905 (ACCCATAGAG)n 629 + 8703 9905 0 2 889,313, 0,889, +,+, 656742 Satellite Satellite 585 chrUn_NT_467627v1 11458 11953 (ACCCCATAGGG)n 478 - 11458 11953 0 3 125,22,194, 0,260,301, -,-,-, 656747 Satellite Satellite 585 chrUn_NT_467627v1 12042 12556 (ACCCCATAGGG)n 638 - 12042 12556 0 3 162,129,195, 0,187,319, -,-,-, 656750 Satellite Satellite 585 chrUn_NT_467628v1 3181 4265 GGXHOI 341 - 3181 4265 0 3 134,476,418, 0,171,666, -,-,-, 656755 Satellite W-chromosome 585 chrUn_NT_467628v1 6852 7757 GGXHOI 358 - 6852 7757 0 2 464,380, 0,525, -,-, 656762 Satellite W-chromosome 585 chrUn_NT_467629v1 9358 10056 CR1-B2 704 - 9358 10056 0 2 469,226, 0,472, -,-, 656780 LINE CR1 585 chrUn_NT_467630v1 4624 5311 (CTCTATGGGG)n 652 + 4624 5311 0 2 150,91, 0,596, +,+, 656787 Satellite Satellite 585 chrUn_NT_467630v1 4875 5220 (ACCCATAGAG)n 490 - 4875 5220 0 2 94,132, 0,213, -,-, 656789 Satellite Satellite 585 chrUn_NT_467630v1 5679 6060 (CTCTATGGGG)n 647 - 5679 6060 0 2 117,248, 0,133, -,-, 656793 Satellite Satellite 585 chrUn_NT_467630v1 10248 10702 (ACCCCATAGGG)n 376 - 10248 10702 0 2 295,148, 0,306, -,-, 656804 Satellite Satellite 585 chrUn_NT_467630v1 12168 12733 (CTCTATGGGG)n 678 + 12168 12733 0 2 363,45, 0,520, +,+, 656806 Satellite Satellite 585 chrUn_NT_467631v1 5176 7338 GGLTR7-int 558 + 5176 7338 0 2 103,1593, 0,569, +,+, 656814 LTR ERV1 585 chrUn_NT_467631v1 7338 7868 GGLTR3F1 940 - 7338 7868 0 2 494,36, 0,494, -,-, 656817 LTR ERVL 585 chrUn_NT_467631v1 7868 12730 GGERVL-B-int 631 - 7868 12730 0 2 4061,692, 0,4170, -,-, 656818 LTR ERVL 585 chrUn_NT_467633v1 293 1009 GGXHOI 514 + 293 1009 0 2 584,111, 0,605, +,+, 656825 Satellite W-chromosome 585 chrUn_NT_467633v1 1075 1599 GGXHOI 385 + 1075 1599 0 2 257,210, 0,314, +,+, 656826 Satellite W-chromosome 585 chrUn_NT_467633v1 2018 2508 GGXHOI 395 + 2018 2508 0 2 372,105, 0,385, +,+, 656828 Satellite W-chromosome 585 chrUn_NT_467633v1 2661 3968 GGXHOI 512 + 2661 3968 0 2 778,514, 0,793, +,+, 656829 Satellite W-chromosome 585 chrUn_NT_467633v1 6509 7966 GGXHOI 566 + 6509 7966 0 2 210,1025, 0,432, +,+, 656832 Satellite W-chromosome 585 chrUn_NT_467633v1 8036 9440 GGXHOI 568 + 8036 9440 0 2 372,988, 0,416, +,+, 656834 Satellite W-chromosome 585 chrUn_NT_467633v1 9559 10457 GGXHOI 511 + 9559 10457 0 2 663,203, 0,695, +,+, 656835 Satellite W-chromosome 585 chrUn_NT_467634v1 5163 5376 A-rich 297 + 5163 5376 0 2 59,97, 0,116, +,+, 656854 Low_complexity Low_complexity 585 chrUn_NT_467636v1 3053 4409 (TTAGGG)n 743 + 3053 4409 0 4 168,113,166,526, 0,352,648,830, +,+,+,+, 656893 Simple_repeat Simple_repeat 585 chrUn_NT_467636v1 4433 5283 (TTAGGG)n 600 + 4433 5283 0 4 184,190,182,178, 0,211,455,672, +,+,+,+, 656898 Simple_repeat Simple_repeat 585 chrUn_NT_467636v1 5399 5795 (TTAGGG)n 628 + 5399 5795 0 2 174,188, 0,208, +,+, 656900 Simple_repeat Simple_repeat 585 chrUn_NT_467636v1 6116 8098 (TTAGGG)n 564 + 6116 8098 0 5 521,503,542,154,197, 0,533,1060,1613,1785, +,+,+,+,+, 656904 Simple_repeat Simple_repeat 585 chrUn_NT_467636v1 8187 8659 (TTAGGG)n 532 + 8187 8659 0 2 210,249, 0,223, +,+, 656906 Simple_repeat Simple_repeat 585 chrUn_NT_467636v1 9016 9428 GGLTR7A 659 + 9016 9428 0 2 76,334, 0,78, +,+, 656909 LTR ERV1 585 chrUn_NT_467636v1 12337 12435 (GCCTT)n 352 + 12337 12435 0 2 16,35, 0,63, +,+, 656924 Simple_repeat Simple_repeat 585 chrUn_NT_467638v1 2081 2236 CR1-H2 476 + 2081 2236 0 2 82,73, 0,82, +,+, 656938 LINE CR1 585 chrUn_NT_467638v1 2622 3011 CR1-F2 539 + 2622 3011 0 2 82,74, 0,315, +,+, 656939 LINE CR1 585 chrUn_NT_467638v1 3793 3948 CR1-H2 485 + 3793 3948 0 2 81,74, 0,81, +,+, 656946 LINE CR1 585 chrUn_NT_467638v1 4731 8839 CR1-Y4 275 - 4731 8839 0 2 410,139, 0,3969, -,-, 656948 LINE CR1 585 chrUn_NT_467638v1 12153 12529 (CAGGA)n 307 + 12153 12529 0 2 178,175, 0,201, +,+, 656952 Simple_repeat Simple_repeat 585 chrUn_NT_467639v1 1194 2387 GGXHOI 342 + 1194 2387 0 2 962,214, 0,979, +,+, 656956 Satellite W-chromosome 585 chrUn_NT_467639v1 3888 5228 GGXHOI 388 + 3888 5228 0 2 761,516, 0,824, +,+, 656960 Satellite W-chromosome 585 chrUn_NT_467639v1 5327 6378 GGXHOI 392 + 5327 6378 0 2 472,516, 0,535, +,+, 656961 Satellite W-chromosome 585 chrUn_NT_467639v1 6477 7528 GGXHOI 392 + 6477 7528 0 2 472,516, 0,535, +,+, 656962 Satellite W-chromosome 585 chrUn_NT_467639v1 7627 8678 GGXHOI 392 + 7627 8678 0 2 472,516, 0,535, +,+, 656963 Satellite W-chromosome 585 chrUn_NT_467639v1 8777 9828 GGXHOI 392 + 8777 9828 0 2 472,516, 0,535, +,+, 656964 Satellite W-chromosome 585 chrUn_NT_467639v1 9927 10978 GGXHOI 392 + 9927 10978 0 2 472,516, 0,535, +,+, 656965 Satellite W-chromosome 585 chrUn_NT_467639v1 11077 12619 GGXHOI 381 + 11077 12619 0 2 472,1007, 0,535, +,+, 656966 Satellite W-chromosome 585 chrUn_NT_467640v1 11175 12719 GGXHOI 594 - 11175 12719 0 4 247,146,522,48, 0,258,963,1496, -,-,-,-, 656978 Satellite W-chromosome 585 chrUn_NT_467642v1 1335 2011 GGLTR7A 794 + 1335 2011 0 2 87,581, 0,95, +,+, 656983 LTR ERV1 585 chrUn_NT_467642v1 3889 6483 GGERVL-B-int 778 + 3889 6483 0 4 208,48,997,918, 0,566,679,1676, +,+,+,+, 656986 LTR ERVL 585 chrUn_NT_467642v1 7260 8605 GGLTR7-int 390 + 7260 8605 0 3 59,261,269, 0,61,1076, +,+,+, 656988 LTR ERV1 585 chrUn_NT_467644v1 62 7583 Sat-CR1_GG 160 - 62 7583 0 2 367,3857, 0,3664, -,-, 656992 Satellite Satellite 585 chrUn_NT_467644v1 429 3726 GGXHOI 574 - 429 3726 0 2 737,2239, 0,1058, -,-, 656993 Satellite W-chromosome 585 chrUn_NT_467644v1 3768 12711 GGXHOI 554 - 3768 12711 0 5 4000,330,144,72,49, 0,4380,5217,5397,8894, -,-,-,-,-, 656994 Satellite W-chromosome 585 chrUn_NT_467645v1 5281 6290 CR1-B2 558 - 5281 6290 0 2 786,220, 0,789, -,-, 657003 LINE CR1 585 chrUn_NT_467645v1 12171 12711 CR1-B2 645 - 12171 12711 0 2 444,96, 0,444, -,-, 657009 LINE CR1 585 chrUn_NT_467646v1 1436 2579 CR1-F 782 + 1436 2579 0 2 332,292, 0,851, +,+, 657011 LINE CR1 585 chrUn_NT_467647v1 8043 9399 CR1-H 671 + 8043 9399 0 2 1243,113, 0,1243, +,+, 657030 LINE CR1 585 chrUn_NT_467648v1 319 1503 (CCTTG)n 620 + 319 1503 0 2 173,549, 0,635, +,+, 657036 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 2588 3331 (CCTTG)n 505 + 2588 3331 0 3 279,206,208, 0,329,535, +,+,+, 657044 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 3245 3611 (GCCTG)n 486 + 3245 3611 0 2 141,36, 0,330, +,+, 657045 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 3594 4223 (CCTTG)n 598 + 3594 4223 0 3 189,172,71, 0,201,558, +,+,+, 657047 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 4298 6274 (CCTTG)n 585 + 4298 6274 0 8 119,102,170,96,89,258,185,362, 0,257,532,721,996,1093,1381,1614, +,+,+,+,+,+,+,+, 657051 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 6336 6695 (CCTTG)n 474 + 6336 6695 0 2 114,63, 0,296, +,+, 657056 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 7298 8689 (CCTTG)n 553 + 7298 8689 0 5 170,35,197,211,521, 0,346,406,626,870, +,+,+,+,+, 657060 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 9191 10476 (CCTTG)n 619 + 9191 10476 0 5 413,198,65,132,131, 0,413,798,863,1154, +,+,+,+,+, 657065 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 10563 11878 (CCTTG)n 633 + 10563 11878 0 4 213,173,72,378, 0,213,851,937, +,+,+,+, 657069 Simple_repeat Simple_repeat 585 chrUn_NT_467648v1 12167 12689 (CCTTG)n 542 + 12167 12689 0 2 271,76, 0,446, +,+, 657075 Simple_repeat Simple_repeat 585 chrUn_NT_467649v1 394 1504 GGXHOI 414 - 394 1504 0 2 679,402, 0,708, -,-, 657079 Satellite W-chromosome 585 chrUn_NT_467649v1 3291 4107 GGXHOI 389 - 3291 4107 0 3 92,191,494, 0,110,322, -,-,-, 657084 Satellite W-chromosome 585 chrUn_NT_467649v1 4141 6111 GGXHOI 405 - 4141 6111 0 3 692,422,820, 0,711,1150, -,-,-, 657086 Satellite W-chromosome 585 chrUn_NT_467649v1 6145 7879 GGXHOI 394 - 6145 7879 0 3 899,306,491, 0,916,1243, -,-,-, 657088 Satellite W-chromosome 585 chrUn_NT_467649v1 8858 10400 GGXHOI 419 - 8858 10400 0 2 306,1215, 0,327, -,-, 657092 Satellite W-chromosome 585 chrUn_NT_467649v1 10480 12095 GGXHOI 381 - 10480 12095 0 3 126,305,1146, 0,143,469, -,-,-, 657093 Satellite W-chromosome 585 chrUn_NT_467652v1 1572 2309 (CGAGG)n 491 + 1572 2309 0 2 515,181, 0,556, +,+, 657120 Simple_repeat Simple_repeat 585 chrUn_NT_467652v1 4028 4711 (CGAGG)n 535 + 4028 4711 0 2 182,456, 0,227, +,+, 657126 Simple_repeat Simple_repeat 585 chrUn_NT_467652v1 5613 6718 (CGAGG)n 524 + 5613 6718 0 3 372,477,218, 0,410,887, +,+,+, 657129 Simple_repeat Simple_repeat 585 chrUn_NT_467652v1 6838 7660 (CGAGG)n 518 + 6838 7660 0 2 349,334, 0,488, +,+, 657131 Simple_repeat Simple_repeat 585 chrUn_NT_467652v1 9272 9744 (CGAGG)n 548 + 9272 9744 0 2 182,271, 0,201, +,+, 657143 Simple_repeat Simple_repeat 585 chrUn_NT_467652v1 11590 12557 (CGAGG)n 474 + 11590 12557 0 2 751,175, 0,792, +,+, 657150 Simple_repeat Simple_repeat 585 chrUn_NT_467653v1 2668 10227 GGXHOI 370 - 2668 10227 0 10 1322,589,347,792,509,700,141,803,776,1334, 0,1337,1952,2319,3171,3737,4450,4612,5428,6225, -,-,-,-,-,-,-,-,-,-, 657153 Satellite W-chromosome 585 chrUn_NT_467653v1 10369 11095 GGXHOI 349 - 10369 11095 0 2 528,187, 0,539, -,-, 657154 Satellite W-chromosome 585 chrUn_NT_467654v1 6332 12691 GGXHOI 396 - 6332 12691 0 6 933,1189,1773,833,366,1127, 0,951,2199,4001,4851,5232, -,-,-,-,-,-, 657165 Satellite W-chromosome 585 chrUn_NT_467656v1 408 942 (CAGGC)n 563 + 408 942 0 2 307,227, 0,307, +,+, 657173 Simple_repeat Simple_repeat 585 chrUn_NT_467656v1 964 1440 (CAAGG)n 612 + 964 1440 0 2 202,88, 0,388, +,+, 657175 Simple_repeat Simple_repeat 585 chrUn_NT_467656v1 7785 8359 G-rich 431 + 7785 8359 0 2 63,486, 0,88, +,+, 657188 Low_complexity Low_complexity 585 chrUn_NT_467657v1 5213 9424 GGXHOI 364 + 5213 9424 0 4 1081,1026,1092,834, 0,1142,2231,3377, +,+,+,+, 657200 Satellite W-chromosome 585 chrUn_NT_467658v1 9029 10514 GGLTR7B 557 + 9029 10514 0 2 890,126, 0,1359, +,+, 657223 LTR ERV1 585 chrUn_NT_467660v1 1658 2776 CR1-B2 668 - 1658 2776 0 2 888,227, 0,891, -,-, 657233 LINE CR1 585 chrUn_NT_467660v1 10674 11779 CR1-B2 658 - 10674 11779 0 2 882,220, 0,885, -,-, 657242 LINE CR1 585 chrUn_NT_467661v1 1183 2198 GGXHOI 351 + 1183 2198 0 3 298,144,538, 0,316,477, +,+,+, 657244 Satellite W-chromosome 585 chrUn_NT_467661v1 2318 2865 GGXHOI 352 + 2318 2865 0 2 180,350, 0,197, +,+, 657245 Satellite W-chromosome 585 chrUn_NT_467661v1 3328 5178 GGXHOI 388 + 3328 5178 0 4 300,549,761,147, 0,313,925,1703, +,+,+,+, 657246 Satellite W-chromosome 585 chrUn_NT_467661v1 5315 8158 GGXHOI 387 + 5315 8158 0 3 1942,720,147, 0,1959,2696, +,+,+, 657247 Satellite W-chromosome 585 chrUn_NT_467661v1 8834 10414 GGXHOI 403 + 8834 10414 0 2 1211,352, 0,1228, +,+, 657249 Satellite W-chromosome 585 chrUn_NT_467662v1 1462 2699 GGXHOI 407 - 1462 2699 0 4 138,129,96,789, 0,198,340,448, -,-,-,-, 657255 Satellite W-chromosome 585 chrUn_NT_467662v1 2792 4333 GGXHOI 335 - 2792 4333 0 6 226,159,248,319,301,161, 0,237,440,705,1037,1380, -,-,-,-,-,-, 657256 Satellite W-chromosome 585 chrUn_NT_467662v1 4410 8409 GGXHOI 411 - 4410 8409 0 11 752,175,165,596,229,378,154,233,403,156,478, 0,767,956,1166,1804,2050,2458,2664,2912,3347,3521, -,-,-,-,-,-,-,-,-,-,-, 657257 Satellite W-chromosome 585 chrUn_NT_467662v1 8535 12684 GGXHOI 399 - 8535 12684 0 10 639,808,150,373,136,711,347,224,260,249, 0,654,1487,1651,2056,2241,2965,3331,3600,3900, -,-,-,-,-,-,-,-,-,-, 657258 Satellite W-chromosome 585 chrUn_NT_467663v1 3850 4360 A-rich 595 + 3850 4360 0 2 413,38, 0,472, +,+, 657272 Low_complexity Low_complexity 585 chrUn_NT_467665v1 2251 3875 GGXHOI 358 + 2251 3875 0 2 767,801, 0,823, +,+, 657317 Satellite W-chromosome 585 chrUn_NT_467665v1 7844 9991 GGXHOI 345 + 7844 9991 0 2 804,1325, 0,822, +,+, 657322 Satellite W-chromosome 585 chrUn_NT_467665v1 10780 11334 GGXHOI 383 + 10780 11334 0 2 267,270, 0,284, +,+, 657324 Satellite W-chromosome 585 chrUn_NT_467665v1 12262 12669 GGXHOI 287 + 12262 12669 0 2 153,215, 0,192, +,+, 657326 Satellite W-chromosome 585 chrUn_NT_467666v1 4104 4725 CR1-H 683 - 4104 4725 0 2 139,476, 0,145, -,-, 657330 LINE CR1 585 chrUn_NT_467666v1 7532 7988 CR1-H 673 - 7532 7988 0 2 163,293, 0,163, -,-, 657334 LINE CR1 585 chrUn_NT_467668v1 3804 4436 G-rich 418 + 3804 4436 0 2 38,547, 0,85, +,+, 657350 Low_complexity Low_complexity 585 chrUn_NT_467670v1 521 3669 GGXHOI 546 + 521 3669 0 6 273,276,247,193,297,315, 0,502,1101,1795,2310,2833, +,+,+,+,+,+, 657357 Satellite W-chromosome 585 chrUn_NT_467670v1 4076 8725 GGXHOI 530 + 4076 8725 0 8 283,194,879,297,430,252,190,26, 0,603,1119,2266,2831,3444,4123,4623, +,+,+,+,+,+,+,+, 657364 Satellite W-chromosome 585 chrUn_NT_467670v1 8795 9896 GGXHOI 566 + 8795 9896 0 3 202,357,125, 0,418,976, +,+,+, 657372 Satellite W-chromosome 585 chrUn_NT_467670v1 9971 11043 GGXHOI 513 + 9971 11043 0 2 586,24, 0,1048, +,+, 657375 Satellite W-chromosome 585 chrUn_NT_467670v1 11712 12233 GGXHOI 582 + 11712 12233 0 2 192,19, 0,502, +,+, 657378 Satellite W-chromosome 585 chrUn_NT_467672v1 4713 12337 GGXHOI 574 - 4713 12337 0 15 30,81,157,56,52,365,457,460,174,149,36,295,148,194,504, 0,496,588,1100,1372,1466,2503,3632,4889,5074,5653,5900,6206,6910,7120, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 657394 Satellite W-chromosome 585 chrUn_NT_467673v1 11781 11924 (CACTC)n 114 + 11781 11924 0 2 13,83, 0,60, +,+, 657444 Simple_repeat Simple_repeat 585 chrUn_NT_467675v1 3006 3522 GGXHOI 284 + 3006 3522 0 3 184,136,135, 0,230,381, +,+,+, 657472 Satellite W-chromosome 585 chrUn_NT_467675v1 4305 4675 GGXHOI 355 + 4305 4675 0 2 160,170, 0,200, +,+, 657474 Satellite W-chromosome 585 chrUn_NT_467675v1 5439 8132 GGXHOI 408 + 5439 8132 0 2 2052,623, 0,2070, +,+, 657476 Satellite W-chromosome 585 chrUn_NT_467675v1 8196 9527 GGXHOI 371 + 8196 9527 0 3 138,110,1011, 0,167,320, +,+,+, 657477 Satellite W-chromosome 585 chrUn_NT_467675v1 10764 11102 GGXHOI 349 + 10764 11102 0 2 126,156, 0,182, +,+, 657480 Satellite W-chromosome 585 chrUn_NT_467676v1 10885 12645 GGLTR7-int 681 + 10885 12645 0 2 338,100, 0,1660, +,+, 657494 LTR ERV1 585 chrUn_NT_467677v1 1730 3345 GGXHOI 383 - 1730 3345 0 2 511,1041, 0,574, -,-, 657499 Satellite W-chromosome 585 chrUn_NT_467677v1 4633 5835 GGXHOI 376 - 4633 5835 0 2 669,470, 0,732, -,-, 657502 Satellite W-chromosome 585 chrUn_NT_467677v1 9372 11476 GGXHOI 374 - 9372 11476 0 3 511,1084,384, 0,573,1720, -,-,-, 657507 Satellite W-chromosome 585 chrUn_NT_467678v1 445 2476 GGXHOI 385 + 445 2476 0 2 1082,929, 0,1102, +,+, 657511 Satellite W-chromosome 585 chrUn_NT_467678v1 3184 4969 GGXHOI 381 + 3184 4969 0 3 1459,146,146, 0,1476,1639, +,+,+, 657513 Satellite W-chromosome 585 chrUn_NT_467678v1 6161 7594 GGXHOI 374 + 6161 7594 0 4 231,646,139,342, 0,272,935,1091, +,+,+,+, 657515 Satellite W-chromosome 585 chrUn_NT_467678v1 7773 9483 GGXHOI 312 + 7773 9483 0 2 1445,248, 0,1462, +,+, 657516 Satellite W-chromosome 585 chrUn_NT_467678v1 10833 11069 GGXHOI 370 + 10833 11069 0 2 79,145, 0,91, +,+, 657519 Satellite W-chromosome 585 chrUn_NT_467678v1 11207 12293 GGXHOI 393 + 11207 12293 0 2 673,351, 0,735, +,+, 657520 Satellite W-chromosome 585 chrUn_NT_467679v1 910 1303 (CAAGG)n 611 + 910 1303 0 2 180,213, 0,180, +,+, 657526 Simple_repeat Simple_repeat 585 chrUn_NT_467679v1 1538 2099 (CAAGG)n 579 + 1538 2099 0 3 181,89,65, 0,214,496, +,+,+, 657528 Simple_repeat Simple_repeat 585 chrUn_NT_467681v1 4366 5403 CR1-B2 706 - 4366 5403 0 2 809,225, 0,812, -,-, 657546 LINE CR1 585 chrUn_NT_467681v1 10838 12197 CR1-X 455 - 10838 12197 0 3 77,172,106, 0,77,1253, -,-,-, 657552 LINE CR1 585 chrUn_NT_467682v1 3319 5103 GGXHOI 369 - 3319 5103 0 3 1008,280,421, 0,1042,1363, -,-,-, 657555 Satellite W-chromosome 585 chrUn_NT_467682v1 5227 6218 GGXHOI 413 - 5227 6218 0 2 754,216, 0,775, -,-, 657556 Satellite W-chromosome 585 chrUn_NT_467682v1 7582 12633 GGXHOI 402 - 7582 12633 0 8 525,140,218,1516,155,1413,726,205, 0,571,740,975,2508,2674,4104,4846, -,-,-,-,-,-,-,-, 657560 Satellite W-chromosome 585 chrUn_NT_467683v1 2420 2546 (CCCAAT)n 262 + 2420 2546 0 2 20,31, 0,95, +,+, 657563 Simple_repeat Simple_repeat 585 chrUn_NT_467683v1 7497 8373 CR1-F0 843 - 7497 8373 0 2 144,732, 0,144, -,-, 657571 LINE CR1 585 chrUn_NT_467683v1 8418 8923 (CCTTG)n 572 + 8418 8923 0 2 290,37, 0,468, +,+, 657573 Simple_repeat Simple_repeat 585 chrUn_NT_467683v1 9211 9571 (GCCTG)n 530 + 9211 9571 0 2 96,85, 0,275, +,+, 657577 Simple_repeat Simple_repeat 585 chrUn_NT_467683v1 9497 10159 (CCTTG)n 440 + 9497 10159 0 2 91,232, 0,430, +,+, 657579 Simple_repeat Simple_repeat 585 chrUn_NT_467683v1 10463 10877 GGLTR7A 815 + 10463 10877 0 2 165,242, 0,172, +,+, 657585 LTR ERV1 585 chrUn_NT_467683v1 11396 12174 GGLTR7A 737 + 11396 12174 0 2 197,580, 0,198, +,+, 657587 LTR ERV1 585 chrUn_NT_467684v1 337 3477 GGXHOI 378 - 337 3477 0 4 923,220,729,464, 0,960,1925,2676, -,-,-,-, 657589 Satellite W-chromosome 585 chrUn_NT_467684v1 9089 9944 GGXHOI 417 - 9089 9944 0 2 198,625, 0,230, -,-, 657598 Satellite W-chromosome 585 chrUn_NT_467686v1 11700 12621 GGXHOI 406 + 11700 12621 0 2 589,278, 0,643, +,+, 657616 Satellite W-chromosome 585 chrUn_NT_467687v1 6012 6469 CR1-H 677 + 6012 6469 0 2 296,161, 0,296, +,+, 657624 LINE CR1 585 chrUn_NT_467687v1 9043 9666 CR1-H 683 + 9043 9666 0 2 478,139, 0,484, +,+, 657629 LINE CR1 585 chrUn_NT_467688v1 1220 8302 GGXHOI 415 + 1220 8302 0 6 686,148,982,2981,731,1450, 0,701,868,1865,4861,5632, +,+,+,+,+,+, 657635 Satellite W-chromosome 585 chrUn_NT_467688v1 8387 10464 GGXHOI 420 + 8387 10464 0 4 338,146,907,647, 0,349,508,1430, +,+,+,+, 657636 Satellite W-chromosome 585 chrUn_NT_467688v1 10549 12597 GGXHOI 347 + 10549 12597 0 4 333,1065,391,208, 0,348,1428,1840, +,+,+,+, 657637 Satellite W-chromosome 585 chrUn_NT_467689v1 3355 4889 GGERVL-B-int 774 + 3355 4889 0 2 84,1449, 0,85, +,+, 657642 LTR ERVL 585 chrUn_NT_467689v1 5637 7035 GGLTR7-int 286 + 5637 7035 0 3 99,296,289, 0,127,1109, +,+,+, 657645 LTR ERV1 585 chrUn_NT_467690v1 6212 12589 GGXHOI 381 - 6212 12589 0 6 1637,1414,1626,632,598,316, 0,1679,3149,4789,5436,6061, -,-,-,-,-,-, 657651 Satellite W-chromosome 585 chrUn_NT_467692v1 4641 7047 GGLTR3F1 759 + 4641 7047 0 2 492,1912, 0,494, +,+, 657672 LTR ERVL 585 chrUn_NT_467695v1 11233 11514 CR1-X2 410 - 11233 11514 0 2 216,65, 0,216, -,-, 657701 LINE CR1 585 chrUn_NT_467696v1 845 1411 GGXHOI 403 - 845 1411 0 2 353,193, 0,373, -,-, 657705 Satellite W-chromosome 585 chrUn_NT_467696v1 1510 9133 GGXHOI 405 - 1510 9133 0 7 1961,150,721,804,545,1966,1334, 0,1983,2145,2883,3699,4266,6289, -,-,-,-,-,-,-, 657706 Satellite W-chromosome 585 chrUn_NT_467696v1 9261 10587 GGXHOI 340 - 9261 10587 0 3 181,609,509, 0,192,817, -,-,-, 657707 Satellite W-chromosome 585 chrUn_NT_467696v1 10684 12606 GGXHOI 406 - 10684 12606 0 5 227,63,1110,260,201, 0,242,326,1448,1721, -,-,-,-,-, 657708 Satellite W-chromosome 585 chrUn_NT_467698v1 2475 2778 GGXHOI 296 . 2475 2778 0 2 145,139, 0,164, +,-, 657718 Satellite W-chromosome 585 chrUn_NT_467698v1 4481 5015 Sat-CR1_GG 232 - 4481 5015 0 2 279,64, 0,470, -,-, 657724 Satellite Satellite 585 chrUn_NT_467698v1 6177 6492 GGXHOI 297 . 6177 6492 0 2 154,142, 0,173, +,-, 657728 Satellite W-chromosome 585 chrUn_NT_467698v1 9728 10045 GGXHOI 313 . 9728 10045 0 2 154,144, 0,173, +,-, 657736 Satellite W-chromosome 585 chrUn_NT_467698v1 9931 10444 Sat-CR1_GG 208 - 9931 10444 0 2 257,65, 0,448, -,-, 657737 Satellite Satellite 585 chrUn_NT_467698v1 11816 12314 Sat-CR1_GG 194 - 11816 12314 0 2 148,64, 0,434, -,-, 657743 Satellite Satellite 585 chrUn_NT_467702v1 2743 4109 GGXHOI 373 - 2743 4109 0 3 211,426,662, 0,260,704, -,-,-, 657799 Satellite W-chromosome 585 chrUn_NT_467702v1 4182 7220 GGXHOI 358 - 4182 7220 0 6 373,807,965,388,230,145, 0,395,1263,2247,2651,2893, -,-,-,-,-,-, 657800 Satellite W-chromosome 585 chrUn_NT_467702v1 7285 9150 GGXHOI 356 - 7285 9150 0 3 767,699,353, 0,800,1512, -,-,-, 657801 Satellite W-chromosome 585 chrUn_NT_467702v1 10007 10416 GGXHOI 344 - 10007 10416 0 2 284,100, 0,309, -,-, 657803 Satellite W-chromosome 585 chrUn_NT_467702v1 10489 11696 GGXHOI 435 - 10489 11696 0 4 162,141,633,220, 0,174,336,987, -,-,-,-, 657804 Satellite W-chromosome 585 chrUn_NT_467703v1 9279 11380 CR1-B2 583 - 9279 11380 0 2 132,194, 0,1907, -,-, 657811 LINE CR1 585 chrUn_NT_467704v1 5798 11986 GGERVL-B-int 822 + 5798 11986 0 5 38,490,3518,1635,487, 0,38,529,4066,5701, +,+,+,+,+, 657815 LTR ERVL 585 chrUn_NT_467705v1 3144 4918 GGXHOI 352 - 3144 4918 0 2 1488,224, 0,1550, -,-, 657818 Satellite W-chromosome 585 chrUn_NT_467705v1 4988 8571 GGXHOI 376 - 4988 8571 0 6 352,1135,333,107,1347,150, 0,369,1561,1937,2064,3433, -,-,-,-,-,-, 657819 Satellite W-chromosome 585 chrUn_NT_467705v1 8666 10256 GGXHOI 447 - 8666 10256 0 2 1447,119, 0,1471, -,-, 657820 Satellite W-chromosome 585 chrUn_NT_467705v1 10532 12587 GGXHOI 318 - 10532 12587 0 2 128,1905, 0,150, -,-, 657821 Satellite W-chromosome 585 chrUn_NT_467707v1 520 1169 G-rich 431 + 520 1169 0 2 39,555, 0,94, +,+, 657825 Low_complexity Low_complexity 585 chrUn_NT_467708v1 765 1409 CR1-X2 587 + 765 1409 0 2 352,63, 0,581, +,+, 657840 LINE CR1 585 chrUn_NT_467709v1 5493 7820 GGLTR7-int 437 + 5493 7820 0 2 270,796, 0,1531, +,+, 657855 LTR ERV1 585 chrUn_NT_467709v1 7832 10248 GGERV10_LTR 848 - 7832 10248 0 2 38,40, 0,2376, -,-, 657858 LTR ERVL 585 chrUn_NT_467709v1 7998 10207 GGLTR10D-int 923 - 7998 10207 0 2 362,1841, 0,368, -,-, 657859 LTR ERVK 585 chrUn_NT_467709v1 10268 10644 (CGAGG)n 550 + 10268 10644 0 2 181,183, 0,193, +,+, 657860 Simple_repeat Simple_repeat 585 chrUn_NT_467709v1 11188 11721 (CGAGG)n 526 + 11188 11721 0 2 186,329, 0,204, +,+, 657864 Simple_repeat Simple_repeat 585 chrUn_NT_467709v1 11818 12087 (CGAGG)n 420 + 11818 12087 0 2 175,83, 0,186, +,+, 657866 Simple_repeat Simple_repeat 585 chrUn_NT_467709v1 12133 12586 (CGAGG)n 444 + 12133 12586 0 2 250,186, 0,267, +,+, 657868 Simple_repeat Simple_repeat 585 chrUn_NT_467710v1 1738 3330 GGXHOI 390 + 1738 3330 0 2 505,1038, 0,554, +,+, 657874 Satellite W-chromosome 585 chrUn_NT_467710v1 5552 6559 GGXHOI 389 + 5552 6559 0 2 401,559, 0,448, +,+, 657881 Satellite W-chromosome 585 chrUn_NT_467710v1 10527 11003 GGXHOI 350 + 10527 11003 0 2 155,304, 0,172, +,+, 657891 Satellite W-chromosome 585 chrUn_NT_467710v1 11951 12590 GGXHOI 416 + 11951 12590 0 2 284,305, 0,334, +,+, 657894 Satellite W-chromosome 585 chrUn_NT_467711v1 2321 9892 GGXHOI 420 - 2321 9892 0 16 559,392,108,979,432,64,944,433,64,335,610,432,64,1433,64,332, 0,572,1011,1134,2126,2578,2699,3656,4109,4188,4553,5176,5628,5707,7160,7239, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 657896 Satellite W-chromosome 585 chrUn_NT_467711v1 9980 12588 GGXHOI 445 - 9980 12588 0 3 1007,64,1502, 0,1027,1106, -,-,-, 657897 Satellite W-chromosome 585 chrUn_NT_467712v1 11153 11530 (CATAG)n 440 + 11153 11530 0 2 150,40, 0,337, +,+, 657917 Simple_repeat Simple_repeat 585 chrUn_NT_467712v1 12355 12555 G-rich 523 + 12355 12555 0 2 129,27, 0,173, +,+, 657922 Low_complexity Low_complexity 585 chrUn_NT_467713v1 107 592 (CTCTATGGGG)n 657 - 107 592 0 3 78,21,91, 0,326,394, -,-,-, 657924 Satellite Satellite 585 chrUn_NT_467713v1 1106 1598 (ACCCATAGAG)n 524 + 1106 1598 0 2 320,52, 0,440, +,+, 657930 Satellite Satellite 585 chrUn_NT_467713v1 1970 2263 (ACCCCATAGGG)n 594 + 1970 2263 0 2 117,53, 0,240, +,+, 657933 Satellite Satellite 585 chrUn_NT_467713v1 2275 2620 (CTCTATGGGG)n 692 - 2275 2620 0 2 121,182, 0,163, -,-, 657935 Satellite Satellite 585 chrUn_NT_467713v1 7252 9276 (CTCTATGGGG)n 555 - 7252 9276 0 7 239,419,140,236,142,21,22, 0,359,791,931,1223,1621,2002, -,-,-,-,-,-,-, 657942 Satellite Satellite 585 chrUn_NT_467717v1 2618 4916 ENS3-int 935 - 2618 4916 0 3 929,880,486, 0,929,1812, -,-,-, 657972 LTR ERVL 585 chrUn_NT_467717v1 4913 7212 ENS3-int 937 - 4913 7212 0 3 929,880,490, 0,929,1809, -,-,-, 657973 LTR ERVL 585 chrUn_NT_467717v1 7209 9508 ENS3-int 941 - 7209 9508 0 3 929,879,491, 0,929,1808, -,-,-, 657974 LTR ERVL 585 chrUn_NT_467717v1 9505 11802 ENS3-int 935 - 9505 11802 0 3 929,879,489, 0,929,1808, -,-,-, 657975 LTR ERVL 585 chrUn_NT_467723v1 3502 3749 Char12Mar1_GG 508 - 3502 3749 0 2 72,175, 0,72, -,-, 658028 DNA hAT-Charlie 585 chrUn_NT_467724v1 8369 8901 GGXHOI 556 + 8369 8901 0 2 248,19, 0,513, +,+, 658046 Satellite W-chromosome 585 chrUn_NT_467724v1 8976 10320 GGXHOI 496 + 8976 10320 0 2 564,465, 0,879, +,+, 658048 Satellite W-chromosome 585 chrUn_NT_467724v1 10428 11959 GGXHOI 396 + 10428 11959 0 3 226,869,140, 0,497,1391, +,+,+, 658050 Satellite W-chromosome 585 chrUn_NT_467725v1 423 6310 GGXHOI 409 - 423 6310 0 8 507,268,1167,613,279,457,1625,704, 0,563,843,2066,2727,3025,3540,5183, -,-,-,-,-,-,-,-, 658054 Satellite W-chromosome 585 chrUn_NT_467725v1 10181 11682 GGXHOI 405 - 10181 11682 0 3 271,742,452, 0,289,1049, -,-,-, 658060 Satellite W-chromosome 585 chrUn_NT_467726v1 9085 11413 GGXHOI 289 + 9085 11413 0 6 796,147,462,261,305,235, 0,809,970,1453,1777,2093, +,+,+,+,+,+, 658071 Satellite W-chromosome 585 chrUn_NT_467726v1 11481 12473 GGXHOI 356 + 11481 12473 0 3 528,175,257, 0,544,735, +,+,+, 658072 Satellite W-chromosome 585 chrUn_NT_467727v1 982 3390 GGXHOI 374 + 982 3390 0 5 524,390,534,547,270, 0,585,996,1576,2138, +,+,+,+,+, 658076 Satellite W-chromosome 585 chrUn_NT_467727v1 3802 12117 GGXHOI 416 + 3802 12117 0 9 413,975,757,412,1136,1142,1143,1144,1021, 0,433,1422,2217,2649,3805,4967,6130,7294, +,+,+,+,+,+,+,+,+, 658078 Satellite W-chromosome 585 chrUn_NT_467728v1 4651 7897 GGXHOI 564 + 4651 7897 0 2 3075,158, 0,3088, +,+, 658084 Satellite W-chromosome 585 chrUn_NT_467728v1 7963 8711 GGXHOI 500 + 7963 8711 0 3 347,12,140, 0,547,608, +,+,+, 658085 Satellite W-chromosome 585 chrUn_NT_467728v1 10165 11937 GGXHOI 536 + 10165 11937 0 2 317,1392, 0,380, +,+, 658089 Satellite W-chromosome 585 chrUn_NT_467730v1 5244 5986 CR1-F 266 + 5244 5986 0 2 173,569, 0,173, +,+, 658111 LINE CR1 585 chrUn_NT_467731v1 11257 11348 (C)n 810 + 11257 11348 0 2 30,26, 0,65, +,+, 658122 Simple_repeat Simple_repeat 585 chrUn_NT_467731v1 11453 11568 (C)n 697 + 11453 11568 0 2 55,24, 0,91, +,+, 658123 Simple_repeat Simple_repeat 585 chrUn_NT_467732v1 3667 6811 GGLTR7-int 815 + 3667 6811 0 3 2237,293,613, 0,2237,2531, +,+,+, 658131 LTR ERV1 585 chrUn_NT_467733v1 10783 12281 GGXHOI 350 + 10783 12281 0 2 1140,329, 0,1169, +,+, 658137 Satellite W-chromosome 585 chrUn_NT_467735v1 8924 10284 CR1-H 636 + 8924 10284 0 2 1246,114, 0,1246, +,+, 658160 LINE CR1 585 chrUn_NT_467737v1 138 2231 GGXHOI 435 - 138 2231 0 2 1106,970, 0,1123, -,-, 658174 Satellite W-chromosome 585 chrUn_NT_467737v1 2249 6949 ENS1-LTR 933 + 2249 6949 0 3 933,2834,933, 0,933,3767, +,+,+, 658175 LTR ERVL 585 chrUn_NT_467738v1 8078 8625 (CCCCATTGGG)n 423 + 8078 8625 0 3 120,116,220, 0,165,327, +,+,+, 658199 Satellite Satellite 585 chrUn_NT_467741v1 260 479 (CTCTATGGGG)n 517 + 260 479 0 2 88,108, 0,111, +,+, 658224 Satellite Satellite 585 chrUn_NT_467741v1 628 1368 (CTCTATGGGG)n 505 + 628 1368 0 5 121,131,53,114,213, 0,155,311,388,527, +,+,+,+,+, 658226 Satellite Satellite 585 chrUn_NT_467741v1 1456 1740 (CTCTATGGGG)n 462 + 1456 1740 0 2 155,108, 0,176, +,+, 658227 Satellite Satellite 585 chrUn_NT_467741v1 1828 2204 (CTCTATGGGG)n 479 + 1828 2204 0 3 57,131,109, 0,111,267, +,+,+, 658229 Satellite Satellite 585 chrUn_NT_467741v1 2586 4331 (CTCTATGGGG)n 462 + 2586 4331 0 4 59,108,96,135, 0,1348,1473,1610, +,+,+,+, 658231 Satellite Satellite 585 chrUn_NT_467741v1 4658 4922 (CTCTATGGGG)n 470 + 4658 4922 0 2 132,106, 0,158, +,+, 658243 Satellite Satellite 585 chrUn_NT_467741v1 5185 7362 (CTCTATGGGG)n 606 + 5185 7362 0 4 44,120,90,116, 0,1782,1926,2061, +,+,+,+, 658245 Satellite Satellite 585 chrUn_NT_467741v1 7722 9480 (CTCTATGGGG)n 553 + 7722 9480 0 6 213,103,57,120,90,116, 0,236,360,1363,1507,1642, +,+,+,+,+,+, 658256 Satellite Satellite 585 chrUn_NT_467741v1 8221 8630 (CTCTATGGGG)n 512 + 8221 8630 0 3 114,124,102, 0,149,307, +,+,+, 658257 Satellite Satellite 585 chrUn_NT_467741v1 9840 10257 (CTCTATGGGG)n 585 + 9840 10257 0 3 213,103,57, 0,236,360, +,+,+, 658261 Satellite Satellite 585 chrUn_NT_467741v1 10720 11555 (CTCTATGGGG)n 487 + 10720 11555 0 6 91,120,131,108,96,119, 0,117,291,447,572,716, +,+,+,+,+,+, 658263 Satellite Satellite 585 chrUn_NT_467741v1 12143 12406 (CTCTATGGGG)n 382 + 12143 12406 0 2 131,107, 0,156, +,+, 658266 Satellite Satellite 585 chrUn_NT_467742v1 170 540 (CCTTG)n 528 + 170 540 0 2 179,178, 0,192, +,+, 658269 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 1481 2436 (CAAGG)n 503 + 1481 2436 0 3 262,374,259, 0,305,696, +,+,+, 658273 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 2524 2784 (CCTTG)n 498 + 2524 2784 0 2 178,24, 0,236, +,+, 658274 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 2837 3483 (CCTTG)n 521 + 2837 3483 0 3 293,112,54, 0,310,592, +,+,+, 658276 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 3917 4230 (GCCTG)n 368 + 3917 4230 0 2 90,41, 0,272, +,+, 658280 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 4970 5602 (CAAGG)n 545 + 4970 5602 0 2 294,338, 0,294, +,+, 658287 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 6689 7313 (CAAGG)n 536 + 6689 7313 0 2 373,225, 0,399, +,+, 658297 Simple_repeat Simple_repeat 585 chrUn_NT_467742v1 7386 8234 (CCTTG)n 520 + 7386 8234 0 3 59,404,54, 0,108,794, +,+,+, 658298 Simple_repeat Simple_repeat 585 chrUn_NT_467743v1 1127 1513 (ACCCCATAGGG)n 374 - 1127 1513 0 2 223,131, 0,255, -,-, 658310 Satellite Satellite 585 chrUn_NT_467743v1 1757 2278 (ACCCCATAGGG)n 198 - 1757 2278 0 4 23,126,129,153, 0,60,210,368, -,-,-,-, 658311 Satellite Satellite 585 chrUn_NT_467744v1 7142 7442 GA-rich 424 + 7142 7442 0 2 238,28, 0,272, +,+, 658346 Low_complexity Low_complexity 585 chrUn_NT_467745v1 79 2148 (CAAGG)n 590 + 79 2148 0 8 181,121,190,150,27,78,220,272, 0,217,412,602,1076,1283,1397,1797, +,+,+,+,+,+,+,+, 658354 Simple_repeat Simple_repeat 585 chrUn_NT_467745v1 2171 3472 (CAAGG)n 600 + 2171 3472 0 5 388,285,24,182,178, 0,388,849,909,1123, +,+,+,+,+, 658361 Simple_repeat Simple_repeat 585 chrUn_NT_467747v1 8021 9146 CR1-B2 692 - 8021 9146 0 2 897,225, 0,900, -,-, 658390 LINE CR1 585 chrUn_NT_467748v1 4142 9479 GGXHOI 370 - 4142 9479 0 10 495,121,141,920,551,822,225,886,190,786, 0,539,681,839,1784,2358,3196,3433,4349,4551, -,-,-,-,-,-,-,-,-,-, 658393 Satellite W-chromosome 585 chrUn_NT_467748v1 9574 12391 GGXHOI 386 - 9574 12391 0 3 1064,623,1070, 0,1088,1747, -,-,-, 658394 Satellite W-chromosome 585 chrUn_NT_467751v1 4360 6116 GGXHOI 347 + 4360 6116 0 3 1432,145,145, 0,1450,1611, +,+,+, 658401 Satellite W-chromosome 585 chrUn_NT_467751v1 7514 8336 GGXHOI 351 + 7514 8336 0 2 422,383, 0,439, +,+, 658404 Satellite W-chromosome 585 chrUn_NT_467751v1 9641 11228 GGXHOI 333 + 9641 11228 0 3 429,150,974, 0,446,613, +,+,+, 658408 Satellite W-chromosome 585 chrUn_NT_467753v1 5561 7980 GGERV10_LTR 848 - 5561 7980 0 2 38,41, 0,2378, -,-, 658461 LTR ERVL 585 chrUn_NT_467753v1 5727 7938 GGLTR10D-int 911 - 5727 7938 0 2 360,1848, 0,363, -,-, 658462 LTR ERVK 585 chrUn_NT_467753v1 7977 9652 (CGAGG)n 567 + 7977 9652 0 4 127,295,285,186, 0,394,1158,1489, +,+,+,+, 658463 Simple_repeat Simple_repeat 585 chrUn_NT_467753v1 9721 11940 (CGAGG)n 539 + 9721 11940 0 4 1657,204,174,142, 0,1672,1892,2077, +,+,+,+, 658468 Simple_repeat Simple_repeat 585 chrUn_NT_467757v1 644 1777 GGXHOI 584 + 644 1777 0 3 281,190,17, 0,604,1116, +,+,+, 658506 Satellite W-chromosome 585 chrUn_NT_467757v1 1842 7805 GGXHOI 542 + 1842 7805 0 11 207,194,247,194,297,194,303,213,249,198,17, 0,604,1121,1815,2332,3026,3532,4223,4729,5423,5946, +,+,+,+,+,+,+,+,+,+,+, 658509 Satellite W-chromosome 585 chrUn_NT_467757v1 7875 8997 GGXHOI 496 + 7875 8997 0 2 679,250, 0,872, +,+, 658520 Satellite W-chromosome 585 chrUn_NT_467757v1 9069 9764 GGXHOI 408 + 9069 9764 0 2 39,347, 0,348, +,+, 658522 Satellite W-chromosome 585 chrUn_NT_467757v1 10020 11501 GGXHOI 522 + 10020 11501 0 3 249,221,465, 0,502,1016, +,+,+, 658525 Satellite W-chromosome 585 chrUn_NT_467760v1 10098 10218 (C)n 718 + 10098 10218 0 2 36,23, 0,97, +,+, 658555 Simple_repeat Simple_repeat 585 chrUn_NT_467761v1 1550 1868 GGERV10_LTR 555 + 1550 1868 0 2 75,155, 0,163, +,+, 658564 LTR ERVL 585 chrUn_NT_467761v1 8185 11786 GGERV28_I-int 222 + 8185 11786 0 5 64,642,409,191,775, 0,527,1437,2339,2826, +,+,+,+,+, 658567 LTR ERVK 585 chrUn_NT_467761v1 12133 12505 GGLTR7A 769 + 12133 12505 0 2 213,137, 0,235, +,+, 658568 LTR ERV1 585 chrUn_NT_467763v1 1456 2446 GGXHOI 420 - 1456 2446 0 3 421,271,224, 0,439,766, -,-,-, 658572 Satellite W-chromosome 585 chrUn_NT_467763v1 3301 5114 GGXHOI 415 - 3301 5114 0 3 470,657,650, 0,486,1163, -,-,-, 658574 Satellite W-chromosome 585 chrUn_NT_467763v1 5206 5967 GGXHOI 412 - 5206 5967 0 2 269,474, 0,287, -,-, 658575 Satellite W-chromosome 585 chrUn_NT_467763v1 6189 7058 GGXHOI 372 - 6189 7058 0 2 257,595, 0,274, -,-, 658576 Satellite W-chromosome 585 chrUn_NT_467763v1 7736 8448 GGXHOI 432 - 7736 8448 0 2 431,265, 0,447, -,-, 658578 Satellite W-chromosome 585 chrUn_NT_467763v1 9061 10340 GGXHOI 413 - 9061 10340 0 2 268,993, 0,286, -,-, 658580 Satellite W-chromosome 585 chrUn_NT_467763v1 11150 11798 GGXHOI 413 - 11150 11798 0 2 267,322, 0,326, -,-, 658582 Satellite W-chromosome 585 chrUn_NT_467763v1 11891 12482 GGXHOI 418 - 11891 12482 0 2 270,303, 0,288, -,-, 658583 Satellite W-chromosome 585 chrUn_NT_467766v1 4954 6703 GGERVL-A-int 727 + 4954 6703 0 2 461,1288, 0,461, +,+, 658592 LTR ERVL 585 chrUn_NT_467767v1 1215 2925 GGERVL-A-int 703 + 1215 2925 0 2 449,1261, 0,449, +,+, 658596 LTR ERVL 585 chrUn_NT_467768v1 6577 8335 CR1-X 401 - 6577 8335 0 4 270,124,171,98, 0,270,394,1660, -,-,-,-, 658617 LINE CR1 585 chrUn_NT_467768v1 12166 12482 CR1-B2 659 + 12166 12482 0 2 217,66, 0,250, +,+, 658619 LINE CR1 585 chrUn_NT_467769v1 3732 7162 GGXHOI 371 - 3732 7162 0 3 559,1786,1049, 0,577,2381, -,-,-, 658622 Satellite W-chromosome 585 chrUn_NT_467769v1 9156 12484 GGXHOI 355 - 9156 12484 0 3 559,1787,943, 0,577,2385, -,-,-, 658624 Satellite W-chromosome 585 chrUn_NT_467771v1 647 1072 GGLTR7A 885 + 647 1072 0 2 174,251, 0,174, +,+, 658636 LTR ERV1 585 chrUn_NT_467771v1 1592 2531 GGLTR7A 709 + 1592 2531 0 2 409,518, 0,421, +,+, 658638 LTR ERV1 585 chrUn_NT_467771v1 4867 7431 GGERVL-B-int 771 + 4867 7431 0 4 317,53,1078,749, 0,684,737,1815, +,+,+,+, 658642 LTR ERVL 585 chrUn_NT_467771v1 7433 8782 GGLTR7-int 417 + 7433 8782 0 3 61,209,278, 0,87,1071, +,+,+, 658643 LTR ERV1 585 chrUn_NT_467772v1 4471 4557 G-rich 584 + 4471 4557 0 2 34,34, 0,52, +,+, 658651 Low_complexity Low_complexity 585 chrUn_NT_467774v1 1037 7291 GGXHOI 415 - 1037 7291 0 4 281,2423,1144,2347, 0,300,2749,3907, -,-,-,-, 658675 Satellite W-chromosome 585 chrUn_NT_467774v1 7436 9896 GGXHOI 404 - 7436 9896 0 2 988,1449, 0,1011, -,-, 658676 Satellite W-chromosome 585 chrUn_NT_467774v1 9973 12454 GGXHOI 417 - 9973 12454 0 3 926,412,1087, 0,953,1394, -,-,-, 658677 Satellite W-chromosome 585 chrUn_NT_467775v1 1130 4647 GGERV20_I-int 955 - 1130 4647 0 3 219,2024,950, 0,219,2567, -,-,-, 658680 LTR ERVL 585 chrUn_NT_467777v1 3072 10917 GGXHOI 442 - 3072 10917 0 12 327,697,423,1324,271,153,1297,443,382,535,1048,646, 0,341,1098,1577,2913,3195,3404,4714,5172,5568,6115,7199, -,-,-,-,-,-,-,-,-,-,-,-, 658727 Satellite W-chromosome 585 chrUn_NT_467778v1 1021 1495 GGXHOI 400 + 1021 1495 0 2 354,105, 0,369, +,+, 658731 Satellite W-chromosome 585 chrUn_NT_467778v1 3372 4258 GGXHOI 402 + 3372 4258 0 2 396,449, 0,437, +,+, 658735 Satellite W-chromosome 585 chrUn_NT_467778v1 4383 8875 GGXHOI 408 + 4383 8875 0 5 2035,402,394,563,1024, 0,2055,2471,2885,3468, +,+,+,+,+, 658736 Satellite W-chromosome 585 chrUn_NT_467778v1 9126 11495 GGXHOI 386 + 9126 11495 0 2 415,1911, 0,458, +,+, 658737 Satellite W-chromosome 585 chrUn_NT_467780v1 1490 1791 GGXHOI 378 - 1490 1791 0 2 106,173, 0,128, -,-, 658761 Satellite W-chromosome 585 chrUn_NT_467782v1 8524 9995 (CCCTAA)n 567 + 8524 9995 0 3 796,231,403, 0,837,1068, +,+,+, 658774 Simple_repeat Simple_repeat 585 chrUn_NT_467782v1 10059 10488 (CCCTAA)n 706 + 10059 10488 0 2 187,211, 0,218, +,+, 658776 Simple_repeat Simple_repeat 585 chrUn_NT_467782v1 10577 11445 (CCCTAA)n 511 + 10577 11445 0 4 89,11,178,362, 0,294,317,506, +,+,+,+, 658778 Simple_repeat Simple_repeat 585 chrUn_NT_467784v1 10018 12465 GGXHOI 424 + 10018 12465 0 2 1929,503, 0,1944, +,+, 658801 Satellite W-chromosome 585 chrUn_NT_467786v1 8378 10898 GGLTR7-int 325 + 8378 10898 0 3 97,345,328, 0,1749,2192, +,+,+, 658816 LTR ERV1 585 chrUn_NT_467787v1 1391 1770 (CTCTATGGGG)n 511 - 1391 1770 0 2 243,122, 0,257, -,-, 658822 Satellite Satellite 585 chrUn_NT_467789v1 321 1358 (CAAGG)n 564 + 321 1358 0 3 339,45,295, 0,522,742, +,+,+, 658836 Simple_repeat Simple_repeat 585 chrUn_NT_467789v1 1438 3432 (CAAGG)n 613 + 1438 3432 0 7 164,176,361,157,202,156,232, 0,334,570,931,1227,1429,1762, +,+,+,+,+,+,+, 658839 Simple_repeat Simple_repeat 585 chrUn_NT_467789v1 3475 5098 (CAAGG)n 653 + 3475 5098 0 5 185,178,182,137,392, 0,202,391,1094,1231, +,+,+,+,+, 658844 Simple_repeat Simple_repeat 585 chrUn_NT_467789v1 5280 5624 (CAGGC)n 468 + 5280 5624 0 2 125,41, 0,303, +,+, 658849 Simple_repeat Simple_repeat 585 chrUn_NT_467789v1 5613 6500 (CAAGG)n 637 + 5613 6500 0 4 265,112,124,207, 0,265,556,680, +,+,+,+, 658851 Simple_repeat Simple_repeat 585 chrUn_NT_467789v1 9114 10016 (CCTCG)n 631 + 9114 10016 0 2 640,251, 0,651, +,+, 658862 Simple_repeat Simple_repeat 585 chrUn_NT_467789v1 10009 10989 GGXHOI 453 + 10009 10989 0 2 150,811, 0,169, +,+, 658863 Satellite W-chromosome 585 chrUn_NT_467792v1 259 799 (CAGGC)n 501 + 259 799 0 3 182,128,46, 0,182,494, +,+,+, 658888 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 1332 2471 (CAAGG)n 613 + 1332 2471 0 5 196,131,54,188,340, 0,223,542,596,799, +,+,+,+,+, 658892 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 2903 3542 (CAAGG)n 626 + 2903 3542 0 2 185,437, 0,202, +,+, 658897 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 3553 3952 (CAGGC)n 522 + 3553 3952 0 2 118,106, 0,293, +,+, 658898 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 3877 4854 (CAAGG)n 646 + 3877 4854 0 3 177,361,235, 0,203,742, +,+,+, 658900 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 4974 5907 (CAAGG)n 624 + 4974 5907 0 3 227,91,89, 0,406,844, +,+,+, 658903 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 6004 6633 (CAAGG)n 616 + 6004 6633 0 3 175,180,213, 0,229,416, +,+,+, 658907 Simple_repeat Simple_repeat 585 chrUn_NT_467792v1 8279 9507 GGXHOI 408 + 8279 9507 0 2 491,716, 0,512, +,+, 658914 Satellite W-chromosome 585 chrUn_NT_467792v1 11555 12117 GGXHOI 401 + 11555 12117 0 2 190,329, 0,233, +,+, 658920 Satellite W-chromosome 585 chrUn_NT_467795v1 9515 10135 CR1-H 678 - 9515 10135 0 2 139,475, 0,145, -,-, 658959 LINE CR1 585 chrUn_NT_467799v1 1820 7260 GGXHOI 377 - 1820 7260 0 3 211,1860,3332, 0,232,2108, -,-,-, 658999 Satellite W-chromosome 585 chrUn_NT_467799v1 7285 12336 GGXHOI 375 - 7285 12336 0 4 1136,583,1110,2057, 0,1198,1822,2994, -,-,-,-, 659001 Satellite W-chromosome 585 chrUn_NT_467800v1 2713 4616 GGXHOI 349 + 2713 4616 0 3 207,649,978, 0,252,925, +,+,+, 659004 Satellite W-chromosome 585 chrUn_NT_467800v1 9635 10237 GGXHOI 383 + 9635 10237 0 2 164,381, 0,221, +,+, 659008 Satellite W-chromosome 585 chrUn_NT_467800v1 11396 11826 GGXHOI 300 + 11396 11826 0 2 287,122, 0,308, +,+, 659011 Satellite W-chromosome 585 chrUn_NT_467801v1 813 2746 GGXHOI 374 - 813 2746 0 2 1646,271, 0,1662, -,-, 659016 Satellite W-chromosome 585 chrUn_NT_467801v1 3278 5151 GGXHOI 399 - 3278 5151 0 2 1167,691, 0,1182, -,-, 659019 Satellite W-chromosome 585 chrUn_NT_467801v1 5713 7086 GGXHOI 330 - 5713 7086 0 2 383,969, 0,404, -,-, 659022 Satellite W-chromosome 585 chrUn_NT_467801v1 7238 7546 GGXHOI 313 - 7238 7546 0 2 136,153, 0,155, -,-, 659023 Satellite W-chromosome 585 chrUn_NT_467801v1 8147 9313 GGXHOI 434 - 8147 9313 0 2 161,967, 0,199, -,-, 659026 Satellite W-chromosome 585 chrUn_NT_467801v1 10640 12430 GGXHOI 404 - 10640 12430 0 2 1217,558, 0,1232, -,-, 659030 Satellite W-chromosome 585 chrUn_NT_467802v1 3958 8689 GGXHOI 371 - 3958 8689 0 9 141,223,1427,392,265,575,635,556,327, 0,160,407,1850,2304,2587,3179,3832,4404, -,-,-,-,-,-,-,-,-, 659033 Satellite W-chromosome 585 chrUn_NT_467802v1 8811 10445 GGXHOI 351 - 8811 10445 0 3 1098,229,217, 0,1159,1417, -,-,-, 659034 Satellite W-chromosome 585 chrUn_NT_467802v1 11037 12030 GGXHOI 328 - 11037 12030 0 2 201,750, 0,243, -,-, 659036 Satellite W-chromosome 585 chrUn_NT_467803v1 723 1171 GGXHOI 632 - 723 1171 0 2 33,135, 0,313, -,-, 659040 Satellite W-chromosome 585 chrUn_NT_467803v1 1239 1783 GGXHOI 512 - 1239 1783 0 2 20,188, 0,356, -,-, 659042 Satellite W-chromosome 585 chrUn_NT_467803v1 2878 3949 GGXHOI 556 - 2878 3949 0 2 531,204, 0,867, -,-, 659045 Satellite W-chromosome 585 chrUn_NT_467803v1 4037 5082 GGXHOI 519 - 4037 5082 0 3 534,31,106, 0,877,939, -,-,-, 659047 Satellite W-chromosome 585 chrUn_NT_467803v1 5194 7373 GGXHOI 540 - 5194 7373 0 3 478,824,202, 0,816,1977, -,-,-, 659049 Satellite W-chromosome 585 chrUn_NT_467803v1 7461 8517 GGXHOI 548 - 7461 8517 0 2 537,181, 0,875, -,-, 659052 Satellite W-chromosome 585 chrUn_NT_467803v1 8586 10207 GGXHOI 550 - 8586 10207 0 2 539,742, 0,879, -,-, 659054 Satellite W-chromosome 585 chrUn_NT_467803v1 10274 10839 GGXHOI 528 - 10274 10839 0 2 20,205, 0,360, -,-, 659056 Satellite W-chromosome 585 chrUn_NT_467803v1 10927 11997 GGXHOI 544 - 10927 11997 0 2 528,228, 0,842, -,-, 659058 Satellite W-chromosome 585 chrUn_NT_467805v1 2384 2845 GGXHOI 418 - 2384 2845 0 2 132,311, 0,150, -,-, 659070 Satellite W-chromosome 585 chrUn_NT_467805v1 5687 9205 GGXHOI 381 - 5687 9205 0 3 1556,1187,745, 0,1574,2773, -,-,-, 659073 Satellite W-chromosome 585 chrUn_NT_467806v1 3221 7615 GGLTR7-int 741 - 3221 7615 0 6 113,257,1556,338,202,68, 0,114,372,1937,2275,4326, -,-,-,-,-,-, 659079 LTR ERV1 585 chrUn_NT_467806v1 8425 12429 Z-REP 834 + 8425 12429 0 2 963,3030, 0,974, +,+, 659083 Satellite macro 585 chrUn_NT_467808v1 2802 6622 GGXHOI 346 - 2802 6622 0 6 106,1713,269,179,416,1002, 0,127,1868,2159,2379,2818, -,-,-,-,-,-, 659131 Satellite W-chromosome 585 chrUn_NT_467808v1 6728 7339 GGXHOI 322 - 6728 7339 0 2 398,152, 0,459, -,-, 659132 Satellite W-chromosome 585 chrUn_NT_467808v1 7426 8685 GGXHOI 369 - 7426 8685 0 4 654,291,143,88, 0,673,1008,1171, -,-,-,-, 659133 Satellite W-chromosome 585 chrUn_NT_467808v1 9510 10283 GGXHOI 353 - 9510 10283 0 3 140,298,302, 0,158,471, -,-,-, 659135 Satellite W-chromosome 585 chrUn_NT_467810v1 11472 11731 (ACCCCATAGGG)n 372 + 11472 11731 0 2 121,138, 0,121, +,+, 659163 Satellite Satellite 585 chrUn_NT_467811v1 2526 7838 GGXHOI 412 - 2526 7838 0 6 846,784,1518,618,1150,312, 0,860,1659,3200,3836,5000, -,-,-,-,-,-, 659167 Satellite W-chromosome 585 chrUn_NT_467811v1 7863 8844 GGXHOI 378 - 7863 8844 0 2 605,359, 0,622, -,-, 659169 Satellite W-chromosome 585 chrUn_NT_467813v1 309 1355 GGXHOI 366 - 309 1355 0 2 517,467, 0,579, -,-, 659189 Satellite W-chromosome 585 chrUn_NT_467813v1 6018 7065 GGXHOI 374 - 6018 7065 0 2 512,472, 0,575, -,-, 659195 Satellite W-chromosome 585 chrUn_NT_467813v1 7206 9009 GGXHOI 331 - 7206 9009 0 3 242,1007,469, 0,265,1334, -,-,-, 659196 Satellite W-chromosome 585 chrUn_NT_467813v1 9108 10159 GGXHOI 378 - 9108 10159 0 2 516,472, 0,579, -,-, 659197 Satellite W-chromosome 585 chrUn_NT_467814v1 10436 12405 GGLTR7-int 387 + 10436 12405 0 2 325,338, 0,1631, +,+, 659214 LTR ERV1 585 chrUn_NT_467815v1 1887 6664 GGXHOI 424 - 1887 6664 0 5 746,847,353,1758,922, 0,806,1689,2061,3855, -,-,-,-,-, 659220 Satellite W-chromosome 585 chrUn_NT_467815v1 6743 8425 GGXHOI 423 - 6743 8425 0 2 932,712, 0,970, -,-, 659221 Satellite W-chromosome 585 chrUn_NT_467815v1 8544 10796 GGXHOI 423 - 8544 10796 0 5 576,213,333,702,296, 0,608,845,1215,1956, -,-,-,-,-, 659222 Satellite W-chromosome 585 chrUn_NT_467816v1 803 9850 GGXHOI 425 - 803 9850 0 11 183,647,1204,607,1560,815,852,249,789,1264,592, 0,239,897,2143,2771,4348,5179,6047,6337,7172,8455, -,-,-,-,-,-,-,-,-,-,-, 659226 Satellite W-chromosome 585 chrUn_NT_467816v1 10450 12400 GGXHOI 402 - 10450 12400 0 4 149,275,406,1019, 0,204,509,931, -,-,-,-, 659228 Satellite W-chromosome 585 chrUn_NT_467820v1 1159 4320 GGXHOI 438 - 1159 4320 0 3 478,146,2503, 0,501,658, -,-,-, 659256 Satellite W-chromosome 585 chrUn_NT_467820v1 4313 5212 (CGAGG)n 642 + 4313 5212 0 3 250,133,24, 0,261,875, +,+,+, 659257 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 6934 7315 (CCTTG)n 672 + 6934 7315 0 2 181,200, 0,181, +,+, 659265 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 7249 7705 (GCCTG)n 524 + 7249 7705 0 2 106,170, 0,286, +,+, 659266 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 7607 8400 (CCTTG)n 610 + 7607 8400 0 3 194,88,198, 0,327,595, +,+,+, 659268 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 8980 10227 (CCTTG)n 635 + 8980 10227 0 4 178,592,213,217, 0,194,786,1030, +,+,+,+, 659274 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 10293 11226 (CCTTG)n 611 + 10293 11226 0 3 193,98,410, 0,366,523, +,+,+, 659276 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 11314 11706 (CCTTG)n 593 + 11314 11706 0 2 184,187, 0,205, +,+, 659279 Simple_repeat Simple_repeat 585 chrUn_NT_467820v1 11726 12284 (CCTTG)n 506 + 11726 12284 0 2 256,132, 0,426, +,+, 659281 Simple_repeat Simple_repeat 585 chrUn_NT_467821v1 245 664 (CTCTATGGGG)n 567 + 245 664 0 2 113,248, 0,171, +,+, 659286 Satellite Satellite 585 chrUn_NT_467821v1 2824 3468 (CTCTATGGGG)n 638 + 2824 3468 0 3 70,119,220, 0,189,424, +,+,+, 659293 Satellite Satellite 585 chrUn_NT_467821v1 3489 3838 (CTCTATGGGG)n 548 + 3489 3838 0 2 120,169, 0,180, +,+, 659297 Satellite Satellite 585 chrUn_NT_467821v1 4022 4639 (ACCCATAGGG)n 648 - 4022 4639 0 3 192,164,21, 0,312,596, -,-,-, 659299 Satellite Satellite 585 chrUn_NT_467823v1 3004 3917 GGXHOI 404 + 3004 3917 0 3 292,108,455, 0,307,458, +,+,+, 659325 Satellite W-chromosome 585 chrUn_NT_467823v1 4897 6843 GGXHOI 373 + 4897 6843 0 4 361,110,941,456, 0,377,529,1490, +,+,+,+, 659328 Satellite W-chromosome 585 chrUn_NT_467823v1 6939 7923 GGXHOI 407 + 6939 7923 0 3 361,108,457, 0,376,527, +,+,+, 659329 Satellite W-chromosome 585 chrUn_NT_467823v1 8510 9885 GGXHOI 395 + 8510 9885 0 2 1001,331, 0,1044, +,+, 659331 Satellite W-chromosome 585 chrUn_NT_467823v1 10049 10877 GGXHOI 348 + 10049 10877 0 2 481,304, 0,524, +,+, 659332 Satellite W-chromosome 585 chrUn_NT_467824v1 1718 2140 (CGAGG)n 517 + 1718 2140 0 2 223,184, 0,238, +,+, 659342 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 2141 2749 (AGGCG)n 254 + 2141 2749 0 2 541,15, 0,593, +,+, 659343 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 2781 5832 (CGAGG)n 561 + 2781 5832 0 9 299,68,234,278,30,182,371,187,957, 0,483,557,795,1245,1313,1509,1892,2094, +,+,+,+,+,+,+,+,+, 659345 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 5107 6247 (CAAGG)n 398 + 5107 6247 0 2 738,226, 0,914, +,+, 659348 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 6116 8236 (CGAGG)n 586 + 6116 8236 0 7 186,345,179,114,310,88,31, 0,204,577,816,1283,1822,2089, +,+,+,+,+,+,+, 659350 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 8353 9445 (CGAGG)n 571 + 8353 9445 0 4 257,136,151,184, 0,434,740,908, +,+,+,+, 659355 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 9780 10722 (CGAGG)n 615 + 9780 10722 0 4 230,135,185,178, 0,411,564,764, +,+,+,+, 659361 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 10828 11501 (CGAGG)n 586 + 10828 11501 0 2 258,87, 0,586, +,+, 659364 Simple_repeat Simple_repeat 585 chrUn_NT_467824v1 11590 12386 (CGAGG)n 596 + 11590 12386 0 3 208,144,99, 0,215,697, +,+,+, 659368 Simple_repeat Simple_repeat 585 chrUn_NT_467825v1 9460 10081 CR1-H 674 - 9460 10081 0 2 137,478, 0,143, -,-, 659380 LINE CR1 585 chrUn_NT_467826v1 2959 3862 GGXHOI 397 - 2959 3862 0 3 467,229,148, 0,483,755, -,-,-, 659385 Satellite W-chromosome 585 chrUn_NT_467826v1 3933 5701 GGXHOI 370 - 3933 5701 0 2 509,1240, 0,528, -,-, 659386 Satellite W-chromosome 585 chrUn_NT_467826v1 5985 8094 GGXHOI 409 - 5985 8094 0 3 1333,396,341, 0,1355,1768, -,-,-, 659387 Satellite W-chromosome 585 chrUn_NT_467826v1 9074 11096 GGXHOI 412 - 9074 11096 0 2 147,1855, 0,167, -,-, 659390 Satellite W-chromosome 585 chrUn_NT_467828v1 333 2801 GGLTR7-int 268 - 333 2801 0 5 98,350,60,311,236, 0,284,1016,1146,2232, -,-,-,-,-, 659401 LTR ERV1 585 chrUn_NT_467828v1 11301 11595 CR1-X1 222 - 11301 11595 0 2 58,223, 0,71, -,-, 659408 LINE CR1 585 chrUn_NT_467829v1 1933 2984 GGXHOI 392 + 1933 2984 0 2 472,516, 0,535, +,+, 659411 Satellite W-chromosome 585 chrUn_NT_467829v1 3083 4134 GGXHOI 392 + 3083 4134 0 2 472,516, 0,535, +,+, 659412 Satellite W-chromosome 585 chrUn_NT_467829v1 4233 5282 GGXHOI 391 + 4233 5282 0 2 472,514, 0,535, +,+, 659413 Satellite W-chromosome 585 chrUn_NT_467829v1 7094 10201 GGXHOI 374 + 7094 10201 0 2 1041,2005, 0,1102, +,+, 659417 Satellite W-chromosome 585 chrUn_NT_467830v1 10946 12341 GGLTR7-int 332 - 10946 12341 0 3 281,210,101, 0,1057,1294, -,-,-, 659433 LTR ERV1 585 chrUn_NT_467831v1 1522 12169 GGXHOI 382 + 1522 12169 0 7 189,822,6367,837,907,833,500, 0,204,1088,7471,8370,9293,10147, +,+,+,+,+,+,+, 659435 Satellite W-chromosome 585 chrUn_NT_467832v1 8924 12331 GGXHOI 354 - 8924 12331 0 4 406,130,465,2341, 0,428,570,1066, -,-,-,-, 659438 Satellite W-chromosome 585 chrUn_NT_467834v1 8676 9297 GGERVK10-int 320 + 8676 9297 0 3 94,141,71, 0,259,550, +,+,+, 659454 LTR ERVK 585 chrUn_NT_467835v1 4307 5718 GGXHOI 393 + 4307 5718 0 2 1041,353, 0,1058, +,+, 659460 Satellite W-chromosome 585 chrUn_NT_467835v1 5817 6871 GGXHOI 376 + 5817 6871 0 2 429,601, 0,453, +,+, 659461 Satellite W-chromosome 585 chrUn_NT_467835v1 9559 9869 GGXHOI 355 + 9559 9869 0 2 149,144, 0,166, +,+, 659465 Satellite W-chromosome 585 chrUn_NT_467836v1 4529 8193 GGXHOI 540 + 4529 8193 0 6 496,373,296,18,162,1081, 0,719,1386,2069,2099,2583, +,+,+,+,+,+, 659480 Satellite W-chromosome 585 chrUn_NT_467836v1 9269 12108 GGXHOI 551 + 9269 12108 0 6 212,182,925,266,255,22, 0,432,626,1563,2133,2817, +,+,+,+,+,+, 659487 Satellite W-chromosome 585 chrUn_NT_467837v1 8883 9340 CR1-H 677 + 8883 9340 0 2 296,161, 0,296, +,+, 659498 LINE CR1 585 chrUn_NT_467838v1 1702 2315 G-rich 470 + 1702 2315 0 2 37,529, 0,84, +,+, 659505 Low_complexity Low_complexity 585 chrUn_NT_467841v1 1473 2226 GGXHOI 373 + 1473 2226 0 2 183,508, 0,245, +,+, 659533 Satellite W-chromosome 585 chrUn_NT_467841v1 2325 3766 GGXHOI 364 + 2325 3766 0 2 467,914, 0,527, +,+, 659534 Satellite W-chromosome 585 chrUn_NT_467841v1 4941 6457 GGXHOI 351 + 4941 6457 0 3 1040,169,194, 0,1097,1322, +,+,+, 659537 Satellite W-chromosome 585 chrUn_NT_467842v1 3320 3826 (CGAGG)n 530 + 3320 3826 0 2 181,153, 0,353, +,+, 659561 Simple_repeat Simple_repeat 585 chrUn_NT_467842v1 5050 5616 (CGAGG)n 573 + 5050 5616 0 2 336,230, 0,336, +,+, 659568 Simple_repeat Simple_repeat 585 chrUn_NT_467842v1 5913 6570 (CGAGG)n 505 + 5913 6570 0 3 220,29,207, 0,404,450, +,+,+, 659571 Simple_repeat Simple_repeat 585 chrUn_NT_467842v1 6649 7662 (CGAGG)n 542 + 6649 7662 0 2 566,264, 0,749, +,+, 659574 Simple_repeat Simple_repeat 585 chrUn_NT_467842v1 8071 9190 (CCTCG)n 574 + 8071 9190 0 4 132,17,133,130, 0,492,702,989, +,+,+,+, 659577 Simple_repeat Simple_repeat 585 chrUn_NT_467842v1 10392 11647 (CCTCG)n 552 + 10392 11647 0 2 562,515, 0,740, +,+, 659585 Simple_repeat Simple_repeat 585 chrUn_NT_467842v1 11726 12336 (CCTCG)n 526 + 11726 12336 0 2 387,38, 0,572, +,+, 659588 Simple_repeat Simple_repeat 585 chrUn_NT_467843v1 1219 2463 GGXHOI 431 + 1219 2463 0 2 909,284, 0,960, +,+, 659591 Satellite W-chromosome 585 chrUn_NT_467843v1 2571 8792 GGXHOI 533 + 2571 8792 0 6 2162,416,149,2333,69,705, 0,2195,2670,2830,5174,5516, +,+,+,+,+,+, 659592 Satellite W-chromosome 585 chrUn_NT_467844v1 5745 6323 G-rich 518 + 5745 6323 0 2 29,494, 0,84, +,+, 659603 Low_complexity Low_complexity 585 chrUn_NT_467845v1 1168 1796 CR1-C 693 - 1168 1796 0 2 64,564, 0,64, -,-, 659611 LINE CR1 585 chrUn_NT_467845v1 4785 8361 CR1-H 635 + 4785 8361 0 4 1156,111,460,140, 0,1156,2957,3436, +,+,+,+, 659615 LINE CR1 585 chrUn_NT_467846v1 6019 6461 GGXHOI 373 + 6019 6461 0 2 180,249, 0,193, +,+, 659622 Satellite W-chromosome 585 chrUn_NT_467846v1 6641 7244 GGXHOI 402 + 6641 7244 0 3 257,150,157, 0,273,446, +,+,+, 659623 Satellite W-chromosome 585 chrUn_NT_467846v1 7376 8470 GGXHOI 377 + 7376 8470 0 2 524,550, 0,544, +,+, 659624 Satellite W-chromosome 585 chrUn_NT_467846v1 8746 12351 GGXHOI 367 + 8746 12351 0 9 973,349,173,385,405,237,126,407,268, 0,1015,1384,1578,2026,2448,2746,2910,3337, +,+,+,+,+,+,+,+,+, 659625 Satellite W-chromosome 585 chrUn_NT_467847v1 1304 2230 GGXHOI 332 - 1304 2230 0 3 131,489,271, 0,155,655, -,-,-, 659628 Satellite W-chromosome 585 chrUn_NT_467847v1 2329 2920 GGXHOI 377 - 2329 2920 0 2 127,412, 0,179, -,-, 659629 Satellite W-chromosome 585 chrUn_NT_467847v1 3579 4366 GGXHOI 406 - 3579 4366 0 2 396,377, 0,410, -,-, 659631 Satellite W-chromosome 585 chrUn_NT_467847v1 6298 8034 GGXHOI 324 - 6298 8034 0 3 130,144,1428, 0,150,308, -,-,-, 659635 Satellite W-chromosome 585 chrUn_NT_467847v1 8233 9501 GGXHOI 385 - 8233 9501 0 2 808,403, 0,865, -,-, 659636 Satellite W-chromosome 585 chrUn_NT_467847v1 10055 10908 GGXHOI 378 - 10055 10908 0 2 465,369, 0,484, -,-, 659638 Satellite W-chromosome 585 chrUn_NT_467848v1 4763 6882 GGXHOI 388 - 4763 6882 0 2 1008,1048, 0,1071, -,-, 659647 Satellite W-chromosome 585 chrUn_NT_467848v1 7169 8129 GGXHOI 383 - 7169 8129 0 2 512,385, 0,575, -,-, 659648 Satellite W-chromosome 585 chrUn_NT_467850v1 1172 3368 GGXHOI 369 + 1172 3368 0 2 1046,1087, 0,1109, +,+, 659657 Satellite W-chromosome 585 chrUn_NT_467850v1 3470 4450 GGXHOI 346 + 3470 4450 0 2 339,606, 0,374, +,+, 659658 Satellite W-chromosome 585 chrUn_NT_467850v1 4551 7318 GGXHOI 387 + 4551 7318 0 3 1045,1084,516, 0,1104,2251, +,+,+, 659659 Satellite W-chromosome 585 chrUn_NT_467850v1 11507 12112 GGXHOI 383 + 11507 12112 0 2 303,266, 0,339, +,+, 659666 Satellite W-chromosome 585 chrUn_NT_467851v1 3554 5976 GGXHOI 534 - 3554 5976 0 3 548,297,509, 0,851,1913, -,-,-, 659673 Satellite W-chromosome 585 chrUn_NT_467851v1 6696 8883 GGXHOI 495 - 6696 8883 0 4 18,827,211,549, 0,305,1414,1638, -,-,-,-, 659679 Satellite W-chromosome 585 chrUn_NT_467851v1 8963 10647 GGXHOI 459 - 8963 10647 0 5 609,152,138,19,168, 0,765,956,1138,1516, -,-,-,-,-, 659682 Satellite W-chromosome 585 chrUn_NT_467851v1 10716 12336 GGXHOI 466 - 10716 12336 0 4 287,465,243,62, 0,332,1094,1558, -,-,-,-, 659685 Satellite W-chromosome 585 chrUn_NT_467854v1 6544 6635 (TCTTTT)n 114 + 6544 6635 0 2 20,51, 0,40, +,+, 659720 Simple_repeat Simple_repeat 585 chrUn_NT_467855v1 6010 7305 (TTAGGG)n 636 + 6010 7305 0 5 257,55,391,35,165, 0,431,501,918,1130, +,+,+,+,+, 659743 Simple_repeat Simple_repeat 585 chrUn_NT_467855v1 7323 9336 (TTAGGG)n 588 + 7323 9336 0 6 468,214,30,213,365,458, 0,495,893,947,1178,1555, +,+,+,+,+,+, 659747 Simple_repeat Simple_repeat 585 chrUn_NT_467855v1 9335 9955 (CCCTAA)n 748 + 9335 9955 0 2 306,137, 0,483, +,+, 659749 Simple_repeat Simple_repeat 585 chrUn_NT_467855v1 10000 10585 (CCCTAA)n 630 + 10000 10585 0 2 172,389, 0,196, +,+, 659752 Simple_repeat Simple_repeat 585 chrUn_NT_467855v1 10597 11812 (CCCTAA)n 659 + 10597 11812 0 2 513,685, 0,530, +,+, 659754 Simple_repeat Simple_repeat 585 chrUn_NT_467856v1 1175 9825 GGXHOI 574 + 1175 9825 0 8 696,640,641,520,393,634,1104,1039, 0,1017,1978,3059,4146,4861,6065,7611, +,+,+,+,+,+,+,+, 659762 Satellite W-chromosome 585 chrUn_NT_467856v1 11681 12332 GGXHOI 568 + 11681 12332 0 2 197,49, 0,602, +,+, 659765 Satellite W-chromosome 585 chrUn_NT_467857v1 5764 6881 CR1-B2 682 + 5764 6881 0 2 225,889, 0,228, +,+, 659769 LINE CR1 585 chrUn_NT_467857v1 11757 12306 CR1-F 854 + 11757 12306 0 2 146,350, 0,199, +,+, 659780 LINE CR1 585 chrUn_NT_467859v1 864 4498 GGXHOI 344 - 864 4498 0 3 941,1412,1193, 0,987,2441, -,-,-, 659796 Satellite W-chromosome 585 chrUn_NT_467859v1 5034 6118 GGXHOI 363 - 5034 6118 0 2 747,320, 0,764, -,-, 659798 Satellite W-chromosome 585 chrUn_NT_467860v1 10251 10767 GGLTR3F2 578 + 10251 10767 0 2 240,219, 0,297, +,+, 659814 LTR ERVL 585 chrUn_NT_467861v1 10261 10506 (CTCTATGGGG)n 608 + 10261 10506 0 2 81,39, 0,206, +,+, 659824 Satellite Satellite 585 chrUn_NT_467861v1 10611 10905 (CTCTATGGGG)n 633 + 10611 10905 0 2 119,120, 0,174, +,+, 659826 Satellite Satellite 585 chrUn_NT_467861v1 11001 11651 (CTCTATGGGG)n 631 + 11001 11651 0 4 120,121,116,248, 0,142,275,402, +,+,+,+, 659827 Satellite Satellite 585 chrUn_NT_467862v1 718 3250 GGERVL-B-int 708 + 718 3250 0 4 297,64,1067,744, 0,657,721,1788, +,+,+,+, 659833 LTR ERVL 585 chrUn_NT_467862v1 3252 4612 GGLTR7-int 344 + 3252 4612 0 3 59,283,283, 0,85,1077, +,+,+, 659834 LTR ERV1 585 chrUn_NT_467864v1 986 6779 GGXHOI 421 - 986 6779 0 9 168,1047,436,817,139,415,851,1165,589, 0,181,1252,1703,2549,2704,3159,4024,5204, -,-,-,-,-,-,-,-,-, 659851 Satellite W-chromosome 585 chrUn_NT_467864v1 6964 9063 GGXHOI 402 - 6964 9063 0 4 323,151,1382,158, 0,358,524,1941, -,-,-,-, 659852 Satellite W-chromosome 585 chrUn_NT_467864v1 9176 11978 GGXHOI 366 - 9176 11978 0 7 215,259,142,269,260,787,682, 0,259,552,709,989,1287,2120, -,-,-,-,-,-,-, 659853 Satellite W-chromosome 585 chrUn_NT_467866v1 5971 6427 CR1-H 672 + 5971 6427 0 2 296,160, 0,296, +,+, 659862 LINE CR1 585 chrUn_NT_467866v1 8586 9212 CR1-H 686 + 8586 9212 0 2 468,139, 0,487, +,+, 659865 LINE CR1 585 chrUn_NT_467868v1 1347 12302 GGXHOI 409 - 1347 12302 0 4 4575,3049,1010,2231, 0,4609,7676,8724, -,-,-,-, 659877 Satellite W-chromosome 585 chrUn_NT_467869v1 7281 8569 (ATATAAT)n 476 + 7281 8569 0 2 1093,150, 0,1138, +,+, 659886 Simple_repeat Simple_repeat 585 chrUn_NT_467872v1 2533 3636 (ACCCATAGGG)n 634 + 2533 3636 0 6 120,20,222,20,138,134, 0,239,284,754,796,969, +,+,+,+,+,+, 659916 Satellite Satellite 585 chrUn_NT_467872v1 11481 11731 (ACCCCATAGGG)n 510 - 11481 11731 0 2 64,61, 0,189, -,-, 659923 Satellite Satellite 585 chrUn_NT_467873v1 8516 10626 GGXHOI 390 - 8516 10626 0 2 1001,1046, 0,1064, -,-, 659934 Satellite W-chromosome 585 chrUn_NT_467874v1 284 9545 CR1-F 528 + 284 9545 0 25 199,200,203,203,204,155,200,177,152,200,203,155,196,199,203,203,204,155,201,180,155,194,196,171,184, 0,476,978,1223,1468,1939,2384,2849,3065,3503,3745,4214,4659,5130,5626,5871,6116,6586,7033,7500,7724,8168,8404,8641,9077, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 659938 LINE CR1 585 chrUn_NT_467874v1 9585 12127 CR1-F 515 + 9585 12127 0 7 200,199,201,199,154,200,171, 0,498,741,984,1452,1895,2371, +,+,+,+,+,+,+, 659954 LINE CR1 585 chrUn_NT_467878v1 5732 7546 GGXHOI 369 - 5732 7546 0 4 305,422,398,611, 0,347,780,1203, -,-,-,-, 659988 Satellite W-chromosome 585 chrUn_NT_467878v1 7628 12275 GGXHOI 394 - 7628 12275 0 6 900,640,163,1281,1275,270, 0,920,1583,1771,3077,4377, -,-,-,-,-,-, 659989 Satellite W-chromosome 585 chrUn_NT_467879v1 1120 11444 GGXHOI 431 + 1120 11444 0 11 258,567,345,2892,641,854,1852,444,306,745,1203, 0,291,875,1236,4145,4797,5666,7580,8040,8359,9121, +,+,+,+,+,+,+,+,+,+,+, 659992 Satellite W-chromosome 585 chrUn_NT_467880v1 2035 4657 GGXHOI 393 - 2035 4657 0 6 293,393,955,187,356,342, 0,312,725,1699,1901,2280, -,-,-,-,-,-, 659995 Satellite W-chromosome 585 chrUn_NT_467880v1 4748 12267 GGXHOI 390 - 4748 12267 0 12 719,437,602,351,1538,844,145,677,348,478,684,487, 0,734,1185,1802,2173,3731,4616,4777,5469,5841,6333,7032, -,-,-,-,-,-,-,-,-,-,-,-, 659996 Satellite W-chromosome 585 chrUn_NT_467881v1 956 2657 GGERVL-A-int 720 - 956 2657 0 2 1243,458, 0,1243, -,-, 660000 LTR ERVL 585 chrUn_NT_467884v1 6595 6726 GA-rich 340 + 6595 6726 0 2 42,33, 0,98, +,+, 660031 Low_complexity Low_complexity 585 chrUn_NT_467885v1 895 1976 GGXHOI 560 - 895 1976 0 2 537,205, 0,876, -,-, 660049 Satellite W-chromosome 585 chrUn_NT_467885v1 2064 3161 GGXHOI 544 - 2064 3161 0 2 539,218, 0,879, -,-, 660051 Satellite W-chromosome 585 chrUn_NT_467885v1 3230 4257 GGXHOI 500 - 3230 4257 0 2 593,389, 0,638, -,-, 660053 Satellite W-chromosome 585 chrUn_NT_467885v1 4337 5471 GGXHOI 504 - 4337 5471 0 2 554,326, 0,808, -,-, 660054 Satellite W-chromosome 585 chrUn_NT_467885v1 6788 8972 GGXHOI 531 - 6788 8972 0 3 530,733,566, 0,841,1618, -,-,-, 660057 Satellite W-chromosome 585 chrUn_NT_467885v1 9060 10109 GGXHOI 579 - 9060 10109 0 3 422,66,265, 0,466,784, -,-,-, 660059 Satellite W-chromosome 585 chrUn_NT_467885v1 11177 12263 GGXHOI 548 - 11177 12263 0 3 12,105,215, 0,438,871, -,-,-, 660062 Satellite W-chromosome 585 chrUn_NT_467887v1 573 940 (CAGGC)n 514 + 573 940 0 2 105,85, 0,282, +,+, 660071 Simple_repeat Simple_repeat 585 chrUn_NT_467887v1 2571 3266 (CCTCG)n 558 + 2571 3266 0 2 235,429, 0,266, +,+, 660079 Simple_repeat Simple_repeat 585 chrUn_NT_467887v1 6274 7230 GGXHOI 338 + 6274 7230 0 2 230,709, 0,247, +,+, 660083 Satellite W-chromosome 585 chrUn_NT_467887v1 8846 12036 GGXHOI 375 + 8846 12036 0 4 412,306,2239,135, 0,432,759,3055, +,+,+,+, 660085 Satellite W-chromosome 585 chrUn_NT_467888v1 924 4406 GGXHOI 360 - 924 4406 0 5 1152,83,1159,34,306, 0,1170,1284,2498,3176, -,-,-,-,-, 660090 Satellite W-chromosome 585 chrUn_NT_467888v1 5328 6114 GGXHOI 365 - 5328 6114 0 2 271,492, 0,294, -,-, 660095 Satellite W-chromosome 585 chrUn_NT_467888v1 6146 6754 GGXHOI 427 - 6146 6754 0 2 392,204, 0,404, -,-, 660097 Satellite W-chromosome 585 chrUn_NT_467888v1 6841 7555 GGXHOI 321 - 6841 7555 0 2 558,142, 0,572, -,-, 660098 Satellite W-chromosome 585 chrUn_NT_467888v1 8082 10614 GGXHOI 405 - 8082 10614 0 3 1415,445,621, 0,1437,1911, -,-,-, 660101 Satellite W-chromosome 585 chrUn_NT_467890v1 2224 2317 CR1-E 632 + 2224 2317 0 2 49,44, 0,49, +,+, 660115 LINE CR1 585 chrUn_NT_467891v1 7770 12261 GGXHOI 354 - 7770 12261 0 5 69,837,1858,125,1491, 0,92,947,2863,3000, -,-,-,-,-, 660133 Satellite W-chromosome 585 chrUn_NT_467893v1 6756 7843 (CCTTG)n 582 + 6756 7843 0 3 157,200,338, 0,516,749, +,+,+, 660151 Simple_repeat Simple_repeat 585 chrUn_NT_467893v1 10113 11248 CR1-F2 869 + 10113 11248 0 2 663,472, 0,663, +,+, 660162 LINE CR1 585 chrUn_NT_467894v1 2128 3624 GGLTR7B 586 - 2128 3624 0 2 114,889, 0,607, -,-, 660169 LTR ERV1 585 chrUn_NT_467895v1 3209 3622 CR1-H 722 + 3209 3622 0 2 104,309, 0,104, +,+, 660189 LINE CR1 585 chrUn_NT_467896v1 2306 4927 GGXHOI 307 - 2306 4927 0 3 1023,1343,197, 0,1044,2424, -,-,-, 660197 Satellite W-chromosome 585 chrUn_NT_467896v1 5131 7018 GGXHOI 370 - 5131 7018 0 2 479,1392, 0,495, -,-, 660198 Satellite W-chromosome 585 chrUn_NT_467896v1 7231 12231 GGXHOI 396 - 7231 12231 0 4 2293,652,1064,904, 0,2305,3020,4096, -,-,-,-, 660199 Satellite W-chromosome 585 chrUn_NT_467898v1 3703 4752 GGLTR7A 775 - 3703 4752 0 2 586,462, 0,587, -,-, 660211 LTR ERV1 585 chrUn_NT_467898v1 5279 5705 GGLTR7A 882 - 5279 5705 0 2 252,174, 0,252, -,-, 660213 LTR ERV1 585 chrUn_NT_467898v1 6271 7043 (CAGGC)n 541 + 6271 7043 0 3 128,47,387, 0,312,385, +,+,+, 660218 Simple_repeat Simple_repeat 585 chrUn_NT_467898v1 7508 7977 (CAAGG)n 531 + 7508 7977 0 2 210,259, 0,210, +,+, 660222 Simple_repeat Simple_repeat 585 chrUn_NT_467898v1 8035 8822 (CAAGG)n 528 + 8035 8822 0 2 423,337, 0,450, +,+, 660224 Simple_repeat Simple_repeat 585 chrUn_NT_467898v1 9212 9748 (CAGGC)n 523 + 9212 9748 0 3 94,212,230, 0,94,306, +,+,+, 660230 Simple_repeat Simple_repeat 585 chrUn_NT_467898v1 9975 10359 (CAGGC)n 478 + 9975 10359 0 2 189,195, 0,189, +,+, 660234 Simple_repeat Simple_repeat 585 chrUn_NT_467898v1 10358 10812 (CAAGG)n 592 + 10358 10812 0 2 167,103, 0,351, +,+, 660235 Simple_repeat Simple_repeat 585 chrUn_NT_467900v1 7006 7723 (GAGTG)n 272 + 7006 7723 0 3 27,343,214, 0,110,503, +,+,+, 660273 Simple_repeat Simple_repeat 585 chrUn_NT_467901v1 1570 2690 GGXHOI 356 - 1570 2690 0 2 348,756, 0,364, -,-, 660291 Satellite W-chromosome 585 chrUn_NT_467901v1 2794 3969 GGXHOI 345 - 2794 3969 0 2 347,771, 0,404, -,-, 660292 Satellite W-chromosome 585 chrUn_NT_467901v1 6228 7725 GGXHOI 328 - 6228 7725 0 2 290,1144, 0,353, -,-, 660297 Satellite W-chromosome 585 chrUn_NT_467901v1 10187 12147 GGXHOI 339 - 10187 12147 0 3 331,921,587, 0,394,1373, -,-,-, 660303 Satellite W-chromosome 585 chrUn_NT_467903v1 3213 6318 GGERV10_LTR 876 + 3213 6318 0 2 2887,218, 0,2887, +,+, 660306 LTR ERVL 585 chrUn_NT_467904v1 2590 8268 GGERV10_LTR 789 - 2590 8268 0 6 158,62,292,4742,150,75, 0,265,327,619,5361,5603, -,-,-,-,-,-, 660311 LTR ERVL 585 chrUn_NT_467904v1 8255 10012 GGERVL-B-int 566 - 8255 10012 0 2 1200,555, 0,1202, -,-, 660312 LTR ERVL 585 chrUn_NT_467905v1 622 1630 GGXHOI 355 + 622 1630 0 2 660,314, 0,694, +,+, 660314 Satellite W-chromosome 585 chrUn_NT_467905v1 1728 2947 GGXHOI 339 + 1728 2947 0 2 493,703, 0,516, +,+, 660315 Satellite W-chromosome 585 chrUn_NT_467905v1 3027 5737 GGXHOI 391 + 3027 5737 0 4 93,878,484,1120, 0,141,1081,1590, +,+,+,+, 660316 Satellite W-chromosome 585 chrUn_NT_467905v1 5831 11002 GGXHOI 372 + 5831 11002 0 3 474,1758,2893, 0,498,2278, +,+,+, 660317 Satellite W-chromosome 585 chrUn_NT_467906v1 6491 11179 ENS1-LTR 924 - 6491 11179 0 3 930,2822,936, 0,930,3752, -,-,-, 660321 LTR ERVL 585 chrUn_NT_467906v1 11198 12232 GGXHOI 342 + 11198 12232 0 2 859,127, 0,907, +,+, 660322 Satellite W-chromosome 585 chrUn_NT_467907v1 4635 6654 GGLTR7-int 683 - 4635 6654 0 3 33,74,1282, 0,34,737, -,-,-, 660326 LTR ERV1 585 chrUn_NT_467911v1 699 1118 GGLTR7A 860 + 699 1118 0 2 173,246, 0,173, +,+, 660362 LTR ERV1 585 chrUn_NT_467911v1 1640 2689 GGLTR7A 778 + 1640 2689 0 2 462,586, 0,463, +,+, 660364 LTR ERV1 585 chrUn_NT_467911v1 5182 8131 GGERVL-B-int 775 + 5182 8131 0 3 312,53,2212, 0,683,737, +,+,+, 660368 LTR ERVL 585 chrUn_NT_467911v1 8214 8434 (CTCTATGGGG)n 448 - 8214 8434 0 2 82,26, 0,194, -,-, 660369 Satellite Satellite 585 chrUn_NT_467911v1 8868 10261 GGLTR7-int 319 + 8868 10261 0 3 99,259,278, 0,101,1115, +,+,+, 660371 LTR ERV1 585 chrUn_NT_467912v1 3687 4521 GGXHOI 349 + 3687 4521 0 3 331,203,257, 0,351,577, +,+,+, 660373 Satellite W-chromosome 585 chrUn_NT_467912v1 5342 9587 GGXHOI 383 + 5342 9587 0 3 231,3382,514, 0,287,3731, +,+,+, 660376 Satellite W-chromosome 585 chrUn_NT_467913v1 5824 5917 CR1-E 632 + 5824 5917 0 2 49,44, 0,49, +,+, 660389 LINE CR1 585 chrUn_NT_467914v1 671 1660 GGXHOI 403 + 671 1660 0 3 158,471,306, 0,195,683, +,+,+, 660402 Satellite W-chromosome 585 chrUn_NT_467914v1 1724 4048 GGXHOI 414 + 1724 4048 0 2 952,1356, 0,968, +,+, 660403 Satellite W-chromosome 585 chrUn_NT_467914v1 8977 10670 GGXHOI 352 + 8977 10670 0 4 223,166,499,707, 0,275,459,986, +,+,+,+, 660406 Satellite W-chromosome 585 chrUn_NT_467915v1 608 5636 GGXHOI 392 - 608 5636 0 4 620,2340,1398,530, 0,656,3052,4498, -,-,-,-, 660409 Satellite W-chromosome 585 chrUn_NT_467915v1 7634 10251 GGXHOI 363 - 7634 10251 0 2 2158,434, 0,2183, -,-, 660416 Satellite W-chromosome 585 chrUn_NT_467915v1 10285 12040 GGXHOI 315 - 10285 12040 0 2 658,1075, 0,680, -,-, 660418 Satellite W-chromosome 585 chrUn_NT_467916v1 7607 9340 GGXHOI 554 - 7607 9340 0 2 724,759, 0,974, -,-, 660429 Satellite W-chromosome 585 chrUn_NT_467916v1 9353 12210 GGXHOI 558 - 9353 12210 0 2 379,235, 0,2622, -,-, 660431 Satellite W-chromosome 585 chrUn_NT_467917v1 7521 8145 CR1-H 672 - 7521 8145 0 2 139,479, 0,145, -,-, 660438 LINE CR1 585 chrUn_NT_467917v1 10612 11859 CR1-H 687 - 10612 11859 0 3 115,892,179, 0,115,1068, -,-,-, 660443 LINE CR1 585 chrUn_NT_467920v1 1160 5273 GGXHOI 391 + 1160 5273 0 2 2362,1735, 0,2378, +,+, 660459 Satellite W-chromosome 585 chrUn_NT_467920v1 5363 8734 GGXHOI 330 + 5363 8734 0 6 747,324,720,1160,115,192, 0,760,1100,1871,3052,3179, +,+,+,+,+,+, 660460 Satellite W-chromosome 585 chrUn_NT_467920v1 8831 11871 GGXHOI 296 + 8831 11871 0 6 594,154,256,153,793,932, 0,642,828,1100,1297,2108, +,+,+,+,+,+, 660461 Satellite W-chromosome 585 chrUn_NT_467922v1 3104 6600 GGERV20_I-int 937 - 3104 6600 0 3 211,2010,944, 0,211,2552, -,-,-, 660470 LTR ERVL 585 chrUn_NT_467922v1 10466 11534 GGXHOI 477 + 10466 11534 0 2 204,811, 0,257, +,+, 660473 Satellite W-chromosome 585 chrUn_NT_467923v1 1186 7690 GGXHOI 553 - 1186 7690 0 6 1064,603,14,2352,14,1649, 0,1101,1902,2293,4827,4855, -,-,-,-,-,-, 660477 Satellite W-chromosome 585 chrUn_NT_467923v1 7596 7901 Sat-CR1_GG 116 - 7596 7901 0 2 133,11, 0,294, -,-, 660481 Satellite Satellite 585 chrUn_NT_467923v1 7902 12195 GGXHOI 564 - 7902 12195 0 7 868,183,12,708,13,490,40, 0,1417,1919,2183,3274,3301,4253, -,-,-,-,-,-,-, 660483 Satellite W-chromosome 585 chrUn_NT_467924v1 12025 12180 (GCCTT)n 364 + 12025 12180 0 2 65,36, 0,119, +,+, 660491 Simple_repeat Simple_repeat 585 chrUn_NT_467925v1 2469 8783 GGXHOI 382 - 2469 8783 0 10 271,227,484,412,227,2329,886,226,555,514, 0,293,532,1049,1477,1727,4073,4982,5229,5800, -,-,-,-,-,-,-,-,-,-, 660496 Satellite W-chromosome 585 chrUn_NT_467925v1 10152 12183 GGXHOI 344 - 10152 12183 0 4 576,132,476,764, 0,625,775,1267, -,-,-,-, 660500 Satellite W-chromosome 585 chrUn_NT_467930v1 9613 12179 GGXHOI 574 - 9613 12179 0 3 361,212,23, 0,736,2543, -,-,-, 660559 Satellite W-chromosome 585 chrUn_NT_467933v1 2867 3971 GGXHOI 478 + 2867 3971 0 2 277,497, 0,607, +,+, 660578 Satellite W-chromosome 585 chrUn_NT_467933v1 5256 6354 GGXHOI 453 + 5256 6354 0 3 278,392,197, 0,475,901, +,+,+, 660581 Satellite W-chromosome 585 chrUn_NT_467933v1 6429 7516 GGXHOI 512 + 6429 7516 0 2 764,17, 0,1070, +,+, 660583 Satellite W-chromosome 585 chrUn_NT_467933v1 7593 9902 GGXHOI 523 + 7593 9902 0 6 210,177,245,17,231,22, 0,650,1121,1706,1757,2287, +,+,+,+,+,+, 660585 Satellite W-chromosome 585 chrUn_NT_467933v1 9970 11054 GGXHOI 509 + 9970 11054 0 3 111,443,497, 0,133,587, +,+,+, 660590 Satellite W-chromosome 585 chrUn_NT_467933v1 11118 12179 GGXHOI 550 + 11118 12179 0 3 217,196,19, 0,534,1042, +,+,+, 660591 Satellite W-chromosome 585 chrUn_NT_467934v1 1077 3912 GGXHOI 380 + 1077 3912 0 3 1191,353,1177, 0,1250,1658, +,+,+, 660595 Satellite W-chromosome 585 chrUn_NT_467934v1 4163 5323 GGXHOI 337 + 4163 5323 0 2 593,518, 0,642, +,+, 660596 Satellite W-chromosome 585 chrUn_NT_467936v1 5228 8760 GGLTR7-int 750 + 5228 8760 0 5 1327,330,1485,263,116, 0,1327,1666,3152,3416, +,+,+,+,+, 660621 LTR ERV1 585 chrUn_NT_467939v1 836 5261 GGXHOI 548 - 836 5261 0 2 2055,2122, 0,2303, -,-, 660656 Satellite W-chromosome 585 chrUn_NT_467939v1 5304 10684 GGXHOI 552 - 5304 10684 0 9 831,241,428,24,55,208,58,46,779, 0,854,1586,2369,2670,3188,3894,4530,4601, -,-,-,-,-,-,-,-,-, 660658 Satellite W-chromosome 585 chrUn_NT_467940v1 2910 6860 CR1-H 607 + 2910 6860 0 4 1148,111,478,133, 0,1148,3339,3817, +,+,+,+, 660672 LINE CR1 585 chrUn_NT_467941v1 5250 7041 CR1-F 413 + 5250 7041 0 2 208,1089, 0,702, +,+, 660682 LINE CR1 585 chrUn_NT_467941v1 10609 12135 CR1-F 505 + 10609 12135 0 2 362,711, 0,815, +,+, 660688 LINE CR1 585 chrUn_NT_467942v1 4235 5028 GGXHOI 463 - 4235 5028 0 3 305,135,313, 0,333,480, -,-,-, 660695 Satellite W-chromosome 585 chrUn_NT_467942v1 9451 11279 GGXHOI 472 - 9451 11279 0 2 330,1448, 0,380, -,-, 660702 Satellite W-chromosome 585 chrUn_NT_467943v1 1531 9077 GGXHOI 554 + 1531 9077 0 13 128,192,799,300,111,197,194,225,110,197,149,300,276, 0,357,871,1993,2771,3205,3815,4332,5109,5542,6187,6659,7270, +,+,+,+,+,+,+,+,+,+,+,+,+, 660707 Satellite W-chromosome 585 chrUn_NT_467946v1 11920 12160 CR1-C 710 - 11920 12160 0 2 75,90, 0,150, -,-, 660751 LINE CR1 585 chrUn_NT_467947v1 3693 3788 (TCCCACC)n 306 + 3693 3788 0 2 43,16, 0,79, +,+, 660753 Simple_repeat Simple_repeat 585 chrUn_NT_467950v1 2555 3922 GGLTR7-int 293 - 2555 3922 0 3 280,312,106, 0,947,1261, -,-,-, 660768 LTR ERV1 585 chrUn_NT_467950v1 4592 6795 GGERVL-B-int 609 - 4592 6795 0 2 433,1696, 0,507, -,-, 660771 LTR ERVL 585 chrUn_NT_467950v1 8854 9231 (CAAGG)n 588 + 8854 9231 0 2 181,196, 0,181, +,+, 660775 Simple_repeat Simple_repeat 585 chrUn_NT_467951v1 8801 11110 GGXHOI 487 - 8801 11110 0 2 537,1757, 0,552, -,-, 660789 Satellite W-chromosome 585 chrUn_NT_467952v1 1420 3157 GGERVL-A-int 752 - 1420 3157 0 2 1280,457, 0,1280, -,-, 660794 LTR ERVL 585 chrUn_NT_467955v1 3202 3671 (ACCCATTGGG)n 516 - 3202 3671 0 2 275,79, 0,390, -,-, 660827 Satellite Satellite 585 chrUn_NT_467955v1 3858 4764 (ACCCCATAGGG)n 501 - 3858 4764 0 3 308,47,301, 0,547,605, -,-,-, 660831 Satellite Satellite 585 chrUn_NT_467955v1 4677 5185 (ACCCATTGGG)n 563 - 4677 5185 0 4 146,30,78,136, 0,146,293,372, -,-,-,-, 660833 Satellite Satellite 585 chrUn_NT_467956v1 587 6784 GGXHOI 385 - 587 6784 0 7 723,766,1018,398,885,390,1897, 0,739,1527,2561,2981,3888,4300, -,-,-,-,-,-,-, 660837 Satellite W-chromosome 585 chrUn_NT_467957v1 303 2461 GGXHOI 500 + 303 2461 0 2 685,1153, 0,1005, +,+, 660843 Satellite W-chromosome 585 chrUn_NT_467957v1 2979 5923 GGXHOI 522 + 2979 5923 0 7 156,146,141,508,198,245,19, 0,491,699,1266,1846,2414,2925, +,+,+,+,+,+,+, 660847 Satellite W-chromosome 585 chrUn_NT_467957v1 5998 10686 GGXHOI 544 + 5998 10686 0 8 207,803,148,377,34,253,190,25, 0,590,1828,2284,2973,3468,4166,4663, +,+,+,+,+,+,+,+, 660852 Satellite W-chromosome 585 chrUn_NT_467957v1 10756 11676 GGXHOI 562 + 10756 11676 0 2 153,320, 0,600, +,+, 660860 Satellite W-chromosome 585 chrUn_NT_467960v1 2106 2510 (TACTG)n 283 + 2106 2510 0 2 176,183, 0,221, +,+, 660882 Simple_repeat Simple_repeat 585 chrUn_NT_467960v1 7229 7519 (CTCTATGGGG)n 584 + 7229 7519 0 2 112,62, 0,228, +,+, 660885 Satellite Satellite 585 chrUn_NT_467960v1 7565 7991 (CTCTATGGGG)n 582 + 7565 7991 0 2 133,176, 0,250, +,+, 660888 Satellite Satellite 585 chrUn_NT_467960v1 9642 10140 (ACCCCATAGGG)n 254 + 9642 10140 0 2 300,44, 0,454, +,+, 660892 Satellite Satellite 585 chrUn_NT_467961v1 4313 6682 GGLTR7-int 624 + 4313 6682 0 2 254,791, 0,1578, +,+, 660904 LTR ERV1 585 chrUn_NT_467961v1 6694 9110 GGERV10_LTR 848 - 6694 9110 0 2 38,41, 0,2375, -,-, 660907 LTR ERVL 585 chrUn_NT_467961v1 6861 9068 GGLTR10D-int 916 - 6861 9068 0 2 364,1837, 0,370, -,-, 660908 LTR ERVK 585 chrUn_NT_467961v1 9107 9689 (CGAGG)n 610 + 9107 9689 0 2 179,349, 0,233, +,+, 660909 Simple_repeat Simple_repeat 585 chrUn_NT_467961v1 10242 11359 (CGAGG)n 544 + 10242 11359 0 2 764,323, 0,794, +,+, 660912 Simple_repeat Simple_repeat 585 chrUn_NT_467961v1 11492 12079 (CGAGG)n 544 + 11492 12079 0 3 177,182,184, 0,191,403, +,+,+, 660914 Simple_repeat Simple_repeat 585 chrUn_NT_467962v1 2723 9295 GGXHOI 360 + 2723 9295 0 11 143,166,228,154,669,162,682,1768,824,1321,154, 0,189,386,634,844,1559,1744,2443,4229,5082,6418, +,+,+,+,+,+,+,+,+,+,+, 660916 Satellite W-chromosome 585 chrUn_NT_467962v1 9512 11975 GGXHOI 403 + 9512 11975 0 5 332,839,715,151,285, 0,367,1231,2006,2178, +,+,+,+,+, 660917 Satellite W-chromosome 585 chrUn_NT_467963v1 1079 1373 (ACCCCATAGGG)n 338 - 1079 1373 0 2 141,137, 0,157, -,-, 660921 Satellite Satellite 585 chrUn_NT_467963v1 1769 2130 (ACCCCATAGGG)n 309 - 1769 2130 0 2 148,150, 0,211, -,-, 660922 Satellite Satellite 585 chrUn_NT_467963v1 5890 6376 (CTCTATGGGG)n 487 - 5890 6376 0 3 109,112,173, 0,163,313, -,-,-, 660934 Satellite Satellite 585 chrUn_NT_467963v1 10981 11523 (CAGTA)n 251 + 10981 11523 0 3 193,34,189, 0,302,353, +,+,+, 660938 Simple_repeat Simple_repeat 585 chrUn_NT_467967v1 4070 11509 GGXHOI 370 + 4070 11509 0 3 204,601,6606, 0,220,833, +,+,+, 660972 Satellite W-chromosome 585 chrUn_NT_467969v1 3928 5635 GGXHOI 426 - 3928 5635 0 4 278,1067,170,144, 0,291,1376,1563, -,-,-,-, 660979 Satellite W-chromosome 585 chrUn_NT_467969v1 5894 10972 GGXHOI 417 - 5894 10972 0 7 883,1050,740,221,629,355,1055, 0,900,1990,2764,3006,3651,4023, -,-,-,-,-,-,-, 660981 Satellite W-chromosome 585 chrUn_NT_467971v1 4082 5005 GGXHOI 333 - 4082 5005 0 3 263,211,370, 0,306,553, -,-,-, 660997 Satellite W-chromosome 585 chrUn_NT_467971v1 5662 6862 GGXHOI 358 - 5662 6862 0 2 267,917, 0,283, -,-, 660998 Satellite W-chromosome 585 chrUn_NT_467971v1 9394 10249 GGXHOI 340 - 9394 10249 0 3 285,308,185, 0,322,670, -,-,-, 661002 Satellite W-chromosome 585 chrUn_NT_467973v1 2611 3124 GGLTR3F1 760 + 2611 3124 0 2 405,75, 0,438, +,+, 661027 LTR ERVL 585 chrUn_NT_467973v1 8359 8990 GGERVK10-int 323 - 8359 8990 0 3 82,140,105, 0,221,526, -,-,-, 661032 LTR ERVK 585 chrUn_NT_467974v1 5273 5746 GGLTR3F2 598 - 5273 5746 0 2 215,232, 0,241, -,-, 661040 LTR ERVL 585 chrUn_NT_467975v1 744 4311 GGXHOI 578 + 744 4311 0 3 776,298,656, 0,1867,2911, +,+,+, 661048 Satellite W-chromosome 585 chrUn_NT_467975v1 4356 5212 GGXHOI 508 + 4356 5212 0 2 28,511, 0,345, +,+, 661052 Satellite W-chromosome 585 chrUn_NT_467975v1 4881 7313 Sat-CR1_GG 176 + 4881 7313 0 2 371,1519, 0,913, +,+, 661053 Satellite Satellite 585 chrUn_NT_467975v1 5837 12100 GGXHOI 564 + 5837 12100 0 7 652,617,106,22,162,375,67, 0,970,1628,2219,3476,5295,6196, +,+,+,+,+,+,+, 661055 Satellite W-chromosome 585 chrUn_NT_467977v1 106 661 CR1-X 423 - 106 661 0 3 218,130,109, 0,259,446, -,-,-, 661066 LINE CR1 585 chrUn_NT_467980v1 8991 10115 CR1-B2 687 - 8991 10115 0 2 897,224, 0,900, -,-, 661132 LINE CR1 585 chrUn_NT_467981v1 1268 2159 GGXHOI 391 - 1268 2159 0 3 253,203,408, 0,266,483, -,-,-, 661134 Satellite W-chromosome 585 chrUn_NT_467981v1 2240 4287 GGXHOI 413 - 2240 4287 0 2 1006,1020, 0,1027, -,-, 661135 Satellite W-chromosome 585 chrUn_NT_467981v1 4280 5170 (CGAGG)n 623 + 4280 5170 0 3 250,312,69, 0,261,821, +,+,+, 661136 Simple_repeat Simple_repeat 585 chrUn_NT_467981v1 6682 7457 (CCTTG)n 695 + 6682 7457 0 3 379,199,197, 0,379,578, +,+,+, 661139 Simple_repeat Simple_repeat 585 chrUn_NT_467981v1 8426 8853 (CCTTG)n 676 + 8426 8853 0 2 203,209, 0,218, +,+, 661145 Simple_repeat Simple_repeat 585 chrUn_NT_467981v1 8874 10903 (CCTTG)n 642 + 8874 10903 0 7 461,101,22,262,90,163,220, 0,461,741,945,1359,1465,1809, +,+,+,+,+,+,+, 661147 Simple_repeat Simple_repeat 585 chrUn_NT_467981v1 10987 11518 (CCTTG)n 623 + 10987 11518 0 2 181,331, 0,200, +,+, 661153 Simple_repeat Simple_repeat 585 chrUn_NT_467982v1 3503 4428 GGXHOI 500 + 3503 4428 0 2 154,716, 0,209, +,+, 661161 Satellite W-chromosome 585 chrUn_NT_467982v1 4569 5166 GGXHOI 494 + 4569 5166 0 2 252,334, 0,263, +,+, 661162 Satellite W-chromosome 585 chrUn_NT_467982v1 8307 9623 GGXHOI 580 + 8307 9623 0 2 316,728, 0,588, +,+, 661164 Satellite W-chromosome 585 chrUn_NT_467982v1 9689 11540 GGXHOI 536 + 9689 11540 0 2 1244,558, 0,1293, +,+, 661166 Satellite W-chromosome 585 chrUn_NT_467982v1 11630 12095 GGXHOI 482 + 11630 12095 0 2 242,182, 0,283, +,+, 661167 Satellite W-chromosome 585 chrUn_NT_467983v1 11173 11930 (CAAGG)n 539 + 11173 11930 0 3 381,172,172, 0,393,585, +,+,+, 661170 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 235 1301 (CCTTG)n 637 + 235 1301 0 3 472,202,210, 0,654,856, +,+,+, 661191 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 2992 4404 (CCTTG)n 529 + 2992 4404 0 6 273,192,181,183,180,326, 0,284,494,696,904,1086, +,+,+,+,+,+, 661202 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 4844 5482 (CCTTG)n 641 + 4844 5482 0 2 215,376, 0,262, +,+, 661206 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 7271 7934 (CCTTG)n 581 + 7271 7934 0 2 184,452, 0,211, +,+, 661216 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 9030 9401 (CCTTG)n 716 + 9030 9401 0 2 179,175, 0,196, +,+, 661222 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 9974 10379 (CCTTG)n 559 + 9974 10379 0 2 188,198, 0,207, +,+, 661226 Simple_repeat Simple_repeat 585 chrUn_NT_467986v1 11474 11842 (CCTTG)n 572 + 11474 11842 0 2 149,39, 0,329, +,+, 661232 Simple_repeat Simple_repeat 585 chrUn_NT_467988v1 3232 3564 (ACCCCATAGGG)n 365 - 3232 3564 0 2 171,118, 0,214, -,-, 661246 Satellite Satellite 585 chrUn_NT_467988v1 3940 4636 (ACCCCATAGGG)n 425 - 3940 4636 0 3 236,118,258, 0,278,438, -,-,-, 661249 Satellite Satellite 585 chrUn_NT_467988v1 4685 5170 (ACCCCATAGGG)n 449 - 4685 5170 0 3 132,118,126, 0,194,359, -,-,-, 661251 Satellite Satellite 585 chrUn_NT_467988v1 5259 5576 (ACCCCATAGGG)n 301 - 5259 5576 0 2 137,137, 0,180, -,-, 661252 Satellite Satellite 585 chrUn_NT_467988v1 10239 10356 (C)n 674 + 10239 10356 0 2 26,34, 0,83, +,+, 661259 Simple_repeat Simple_repeat 585 chrUn_NT_467988v1 10469 10545 (C)n 730 + 10469 10545 0 2 30,27, 0,49, +,+, 661260 Simple_repeat Simple_repeat 585 chrUn_NT_467988v1 11133 11284 (C)n 823 + 11133 11284 0 3 25,23,25, 0,43,126, +,+,+, 661262 Simple_repeat Simple_repeat 585 chrUn_NT_467988v1 11672 11747 (C)n 784 + 11672 11747 0 2 28,22, 0,53, +,+, 661265 Simple_repeat Simple_repeat 585 chrUn_NT_467989v1 590 1356 GGXHOI 354 - 590 1356 0 2 240,469, 0,297, -,-, 661269 Satellite W-chromosome 585 chrUn_NT_467989v1 5559 6519 GGXHOI 371 - 5559 6519 0 2 269,670, 0,290, -,-, 661276 Satellite W-chromosome 585 chrUn_NT_467989v1 6618 8104 GGXHOI 363 - 6618 8104 0 3 634,300,472, 0,651,1014, -,-,-, 661277 Satellite W-chromosome 585 chrUn_NT_467990v1 90 661 (CATGC)n 642 + 90 661 0 2 166,398, 0,173, +,+, 661283 Simple_repeat Simple_repeat 585 chrUn_NT_467990v1 673 1066 (CATGC)n 631 + 673 1066 0 2 199,194, 0,199, +,+, 661285 Simple_repeat Simple_repeat 585 chrUn_NT_467990v1 2384 3670 (TTGGGG)n 635 + 2384 3670 0 2 319,956, 0,330, +,+, 661288 Simple_repeat Simple_repeat 585 chrUn_NT_467990v1 5215 5680 (CAGTG)n 622 + 5215 5680 0 2 227,29, 0,436, +,+, 661293 Simple_repeat Simple_repeat 585 chrUn_NT_467991v1 2432 5012 GGXHOI 398 + 2432 5012 0 3 334,645,1536, 0,349,1044, +,+,+, 661301 Satellite W-chromosome 585 chrUn_NT_467991v1 5097 12038 GGXHOI 420 + 5097 12038 0 9 338,146,2473,647,1956,645,187,147,245, 0,349,508,2996,3695,5666,6332,6536,6696, +,+,+,+,+,+,+,+,+, 661302 Satellite W-chromosome 585 chrUn_NT_467993v1 717 1748 (CCTTG)n 505 + 717 1748 0 3 199,545,223, 0,235,808, +,+,+, 661312 Simple_repeat Simple_repeat 585 chrUn_NT_467993v1 1778 3246 GGXHOI 364 - 1778 3246 0 2 441,969, 0,499, -,-, 661313 Satellite W-chromosome 585 chrUn_NT_467993v1 6755 7263 GGXHOI 267 - 6755 7263 0 2 244,244, 0,264, -,-, 661318 Satellite W-chromosome 585 chrUn_NT_467993v1 7378 8922 GGXHOI 379 - 7378 8922 0 2 1009,472, 0,1072, -,-, 661319 Satellite W-chromosome 585 chrUn_NT_467993v1 11153 12067 GGXHOI 376 - 11153 12067 0 2 514,337, 0,577, -,-, 661323 Satellite W-chromosome 585 chrUn_NT_467994v1 695 2180 GGXHOI 388 - 695 2180 0 7 171,209,165,137,228,178,170, 0,230,483,679,845,1124,1315, -,-,-,-,-,-,-, 661326 Satellite W-chromosome 585 chrUn_NT_467994v1 2252 4119 GGXHOI 396 - 2252 4119 0 7 217,135,135,364,53,497,302, 0,263,415,584,965,1039,1565, -,-,-,-,-,-,-, 661327 Satellite W-chromosome 585 chrUn_NT_467994v1 4190 4857 GGXHOI 290 - 4190 4857 0 3 120,252,259, 0,135,408, -,-,-, 661328 Satellite W-chromosome 585 chrUn_NT_467994v1 4924 6999 GGXHOI 362 - 4924 6999 0 10 134,152,291,120,300,144,217,132,264,120, 0,151,316,623,755,1067,1242,1494,1675,1955, -,-,-,-,-,-,-,-,-,-, 661329 Satellite W-chromosome 585 chrUn_NT_467994v1 7102 8421 GGXHOI 381 - 7102 8421 0 3 654,149,469, 0,667,850, -,-,-, 661330 Satellite W-chromosome 585 chrUn_NT_467994v1 8494 9755 GGXHOI 354 - 8494 9755 0 5 229,95,288,442,86, 0,282,414,717,1175, -,-,-,-,-, 661331 Satellite W-chromosome 585 chrUn_NT_467994v1 9912 10404 GGXHOI 381 - 9912 10404 0 2 182,287, 0,205, -,-, 661332 Satellite W-chromosome 585 chrUn_NT_467994v1 10503 12077 GGXHOI 364 - 10503 12077 0 5 131,127,199,577,415, 0,144,286,533,1159, -,-,-,-,-, 661333 Satellite W-chromosome 585 chrUn_NT_467995v1 227 618 GGXHOI 286 - 227 618 0 2 242,127, 0,264, -,-, 661335 Satellite W-chromosome 585 chrUn_NT_467995v1 715 1345 GGXHOI 411 - 715 1345 0 2 341,269, 0,361, -,-, 661336 Satellite W-chromosome 585 chrUn_NT_467995v1 1443 4201 GGXHOI 399 - 1443 4201 0 6 316,388,435,226,278,1004, 0,335,742,1190,1431,1754, -,-,-,-,-,-, 661337 Satellite W-chromosome 585 chrUn_NT_467995v1 4513 6178 GGXHOI 375 - 4513 6178 0 2 533,1086, 0,579, -,-, 661339 Satellite W-chromosome 585 chrUn_NT_467995v1 7297 8909 GGXHOI 397 - 7297 8909 0 2 1034,563, 0,1049, -,-, 661341 Satellite W-chromosome 585 chrUn_NT_467995v1 9013 11212 GGXHOI 406 - 9013 11212 0 4 186,614,723,584, 0,201,830,1615, -,-,-,-, 661342 Satellite W-chromosome 585 chrUn_NT_467995v1 11302 12016 GGXHOI 415 - 11302 12016 0 2 270,397, 0,317, -,-, 661343 Satellite W-chromosome 585 chrUn_NT_467996v1 4381 5935 GGERVL-B-int 796 + 4381 5935 0 2 84,1469, 0,85, +,+, 661348 LTR ERVL 585 chrUn_NT_467996v1 6672 8073 GGLTR7-int 328 + 6672 8073 0 3 100,292,282, 0,126,1119, +,+,+, 661351 LTR ERV1 585 chrUn_NT_467997v1 2522 8329 GGLTR7A 705 - 2522 8329 0 6 113,256,1518,318,3522,51, 0,114,371,1904,2222,5756, -,-,-,-,-,-, 661355 LTR ERV1 585 chrUn_NT_467997v1 9109 12075 Z-REP 784 + 9109 12075 0 2 776,2179, 0,787, +,+, 661357 Satellite macro 585 chrUn_NT_467999v1 2024 4834 GGERV28_I-int 610 + 2024 4834 0 4 133,61,294,477, 0,294,2039,2333, +,+,+,+, 661368 LTR ERVK 585 chrUn_NT_467999v1 2763 3611 GGLTR7-int 797 + 2763 3611 0 3 217,260,352, 0,235,496, +,+,+, 661369 LTR ERV1 585 chrUn_NT_467999v1 7362 9383 GGERVL-A-int 897 - 7362 9383 0 2 482,1539, 0,482, -,-, 661372 LTR ERVL 585 chrUn_NT_468000v1 10357 11695 GGLTR7B 352 - 10357 11695 0 2 282,100, 0,1238, -,-, 661380 LTR ERV1 585 chrUn_NT_468003v1 3611 5155 GGXHOI 376 - 3611 5155 0 2 1009,472, 0,1072, -,-, 661396 Satellite W-chromosome 585 chrUn_NT_468003v1 5254 6305 GGXHOI 376 - 5254 6305 0 2 516,472, 0,579, -,-, 661397 Satellite W-chromosome 585 chrUn_NT_468003v1 9274 10325 GGXHOI 378 - 9274 10325 0 2 516,472, 0,579, -,-, 661403 Satellite W-chromosome 585 chrUn_NT_468004v1 5142 6413 CR1-H 587 + 5142 6413 0 2 1158,113, 0,1158, +,+, 661410 LINE CR1 585 chrUn_NT_468004v1 8960 9583 CR1-H 677 + 8960 9583 0 2 478,139, 0,484, +,+, 661414 LINE CR1 585 chrUn_NT_468006v1 1630 2336 GGXHOI 509 + 1630 2336 0 2 172,492, 0,214, +,+, 661428 Satellite W-chromosome 585 chrUn_NT_468006v1 6026 6515 GGXHOI 507 + 6026 6515 0 2 144,334, 0,155, +,+, 661432 Satellite W-chromosome 585 chrUn_NT_468008v1 316 2423 GGXHOI 369 - 316 2423 0 3 799,170,1047, 0,828,1060, -,-,-, 661448 Satellite W-chromosome 585 chrUn_NT_468008v1 3665 5650 GGXHOI 383 - 3665 5650 0 2 1008,960, 0,1025, -,-, 661451 Satellite W-chromosome 585 chrUn_NT_468010v1 3126 4363 GGXHOI 407 + 3126 4363 0 2 816,401, 0,836, +,+, 661479 Satellite W-chromosome 585 chrUn_NT_468010v1 5194 6359 GGXHOI 409 + 5194 6359 0 2 744,401, 0,764, +,+, 661481 Satellite W-chromosome 585 chrUn_NT_468010v1 6608 8105 GGXHOI 407 + 6608 8105 0 2 456,984, 0,513, +,+, 661482 Satellite W-chromosome 585 chrUn_NT_468010v1 9597 10871 GGXHOI 375 + 9597 10871 0 2 478,778, 0,496, +,+, 661485 Satellite W-chromosome 585 chrUn_NT_468012v1 207 1759 GGXHOI 559 + 207 1759 0 4 206,17,159,529, 0,508,537,1023, +,+,+,+, 661490 Satellite W-chromosome 585 chrUn_NT_468012v1 1799 11387 GGXHOI 551 + 1799 11387 0 18 208,298,194,299,314,797,243,111,196,17,157,270,206,301,194,199,194,24, 0,528,1134,1649,2137,2775,3893,4585,5019,5627,5656,6135,6792,7322,7934,8451,9061,9564, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 661494 Satellite W-chromosome 585 chrUn_NT_468012v1 11458 12051 GGXHOI 562 + 11458 12051 0 2 148,66, 0,527, +,+, 661511 Satellite W-chromosome 585 chrUn_NT_468015v1 4510 6926 GGXHOI 375 + 4510 6926 0 2 1405,967, 0,1449, +,+, 661534 Satellite W-chromosome 585 chrUn_NT_468015v1 8830 10447 GGXHOI 373 + 8830 10447 0 2 470,1084, 0,533, +,+, 661538 Satellite W-chromosome 585 chrUn_NT_468016v1 3206 8689 GGXHOI 351 - 3206 8689 0 5 135,467,2077,621,2026, 0,154,673,2778,3457, -,-,-,-,-, 661543 Satellite W-chromosome 585 chrUn_NT_468016v1 8931 10046 GGXHOI 312 - 8931 10046 0 3 222,264,586, 0,239,529, -,-,-, 661544 Satellite W-chromosome 585 chrUn_NT_468018v1 5657 5887 (ACCCATAGGG)n 407 + 5657 5887 0 2 95,93, 0,137, +,+, 661593 Satellite Satellite 585 chrUn_NT_468018v1 5903 6468 (ACCCCATAGGG)n 347 + 5903 6468 0 3 233,132,142, 0,276,423, +,+,+, 661594 Satellite Satellite 585 chrUn_NT_468018v1 11196 11303 (C)n 638 + 11196 11303 0 2 35,27, 0,80, +,+, 661606 Simple_repeat Simple_repeat 585 chrUn_NT_468019v1 3566 3695 G-rich 651 + 3566 3695 0 2 36,41, 0,88, +,+, 661610 Low_complexity Low_complexity 585 chrUn_NT_468019v1 5674 11345 GGLTR7-int 778 - 5674 11345 0 6 114,257,1553,336,1296,47, 0,115,373,1935,2271,5624, -,-,-,-,-,-, 661612 LTR ERV1 585 chrUn_NT_468020v1 5914 6262 (CATTG)n 361 + 5914 6262 0 2 211,125, 0,223, +,+, 661624 Simple_repeat Simple_repeat 585 chrUn_NT_468020v1 6544 6769 (CATTG)n 343 + 6544 6769 0 2 106,107, 0,118, +,+, 661628 Simple_repeat Simple_repeat 585 chrUn_NT_468020v1 8575 9066 (CATTG)n 202 + 8575 9066 0 2 217,217, 0,274, +,+, 661637 Simple_repeat Simple_repeat 585 chrUn_NT_468020v1 9192 9880 (CATTG)n 282 + 9192 9880 0 2 460,228, 0,460, +,+, 661638 Simple_repeat Simple_repeat 585 chrUn_NT_468021v1 8762 9379 CR1-H 660 - 8762 9379 0 2 139,472, 0,145, -,-, 661649 LINE CR1 585 chrUn_NT_468021v1 11842 12041 CR1-H 620 - 11842 12041 0 2 116,83, 0,116, -,-, 661653 LINE CR1 585 chrUn_NT_468023v1 1519 7285 GGXHOI 395 + 1519 7285 0 2 1293,4457, 0,1309, +,+, 661658 Satellite W-chromosome 585 chrUn_NT_468023v1 7388 11481 GGXHOI 381 + 7388 11481 0 3 846,2163,1047, 0,862,3046, +,+,+, 661659 Satellite W-chromosome 585 chrUn_NT_468024v1 551 3245 GGERVL-B-int 705 - 551 3245 0 2 907,1763, 0,931, -,-, 661662 LTR ERVL 585 chrUn_NT_468024v1 6371 6961 (CAGGC)n 473 + 6371 6961 0 3 141,47,185, 0,319,405, +,+,+, 661672 Simple_repeat Simple_repeat 585 chrUn_NT_468024v1 7971 8549 (CAAGG)n 602 + 7971 8549 0 2 165,60, 0,518, +,+, 661678 Simple_repeat Simple_repeat 585 chrUn_NT_468025v1 1118 1699 GGXHOI 302 + 1118 1699 0 2 149,388, 0,193, +,+, 661686 Satellite W-chromosome 585 chrUn_NT_468025v1 4184 8296 GGXHOI 358 + 4184 8296 0 5 456,1302,802,637,757, 0,479,1838,2699,3355, +,+,+,+,+, 661689 Satellite W-chromosome 585 chrUn_NT_468026v1 1963 11898 GGXHOI 384 + 1963 11898 0 5 1588,1199,153,5463,1471, 0,1604,2815,2985,8464, +,+,+,+,+, 661696 Satellite W-chromosome 585 chrUn_NT_468027v1 4049 6495 GGXHOI 387 - 4049 6495 0 3 145,1832,400, 0,166,2046, -,-,-, 661700 Satellite W-chromosome 585 chrUn_NT_468027v1 6706 9326 GGXHOI 392 - 6706 9326 0 6 354,126,126,150,312,1462, 0,372,524,672,834,1158, -,-,-,-,-,-, 661701 Satellite W-chromosome 585 chrUn_NT_468027v1 9749 11754 GGXHOI 397 - 9749 11754 0 4 786,674,342,151, 0,805,1490,1854, -,-,-,-, 661703 Satellite W-chromosome 585 chrUn_NT_468030v1 2737 3360 CR1-H 678 - 2737 3360 0 2 139,478, 0,145, -,-, 661735 LINE CR1 585 chrUn_NT_468030v1 5393 6667 CR1-H 591 - 5393 6667 0 2 117,1157, 0,117, -,-, 661739 LINE CR1 585 chrUn_NT_468030v1 11589 11699 (TTTGC)n 336 + 11589 11699 0 2 52,9, 0,101, +,+, 661742 Simple_repeat Simple_repeat 585 chrUn_NT_468031v1 407 1102 (CCTCG)n 516 + 407 1102 0 2 104,307, 0,388, +,+, 661747 Simple_repeat Simple_repeat 585 chrUn_NT_468031v1 1133 1547 (CCCCG)n 446 + 1133 1547 0 2 149,82, 0,332, +,+, 661749 Simple_repeat Simple_repeat 585 chrUn_NT_468031v1 1672 5582 (CCTCG)n 524 + 1672 5582 0 13 180,184,114,41,465,20,182,407,272,34,396,337,185, 0,205,433,724,786,1435,1470,1698,2281,2731,2940,3360,3725, +,+,+,+,+,+,+,+,+,+,+,+,+, 661751 Simple_repeat Simple_repeat 585 chrUn_NT_468031v1 5669 6547 (CCTCG)n 604 + 5669 6547 0 2 299,402, 0,476, +,+, 661758 Simple_repeat Simple_repeat 585 chrUn_NT_468031v1 6593 9021 GGERV10_LTR 874 + 6593 9021 0 2 41,38, 0,2390, +,+, 661761 LTR ERVL 585 chrUn_NT_468031v1 6635 8851 GGLTR10D-int 921 + 6635 8851 0 2 1849,364, 0,1852, +,+, 661762 LTR ERVK 585 chrUn_NT_468031v1 9033 11391 GGLTR7-int 533 - 9033 11391 0 3 794,813,282, 0,802,2076, -,-,-, 661763 LTR ERV1 585 chrUn_NT_468032v1 7461 7575 A-rich 522 + 7461 7575 0 2 48,34, 0,80, +,+, 661768 Low_complexity Low_complexity 585 chrUn_NT_468033v1 6058 7307 Char12Mar1_GG 590 - 6058 7307 0 2 121,580, 0,669, -,-, 661781 DNA hAT-Charlie 585 chrUn_NT_468033v1 9745 10365 CR1-H 382 - 9745 10365 0 2 375,209, 0,411, -,-, 661784 LINE CR1 585 chrUn_NT_468035v1 2602 5219 GGERVL-B-int 717 + 2602 5219 0 4 208,48,1073,907, 0,577,637,1710, +,+,+,+, 661799 LTR ERVL 585 chrUn_NT_468035v1 5956 7362 GGLTR7-int 316 + 5956 7362 0 3 101,224,288, 0,141,1118, +,+,+, 661801 LTR ERV1 585 chrUn_NT_468037v1 9153 9713 GGXHOI 319 + 9153 9713 0 3 217,154,130, 0,255,430, +,+,+, 661832 Satellite W-chromosome 585 chrUn_NT_468037v1 9814 10483 GGXHOI 382 + 9814 10483 0 2 277,360, 0,309, +,+, 661833 Satellite W-chromosome 585 chrUn_NT_468037v1 10744 11755 GGXHOI 382 + 10744 11755 0 2 441,524, 0,487, +,+, 661834 Satellite W-chromosome 585 chrUn_NT_468041v1 9782 11947 GGLTR7-int 559 + 9782 11947 0 2 103,1600, 0,565, +,+, 661879 LTR ERV1 585 chrUn_NT_468042v1 5142 5282 (TGTCCCCA)n 788 + 5142 5282 0 2 47,62, 0,78, +,+, 661888 Simple_repeat Simple_repeat 585 chrUn_NT_468048v1 5194 5544 (CAGGC)n 528 + 5194 5544 0 2 146,35, 0,315, +,+, 661928 Simple_repeat Simple_repeat 585 chrUn_NT_468048v1 5670 6082 (CAAGG)n 600 + 5670 6082 0 2 200,28, 0,384, +,+, 661931 Simple_repeat Simple_repeat 585 chrUn_NT_468048v1 6130 7466 (CAGGC)n 522 + 6130 7466 0 5 247,263,133,275,198, 0,247,688,863,1138, +,+,+,+,+, 661933 Simple_repeat Simple_repeat 585 chrUn_NT_468048v1 7754 8079 (CAAGG)n 522 + 7754 8079 0 2 91,54, 0,271, +,+, 661938 Simple_repeat Simple_repeat 585 chrUn_NT_468048v1 8737 9625 CR1-F0 902 + 8737 9625 0 2 755,133, 0,755, +,+, 661943 LINE CR1 585 chrUn_NT_468049v1 8167 8747 ENS1-int 456 - 8167 8747 0 2 70,129, 0,451, -,-, 661949 LTR ERVL 585 chrUn_NT_468052v1 559 4485 GGXHOI 383 + 559 4485 0 9 995,225,222,466,171,365,419,263,577, 0,1051,1294,1539,2022,2243,2627,3064,3349, +,+,+,+,+,+,+,+,+, 661971 Satellite W-chromosome 585 chrUn_NT_468052v1 4687 4983 GGXHOI 403 + 4687 4983 0 2 110,175, 0,121, +,+, 661972 Satellite W-chromosome 585 chrUn_NT_468052v1 5057 8949 GGXHOI 393 + 5057 8949 0 3 190,1986,1671, 0,211,2221, +,+,+, 661973 Satellite W-chromosome 585 chrUn_NT_468052v1 9244 11547 GGXHOI 325 + 9244 11547 0 3 222,1919,126, 0,238,2177, +,+,+, 661975 Satellite W-chromosome 585 chrUn_NT_468053v1 5676 6858 GGXHOI 308 + 5676 6858 0 2 866,294, 0,888, +,+, 661983 Satellite W-chromosome 585 chrUn_NT_468053v1 8756 9744 GGXHOI 321 + 8756 9744 0 2 517,450, 0,538, +,+, 661986 Satellite W-chromosome 585 chrUn_NT_468053v1 10604 10927 GGXHOI 379 + 10604 10927 0 2 118,178, 0,145, +,+, 661988 Satellite W-chromosome 585 chrUn_NT_468055v1 911 1178 (GCCCCACAGCT)n 586 + 911 1178 0 2 113,103, 0,164, +,+, 661997 Satellite Satellite 585 chrUn_NT_468055v1 2142 2442 (GCCCCACAGCT)n 522 + 2142 2442 0 2 113,187, 0,113, +,+, 662005 Satellite Satellite 585 chrUn_NT_468055v1 6090 6171 (G)n 741 + 6090 6171 0 2 26,25, 0,56, +,+, 662009 Simple_repeat Simple_repeat 585 chrUn_NT_468056v1 1330 2988 GGXHOI 349 - 1330 2988 0 2 956,682, 0,976, -,-, 662018 Satellite W-chromosome 585 chrUn_NT_468056v1 3072 6034 GGXHOI 335 - 3072 6034 0 4 430,343,1500,566, 0,451,850,2396, -,-,-,-, 662019 Satellite W-chromosome 585 chrUn_NT_468056v1 6253 7419 GGXHOI 343 - 6253 7419 0 3 262,305,484, 0,323,682, -,-,-, 662020 Satellite W-chromosome 585 chrUn_NT_468056v1 8965 10726 GGXHOI 345 - 8965 10726 0 2 472,1228, 0,533, -,-, 662024 Satellite W-chromosome 585 chrUn_NT_468056v1 11227 11868 GGXHOI 308 - 11227 11868 0 2 168,418, 0,223, -,-, 662026 Satellite W-chromosome 585 chrUn_NT_468058v1 71 2328 Sat-CR1_GG 162 - 71 2328 0 2 383,132, 0,2125, -,-, 662038 Satellite Satellite 585 chrUn_NT_468058v1 4090 8634 GGXHOI 554 - 4090 8634 0 4 968,180,164,1574, 0,1246,2220,2970, -,-,-,-, 662042 Satellite W-chromosome 585 chrUn_NT_468058v1 8646 11982 GGXHOI 537 - 8646 11982 0 7 279,332,328,68,67,89,252, 0,656,1365,2232,2314,2971,3084, -,-,-,-,-,-,-, 662046 Satellite W-chromosome 585 chrUn_NT_468059v1 648 735 (G)n 808 + 648 735 0 2 19,24, 0,63, +,+, 662052 Simple_repeat Simple_repeat 585 chrUn_NT_468061v1 7808 11870 GGXHOI 395 + 7808 11870 0 3 1351,261,2368, 0,1382,1694, +,+,+, 662104 Satellite W-chromosome 585 chrUn_NT_468064v1 248 4487 GGXHOI 357 - 248 4487 0 12 390,722,618,203,252,374,162,362,171,285,130,248, 0,450,1214,1851,2077,2343,2728,2904,3315,3525,3850,3991, -,-,-,-,-,-,-,-,-,-,-,-, 662112 Satellite W-chromosome 585 chrUn_NT_468064v1 10140 11317 (TTAGGG)n 606 + 10140 11317 0 6 128,104,55,213,155,14, 0,186,465,534,803,1163, +,+,+,+,+,+, 662118 Simple_repeat Simple_repeat 585 chrUn_NT_468064v1 11458 11979 (TTAGGG)n 743 + 11458 11979 0 3 191,170,48, 0,251,473, +,+,+, 662122 Simple_repeat Simple_repeat 585 chrUn_NT_468065v1 4742 11944 GGXHOI 363 + 4742 11944 0 5 4077,244,1684,236,824, 0,4099,4362,6085,6378, +,+,+,+,+, 662126 Satellite W-chromosome 585 chrUn_NT_468066v1 1589 2239 (CAAGG)n 526 + 1589 2239 0 2 374,259, 0,391, +,+, 662135 Simple_repeat Simple_repeat 585 chrUn_NT_468066v1 2332 2578 (CCTTG)n 486 + 2332 2578 0 2 178,24, 0,222, +,+, 662136 Simple_repeat Simple_repeat 585 chrUn_NT_468066v1 2631 3276 (CCTTG)n 497 + 2631 3276 0 3 155,135,54, 0,174,591, +,+,+, 662138 Simple_repeat Simple_repeat 585 chrUn_NT_468066v1 6481 7130 (CAAGG)n 529 + 6481 7130 0 2 373,250, 0,399, +,+, 662161 Simple_repeat Simple_repeat 585 chrUn_NT_468066v1 7128 8025 (CCTTG)n 492 + 7128 8025 0 3 302,18,247, 0,479,650, +,+,+, 662162 Simple_repeat Simple_repeat 585 chrUn_NT_468066v1 10247 11229 GGXHOI 339 + 10247 11229 0 2 422,533, 0,449, +,+, 662169 Satellite W-chromosome 585 chrUn_NT_468067v1 6975 11937 GGXHOI 584 - 6975 11937 0 6 288,296,149,572,570,787, 0,904,1211,1920,3048,4175, -,-,-,-,-,-, 662178 Satellite W-chromosome 585 chrUn_NT_468068v1 9266 10669 GGLTR7-int 298 - 9266 10669 0 3 277,281,102, 0,983,1301, -,-,-, 662191 LTR ERV1 585 chrUn_NT_468069v1 2498 11957 GGXHOI 385 - 2498 11957 0 3 3340,180,5866, 0,3366,3593, -,-,-, 662195 Satellite W-chromosome 585 chrUn_NT_468070v1 1203 1642 CR1-H 618 - 1203 1642 0 2 158,281, 0,158, -,-, 662199 LINE CR1 585 chrUn_NT_468071v1 6063 6296 (CTCTATGGGG)n 536 + 6063 6296 0 2 109,113, 0,120, +,+, 662217 Satellite Satellite 585 chrUn_NT_468071v1 7065 7860 (ACCCCATAGGG)n 437 - 7065 7860 0 3 84,32,422, 0,326,373, -,-,-, 662222 Satellite Satellite 585 chrUn_NT_468071v1 7915 8454 (ACCCCATAGGG)n 510 - 7915 8454 0 2 359,164, 0,375, -,-, 662225 Satellite Satellite 585 chrUn_NT_468073v1 3118 3691 (CGAGG)n 470 + 3118 3691 0 3 168,181,184, 0,183,389, +,+,+, 662263 Simple_repeat Simple_repeat 585 chrUn_NT_468073v1 5027 5701 (CGAGG)n 479 + 5027 5701 0 2 174,449, 0,225, +,+, 662268 Simple_repeat Simple_repeat 585 chrUn_NT_468073v1 5746 6040 (CGAGG)n 455 + 5746 6040 0 2 72,179, 0,115, +,+, 662270 Simple_repeat Simple_repeat 585 chrUn_NT_468073v1 6187 6683 (CGAGG)n 474 + 6187 6683 0 2 291,25, 0,471, +,+, 662272 Simple_repeat Simple_repeat 585 chrUn_NT_468073v1 7020 8027 (CGAGG)n 494 + 7020 8027 0 3 200,341,440, 0,215,567, +,+,+, 662277 Simple_repeat Simple_repeat 585 chrUn_NT_468074v1 5813 6742 GGXHOI 374 - 5813 6742 0 2 137,779, 0,150, -,-, 662300 Satellite W-chromosome 585 chrUn_NT_468074v1 6830 10539 GGXHOI 391 - 6830 10539 0 9 223,173,444,1222,137,147,397,416,348, 0,261,450,919,2181,2358,2523,2931,3361, -,-,-,-,-,-,-,-,-, 662301 Satellite W-chromosome 585 chrUn_NT_468074v1 10604 11934 GGXHOI 438 - 10604 11934 0 4 292,267,336,350, 0,309,605,980, -,-,-,-, 662302 Satellite W-chromosome 585 chrUn_NT_468075v1 10765 11955 GGERVL-A-int 655 + 10765 11955 0 3 446,222,468, 0,446,722, +,+,+, 662309 LTR ERVL 585 chrUn_NT_468077v1 11251 11838 GGLTR7A 722 - 11251 11838 0 4 112,255,73,145, 0,113,369,442, -,-,-,-, 662318 LTR ERV1 585 chrUn_NT_468078v1 989 2671 (CGAGG)n 487 + 989 2671 0 6 180,626,173,181,174,183, 0,214,866,1073,1267,1499, +,+,+,+,+,+, 662323 Simple_repeat Simple_repeat 585 chrUn_NT_468078v1 2813 3630 (CGAGG)n 518 + 2813 3630 0 2 348,421, 0,396, +,+, 662325 Simple_repeat Simple_repeat 585 chrUn_NT_468078v1 3632 3687 (GGCGA)n 618 + 3632 3687 0 2 8,11, 0,44, +,+, 662326 Simple_repeat Simple_repeat 585 chrUn_NT_468078v1 3970 5217 (CGAGG)n 509 + 3970 5217 0 3 183,431,436, 0,196,811, +,+,+, 662330 Simple_repeat Simple_repeat 585 chrUn_NT_468078v1 6397 7282 (CGAGG)n 519 + 6397 7282 0 2 472,358, 0,527, +,+, 662337 Simple_repeat Simple_repeat 585 chrUn_NT_468078v1 8398 10000 (CGAGG)n 548 + 8398 10000 0 6 182,277,158,251,40,248, 0,240,530,699,1138,1354, +,+,+,+,+,+, 662343 Simple_repeat Simple_repeat 585 chrUn_NT_468078v1 11287 11933 (CCTCG)n 502 + 11287 11933 0 3 271,163,179, 0,283,467, +,+,+, 662351 Simple_repeat Simple_repeat 585 chrUn_NT_468080v1 2525 2908 (CAAGG)n 555 + 2525 2908 0 2 181,184, 0,199, +,+, 662394 Simple_repeat Simple_repeat 585 chrUn_NT_468080v1 3456 3973 (CAGGC)n 501 + 3456 3973 0 2 323,194, 0,323, +,+, 662399 Simple_repeat Simple_repeat 585 chrUn_NT_468080v1 3939 4290 (CAAGG)n 484 + 3939 4290 0 2 118,54, 0,297, +,+, 662400 Simple_repeat Simple_repeat 585 chrUn_NT_468080v1 4530 5533 (CAAGG)n 575 + 4530 5533 0 4 179,243,30,194, 0,179,601,809, +,+,+,+, 662404 Simple_repeat Simple_repeat 585 chrUn_NT_468080v1 5547 5843 (CAAGG)n 593 + 5547 5843 0 2 183,101, 0,195, +,+, 662408 Simple_repeat Simple_repeat 585 chrUn_NT_468080v1 5838 6731 CR1-F0 885 + 5838 6731 0 2 760,133, 0,760, +,+, 662409 LINE CR1 585 chrUn_NT_468081v1 406 933 Sat-CR1_GG 144 - 406 933 0 2 106,160, 0,367, -,-, 662417 Satellite Satellite 585 chrUn_NT_468081v1 4672 5053 Sat-CR1_GG 162 - 4672 5053 0 2 141,15, 0,366, -,-, 662428 Satellite Satellite 585 chrUn_NT_468081v1 6112 6624 Sat-CR1_GG 176 - 6112 6624 0 2 122,149, 0,363, -,-, 662432 Satellite Satellite 585 chrUn_NT_468081v1 8910 9431 Sat-CR1_GG 164 - 8910 9431 0 2 119,162, 0,359, -,-, 662439 Satellite Satellite 585 chrUn_NT_468081v1 10311 10841 Sat-CR1_GG 158 - 10311 10841 0 2 106,164, 0,366, -,-, 662443 Satellite Satellite 585 chrUn_NT_468082v1 4908 5716 GGXHOI 386 - 4908 5716 0 2 639,156, 0,652, -,-, 662447 Satellite W-chromosome 585 chrUn_NT_468082v1 5899 11478 GGXHOI 420 - 5899 11478 0 6 137,481,2676,1636,363,134, 0,184,709,3407,5061,5445, -,-,-,-,-,-, 662448 Satellite W-chromosome 585 chrUn_NT_468083v1 9309 9569 CR1-X 449 + 9309 9569 0 2 182,78, 0,182, +,+, 662455 LINE CR1 585 chrUn_NT_468084v1 3901 6015 CR1-H2 859 - 3901 6015 0 2 61,2053, 0,61, -,-, 662464 LINE CR1 585 chrUn_NT_468084v1 6013 7957 GGLTR3G1 522 + 6013 7957 0 2 588,1356, 0,588, +,+, 662465 LTR ERVL 585 chrUn_NT_468084v1 7957 11954 GGLTR7A 830 + 7957 11954 0 2 609,3388, 0,609, +,+, 662466 LTR ERV1 585 chrUn_NT_468085v1 2133 3179 (CGAGG)n 571 + 2133 3179 0 4 187,121,47,463, 0,202,509,583, +,+,+,+, 662474 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 3270 3985 (CGAGG)n 578 + 3270 3985 0 2 289,252, 0,463, +,+, 662477 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 3754 4053 (CAAGG)n 380 + 3754 4053 0 2 81,41, 0,258, +,+, 662479 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 4998 5588 (CGAGG)n 519 + 4998 5588 0 2 182,375, 0,215, +,+, 662484 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 5624 7102 (CGAGG)n 556 + 5624 7102 0 4 374,50,64,214, 0,565,794,1264, +,+,+,+, 662486 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 7620 8594 (CGAGG)n 536 + 7620 8594 0 4 244,183,268,51, 0,276,479,923, +,+,+,+, 662491 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 9084 9816 (CGAGG)n 541 + 9084 9816 0 2 254,441, 0,291, +,+, 662496 Simple_repeat Simple_repeat 585 chrUn_NT_468085v1 10410 11869 (CGAGG)n 554 + 10410 11869 0 6 191,244,25,343,57,198, 0,191,604,640,1165,1261, +,+,+,+,+,+, 662500 Simple_repeat Simple_repeat 585 chrUn_NT_468086v1 6238 6862 CR1-H 678 - 6238 6862 0 2 140,478, 0,146, -,-, 662510 LINE CR1 585 chrUn_NT_468086v1 9331 10692 CR1-H 649 - 9331 10692 0 2 117,1244, 0,117, -,-, 662514 LINE CR1 585 chrUn_NT_468087v1 1418 3125 GGXHOI 528 - 1418 3125 0 4 189,296,80,160, 0,378,1151,1547, -,-,-,-, 662517 Satellite W-chromosome 585 chrUn_NT_468087v1 3197 6479 GGXHOI 522 - 3197 6479 0 3 1137,805,550, 0,1458,2732, -,-,-, 662521 Satellite W-chromosome 585 chrUn_NT_468087v1 6551 7623 GGXHOI 462 - 6551 7623 0 2 137,734, 0,338, -,-, 662524 Satellite W-chromosome 585 chrUn_NT_468087v1 7699 8691 GGXHOI 443 - 7699 8691 0 2 788,179, 0,813, -,-, 662526 Satellite W-chromosome 585 chrUn_NT_468087v1 9338 11935 GGXHOI 481 - 9338 11935 0 5 799,493,167,70,445, 0,830,1639,1818,2152, -,-,-,-,-, 662528 Satellite W-chromosome 585 chrUn_NT_468088v1 1488 5404 GGXHOI 380 - 1488 5404 0 5 555,427,928,425,1516, 0,567,1014,1955,2400, -,-,-,-,-, 662532 Satellite W-chromosome 585 chrUn_NT_468088v1 5509 10722 GGXHOI 398 - 5509 10722 0 8 472,897,426,1368,508,286,146,935, 0,524,1434,1880,3261,3782,4117,4278, -,-,-,-,-,-,-,-, 662533 Satellite W-chromosome 585 chrUn_NT_468089v1 10553 10829 CR1-X2 395 + 10553 10829 0 2 63,213, 0,63, +,+, 662538 LINE CR1 585 chrUn_NT_468091v1 9605 11381 Sat-CR1_GG 188 + 9605 11381 0 2 641,798, 0,978, +,+, 662564 Satellite Satellite 585 chrUn_NT_468092v1 2309 5128 GGERVL-B-int 669 + 2309 5128 0 2 1909,910, 0,1909, +,+, 662573 LTR ERVL 585 chrUn_NT_468092v1 5855 7247 GGLTR7-int 340 + 5855 7247 0 3 100,206,280, 0,153,1112, +,+,+, 662575 LTR ERV1 585 chrUn_NT_468094v1 10258 11301 CR1-B2 658 + 10258 11301 0 2 242,801, 0,242, +,+, 662594 LINE CR1 585 chrUn_NT_468095v1 8500 11918 GGXHOI 480 + 8500 11918 0 7 644,138,258,248,67,430,363, 0,665,816,1786,2067,2391,3055, +,+,+,+,+,+,+, 662599 Satellite W-chromosome 585 chrUn_NT_468096v1 10108 11921 GGLTR7-int 558 + 10108 11921 0 4 1043,82,347,253, 0,1107,1213,1560, +,+,+,+, 662607 LTR ERV1 585 chrUn_NT_468097v1 809 898 (C)n 884 + 809 898 0 2 28,19, 0,70, +,+, 662610 Simple_repeat Simple_repeat 585 chrUn_NT_468097v1 6965 7024 (GGACGA)n 408 + 6965 7024 0 2 8,8, 0,51, +,+, 662623 Simple_repeat Simple_repeat 585 chrUn_NT_468098v1 3225 4989 GGERVL-A-int 671 + 3225 4989 0 2 445,1319, 0,445, +,+, 662630 LTR ERVL 585 chrUn_NT_468099v1 67 544 (CAAGG)n 456 + 67 544 0 2 203,238, 0,239, +,+, 662636 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 727 1329 (CCTTG)n 527 + 727 1329 0 2 224,352, 0,250, +,+, 662639 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 1952 2370 (CAAGG)n 535 + 1952 2370 0 3 46,31,177, 0,188,241, +,+,+, 662645 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 2414 3314 (CCTTG)n 520 + 2414 3314 0 2 133,750, 0,150, +,+, 662647 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 3735 4268 (CAAGG)n 589 + 3735 4268 0 3 46,222,240, 0,46,293, +,+,+, 662651 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 5159 5976 (CCTTG)n 499 + 5159 5976 0 3 225,129,196, 0,249,621, +,+,+, 662654 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 6382 6850 (CAAGG)n 593 + 6382 6850 0 3 46,223,173, 0,46,295, +,+,+, 662658 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 6849 7250 (CCTTG)n 561 + 6849 7250 0 2 206,195, 0,206, +,+, 662659 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 8169 8705 (CAAGG)n 591 + 8169 8705 0 3 46,223,242, 0,46,294, +,+,+, 662665 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 10019 10493 (CCTTG)n 451 + 10019 10493 0 2 258,216, 0,258, +,+, 662669 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 10912 11383 (CAAGG)n 586 + 10912 11383 0 3 46,223,176, 0,46,295, +,+,+, 662673 Simple_repeat Simple_repeat 585 chrUn_NT_468099v1 11382 11894 (CCTTG)n 564 + 11382 11894 0 3 135,170,45, 0,135,467, +,+,+, 662674 Simple_repeat Simple_repeat 585 chrUn_NT_468101v1 10555 11817 GGLTR7-int 319 - 10555 11817 0 2 279,229, 0,1033, -,-, 662691 LTR ERV1 585 chrUn_NT_468104v1 1700 2206 A-rich 595 + 1700 2206 0 2 433,38, 0,468, +,+, 662708 Low_complexity Low_complexity 585 chrUn_NT_468104v1 4710 4799 A-rich 292 + 4710 4799 0 2 21,33, 0,56, +,+, 662718 Low_complexity Low_complexity 585 chrUn_NT_468105v1 1285 11864 GGXHOI 378 - 1285 11864 0 10 162,4748,470,177,2216,934,325,152,139,910, 0,178,4986,5502,5698,7967,8928,9310,9497,9669, -,-,-,-,-,-,-,-,-,-, 662746 Satellite W-chromosome 585 chrUn_NT_468106v1 5807 11906 GGXHOI 372 + 5807 11906 0 6 1546,989,731,854,1133,683, 0,1569,2606,3354,4243,5416, +,+,+,+,+,+, 662748 Satellite W-chromosome 585 chrUn_NT_468108v1 9588 11909 GGXHOI 390 + 9588 11909 0 3 1163,977,121, 0,1192,2200, +,+,+, 662773 Satellite W-chromosome 585 chrUn_NT_468109v1 9605 10117 CR1-B2 696 + 9605 10117 0 2 260,229, 0,283, +,+, 662787 LINE CR1 585 chrUn_NT_468110v1 3876 5120 CR1-H 509 - 3876 5120 0 2 116,1128, 0,116, -,-, 662793 LINE CR1 585 chrUn_NT_468112v1 6076 8919 GGERVL-B-int 639 - 6076 8919 0 2 942,1900, 0,943, -,-, 662810 LTR ERVL 585 chrUn_NT_468112v1 11433 11815 (CAAGG)n 576 + 11433 11815 0 2 181,184, 0,198, +,+, 662815 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 1304 3556 GGLTR10D-int 795 - 1304 3556 0 2 370,1875, 0,377, -,-, 662818 LTR ERVK 585 chrUn_NT_468113v1 4157 5809 (CGAGG)n 526 + 4157 5809 0 5 212,148,404,175,442, 0,253,578,1023,1210, +,+,+,+,+, 662822 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 6834 7400 (CGAGG)n 509 + 6834 7400 0 2 363,184, 0,382, +,+, 662830 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 7499 8366 (CGAGG)n 519 + 7499 8366 0 2 519,315, 0,552, +,+, 662831 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 8548 9382 (CGAGG)n 472 + 8548 9382 0 2 193,592, 0,242, +,+, 662833 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 9495 10086 (CGAGG)n 510 + 9495 10086 0 2 180,393, 0,198, +,+, 662835 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 10275 10815 (CGAGG)n 526 + 10275 10815 0 2 177,300, 0,240, +,+, 662840 Simple_repeat Simple_repeat 585 chrUn_NT_468113v1 10855 11165 (CGAGG)n 492 + 10855 11165 0 2 102,34, 0,276, +,+, 662842 Simple_repeat Simple_repeat 585 chrUn_NT_468115v1 2215 2656 GGXHOI 391 - 2215 2656 0 2 167,226, 0,215, -,-, 662855 Satellite W-chromosome 585 chrUn_NT_468115v1 3159 3680 GGXHOI 441 - 3159 3680 0 3 141,99,255, 0,156,266, -,-,-, 662857 Satellite W-chromosome 585 chrUn_NT_468115v1 3858 4501 GGXHOI 421 - 3858 4501 0 3 238,211,132, 0,281,511, -,-,-, 662858 Satellite W-chromosome 585 chrUn_NT_468115v1 4578 5989 GGXHOI 321 - 4578 5989 0 3 660,126,552, 0,685,859, -,-,-, 662859 Satellite W-chromosome 585 chrUn_NT_468115v1 6056 6451 GGXHOI 321 - 6056 6451 0 2 159,219, 0,176, -,-, 662860 Satellite W-chromosome 585 chrUn_NT_468115v1 6648 7575 GGXHOI 301 - 6648 7575 0 3 464,128,253, 0,503,674, -,-,-, 662861 Satellite W-chromosome 585 chrUn_NT_468115v1 7890 8433 GGXHOI 355 - 7890 8433 0 2 138,360, 0,183, -,-, 662863 Satellite W-chromosome 585 chrUn_NT_468115v1 8721 9040 GGXHOI 329 - 8721 9040 0 2 104,156, 0,163, -,-, 662865 Satellite W-chromosome 585 chrUn_NT_468115v1 9685 11532 GGXHOI 372 - 9685 11532 0 6 457,458,468,132,53,129, 0,501,1004,1504,1652,1718, -,-,-,-,-,-, 662867 Satellite W-chromosome 585 chrUn_NT_468116v1 8976 11804 GGERVL-A-int 650 + 8976 11804 0 4 538,1251,183,633, 0,538,2012,2195, +,+,+,+, 662879 LTR ERVL 585 chrUn_NT_468117v1 355 3009 GGERVL-B-int 607 - 355 3009 0 2 745,1846, 0,808, -,-, 662883 LTR ERVL 585 chrUn_NT_468117v1 5358 6406 GGLTR7A 784 - 5358 6406 0 2 585,462, 0,586, -,-, 662887 LTR ERV1 585 chrUn_NT_468117v1 6933 7360 GGLTR7A 868 - 6933 7360 0 2 253,174, 0,253, -,-, 662889 LTR ERV1 585 chrUn_NT_468117v1 8853 9235 (CAAGG)n 628 + 8853 9235 0 2 111,98, 0,284, +,+, 662898 Simple_repeat Simple_repeat 585 chrUn_NT_468117v1 9255 10284 CR1-F0 845 + 9255 10284 0 2 602,427, 0,602, +,+, 662900 LINE CR1 585 chrUn_NT_468118v1 5381 7706 GGXHOI 497 - 5381 7706 0 4 857,110,883,173, 0,890,1013,2152, -,-,-,-, 662909 Satellite W-chromosome 585 chrUn_NT_468118v1 11107 11892 GGXHOI 454 - 11107 11892 0 2 349,390, 0,395, -,-, 662915 Satellite W-chromosome 585 chrUn_NT_468121v1 826 2522 GGXHOI 406 - 826 2522 0 5 152,146,489,138,697, 0,170,329,832,999, -,-,-,-,-, 662929 Satellite W-chromosome 585 chrUn_NT_468121v1 2609 4099 GGXHOI 424 - 2609 4099 0 5 387,393,311,163,143, 0,401,834,1160,1347, -,-,-,-,-, 662930 Satellite W-chromosome 585 chrUn_NT_468121v1 4170 6038 GGXHOI 479 - 4170 6038 0 5 829,403,177,232,134, 0,840,1277,1471,1734, -,-,-,-,-, 662931 Satellite W-chromosome 585 chrUn_NT_468121v1 6123 7164 GGXHOI 333 - 6123 7164 0 6 159,129,214,130,119,129, 0,205,355,625,766,912, -,-,-,-,-,-, 662932 Satellite W-chromosome 585 chrUn_NT_468121v1 7241 7563 GGXHOI 475 - 7241 7563 0 2 156,126, 0,196, -,-, 662933 Satellite W-chromosome 585 chrUn_NT_468121v1 7883 8643 GGXHOI 438 - 7883 8643 0 2 330,384, 0,376, -,-, 662935 Satellite W-chromosome 585 chrUn_NT_468121v1 8732 11002 GGXHOI 410 - 8732 11002 0 8 165,276,129,140,448,623,120,136, 0,208,518,661,855,1343,2000,2134, -,-,-,-,-,-,-,-, 662936 Satellite W-chromosome 585 chrUn_NT_468122v1 108 3045 Sat-CR1_GG 184 - 108 3045 0 2 708,1564, 0,1373, -,-, 662939 Satellite Satellite 585 chrUn_NT_468122v1 4554 10159 GGXHOI 554 - 4554 10159 0 3 78,168,1526, 0,3417,4079, -,-,-, 662943 Satellite W-chromosome 585 chrUn_NT_468122v1 10245 11887 GGXHOI 556 - 10245 11887 0 3 239,327,203, 0,739,1439, -,-,-, 662947 Satellite W-chromosome 585 chrUn_NT_468123v1 1706 2356 GGXHOI 554 + 1706 2356 0 2 322,126, 0,524, +,+, 662952 Satellite W-chromosome 585 chrUn_NT_468123v1 2431 3471 GGXHOI 586 + 2431 3471 0 3 207,194,18, 0,518,1022, +,+,+, 662954 Satellite W-chromosome 585 chrUn_NT_468123v1 3548 9890 GGXHOI 566 + 3548 9890 0 12 212,194,197,194,299,194,299,111,297,194,309,193, 0,521,1038,1648,2165,2775,3292,3984,4416,5025,5530,6149, +,+,+,+,+,+,+,+,+,+,+,+, 662957 Satellite W-chromosome 585 chrUn_NT_468123v1 10297 11302 GGXHOI 502 + 10297 11302 0 3 204,316,151, 0,500,854, +,+,+, 662970 Satellite W-chromosome 585 chrUn_NT_468124v1 281 3113 CR1-H 373 + 281 3113 0 3 207,209,378, 0,2209,2454, +,+,+, 662974 LINE CR1 585 chrUn_NT_468124v1 4993 5616 CR1-H 374 + 4993 5616 0 2 209,378, 0,245, +,+, 662978 LINE CR1 585 chrUn_NT_468124v1 7496 8119 CR1-H 377 + 7496 8119 0 2 209,378, 0,245, +,+, 662981 LINE CR1 585 chrUn_NT_468124v1 9987 10608 CR1-H 381 + 9987 10608 0 2 205,380, 0,241, +,+, 662984 LINE CR1 585 chrUn_NT_468125v1 710 1268 (CGAGG)n 579 + 710 1268 0 3 147,180,184, 0,173,374, +,+,+, 662988 Simple_repeat Simple_repeat 585 chrUn_NT_468125v1 1541 4307 GGERVL-B-int 729 + 1541 4307 0 3 249,77,2394, 0,295,372, +,+,+, 662990 LTR ERVL 585 chrUn_NT_468125v1 4390 4633 (CTCTATGGGG)n 448 - 4390 4633 0 2 82,51, 0,192, -,-, 662992 Satellite Satellite 585 chrUn_NT_468125v1 5026 5392 GGLTR7B 305 + 5026 5392 0 2 105,259, 0,107, +,+, 662994 LTR ERV1 585 chrUn_NT_468126v1 6694 7706 GGXHOI 369 - 6694 7706 0 2 522,468, 0,544, -,-, 663009 Satellite W-chromosome 585 chrUn_NT_468126v1 10439 11657 GGXHOI 364 - 10439 11657 0 2 718,477, 0,741, -,-, 663014 Satellite W-chromosome 585 chrUn_NT_468127v1 2558 4202 GGXHOI 413 - 2558 4202 0 3 645,359,605, 0,660,1039, -,-,-, 663018 Satellite W-chromosome 585 chrUn_NT_468127v1 4426 6993 GGXHOI 391 - 4426 6993 0 5 357,358,438,1191,152, 0,372,750,1207,2415, -,-,-,-,-, 663019 Satellite W-chromosome 585 chrUn_NT_468127v1 7182 8572 GGXHOI 384 - 7182 8572 0 3 276,350,730, 0,291,660, -,-,-, 663020 Satellite W-chromosome 585 chrUn_NT_468127v1 9014 11370 GGXHOI 401 - 9014 11370 0 4 865,176,394,865, 0,882,1077,1491, -,-,-,-, 663022 Satellite W-chromosome 585 chrUn_NT_468127v1 11500 11887 GGXHOI 421 - 11500 11887 0 2 149,219, 0,168, -,-, 663023 Satellite W-chromosome 585 chrUn_NT_468130v1 3878 4126 GA-rich 278 + 3878 4126 0 2 91,95, 0,153, +,+, 663043 Low_complexity Low_complexity 585 chrUn_NT_468131v1 5907 7067 CR1-F 802 + 5907 7067 0 2 342,292, 0,868, +,+, 663061 LINE CR1 585 chrUn_NT_468131v1 11519 11871 GGLTR11 606 + 11519 11871 0 2 269,49, 0,303, +,+, 663065 LTR ERV1 585 chrUn_NT_468132v1 670 1292 CR1-H 379 - 670 1292 0 2 377,209, 0,413, -,-, 663067 LINE CR1 585 chrUn_NT_468132v1 1310 2432 CR1-C2 580 + 1310 2432 0 2 133,80, 0,1042, +,+, 663068 LINE CR1 585 chrUn_NT_468132v1 5352 6604 Char12Mar1_GG 590 - 5352 6604 0 2 121,580, 0,672, -,-, 663072 DNA hAT-Charlie 585 chrUn_NT_468132v1 9490 10317 CR1-C2 669 + 9490 10317 0 2 126,85, 0,742, +,+, 663076 LINE CR1 585 chrUn_NT_468135v1 8983 11874 GGLTR7-int 761 + 8983 11874 0 2 52,863, 0,2028, +,+, 663127 LTR ERV1 585 chrUn_NT_468137v1 6066 7347 GGXHOI 426 - 6066 7347 0 3 458,273,484, 0,499,797, -,-,-, 663139 Satellite W-chromosome 585 chrUn_NT_468139v1 1882 4187 ENS3-int 934 - 1882 4187 0 3 931,881,493, 0,931,1812, -,-,-, 663169 LTR ERVL 585 chrUn_NT_468139v1 4184 6488 ENS3-int 939 - 4184 6488 0 3 931,882,491, 0,931,1813, -,-,-, 663170 LTR ERVL 585 chrUn_NT_468139v1 6485 8786 ENS3-int 937 - 6485 8786 0 3 930,880,491, 0,930,1810, -,-,-, 663171 LTR ERVL 585 chrUn_NT_468139v1 8783 11084 ENS3-int 931 - 8783 11084 0 3 929,882,490, 0,929,1811, -,-,-, 663172 LTR ERVL 585 chrUn_NT_468141v1 3556 7441 GGXHOI 405 - 3556 7441 0 9 511,448,98,210,498,602,648,473,175, 0,528,995,1112,1336,1879,2496,3182,3710, -,-,-,-,-,-,-,-,-, 663189 Satellite W-chromosome 585 chrUn_NT_468141v1 7520 8084 GGXHOI 344 - 7520 8084 0 2 263,282, 0,282, -,-, 663190 Satellite W-chromosome 585 chrUn_NT_468141v1 10806 11627 GGXHOI 388 - 10806 11627 0 3 144,153,404, 0,203,417, -,-,-, 663196 Satellite W-chromosome 585 chrUn_NT_468143v1 9026 9973 (CCCCATTGGG)n 563 + 9026 9973 0 3 343,233,80, 0,394,867, +,+,+, 663208 Satellite Satellite 585 chrUn_NT_468143v1 10888 11250 (ACCCATAGAG)n 586 + 10888 11250 0 2 89,23, 0,339, +,+, 663215 Satellite Satellite 585 chrUn_NT_468143v1 10977 11227 (ACCCCATAGGG)n 536 + 10977 11227 0 2 92,35, 0,215, +,+, 663216 Satellite Satellite 585 chrUn_NT_468144v1 10440 10511 (GTCCCCT)n 286 + 10440 10511 0 2 10,14, 0,57, +,+, 663234 Simple_repeat Simple_repeat 585 chrUn_NT_468145v1 2124 2740 CR1-H 628 - 2124 2740 0 2 138,472, 0,144, -,-, 663239 LINE CR1 585 chrUn_NT_468145v1 5632 6074 CR1-H 644 - 5632 6074 0 2 154,288, 0,154, -,-, 663243 LINE CR1 585 chrUn_NT_468148v1 7902 8205 (ACCCCATAGGG)n 377 - 7902 8205 0 2 141,106, 0,197, -,-, 663276 Satellite Satellite 585 chrUn_NT_468149v1 707 8501 GGXHOI 546 - 707 8501 0 14 522,302,184,267,194,206,194,330,194,299,194,197,37,205, 0,832,1458,1994,2585,3192,3710,4184,4836,5341,5963,6570,7246,7589, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 663280 Satellite W-chromosome 585 chrUn_NT_468149v1 8571 9592 GGXHOI 504 - 8571 9592 0 3 17,217,152, 0,306,869, -,-,-, 663294 Satellite W-chromosome 585 chrUn_NT_468149v1 9658 10675 GGXHOI 530 - 9658 10675 0 2 626,208, 0,809, -,-, 663297 Satellite W-chromosome 585 chrUn_NT_468149v1 10975 11598 GGXHOI 529 - 10975 11598 0 3 59,99,211, 0,90,412, -,-,-, 663300 Satellite W-chromosome 585 chrUn_NT_468151v1 1181 2058 GGXHOI 304 - 1181 2058 0 2 266,594, 0,283, -,-, 663310 Satellite W-chromosome 585 chrUn_NT_468151v1 2280 4715 GGXHOI 338 - 2280 4715 0 3 843,265,1249, 0,905,1186, -,-,-, 663311 Satellite W-chromosome 585 chrUn_NT_468151v1 5039 6168 GGXHOI 333 - 5039 6168 0 2 668,398, 0,731, -,-, 663313 Satellite W-chromosome 585 chrUn_NT_468151v1 6408 7528 GGXHOI 292 - 6408 7528 0 2 255,848, 0,272, -,-, 663314 Satellite W-chromosome 585 chrUn_NT_468151v1 7696 9348 GGXHOI 344 - 7696 9348 0 3 749,261,566, 0,809,1086, -,-,-, 663315 Satellite W-chromosome 585 chrUn_NT_468151v1 10161 11818 GGXHOI 340 - 10161 11818 0 4 259,432,475,381, 0,276,746,1276, -,-,-,-, 663317 Satellite W-chromosome 585 chrUn_NT_468152v1 509 1414 GGXHOI 371 - 509 1414 0 2 446,417, 0,488, -,-, 663319 Satellite W-chromosome 585 chrUn_NT_468152v1 1581 2900 GGXHOI 368 - 1581 2900 0 3 360,446,411, 0,419,908, -,-,-, 663320 Satellite W-chromosome 585 chrUn_NT_468152v1 4349 6333 GGXHOI 410 - 4349 6333 0 5 100,355,403,524,440, 0,127,539,1000,1544, -,-,-,-,-, 663324 Satellite W-chromosome 585 chrUn_NT_468152v1 9144 9935 GGXHOI 381 - 9144 9935 0 2 438,290, 0,501, -,-, 663331 Satellite W-chromosome 585 chrUn_NT_468153v1 1148 7691 GGXHOI 376 - 1148 7691 0 6 201,1608,126,2603,1702,118, 0,217,1866,2007,4672,6425, -,-,-,-,-,-, 663336 Satellite W-chromosome 585 chrUn_NT_468153v1 9459 11838 GGXHOI 385 - 9459 11838 0 3 1464,160,717, 0,1480,1662, -,-,-, 663338 Satellite W-chromosome 585 chrUn_NT_468154v1 579 2014 (CGAGG)n 529 + 579 2014 0 3 773,86,363, 0,808,1072, +,+,+, 663342 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 2061 2992 (CGAGG)n 534 + 2061 2992 0 2 236,516, 0,415, +,+, 663345 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 3470 5157 (CGAGG)n 536 + 3470 5157 0 5 378,654,177,179,185, 0,389,1075,1304,1502, +,+,+,+,+, 663350 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 5423 6406 (GGCGA)n 324 + 5423 6406 0 2 468,479, 0,504, +,+, 663353 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 6417 8675 (CGAGG)n 537 + 6417 8675 0 7 178,237,9,130,274,96,486, 0,239,774,1038,1181,1646,1772, +,+,+,+,+,+,+, 663355 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 9101 9507 (CGAGG)n 579 + 9101 9507 0 2 211,179, 0,227, +,+, 663364 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 9727 10304 (CGAGG)n 568 + 9727 10304 0 2 182,369, 0,208, +,+, 663367 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 10316 11259 (CGAGG)n 585 + 10316 11259 0 4 309,223,198,213, 0,309,532,730, +,+,+,+, 663369 Simple_repeat Simple_repeat 585 chrUn_NT_468154v1 11350 11845 (CGAGG)n 553 + 11350 11845 0 2 185,250, 0,245, +,+, 663371 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 1385 1780 (CGAGG)n 483 + 1385 1780 0 2 182,186, 0,209, +,+, 663374 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 1789 1948 (GGCGG)n 224 + 1789 1948 0 2 68,55, 0,104, +,+, 663375 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 2809 3380 (CGAGG)n 436 + 2809 3380 0 2 184,339, 0,232, +,+, 663379 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 4693 5236 (CGAGG)n 500 + 4693 5236 0 3 167,117,67, 0,182,476, +,+,+, 663384 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 6474 7062 (CGAGG)n 399 + 6474 7062 0 3 32,181,340, 0,53,248, +,+,+, 663389 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 7128 7494 (CGAGG)n 510 + 7128 7494 0 2 178,172, 0,194, +,+, 663391 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 8746 9211 (CGAGG)n 520 + 8746 9211 0 2 100,54, 0,411, +,+, 663395 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 9769 10149 (CGAGG)n 495 + 9769 10149 0 2 178,176, 0,204, +,+, 663400 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 10225 10726 (CGAGG)n 496 + 10225 10726 0 2 311,174, 0,327, +,+, 663401 Simple_repeat Simple_repeat 585 chrUn_NT_468155v1 11383 11761 (CGAGG)n 533 + 11383 11761 0 2 181,177, 0,201, +,+, 663404 Simple_repeat Simple_repeat 585 chrUn_NT_468156v1 1077 1365 (CCCCATTGGG)n 405 - 1077 1365 0 2 116,114, 0,174, -,-, 663408 Satellite Satellite 585 chrUn_NT_468157v1 898 1504 GGXHOI 316 - 898 1504 0 2 439,146, 0,460, -,-, 663418 Satellite W-chromosome 585 chrUn_NT_468157v1 5142 5777 GGXHOI 388 - 5142 5777 0 2 250,362, 0,273, -,-, 663423 Satellite W-chromosome 585 chrUn_NT_468157v1 5861 8728 GGXHOI 397 - 5861 8728 0 2 2243,608, 0,2259, -,-, 663424 Satellite W-chromosome 585 chrUn_NT_468157v1 8808 11844 GGXHOI 393 - 8808 11844 0 4 611,219,1172,945, 0,666,903,2091, -,-,-,-, 663425 Satellite W-chromosome 585 chrUn_NT_468159v1 416 2041 GGXHOI 392 + 416 2041 0 2 1046,516, 0,1109, +,+, 663439 Satellite W-chromosome 585 chrUn_NT_468159v1 2140 3191 GGXHOI 392 + 2140 3191 0 2 472,516, 0,535, +,+, 663440 Satellite W-chromosome 585 chrUn_NT_468159v1 3290 4341 GGXHOI 392 + 3290 4341 0 2 472,516, 0,535, +,+, 663441 Satellite W-chromosome 585 chrUn_NT_468159v1 4440 5487 GGXHOI 386 + 4440 5487 0 2 472,514, 0,533, +,+, 663442 Satellite W-chromosome 585 chrUn_NT_468159v1 10004 11345 GGXHOI 388 + 10004 11345 0 2 470,808, 0,533, +,+, 663448 Satellite W-chromosome 585 chrUn_NT_468161v1 638 4572 GGXHOI 386 + 638 4572 0 4 62,490,3097,218, 0,79,589,3716, +,+,+,+, 663463 Satellite W-chromosome 585 chrUn_NT_468161v1 5761 7518 GGXHOI 373 + 5761 7518 0 2 491,1248, 0,509, +,+, 663465 Satellite W-chromosome 585 chrUn_NT_468161v1 7846 11835 GGXHOI 378 + 7846 11835 0 4 1518,773,1504,125, 0,1530,2324,3864, +,+,+,+, 663466 Satellite W-chromosome 585 chrUn_NT_468162v1 1302 1924 CR1-H 681 - 1302 1924 0 2 139,477, 0,145, -,-, 663468 LINE CR1 585 chrUn_NT_468162v1 4720 5167 CR1-H 646 - 4720 5167 0 2 157,290, 0,157, -,-, 663472 LINE CR1 585 chrUn_NT_468163v1 925 6367 GGXHOI 405 + 925 6367 0 4 444,1984,1933,1028, 0,460,2461,4414, +,+,+,+, 663480 Satellite W-chromosome 585 chrUn_NT_468163v1 6893 8265 GGXHOI 374 + 6893 8265 0 2 940,416, 0,956, +,+, 663482 Satellite W-chromosome 585 chrUn_NT_468163v1 8411 9820 GGXHOI 349 + 8411 9820 0 3 297,526,545, 0,318,864, +,+,+, 663483 Satellite W-chromosome 585 chrUn_NT_468163v1 10326 11834 GGXHOI 409 + 10326 11834 0 3 150,475,822, 0,170,686, +,+,+, 663485 Satellite W-chromosome 585 chrUn_NT_468168v1 7586 9073 GGXHOI 405 - 7586 9073 0 3 584,397,461, 0,603,1026, -,-,-, 663521 Satellite W-chromosome 585 chrUn_NT_468168v1 10220 11823 GGXHOI 408 - 10220 11823 0 5 91,963,131,185,167, 0,107,1089,1239,1436, -,-,-,-,-, 663524 Satellite W-chromosome 585 chrUn_NT_468169v1 7763 10988 GGXHOI 395 - 7763 10988 0 4 816,230,821,1273, 0,830,1117,1952, -,-,-,-, 663526 Satellite W-chromosome 585 chrUn_NT_468170v1 7755 10265 GGXHOI 559 - 7755 10265 0 2 1848,619, 0,1891, -,-, 663537 Satellite W-chromosome 585 chrUn_NT_468170v1 10283 11423 GGXHOI 548 - 10283 11423 0 2 186,382, 0,758, -,-, 663539 Satellite W-chromosome 585 chrUn_NT_468171v1 2741 3974 GGLTR7-int 319 + 2741 3974 0 2 206,250, 0,983, +,+, 663545 LTR ERV1 585 chrUn_NT_468172v1 2099 2648 CR1-X 359 + 2099 2648 0 3 159,123,225, 0,160,324, +,+,+, 663556 LINE CR1 585 chrUn_NT_468175v1 1353 9059 GGXHOI 433 - 1353 9059 0 3 3504,1261,2881, 0,3545,4825, -,-,-, 663584 Satellite W-chromosome 585 chrUn_NT_468175v1 9160 10198 GGXHOI 394 - 9160 10198 0 2 325,694, 0,344, -,-, 663585 Satellite W-chromosome 585 chrUn_NT_468178v1 8553 9099 GGXHOI 327 - 8553 9099 0 2 156,367, 0,179, -,-, 663651 Satellite W-chromosome 585 chrUn_NT_468178v1 9166 11805 GGXHOI 399 - 9166 11805 0 4 676,1135,391,380, 0,696,1851,2259, -,-,-,-, 663652 Satellite W-chromosome 585 chrUn_NT_468179v1 2679 3343 GGXHOI 306 - 2679 3343 0 3 246,215,173, 0,257,491, -,-,-, 663654 Satellite W-chromosome 585 chrUn_NT_468179v1 3894 6362 GGXHOI 381 - 3894 6362 0 6 725,307,307,649,233,148, 0,749,1079,1402,2066,2320, -,-,-,-,-,-, 663656 Satellite W-chromosome 585 chrUn_NT_468179v1 6457 8536 GGXHOI 389 - 6457 8536 0 3 1651,212,186, 0,1667,1893, -,-,-, 663657 Satellite W-chromosome 585 chrUn_NT_468179v1 8635 10384 GGXHOI 404 - 8635 10384 0 5 259,257,106,836,223, 0,276,546,674,1526, -,-,-,-,-, 663658 Satellite W-chromosome 585 chrUn_NT_468179v1 10483 11811 GGXHOI 352 - 10483 11811 0 2 532,782, 0,546, -,-, 663659 Satellite W-chromosome 585 chrUn_NT_468180v1 1562 7193 GGXHOI 393 + 1562 7193 0 3 719,4671,191, 0,733,5440, +,+,+, 663663 Satellite W-chromosome 585 chrUn_NT_468180v1 7342 9996 GGXHOI 388 + 7342 9996 0 2 1836,793, 0,1861, +,+, 663664 Satellite W-chromosome 585 chrUn_NT_468180v1 10873 11844 GGXHOI 371 + 10873 11844 0 3 138,594,180, 0,149,791, +,+,+, 663667 Satellite W-chromosome 585 chrUn_NT_468181v1 9244 11748 GGXHOI 365 - 9244 11748 0 3 930,1155,366, 0,945,2138, -,-,-, 663676 Satellite W-chromosome 585 chrUn_NT_468182v1 5259 10906 GGXHOI 341 - 5259 10906 0 10 219,714,367,1138,356,229,140,866,458,917, 0,241,972,1369,2523,2895,3165,3340,4223,4730, -,-,-,-,-,-,-,-,-,-, 663678 Satellite W-chromosome 585 chrUn_NT_468184v1 8541 8922 G-rich 120 + 8541 8922 0 2 144,210, 0,171, +,+, 663752 Low_complexity Low_complexity 585 chrUn_NT_468184v1 9844 9997 GA-rich 332 + 9844 9997 0 2 87,18, 0,135, +,+, 663756 Low_complexity Low_complexity 585 chrUn_NT_468185v1 9913 11732 GGXHOI 401 - 9913 11732 0 3 521,178,1066, 0,543,753, -,-,-, 663765 Satellite W-chromosome 585 chrUn_NT_468186v1 9883 11348 GGLTR7B 557 + 9883 11348 0 2 883,124, 0,1341, +,+, 663786 LTR ERV1 585 chrUn_NT_468188v1 6162 7710 GGXHOI 395 - 6162 7710 0 2 1182,348, 0,1200, -,-, 663803 Satellite W-chromosome 585 chrUn_NT_468188v1 7779 10571 GGXHOI 384 - 7779 10571 0 6 135,261,833,1069,186,155, 0,151,424,1313,2433,2637, -,-,-,-,-,-, 663804 Satellite W-chromosome 585 chrUn_NT_468190v1 583 2119 GGXHOI 346 + 583 2119 0 3 809,431,229, 0,826,1307, +,+,+, 663809 Satellite W-chromosome 585 chrUn_NT_468190v1 3130 11586 GGXHOI 390 + 3130 11586 0 8 681,976,708,1144,1010,978,1970,837, 0,701,1701,2440,3601,4631,5629,7619, +,+,+,+,+,+,+,+, 663811 Satellite W-chromosome 585 chrUn_NT_468191v1 2640 6349 GGXHOI 403 + 2640 6349 0 2 2091,1585, 0,2124, +,+, 663815 Satellite W-chromosome 585 chrUn_NT_468191v1 9074 11308 GGXHOI 388 + 9074 11308 0 2 2094,129, 0,2105, +,+, 663818 Satellite W-chromosome 585 chrUn_NT_468192v1 1418 9306 GGXHOI 374 + 1418 9306 0 9 1087,505,313,207,1033,509,2902,150,947, 0,1105,1639,1970,2221,3280,3814,6731,6941, +,+,+,+,+,+,+,+,+, 663821 Satellite W-chromosome 585 chrUn_NT_468192v1 9427 11778 GGXHOI 359 + 9427 11778 0 3 157,394,1772, 0,173,579, +,+,+, 663822 Satellite W-chromosome 585 chrUn_NT_468193v1 4475 4752 (ACCCCATAGGG)n 437 - 4475 4752 0 2 120,121, 0,156, -,-, 663830 Satellite Satellite 585 chrUn_NT_468193v1 7850 8107 (ACCCCATAGGG)n 385 - 7850 8107 0 2 124,110, 0,147, -,-, 663841 Satellite Satellite 585 chrUn_NT_468193v1 8209 8567 (ACCCCATAGGG)n 367 - 8209 8567 0 2 129,170, 0,188, -,-, 663843 Satellite Satellite 585 chrUn_NT_468194v1 9787 10359 GGXHOI 323 - 9787 10359 0 2 259,285, 0,287, -,-, 663856 Satellite W-chromosome 585 chrUn_NT_468195v1 3751 4598 GGXHOI 351 - 3751 4598 0 3 379,222,206, 0,401,641, -,-,-, 663859 Satellite W-chromosome 585 chrUn_NT_468195v1 4735 7258 GGXHOI 401 - 4735 7258 0 5 339,593,308,986,218, 0,355,969,1301,2305, -,-,-,-,-, 663860 Satellite W-chromosome 585 chrUn_NT_468195v1 7336 8029 GGXHOI 368 - 7336 8029 0 2 453,223, 0,470, -,-, 663861 Satellite W-chromosome 585 chrUn_NT_468195v1 9000 11375 GGXHOI 387 - 9000 11375 0 4 323,147,1578,234, 0,379,547,2141, -,-,-,-, 663864 Satellite W-chromosome 585 chrUn_NT_468199v1 5848 6970 CR1-B2 712 + 5848 6970 0 2 225,894, 0,228, +,+, 663880 LINE CR1 585 chrUn_NT_468200v1 2079 2948 GGXHOI 404 - 2079 2948 0 3 321,202,242, 0,366,627, -,-,-, 663885 Satellite W-chromosome 585 chrUn_NT_468200v1 3352 3804 GGXHOI 413 - 3352 3804 0 2 147,290, 0,162, -,-, 663886 Satellite W-chromosome 585 chrUn_NT_468200v1 3889 8975 GGXHOI 416 - 3889 8975 0 6 1418,548,146,2386,146,337, 0,1476,2036,2193,4592,4749, -,-,-,-,-,-, 663887 Satellite W-chromosome 585 chrUn_NT_468200v1 9061 10055 GGXHOI 410 - 9061 10055 0 3 561,148,250, 0,581,744, -,-,-, 663888 Satellite W-chromosome 585 chrUn_NT_468200v1 10139 11137 GGXHOI 413 - 10139 11137 0 3 489,146,339, 0,502,659, -,-,-, 663889 Satellite W-chromosome 585 chrUn_NT_468202v1 731 3563 GGERVL-B-int 705 + 731 3563 0 2 1920,912, 0,1920, +,+, 663895 LTR ERVL 585 chrUn_NT_468202v1 4252 5642 GGLTR7-int 315 + 4252 5642 0 3 100,234,289, 0,126,1101, +,+,+, 663897 LTR ERV1 585 chrUn_NT_468204v1 304 9239 GGXHOI 559 - 304 9239 0 5 1392,22,51,156,807, 0,1969,5643,5737,8128, -,-,-,-,-, 663939 Satellite W-chromosome 585 chrUn_NT_468204v1 9989 11730 GGXHOI 536 - 9989 11730 0 2 332,813, 0,928, -,-, 663946 Satellite W-chromosome 585 chrUn_NT_468205v1 1616 2834 GGXHOI 372 + 1616 2834 0 2 1041,125, 0,1093, +,+, 663950 Satellite W-chromosome 585 chrUn_NT_468205v1 2953 4036 GGXHOI 350 + 2953 4036 0 3 298,589,171, 0,309,912, +,+,+, 663951 Satellite W-chromosome 585 chrUn_NT_468205v1 4104 5868 GGXHOI 328 + 4104 5868 0 6 159,265,111,166,604,230, 0,197,520,693,908,1534, +,+,+,+,+,+, 663952 Satellite W-chromosome 585 chrUn_NT_468205v1 5986 7222 GGXHOI 354 + 5986 7222 0 6 137,192,133,149,138,369, 0,162,370,523,713,867, +,+,+,+,+,+, 663953 Satellite W-chromosome 585 chrUn_NT_468205v1 7307 11788 GGXHOI 381 + 7307 11788 0 9 225,152,160,160,137,1510,546,1084,312, 0,238,420,598,773,958,2482,3070,4169, +,+,+,+,+,+,+,+,+, 663954 Satellite W-chromosome 585 chrUn_NT_468206v1 4055 5590 (CGAGG)n 467 + 4055 5590 0 5 183,443,290,357,150, 0,199,697,999,1385, +,+,+,+,+, 663968 Simple_repeat Simple_repeat 585 chrUn_NT_468206v1 5829 6414 (CGAGG)n 496 + 5829 6414 0 2 369,205, 0,380, +,+, 663970 Simple_repeat Simple_repeat 585 chrUn_NT_468206v1 7558 8355 (CGAGG)n 475 + 7558 8355 0 3 247,152,184, 0,434,613, +,+,+, 663976 Simple_repeat Simple_repeat 585 chrUn_NT_468206v1 9908 10555 (CGAGG)n 437 + 9908 10555 0 3 181,183,199, 0,209,448, +,+,+, 663984 Simple_repeat Simple_repeat 585 chrUn_NT_468207v1 2139 3782 GGXHOI 417 + 2139 3782 0 3 1313,140,148, 0,1335,1495, +,+,+, 663990 Satellite W-chromosome 585 chrUn_NT_468207v1 4689 6864 GGXHOI 438 + 4689 6864 0 3 1561,243,307, 0,1602,1868, +,+,+, 663992 Satellite W-chromosome 585 chrUn_NT_468207v1 8167 9791 GGXHOI 418 + 8167 9791 0 3 821,435,317, 0,850,1307, +,+,+, 663995 Satellite W-chromosome 585 chrUn_NT_468207v1 10730 11732 GGXHOI 423 + 10730 11732 0 2 442,505, 0,497, +,+, 663997 Satellite W-chromosome 585 chrUn_NT_468209v1 1651 2407 GGXHOI 393 - 1651 2407 0 3 310,165,255, 0,325,501, -,-,-, 664002 Satellite W-chromosome 585 chrUn_NT_468209v1 2511 3492 GGXHOI 365 - 2511 3492 0 3 240,435,269, 0,261,712, -,-,-, 664003 Satellite W-chromosome 585 chrUn_NT_468209v1 5548 11531 GGXHOI 385 - 5548 11531 0 3 300,2837,2811, 0,311,3172, -,-,-, 664005 Satellite W-chromosome 585 chrUn_NT_468210v1 1593 1835 (CTCTATGGGG)n 563 - 1593 1835 0 2 107,122, 0,120, -,-, 664014 Satellite Satellite 585 chrUn_NT_468210v1 2637 2907 (CTCTATGGGG)n 536 - 2637 2907 0 2 118,118, 0,152, -,-, 664018 Satellite Satellite 585 chrUn_NT_468210v1 3476 3697 (CTCTATGGGG)n 556 - 3476 3697 0 2 117,76, 0,145, -,-, 664020 Satellite Satellite 585 chrUn_NT_468210v1 6912 7175 (ACCCCATAGGG)n 584 + 6912 7175 0 2 82,53, 0,210, +,+, 664024 Satellite Satellite 585 chrUn_NT_468210v1 7406 7758 (ACCCCATAGGG)n 538 + 7406 7758 0 2 184,45, 0,307, +,+, 664029 Satellite Satellite 585 chrUn_NT_468210v1 7769 8014 (CTCTATGGGG)n 636 - 7769 8014 0 2 90,38, 0,207, -,-, 664031 Satellite Satellite 585 chrUn_NT_468211v1 1890 3572 GGXHOI 365 - 1890 3572 0 4 125,981,253,243, 0,165,1170,1439, -,-,-,-, 664040 Satellite W-chromosome 585 chrUn_NT_468211v1 3700 4998 GGXHOI 366 - 3700 4998 0 5 282,133,190,213,326, 0,329,505,709,972, -,-,-,-,-, 664041 Satellite W-chromosome 585 chrUn_NT_468211v1 5151 11769 GGXHOI 350 - 5151 11769 0 15 127,414,648,133,1081,306,415,438,125,141,317,140,1215,592,152, 0,143,610,1314,1482,2599,2921,3353,3807,3945,4117,4446,4626,5855,6466, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 664042 Satellite W-chromosome 585 chrUn_NT_468212v1 591 5077 GGXHOI 408 - 591 5077 0 4 384,1628,186,2236, 0,397,2041,2250, -,-,-,-, 664044 Satellite W-chromosome 585 chrUn_NT_468212v1 5247 11770 GGXHOI 333 - 5247 11770 0 8 185,153,1036,377,999,862,2623,115, 0,215,420,1471,1866,2890,3769,6408, -,-,-,-,-,-,-,-, 664045 Satellite W-chromosome 585 chrUn_NT_468213v1 672 853 (GCCCCACAGCT)n 450 - 672 853 0 2 90,31, 0,150, -,-, 664047 Satellite Satellite 585 chrUn_NT_468213v1 885 1015 (CTCTATGGGG)n 492 + 885 1015 0 2 31,31, 0,99, +,+, 664049 Satellite Satellite 585 chrUn_NT_468214v1 1860 2503 (CACTG)n 347 + 1860 2503 0 3 184,233,178, 0,184,465, +,+,+, 664069 Simple_repeat Simple_repeat 585 chrUn_NT_468214v1 2775 3214 (CACTG)n 361 + 2775 3214 0 2 179,222, 0,217, +,+, 664073 Simple_repeat Simple_repeat 585 chrUn_NT_468214v1 3695 3808 (CAGCA)n 1000 + 3695 3808 0 2 26,36, 0,77, +,+, 664076 Simple_repeat Simple_repeat 585 chrUn_NT_468214v1 4534 4656 (CAGCA)n 930 + 4534 4656 0 2 41,30, 0,92, +,+, 664081 Simple_repeat Simple_repeat 585 chrUn_NT_468214v1 8882 9160 (CTCTATGGGG)n 591 - 8882 9160 0 2 113,117, 0,161, -,-, 664083 Satellite Satellite 585 chrUn_NT_468214v1 9303 9552 (CTCTATGGGG)n 606 - 9303 9552 0 2 119,119, 0,130, -,-, 664084 Satellite Satellite 585 chrUn_NT_468215v1 4551 5823 CR1-H 594 + 4551 5823 0 2 1158,114, 0,1158, +,+, 664093 LINE CR1 585 chrUn_NT_468215v1 8015 8639 CR1-H 676 + 8015 8639 0 2 479,139, 0,485, +,+, 664096 LINE CR1 585 chrUn_NT_468216v1 6502 6648 G-rich 569 + 6502 6648 0 2 38,59, 0,87, +,+, 664101 Low_complexity Low_complexity 585 chrUn_NT_468216v1 10910 11763 GGLTR7A 827 - 10910 11763 0 3 112,256,481, 0,113,372, -,-,-, 664104 LTR ERV1 585 chrUn_NT_468217v1 5752 6431 GGXHOI 361 - 5752 6431 0 3 244,117,227, 0,292,452, -,-,-, 664109 Satellite W-chromosome 585 chrUn_NT_468217v1 6604 7424 GGXHOI 404 - 6604 7424 0 2 443,329, 0,491, -,-, 664110 Satellite W-chromosome 585 chrUn_NT_468217v1 7515 11177 GGXHOI 354 - 7515 11177 0 16 331,244,176,166,253,135,173,324,124,172,149,138,223,224,181,173, 0,343,650,871,1079,1344,1509,1703,2038,2202,2410,2576,2730,2995,3258,3489, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 664111 Satellite W-chromosome 585 chrUn_NT_468218v1 1063 3722 GGXHOI 426 - 1063 3722 0 5 649,904,146,653,217, 0,664,1580,1737,2442, -,-,-,-,-, 664114 Satellite W-chromosome 585 chrUn_NT_468218v1 3776 5778 GGXHOI 387 - 3776 5778 0 3 1009,560,378, 0,1027,1624, -,-,-, 664116 Satellite W-chromosome 585 chrUn_NT_468218v1 5863 7177 GGXHOI 435 - 5863 7177 0 3 487,146,657, 0,500,657, -,-,-, 664117 Satellite W-chromosome 585 chrUn_NT_468218v1 7271 9459 GGXHOI 422 - 7271 9459 0 3 144,1679,334, 0,160,1854, -,-,-, 664118 Satellite W-chromosome 585 chrUn_NT_468218v1 9543 11611 GGXHOI 414 - 9543 11611 0 4 487,146,975,412, 0,500,661,1656, -,-,-,-, 664119 Satellite W-chromosome 585 chrUn_NT_468222v1 3706 3971 (CAAGG)n 686 + 3706 3971 0 2 58,204, 0,61, +,+, 664143 Simple_repeat Simple_repeat 585 chrUn_NT_468222v1 5485 5992 (CAAGG)n 661 + 5485 5992 0 2 262,245, 0,262, +,+, 664153 Simple_repeat Simple_repeat 585 chrUn_NT_468222v1 6196 6771 (CAAGG)n 624 + 6196 6771 0 2 337,59, 0,516, +,+, 664155 Simple_repeat Simple_repeat 585 chrUn_NT_468225v1 2842 4219 GGXHOI 392 + 2842 4219 0 2 571,777, 0,600, +,+, 664201 Satellite W-chromosome 585 chrUn_NT_468225v1 8016 11557 GGXHOI 427 + 8016 11557 0 3 63,2757,666, 0,107,2875, +,+,+, 664204 Satellite W-chromosome 585 chrUn_NT_468226v1 4799 5073 CR1-X2 392 + 4799 5073 0 2 63,211, 0,63, +,+, 664207 LINE CR1 585 chrUn_NT_468227v1 4705 5679 (ACCCATAGGG)n 672 + 4705 5679 0 2 280,694, 0,280, +,+, 664214 Satellite Satellite 585 chrUn_NT_468227v1 5811 6356 (ACCCATAGGG)n 436 + 5811 6356 0 4 20,70,161,28, 0,148,240,517, +,+,+,+, 664216 Satellite Satellite 585 chrUn_NT_468227v1 6709 7147 (ACCCATAGGG)n 426 + 6709 7147 0 4 60,85,20,57, 0,125,339,381, +,+,+,+, 664221 Satellite Satellite 585 chrUn_NT_468227v1 7500 8089 (ACCCATAGGG)n 601 + 7500 8089 0 3 107,141,300, 0,148,289, +,+,+, 664227 Satellite Satellite 585 chrUn_NT_468227v1 8369 8968 (ACCCATAGGG)n 431 + 8369 8968 0 3 199,128,110, 0,222,489, +,+,+, 664231 Satellite Satellite 585 chrUn_NT_468227v1 9120 9558 (ACCCATAGGG)n 426 + 9120 9558 0 4 60,85,20,57, 0,125,339,381, +,+,+,+, 664235 Satellite Satellite 585 chrUn_NT_468228v1 4514 6657 GGXHOI 372 + 4514 6657 0 2 998,1082, 0,1061, +,+, 664252 Satellite W-chromosome 585 chrUn_NT_468228v1 9957 10912 GGXHOI 359 + 9957 10912 0 2 631,303, 0,652, +,+, 664256 Satellite W-chromosome 585 chrUn_NT_468229v1 4565 4858 (ACCCATAGAG)n 396 + 4565 4858 0 2 116,121, 0,172, +,+, 664270 Satellite Satellite 585 chrUn_NT_468231v1 586 847 (CTCTATGGGG)n 306 - 586 847 0 2 111,118, 0,143, -,-, 664295 Satellite Satellite 585 chrUn_NT_468231v1 2215 2469 (CTCTATGGGG)n 257 - 2215 2469 0 2 111,121, 0,133, -,-, 664305 Satellite Satellite 585 chrUn_NT_468231v1 3322 3554 (CTCTATGGGG)n 290 - 3322 3554 0 2 107,111, 0,121, -,-, 664313 Satellite Satellite 585 chrUn_NT_468232v1 5646 6782 CR1-B2 675 - 5646 6782 0 2 906,227, 0,909, -,-, 664335 LINE CR1 585 chrUn_NT_468233v1 110 965 (CAAGG)n 473 + 110 965 0 3 193,373,229, 0,236,626, +,+,+, 664340 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 1033 1809 (CCTTG)n 507 + 1033 1809 0 4 58,173,245,224, 0,82,278,552, +,+,+,+, 664341 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 2132 2554 (CCTTG)n 477 + 2132 2554 0 2 173,223, 0,199, +,+, 664344 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 3233 3923 (CAAGG)n 538 + 3233 3923 0 3 242,118,151, 0,421,539, +,+,+, 664350 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 3922 4343 (CCTTG)n 488 + 3922 4343 0 2 174,221, 0,200, +,+, 664353 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 4763 5577 (CAAGG)n 483 + 4763 5577 0 3 194,368,178, 0,242,636, +,+,+, 664357 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 5803 6537 (CCTTG)n 516 + 5803 6537 0 2 505,223, 0,511, +,+, 664360 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 6789 7277 (CCTTG)n 477 + 6789 7277 0 2 242,224, 0,264, +,+, 664362 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 8029 8610 (CAAGG)n 519 + 8029 8610 0 3 185,201,195, 0,185,386, +,+,+, 664368 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 8635 9056 (CCTTG)n 482 + 8635 9056 0 2 173,223, 0,198, +,+, 664369 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 9720 10338 (CAAGG)n 548 + 9720 10338 0 2 374,220, 0,398, +,+, 664376 Simple_repeat Simple_repeat 585 chrUn_NT_468233v1 10361 11255 (CCTTG)n 486 + 10361 11255 0 2 690,204, 0,690, +,+, 664377 Simple_repeat Simple_repeat 585 chrUn_NT_468234v1 972 3108 GGXHOI 438 + 972 3108 0 2 1217,897, 0,1239, +,+, 664380 Satellite W-chromosome 585 chrUn_NT_468234v1 3191 11736 GGXHOI 461 + 3191 11736 0 9 166,231,2143,1632,1833,830,1005,354,138, 0,183,430,2590,4280,6163,7010,8026,8407, +,+,+,+,+,+,+,+,+, 664381 Satellite W-chromosome 585 chrUn_NT_468236v1 1166 1734 CR1-X 461 + 1166 1734 0 3 173,132,221, 0,173,347, +,+,+, 664386 LINE CR1 585 chrUn_NT_468238v1 1123 8447 GGXHOI 385 - 1123 8447 0 10 265,547,223,2093,1024,339,146,1980,411,128, 0,293,857,1100,3211,4248,4602,4773,6770,7196, -,-,-,-,-,-,-,-,-,-, 664405 Satellite W-chromosome 585 chrUn_NT_468239v1 2519 3563 CR1-F0 883 - 2519 3563 0 2 437,607, 0,437, -,-, 664413 LINE CR1 585 chrUn_NT_468239v1 4978 5348 (CCTTG)n 422 + 4978 5348 0 2 159,20, 0,350, +,+, 664423 Simple_repeat Simple_repeat 585 chrUn_NT_468239v1 5345 5773 GGLTR7A 879 + 5345 5773 0 2 174,254, 0,174, +,+, 664425 LTR ERV1 585 chrUn_NT_468239v1 6299 7341 GGLTR7A 798 + 6299 7341 0 2 458,583, 0,459, +,+, 664427 LTR ERV1 585 chrUn_NT_468239v1 9274 9588 GGLTR3E1 684 + 9274 9588 0 2 134,154, 0,160, +,+, 664430 LTR ERVL 585 chrUn_NT_468239v1 9622 11724 GGERVL-B-int 750 + 9622 11724 0 3 314,1314,426, 0,314,1676, +,+,+, 664431 LTR ERVL 585 chrUn_NT_468241v1 7007 8359 CR1-X 390 - 7007 8359 0 2 156,89, 0,1263, -,-, 664441 LINE CR1 585 chrUn_NT_468242v1 4413 6479 (TTAGGG)n 682 + 4413 6479 0 5 548,391,141,225,196, 0,572,989,1585,1870, +,+,+,+,+, 664446 Simple_repeat Simple_repeat 585 chrUn_NT_468242v1 6540 7347 (TTAGGG)n 520 + 6540 7347 0 4 124,17,179,200, 0,360,404,607, +,+,+,+, 664450 Simple_repeat Simple_repeat 585 chrUn_NT_468242v1 8022 8929 (CCCTAA)n 587 + 8022 8929 0 3 421,192,232, 0,463,675, +,+,+, 664454 Simple_repeat Simple_repeat 585 chrUn_NT_468242v1 8979 9370 (CCCTAA)n 560 + 8979 9370 0 2 191,173, 0,218, +,+, 664456 Simple_repeat Simple_repeat 585 chrUn_NT_468242v1 9456 10061 (CCCTAA)n 634 + 9456 10061 0 3 188,174,189, 0,199,416, +,+,+, 664458 Simple_repeat Simple_repeat 585 chrUn_NT_468242v1 11044 11720 (CCCTAA)n 603 + 11044 11720 0 3 265,16,174, 0,471,502, +,+,+, 664465 Simple_repeat Simple_repeat 585 chrUn_NT_468243v1 717 1514 GGXHOI 504 - 717 1514 0 3 223,338,205, 0,237,592, -,-,-, 664469 Satellite W-chromosome 585 chrUn_NT_468243v1 1593 5127 GGXHOI 552 - 1593 5127 0 7 223,269,256,195,297,194,208, 0,241,957,1522,2114,2735,3326, -,-,-,-,-,-,-, 664470 Satellite W-chromosome 585 chrUn_NT_468243v1 5534 6240 GGXHOI 566 - 5534 6240 0 2 186,118, 0,588, -,-, 664477 Satellite W-chromosome 585 chrUn_NT_468243v1 6363 8557 GGXHOI 542 - 6363 8557 0 5 26,192,370,140,40, 0,337,852,1516,2154, -,-,-,-,-, 664479 Satellite W-chromosome 585 chrUn_NT_468243v1 8676 9800 GGXHOI 532 - 8676 9800 0 3 26,215,212, 0,301,912, -,-,-, 664484 Satellite W-chromosome 585 chrUn_NT_468243v1 9869 11029 GGXHOI 526 - 9869 11029 0 3 16,403,215, 0,314,945, -,-,-, 664487 Satellite W-chromosome 585 chrUn_NT_468244v1 1201 1435 (CTCTATGGGG)n 442 + 1201 1435 0 2 116,107, 0,127, +,+, 664496 Satellite Satellite 585 chrUn_NT_468244v1 5088 6054 (CACTT)n 583 + 5088 6054 0 3 368,200,355, 0,395,611, +,+,+, 664499 Simple_repeat Simple_repeat 585 chrUn_NT_468244v1 9010 9250 (ACCCCATAGGG)n 457 - 9010 9250 0 2 49,133, 0,107, -,-, 664509 Satellite Satellite 585 chrUn_NT_468244v1 9268 10433 (ACCCCATAGGG)n 388 + 9268 10433 0 8 120,108,159,121,114,115,106,14, 0,176,304,483,628,774,926,1151, +,+,+,+,+,+,+,+, 664510 Satellite Satellite 585 chrUn_NT_468244v1 10510 11648 (ACCCCATAGGG)n 431 + 10510 11648 0 6 166,76,40,146,155,264, 0,187,382,443,610,874, +,+,+,+,+,+, 664512 Satellite Satellite 585 chrUn_NT_468245v1 2547 2849 (ACCCATTGGG)n 339 + 2547 2849 0 2 120,141, 0,161, +,+, 664519 Satellite Satellite 585 chrUn_NT_468245v1 3278 3579 (ACCCATTGGG)n 353 + 3278 3579 0 2 120,140, 0,161, +,+, 664522 Satellite Satellite 585 chrUn_NT_468247v1 2758 3884 CR1-B2 669 - 2758 3884 0 2 899,224, 0,902, -,-, 664563 LINE CR1 585 chrUn_NT_468247v1 9493 9796 CR1-X 562 - 9493 9796 0 3 45,78,170, 0,55,133, -,-,-, 664569 LINE CR1 585 chrUn_NT_468248v1 5219 9107 Sat-CR1_GG 150 - 5219 9107 0 2 2275,944, 0,2944, -,-, 664575 Satellite Satellite 585 chrUn_NT_468248v1 7494 8163 GGXHOI 582 - 7494 8163 0 2 283,68, 0,601, -,-, 664576 Satellite W-chromosome 585 chrUn_NT_468248v1 8206 10391 GGXHOI 567 - 8206 10391 0 3 1020,70,279, 0,1793,1906, -,-,-, 664577 Satellite W-chromosome 585 chrUn_NT_468250v1 436 3248 GGXHOI 603 - 436 3248 0 5 415,146,446,416,148, 0,426,1234,2237,2664, -,-,-,-,-, 664582 Satellite W-chromosome 585 chrUn_NT_468250v1 5104 8887 GGXHOI 599 - 5104 8887 0 8 247,144,415,146,297,146,299,147, 0,258,958,1384,2200,2508,3326,3636, -,-,-,-,-,-,-,-, 664588 Satellite W-chromosome 585 chrUn_NT_468250v1 10736 11661 GGXHOI 589 - 10736 11661 0 2 247,667, 0,258, -,-, 664595 Satellite W-chromosome 585 chrUn_NT_468251v1 977 8164 GGXHOI 377 - 977 8164 0 9 143,1077,877,164,142,781,2364,741,653, 0,163,1256,2150,2348,2506,3350,5730,6534, -,-,-,-,-,-,-,-,-, 664599 Satellite W-chromosome 585 chrUn_NT_468251v1 8266 10330 GGXHOI 394 - 8266 10330 0 3 1348,146,538, 0,1363,1526, -,-,-, 664600 Satellite W-chromosome 585 chrUn_NT_468252v1 2890 5346 GGXHOI 546 - 2890 5346 0 5 300,186,445,37,211, 0,627,1156,1900,2245, -,-,-,-,-, 664605 Satellite W-chromosome 585 chrUn_NT_468252v1 5422 6456 GGXHOI 508 - 5422 6456 0 2 132,702, 0,332, -,-, 664610 Satellite W-chromosome 585 chrUn_NT_468252v1 6521 10526 GGXHOI 500 - 6521 10526 0 9 146,138,122,192,289,191,726,110,40, 0,208,687,1131,1631,2215,2418,3346,3965, -,-,-,-,-,-,-,-,-, 664612 Satellite W-chromosome 585 chrUn_NT_468252v1 10653 11608 GGXHOI 528 - 10653 11608 0 3 50,192,206, 0,248,749, -,-,-, 664619 Satellite W-chromosome 585 chrUn_NT_468253v1 11035 11422 CR1-G 772 + 11035 11422 0 2 347,40, 0,347, +,+, 664624 LINE CR1 585 chrUn_NT_468254v1 767 2493 GGXHOI 370 + 767 2493 0 2 394,1272, 0,454, +,+, 664627 Satellite W-chromosome 585 chrUn_NT_468254v1 10642 11549 GGXHOI 415 + 10642 11549 0 3 397,120,344, 0,417,563, +,+,+, 664639 Satellite W-chromosome 585 chrUn_NT_468256v1 1045 1155 G-rich 372 + 1045 1155 0 2 49,58, 0,52, +,+, 664642 Low_complexity Low_complexity 585 chrUn_NT_468256v1 3931 4074 GA-rich 316 + 3931 4074 0 2 43,45, 0,98, +,+, 664647 Low_complexity Low_complexity 585 chrUn_NT_468256v1 6976 7108 GA-rich 374 + 6976 7108 0 2 33,44, 0,88, +,+, 664654 Low_complexity Low_complexity 585 chrUn_NT_468257v1 5228 5356 GA-rich 370 + 5228 5356 0 2 42,32, 0,96, +,+, 664678 Low_complexity Low_complexity 585 chrUn_NT_468257v1 6745 6868 GA-rich 382 + 6745 6868 0 2 28,32, 0,91, +,+, 664682 Low_complexity Low_complexity 585 chrUn_NT_468258v1 2845 3934 GGXHOI 381 + 2845 3934 0 3 557,146,352, 0,574,737, +,+,+, 664702 Satellite W-chromosome 585 chrUn_NT_468258v1 4033 5532 GGXHOI 394 + 4033 5532 0 2 393,1048, 0,451, +,+, 664703 Satellite W-chromosome 585 chrUn_NT_468258v1 5709 7124 GGXHOI 400 + 5709 7124 0 3 475,268,594, 0,495,821, +,+,+, 664704 Satellite W-chromosome 585 chrUn_NT_468258v1 7225 7453 GGXHOI 443 + 7225 7453 0 2 148,64, 0,164, +,+, 664705 Satellite W-chromosome 585 chrUn_NT_468258v1 7756 10606 GGXHOI 370 + 7756 10606 0 5 1374,144,271,271,722, 0,1391,1552,1840,2128, +,+,+,+,+, 664706 Satellite W-chromosome 585 chrUn_NT_468258v1 10705 11599 GGXHOI 383 + 10705 11599 0 3 393,270,192, 0,413,702, +,+,+, 664707 Satellite W-chromosome 585 chrUn_NT_468259v1 2249 2531 (CTCTATGGGG)n 564 + 2249 2531 0 2 115,118, 0,164, +,+, 664709 Satellite Satellite 585 chrUn_NT_468260v1 9835 10048 (GGAGT)n 288 + 9835 10048 0 2 69,97, 0,116, +,+, 664740 Simple_repeat Simple_repeat 585 chrUn_NT_468262v1 1329 11684 GGXHOI 400 - 1329 11684 0 11 667,1579,415,496,546,224,462,3049,466,1444,676, 0,688,2282,2752,3266,3873,4117,4600,7695,8221,9679, -,-,-,-,-,-,-,-,-,-,-, 664752 Satellite W-chromosome 585 chrUn_NT_468263v1 4146 6610 GGLTR7-int 598 + 4146 6610 0 2 338,795, 0,1669, +,+, 664759 LTR ERV1 585 chrUn_NT_468263v1 6622 9048 GGERV10_LTR 848 - 6622 9048 0 2 38,41, 0,2385, -,-, 664762 LTR ERVL 585 chrUn_NT_468263v1 6789 9006 GGLTR10D-int 917 - 6789 9006 0 2 363,1851, 0,366, -,-, 664763 LTR ERVK 585 chrUn_NT_468263v1 9993 11522 (CGAGG)n 466 + 9993 11522 0 3 966,40,300, 0,1149,1229, +,+,+, 664766 Simple_repeat Simple_repeat 585 chrUn_NT_468268v1 11091 11669 GGLTR12B 690 - 11091 11669 0 2 395,183, 0,395, -,-, 664794 LTR ERVL 585 chrUn_NT_468270v1 10948 11671 GGXHOI 332 + 10948 11671 0 2 451,216, 0,507, +,+, 664817 Satellite W-chromosome 585 chrUn_NT_468271v1 5932 7380 GGXHOI 540 - 5932 7380 0 2 970,283, 0,1165, -,-, 664822 Satellite W-chromosome 585 chrUn_NT_468272v1 8915 9020 (A)n 929 + 8915 9020 0 2 37,41, 0,64, +,+, 664834 Simple_repeat Simple_repeat 585 chrUn_NT_468272v1 9112 9277 A-rich 557 + 9112 9277 0 2 100,48, 0,117, +,+, 664835 Low_complexity Low_complexity 585 chrUn_NT_468272v1 10985 11069 (T)n 762 + 10985 11069 0 2 30,24, 0,60, +,+, 664840 Simple_repeat Simple_repeat 585 chrUn_NT_468274v1 786 2098 GGXHOI 294 - 786 2098 0 2 157,1118, 0,194, -,-, 664846 Satellite W-chromosome 585 chrUn_NT_468274v1 2211 3546 GGXHOI 399 - 2211 3546 0 2 1054,264, 0,1071, -,-, 664847 Satellite W-chromosome 585 chrUn_NT_468274v1 3717 7154 GGXHOI 374 - 3717 7154 0 7 89,358,148,1384,150,911,262, 0,102,478,685,2086,2248,3175, -,-,-,-,-,-,-, 664848 Satellite W-chromosome 585 chrUn_NT_468274v1 8914 9464 GGXHOI 319 - 8914 9464 0 3 209,92,211, 0,230,339, -,-,-, 664851 Satellite W-chromosome 585 chrUn_NT_468274v1 9582 11662 GGXHOI 371 - 9582 11662 0 2 1715,351, 0,1729, -,-, 664852 Satellite W-chromosome 585 chrUn_NT_468277v1 8970 9542 GGXHOI 341 - 8970 9542 0 2 342,170, 0,402, -,-, 664864 Satellite W-chromosome 585 chrUn_NT_468277v1 9691 11590 GGXHOI 335 - 9691 11590 0 3 869,333,662, 0,891,1237, -,-,-, 664865 Satellite W-chromosome 585 chrUn_NT_468278v1 8479 11615 GGXHOI 417 + 8479 11615 0 2 2111,1010, 0,2126, +,+, 664867 Satellite W-chromosome 585 chrUn_NT_468279v1 5680 7426 GGERVL-A-int 746 + 5680 7426 0 2 457,1289, 0,457, +,+, 664869 LTR ERVL 585 chrUn_NT_468280v1 2195 2311 A-rich 498 + 2195 2311 0 2 52,37, 0,79, +,+, 664879 Low_complexity Low_complexity 585 chrUn_NT_468282v1 536 1559 (CGAGG)n 530 + 536 1559 0 4 175,401,185,175, 0,210,628,848, +,+,+,+, 664898 Simple_repeat Simple_repeat 585 chrUn_NT_468282v1 2276 2656 (CGAGG)n 489 + 2276 2656 0 2 172,186, 0,194, +,+, 664902 Simple_repeat Simple_repeat 585 chrUn_NT_468282v1 2798 4421 (CGAGG)n 530 + 2798 4421 0 5 179,174,179,561,444, 0,206,404,601,1179, +,+,+,+,+, 664904 Simple_repeat Simple_repeat 585 chrUn_NT_468282v1 4560 5418 (CGAGG)n 515 + 4560 5418 0 4 178,189,201,179, 0,233,445,679, +,+,+,+, 664906 Simple_repeat Simple_repeat 585 chrUn_NT_468282v1 7964 8496 (CGAGG)n 545 + 7964 8496 0 2 311,178, 0,354, +,+, 664919 Simple_repeat Simple_repeat 585 chrUn_NT_468282v1 9188 10401 (CGAGG)n 486 + 9188 10401 0 3 108,720,23, 0,288,1190, +,+,+, 664921 Simple_repeat Simple_repeat 585 chrUn_NT_468283v1 2297 7709 GGERV10_LTR 842 - 2297 7709 0 2 5193,218, 0,5194, -,-, 664935 LTR ERVL 585 chrUn_NT_468283v1 9217 10869 ENS1B-LTR 615 - 9217 10869 0 3 356,224,411, 0,356,1241, -,-,-, 664940 LTR ERVL 585 chrUn_NT_468283v1 9647 10420 ENS1B-LTR 637 - 9647 10420 0 2 224,543, 0,230, -,-, 664941 LTR ERVL 585 chrUn_NT_468284v1 3636 4762 (ACCCCATAGGG)n 601 + 3636 4762 0 4 220,76,168,283, 0,431,549,843, +,+,+,+, 664946 Satellite Satellite 585 chrUn_NT_468284v1 7600 10120 (ACCCCATAGGG)n 479 - 7600 10120 0 16 123,100,112,98,91,101,90,121,101,123,101,123,129,96,112,98, 0,185,336,497,654,796,947,1087,1259,1410,1585,1736,1909,2101,2259,2422, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 664951 Satellite Satellite 585 chrUn_NT_468284v1 10184 10599 (ACCCCATAGGG)n 482 - 10184 10599 0 3 103,100,102, 0,163,313, -,-,-, 664952 Satellite Satellite 585 chrUn_NT_468284v1 11066 11686 (ACCCCATAGGG)n 447 - 11066 11686 0 4 120,121,108,108, 0,170,341,512, -,-,-,-, 664953 Satellite Satellite 585 chrUn_NT_468287v1 7160 10248 GGLTR7-int 401 - 7160 10248 0 4 277,941,1612,114, 0,324,1360,2974, -,-,-,-, 664984 LTR ERV1 585 chrUn_NT_468288v1 4226 4281 (CCCCTC)n 462 + 4226 4281 0 2 13,6, 0,49, +,+, 664993 Simple_repeat Simple_repeat 585 chrUn_NT_468288v1 5226 8774 GGLTR7-int 404 + 5226 8774 0 4 103,1602,954,275, 0,569,2267,3273, +,+,+,+, 664995 LTR ERV1 585 chrUn_NT_468289v1 2098 10805 GGXHOI 444 + 2098 10805 0 14 234,2098,357,148,521,272,1101,779,441,356,563,905,246,415, 0,252,2407,2782,2947,3486,3775,4887,5684,6140,6512,7087,8029,8292, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 665000 Satellite W-chromosome 585 chrUn_NT_468289v1 10894 11635 GGXHOI 416 + 10894 11635 0 2 540,149, 0,592, +,+, 665001 Satellite W-chromosome 585 chrUn_NT_468290v1 466 854 (CAAGG)n 576 + 466 854 0 2 181,207, 0,181, +,+, 665003 Simple_repeat Simple_repeat 585 chrUn_NT_468290v1 1404 2038 (CAGGC)n 503 + 1404 2038 0 3 260,16,172, 0,427,462, +,+,+, 665007 Simple_repeat Simple_repeat 585 chrUn_NT_468290v1 2438 2802 (CAAGG)n 619 + 2438 2802 0 2 176,188, 0,176, +,+, 665013 Simple_repeat Simple_repeat 585 chrUn_NT_468290v1 2784 3422 (CAGGC)n 546 + 2784 3422 0 2 245,216, 0,422, +,+, 665014 Simple_repeat Simple_repeat 585 chrUn_NT_468290v1 3531 4406 CR1-F0 879 + 3531 4406 0 2 741,134, 0,741, +,+, 665017 LINE CR1 585 chrUn_NT_468290v1 4708 5166 (CCTTT)n 408 + 4708 5166 0 2 16,126, 0,332, +,+, 665019 Simple_repeat Simple_repeat 585 chrUn_NT_468293v1 7432 11617 GGXHOI 405 + 7432 11617 0 4 1336,1126,191,409, 0,1388,2535,3776, +,+,+,+, 665042 Satellite W-chromosome 585 chrUn_NT_468293v1 10236 10864 GGXHOI 365 + 10236 10864 0 2 205,398, 0,230, +,+, 665044 Satellite W-chromosome 585 chrUn_NT_468294v1 10172 11266 CR1-B2 694 + 10172 11266 0 2 206,885, 0,209, +,+, 665053 LINE CR1 585 chrUn_NT_468296v1 244 2038 GGXHOI 550 - 244 2038 0 4 194,299,194,60, 0,505,1127,1734, -,-,-,-, 665063 Satellite W-chromosome 585 chrUn_NT_468296v1 2162 3202 GGXHOI 540 - 2162 3202 0 3 142,313,160, 0,346,880, -,-,-, 665067 Satellite W-chromosome 585 chrUn_NT_468296v1 3285 5472 GGXHOI 558 - 3285 5472 0 5 142,186,232,194,211, 0,338,916,1471,1976, -,-,-,-,-, 665070 Satellite W-chromosome 585 chrUn_NT_468296v1 5883 7725 GGXHOI 546 - 5883 7725 0 4 112,299,37,110, 0,505,1283,1732, -,-,-,-, 665076 Satellite W-chromosome 585 chrUn_NT_468296v1 7802 11626 GGXHOI 496 - 7802 11626 0 7 20,194,197,149,198,184,685, 0,333,940,1460,2066,2587,3139, -,-,-,-,-,-,-, 665080 Satellite W-chromosome 585 chrUn_NT_468297v1 955 2048 GGXHOI 456 + 955 2048 0 2 270,802, 0,291, +,+, 665088 Satellite W-chromosome 585 chrUn_NT_468297v1 2248 5877 GGXHOI 359 + 2248 5877 0 8 131,324,184,611,369,287,1244,264, 0,161,526,734,1367,1768,2101,3365, +,+,+,+,+,+,+,+, 665089 Satellite W-chromosome 585 chrUn_NT_468297v1 5951 8617 GGXHOI 424 + 5951 8617 0 2 1344,1279, 0,1387, +,+, 665090 Satellite W-chromosome 585 chrUn_NT_468298v1 3652 5438 GGXHOI 368 - 3652 5438 0 6 156,138,90,589,323,268, 0,209,399,529,1155,1518, -,-,-,-,-,-, 665096 Satellite W-chromosome 585 chrUn_NT_468298v1 6311 8949 GGXHOI 357 - 6311 8949 0 8 140,381,138,136,705,130,650,147, 0,177,572,721,900,1647,1792,2491, -,-,-,-,-,-,-,-, 665100 Satellite W-chromosome 585 chrUn_NT_468298v1 9017 11213 GGXHOI 358 - 9017 11213 0 10 129,132,486,74,135,138,128,214,250,271, 0,147,297,801,896,1045,1224,1390,1616,1925, -,-,-,-,-,-,-,-,-,-, 665101 Satellite W-chromosome 585 chrUn_NT_468299v1 382 942 GGXHOI 542 - 382 942 0 2 20,151, 0,409, -,-, 665104 Satellite W-chromosome 585 chrUn_NT_468299v1 1031 2620 GGXHOI 534 - 1031 2620 0 2 196,1112, 0,477, -,-, 665106 Satellite W-chromosome 585 chrUn_NT_468299v1 2684 3230 GGXHOI 476 - 2684 3230 0 2 20,139, 0,407, -,-, 665108 Satellite W-chromosome 585 chrUn_NT_468299v1 3313 4355 GGXHOI 520 - 3313 4355 0 2 489,537, 0,505, -,-, 665110 Satellite W-chromosome 585 chrUn_NT_468299v1 4719 5300 GGXHOI 532 - 4719 5300 0 2 38,222, 0,359, -,-, 665111 Satellite W-chromosome 585 chrUn_NT_468299v1 5376 7609 GGXHOI 556 - 5376 7609 0 5 491,20,150,225,135, 0,507,915,1466,2098, -,-,-,-,-, 665114 Satellite W-chromosome 585 chrUn_NT_468299v1 7699 8750 GGXHOI 561 - 7699 8750 0 4 11,188,21,118, 0,313,517,933, -,-,-,-, 665118 Satellite W-chromosome 585 chrUn_NT_468299v1 8870 11624 GGXHOI 514 - 8870 11624 0 5 506,19,255,360,848, 0,521,936,1515,1906, -,-,-,-,-, 665121 Satellite W-chromosome 585 chrUn_NT_468300v1 3135 11611 GGXHOI 353 - 3135 11611 0 12 279,222,786,462,617,131,785,989,791,729,953,1469, 0,296,566,1367,1870,2524,2667,3474,4484,5291,6035,7007, -,-,-,-,-,-,-,-,-,-,-,-, 665125 Satellite W-chromosome 585 chrUn_NT_468301v1 4359 5108 CR1-F 277 - 4359 5108 0 2 552,197, 0,552, -,-, 665130 LINE CR1 585 chrUn_NT_468302v1 1405 2312 GGXHOI 381 - 1405 2312 0 2 400,448, 0,459, -,-, 665144 Satellite W-chromosome 585 chrUn_NT_468302v1 3496 5146 GGXHOI 372 - 3496 5146 0 4 289,107,292,863, 0,330,452,787, -,-,-,-, 665147 Satellite W-chromosome 585 chrUn_NT_468302v1 9213 9986 GGXHOI 380 - 9213 9986 0 2 468,290, 0,483, -,-, 665156 Satellite W-chromosome 585 chrUn_NT_468302v1 10150 10897 GGXHOI 372 - 10150 10897 0 2 359,331, 0,416, -,-, 665157 Satellite W-chromosome 585 chrUn_NT_468303v1 10285 11617 GGXHOI 418 - 10285 11617 0 2 516,796, 0,536, -,-, 665160 Satellite W-chromosome 585 chrUn_NT_468304v1 1183 1421 (GCCCCACAGCT)n 395 + 1183 1421 0 2 111,74, 0,164, +,+, 665166 Satellite Satellite 585 chrUn_NT_468304v1 1855 2117 (GCCCCACAGCT)n 380 + 1855 2117 0 2 102,108, 0,154, +,+, 665167 Satellite Satellite 585 chrUn_NT_468304v1 2908 3126 (GCCCCACAGCT)n 514 + 2908 3126 0 2 103,61, 0,157, +,+, 665170 Satellite Satellite 585 chrUn_NT_468304v1 3230 4958 (GCCCCACAGCT)n 398 + 3230 4958 0 11 116,103,113,103,114,105,114,106,107,114,103, 0,170,326,492,648,815,973,1139,1298,1458,1625, +,+,+,+,+,+,+,+,+,+,+, 665171 Satellite Satellite 585 chrUn_NT_468304v1 5169 5856 (GCCCCACAGCT)n 426 + 5169 5856 0 5 108,102,100,112,61, 0,158,308,461,626, +,+,+,+,+, 665173 Satellite Satellite 585 chrUn_NT_468304v1 5956 7146 (GCCCCACAGCT)n 427 + 5956 7146 0 8 112,103,113,104,109,103,114,61, 0,165,320,486,643,808,963,1129, +,+,+,+,+,+,+,+, 665174 Satellite Satellite 585 chrUn_NT_468304v1 9226 9632 (GCCCCACAGCT)n 460 + 9226 9632 0 3 138,102,60, 0,191,346, +,+,+, 665179 Satellite Satellite 585 chrUn_NT_468304v1 9731 10931 (GCCCCACAGCT)n 427 + 9731 10931 0 8 105,108,104,112,106,115,109,61, 0,158,323,479,643,806,974,1139, +,+,+,+,+,+,+,+, 665180 Satellite Satellite 585 chrUn_NT_468305v1 1751 2310 GGXHOI 441 - 1751 2310 0 2 277,267, 0,292, -,-, 665183 Satellite W-chromosome 585 chrUn_NT_468305v1 2500 8146 GGXHOI 370 - 2500 8146 0 12 1209,144,149,130,141,927,684,224,1015,276,195,287, 0,1220,1387,1553,1723,1879,2819,3535,3790,4842,5140,5359, -,-,-,-,-,-,-,-,-,-,-,-, 665184 Satellite W-chromosome 585 chrUn_NT_468305v1 8245 11028 GGXHOI 341 - 8245 11028 0 6 301,1114,376,161,181,532, 0,312,1453,1854,2028,2251, -,-,-,-,-,-, 665185 Satellite W-chromosome 585 chrUn_NT_468307v1 809 1283 GGLTR3F2 680 - 809 1283 0 2 223,221, 0,253, -,-, 665190 LTR ERVL 585 chrUn_NT_468309v1 8294 9412 CR1-B2 697 - 8294 9412 0 2 894,221, 0,897, -,-, 665206 LINE CR1 585 chrUn_NT_468311v1 2168 4053 GGXHOI 373 - 2168 4053 0 3 1083,287,459, 0,1098,1426, -,-,-, 665232 Satellite W-chromosome 585 chrUn_NT_468311v1 4624 9136 GGXHOI 397 - 4624 9136 0 4 1582,1427,1057,399, 0,1597,3044,4113, -,-,-,-, 665234 Satellite W-chromosome 585 chrUn_NT_468311v1 9699 11600 GGXHOI 415 - 9699 11600 0 2 998,883, 0,1018, -,-, 665236 Satellite W-chromosome 585 chrUn_NT_468312v1 526 881 (CGAGG)n 476 + 526 881 0 2 133,38, 0,317, +,+, 665240 Simple_repeat Simple_repeat 585 chrUn_NT_468312v1 1565 2169 (CGAGG)n 526 + 1565 2169 0 2 178,410, 0,194, +,+, 665245 Simple_repeat Simple_repeat 585 chrUn_NT_468312v1 2249 3329 (CGAGG)n 576 + 2249 3329 0 3 177,504,201, 0,198,879, +,+,+, 665247 Simple_repeat Simple_repeat 585 chrUn_NT_468312v1 3976 6123 (CGAGG)n 537 + 3976 6123 0 3 1578,342,175, 0,1608,1972, +,+,+, 665252 Simple_repeat Simple_repeat 585 chrUn_NT_468312v1 6199 7558 (CGAGG)n 526 + 6199 7558 0 3 314,389,307, 0,484,1052, +,+,+, 665253 Simple_repeat Simple_repeat 585 chrUn_NT_468312v1 8090 9012 (CGAGG)n 525 + 8090 9012 0 3 275,305,268, 0,300,654, +,+,+, 665259 Simple_repeat Simple_repeat 585 chrUn_NT_468312v1 9788 11251 (CGAGG)n 542 + 9788 11251 0 5 184,273,234,179,477, 0,228,527,807,986, +,+,+,+,+, 665263 Simple_repeat Simple_repeat 585 chrUn_NT_468313v1 483 1698 (CCTCG)n 552 + 483 1698 0 3 175,809,186, 0,205,1029, +,+,+, 665266 Simple_repeat Simple_repeat 585 chrUn_NT_468313v1 4458 6838 (CCTCG)n 559 + 4458 6838 0 7 176,177,336,177,244,359,689, 0,207,420,813,1049,1319,1691, +,+,+,+,+,+,+, 665277 Simple_repeat Simple_repeat 585 chrUn_NT_468313v1 7639 8678 (CCTCG)n 512 + 7639 8678 0 2 685,174, 0,865, +,+, 665283 Simple_repeat Simple_repeat 585 chrUn_NT_468313v1 9862 11521 (CCTCG)n 545 + 9862 11521 0 4 735,133,120,293, 0,752,1068,1366, +,+,+,+, 665289 Simple_repeat Simple_repeat 585 chrUn_NT_468314v1 9803 11592 GGLTR11 834 + 9803 11592 0 2 190,1598, 0,191, +,+, 665294 LTR ERV1 585 chrUn_NT_468315v1 1174 1717 CR1-X 414 - 1174 1717 0 3 212,130,165, 0,248,378, -,-,-, 665298 LINE CR1 585 chrUn_NT_468315v1 6305 7418 CR1-B2 710 - 6305 7418 0 2 885,225, 0,888, -,-, 665304 LINE CR1 585 chrUn_NT_468316v1 748 1815 GGXHOI 360 + 748 1815 0 3 469,132,427, 0,486,640, +,+,+, 665307 Satellite W-chromosome 585 chrUn_NT_468316v1 1880 3745 GGXHOI 359 + 1880 3745 0 3 121,157,1526, 0,134,339, +,+,+, 665308 Satellite W-chromosome 585 chrUn_NT_468316v1 5357 10593 GGXHOI 406 + 5357 10593 0 5 175,150,1535,1293,2005, 0,190,359,1917,3231, +,+,+,+,+, 665310 Satellite W-chromosome 585 chrUn_NT_468318v1 510 5201 ENS1-LTR 921 + 510 5201 0 3 930,2828,933, 0,930,3758, +,+,+, 665314 LTR ERVL 585 chrUn_NT_468318v1 5205 8263 GGXHOI 357 - 5205 8263 0 3 2420,105,503, 0,2433,2555, -,-,-, 665315 Satellite W-chromosome 585 chrUn_NT_468318v1 8738 9643 GGXHOI 409 - 8738 9643 0 3 154,213,502, 0,174,403, -,-,-, 665317 Satellite W-chromosome 585 chrUn_NT_468318v1 9749 11586 GGXHOI 431 - 9749 11586 0 4 305,134,224,1115, 0,339,485,722, -,-,-,-, 665318 Satellite W-chromosome 585 chrUn_NT_468319v1 1424 2471 GGXHOI 443 + 1424 2471 0 2 176,857, 0,190, +,+, 665321 Satellite W-chromosome 585 chrUn_NT_468319v1 2633 3408 GGXHOI 479 + 2633 3408 0 3 312,277,156, 0,330,619, +,+,+, 665322 Satellite W-chromosome 585 chrUn_NT_468319v1 3476 5886 GGXHOI 455 + 3476 5886 0 3 652,1380,281, 0,686,2129, +,+,+, 665323 Satellite W-chromosome 585 chrUn_NT_468319v1 6051 11087 GGXHOI 443 + 6051 11087 0 8 689,197,421,130,473,182,561,2192, 0,701,957,1389,1531,2021,2225,2844, +,+,+,+,+,+,+,+, 665324 Satellite W-chromosome 585 chrUn_NT_468319v1 11176 11551 GGXHOI 410 + 11176 11551 0 2 209,147, 0,228, +,+, 665325 Satellite W-chromosome 585 chrUn_NT_468323v1 8416 11567 GGXHOI 562 + 8416 11567 0 7 280,63,207,259,185,274,265, 0,478,573,1090,1796,2287,2886, +,+,+,+,+,+,+, 665365 Satellite W-chromosome 585 chrUn_NT_468324v1 6732 10177 GGXHOI 370 - 6732 10177 0 3 548,820,2020, 0,587,1425, -,-,-, 665374 Satellite W-chromosome 585 chrUn_NT_468325v1 757 8639 GGXHOI 413 - 757 8639 0 4 257,3071,1049,3415, 0,274,3362,4467, -,-,-,-, 665377 Satellite W-chromosome 585 chrUn_NT_468325v1 8769 11578 GGXHOI 425 - 8769 11578 0 2 947,1845, 0,964, -,-, 665378 Satellite W-chromosome 585 chrUn_NT_468327v1 1347 10902 GGXHOI 390 + 1347 10902 0 6 2036,606,1769,1771,2877,408, 0,2057,2680,4466,6254,9147, +,+,+,+,+,+, 665400 Satellite W-chromosome 585 chrUn_NT_468328v1 5006 11573 Z-REP 883 + 5006 11573 0 2 5165,1159, 0,5408, +,+, 665405 Satellite macro 585 chrUn_NT_468329v1 875 4292 GGERV20_I-int 909 + 875 4292 0 3 923,1991,214, 0,1212,3203, +,+,+, 665407 LTR ERVL 585 chrUn_NT_468330v1 1044 2248 (CAATG)n 374 + 1044 2248 0 4 174,183,381,384, 0,199,439,820, +,+,+,+, 665412 Simple_repeat Simple_repeat 585 chrUn_NT_468330v1 2303 2908 (CAATG)n 353 + 2303 2908 0 3 175,193,175, 0,190,430, +,+,+, 665414 Simple_repeat Simple_repeat 585 chrUn_NT_468330v1 7844 8266 (CATG)n 386 + 7844 8266 0 2 180,195, 0,227, +,+, 665422 Simple_repeat Simple_repeat 585 chrUn_NT_468330v1 10234 10573 (CTCTATGGGG)n 544 - 10234 10573 0 2 152,164, 0,175, -,-, 665427 Satellite Satellite 585 chrUn_NT_468330v1 10622 11379 (CTCTATGGGG)n 521 + 10622 11379 0 4 247,182,141,114, 0,268,471,643, +,+,+,+, 665428 Satellite Satellite 585 chrUn_NT_468331v1 1510 1630 (C)n 757 + 1510 1630 0 2 21,53, 0,67, +,+, 665432 Simple_repeat Simple_repeat 585 chrUn_NT_468331v1 4454 5076 CR1-H 676 - 4454 5076 0 2 139,477, 0,145, -,-, 665435 LINE CR1 585 chrUn_NT_468331v1 6035 6135 G-rich 624 + 6035 6135 0 2 32,29, 0,71, +,+, 665436 Low_complexity Low_complexity 585 chrUn_NT_468331v1 7525 8788 CR1-H 604 - 7525 8788 0 2 117,1146, 0,117, -,-, 665440 LINE CR1 585 chrUn_NT_468331v1 10524 10632 (TTTGC)n 358 + 10524 10632 0 2 52,8, 0,100, +,+, 665441 Simple_repeat Simple_repeat 585 chrUn_NT_468332v1 1283 2025 GGXHOI 375 + 1283 2025 0 2 587,140, 0,602, +,+, 665446 Satellite W-chromosome 585 chrUn_NT_468332v1 2781 9278 GGXHOI 436 + 2781 9278 0 5 889,1762,314,3014,343, 0,906,2727,3083,6154, +,+,+,+,+, 665448 Satellite W-chromosome 585 chrUn_NT_468332v1 10744 11560 GGXHOI 443 + 10744 11560 0 2 464,298, 0,518, +,+, 665451 Satellite W-chromosome 585 chrUn_NT_468333v1 2919 4273 CR1-X 375 - 2919 4273 0 2 156,111, 0,1243, -,-, 665456 LINE CR1 585 chrUn_NT_468334v1 1349 1642 (CTCTATGGGG)n 411 - 1349 1642 0 2 121,121, 0,172, -,-, 665468 Satellite Satellite 585 chrUn_NT_468334v1 2197 2491 (CTCTATGGGG)n 412 - 2197 2491 0 2 122,121, 0,173, -,-, 665470 Satellite Satellite 585 chrUn_NT_468334v1 3085 3380 (CTCTATGGGG)n 359 - 3085 3380 0 2 122,129, 0,166, -,-, 665472 Satellite Satellite 585 chrUn_NT_468335v1 622 1707 (CGAGG)n 530 + 622 1707 0 2 301,739, 0,346, +,+, 665478 Simple_repeat Simple_repeat 585 chrUn_NT_468335v1 3185 4015 (CGAGG)n 562 + 3185 4015 0 3 436,179,198, 0,453,632, +,+,+, 665484 Simple_repeat Simple_repeat 585 chrUn_NT_468335v1 4230 5205 (CGAGG)n 560 + 4230 5205 0 2 316,482, 0,493, +,+, 665486 Simple_repeat Simple_repeat 585 chrUn_NT_468335v1 7136 7719 (CCTCG)n 505 + 7136 7719 0 3 176,180,189, 0,202,394, +,+,+, 665493 Simple_repeat Simple_repeat 585 chrUn_NT_468335v1 10314 10868 (CCTCG)n 519 + 10314 10868 0 2 188,342, 0,212, +,+, 665503 Simple_repeat Simple_repeat 585 chrUn_NT_468337v1 7756 8887 CR1-B2 695 + 7756 8887 0 2 228,900, 0,231, +,+, 665516 LINE CR1 585 chrUn_NT_468339v1 1960 5549 CR1-H 588 - 1960 5549 0 4 137,475,86,1076, 0,143,2388,2513, -,-,-,-, 665532 LINE CR1 585 chrUn_NT_468341v1 9396 9515 (C)n 715 + 9396 9515 0 2 35,24, 0,95, +,+, 665550 Simple_repeat Simple_repeat 585 chrUn_NT_468342v1 2643 3682 GGLTR7A 769 - 2643 3682 0 2 576,462, 0,577, -,-, 665561 LTR ERV1 585 chrUn_NT_468342v1 4207 4634 GGLTR7A 868 - 4207 4634 0 2 253,174, 0,253, -,-, 665563 LTR ERV1 585 chrUn_NT_468342v1 4789 5146 (CAAGG)n 572 + 4789 5146 0 2 146,27, 0,330, +,+, 665565 Simple_repeat Simple_repeat 585 chrUn_NT_468342v1 6125 6507 (CAAGG)n 628 + 6125 6507 0 2 111,98, 0,284, +,+, 665573 Simple_repeat Simple_repeat 585 chrUn_NT_468342v1 6527 7571 CR1-F0 883 + 6527 7571 0 2 608,436, 0,608, +,+, 665575 LINE CR1 585 chrUn_NT_468343v1 2394 2516 (CTCCCT)n 336 + 2394 2516 0 2 76,13, 0,109, +,+, 665584 Simple_repeat Simple_repeat 585 chrUn_NT_468344v1 10784 11542 GGXHOI 340 + 10784 11542 0 2 115,623, 0,135, +,+, 665614 Satellite W-chromosome 585 chrUn_NT_468345v1 267 1384 (CGAGG)n 539 + 267 1384 0 3 369,181,519, 0,390,598, +,+,+, 665616 Simple_repeat Simple_repeat 585 chrUn_NT_468345v1 1433 2186 (CGAGG)n 577 + 1433 2186 0 3 342,180,184, 0,368,569, +,+,+, 665618 Simple_repeat Simple_repeat 585 chrUn_NT_468345v1 2457 5231 GGERVL-B-int 724 + 2457 5231 0 3 250,78,2398, 0,298,376, +,+,+, 665620 LTR ERVL 585 chrUn_NT_468345v1 5314 5557 (CTCTATGGGG)n 442 - 5314 5557 0 2 106,31, 0,212, -,-, 665622 Satellite Satellite 585 chrUn_NT_468345v1 5953 6320 GGLTR7B 316 + 5953 6320 0 2 105,236, 0,131, +,+, 665624 LTR ERV1 585 chrUn_NT_468346v1 6621 9428 GGXHOI 387 - 6621 9428 0 3 515,1084,1083, 0,578,1724, -,-,-, 665635 Satellite W-chromosome 585 chrUn_NT_468346v1 10437 11527 GGXHOI 340 - 10437 11527 0 2 178,877, 0,213, -,-, 665637 Satellite W-chromosome 585 chrUn_NT_468348v1 6269 6890 (ACCCCATAGGG)n 547 - 6269 6890 0 4 128,46,134,136, 0,187,290,485, -,-,-,-, 665644 Satellite Satellite 585 chrUn_NT_468348v1 7428 7856 (ACCCCATAGGG)n 581 - 7428 7856 0 3 46,133,133, 0,102,295, -,-,-, 665647 Satellite Satellite 585 chrUn_NT_468348v1 8395 8825 (ACCCCATAGGG)n 587 - 8395 8825 0 3 46,134,133, 0,102,297, -,-,-, 665650 Satellite Satellite 585 chrUn_NT_468348v1 9363 9793 (ACCCCATAGGG)n 587 - 9363 9793 0 3 46,134,133, 0,103,297, -,-,-, 665653 Satellite Satellite 585 chrUn_NT_468348v1 10332 10762 (ACCCCATAGGG)n 581 - 10332 10762 0 3 46,134,132, 0,102,298, -,-,-, 665656 Satellite Satellite 585 chrUn_NT_468349v1 3926 9800 GGXHOI 535 - 3926 9800 0 9 744,349,22,167,272,474,551,84,126, 0,1453,2145,2205,2420,2978,3989,4881,5748, -,-,-,-,-,-,-,-,-, 665663 Satellite W-chromosome 585 chrUn_NT_468351v1 1648 2299 G-rich 388 + 1648 2299 0 2 38,567, 0,84, +,+, 665678 Low_complexity Low_complexity 585 chrUn_NT_468355v1 3293 10396 GGXHOI 401 - 3293 10396 0 7 1422,1372,471,505,1488,204,1470, 0,1442,2860,3343,3863,5390,5633, -,-,-,-,-,-,-, 665710 Satellite W-chromosome 585 chrUn_NT_468357v1 451 1470 GGXHOI 350 - 451 1470 0 2 552,451, 0,568, -,-, 665720 Satellite W-chromosome 585 chrUn_NT_468357v1 1694 2613 GGXHOI 337 - 1694 2613 0 2 511,391, 0,528, -,-, 665721 Satellite W-chromosome 585 chrUn_NT_468357v1 2792 3755 GGXHOI 305 - 2792 3755 0 2 392,510, 0,453, -,-, 665722 Satellite W-chromosome 585 chrUn_NT_468357v1 7348 8644 GGXHOI 371 - 7348 8644 0 2 967,310, 0,986, -,-, 665728 Satellite W-chromosome 585 chrUn_NT_468359v1 5164 6144 GGXHOI 374 - 5164 6144 0 2 604,315, 0,665, -,-, 665758 Satellite W-chromosome 585 chrUn_NT_468359v1 8874 10119 GGXHOI 382 - 8874 10119 0 2 732,492, 0,753, -,-, 665763 Satellite W-chromosome 585 chrUn_NT_468360v1 9722 10235 GGLTR3F1 756 + 9722 10235 0 2 401,78, 0,435, +,+, 665777 LTR ERVL 585 chrUn_NT_468362v1 1372 2273 (ACCCCATAGGG)n 567 + 1372 2273 0 4 374,129,132,132, 0,432,593,769, +,+,+,+, 665787 Satellite Satellite 585 chrUn_NT_468362v1 2580 3363 (ACCCCATAGGG)n 559 + 2580 3363 0 3 475,129,130, 0,510,653, +,+,+, 665788 Satellite Satellite 585 chrUn_NT_468362v1 3481 3893 (ACCCCATAGGG)n 561 + 3481 3893 0 2 260,130, 0,282, +,+, 665789 Satellite Satellite 585 chrUn_NT_468362v1 3972 4368 (ACCCCATAGGG)n 585 + 3972 4368 0 2 130,234, 0,162, +,+, 665790 Satellite Satellite 585 chrUn_NT_468362v1 4654 5445 (ACCCCATAGGG)n 593 + 4654 5445 0 3 526,98,130, 0,549,661, +,+,+, 665791 Satellite Satellite 585 chrUn_NT_468362v1 5566 6455 (ACCCCATAGGG)n 575 + 5566 6455 0 5 130,130,150,130,233, 0,188,331,494,656, +,+,+,+,+, 665792 Satellite Satellite 585 chrUn_NT_468362v1 6565 7533 (ACCCCATAGGG)n 588 + 6565 7533 0 3 127,648,130, 0,176,838, +,+,+, 665793 Satellite Satellite 585 chrUn_NT_468362v1 7654 8520 (ACCCCATAGGG)n 575 + 7654 8520 0 3 259,207,374, 0,272,492, +,+,+, 665794 Satellite Satellite 585 chrUn_NT_468362v1 8629 9594 (ACCCCATAGGG)n 585 + 8629 9594 0 4 127,112,412,130, 0,175,409,835, +,+,+,+, 665795 Satellite Satellite 585 chrUn_NT_468362v1 9715 10129 (ACCCCATAGGG)n 577 + 9715 10129 0 2 264,127, 0,287, +,+, 665797 Satellite Satellite 585 chrUn_NT_468363v1 3409 4802 GGLTR7-int 346 - 3409 4802 0 3 280,232,100, 0,1059,1293, -,-,-, 665808 LTR ERV1 585 chrUn_NT_468363v1 5530 8170 GGERVL-B-int 787 - 5530 8170 0 3 911,1065,308, 0,911,2332, -,-,-, 665811 LTR ERVL 585 chrUn_NT_468363v1 10503 11186 GGLTR7A 806 - 10503 11186 0 2 587,87, 0,596, -,-, 665815 LTR ERV1 585 chrUn_NT_468364v1 1835 3216 GGXHOI 348 - 1835 3216 0 2 592,772, 0,609, -,-, 665819 Satellite W-chromosome 585 chrUn_NT_468364v1 3615 7089 GGXHOI 359 - 3615 7089 0 2 2438,1015, 0,2459, -,-, 665821 Satellite W-chromosome 585 chrUn_NT_468365v1 1751 2548 GGXHOI 366 + 1751 2548 0 3 140,135,433, 0,184,364, +,+,+, 665828 Satellite W-chromosome 585 chrUn_NT_468365v1 2920 3983 GGXHOI 278 + 2920 3983 0 3 332,171,500, 0,372,563, +,+,+, 665830 Satellite W-chromosome 585 chrUn_NT_468365v1 4461 11095 GGXHOI 415 + 4461 11095 0 5 711,985,317,4068,430, 0,727,1725,2085,6204, +,+,+,+,+, 665833 Satellite W-chromosome 585 chrUn_NT_468366v1 5040 5625 (ACCCCATAGGG)n 576 - 5040 5625 0 3 107,151,281, 0,122,304, -,-,-, 665840 Satellite Satellite 585 chrUn_NT_468367v1 8386 9479 GGXHOI 386 + 8386 9479 0 2 500,550, 0,543, +,+, 665856 Satellite W-chromosome 585 chrUn_NT_468369v1 8597 9524 GGXHOI 371 - 8597 9524 0 2 338,570, 0,357, -,-, 665875 Satellite W-chromosome 585 chrUn_NT_468369v1 9682 11501 GGXHOI 381 - 9682 11501 0 3 310,1123,346, 0,330,1473, -,-,-, 665876 Satellite W-chromosome 585 chrUn_NT_468370v1 2123 3483 GGXHOI 493 + 2123 3483 0 3 377,108,508, 0,402,852, +,+,+, 665881 Satellite W-chromosome 585 chrUn_NT_468370v1 3551 11066 GGXHOI 534 + 3551 11066 0 12 762,380,195,297,194,247,194,367,194,297,190,414, 0,1045,1746,2262,2956,3473,4167,4683,5379,5896,6589,7101, +,+,+,+,+,+,+,+,+,+,+,+, 665883 Satellite W-chromosome 585 chrUn_NT_468374v1 2933 3232 GGLTR3E1 748 + 2933 3232 0 2 178,121, 0,178, +,+, 665944 LTR ERVL 585 chrUn_NT_468374v1 5278 6183 CR1-F 899 - 5278 6183 0 2 292,88, 0,817, -,-, 665947 LINE CR1 585 chrUn_NT_468374v1 9648 10438 CR1-F 266 + 9648 10438 0 2 216,560, 0,230, +,+, 665952 LINE CR1 585 chrUn_NT_468378v1 9353 9865 GGLTR3F2 576 + 9353 9865 0 2 233,228, 0,284, +,+, 666013 LTR ERVL 585 chrUn_NT_468380v1 2215 6187 GGXHOI 370 - 2215 6187 0 7 576,2256,132,173,397,176,123, 0,610,2914,3061,3246,3658,3849, -,-,-,-,-,-,-, 666035 Satellite W-chromosome 585 chrUn_NT_468380v1 6307 7102 GGXHOI 429 - 6307 7102 0 3 130,472,138, 0,147,657, -,-,-, 666036 Satellite W-chromosome 585 chrUn_NT_468380v1 7209 10190 GGXHOI 352 - 7209 10190 0 6 205,151,1384,341,557,261, 0,229,396,1797,2152,2720, -,-,-,-,-,-, 666037 Satellite W-chromosome 585 chrUn_NT_468380v1 10962 11478 GGXHOI 363 - 10962 11478 0 2 415,88, 0,428, -,-, 666039 Satellite W-chromosome 585 chrUn_NT_468381v1 3105 11481 GGXHOI 444 - 3105 11481 0 16 260,136,241,895,619,976,535,692,1112,362,271,340,341,227,296,637, 0,309,459,743,1669,2323,3321,3877,4586,5717,6124,6457,6814,7177,7416,7739, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 666042 Satellite W-chromosome 585 chrUn_NT_468382v1 1304 2028 GGXHOI 308 + 1304 2028 0 2 494,180, 0,544, +,+, 666045 Satellite W-chromosome 585 chrUn_NT_468382v1 3249 6254 GGXHOI 371 + 3249 6254 0 3 1650,1009,266, 0,1713,2739, +,+,+, 666047 Satellite W-chromosome 585 chrUn_NT_468382v1 6435 7902 GGXHOI 357 + 6435 7902 0 2 472,932, 0,535, +,+, 666048 Satellite W-chromosome 585 chrUn_NT_468382v1 8137 9823 GGXHOI 329 + 8137 9823 0 3 970,260,422, 0,987,1264, +,+,+, 666049 Satellite W-chromosome 585 chrUn_NT_468385v1 1403 2943 GGXHOI 370 - 1403 2943 0 2 1008,470, 0,1070, -,-, 666069 Satellite W-chromosome 585 chrUn_NT_468385v1 5266 6311 GGXHOI 376 - 5266 6311 0 2 514,470, 0,575, -,-, 666073 Satellite W-chromosome 585 chrUn_NT_468385v1 8406 10172 GGXHOI 382 - 8406 10172 0 2 1318,385, 0,1381, -,-, 666076 Satellite W-chromosome 585 chrUn_NT_468385v1 10356 11203 GGXHOI 333 - 10356 11203 0 2 511,274, 0,573, -,-, 666077 Satellite W-chromosome 585 chrUn_NT_468388v1 6762 8519 CR1-H2 760 + 6762 8519 0 3 298,773,683, 0,298,1074, +,+,+, 666099 LINE CR1 585 chrUn_NT_468389v1 1089 2753 GGXHOI 392 + 1089 2753 0 2 1085,516, 0,1148, +,+, 666104 Satellite W-chromosome 585 chrUn_NT_468389v1 2852 4396 GGXHOI 387 + 2852 4396 0 2 472,1009, 0,535, +,+, 666105 Satellite W-chromosome 585 chrUn_NT_468389v1 5150 6201 GGXHOI 392 + 5150 6201 0 2 472,516, 0,535, +,+, 666107 Satellite W-chromosome 585 chrUn_NT_468389v1 6300 7351 GGXHOI 392 + 6300 7351 0 2 472,516, 0,535, +,+, 666108 Satellite W-chromosome 585 chrUn_NT_468389v1 7450 8501 GGXHOI 392 + 7450 8501 0 2 472,516, 0,535, +,+, 666109 Satellite W-chromosome 585 chrUn_NT_468389v1 8600 9651 GGXHOI 392 + 8600 9651 0 2 472,516, 0,535, +,+, 666110 Satellite W-chromosome 585 chrUn_NT_468391v1 5374 10302 GGXHOI 374 - 5374 10302 0 4 746,373,2393,1325, 0,769,1192,3603, -,-,-,-, 666122 Satellite W-chromosome 585 chrUn_NT_468392v1 5069 9710 GGXHOI 418 - 5069 9710 0 9 1482,125,129,138,1092,163,1122,49,126, 0,1525,1686,1847,1996,3105,3308,4449,4515, -,-,-,-,-,-,-,-,-, 666125 Satellite W-chromosome 585 chrUn_NT_468392v1 9786 11449 GGXHOI 457 - 9786 11449 0 6 282,73,139,576,232,221, 0,295,408,583,1174,1442, -,-,-,-,-,-, 666126 Satellite W-chromosome 585 chrUn_NT_468393v1 1861 11458 GGXHOI 382 - 1861 11458 0 15 627,628,686,259,1998,212,307,792,998,551,229,366,137,984,584, 0,643,1293,2000,2275,4296,4530,4853,5657,6671,7238,7479,7857,8016,9013, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 666128 Satellite W-chromosome 585 chrUn_NT_468394v1 2105 4659 GGXHOI 367 + 2105 4659 0 3 264,920,1334, 0,279,1220, +,+,+, 666133 Satellite W-chromosome 585 chrUn_NT_468394v1 5847 6625 GGXHOI 349 + 5847 6625 0 2 616,145, 0,633, +,+, 666135 Satellite W-chromosome 585 chrUn_NT_468394v1 7414 9489 GGXHOI 327 + 7414 9489 0 5 202,773,471,308,150, 0,252,1070,1599,1925, +,+,+,+,+, 666137 Satellite W-chromosome 585 chrUn_NT_468396v1 1145 2228 GGXHOI 592 + 1145 2228 0 3 205,60,197, 0,545,886, +,+,+, 666145 Satellite W-chromosome 585 chrUn_NT_468396v1 2317 3400 GGXHOI 586 + 2317 3400 0 3 205,60,197, 0,545,886, +,+,+, 666148 Satellite W-chromosome 585 chrUn_NT_468396v1 3489 6916 GGXHOI 564 + 3489 6916 0 4 205,833,832,537, 0,545,1718,2890, +,+,+,+, 666151 Satellite W-chromosome 585 chrUn_NT_468396v1 7005 8088 GGXHOI 588 + 7005 8088 0 2 205,538, 0,545, +,+, 666155 Satellite W-chromosome 585 chrUn_NT_468396v1 8177 9260 GGXHOI 588 + 8177 9260 0 2 205,538, 0,545, +,+, 666157 Satellite W-chromosome 585 chrUn_NT_468396v1 9349 10304 GGXHOI 582 + 9349 10304 0 2 205,197, 0,758, +,+, 666159 Satellite W-chromosome 585 chrUn_NT_468396v1 10393 11230 GGXHOI 449 + 10393 11230 0 3 205,113,129, 0,540,708, +,+,+, 666161 Satellite W-chromosome 585 chrUn_NT_468398v1 7441 10266 GGXHOI 335 - 7441 10266 0 3 1787,174,801, 0,1829,2024, -,-,-, 666172 Satellite W-chromosome 585 chrUn_NT_468399v1 4736 5269 (GCCCCACAGCT)n 528 - 4736 5269 0 2 144,360, 0,173, -,-, 666180 Satellite Satellite 585 chrUn_NT_468399v1 9301 9532 (CTCTATGGGG)n 273 + 9301 9532 0 2 108,108, 0,123, +,+, 666182 Satellite Satellite 585 chrUn_NT_468400v1 627 3189 (CAAGG)n 643 + 627 3189 0 7 287,105,373,181,630,200,364, 0,613,750,1146,1346,1976,2198, +,+,+,+,+,+,+, 666189 Simple_repeat Simple_repeat 585 chrUn_NT_468400v1 3792 4386 (CAAGG)n 640 + 3792 4386 0 2 181,395, 0,199, +,+, 666195 Simple_repeat Simple_repeat 585 chrUn_NT_468400v1 4403 5040 (CAAGG)n 657 + 4403 5040 0 2 428,209, 0,428, +,+, 666197 Simple_repeat Simple_repeat 585 chrUn_NT_468400v1 5071 5486 (CAAGG)n 514 + 5071 5486 0 2 188,187, 0,228, +,+, 666199 Simple_repeat Simple_repeat 585 chrUn_NT_468400v1 6362 7826 (CAAGG)n 633 + 6362 7826 0 4 471,300,74,231, 0,483,1153,1233, +,+,+,+, 666203 Simple_repeat Simple_repeat 585 chrUn_NT_468400v1 8492 11362 GGXHOI 422 - 8492 11362 0 2 2217,631, 0,2239, -,-, 666207 Satellite W-chromosome 585 chrUn_NT_468401v1 9634 10077 CR1-H 610 + 9634 10077 0 2 266,159, 0,284, +,+, 666217 LINE CR1 585 chrUn_NT_468403v1 6470 10056 GGLTR7-int 834 - 6470 10056 0 5 113,257,1558,337,1310, 0,114,372,1939,2276, -,-,-,-,-, 666235 LTR ERV1 585 chrUn_NT_468404v1 568 1903 GGXHOI 382 + 568 1903 0 3 718,137,439, 0,737,896, +,+,+, 666239 Satellite W-chromosome 585 chrUn_NT_468404v1 1992 8105 GGXHOI 421 + 1992 8105 0 5 985,2390,1539,513,584, 0,1001,3416,4970,5529, +,+,+,+,+, 666240 Satellite W-chromosome 585 chrUn_NT_468404v1 8680 9994 GGXHOI 371 + 8680 9994 0 2 260,1023, 0,291, +,+, 666242 Satellite W-chromosome 585 chrUn_NT_468404v1 10374 11434 GGXHOI 398 + 10374 11434 0 2 937,107, 0,953, +,+, 666243 Satellite W-chromosome 585 chrUn_NT_468406v1 4422 7023 GGXHOI 560 - 4422 7023 0 2 885,510, 0,2091, -,-, 666267 Satellite W-chromosome 585 chrUn_NT_468406v1 7081 9885 GGXHOI 550 - 7081 9885 0 3 1104,183,506, 0,1743,2298, -,-,-, 666270 Satellite W-chromosome 585 chrUn_NT_468406v1 9679 10133 Sat-CR1_GG 162 - 9679 10133 0 2 249,42, 0,412, -,-, 666273 Satellite Satellite 585 chrUn_NT_468407v1 1252 2437 CR1-F2 750 - 1252 2437 0 2 405,650, 0,535, -,-, 666279 LINE CR1 585 chrUn_NT_468407v1 4835 5220 (CAAGG)n 652 + 4835 5220 0 2 178,200, 0,185, +,+, 666293 Simple_repeat Simple_repeat 585 chrUn_NT_468407v1 5387 5761 (CAAGG)n 632 + 5387 5761 0 2 113,82, 0,292, +,+, 666295 Simple_repeat Simple_repeat 585 chrUn_NT_468408v1 10144 10767 CR1-H 676 - 10144 10767 0 2 139,478, 0,145, -,-, 666314 LINE CR1 585 chrUn_NT_468409v1 1237 2599 GGXHOI 417 + 1237 2599 0 2 300,1048, 0,314, +,+, 666316 Satellite W-chromosome 585 chrUn_NT_468409v1 2663 8441 GGXHOI 447 + 2663 8441 0 9 528,308,1034,394,354,1142,484,961,338, 0,542,865,1917,2326,2727,3921,4464,5440, +,+,+,+,+,+,+,+,+, 666317 Satellite W-chromosome 585 chrUn_NT_468409v1 8734 10090 GGXHOI 433 + 8734 10090 0 3 617,552,156, 0,632,1200, +,+,+, 666318 Satellite W-chromosome 585 chrUn_NT_468409v1 10383 11431 GGXHOI 387 + 10383 11431 0 3 153,697,143, 0,173,905, +,+,+, 666319 Satellite W-chromosome 585 chrUn_NT_468410v1 896 3071 CR1-F 889 + 896 3071 0 2 604,1571, 0,604, +,+, 666322 LINE CR1 585 chrUn_NT_468410v1 4859 8248 GGLTR7-int 738 - 4859 8248 0 6 116,261,1476,335,515,663, 0,117,379,1864,2199,2726, -,-,-,-,-,-, 666324 LTR ERV1 585 chrUn_NT_468411v1 1929 3680 GGXHOI 336 - 1929 3680 0 3 848,627,247, 0,860,1504, -,-,-, 666330 Satellite W-chromosome 585 chrUn_NT_468411v1 3767 10389 GGXHOI 366 - 3767 10389 0 5 1084,881,2012,792,1747, 0,1140,2039,4063,4875, -,-,-,-,-, 666331 Satellite W-chromosome 585 chrUn_NT_468411v1 10484 11420 GGXHOI 372 - 10484 11420 0 2 584,335, 0,601, -,-, 666332 Satellite W-chromosome 585 chrUn_NT_468413v1 8755 9882 CR1-B2 691 - 8755 9882 0 2 902,222, 0,905, -,-, 666352 LINE CR1 585 chrUn_NT_468415v1 165 831 CR1-F 573 + 165 831 0 3 199,203,180, 0,241,486, +,+,+, 666366 LINE CR1 585 chrUn_NT_468415v1 875 9172 CR1-F 534 + 875 9172 0 25 176,189,199,202,203,203,150,200,203,205,204,155,192,189,197,203,204,204,155,196,177,154,197,55,160, 0,221,452,946,1190,1435,1904,2321,2818,3063,3310,3781,4224,4461,4689,5185,5430,5676,6146,6591,7021,7242,7687,8040,8137, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 666367 LINE CR1 585 chrUn_NT_468415v1 9213 11305 CR1-F 498 + 9213 11305 0 6 199,203,202,204,154,198, 0,496,741,985,1451,1894, +,+,+,+,+,+, 666380 LINE CR1 585 chrUn_NT_468416v1 491 1117 G-rich 390 + 491 1117 0 2 41,538, 0,88, +,+, 666387 Low_complexity Low_complexity 585 chrUn_NT_468418v1 10486 11408 GGXHOI 456 + 10486 11408 0 2 386,522, 0,400, +,+, 666400 Satellite W-chromosome 585 chrUn_NT_468419v1 1001 5802 GGXHOI 388 - 1001 5802 0 6 122,305,1409,1065,1563,225, 0,139,488,1915,2997,4576, -,-,-,-,-,-, 666403 Satellite W-chromosome 585 chrUn_NT_468419v1 5917 11411 GGXHOI 384 - 5917 11411 0 3 819,2770,1873, 0,835,3621, -,-,-, 666404 Satellite W-chromosome 585 chrUn_NT_468420v1 8043 11413 GGXHOI 369 - 8043 11413 0 6 609,632,556,498,672,308, 0,629,1276,1843,2376,3062, -,-,-,-,-,-, 666406 Satellite W-chromosome 585 chrUn_NT_468421v1 3034 3408 (CACTG)n 548 + 3034 3408 0 2 123,64, 0,310, +,+, 666412 Simple_repeat Simple_repeat 585 chrUn_NT_468421v1 4750 5062 (CCCTAA)n 512 + 4750 5062 0 2 112,23, 0,289, +,+, 666419 Simple_repeat Simple_repeat 585 chrUn_NT_468421v1 5066 5494 (CCCCAA)n 602 + 5066 5494 0 2 235,172, 0,256, +,+, 666421 Simple_repeat Simple_repeat 585 chrUn_NT_468421v1 5552 6487 (CCCCAA)n 539 + 5552 6487 0 2 348,575, 0,360, +,+, 666423 Simple_repeat Simple_repeat 585 chrUn_NT_468421v1 7138 7723 (CATAG)n 440 + 7138 7723 0 2 139,49, 0,536, +,+, 666426 Simple_repeat Simple_repeat 585 chrUn_NT_468421v1 7277 7674 (GCATG)n 636 + 7277 7674 0 2 171,48, 0,349, +,+, 666427 Simple_repeat Simple_repeat 585 chrUn_NT_468421v1 8809 8903 (G)n 944 + 8809 8903 0 2 18,19, 0,75, +,+, 666433 Simple_repeat Simple_repeat 585 chrUn_NT_468422v1 7542 7635 GGERV21_LTR 658 + 7542 7635 0 2 45,48, 0,45, +,+, 666449 LTR ERVL 585 chrUn_NT_468423v1 3442 4312 GGLTR7A 789 - 3442 4312 0 4 350,260,196,42, 0,350,632,828, -,-,-,-, 666455 LTR ERV1 585 chrUn_NT_468423v1 4549 7232 GGERV28_I-int 186 - 4549 7232 0 2 1994,376, 0,2307, -,-, 666456 LTR ERVK 585 chrUn_NT_468424v1 1087 2893 GGXHOI 385 - 1087 2893 0 2 1231,518, 0,1288, -,-, 666460 Satellite W-chromosome 585 chrUn_NT_468424v1 3068 4688 GGXHOI 407 - 3068 4688 0 2 401,1163, 0,457, -,-, 666461 Satellite W-chromosome 585 chrUn_NT_468424v1 5510 6730 GGXHOI 393 - 5510 6730 0 2 401,799, 0,421, -,-, 666463 Satellite W-chromosome 585 chrUn_NT_468424v1 7307 8418 GGXHOI 351 - 7307 8418 0 3 369,320,362, 0,386,749, -,-,-, 666465 Satellite W-chromosome 585 chrUn_NT_468424v1 10391 11223 GGXHOI 364 - 10391 11223 0 2 385,390, 0,442, -,-, 666469 Satellite W-chromosome 585 chrUn_NT_468425v1 3769 4893 CR1-B2 695 - 3769 4893 0 2 896,225, 0,899, -,-, 666471 LINE CR1 585 chrUn_NT_468426v1 6232 7642 GGXHOI 323 - 6232 7642 0 3 782,346,221, 0,798,1189, -,-,-, 666481 Satellite W-chromosome 585 chrUn_NT_468426v1 7814 9559 GGXHOI 319 - 7814 9559 0 3 163,397,1102, 0,220,643, -,-,-, 666482 Satellite W-chromosome 585 chrUn_NT_468426v1 9910 11404 GGXHOI 338 - 9910 11404 0 2 649,830, 0,664, -,-, 666484 Satellite W-chromosome 585 chrUn_NT_468428v1 2306 2964 GGLTR11-int 445 - 2306 2964 0 2 316,125, 0,533, -,-, 666487 LTR ERV1 585 chrUn_NT_468429v1 4932 11406 GGXHOI 366 - 4932 11406 0 11 1488,824,126,225,725,1021,160,95,920,465,167, 0,1530,2395,2556,2811,3552,4590,4773,4880,5821,6307, -,-,-,-,-,-,-,-,-,-,-, 666497 Satellite W-chromosome 585 chrUn_NT_468432v1 10305 10538 (CTCTATGGGG)n 536 + 10305 10538 0 2 109,113, 0,120, +,+, 666525 Satellite Satellite 585 chrUn_NT_468434v1 3404 3810 GGXHOI 591 - 3404 3810 0 2 247,148, 0,258, -,-, 666534 Satellite W-chromosome 585 chrUn_NT_468434v1 4114 7433 GGXHOI 580 - 4114 7433 0 5 247,147,404,148,1108, 0,258,957,1372,2211, -,-,-,-,-, 666536 Satellite W-chromosome 585 chrUn_NT_468434v1 7474 9004 GGXHOI 590 - 7474 9004 0 4 243,148,202,148, 0,256,1169,1382, -,-,-,-, 666540 Satellite W-chromosome 585 chrUn_NT_468434v1 9707 11395 GGXHOI 560 - 9707 11395 0 3 222,372,278, 0,990,1410, -,-,-, 666543 Satellite W-chromosome 585 chrUn_NT_468439v1 117 979 CR1-F 549 + 117 979 0 3 177,154,199, 0,221,663, +,+,+, 666599 LINE CR1 585 chrUn_NT_468439v1 1244 1591 CR1-F 628 + 1244 1591 0 2 178,93, 0,254, +,+, 666602 LINE CR1 585 chrUn_NT_468439v1 1873 2342 CR1-F 446 + 1873 2342 0 2 205,218, 0,251, +,+, 666604 LINE CR1 585 chrUn_NT_468439v1 2387 3433 CR1-F 529 + 2387 3433 0 4 203,210,171,49, 0,245,754,997, +,+,+,+, 666605 LINE CR1 585 chrUn_NT_468439v1 3478 4365 CR1-F 568 + 3478 4365 0 3 203,200,177, 0,245,710, +,+,+, 666607 LINE CR1 585 chrUn_NT_468439v1 4409 4935 CR1-F 650 + 4409 4935 0 3 178,156,92, 0,223,434, +,+,+, 666609 LINE CR1 585 chrUn_NT_468439v1 4977 5648 CR1-F 580 + 4977 5648 0 3 204,204,179, 0,246,492, +,+,+, 666610 LINE CR1 585 chrUn_NT_468439v1 5692 6095 CR1-F 710 + 5692 6095 0 2 165,189, 0,214, +,+, 666611 LINE CR1 585 chrUn_NT_468439v1 6137 8693 CR1-F 517 + 6137 8693 0 7 198,202,203,203,154,201,177, 0,497,741,986,1456,1902,2379, +,+,+,+,+,+,+, 666612 LINE CR1 585 chrUn_NT_468439v1 8737 11204 CR1-F 550 + 8737 11204 0 8 172,186,170,186,204,155,200,173, 0,217,445,668,896,1367,1813,2294, +,+,+,+,+,+,+,+, 666617 LINE CR1 585 chrUn_NT_468440v1 1466 2717 CR1-H 585 - 1466 2717 0 2 117,1134, 0,117, -,-, 666623 LINE CR1 585 chrUn_NT_468442v1 3852 6318 GGLTR7-int 594 + 3852 6318 0 2 338,794, 0,1672, +,+, 666632 LTR ERV1 585 chrUn_NT_468442v1 6330 8712 GGERV10_LTR 874 - 6330 8712 0 2 38,41, 0,2341, -,-, 666635 LTR ERVL 585 chrUn_NT_468442v1 6496 8670 GGLTR10D-int 888 - 6496 8670 0 2 363,1808, 0,366, -,-, 666636 LTR ERVK 585 chrUn_NT_468442v1 9147 9839 (CGAGG)n 475 + 9147 9839 0 2 477,188, 0,504, +,+, 666639 Simple_repeat Simple_repeat 585 chrUn_NT_468442v1 10439 11087 (CGAGG)n 506 + 10439 11087 0 2 193,276, 0,372, +,+, 666643 Simple_repeat Simple_repeat 585 chrUn_NT_468445v1 10364 11386 GGLTR3F1 936 + 10364 11386 0 2 842,177, 0,845, +,+, 666714 LTR ERVL 585 chrUn_NT_468447v1 1133 1384 GGLTR11 627 + 1133 1384 0 2 100,151, 0,100, +,+, 666727 LTR ERV1 585 chrUn_NT_468447v1 9821 10057 CR1-E 695 - 9821 10057 0 2 105,103, 0,133, -,-, 666736 LINE CR1 585 chrUn_NT_468448v1 382 1363 CR1-B2 618 - 382 1363 0 3 506,247,223, 0,508,758, -,-,-, 666741 LINE CR1 585 chrUn_NT_468448v1 7447 8573 CR1-B2 684 - 7447 8573 0 2 896,227, 0,899, -,-, 666749 LINE CR1 585 chrUn_NT_468450v1 4030 4869 GGXHOI 342 + 4030 4869 0 2 509,271, 0,568, +,+, 666759 Satellite W-chromosome 585 chrUn_NT_468450v1 5819 6524 GGXHOI 348 + 5819 6524 0 2 512,176, 0,529, +,+, 666761 Satellite W-chromosome 585 chrUn_NT_468450v1 7358 8287 GGXHOI 388 + 7358 8287 0 2 350,516, 0,413, +,+, 666763 Satellite W-chromosome 585 chrUn_NT_468450v1 10149 11367 GGXHOI 330 + 10149 11367 0 2 537,619, 0,599, +,+, 666767 Satellite W-chromosome 585 chrUn_NT_468451v1 579 3189 GGXHOI 367 - 579 3189 0 3 1985,268,326, 0,2004,2284, -,-,-, 666769 Satellite W-chromosome 585 chrUn_NT_468451v1 3311 5144 GGXHOI 364 - 3311 5144 0 2 240,1548, 0,285, -,-, 666770 Satellite W-chromosome 585 chrUn_NT_468451v1 5413 5817 (CGAGG)n 557 + 5413 5817 0 2 188,216, 0,188, +,+, 666772 Simple_repeat Simple_repeat 585 chrUn_NT_468451v1 7632 8434 (CCTTG)n 596 + 7632 8434 0 2 185,611, 0,191, +,+, 666778 Simple_repeat Simple_repeat 585 chrUn_NT_468451v1 8939 9369 (GCCTG)n 514 + 8939 9369 0 2 200,52, 0,378, +,+, 666783 Simple_repeat Simple_repeat 585 chrUn_NT_468451v1 9139 9583 (CCTTG)n 603 + 9139 9583 0 2 178,266, 0,178, +,+, 666784 Simple_repeat Simple_repeat 585 chrUn_NT_468451v1 9588 10319 (CCTTG)n 585 + 9588 10319 0 3 296,229,201, 0,301,530, +,+,+, 666785 Simple_repeat Simple_repeat 585 chrUn_NT_468451v1 10372 11025 (CCTTG)n 584 + 10372 11025 0 3 191,270,192, 0,191,461, +,+,+, 666787 Simple_repeat Simple_repeat 585 chrUn_NT_468452v1 5156 6281 GGXHOI 365 - 5156 6281 0 3 515,263,270, 0,572,855, -,-,-, 666798 Satellite W-chromosome 585 chrUn_NT_468452v1 7607 9116 GGXHOI 341 - 7607 9116 0 3 268,587,543, 0,325,966, -,-,-, 666800 Satellite W-chromosome 585 chrUn_NT_468452v1 9993 10945 GGXHOI 314 - 9993 10945 0 2 690,205, 0,747, -,-, 666802 Satellite W-chromosome 585 chrUn_NT_468455v1 1934 2631 CR1-B2 698 - 1934 2631 0 2 469,225, 0,472, -,-, 666808 LINE CR1 585 chrUn_NT_468457v1 5263 11041 GGLTR3F1 820 + 5263 11041 0 2 490,5286, 0,492, +,+, 666824 LTR ERVL 585 chrUn_NT_468457v1 11041 11354 GGLTR3F1 880 + 11041 11354 0 2 36,277, 0,36, +,+, 666825 LTR ERVL 585 chrUn_NT_468459v1 206 2670 CR1-F 574 + 206 2670 0 8 182,155,201,179,153,201,203,182, 0,226,669,1137,1360,1798,2037,2282, +,+,+,+,+,+,+,+, 666841 LINE CR1 585 chrUn_NT_468459v1 2714 4586 CR1-F 606 + 2714 4586 0 7 178,190,200,203,204,204,180, 0,223,455,955,1200,1446,1692, +,+,+,+,+,+,+, 666845 LINE CR1 585 chrUn_NT_468459v1 4630 6500 CR1-F 603 + 4630 6500 0 7 177,191,200,203,203,204,179, 0,222,455,955,1200,1445,1691, +,+,+,+,+,+,+, 666847 LINE CR1 585 chrUn_NT_468459v1 6544 7665 CR1-F 660 + 6544 7665 0 4 177,188,200,175, 0,222,453,946, +,+,+,+, 666849 LINE CR1 585 chrUn_NT_468459v1 7707 8116 CR1-F 717 + 7707 8116 0 2 183,186, 0,223, +,+, 666851 LINE CR1 585 chrUn_NT_468459v1 8155 9493 CR1-F 578 + 8155 9493 0 5 179,155,202,204,180, 0,223,668,912,1158, +,+,+,+,+, 666852 LINE CR1 585 chrUn_NT_468459v1 9537 11349 CR1-F 598 + 9537 11349 0 7 177,191,200,203,203,202,123, 0,222,455,955,1200,1445,1689, +,+,+,+,+,+,+, 666854 LINE CR1 585 chrUn_NT_468460v1 356 709 (ACCCATAGGG)n 614 + 356 709 0 2 101,112, 0,241, +,+, 666857 Satellite Satellite 585 chrUn_NT_468460v1 457 966 (ACCCCATAGGG)n 469 + 457 966 0 2 140,369, 0,140, +,+, 666858 Satellite Satellite 585 chrUn_NT_468460v1 946 1213 (ACCCATAGGG)n 659 + 946 1213 0 2 122,142, 0,125, +,+, 666859 Satellite Satellite 585 chrUn_NT_468460v1 1358 2246 (ACCCATAGGG)n 602 - 1358 2246 0 4 102,53,71,87, 0,309,480,801, -,-,-,-, 666861 Satellite Satellite 585 chrUn_NT_468460v1 1460 1667 (ACCCCATAGGG)n 551 + 1460 1667 0 2 122,85, 0,122, +,+, 666862 Satellite Satellite 585 chrUn_NT_468460v1 2587 3167 (ACCCATAGGG)n 611 + 2587 3167 0 2 437,140, 0,440, +,+, 666868 Satellite Satellite 585 chrUn_NT_468461v1 6692 7673 GGXHOI 351 - 6692 7673 0 3 230,211,468, 0,282,513, -,-,-, 666889 Satellite W-chromosome 585 chrUn_NT_468462v1 9777 10374 CR1-G 502 + 9777 10374 0 2 449,118, 0,479, +,+, 666903 LINE CR1 585 chrUn_NT_468464v1 837 6104 GGXHOI 357 - 837 6104 0 4 1920,2028,719,555, 0,1935,3981,4712, -,-,-,-, 666951 Satellite W-chromosome 585 chrUn_NT_468464v1 6184 9687 GGXHOI 369 - 6184 9687 0 6 334,897,88,403,1044,662, 0,350,1263,1368,1783,2841, -,-,-,-,-,-, 666952 Satellite W-chromosome 585 chrUn_NT_468464v1 9773 11168 GGXHOI 369 - 9773 11168 0 2 563,807, 0,588, -,-, 666953 Satellite W-chromosome 585 chrUn_NT_468465v1 510 3164 GGLTR3F1 902 - 510 3164 0 2 467,2187, 0,467, -,-, 666956 LTR ERVL 585 chrUn_NT_468465v1 3150 5388 GGERVL-A-int 800 - 3150 5388 0 3 561,494,1182, 0,562,1056, -,-,-, 666957 LTR ERVL 585 chrUn_NT_468465v1 5884 11290 GGXHOI 443 + 5884 11290 0 4 1470,1012,2117,750, 0,1492,2520,4656, +,+,+,+, 666959 Satellite W-chromosome 585 chrUn_NT_468466v1 1679 3005 GGXHOI 329 + 1679 3005 0 3 119,502,653, 0,154,673, +,+,+, 666962 Satellite W-chromosome 585 chrUn_NT_468466v1 3175 6697 GGXHOI 377 - 3175 6697 0 3 1119,1807,561, 0,1137,2961, -,-,-, 666965 Satellite W-chromosome 585 chrUn_NT_468466v1 8905 10342 GGXHOI 398 + 8905 10342 0 4 443,71,431,417, 0,460,542,1020, +,+,+,+, 666969 Satellite W-chromosome 585 chrUn_NT_468468v1 6653 7222 (CAGGC)n 543 + 6653 7222 0 3 119,76,180, 0,296,389, +,+,+, 666985 Simple_repeat Simple_repeat 585 chrUn_NT_468468v1 7278 7641 (CAGGC)n 382 + 7278 7641 0 2 98,80, 0,283, +,+, 666989 Simple_repeat Simple_repeat 585 chrUn_NT_468468v1 7754 8424 (CAGGC)n 500 + 7754 8424 0 3 172,191,209, 0,227,461, +,+,+, 666993 Simple_repeat Simple_repeat 585 chrUn_NT_468468v1 8395 10028 (CAAGG)n 590 + 8395 10028 0 5 193,235,142,232,232, 0,232,653,817,1401, +,+,+,+,+, 666994 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 660 1350 (CCTTG)n 538 + 660 1350 0 3 85,33,385, 0,268,305, +,+,+, 667004 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 2544 3475 (CAAGG)n 535 + 2544 3475 0 4 336,193,176,183, 0,336,548,748, +,+,+,+, 667012 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 3617 4469 (CCTTG)n 479 + 3617 4469 0 3 234,376,193, 0,251,659, +,+,+, 667014 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 4951 6015 (CAAGG)n 454 + 4951 6015 0 4 140,315,199,356, 0,162,477,708, +,+,+,+, 667016 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 6152 6739 (CCTTG)n 473 + 6152 6739 0 3 200,100,49, 0,257,538, +,+,+, 667018 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 6806 7045 (CCTTG)n 529 + 6806 7045 0 2 186,23, 0,216, +,+, 667020 Simple_repeat Simple_repeat 585 chrUn_NT_468469v1 8785 9602 GGXHOI 369 - 8785 9602 0 2 473,301, 0,516, -,-, 667025 Satellite W-chromosome 585 chrUn_NT_468469v1 9786 11314 GGXHOI 387 - 9786 11314 0 2 516,994, 0,534, -,-, 667026 Satellite W-chromosome 585 chrUn_NT_468470v1 1106 2146 GGXHOI 398 + 1106 2146 0 3 577,279,136, 0,601,904, +,+,+, 667028 Satellite W-chromosome 585 chrUn_NT_468470v1 2512 2833 GGXHOI 366 + 2512 2833 0 2 161,140, 0,181, +,+, 667030 Satellite W-chromosome 585 chrUn_NT_468470v1 3342 4711 GGXHOI 372 + 3342 4711 0 4 608,384,157,148, 0,647,1048,1221, +,+,+,+, 667032 Satellite W-chromosome 585 chrUn_NT_468470v1 4787 6250 GGXHOI 415 + 4787 6250 0 5 234,194,544,232,183, 0,245,478,1035,1280, +,+,+,+,+, 667033 Satellite W-chromosome 585 chrUn_NT_468470v1 6318 8446 GGXHOI 421 + 6318 8446 0 6 147,215,222,610,432,377, 0,168,413,654,1280,1751, +,+,+,+,+,+, 667034 Satellite W-chromosome 585 chrUn_NT_468470v1 8520 9506 GGXHOI 377 + 8520 9506 0 2 234,702, 0,284, +,+, 667035 Satellite W-chromosome 585 chrUn_NT_468470v1 9800 10990 GGXHOI 393 + 9800 10990 0 2 913,260, 0,930, +,+, 667036 Satellite W-chromosome 585 chrUn_NT_468470v1 11054 11327 GGXHOI 346 + 11054 11327 0 2 136,113, 0,160, +,+, 667037 Satellite W-chromosome 585 chrUn_NT_468471v1 6292 11324 Z-REP 823 - 6292 11324 0 3 74,4686,136, 0,149,4896, -,-,-, 667043 Satellite macro 585 chrUn_NT_468475v1 1123 2909 GGXHOI 339 - 1123 2909 0 2 1548,176, 0,1610, -,-, 667051 Satellite W-chromosome 585 chrUn_NT_468475v1 2990 4574 GGXHOI 284 - 2990 4574 0 3 168,852,489, 0,221,1095, -,-,-, 667052 Satellite W-chromosome 585 chrUn_NT_468475v1 6761 7618 GGXHOI 319 - 6761 7618 0 2 415,415, 0,442, -,-, 667057 Satellite W-chromosome 585 chrUn_NT_468475v1 8559 9513 GGXHOI 332 - 8559 9513 0 3 299,267,319, 0,351,635, -,-,-, 667060 Satellite W-chromosome 585 chrUn_NT_468476v1 4464 9789 GGXHOI 359 - 4464 9789 0 4 697,3500,897,144, 0,711,4227,5181, -,-,-,-, 667065 Satellite W-chromosome 585 chrUn_NT_468477v1 632 1174 GGXHOI 324 + 632 1174 0 2 354,142, 0,400, +,+, 667070 Satellite W-chromosome 585 chrUn_NT_468477v1 4325 5279 GGXHOI 372 + 4325 5279 0 2 377,515, 0,439, +,+, 667075 Satellite W-chromosome 585 chrUn_NT_468479v1 5240 6706 GGXHOI 354 - 5240 6706 0 2 932,472, 0,994, -,-, 667092 Satellite W-chromosome 585 chrUn_NT_468480v1 1577 2366 (CCTTG)n 458 + 1577 2366 0 3 187,315,189, 0,229,600, +,+,+, 667104 Simple_repeat Simple_repeat 585 chrUn_NT_468480v1 7701 8889 GGXHOI 363 - 7701 8889 0 2 519,613, 0,575, -,-, 667114 Satellite W-chromosome 585 chrUn_NT_468480v1 10232 10891 (CCTTG)n 517 + 10232 10891 0 2 259,383, 0,276, +,+, 667118 Simple_repeat Simple_repeat 585 chrUn_NT_468481v1 1541 1775 G-rich 437 + 1541 1775 0 2 35,144, 0,90, +,+, 667124 Low_complexity Low_complexity 585 chrUn_NT_468481v1 5952 6174 (GT)n 715 + 5952 6174 0 2 75,147, 0,75, +,+, 667130 Simple_repeat Simple_repeat 585 chrUn_NT_468484v1 10680 11233 CR1-H 851 - 10680 11233 0 2 49,357, 0,196, -,-, 667204 LINE CR1 585 chrUn_NT_468485v1 6701 9821 GGXHOI 565 - 6701 9821 0 4 36,66,54,1410, 0,944,1053,1710, -,-,-,-, 667214 Satellite W-chromosome 585 chrUn_NT_468485v1 9072 11288 Sat-CR1_GG 182 - 9072 11288 0 2 815,547, 0,1669, -,-, 667217 Satellite Satellite 585 chrUn_NT_468486v1 945 9578 GGXHOI 455 + 945 9578 0 7 808,2084,2506,714,388,1134,880, 0,819,2926,5447,6185,6595,7753, +,+,+,+,+,+,+, 667222 Satellite W-chromosome 585 chrUn_NT_468486v1 9686 11258 GGXHOI 408 + 9686 11258 0 3 573,503,458, 0,594,1114, +,+,+, 667223 Satellite W-chromosome 585 chrUn_NT_468488v1 946 1726 GGXHOI 356 - 946 1726 0 4 136,136,265,133, 0,185,365,647, -,-,-,-, 667226 Satellite W-chromosome 585 chrUn_NT_468488v1 1806 2095 GGXHOI 469 - 1806 2095 0 2 139,89, 0,200, -,-, 667227 Satellite W-chromosome 585 chrUn_NT_468488v1 2255 3716 GGXHOI 380 - 2255 3716 0 6 138,154,186,479,236,167, 0,153,321,524,1043,1294, -,-,-,-,-,-, 667228 Satellite W-chromosome 585 chrUn_NT_468488v1 4107 4684 GGXHOI 310 - 4107 4684 0 2 302,228, 0,349, -,-, 667230 Satellite W-chromosome 585 chrUn_NT_468488v1 5107 6665 GGXHOI 405 - 5107 6665 0 4 316,252,613,309, 0,352,620,1249, -,-,-,-, 667231 Satellite W-chromosome 585 chrUn_NT_468488v1 6979 7907 GGXHOI 379 - 6979 7907 0 3 134,406,331, 0,173,597, -,-,-, 667233 Satellite W-chromosome 585 chrUn_NT_468488v1 8037 9520 GGXHOI 405 - 8037 9520 0 2 1148,279, 0,1204, -,-, 667234 Satellite W-chromosome 585 chrUn_NT_468488v1 9892 11299 GGXHOI 362 - 9892 11299 0 4 516,536,134,140, 0,563,1115,1267, -,-,-,-, 667236 Satellite W-chromosome 585 chrUn_NT_468491v1 8344 8775 (CCCCATTGGG)n 394 + 8344 8775 0 2 122,280, 0,151, +,+, 667261 Satellite Satellite 585 chrUn_NT_468491v1 9213 9847 (ACCCCATAGGG)n 511 + 9213 9847 0 3 174,268,126, 0,198,508, +,+,+, 667263 Satellite Satellite 585 chrUn_NT_468493v1 4057 5555 GGLTR7B 581 + 4057 5555 0 2 891,114, 0,1384, +,+, 667276 LTR ERV1 585 chrUn_NT_468494v1 10548 10979 (CCTTG)n 483 + 10548 10979 0 2 226,186, 0,245, +,+, 667303 Simple_repeat Simple_repeat 585 chrUn_NT_468495v1 814 5228 GGXHOI 560 - 814 5228 0 3 286,367,1849, 0,1819,2565, -,-,-, 667308 Satellite W-chromosome 585 chrUn_NT_468495v1 5248 7790 GGXHOI 580 - 5248 7790 0 2 147,1647, 0,895, -,-, 667312 Satellite W-chromosome 585 chrUn_NT_468497v1 5937 7800 GGXHOI 371 - 5937 7800 0 3 705,657,446, 0,720,1417, -,-,-, 667329 Satellite W-chromosome 585 chrUn_NT_468497v1 7899 11286 GGXHOI 419 - 7899 11286 0 4 358,130,419,2373, 0,375,542,1014, -,-,-,-, 667330 Satellite W-chromosome 585 chrUn_NT_468498v1 5958 6772 GGXHOI 363 + 5958 6772 0 3 138,116,533, 0,149,281, +,+,+, 667336 Satellite W-chromosome 585 chrUn_NT_468498v1 7205 11262 GGXHOI 399 + 7205 11262 0 9 1336,250,197,302,741,294,261,168,189, 0,1378,1653,1868,2186,2981,3331,3642,3868, +,+,+,+,+,+,+,+,+, 667337 Satellite W-chromosome 585 chrUn_NT_468499v1 1434 5939 GGXHOI 582 + 1434 5939 0 5 386,592,1480,1182,120, 0,435,1251,2955,4385, +,+,+,+,+, 667341 Satellite W-chromosome 585 chrUn_NT_468499v1 6037 7966 GGXHOI 568 + 6037 7966 0 2 1204,227, 0,1702, +,+, 667345 Satellite W-chromosome 585 chrUn_NT_468499v1 8032 11095 GGXHOI 561 + 8032 11095 0 5 547,592,111,1004,235, 0,597,1413,1805,2828, +,+,+,+,+, 667347 Satellite W-chromosome 585 chrUn_NT_468500v1 8587 9053 GGLTR3E1 553 + 8587 9053 0 2 240,204, 0,262, +,+, 667358 LTR ERVL 585 chrUn_NT_468502v1 5255 6306 GGXHOI 378 - 5255 6306 0 2 516,472, 0,579, -,-, 667372 Satellite W-chromosome 585 chrUn_NT_468503v1 10285 11263 GGXHOI 430 - 10285 11263 0 2 659,305, 0,673, -,-, 667382 Satellite W-chromosome 585 chrUn_NT_468508v1 2259 2892 (CAAGG)n 566 + 2259 2892 0 2 335,116, 0,517, +,+, 667406 Simple_repeat Simple_repeat 585 chrUn_NT_468508v1 3701 7264 GGLTR7A 529 - 3701 7264 0 2 324,3149, 0,414, -,-, 667412 LTR ERV1 585 chrUn_NT_468508v1 10370 11268 (CAAGG)n 696 + 10370 11268 0 2 409,211, 0,687, +,+, 667433 Simple_repeat Simple_repeat 585 chrUn_NT_468509v1 1534 3164 CR1-Y2 386 - 1534 3164 0 2 11,120, 0,1510, -,-, 667438 LINE CR1 585 chrUn_NT_468509v1 1617 1792 CR1-F2 401 - 1617 1792 0 2 93,82, 0,93, -,-, 667439 LINE CR1 585 chrUn_NT_468509v1 3698 3883 CR1-Y4 483 - 3698 3883 0 2 90,66, 0,119, -,-, 667447 LINE CR1 585 chrUn_NT_468509v1 4013 4168 CR1-Y2 628 - 4013 4168 0 2 67,69, 0,86, -,-, 667449 LINE CR1 585 chrUn_NT_468510v1 3272 4594 GGXHOI 381 - 3272 4594 0 2 994,276, 0,1046, -,-, 667478 Satellite W-chromosome 585 chrUn_NT_468510v1 6601 11269 GGXHOI 340 - 6601 11269 0 7 1341,576,663,494,668,548,133, 0,1365,1993,2676,3195,3925,4535, -,-,-,-,-,-,-, 667482 Satellite W-chromosome 585 chrUn_NT_468511v1 5679 5789 (AGCAA)n 304 + 5679 5789 0 2 20,52, 0,58, +,+, 667490 Simple_repeat Simple_repeat 585 chrUn_NT_468511v1 7520 11270 CR1-F2 586 + 7520 11270 0 5 1155,113,255,83,101, 0,1155,3240,3566,3649, +,+,+,+,+, 667493 LINE CR1 585 chrUn_NT_468512v1 9464 11268 GGXHOI 528 + 9464 11268 0 4 496,339,445,11, 0,536,921,1793, +,+,+,+, 667512 Satellite W-chromosome 585 chrUn_NT_468513v1 7138 7544 GGERVK10-int 284 + 7138 7544 0 2 88,144, 0,262, +,+, 667518 LTR ERVK 585 chrUn_NT_468514v1 1360 1924 GGERVL-C-int 889 - 1360 1924 0 2 527,37, 0,527, -,-, 667522 LTR ERVL 585 chrUn_NT_468514v1 3532 3949 GGLTR7A 722 + 3532 3949 0 2 217,200, 0,217, +,+, 667525 LTR ERV1 585 chrUn_NT_468514v1 6075 7814 CR1-E 772 - 6075 7814 0 3 244,278,156, 0,244,1583, -,-,-, 667528 LINE CR1 585 chrUn_NT_468514v1 8160 11270 GGLTR7A 813 - 8160 11270 0 2 600,2510, 0,600, -,-, 667530 LTR ERV1 585 chrUn_NT_468516v1 1812 3514 GGXHOI 368 - 1812 3514 0 2 659,996, 0,706, -,-, 667534 Satellite W-chromosome 585 chrUn_NT_468516v1 4437 7758 GGXHOI 393 - 4437 7758 0 3 1786,524,937, 0,1832,2384, -,-,-, 667536 Satellite W-chromosome 585 chrUn_NT_468516v1 7878 9283 GGXHOI 397 - 7878 9283 0 3 413,272,661, 0,457,744, -,-,-, 667537 Satellite W-chromosome 585 chrUn_NT_468516v1 9447 11199 GGXHOI 353 - 9447 11199 0 2 1579,111, 0,1641, -,-, 667538 Satellite W-chromosome 585 chrUn_NT_468517v1 1022 3682 GGXHOI 400 - 1022 3682 0 3 1610,436,569, 0,1623,2091, -,-,-, 667540 Satellite W-chromosome 585 chrUn_NT_468517v1 3791 11259 GGXHOI 385 - 3791 11259 0 6 224,1098,1994,2461,1311,266, 0,256,1378,3387,5870,7202, -,-,-,-,-,-, 667541 Satellite W-chromosome 585 chrUn_NT_468518v1 1820 1929 (TTTGC)n 326 + 1820 1929 0 2 52,8, 0,101, +,+, 667543 Simple_repeat Simple_repeat 585 chrUn_NT_468518v1 10140 10770 CR1-H 666 - 10140 10770 0 2 139,482, 0,148, -,-, 667552 LINE CR1 585 chrUn_NT_468519v1 2072 2699 CR1-H 662 + 2072 2699 0 2 480,141, 0,486, +,+, 667554 LINE CR1 585 chrUn_NT_468520v1 5036 5652 CR1-H 664 - 5036 5652 0 2 140,470, 0,146, -,-, 667565 LINE CR1 585 chrUn_NT_468520v1 8175 8630 CR1-H 649 - 8175 8630 0 2 159,296, 0,159, -,-, 667569 LINE CR1 585 chrUn_NT_468521v1 7644 9438 GGXHOI 389 - 7644 9438 0 3 480,361,921, 0,496,873, -,-,-, 667573 Satellite W-chromosome 585 chrUn_NT_468521v1 9603 11256 GGXHOI 370 - 9603 11256 0 5 230,832,271,177,48, 0,258,1106,1389,1605, -,-,-,-,-, 667574 Satellite W-chromosome 585 chrUn_NT_468523v1 8533 11228 GGXHOI 479 - 8533 11228 0 4 148,1094,1304,64, 0,164,1274,2631, -,-,-,-, 667587 Satellite W-chromosome 585 chrUn_NT_468524v1 4022 5145 CR1-B2 705 - 4022 5145 0 2 895,225, 0,898, -,-, 667592 LINE CR1 585 chrUn_NT_468524v1 10449 10934 CR1-F 700 + 10449 10934 0 2 264,166, 0,319, +,+, 667596 LINE CR1 585 chrUn_NT_468525v1 107 5032 CR1-F 532 + 107 5032 0 15 187,196,197,201,202,155,199,190,200,203,203,204,155,200,190, 0,229,723,962,1205,1673,2118,2362,2591,3090,3335,3580,4050,4489,4735, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 667598 LINE CR1 585 chrUn_NT_468525v1 5074 8413 CR1-F 516 + 5074 8413 0 10 202,204,202,205,155,201,191,201,205,204, 0,503,749,992,1461,1907,2153,2387,2888,3135, +,+,+,+,+,+,+,+,+,+, 667605 LINE CR1 585 chrUn_NT_468526v1 1628 2059 GGXHOI 423 - 1628 2059 0 2 240,147, 0,284, -,-, 667615 Satellite W-chromosome 585 chrUn_NT_468526v1 2123 2442 GGXHOI 326 - 2123 2442 0 2 142,166, 0,153, -,-, 667616 Satellite W-chromosome 585 chrUn_NT_468526v1 2588 6022 GGXHOI 367 - 2588 6022 0 2 1262,2150, 0,1284, -,-, 667617 Satellite W-chromosome 585 chrUn_NT_468526v1 6286 11199 GGXHOI 385 - 6286 11199 0 7 256,888,1000,363,1413,406,359, 0,314,1222,2239,2647,4104,4554, -,-,-,-,-,-,-, 667618 Satellite W-chromosome 585 chrUn_NT_468527v1 190 592 (CGAGG)n 570 + 190 592 0 2 183,173, 0,229, +,+, 667620 Simple_repeat Simple_repeat 585 chrUn_NT_468527v1 1784 3015 (CGAGG)n 535 + 1784 3015 0 4 176,148,165,349, 0,193,537,882, +,+,+,+, 667625 Simple_repeat Simple_repeat 585 chrUn_NT_468527v1 3016 3306 (CCTCG)n 516 + 3016 3306 0 2 94,183, 0,107, +,+, 667628 Simple_repeat Simple_repeat 585 chrUn_NT_468527v1 4183 5600 (CCTCG)n 524 + 4183 5600 0 3 425,581,216, 0,438,1201, +,+,+, 667630 Simple_repeat Simple_repeat 585 chrUn_NT_468527v1 7843 10723 (CCTCG)n 525 + 7843 10723 0 5 836,175,771,181,799, 0,847,1056,1851,2081, +,+,+,+,+, 667640 Simple_repeat Simple_repeat 585 chrUn_NT_468528v1 7538 9911 GGXHOI 417 + 7538 9911 0 3 703,277,1360, 0,725,1013, +,+,+, 667648 Satellite W-chromosome 585 chrUn_NT_468531v1 2468 4601 GGXHOI 376 - 2468 4601 0 2 1621,455, 0,1678, -,-, 667663 Satellite W-chromosome 585 chrUn_NT_468531v1 6146 7900 GGXHOI 371 - 6146 7900 0 3 813,454,406, 0,851,1348, -,-,-, 667666 Satellite W-chromosome 585 chrUn_NT_468531v1 8524 11173 GGXHOI 388 - 8524 11173 0 6 360,440,440,523,439,271, 0,380,840,1339,1882,2378, -,-,-,-,-,-, 667668 Satellite W-chromosome 585 chrUn_NT_468532v1 5424 11224 Z-REP 903 - 5424 11224 0 2 5501,288, 0,5512, -,-, 667674 Satellite macro 585 chrUn_NT_468533v1 6061 6810 (CCCTAA)n 601 + 6061 6810 0 3 132,21,381, 0,334,368, +,+,+, 667676 Simple_repeat Simple_repeat 585 chrUn_NT_468533v1 6834 7651 (CCCTAA)n 568 + 6834 7651 0 4 174,185,120,175, 0,203,388,642, +,+,+,+, 667679 Simple_repeat Simple_repeat 585 chrUn_NT_468533v1 7721 8691 (CCCTAA)n 620 + 7721 8691 0 3 232,51,162, 0,545,808, +,+,+, 667682 Simple_repeat Simple_repeat 585 chrUn_NT_468533v1 8764 9568 (CCCTAA)n 567 + 8764 9568 0 3 283,53,279, 0,461,525, +,+,+, 667686 Simple_repeat Simple_repeat 585 chrUn_NT_468533v1 9852 11223 GGXHOI 349 + 9852 11223 0 3 986,76,238, 0,1025,1133, +,+,+, 667689 Satellite W-chromosome 585 chrUn_NT_468534v1 10138 11155 GGLTR7-int 258 - 10138 11155 0 2 278,694, 0,323, -,-, 667697 LTR ERV1 585 chrUn_NT_468536v1 2154 8782 GGXHOI 371 + 2154 8782 0 7 1032,614,630,585,1508,1354,780, 0,1047,1673,2331,2959,4478,5848, +,+,+,+,+,+,+, 667719 Satellite W-chromosome 585 chrUn_NT_468536v1 8991 11220 GGXHOI 356 + 8991 11220 0 4 1112,587,224,203, 0,1134,1744,2026, +,+,+,+, 667720 Satellite W-chromosome 585 chrUn_NT_468538v1 6265 6722 CR1-H 677 + 6265 6722 0 2 296,161, 0,296, +,+, 667741 LINE CR1 585 chrUn_NT_468538v1 10154 10776 CR1-H 684 + 10154 10776 0 2 484,138, 0,484, +,+, 667745 LINE CR1 585 chrUn_NT_468539v1 6156 8266 GGXHOI 378 - 6156 8266 0 2 1006,1042, 0,1068, -,-, 667755 Satellite W-chromosome 585 chrUn_NT_468539v1 10069 11186 GGXHOI 346 - 10069 11186 0 2 513,544, 0,573, -,-, 667758 Satellite W-chromosome 585 chrUn_NT_468540v1 7302 7792 GGXHOI 344 + 7302 7792 0 2 152,287, 0,203, +,+, 667763 Satellite W-chromosome 585 chrUn_NT_468540v1 8145 8887 GGXHOI 333 + 8145 8887 0 3 266,158,272, 0,288,470, +,+,+, 667765 Satellite W-chromosome 585 chrUn_NT_468540v1 9755 10377 GGXHOI 399 + 9755 10377 0 2 133,429, 0,193, +,+, 667767 Satellite W-chromosome 585 chrUn_NT_468541v1 1582 1809 (CTCTATGGGG)n 555 + 1582 1809 0 2 117,97, 0,130, +,+, 667772 Satellite Satellite 585 chrUn_NT_468541v1 2771 3028 (CTCTATGGGG)n 538 + 2771 3028 0 2 117,117, 0,140, +,+, 667774 Satellite Satellite 585 chrUn_NT_468541v1 4386 4853 (CTCTATGGGG)n 526 + 4386 4853 0 2 117,317, 0,150, +,+, 667777 Satellite Satellite 585 chrUn_NT_468541v1 10451 10668 (CTCTATGGGG)n 670 + 10451 10668 0 2 53,42, 0,175, +,+, 667785 Satellite Satellite 585 chrUn_NT_468541v1 10504 11090 (ACCCATAGAG)n 707 - 10504 11090 0 3 122,104,236, 0,124,350, -,-,-, 667786 Satellite Satellite 585 chrUn_NT_468544v1 1287 3225 GGXHOI 379 - 1287 3225 0 3 1249,137,456, 0,1295,1482, -,-,-, 667834 Satellite W-chromosome 585 chrUn_NT_468544v1 3546 3984 GGXHOI 307 - 3546 3984 0 2 139,259, 0,179, -,-, 667836 Satellite W-chromosome 585 chrUn_NT_468544v1 4203 5122 GGXHOI 274 - 4203 5122 0 2 817,89, 0,830, -,-, 667837 Satellite W-chromosome 585 chrUn_NT_468544v1 5253 5663 GGXHOI 429 - 5253 5663 0 2 139,255, 0,155, -,-, 667838 Satellite W-chromosome 585 chrUn_NT_468544v1 5843 6126 GGXHOI 282 - 5843 6126 0 2 127,139, 0,144, -,-, 667839 Satellite W-chromosome 585 chrUn_NT_468544v1 6293 7127 GGXHOI 431 - 6293 7127 0 3 468,144,171, 0,506,663, -,-,-, 667840 Satellite W-chromosome 585 chrUn_NT_468544v1 7199 8545 GGXHOI 340 - 7199 8545 0 5 172,168,295,354,245, 0,200,408,715,1101, -,-,-,-,-, 667841 Satellite W-chromosome 585 chrUn_NT_468546v1 5918 6011 (C)n 736 + 5918 6011 0 2 28,30, 0,63, +,+, 667860 Simple_repeat Simple_repeat 585 chrUn_NT_468548v1 10704 10941 (ACCCATAGGG)n 500 + 10704 10941 0 2 122,102, 0,135, +,+, 667883 Satellite Satellite 585 chrUn_NT_468549v1 395 842 (CAAGG)n 575 + 395 842 0 3 46,219,157, 0,46,290, +,+,+, 667888 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 858 1465 (CCTTG)n 519 + 858 1465 0 3 180,201,183, 0,190,424, +,+,+, 667889 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 2130 2569 (CAAGG)n 509 + 2130 2569 0 2 222,217, 0,222, +,+, 667893 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 3237 3690 (CAAGG)n 516 + 3237 3690 0 2 115,144, 0,309, +,+, 667896 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 3870 4467 (CCTTG)n 540 + 3870 4467 0 2 224,351, 0,246, +,+, 667898 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 5078 5497 (CAAGG)n 527 + 5078 5497 0 2 200,189, 0,230, +,+, 667902 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 5567 6148 (CCTTG)n 524 + 5567 6148 0 3 157,49,186, 0,325,395, +,+,+, 667903 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 6817 7273 (CAAGG)n 509 + 6817 7273 0 2 218,238, 0,218, +,+, 667909 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 8577 9413 (CCTTG)n 454 + 8577 9413 0 4 186,189,255,161, 0,214,403,675, +,+,+,+, 667917 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 9411 9761 (CAGGC)n 329 + 9411 9761 0 2 250,40, 0,310, +,+, 667918 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 9761 10225 (CAAGG)n 587 + 9761 10225 0 3 46,222,171, 0,46,293, +,+,+, 667919 Simple_repeat Simple_repeat 585 chrUn_NT_468549v1 10291 10699 (CCTTG)n 548 + 10291 10699 0 2 174,222, 0,186, +,+, 667920 Simple_repeat Simple_repeat 585 chrUn_NT_468550v1 1857 10886 GGXHOI 404 - 1857 10886 0 12 291,612,431,1095,1137,65,1032,1026,520,1146,987,474, 0,332,957,1408,2520,3669,3749,4821,5859,6394,7555,8555, -,-,-,-,-,-,-,-,-,-,-,-, 667924 Satellite W-chromosome 585 chrUn_NT_468552v1 655 1289 (CAATG)n 355 + 655 1289 0 3 174,183,195, 0,199,439, +,+,+, 667928 Simple_repeat Simple_repeat 585 chrUn_NT_468552v1 1285 1967 (CAGTG)n 424 + 1285 1967 0 2 220,108, 0,574, +,+, 667929 Simple_repeat Simple_repeat 585 chrUn_NT_468552v1 1914 2297 (CAATG)n 344 + 1914 2297 0 2 175,193, 0,190, +,+, 667931 Simple_repeat Simple_repeat 585 chrUn_NT_468552v1 10226 11198 (CTCTATGGGG)n 590 + 10226 11198 0 4 121,293,382,89, 0,163,487,883, +,+,+,+, 667948 Satellite Satellite 585 chrUn_NT_468554v1 5093 5512 (ACCCATTGGG)n 246 - 5093 5512 0 2 137,271, 0,148, -,-, 667960 Satellite Satellite 585 chrUn_NT_468554v1 6215 6544 (ACCCATTGGG)n 301 - 6215 6544 0 2 156,173, 0,156, -,-, 667963 Satellite Satellite 585 chrUn_NT_468554v1 7231 7781 (ACCCATTGGG)n 346 - 7231 7781 0 4 123,153,124,136, 0,123,276,414, -,-,-,-, 667966 Satellite Satellite 585 chrUn_NT_468557v1 908 4062 GGXHOI 399 - 908 4062 0 4 720,944,420,966, 0,734,1709,2188, -,-,-,-, 667991 Satellite W-chromosome 585 chrUn_NT_468557v1 5181 11174 GGXHOI 416 - 5181 11174 0 8 936,143,56,852,234,1488,1093,1030, 0,951,1115,1203,2069,2327,3847,4963, -,-,-,-,-,-,-,-, 667993 Satellite W-chromosome 585 chrUn_NT_468559v1 795 992 A-rich 359 + 795 992 0 2 37,99, 0,98, +,+, 667999 Low_complexity Low_complexity 585 chrUn_NT_468560v1 1649 6341 GGXHOI 391 - 1649 6341 0 2 629,4047, 0,645, -,-, 668034 Satellite W-chromosome 585 chrUn_NT_468560v1 6364 10985 ENS1-LTR 935 - 6364 10985 0 3 917,2830,874, 0,917,3747, -,-,-, 668035 LTR ERVL 585 chrUn_NT_468563v1 6277 9368 GGLTR7-int 415 + 6277 9368 0 4 116,1610,946,277, 0,116,1821,2814, +,+,+,+, 668069 LTR ERV1 585 chrUn_NT_468568v1 10435 10566 GA-rich 340 + 10435 10566 0 2 42,33, 0,98, +,+, 668156 Low_complexity Low_complexity 585 chrUn_NT_468569v1 3349 5713 CR1-F 831 - 3349 5713 0 2 203,2098, 0,266, -,-, 668161 LINE CR1 585 chrUn_NT_468570v1 1277 2267 GGXHOI 403 - 1277 2267 0 2 394,545, 0,445, -,-, 668165 Satellite W-chromosome 585 chrUn_NT_468570v1 2392 6877 GGXHOI 418 - 2392 6877 0 3 2432,1755,262, 0,2448,4223, -,-,-, 668166 Satellite W-chromosome 585 chrUn_NT_468570v1 6971 7755 GGXHOI 386 - 6971 7755 0 2 145,587, 0,197, -,-, 668167 Satellite W-chromosome 585 chrUn_NT_468570v1 7830 10855 GGXHOI 414 - 7830 10855 0 5 1452,384,141,252,712, 0,1469,1874,2031,2313, -,-,-,-,-, 668168 Satellite W-chromosome 585 chrUn_NT_468572v1 4751 6246 GGXHOI 376 - 4751 6246 0 2 960,472, 0,1023, -,-, 668189 Satellite W-chromosome 585 chrUn_NT_468572v1 6320 7282 GGXHOI 377 - 6320 7282 0 2 476,471, 0,491, -,-, 668190 Satellite W-chromosome 585 chrUn_NT_468572v1 8527 10143 GGXHOI 380 - 8527 10143 0 2 512,1042, 0,574, -,-, 668193 Satellite W-chromosome 585 chrUn_NT_468573v1 7176 11133 GGXHOI 369 - 7176 11133 0 3 1690,1747,476, 0,1710,3481, -,-,-, 668197 Satellite W-chromosome 585 chrUn_NT_468574v1 3028 3599 (ACCCCATAGGG)n 636 + 3028 3599 0 2 268,261, 0,310, +,+, 668203 Satellite Satellite 585 chrUn_NT_468575v1 6127 6886 CR1-F 248 + 6127 6886 0 2 210,549, 0,210, +,+, 668215 LINE CR1 585 chrUn_NT_468577v1 6130 6818 CR1-H 765 + 6130 6818 0 2 542,115, 0,573, +,+, 668233 LINE CR1 585 chrUn_NT_468579v1 2756 7670 GGXHOI 592 - 2756 7670 0 7 407,299,148,296,271,247,455, 0,1082,1392,2213,2520,3335,4459, -,-,-,-,-,-,-, 668255 Satellite W-chromosome 585 chrUn_NT_468579v1 8390 11142 GGXHOI 546 - 8390 11142 0 4 405,518,425,410, 0,1078,1906,2342, -,-,-,-, 668261 Satellite W-chromosome 585 chrUn_NT_468580v1 8854 9394 GA-rich 134 + 8854 9394 0 2 50,457, 0,83, +,+, 668275 Low_complexity Low_complexity 585 chrUn_NT_468581v1 2185 3816 GGXHOI 331 - 2185 3816 0 3 242,872,479, 0,257,1152, -,-,-, 668280 Satellite W-chromosome 585 chrUn_NT_468581v1 3883 7619 GGXHOI 362 - 3883 7619 0 7 389,294,912,312,225,1274,185, 0,411,717,1679,2013,2260,3551, -,-,-,-,-,-,-, 668281 Satellite W-chromosome 585 chrUn_NT_468581v1 7683 11160 GGXHOI 368 - 7683 11160 0 4 266,1382,1658,127, 0,283,1677,3350, -,-,-,-, 668282 Satellite W-chromosome 585 chrUn_NT_468582v1 4064 6612 GGXHOI 375 - 4064 6612 0 2 1120,1386, 0,1162, -,-, 668285 Satellite W-chromosome 585 chrUn_NT_468583v1 6016 6131 (TTTTC)n 342 + 6016 6131 0 2 85,9, 0,106, +,+, 668293 Simple_repeat Simple_repeat 585 chrUn_NT_468585v1 2388 3322 GGXHOI 369 - 2388 3322 0 2 502,414, 0,520, -,-, 668309 Satellite W-chromosome 585 chrUn_NT_468585v1 4148 6325 GGXHOI 385 - 4148 6325 0 3 401,1257,445, 0,421,1732, -,-,-, 668311 Satellite W-chromosome 585 chrUn_NT_468585v1 6600 7140 GGXHOI 406 - 6600 7140 0 2 359,161, 0,379, -,-, 668312 Satellite W-chromosome 585 chrUn_NT_468585v1 8967 9898 GGXHOI 351 - 8967 9898 0 3 421,159,268, 0,463,663, -,-,-, 668315 Satellite W-chromosome 585 chrUn_NT_468586v1 358 3003 GGLTR3F1 924 + 358 3003 0 2 2178,467, 0,2178, +,+, 668319 LTR ERVL 585 chrUn_NT_468586v1 3012 3725 GGXHOI 404 - 3012 3725 0 2 339,358, 0,355, -,-, 668320 Satellite W-chromosome 585 chrUn_NT_468586v1 4919 6017 GGXHOI 373 - 4919 6017 0 3 724,202,139, 0,736,959, -,-,-, 668322 Satellite W-chromosome 585 chrUn_NT_468586v1 6149 11145 GGXHOI 400 - 6149 11145 0 5 744,503,1187,1881,563, 0,760,1310,2510,4433, -,-,-,-,-, 668323 Satellite W-chromosome 585 chrUn_NT_468588v1 980 2601 GGXHOI 596 - 980 2601 0 2 650,300, 0,1321, -,-, 668334 Satellite W-chromosome 585 chrUn_NT_468588v1 3745 6446 GGXHOI 573 - 3745 6446 0 4 845,100,613,502, 0,1410,1544,2199, -,-,-,-, 668338 Satellite W-chromosome 585 chrUn_NT_468588v1 6490 8773 GGXHOI 561 - 6490 8773 0 3 943,295,361, 0,1616,1922, -,-,-, 668341 Satellite W-chromosome 585 chrUn_NT_468588v1 8855 11134 GGXHOI 602 - 8855 11134 0 3 126,437,481, 0,689,1798, -,-,-, 668343 Satellite W-chromosome 585 chrUn_NT_468591v1 9101 11041 GGXHOI 389 - 9101 11041 0 2 428,1497, 0,443, -,-, 668369 Satellite W-chromosome 585 chrUn_NT_468592v1 4756 7793 CR1-F 742 + 4756 7793 0 2 791,2194, 0,843, +,+, 668373 LINE CR1 585 chrUn_NT_468592v1 9405 9515 (AGCAA)n 352 + 9405 9515 0 2 21,56, 0,54, +,+, 668378 Simple_repeat Simple_repeat 585 chrUn_NT_468593v1 2226 11142 GGXHOI 423 - 2226 11142 0 4 3837,482,4300,162, 0,3883,4410,8754, -,-,-,-, 668382 Satellite W-chromosome 585 chrUn_NT_468594v1 863 7461 GGXHOI 529 - 863 7461 0 12 196,59,324,59,490,58,325,224,731,462,101,272, 0,477,874,1642,2040,2811,3208,3809,4462,5530,6210,6326, -,-,-,-,-,-,-,-,-,-,-,-, 668385 Satellite W-chromosome 585 chrUn_NT_468594v1 7547 11143 GGXHOI 522 - 7547 11143 0 4 534,868,847,398, 0,831,2018,3198, -,-,-,-, 668396 Satellite W-chromosome 585 chrUn_NT_468595v1 9396 10515 CR1-B2 695 + 9396 10515 0 2 225,891, 0,228, +,+, 668404 LINE CR1 585 chrUn_NT_468597v1 4443 4643 CR1-X 438 - 4443 4643 0 2 154,46, 0,154, -,-, 668415 LINE CR1 585 chrUn_NT_468598v1 4087 6755 GGXHOI 369 + 4087 6755 0 3 631,918,1004, 0,689,1664, +,+,+, 668428 Satellite W-chromosome 585 chrUn_NT_468599v1 1715 2076 Sat-CR1_GG 160 + 1715 2076 0 2 27,124, 0,237, +,+, 668438 Satellite Satellite 585 chrUn_NT_468599v1 2973 3503 Sat-CR1_GG 166 + 2973 3503 0 2 164,124, 0,406, +,+, 668443 Satellite Satellite 585 chrUn_NT_468599v1 5820 6348 Sat-CR1_GG 162 + 5820 6348 0 2 163,123, 0,405, +,+, 668452 Satellite Satellite 585 chrUn_NT_468599v1 8675 9255 Sat-CR1_GG 190 + 8675 9255 0 2 238,176, 0,404, +,+, 668462 Satellite Satellite 585 chrUn_NT_468600v1 8203 8353 GGERVL-C-int 453 - 8203 8353 0 2 84,66, 0,84, -,-, 668476 LTR ERVL 585 chrUn_NT_468600v1 9599 9911 CR1-X 501 - 9599 9911 0 3 50,78,174, 0,60,138, -,-,-, 668478 LINE CR1 585 chrUn_NT_468601v1 1514 3746 GGXHOI 429 - 1514 3746 0 5 509,679,345,391,163, 0,529,1224,1627,2069, -,-,-,-,-, 668480 Satellite W-chromosome 585 chrUn_NT_468601v1 3812 5601 GGXHOI 388 - 3812 5601 0 5 100,615,155,594,250, 0,117,749,918,1539, -,-,-,-,-, 668481 Satellite W-chromosome 585 chrUn_NT_468601v1 5898 11130 GGXHOI 401 - 5898 11130 0 4 1739,2713,542,117, 0,1776,4522,5115, -,-,-,-, 668482 Satellite W-chromosome 585 chrUn_NT_468603v1 1232 1360 (AACGGAAAG)n 868 + 1232 1360 0 2 38,39, 0,89, +,+, 668485 Simple_repeat Simple_repeat 585 chrUn_NT_468604v1 416 1641 (CAAGG)n 603 + 416 1641 0 4 202,119,251,159, 0,517,636,1066, +,+,+,+, 668494 Simple_repeat Simple_repeat 585 chrUn_NT_468604v1 4308 11126 GGXHOI 415 + 4308 11126 0 10 413,1142,1146,1123,438,690,704,331,147,520, 0,433,1595,2761,3904,4356,5066,5782,6128,6298, +,+,+,+,+,+,+,+,+,+, 668509 Satellite W-chromosome 585 chrUn_NT_468606v1 1589 1968 (CCCTAA)n 767 + 1589 1968 0 2 178,175, 0,204, +,+, 668557 Simple_repeat Simple_repeat 585 chrUn_NT_468606v1 3026 3122 CR1-C4 624 - 3026 3122 0 2 53,43, 0,53, -,-, 668560 LINE CR1 585 chrUn_NT_468606v1 6742 6946 CR1-H 529 + 6742 6946 0 3 60,60,58, 0,68,146, +,+,+, 668569 LINE CR1 585 chrUn_NT_468608v1 2214 4626 GGLTR7-int 565 - 2214 4626 0 2 752,336, 0,2076, -,-, 668598 LTR ERV1 585 chrUn_NT_468608v1 8544 8904 G-rich 457 + 8544 8904 0 2 38,275, 0,85, +,+, 668605 Low_complexity Low_complexity 585 chrUn_NT_468610v1 2091 3810 GGERVL-B-int 648 + 2091 3810 0 4 117,271,522,226, 0,179,971,1493, +,+,+,+, 668620 LTR ERVL 585 chrUn_NT_468612v1 2407 4552 GGXHOI 342 + 2407 4552 0 2 712,1416, 0,729, +,+, 668637 Satellite W-chromosome 585 chrUn_NT_468612v1 5218 7904 GGXHOI 372 + 5218 7904 0 2 557,2112, 0,574, +,+, 668639 Satellite W-chromosome 585 chrUn_NT_468614v1 328 1502 (CCTTG)n 591 + 328 1502 0 4 185,156,92,210, 0,218,847,964, +,+,+,+, 668647 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 1531 3563 (CCTTG)n 558 + 1531 3563 0 5 271,17,115,247,238, 0,457,633,1117,1794, +,+,+,+,+, 668652 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 3733 4252 (CCTTG)n 556 + 3733 4252 0 2 176,332, 0,187, +,+, 668661 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 4500 5306 (CCTTG)n 533 + 4500 5306 0 3 270,246,277, 0,270,529, +,+,+, 668665 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 5327 5790 (GCCTG)n 438 + 5327 5790 0 2 197,236, 0,227, +,+, 668666 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 6205 7179 (CCTTG)n 533 + 6205 7179 0 4 159,49,277,117, 0,332,381,857, +,+,+,+, 668669 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 8135 9011 (CCTTG)n 613 + 8135 9011 0 4 236,228,214,181, 0,240,468,695, +,+,+,+, 668677 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 9086 9656 (CCTTG)n 650 + 9086 9656 0 2 178,208, 0,362, +,+, 668680 Simple_repeat Simple_repeat 585 chrUn_NT_468614v1 9776 11091 (CCTTG)n 592 + 9776 11091 0 5 179,211,101,185,428, 0,179,584,702,887, +,+,+,+,+, 668683 Simple_repeat Simple_repeat 585 chrUn_NT_468615v1 289 1606 CR1-H 590 - 289 1606 0 2 116,1201, 0,116, -,-, 668687 LINE CR1 585 chrUn_NT_468616v1 1288 3228 GGXHOI 405 - 1288 3228 0 4 939,558,148,249, 0,952,1529,1691, -,-,-,-, 668697 Satellite W-chromosome 585 chrUn_NT_468616v1 3822 4277 GGXHOI 413 - 3822 4277 0 2 148,292, 0,163, -,-, 668699 Satellite W-chromosome 585 chrUn_NT_468616v1 4362 5359 GGXHOI 407 - 4362 5359 0 2 564,413, 0,584, -,-, 668700 Satellite W-chromosome 585 chrUn_NT_468616v1 5444 6437 GGXHOI 411 - 5444 6437 0 3 487,146,336, 0,500,657, -,-,-, 668701 Satellite W-chromosome 585 chrUn_NT_468616v1 6522 8487 GGXHOI 384 - 6522 8487 0 3 495,1120,322, 0,510,1643, -,-,-, 668702 Satellite W-chromosome 585 chrUn_NT_468616v1 9162 10225 GGXHOI 337 - 9162 10225 0 2 721,329, 0,734, -,-, 668704 Satellite W-chromosome 585 chrUn_NT_468617v1 4054 6896 GGXHOI 397 - 4054 6896 0 2 361,2457, 0,385, -,-, 668707 Satellite W-chromosome 585 chrUn_NT_468617v1 8665 11106 GGXHOI 378 - 8665 11106 0 3 556,1620,227, 0,572,2214, -,-,-, 668709 Satellite W-chromosome 585 chrUn_NT_468618v1 2808 3851 GGXHOI 342 - 2808 3851 0 2 633,367, 0,676, -,-, 668712 Satellite W-chromosome 585 chrUn_NT_468618v1 4136 4731 GGXHOI 366 - 4136 4731 0 2 309,269, 0,326, -,-, 668713 Satellite W-chromosome 585 chrUn_NT_468618v1 5760 6304 GGXHOI 355 - 5760 6304 0 2 262,265, 0,279, -,-, 668715 Satellite W-chromosome 585 chrUn_NT_468622v1 10582 10711 GA-rich 324 + 10582 10711 0 2 42,38, 0,91, +,+, 668814 Low_complexity Low_complexity 585 chrUn_NT_468623v1 1875 8010 GGXHOI 451 + 1875 8010 0 4 1296,2141,1145,1500, 0,1312,3474,4635, +,+,+,+, 668817 Satellite W-chromosome 585 chrUn_NT_468623v1 8532 9601 GGXHOI 321 + 8532 9601 0 2 764,258, 0,811, +,+, 668819 Satellite W-chromosome 585 chrUn_NT_468623v1 9726 11108 GGXHOI 397 + 9726 11108 0 5 287,148,306,306,225, 0,338,505,830,1157, +,+,+,+,+, 668820 Satellite W-chromosome 585 chrUn_NT_468624v1 8462 8823 GGLTR11 478 + 8462 8823 0 2 90,230, 0,131, +,+, 668825 LTR ERV1 585 chrUn_NT_468625v1 5498 8310 Char12Mar1_GG 431 - 5498 8310 0 2 903,251, 0,2561, -,-, 668834 DNA hAT-Charlie 585 chrUn_NT_468626v1 1450 4479 GGLTR7-int 381 + 1450 4479 0 4 114,1522,906,223, 0,115,1745,2806, +,+,+,+, 668841 LTR ERV1 585 chrUn_NT_468627v1 1083 1517 CR1-H 310 - 1083 1517 0 2 184,210, 0,224, -,-, 668847 LINE CR1 585 chrUn_NT_468627v1 5597 6851 Char12Mar1_GG 592 - 5597 6851 0 2 121,581, 0,673, -,-, 668852 DNA hAT-Charlie 585 chrUn_NT_468627v1 9303 9916 CR1-H 336 - 9303 9916 0 2 379,182, 0,431, -,-, 668855 LINE CR1 585 chrUn_NT_468628v1 700 2393 CR1-B2 592 + 700 2393 0 2 866,299, 0,1394, +,+, 668858 LINE CR1 585 chrUn_NT_468629v1 3657 6036 GGXHOI 540 + 3657 6036 0 5 381,83,303,188,19, 0,572,1201,1860,2360, +,+,+,+,+, 668875 Satellite W-chromosome 585 chrUn_NT_468629v1 7532 8111 GGXHOI 474 + 7532 8111 0 2 119,222, 0,357, +,+, 668881 Satellite W-chromosome 585 chrUn_NT_468629v1 8260 9770 GGXHOI 524 + 8260 9770 0 2 721,600, 0,910, +,+, 668883 Satellite W-chromosome 585 chrUn_NT_468629v1 9846 11034 GGXHOI 560 + 9846 11034 0 3 260,190,446, 0,505,742, +,+,+, 668885 Satellite W-chromosome 585 chrUn_NT_468630v1 1942 2858 GGXHOI 305 + 1942 2858 0 3 220,269,349, 0,280,567, +,+,+, 668889 Satellite W-chromosome 585 chrUn_NT_468630v1 2938 4710 GGXHOI 324 + 2938 4710 0 3 276,668,728, 0,339,1044, +,+,+, 668890 Satellite W-chromosome 585 chrUn_NT_468630v1 6000 7488 GGXHOI 316 + 6000 7488 0 3 152,109,779, 0,214,709, +,+,+, 668892 Satellite W-chromosome 585 chrUn_NT_468631v1 802 1864 GGXHOI 569 + 802 1864 0 3 568,165,26, 0,605,1036, +,+,+, 668900 Satellite W-chromosome 585 chrUn_NT_468631v1 2315 4051 GGXHOI 574 + 2315 4051 0 4 104,372,366,19, 0,416,1037,1717, +,+,+,+, 668903 Satellite W-chromosome 585 chrUn_NT_468631v1 4129 5353 GGXHOI 608 + 4129 5353 0 2 891,19, 0,1205, +,+, 668907 Satellite W-chromosome 585 chrUn_NT_468631v1 5431 7959 GGXHOI 566 + 5431 7959 0 4 735,370,367,17, 0,1202,1821,2511, +,+,+,+, 668909 Satellite W-chromosome 585 chrUn_NT_468631v1 8027 10283 GGXHOI 516 + 8027 10283 0 4 185,192,687,114, 0,591,1098,2142, +,+,+,+, 668913 Satellite W-chromosome 585 chrUn_NT_468633v1 1791 2673 GGXHOI 322 - 1791 2673 0 2 622,244, 0,638, -,-, 668927 Satellite W-chromosome 585 chrUn_NT_468633v1 2881 5113 GGXHOI 375 - 2881 5113 0 2 390,1784, 0,448, -,-, 668928 Satellite W-chromosome 585 chrUn_NT_468633v1 6569 7666 GGXHOI 356 - 6569 7666 0 2 391,645, 0,452, -,-, 668930 Satellite W-chromosome 585 chrUn_NT_468633v1 8447 11081 GGXHOI 376 - 8447 11081 0 2 1990,586, 0,2048, -,-, 668932 Satellite W-chromosome 585 chrUn_NT_468634v1 2817 4104 GGXHOI 498 - 2817 4104 0 2 492,765, 0,522, -,-, 668935 Satellite W-chromosome 585 chrUn_NT_468634v1 8823 10229 GGXHOI 536 - 8823 10229 0 2 975,210, 0,1196, -,-, 668940 Satellite W-chromosome 585 chrUn_NT_468635v1 675 1244 (CCTTG)n 546 + 675 1244 0 2 259,293, 0,276, +,+, 668945 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 1257 1585 (CCTTG)n 470 + 1257 1585 0 2 111,31, 0,297, +,+, 668947 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 1900 2350 (CAAGG)n 533 + 1900 2350 0 2 222,228, 0,222, +,+, 668950 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 2406 3044 (CCTTG)n 537 + 2406 3044 0 3 85,33,333, 0,268,305, +,+,+, 668951 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 3035 3354 (GCCTG)n 400 + 3035 3354 0 2 98,43, 0,276, +,+, 668954 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 3732 4001 (CAAGG)n 654 + 3732 4001 0 2 46,223, 0,46, +,+, 668958 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 3928 4269 (CAGGC)n 352 + 3928 4269 0 2 90,73, 0,268, +,+, 668959 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 4525 5171 (CAAGG)n 496 + 4525 5171 0 3 229,135,156, 0,336,490, +,+,+, 668962 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 5224 5455 (CAAGG)n 464 + 5224 5455 0 2 24,183, 0,48, +,+, 668965 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 5572 6221 (CCTTG)n 521 + 5572 6221 0 2 259,373, 0,276, +,+, 668967 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 7026 8125 (CAAGG)n 497 + 7026 8125 0 4 372,214,185,25, 0,372,614,1074, +,+,+,+, 668972 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 8200 8677 (CCTTG)n 499 + 8200 8677 0 2 179,262, 0,215, +,+, 668976 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 8720 9210 (CCTTG)n 538 + 8720 9210 0 2 239,223, 0,267, +,+, 668978 Simple_repeat Simple_repeat 585 chrUn_NT_468635v1 9236 10473 GGXHOI 341 - 9236 10473 0 2 904,308, 0,929, -,-, 668979 Satellite W-chromosome 585 chrUn_NT_468636v1 713 5972 GGXHOI 567 - 713 5972 0 5 150,357,372,501,2499, 0,165,1014,1815,2760, -,-,-,-,-, 668983 Satellite W-chromosome 585 chrUn_NT_468636v1 3536 11091 Sat-CR1_GG 170 - 3536 11091 0 2 2479,624, 0,6931, -,-, 668987 Satellite Satellite 585 chrUn_NT_468636v1 6015 10467 GGXHOI 564 - 6015 10467 0 2 1608,2526, 0,1926, -,-, 668988 Satellite W-chromosome 585 chrUn_NT_468637v1 5983 6587 (CTCTATGGGG)n 454 + 5983 6587 0 2 248,334, 0,270, +,+, 668994 Satellite Satellite 585 chrUn_NT_468637v1 6900 7148 (ACCCCATAGGG)n 370 . 6900 7148 0 2 121,113, 0,135, -,+, 668997 Satellite Satellite 585 chrUn_NT_468637v1 7719 8049 (ACCCCATAGGG)n 390 - 7719 8049 0 2 134,72, 0,258, -,-, 669001 Satellite Satellite 585 chrUn_NT_468637v1 7853 8175 (CTCTATGGGG)n 375 + 7853 8175 0 2 124,166, 0,156, +,+, 669002 Satellite Satellite 585 chrUn_NT_468637v1 8193 9020 (ACCCCATAGGG)n 385 + 8193 9020 0 5 16,164,200,45,313, 0,60,224,469,514, +,+,+,+,+, 669003 Satellite Satellite 585 chrUn_NT_468637v1 9958 10299 (ACCCCATAGGG)n 428 - 9958 10299 0 2 166,125, 0,216, -,-, 669009 Satellite Satellite 585 chrUn_NT_468638v1 1712 2965 GGXHOI 411 - 1712 2965 0 2 854,357, 0,896, -,-, 669015 Satellite W-chromosome 585 chrUn_NT_468638v1 3713 5902 GGXHOI 399 - 3713 5902 0 2 1831,342, 0,1847, -,-, 669016 Satellite W-chromosome 585 chrUn_NT_468638v1 6662 9070 GGXHOI 406 - 6662 9070 0 5 230,609,261,159,1020, 0,269,894,1211,1388, -,-,-,-,-, 669018 Satellite W-chromosome 585 chrUn_NT_468638v1 10106 10823 GGXHOI 389 - 10106 10823 0 2 388,272, 0,445, -,-, 669019 Satellite W-chromosome 585 chrUn_NT_468641v1 6410 8477 GGXHOI 423 + 6410 8477 0 3 1253,613,163, 0,1267,1904, +,+,+, 669028 Satellite W-chromosome 585 chrUn_NT_468642v1 1736 4388 GGERVL-B-int 705 - 1736 4388 0 4 903,1015,45,308, 0,903,1949,2344, -,-,-,-, 669033 LTR ERVL 585 chrUn_NT_468642v1 6722 9956 GGLTR7A 828 - 6722 9956 0 2 577,2648, 0,586, -,-, 669037 LTR ERV1 585 chrUn_NT_468642v1 9954 10633 GGLTR7A 796 + 9954 10633 0 2 88,583, 0,96, +,+, 669038 LTR ERV1 585 chrUn_NT_468643v1 7438 11031 GGXHOI 367 - 7438 11031 0 2 552,3023, 0,570, -,-, 669041 Satellite W-chromosome 585 chrUn_NT_468647v1 8022 8643 CR1-H 669 - 8022 8643 0 2 138,477, 0,144, -,-, 669123 LINE CR1 585 chrUn_NT_468648v1 6726 8351 GGXHOI 378 - 6726 8351 0 4 210,270,513,497, 0,246,558,1128, -,-,-,-, 669128 Satellite W-chromosome 585 chrUn_NT_468649v1 131 621 (CGAGG)n 526 + 131 621 0 2 196,125, 0,365, +,+, 669131 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 1217 1606 (CGAGG)n 589 + 1217 1606 0 2 182,182, 0,207, +,+, 669135 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 3147 3843 (CGAGG)n 516 + 3147 3843 0 2 305,391, 0,305, +,+, 669145 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 3997 4380 (CGAGG)n 589 + 3997 4380 0 2 180,174, 0,209, +,+, 669147 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 6590 6967 (CGAGG)n 484 + 6590 6967 0 2 181,196, 0,181, +,+, 669156 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 7169 8089 (CGAGG)n 489 + 7169 8089 0 4 183,177,277,8, 0,218,446,912, +,+,+,+, 669158 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 8159 9218 (CGAGG)n 561 + 8159 9218 0 2 176,864, 0,195, +,+, 669160 Simple_repeat Simple_repeat 585 chrUn_NT_468649v1 9608 10023 (CGAGG)n 523 + 9608 10023 0 2 184,179, 0,236, +,+, 669162 Simple_repeat Simple_repeat 585 chrUn_NT_468650v1 5068 5523 CR1-H 679 + 5068 5523 0 2 295,160, 0,295, +,+, 669169 LINE CR1 585 chrUn_NT_468650v1 8786 9410 CR1-H 648 + 8786 9410 0 2 477,142, 0,482, +,+, 669172 LINE CR1 585 chrUn_NT_468651v1 7767 9058 GGLTR7-int 276 - 7767 9058 0 2 279,259, 0,1032, -,-, 669182 LTR ERV1 585 chrUn_NT_468652v1 4385 4463 (C)n 847 + 4385 4463 0 2 22,19, 0,59, +,+, 669194 Simple_repeat Simple_repeat 585 chrUn_NT_468653v1 1863 4077 GGXHOI 598 - 1863 4077 0 3 247,148,1251, 0,258,963, -,-,-, 669212 Satellite W-chromosome 585 chrUn_NT_468653v1 4119 5795 GGXHOI 595 - 4119 5795 0 3 407,125,544, 0,965,1132, -,-,-, 669215 Satellite W-chromosome 585 chrUn_NT_468653v1 5837 11067 GGXHOI 589 - 5837 11067 0 7 793,148,457,299,148,458,211, 0,804,1626,2756,3066,3888,5019, -,-,-,-,-,-,-, 669218 Satellite W-chromosome 585 chrUn_NT_468654v1 972 1540 CR1-F 509 + 972 1540 0 2 199,199, 0,369, +,+, 669225 LINE CR1 585 chrUn_NT_468654v1 1583 3570 CR1-F 500 + 1583 3570 0 6 203,202,204,155,201,151, 0,245,489,959,1405,1836, +,+,+,+,+,+, 669227 LINE CR1 585 chrUn_NT_468654v1 3613 10695 CR1-F 531 + 3613 10695 0 21 203,204,203,155,201,189,200,203,203,204,155,200,190,199,203,203,204,155,200,190,211, 0,245,491,960,1405,1651,1882,2380,2625,2870,3340,3785,4030,4262,4760,5005,5250,5720,6164,6638,6871, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 669231 LINE CR1 585 chrUn_NT_468654v1 10738 11060 CR1-F 608 + 10738 11060 0 2 202,78, 0,244, +,+, 669241 LINE CR1 585 chrUn_NT_468655v1 696 10957 GGXHOI 418 + 696 10957 0 9 767,1487,894,1143,1293,3252,160,741,316, 0,784,2282,3198,4360,5670,8967,9149,9945, +,+,+,+,+,+,+,+,+, 669243 Satellite W-chromosome 585 chrUn_NT_468656v1 2845 3870 (GCCCCACAGCT)n 496 - 2845 3870 0 3 390,384,214, 0,402,811, -,-,-, 669246 Satellite Satellite 585 chrUn_NT_468657v1 3890 10089 GGXHOI 483 - 3890 10089 0 8 382,941,761,1186,686,228,394,1486, 0,403,1360,2137,3339,4047,4297,4713, -,-,-,-,-,-,-,-, 669251 Satellite W-chromosome 585 chrUn_NT_468658v1 3472 4613 CR1-D 733 - 3472 4613 0 2 793,328, 0,813, -,-, 669254 LINE CR1 585 chrUn_NT_468659v1 1694 5119 GGXHOI 393 - 1694 5119 0 4 1506,1303,153,367, 0,1524,2886,3058, -,-,-,-, 669260 Satellite W-chromosome 585 chrUn_NT_468659v1 5416 10770 GGXHOI 409 - 5416 10770 0 8 187,165,2219,750,563,412,535,310, 0,202,410,2665,3472,4054,4482,5044, -,-,-,-,-,-,-,-, 669261 Satellite W-chromosome 585 chrUn_NT_468660v1 1020 2406 GGLTR7-int 240 - 1020 2406 0 3 273,309,97, 0,979,1289, -,-,-, 669264 LTR ERV1 585 chrUn_NT_468660v1 3146 5644 GGERVL-B-int 758 - 3146 5644 0 3 919,1264,315, 0,919,2183, -,-,-, 669266 LTR ERVL 585 chrUn_NT_468660v1 8004 9083 GGLTR7A 819 - 8004 9083 0 2 614,465, 0,614, -,-, 669270 LTR ERV1 585 chrUn_NT_468660v1 9613 10041 GGLTR7A 854 - 9613 10041 0 2 254,174, 0,254, -,-, 669272 LTR ERV1 585 chrUn_NT_468660v1 10616 10875 (CAAGG)n 456 + 10616 10875 0 2 49,210, 0,49, +,+, 669277 Simple_repeat Simple_repeat 585 chrUn_NT_468661v1 6838 6934 (TCCCACC)n 318 + 6838 6934 0 2 42,16, 0,80, +,+, 669287 Simple_repeat Simple_repeat 585 chrUn_NT_468661v1 9631 10107 (CAAGG)n 580 + 9631 10107 0 2 248,49, 0,427, +,+, 669292 Simple_repeat Simple_repeat 585 chrUn_NT_468662v1 1159 2091 (CAAGG)n 480 + 1159 2091 0 2 182,731, 0,201, +,+, 669303 Simple_repeat Simple_repeat 585 chrUn_NT_468662v1 2089 2594 (CCTTG)n 507 + 2089 2594 0 2 265,194, 0,311, +,+, 669304 Simple_repeat Simple_repeat 585 chrUn_NT_468662v1 2665 2992 (CCTTG)n 466 + 2665 2992 0 2 123,19, 0,308, +,+, 669305 Simple_repeat Simple_repeat 585 chrUn_NT_468662v1 3349 4636 (CAAGG)n 507 + 3349 4636 0 5 352,204,380,142,25, 0,352,556,936,1262, +,+,+,+,+, 669309 Simple_repeat Simple_repeat 585 chrUn_NT_468662v1 4655 4908 (CCTTG)n 465 + 4655 4908 0 2 49,182, 0,71, +,+, 669311 Simple_repeat Simple_repeat 585 chrUn_NT_468662v1 6033 8387 GGXHOI 369 - 6033 8387 0 3 715,682,883, 0,731,1471, -,-,-, 669317 Satellite W-chromosome 585 chrUn_NT_468662v1 9755 10933 GGXHOI 340 - 9755 10933 0 2 727,393, 0,785, -,-, 669319 Satellite W-chromosome 585 chrUn_NT_468663v1 2989 11058 GGXHOI 567 - 2989 11058 0 5 2073,21,400,148,15, 0,2293,2346,6104,8054, -,-,-,-,-, 669324 Satellite W-chromosome 585 chrUn_NT_468664v1 2627 2935 CR1-X 455 - 2627 2935 0 3 57,77,171, 0,60,137, -,-,-, 669331 LINE CR1 585 chrUn_NT_468665v1 10343 11055 GGXHOI 353 - 10343 11055 0 3 220,268,147, 0,280,565, -,-,-, 669344 Satellite W-chromosome 585 chrUn_NT_468666v1 7696 8242 (ACCCCATAGGG)n 564 + 7696 8242 0 3 188,23,75, 0,319,471, +,+,+, 669348 Satellite Satellite 585 chrUn_NT_468666v1 8363 8599 (CTCTATGGGG)n 596 - 8363 8599 0 2 76,33, 0,203, -,-, 669353 Satellite Satellite 585 chrUn_NT_468666v1 8439 9057 (ACCCCATAGGG)n 603 + 8439 9057 0 3 127,244,120, 0,127,498, +,+,+, 669354 Satellite Satellite 585 chrUn_NT_468666v1 9328 9794 (ACCCATAGAG)n 733 + 9328 9794 0 2 312,136, 0,330, +,+, 669359 Satellite Satellite 585 chrUn_NT_468667v1 1691 2675 GGXHOI 331 - 1691 2675 0 2 474,471, 0,513, -,-, 669365 Satellite W-chromosome 585 chrUn_NT_468669v1 2136 5128 GGXHOI 372 - 2136 5128 0 2 1286,1665, 0,1327, -,-, 669412 Satellite W-chromosome 585 chrUn_NT_468669v1 5264 8102 GGXHOI 373 - 5264 8102 0 3 1339,639,798, 0,1386,2040, -,-,-, 669413 Satellite W-chromosome 585 chrUn_NT_468669v1 8283 9603 GGXHOI 377 - 8283 9603 0 2 392,870, 0,450, -,-, 669414 Satellite W-chromosome 585 chrUn_NT_468670v1 1996 2304 CR1-X 481 + 1996 2304 0 3 170,78,57, 0,170,251, +,+,+, 669418 LINE CR1 585 chrUn_NT_468670v1 7935 9057 CR1-B2 701 + 7935 9057 0 2 224,895, 0,227, +,+, 669422 LINE CR1 585 chrUn_NT_468672v1 1027 1528 GGXHOI 352 - 1027 1528 0 2 229,255, 0,246, -,-, 669429 Satellite W-chromosome 585 chrUn_NT_468673v1 616 5855 GGXHOI 397 - 616 5855 0 5 596,1346,1870,612,674, 0,638,2026,3938,4565, -,-,-,-,-, 669441 Satellite W-chromosome 585 chrUn_NT_468673v1 5969 7146 GGXHOI 384 - 5969 7146 0 2 270,847, 0,330, -,-, 669442 Satellite W-chromosome 585 chrUn_NT_468673v1 7265 11041 GGXHOI 392 - 7265 11041 0 4 1865,679,607,511, 0,1922,2643,3265, -,-,-,-, 669443 Satellite W-chromosome 585 chrUn_NT_468674v1 5161 6512 GGXHOI 321 - 5161 6512 0 3 128,877,255, 0,165,1096, -,-,-, 669451 Satellite W-chromosome 585 chrUn_NT_468674v1 7590 11011 GGXHOI 413 - 7590 11011 0 3 1322,863,1166, 0,1377,2255, -,-,-, 669453 Satellite W-chromosome 585 chrUn_NT_468675v1 4390 5076 GGLTR7A 806 - 4390 5076 0 2 589,88, 0,598, -,-, 669458 LTR ERV1 585 chrUn_NT_468675v1 5074 8527 GGLTR7A 819 + 5074 8527 0 2 2865,587, 0,2866, +,+, 669459 LTR ERV1 585 chrUn_NT_468676v1 1541 3959 GGXHOI 402 + 1541 3959 0 4 1037,811,205,268, 0,1059,1896,2150, +,+,+,+, 669465 Satellite W-chromosome 585 chrUn_NT_468676v1 4319 5679 GGXHOI 310 + 4319 5679 0 4 101,594,307,279, 0,119,748,1081, +,+,+,+, 669467 Satellite W-chromosome 585 chrUn_NT_468676v1 6260 10325 GGXHOI 390 + 6260 10325 0 3 1958,995,1058, 0,1983,3007, +,+,+, 669469 Satellite W-chromosome 585 chrUn_NT_468676v1 10405 11029 GGXHOI 437 + 10405 11029 0 2 370,222, 0,402, +,+, 669470 Satellite W-chromosome 585 chrUn_NT_468678v1 1361 3691 (TCCTCA)n 290 + 1361 3691 0 2 2215,8, 0,2322, +,+, 669474 Simple_repeat Simple_repeat 585 chrUn_NT_468678v1 7150 7273 (C)n 714 + 7150 7273 0 2 36,34, 0,89, +,+, 669482 Simple_repeat Simple_repeat 585 chrUn_NT_468679v1 307 1615 (CCCTAA)n 588 + 307 1615 0 5 193,183,309,180,345, 0,248,442,769,963, +,+,+,+,+, 669488 Simple_repeat Simple_repeat 585 chrUn_NT_468679v1 3026 8574 GGXHOI 403 - 3026 8574 0 4 1762,188,2305,1244, 0,1778,1983,4304, -,-,-,-, 669491 Satellite W-chromosome 585 chrUn_NT_468679v1 8753 11034 GGXHOI 371 - 8753 11034 0 3 1007,828,411, 0,1023,1870, -,-,-, 669492 Satellite W-chromosome 585 chrUn_NT_468680v1 549 927 (CGAGG)n 543 + 549 927 0 2 170,184, 0,194, +,+, 669495 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 1862 2064 (CGAGG)n 515 + 1862 2064 0 2 174,12, 0,190, +,+, 669499 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 2098 2685 (CGAGG)n 515 + 2098 2685 0 2 416,156, 0,431, +,+, 669501 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 2955 4095 (CGAGG)n 517 + 2955 4095 0 4 294,194,178,265, 0,470,679,875, +,+,+,+, 669504 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 4676 5332 (CGAGG)n 513 + 4676 5332 0 2 315,282, 0,374, +,+, 669509 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 5725 6003 (CGAGG)n 520 + 5725 6003 0 2 56,38, 0,240, +,+, 669511 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 6098 7144 (CGAGG)n 521 + 6098 7144 0 2 512,520, 0,526, +,+, 669513 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 7348 7998 (CGAGG)n 565 + 7348 7998 0 3 178,139,153, 0,181,497, +,+,+, 669515 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 8043 8500 (CGAGG)n 541 + 8043 8500 0 2 214,243, 0,214, +,+, 669518 Simple_repeat Simple_repeat 585 chrUn_NT_468680v1 9835 10199 (CGAGG)n 542 + 9835 10199 0 2 177,175, 0,189, +,+, 669526 Simple_repeat Simple_repeat 585 chrUn_NT_468681v1 1899 2522 CR1-H 683 + 1899 2522 0 2 478,139, 0,484, +,+, 669529 LINE CR1 585 chrUn_NT_468683v1 595 800 (GGGACCCATA)n 821 + 595 800 0 3 55,47,55, 0,79,150, +,+,+, 669543 Simple_repeat Simple_repeat 585 chrUn_NT_468685v1 7648 7750 CR1-C2 700 - 7648 7750 0 2 51,51, 0,51, -,-, 669606 LINE CR1 585 chrUn_NT_468685v1 7750 7892 CR1-H2 584 - 7750 7892 0 2 16,53, 0,89, -,-, 669607 LINE CR1 585 chrUn_NT_468685v1 8012 8356 CR1-E 580 - 8012 8356 0 2 60,53, 0,291, -,-, 669610 LINE CR1 585 chrUn_NT_468685v1 8687 8805 CR1-H2 576 - 8687 8805 0 2 81,37, 0,81, -,-, 669617 LINE CR1 585 chrUn_NT_468685v1 9581 9671 CR1-E 728 - 9581 9671 0 2 48,42, 0,48, -,-, 669629 LINE CR1 585 chrUn_NT_468686v1 4274 4475 CR1-X 446 - 4274 4475 0 2 155,46, 0,155, -,-, 669642 LINE CR1 585 chrUn_NT_468687v1 3517 4770 GGXHOI 343 - 3517 4770 0 2 765,429, 0,824, -,-, 669656 Satellite W-chromosome 585 chrUn_NT_468687v1 5327 6522 GGXHOI 373 - 5327 6522 0 3 269,148,747, 0,284,448, -,-,-, 669657 Satellite W-chromosome 585 chrUn_NT_468687v1 7489 10472 GGXHOI 361 - 7489 10472 0 5 148,390,148,1614,513, 0,204,651,816,2470, -,-,-,-,-, 669660 Satellite W-chromosome 585 chrUn_NT_468688v1 2233 8014 GGXHOI 382 - 2233 8014 0 5 1582,473,1122,2187,272, 0,1640,2130,3304,5509, -,-,-,-,-, 669663 Satellite W-chromosome 585 chrUn_NT_468688v1 8851 9759 GGXHOI 350 - 8851 9759 0 2 554,307, 0,601, -,-, 669665 Satellite W-chromosome 585 chrUn_NT_468689v1 7399 8670 CR1-H 600 + 7399 8670 0 2 1158,113, 0,1158, +,+, 669673 LINE CR1 585 chrUn_NT_468691v1 2732 3767 GGXHOI 305 - 2732 3767 0 3 171,632,203, 0,184,832, -,-,-, 669711 Satellite W-chromosome 585 chrUn_NT_468691v1 4094 6081 GGXHOI 396 - 4094 6081 0 4 945,473,306,127, 0,1006,1510,1860, -,-,-,-, 669712 Satellite W-chromosome 585 chrUn_NT_468691v1 6169 7523 GGXHOI 391 - 6169 7523 0 4 382,219,404,258, 0,397,659,1096, -,-,-,-, 669713 Satellite W-chromosome 585 chrUn_NT_468691v1 7812 10111 GGXHOI 403 - 7812 10111 0 2 979,1294, 0,1005, -,-, 669714 Satellite W-chromosome 585 chrUn_NT_468691v1 10260 10969 GGXHOI 425 - 10260 10969 0 2 431,261, 0,448, -,-, 669715 Satellite W-chromosome 585 chrUn_NT_468692v1 1040 1425 GGXHOI 390 - 1040 1425 0 2 139,195, 0,190, -,-, 669717 Satellite W-chromosome 585 chrUn_NT_468692v1 1904 5534 GGXHOI 360 - 1904 5534 0 12 953,135,162,453,299,196,182,137,132,132,364,134, 0,968,1145,1359,1849,2186,2393,2589,2770,2944,3120,3496, -,-,-,-,-,-,-,-,-,-,-,-, 669719 Satellite W-chromosome 585 chrUn_NT_468692v1 5648 6127 GGXHOI 285 - 5648 6127 0 2 191,258, 0,221, -,-, 669720 Satellite W-chromosome 585 chrUn_NT_468692v1 6212 6946 GGXHOI 407 - 6212 6946 0 4 261,125,134,144, 0,279,419,590, -,-,-,-, 669721 Satellite W-chromosome 585 chrUn_NT_468692v1 7685 10706 GGXHOI 357 - 7685 10706 0 8 924,168,221,126,211,130,57,964, 0,937,1153,1411,1587,1846,1988,2057, -,-,-,-,-,-,-,-, 669724 Satellite W-chromosome 585 chrUn_NT_468693v1 7689 8010 (ACCCCATAGGG)n 466 + 7689 8010 0 2 129,134, 0,187, +,+, 669741 Satellite Satellite 585 chrUn_NT_468694v1 898 4570 GGXHOI 417 - 898 4570 0 6 584,251,1429,104,793,313, 0,637,904,2383,2540,3359, -,-,-,-,-,-, 669748 Satellite W-chromosome 585 chrUn_NT_468694v1 4680 8447 GGXHOI 392 - 4680 8447 0 5 967,2025,153,350,196, 0,989,3030,3205,3571, -,-,-,-,-, 669749 Satellite W-chromosome 585 chrUn_NT_468694v1 8623 10416 GGXHOI 394 - 8623 10416 0 4 152,867,461,246, 0,187,1074,1547, -,-,-,-, 669750 Satellite W-chromosome 585 chrUn_NT_468695v1 7950 11014 GGERVL-A-int 668 - 7950 11014 0 2 1293,1771, 0,1293, -,-, 669756 LTR ERVL 585 chrUn_NT_468696v1 3237 6473 GGXHOI 404 - 3237 6473 0 6 227,868,141,403,388,1126, 0,239,1123,1284,1699,2110, -,-,-,-,-,-, 669758 Satellite W-chromosome 585 chrUn_NT_468696v1 6693 10976 GGXHOI 355 - 6693 10976 0 6 906,307,1785,795,211,174, 0,928,1251,3053,3865,4109, -,-,-,-,-,-, 669759 Satellite W-chromosome 585 chrUn_NT_468697v1 1347 5058 GGXHOI 381 - 1347 5058 0 4 1312,987,250,1079, 0,1363,2364,2632, -,-,-,-, 669761 Satellite W-chromosome 585 chrUn_NT_468697v1 5134 5969 GGXHOI 392 - 5134 5969 0 2 315,500, 0,335, -,-, 669762 Satellite W-chromosome 585 chrUn_NT_468697v1 7004 9620 GGXHOI 361 - 7004 9620 0 6 777,148,312,408,481,327, 0,810,1014,1346,1794,2289, -,-,-,-,-,-, 669764 Satellite W-chromosome 585 chrUn_NT_468697v1 9857 11003 GGXHOI 390 - 9857 11003 0 2 743,383, 0,763, -,-, 669765 Satellite W-chromosome 585 chrUn_NT_468698v1 1029 1938 GGXHOI 366 + 1029 1938 0 2 507,344, 0,565, +,+, 669767 Satellite W-chromosome 585 chrUn_NT_468698v1 2743 4778 GGXHOI 400 + 2743 4778 0 4 272,118,1318,231, 0,293,467,1804, +,+,+,+, 669770 Satellite W-chromosome 585 chrUn_NT_468698v1 4961 7009 GGXHOI 391 + 4961 7009 0 3 610,690,683, 0,625,1365, +,+,+, 669771 Satellite W-chromosome 585 chrUn_NT_468698v1 7143 7553 GGXHOI 404 + 7143 7553 0 2 162,233, 0,177, +,+, 669772 Satellite W-chromosome 585 chrUn_NT_468698v1 8154 9947 GGXHOI 368 - 8154 9947 0 2 622,1113, 0,680, -,-, 669773 Satellite W-chromosome 585 chrUn_NT_468699v1 5829 7994 GGLTR7-int 559 + 5829 7994 0 2 103,1596, 0,569, +,+, 669783 LTR ERV1 585 chrUn_NT_468699v1 7994 11006 GGLTR3F1 921 - 7994 11006 0 2 494,2518, 0,494, -,-, 669786 LTR ERVL 585 chrUn_NT_468701v1 3184 8780 GGXHOI 586 + 3184 8780 0 2 780,4579, 0,1017, +,+, 669798 Satellite W-chromosome 585 chrUn_NT_468701v1 8866 10628 GGXHOI 520 + 8866 10628 0 2 63,402, 0,1360, +,+, 669801 Satellite W-chromosome 585 chrUn_NT_468703v1 905 1195 (GCCCCACAGCT)n 264 + 905 1195 0 2 129,113, 0,177, +,+, 669808 Satellite Satellite 585 chrUn_NT_468703v1 6146 6465 (GCCCCACAGCT)n 293 + 6146 6465 0 2 140,150, 0,169, +,+, 669816 Satellite Satellite 585 chrUn_NT_468703v1 6784 7585 (GCCCCACAGCT)n 449 + 6784 7585 0 4 126,293,136,136, 0,137,486,665, +,+,+,+, 669818 Satellite Satellite 585 chrUn_NT_468703v1 7694 8673 (GCCCCACAGCT)n 421 + 7694 8673 0 5 205,142,126,117,288, 0,262,424,562,691, +,+,+,+,+, 669819 Satellite Satellite 585 chrUn_NT_468703v1 9139 9356 (GGCTG)n 316 + 9139 9356 0 2 7,70, 0,147, +,+, 669821 Simple_repeat Simple_repeat 585 chrUn_NT_468703v1 10610 10951 (ACCCATAGGG)n 334 - 10610 10951 0 2 154,158, 0,183, -,-, 669830 Satellite Satellite 585 chrUn_NT_468705v1 5684 5757 G-rich 350 + 5684 5757 0 2 24,20, 0,53, +,+, 669843 Low_complexity Low_complexity 585 chrUn_NT_468706v1 2342 3523 GGXHOI 328 + 2342 3523 0 7 136,132,86,129,264,161,124, 0,177,324,425,570,854,1057, +,+,+,+,+,+,+, 669851 Satellite W-chromosome 585 chrUn_NT_468706v1 3789 4607 GGXHOI 392 + 3789 4607 0 2 144,657, 0,161, +,+, 669852 Satellite W-chromosome 585 chrUn_NT_468706v1 4722 6104 GGXHOI 335 + 4722 6104 0 7 274,130,231,130,129,194,159, 0,289,434,681,861,1005,1223, +,+,+,+,+,+,+, 669853 Satellite W-chromosome 585 chrUn_NT_468706v1 6403 8392 GGXHOI 407 + 6403 8392 0 3 249,934,701, 0,309,1288, +,+,+, 669854 Satellite W-chromosome 585 chrUn_NT_468706v1 8497 10651 GGXHOI 448 + 8497 10651 0 2 982,1158, 0,996, +,+, 669856 Satellite W-chromosome 585 chrUn_NT_468707v1 7106 7738 GGERVK10-int 293 + 7106 7738 0 3 88,141,85, 0,262,547, +,+,+, 669864 LTR ERVK 585 chrUn_NT_468708v1 1327 1826 (CATG)n 317 + 1327 1826 0 2 264,180, 0,319, +,+, 669871 Simple_repeat Simple_repeat 585 chrUn_NT_468711v1 3330 5605 GGXHOI 359 - 3330 5605 0 3 784,1076,387, 0,800,1888, -,-,-, 669895 Satellite W-chromosome 585 chrUn_NT_468711v1 5701 10979 GGXHOI 385 - 5701 10979 0 6 2260,422,243,507,1193,549, 0,2276,2728,2991,3514,4729, -,-,-,-,-,-, 669896 Satellite W-chromosome 585 chrUn_NT_468712v1 1254 4347 GGXHOI 387 - 1254 4347 0 4 132,1612,142,1083, 0,168,1837,2010, -,-,-,-, 669898 Satellite W-chromosome 585 chrUn_NT_468712v1 4445 10420 GGXHOI 423 - 4445 10420 0 2 2874,3083, 0,2892, -,-, 669899 Satellite W-chromosome 585 chrUn_NT_468713v1 1329 2357 GGXHOI 483 - 1329 2357 0 2 713,273, 0,755, -,-, 669903 Satellite W-chromosome 585 chrUn_NT_468713v1 2636 3484 GGXHOI 413 - 2636 3484 0 2 118,719, 0,129, -,-, 669904 Satellite W-chromosome 585 chrUn_NT_468713v1 6447 7907 GGXHOI 527 - 6447 7907 0 2 1040,378, 0,1082, -,-, 669910 Satellite W-chromosome 585 chrUn_NT_468714v1 2948 3693 GGXHOI 349 - 2948 3693 0 2 308,375, 0,370, -,-, 669917 Satellite W-chromosome 585 chrUn_NT_468714v1 4356 5401 GGXHOI 376 - 4356 5401 0 2 515,470, 0,575, -,-, 669919 Satellite W-chromosome 585 chrUn_NT_468714v1 10445 10970 GGXHOI 395 - 10445 10970 0 2 253,256, 0,269, -,-, 669926 Satellite W-chromosome 585 chrUn_NT_468715v1 696 1038 (CCTCG)n 516 + 696 1038 0 2 139,185, 0,157, +,+, 669931 Simple_repeat Simple_repeat 585 chrUn_NT_468715v1 1654 2454 (CCTCG)n 593 + 1654 2454 0 3 360,178,224, 0,374,576, +,+,+, 669936 Simple_repeat Simple_repeat 585 chrUn_NT_468715v1 3154 6180 (CCTCG)n 553 + 3154 6180 0 9 104,71,358,368,177,255,142,241,628, 0,287,389,807,1200,1405,1838,1980,2398, +,+,+,+,+,+,+,+,+, 669942 Simple_repeat Simple_repeat 585 chrUn_NT_468715v1 6250 7192 (CCTCG)n 548 + 6250 7192 0 4 180,209,162,206, 0,180,389,736, +,+,+,+, 669947 Simple_repeat Simple_repeat 585 chrUn_NT_468715v1 8914 9706 (CCTCG)n 586 + 8914 9706 0 3 125,35,275, 0,305,517, +,+,+, 669958 Simple_repeat Simple_repeat 585 chrUn_NT_468715v1 9772 10961 (CCTCG)n 536 + 9772 10961 0 3 358,208,606, 0,358,583, +,+,+, 669962 Simple_repeat Simple_repeat 585 chrUn_NT_468718v1 5237 10200 GGXHOI 373 - 5237 10200 0 3 1631,1430,1818, 0,1673,3145, -,-,-, 669978 Satellite W-chromosome 585 chrUn_NT_468720v1 1221 3503 GGXHOI 390 - 1221 3503 0 5 646,312,146,676,355, 0,703,1073,1236,1927, -,-,-,-,-, 669983 Satellite W-chromosome 585 chrUn_NT_468720v1 6924 7853 GGXHOI 364 - 6924 7853 0 3 500,96,254, 0,525,675, -,-,-, 669987 Satellite W-chromosome 585 chrUn_NT_468720v1 8275 9881 GGXHOI 354 - 8275 9881 0 3 267,145,1152, 0,284,454, -,-,-, 669988 Satellite W-chromosome 585 chrUn_NT_468721v1 8193 8703 GGLTR3F2 698 + 8193 8703 0 2 231,245, 0,265, +,+, 669997 LTR ERVL 585 chrUn_NT_468724v1 988 1043 (ACAA)n 320 + 988 1043 0 2 11,25, 0,30, +,+, 670022 Simple_repeat Simple_repeat 585 chrUn_NT_468727v1 5682 9220 GGLTR7-int 796 + 5682 9220 0 5 1296,331,1531,256,113, 0,1296,1636,3168,3425, +,+,+,+,+, 670054 LTR ERV1 585 chrUn_NT_468729v1 575 931 GGXHOI 309 - 575 931 0 2 170,130, 0,226, -,-, 670067 Satellite W-chromosome 585 chrUn_NT_468729v1 1044 10132 GGXHOI 366 - 1044 10132 0 9 179,332,1889,739,428,671,1906,1683,1025, 0,230,581,2500,3253,3719,4440,6363,8063, -,-,-,-,-,-,-,-,-, 670068 Satellite W-chromosome 585 chrUn_NT_468732v1 8233 8528 CR1-X2 459 + 8233 8528 0 2 63,232, 0,63, +,+, 670085 LINE CR1 585 chrUn_NT_468733v1 8030 10324 CR1-F 915 - 8030 10324 0 3 458,695,1140, 0,459,1154, -,-,-, 670093 LINE CR1 585 chrUn_NT_468734v1 4624 5679 GGXHOI 366 - 4624 5679 0 2 590,432, 0,623, -,-, 670096 Satellite W-chromosome 585 chrUn_NT_468735v1 3459 5626 GGXHOI 385 - 3459 5626 0 4 267,357,145,1333, 0,292,673,834, -,-,-,-, 670104 Satellite W-chromosome 585 chrUn_NT_468735v1 7860 9061 (CCTTG)n 591 + 7860 9061 0 3 185,165,480, 0,203,721, +,+,+, 670111 Simple_repeat Simple_repeat 585 chrUn_NT_468735v1 9220 9947 (CCTTG)n 579 + 9220 9947 0 3 140,212,199, 0,316,528, +,+,+, 670114 Simple_repeat Simple_repeat 585 chrUn_NT_468739v1 2184 3553 (CCTTG)n 652 + 2184 3553 0 6 185,217,56,286,197,186, 0,185,575,652,938,1183, +,+,+,+,+,+, 670131 Simple_repeat Simple_repeat 585 chrUn_NT_468739v1 3624 3987 (CCTTG)n 487 + 3624 3987 0 2 178,174, 0,189, +,+, 670134 Simple_repeat Simple_repeat 585 chrUn_NT_468739v1 5633 6182 (CCTTG)n 480 + 5633 6182 0 2 134,237, 0,312, +,+, 670140 Simple_repeat Simple_repeat 585 chrUn_NT_468739v1 6522 9654 GGLTR7-int 609 + 6522 9654 0 3 1642,1010,103, 0,1744,3029, +,+,+, 670145 LTR ERV1 585 chrUn_NT_468739v1 10201 10941 (CCTTG)n 565 + 10201 10941 0 3 178,198,182, 0,178,558, +,+,+, 670148 Simple_repeat Simple_repeat 585 chrUn_NT_468740v1 645 3633 GGXHOI 383 - 645 3633 0 4 954,479,1201,283, 0,978,1484,2705, -,-,-,-, 670151 Satellite W-chromosome 585 chrUn_NT_468740v1 3721 4302 GGXHOI 400 - 3721 4302 0 3 203,143,158, 0,239,423, -,-,-, 670152 Satellite W-chromosome 585 chrUn_NT_468740v1 4774 5288 GGXHOI 436 - 4774 5288 0 2 363,136, 0,378, -,-, 670154 Satellite W-chromosome 585 chrUn_NT_468740v1 5865 7350 GGXHOI 404 - 5865 7350 0 3 484,657,290, 0,519,1195, -,-,-, 670156 Satellite W-chromosome 585 chrUn_NT_468740v1 7942 8733 GGXHOI 355 - 7942 8733 0 3 158,236,348, 0,196,443, -,-,-, 670158 Satellite W-chromosome 585 chrUn_NT_468740v1 9657 10892 GGXHOI 383 - 9657 10892 0 2 1025,158, 0,1077, -,-, 670161 Satellite W-chromosome 585 chrUn_NT_468743v1 9153 10720 GGXHOI 430 + 9153 10720 0 2 950,606, 0,961, +,+, 670178 Satellite W-chromosome 585 chrUn_NT_468744v1 2508 3473 GGXHOI 526 + 2508 3473 0 2 545,403, 0,562, +,+, 670182 Satellite W-chromosome 585 chrUn_NT_468744v1 5022 9293 GGXHOI 546 + 5022 9293 0 3 203,1836,1553, 0,542,2718, +,+,+, 670186 Satellite W-chromosome 585 chrUn_NT_468744v1 9382 10458 GGXHOI 582 + 9382 10458 0 2 205,532, 0,544, +,+, 670189 Satellite W-chromosome 585 chrUn_NT_468745v1 9763 10941 GGXHOI 578 - 9763 10941 0 2 164,135, 0,1043, -,-, 670203 Satellite W-chromosome 585 chrUn_NT_468748v1 374 745 (CCTTG)n 486 + 374 745 0 2 134,50, 0,321, +,+, 670209 Simple_repeat Simple_repeat 585 chrUn_NT_468748v1 736 2128 (GCCTG)n 558 + 736 2128 0 5 422,22,55,300,35, 0,597,797,879,1357, +,+,+,+,+, 670211 Simple_repeat Simple_repeat 585 chrUn_NT_468748v1 2451 3152 (GCCTG)n 562 + 2451 3152 0 3 88,22,234, 0,265,467, +,+,+, 670218 Simple_repeat Simple_repeat 585 chrUn_NT_468748v1 5675 8109 GGERVL-B-int 706 + 5675 8109 0 2 1932,502, 0,1932, +,+, 670225 LTR ERVL 585 chrUn_NT_468748v1 8780 10186 GGLTR7-int 323 + 8780 10186 0 3 101,238,283, 0,127,1123, +,+,+, 670227 LTR ERV1 585 chrUn_NT_468750v1 645 2015 GGXHOI 368 + 645 2015 0 2 876,431, 0,939, +,+, 670241 Satellite W-chromosome 585 chrUn_NT_468750v1 2394 4110 GGXHOI 376 + 2394 4110 0 3 1186,144,352, 0,1203,1364, +,+,+, 670242 Satellite W-chromosome 585 chrUn_NT_468750v1 4209 6210 GGXHOI 389 + 4209 6210 0 3 520,928,516, 0,540,1485, +,+,+, 670243 Satellite W-chromosome 585 chrUn_NT_468750v1 6391 8300 GGXHOI 380 + 6391 8300 0 3 1377,146,352, 0,1394,1557, +,+,+, 670244 Satellite W-chromosome 585 chrUn_NT_468750v1 9941 10375 GGXHOI 404 + 9941 10375 0 2 148,270, 0,164, +,+, 670246 Satellite W-chromosome 585 chrUn_NT_468751v1 389 1968 (CAAGG)n 677 + 389 1968 0 6 178,78,43,213,464,203, 0,198,459,524,737,1376, +,+,+,+,+,+, 670250 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 1885 2242 (CTAGG)n 442 + 1885 2242 0 2 152,20, 0,337, +,+, 670253 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 2268 3031 (CAAGG)n 610 + 2268 3031 0 4 227,186,88,183, 0,274,478,580, +,+,+,+, 670255 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 3440 4204 (CAAGG)n 577 + 3440 4204 0 3 192,227,111, 0,249,653, +,+,+, 670259 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 3916 4291 (CAGGC)n 447 + 3916 4291 0 2 177,198, 0,177, +,+, 670260 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 5481 6219 (CAAGG)n 560 + 5481 6219 0 2 145,417, 0,321, +,+, 670265 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 6655 8357 (CAAGG)n 546 + 6655 8357 0 6 177,363,178,216,360,218, 0,191,612,850,1087,1484, +,+,+,+,+,+, 670271 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 8720 9482 (CAAGG)n 649 + 8720 9482 0 3 173,177,369, 0,190,393, +,+,+, 670275 Simple_repeat Simple_repeat 585 chrUn_NT_468751v1 9494 10856 (CAAGG)n 634 + 9494 10856 0 3 103,99,816, 0,417,546, +,+,+, 670277 Simple_repeat Simple_repeat 585 chrUn_NT_468752v1 2338 2845 GGLTR3F2 658 - 2338 2845 0 2 247,230, 0,277, -,-, 670284 LTR ERVL 585 chrUn_NT_468754v1 1143 3538 GGXHOI 350 + 1143 3538 0 3 531,990,762, 0,583,1633, +,+,+, 670300 Satellite W-chromosome 585 chrUn_NT_468754v1 4024 5685 GGXHOI 325 + 4024 5685 0 4 697,225,289,331, 0,738,1019,1330, +,+,+,+, 670302 Satellite W-chromosome 585 chrUn_NT_468754v1 5766 9559 GGXHOI 385 + 5766 9559 0 4 2166,150,1065,335, 0,2179,2352,3458, +,+,+,+, 670303 Satellite W-chromosome 585 chrUn_NT_468755v1 1150 10374 GGXHOI 368 - 1150 10374 0 3 2457,5926,800, 0,2482,8424, -,-,-, 670306 Satellite W-chromosome 585 chrUn_NT_468757v1 7564 10412 Char12Mar1_GG 445 - 7564 10412 0 2 958,251, 0,2597, -,-, 670323 DNA hAT-Charlie 585 chrUn_NT_468758v1 3603 3696 (TTTGC)n 398 + 3603 3696 0 2 21,22, 0,71, +,+, 670332 Simple_repeat Simple_repeat 585 chrUn_NT_468758v1 9700 9991 G-rich 504 + 9700 9991 0 2 69,193, 0,98, +,+, 670347 Low_complexity Low_complexity 585 chrUn_NT_468759v1 5608 5804 (TCTCC)n 800 + 5608 5804 0 2 83,81, 0,115, +,+, 670372 Simple_repeat Simple_repeat 585 chrUn_NT_468761v1 4064 5847 GGXHOI 364 - 4064 5847 0 2 289,1453, 0,330, -,-, 670438 Satellite W-chromosome 585 chrUn_NT_468761v1 9784 10518 GGXHOI 390 - 9784 10518 0 2 188,531, 0,203, -,-, 670443 Satellite W-chromosome 585 chrUn_NT_468762v1 7058 8596 (ACCCATAGGG)n 668 - 7058 8596 0 7 120,69,79,436,255,11,17, 0,140,390,469,905,1253,1521, -,-,-,-,-,-,-, 670447 Satellite Satellite 585 chrUn_NT_468762v1 8322 8579 (ACCCATAGAG)n 570 + 8322 8579 0 2 94,28, 0,229, +,+, 670452 Satellite Satellite 585 chrUn_NT_468762v1 8735 9423 (ACCCATAGGG)n 763 - 8735 9423 0 3 123,80,361, 0,224,327, -,-,-, 670455 Satellite Satellite 585 chrUn_NT_468762v1 9611 10189 (CTCTATGGGG)n 748 - 9611 10189 0 2 160,70, 0,508, -,-, 670459 Satellite Satellite 585 chrUn_NT_468762v1 9771 10119 (ACCCATAGAG)n 710 - 9771 10119 0 2 129,56, 0,292, -,-, 670460 Satellite Satellite 585 chrUn_NT_468762v1 10151 10372 (ACCCATAGAG)n 542 - 10151 10372 0 2 80,25, 0,196, -,-, 670462 Satellite Satellite 585 chrUn_NT_468764v1 1115 2698 (CGAGG)n 516 + 1115 2698 0 5 346,598,193,178,200, 0,362,980,1205,1383, +,+,+,+,+, 670477 Simple_repeat Simple_repeat 585 chrUn_NT_468764v1 2788 3392 (CGAGG)n 496 + 2788 3392 0 2 342,82, 0,522, +,+, 670479 Simple_repeat Simple_repeat 585 chrUn_NT_468764v1 4377 5321 (CGAGG)n 520 + 4377 5321 0 4 175,117,15,355, 0,238,534,589, +,+,+,+, 670482 Simple_repeat Simple_repeat 585 chrUn_NT_468764v1 5460 6550 (CGAGG)n 476 + 5460 6550 0 2 182,873, 0,217, +,+, 670484 Simple_repeat Simple_repeat 585 chrUn_NT_468764v1 6565 9979 (CGAGG)n 533 + 6565 9979 0 7 1245,660,306,177,181,429,177, 0,1281,1981,2298,2534,2755,3237, +,+,+,+,+,+,+, 670486 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 260 379 (GAGGC)n 404 + 260 379 0 2 15,69, 0,50, +,+, 670494 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 384 1195 (CGAGG)n 519 + 384 1195 0 3 359,189,179, 0,414,632, +,+,+, 670496 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 1299 2441 (CGAGG)n 527 + 1299 2441 0 4 485,166,182,186, 0,543,724,956, +,+,+,+, 670498 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 2530 3711 (CGAGG)n 543 + 2530 3711 0 3 789,175,170, 0,811,1011, +,+,+, 670499 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 3887 5033 (CGAGG)n 543 + 3887 5033 0 4 178,416,318,176, 0,178,638,970, +,+,+,+, 670502 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 5124 7217 (CGAGG)n 551 + 5124 7217 0 7 178,204,219,288,375,334,177, 0,232,436,832,1164,1553,1916, +,+,+,+,+,+,+, 670504 Simple_repeat Simple_repeat 585 chrUn_NT_468766v1 7289 8707 (CGAGG)n 493 + 7289 8707 0 3 629,328,421, 0,649,997, +,+,+, 670506 Simple_repeat Simple_repeat 585 chrUn_NT_468768v1 5970 6387 (CAAGG)n 563 + 5970 6387 0 2 211,181, 0,236, +,+, 670528 Simple_repeat Simple_repeat 585 chrUn_NT_468768v1 6466 6843 (CAAGG)n 596 + 6466 6843 0 2 176,179, 0,198, +,+, 670530 Simple_repeat Simple_repeat 585 chrUn_NT_468768v1 7814 8695 (CAAGG)n 629 + 7814 8695 0 3 238,43,418, 0,420,463, +,+,+, 670536 Simple_repeat Simple_repeat 585 chrUn_NT_468768v1 8585 8943 (CAGGC)n 548 + 8585 8943 0 2 159,21, 0,337, +,+, 670538 Simple_repeat Simple_repeat 585 chrUn_NT_468768v1 8973 9915 (CAAGG)n 655 + 8973 9915 0 3 207,169,507, 0,241,435, +,+,+, 670540 Simple_repeat Simple_repeat 585 chrUn_NT_468768v1 9931 10906 (CAAGG)n 624 + 9931 10906 0 3 369,133,271, 0,392,704, +,+,+, 670542 Simple_repeat Simple_repeat 585 chrUn_NT_468770v1 1469 2207 GGXHOI 378 - 1469 2207 0 2 348,370, 0,368, -,-, 670556 Satellite W-chromosome 585 chrUn_NT_468770v1 3402 4150 GGXHOI 378 - 3402 4150 0 2 358,370, 0,378, -,-, 670559 Satellite W-chromosome 585 chrUn_NT_468770v1 6222 7135 GGXHOI 383 - 6222 7135 0 2 523,370, 0,543, -,-, 670564 Satellite W-chromosome 585 chrUn_NT_468770v1 7758 10456 GGXHOI 409 - 7758 10456 0 6 354,69,361,284,935,480, 0,409,541,922,1226,2218, -,-,-,-,-,-, 670566 Satellite W-chromosome 585 chrUn_NT_468771v1 3505 5330 GGXHOI 386 + 3505 5330 0 2 748,1061, 0,764, +,+, 670573 Satellite W-chromosome 585 chrUn_NT_468771v1 6237 9572 GGXHOI 392 + 6237 9572 0 4 887,911,934,504, 0,898,1856,2831, +,+,+,+, 670575 Satellite W-chromosome 585 chrUn_NT_468772v1 549 5312 GGXHOI 536 - 549 5312 0 7 379,325,131,328,166,339,727, 0,603,1273,1738,2705,3113,4036, -,-,-,-,-,-,-, 670580 Satellite W-chromosome 585 chrUn_NT_468772v1 5324 9643 GGXHOI 560 - 5324 9643 0 3 765,117,678, 0,1921,3641, -,-,-, 670588 Satellite W-chromosome 585 chrUn_NT_468772v1 9687 10910 GGXHOI 584 - 9687 10910 0 2 532,252, 0,971, -,-, 670592 Satellite W-chromosome 585 chrUn_NT_468776v1 2642 3636 GGXHOI 394 - 2642 3636 0 2 648,331, 0,663, -,-, 670626 Satellite W-chromosome 585 chrUn_NT_468776v1 3746 4698 GGXHOI 391 - 3746 4698 0 2 606,331, 0,621, -,-, 670627 Satellite W-chromosome 585 chrUn_NT_468776v1 4782 6229 GGXHOI 407 - 4782 6229 0 2 642,751, 0,696, -,-, 670628 Satellite W-chromosome 585 chrUn_NT_468776v1 6343 8409 GGXHOI 414 - 6343 8409 0 3 1636,148,249, 0,1655,1817, -,-,-, 670629 Satellite W-chromosome 585 chrUn_NT_468776v1 8492 10557 GGXHOI 387 - 8492 10557 0 3 558,1136,332, 0,577,1733, -,-,-, 670630 Satellite W-chromosome 585 chrUn_NT_468777v1 4546 5612 (GCCCCACAGCT)n 746 + 4546 5612 0 3 769,131,132, 0,780,934, +,+,+, 670637 Satellite Satellite 585 chrUn_NT_468777v1 5707 10896 (GCCCCACAGCT)n 735 + 5707 10896 0 16 130,611,559,35,199,131,122,318,375,23,130,132,320,176,329,645, 0,186,813,1501,1664,1908,2051,2302,2632,3136,3215,3368,3511,3961,4160,4544, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 670638 Satellite Satellite 585 chrUn_NT_468779v1 1846 3052 GGXHOI 298 - 1846 3052 0 2 447,736, 0,470, -,-, 670651 Satellite W-chromosome 585 chrUn_NT_468779v1 3138 7962 GGXHOI 364 - 3138 7962 0 3 1640,2337,807, 0,1663,4017, -,-,-, 670652 Satellite W-chromosome 585 chrUn_NT_468779v1 9402 10880 GGXHOI 381 - 9402 10880 0 3 225,949,227, 0,285,1251, -,-,-, 670655 Satellite W-chromosome 585 chrUn_NT_468781v1 6203 10838 GGXHOI 391 - 6203 10838 0 9 629,273,149,381,299,300,624,1031,743, 0,651,945,1110,1531,1874,2203,2845,3892, -,-,-,-,-,-,-,-,-, 670672 Satellite W-chromosome 585 chrUn_NT_468782v1 7456 7817 (ACCCCATAGGG)n 288 + 7456 7817 0 2 190,148, 0,213, +,+, 670685 Satellite Satellite 585 chrUn_NT_468783v1 5470 7211 GGERVL-A-int 747 - 5470 7211 0 2 1285,456, 0,1285, -,-, 670694 LTR ERVL 585 chrUn_NT_468784v1 1566 6218 GGXHOI 418 + 1566 6218 0 9 154,516,268,422,552,245,1825,238,183, 0,210,748,1033,1471,2070,2333,4213,4469, +,+,+,+,+,+,+,+,+, 670699 Satellite W-chromosome 585 chrUn_NT_468784v1 6631 9559 GGXHOI 372 + 6631 9559 0 4 788,767,378,906, 0,804,1588,2022, +,+,+,+, 670701 Satellite W-chromosome 585 chrUn_NT_468784v1 9817 10795 GGXHOI 373 + 9817 10795 0 2 373,581, 0,397, +,+, 670702 Satellite W-chromosome 585 chrUn_NT_468787v1 4317 6079 GGERVL-A-int 748 + 4317 6079 0 2 457,1305, 0,457, +,+, 670706 LTR ERVL 585 chrUn_NT_468788v1 7737 10874 GGXHOI 343 - 7737 10874 0 2 2555,527, 0,2610, -,-, 670723 Satellite W-chromosome 585 chrUn_NT_468789v1 5598 10870 GGXHOI 348 - 5598 10870 0 4 1536,451,1054,2164, 0,1552,2037,3108, -,-,-,-, 670725 Satellite W-chromosome 585 chrUn_NT_468790v1 848 5250 GGXHOI 388 + 848 5250 0 7 452,447,451,1450,442,912,117, 0,468,935,1403,2897,3359,4285, +,+,+,+,+,+,+, 670727 Satellite W-chromosome 585 chrUn_NT_468790v1 5674 8116 GGXHOI 404 + 5674 8116 0 3 1164,979,238, 0,1185,2204, +,+,+, 670728 Satellite W-chromosome 585 chrUn_NT_468791v1 5027 5410 (CAAGG)n 577 + 5027 5410 0 2 182,201, 0,182, +,+, 670737 Simple_repeat Simple_repeat 585 chrUn_NT_468791v1 6895 7598 (CAAGG)n 606 + 6895 7598 0 2 323,201, 0,502, +,+, 670748 Simple_repeat Simple_repeat 585 chrUn_NT_468794v1 569 1620 GGXHOI 392 + 569 1620 0 2 472,516, 0,535, +,+, 670772 Satellite W-chromosome 585 chrUn_NT_468794v1 1719 2770 GGXHOI 392 + 1719 2770 0 2 472,516, 0,535, +,+, 670773 Satellite W-chromosome 585 chrUn_NT_468794v1 2869 3920 GGXHOI 392 + 2869 3920 0 2 472,516, 0,535, +,+, 670774 Satellite W-chromosome 585 chrUn_NT_468794v1 4019 5563 GGXHOI 387 + 4019 5563 0 2 472,1009, 0,535, +,+, 670775 Satellite W-chromosome 585 chrUn_NT_468796v1 1782 3084 CR1-X 403 - 1782 3084 0 2 156,89, 0,1213, -,-, 670795 LINE CR1 585 chrUn_NT_468796v1 8464 9611 CR1-B2 626 + 8464 9611 0 2 229,915, 0,232, +,+, 670799 LINE CR1 585 chrUn_NT_468797v1 2200 8410 GGXHOI 554 - 2200 8410 0 9 193,22,197,279,313,279,116,92,736, 0,796,835,1981,3873,4229,4992,5149,5474, -,-,-,-,-,-,-,-,-, 670806 Satellite W-chromosome 585 chrUn_NT_468797v1 8427 10861 GGXHOI 588 - 8427 10861 0 2 449,271, 0,2163, -,-, 670813 Satellite W-chromosome 585 chrUn_NT_468798v1 1118 4494 GGXHOI 426 + 1118 4494 0 3 314,1351,1677, 0,329,1699, +,+,+, 670816 Satellite W-chromosome 585 chrUn_NT_468798v1 6863 10838 GGXHOI 436 + 6863 10838 0 2 3000,963, 0,3012, +,+, 670819 Satellite W-chromosome 585 chrUn_NT_468799v1 4397 5448 GGXHOI 392 + 4397 5448 0 2 472,516, 0,535, +,+, 670827 Satellite W-chromosome 585 chrUn_NT_468801v1 6222 9572 GGXHOI 367 - 6222 9572 0 7 556,317,317,367,133,984,481, 0,603,943,1279,1689,1871,2869, -,-,-,-,-,-,-, 670849 Satellite W-chromosome 585 chrUn_NT_468803v1 3442 4031 CR1-H 600 - 3442 4031 0 2 130,441, 0,148, -,-, 670857 LINE CR1 585 chrUn_NT_468803v1 6610 7019 CR1-H 441 - 6610 7019 0 2 162,247, 0,162, -,-, 670860 LINE CR1 585 chrUn_NT_468804v1 2856 3254 A-rich 604 + 2856 3254 0 2 301,38, 0,360, +,+, 670875 Low_complexity Low_complexity 585 chrUn_NT_468804v1 5930 6425 A-rich 527 + 5930 6425 0 2 401,52, 0,443, +,+, 670884 Low_complexity Low_complexity 585 chrUn_NT_468806v1 793 3230 GGLTR7-int 581 - 793 3230 0 2 784,342, 0,2095, -,-, 670904 LTR ERV1 585 chrUn_NT_468806v1 7052 7302 G-rich 370 + 7052 7302 0 2 38,160, 0,90, +,+, 670909 Low_complexity Low_complexity 585 chrUn_NT_468808v1 3101 4148 GGXHOI 387 + 3101 4148 0 2 470,516, 0,531, +,+, 670923 Satellite W-chromosome 585 chrUn_NT_468808v1 4773 6889 GGXHOI 382 + 4773 6889 0 2 1046,1007, 0,1109, +,+, 670925 Satellite W-chromosome 585 chrUn_NT_468808v1 8162 9228 GGXHOI 373 + 8162 9228 0 2 169,860, 0,206, +,+, 670927 Satellite W-chromosome 585 chrUn_NT_468808v1 9330 10838 GGXHOI 382 + 9330 10838 0 2 1039,406, 0,1102, +,+, 670928 Satellite W-chromosome 585 chrUn_NT_468809v1 690 921 (ACCCATAGAG)n 321 + 690 921 0 2 82,45, 0,186, +,+, 670934 Satellite Satellite 585 chrUn_NT_468809v1 1039 1244 (ACCCATAGGG)n 308 + 1039 1244 0 2 86,52, 0,153, +,+, 670937 Satellite Satellite 585 chrUn_NT_468809v1 1925 2125 (ACCCATAGAG)n 358 + 1925 2125 0 2 82,38, 0,162, +,+, 670943 Satellite Satellite 585 chrUn_NT_468809v1 2267 2498 (ACCCATAGGG)n 398 + 2267 2498 0 2 82,39, 0,192, +,+, 670946 Satellite Satellite 585 chrUn_NT_468809v1 2655 2870 (ACCCATAGAG)n 418 + 2655 2870 0 2 76,49, 0,166, +,+, 670949 Satellite Satellite 585 chrUn_NT_468809v1 2992 3191 (ACCCATAGGG)n 352 + 2992 3191 0 2 81,44, 0,155, +,+, 670952 Satellite Satellite 585 chrUn_NT_468809v1 3325 3525 (ACCCATAGGG)n 322 + 3325 3525 0 2 91,35, 0,165, +,+, 670955 Satellite Satellite 585 chrUn_NT_468809v1 3713 3907 (ACCCATAGAG)n 410 + 3713 3907 0 2 76,53, 0,141, +,+, 670958 Satellite Satellite 585 chrUn_NT_468809v1 4056 4329 (ACCCATAGGG)n 436 + 4056 4329 0 2 87,86, 0,187, +,+, 670961 Satellite Satellite 585 chrUn_NT_468809v1 4636 4861 (ACCCATAGAG)n 322 + 4636 4861 0 2 76,49, 0,176, +,+, 670966 Satellite Satellite 585 chrUn_NT_468809v1 5489 6138 (ACCCATAGAG)n 336 + 5489 6138 0 4 111,88,99,35, 0,212,407,614, +,+,+,+, 670970 Satellite Satellite 585 chrUn_NT_468809v1 6256 6477 (ACCCATAGGG)n 330 + 6256 6477 0 2 82,36, 0,185, +,+, 670975 Satellite Satellite 585 chrUn_NT_468809v1 6605 6811 (ACCCATAGGG)n 308 + 6605 6811 0 2 86,52, 0,154, +,+, 670978 Satellite Satellite 585 chrUn_NT_468809v1 7150 7366 (ACCCATAGAG)n 370 + 7150 7366 0 2 77,45, 0,171, +,+, 670982 Satellite Satellite 585 chrUn_NT_468809v1 7517 7717 (ACCCATAGAG)n 358 + 7517 7717 0 2 82,38, 0,162, +,+, 670985 Satellite Satellite 585 chrUn_NT_468809v1 7858 8089 (ACCCATAGGG)n 398 + 7858 8089 0 2 82,39, 0,192, +,+, 670988 Satellite Satellite 585 chrUn_NT_468809v1 8246 8461 (ACCCATAGAG)n 418 + 8246 8461 0 2 76,49, 0,166, +,+, 670991 Satellite Satellite 585 chrUn_NT_468809v1 9202 9395 (ACCCATAGAG)n 404 + 9202 9395 0 2 75,53, 0,140, +,+, 670997 Satellite Satellite 585 chrUn_NT_468809v1 9742 9970 (ACCCATAGGG)n 368 + 9742 9970 0 2 73,48, 0,180, +,+, 671002 Satellite Satellite 585 chrUn_NT_468809v1 10094 10308 (ACCCATAGAG)n 340 + 10094 10308 0 2 63,55, 0,159, +,+, 671004 Satellite Satellite 585 chrUn_NT_468809v1 10459 10692 (ACCCATAGAG)n 280 + 10459 10692 0 2 83,49, 0,184, +,+, 671007 Satellite Satellite 585 chrUn_NT_468811v1 276 1388 GGXHOI 516 - 276 1388 0 2 21,697, 0,415, -,-, 671015 Satellite W-chromosome 585 chrUn_NT_468811v1 2121 3143 GGXHOI 471 - 2121 3143 0 3 450,393,150, 0,463,872, -,-,-, 671018 Satellite W-chromosome 585 chrUn_NT_468811v1 3371 4255 GGXHOI 532 - 3371 4255 0 2 377,117, 0,767, -,-, 671019 Satellite W-chromosome 585 chrUn_NT_468811v1 4375 6528 GGXHOI 542 - 4375 6528 0 4 510,579,222,168, 0,521,1379,1985, -,-,-,-, 671021 Satellite W-chromosome 585 chrUn_NT_468811v1 6597 7667 GGXHOI 564 - 6597 7667 0 2 530,150, 0,920, -,-, 671024 Satellite W-chromosome 585 chrUn_NT_468811v1 7755 9922 GGXHOI 558 - 7755 9922 0 8 33,219,44,160,23,42,21,250, 0,313,774,857,1078,1521,1579,1917, -,-,-,-,-,-,-,-, 671026 Satellite W-chromosome 585 chrUn_NT_468811v1 10188 10756 Sat-CR1_GG 198 - 10188 10756 0 2 278,263, 0,305, -,-, 671032 Satellite Satellite 585 chrUn_NT_468812v1 5268 5549 G-rich 427 + 5268 5549 0 2 80,175, 0,106, +,+, 671041 Low_complexity Low_complexity 585 chrUn_NT_468813v1 3580 5204 (TTAGGG)n 633 + 3580 5204 0 7 181,262,66,213,197,133,50, 0,181,631,722,991,1240,1574, +,+,+,+,+,+,+, 671048 Simple_repeat Simple_repeat 585 chrUn_NT_468813v1 5278 6471 (TTAGGG)n 584 + 5278 6471 0 5 171,183,203,284,234, 0,227,472,675,959, +,+,+,+,+, 671052 Simple_repeat Simple_repeat 585 chrUn_NT_468813v1 6558 7131 (TTAGGG)n 486 + 6558 7131 0 2 202,359, 0,214, +,+, 671054 Simple_repeat Simple_repeat 585 chrUn_NT_468813v1 8187 8820 (CCCTAA)n 571 + 8187 8820 0 2 178,426, 0,207, +,+, 671060 Simple_repeat Simple_repeat 585 chrUn_NT_468813v1 8831 9240 (CCCTAA)n 591 + 8831 9240 0 2 178,231, 0,178, +,+, 671062 Simple_repeat Simple_repeat 585 chrUn_NT_468813v1 9287 9946 (CCCTAA)n 626 + 9287 9946 0 2 273,357, 0,302, +,+, 671064 Simple_repeat Simple_repeat 585 chrUn_NT_468813v1 9974 10837 (CCCTAA)n 610 + 9974 10837 0 3 198,262,102, 0,240,761, +,+,+, 671066 Simple_repeat Simple_repeat 585 chrUn_NT_468814v1 4163 5214 GGXHOI 378 - 4163 5214 0 2 516,472, 0,579, -,-, 671074 Satellite W-chromosome 585 chrUn_NT_468814v1 8270 9812 GGXHOI 376 - 8270 9812 0 2 1007,472, 0,1070, -,-, 671079 Satellite W-chromosome 585 chrUn_NT_468816v1 3640 4959 GGXHOI 404 + 3640 4959 0 2 349,953, 0,366, +,+, 671088 Satellite W-chromosome 585 chrUn_NT_468816v1 5029 9481 GGXHOI 412 + 5029 9481 0 6 452,359,519,481,456,2002, 0,500,915,1455,1978,2450, +,+,+,+,+,+, 671089 Satellite W-chromosome 585 chrUn_NT_468816v1 9722 10834 GGXHOI 410 + 9722 10834 0 2 156,937, 0,175, +,+, 671090 Satellite W-chromosome 585 chrUn_NT_468818v1 2415 4989 GGXHOI 428 + 2415 4989 0 2 1413,1144, 0,1430, +,+, 671095 Satellite W-chromosome 585 chrUn_NT_468818v1 5099 9649 GGXHOI 327 + 5099 9649 0 10 458,1278,312,137,166,146,889,420,351,239, 0,475,1768,2104,2256,2441,2602,3505,3946,4311, +,+,+,+,+,+,+,+,+,+, 671096 Satellite W-chromosome 585 chrUn_NT_468818v1 9725 10297 GGXHOI 441 + 9725 10297 0 2 99,457, 0,115, +,+, 671097 Satellite W-chromosome 585 chrUn_NT_468818v1 10367 10836 GGXHOI 304 + 10367 10836 0 2 114,344, 0,125, +,+, 671098 Satellite W-chromosome 585 chrUn_NT_468821v1 2010 3209 GGXHOI 409 + 2010 3209 0 2 447,729, 0,470, +,+, 671130 Satellite W-chromosome 585 chrUn_NT_468821v1 5909 7824 GGXHOI 387 + 5909 7824 0 2 1667,232, 0,1683, +,+, 671135 Satellite W-chromosome 585 chrUn_NT_468821v1 9807 10803 GGXHOI 362 + 9807 10803 0 2 490,484, 0,512, +,+, 671139 Satellite W-chromosome 585 chrUn_NT_468822v1 6527 7152 CR1-H 652 - 6527 7152 0 2 137,482, 0,143, -,-, 671146 LINE CR1 585 chrUn_NT_468822v1 9688 10147 CR1-H 661 - 9688 10147 0 2 162,297, 0,162, -,-, 671150 LINE CR1 585 chrUn_NT_468823v1 1213 2001 GGXHOI 399 + 1213 2001 0 2 433,338, 0,450, +,+, 671152 Satellite W-chromosome 585 chrUn_NT_468823v1 2310 4604 GGXHOI 345 + 2310 4604 0 3 861,515,814, 0,911,1480, +,+,+, 671154 Satellite W-chromosome 585 chrUn_NT_468823v1 5347 8219 GGXHOI 380 + 5347 8219 0 4 960,1225,144,484, 0,978,2225,2388, +,+,+,+, 671156 Satellite W-chromosome 585 chrUn_NT_468823v1 8343 8767 GGXHOI 384 + 8343 8767 0 2 190,172, 0,252, +,+, 671157 Satellite W-chromosome 585 chrUn_NT_468823v1 8862 9751 GGXHOI 378 + 8862 9751 0 2 453,416, 0,473, +,+, 671158 Satellite W-chromosome 585 chrUn_NT_468823v1 9875 10718 GGXHOI 394 + 9875 10718 0 2 373,411, 0,432, +,+, 671159 Satellite W-chromosome 585 chrUn_NT_468825v1 4454 4735 (ACCCCATAGGG)n 668 - 4454 4735 0 2 120,120, 0,161, -,-, 671164 Satellite Satellite 585 chrUn_NT_468828v1 9338 10812 GGLTR7-int 446 - 9338 10812 0 3 276,917,93, 0,323,1381, -,-,-, 671185 LTR ERV1 585 chrUn_NT_468829v1 7092 8773 CR1-G 516 + 7092 8773 0 3 590,155,367, 0,844,1314, +,+,+, 671188 LINE CR1 585 chrUn_NT_468830v1 9984 10811 CR1-F2 728 - 9984 10811 0 2 512,106, 0,721, -,-, 671205 LINE CR1 585 chrUn_NT_468831v1 5680 6051 (ACCCATTGGG)n 495 - 5680 6051 0 2 177,135, 0,236, -,-, 671207 Satellite Satellite 585 chrUn_NT_468831v1 6284 6629 (ACCCATAGGG)n 455 - 6284 6629 0 2 132,161, 0,184, -,-, 671209 Satellite Satellite 585 chrUn_NT_468831v1 7036 7313 (ACCCCATAGGG)n 361 - 7036 7313 0 2 121,123, 0,154, -,-, 671211 Satellite Satellite 585 chrUn_NT_468833v1 1148 2930 (CGAGG)n 513 + 1148 2930 0 5 113,609,203,68,237, 0,291,1076,1461,1545, +,+,+,+,+, 671256 Simple_repeat Simple_repeat 585 chrUn_NT_468833v1 4859 5392 (CGAGG)n 527 + 4859 5392 0 2 183,325, 0,208, +,+, 671268 Simple_repeat Simple_repeat 585 chrUn_NT_468833v1 7853 8624 (CGAGG)n 503 + 7853 8624 0 3 182,179,332, 0,203,439, +,+,+, 671277 Simple_repeat Simple_repeat 585 chrUn_NT_468833v1 8709 9054 (CGAGG)n 462 + 8709 9054 0 2 146,181, 0,164, +,+, 671279 Simple_repeat Simple_repeat 585 chrUn_NT_468833v1 9216 9836 (CGAGG)n 518 + 9216 9836 0 3 179,181,173, 0,240,447, +,+,+, 671280 Simple_repeat Simple_repeat 585 chrUn_NT_468835v1 9427 10803 GGXHOI 387 - 9427 10803 0 3 175,554,607, 0,193,769, -,-,-, 671294 Satellite W-chromosome 585 chrUn_NT_468836v1 4000 4739 (CAAGG)n 591 + 4000 4739 0 3 170,59,178, 0,458,561, +,+,+, 671297 Simple_repeat Simple_repeat 585 chrUn_NT_468836v1 4962 5715 (CAAGG)n 579 + 4962 5715 0 3 179,25,174, 0,492,579, +,+,+, 671301 Simple_repeat Simple_repeat 585 chrUn_NT_468836v1 6069 7586 (CAAGG)n 652 + 6069 7586 0 2 514,293, 0,1224, +,+, 671308 Simple_repeat Simple_repeat 585 chrUn_NT_468836v1 7563 7991 (CAAGG)n 659 + 7563 7991 0 2 218,210, 0,218, +,+, 671311 Simple_repeat Simple_repeat 585 chrUn_NT_468836v1 8333 9120 GGXHOI 389 + 8333 9120 0 2 154,606, 0,181, +,+, 671314 Satellite W-chromosome 585 chrUn_NT_468838v1 1334 4068 GGXHOI 584 - 1334 4068 0 3 199,1200,943, 0,403,1791, -,-,-, 671320 Satellite W-chromosome 585 chrUn_NT_468841v1 603 1390 GGXHOI 350 + 603 1390 0 2 264,507, 0,280, +,+, 671339 Satellite W-chromosome 585 chrUn_NT_468841v1 1470 4453 GGXHOI 373 + 1470 4453 0 3 2252,252,435, 0,2279,2548, +,+,+, 671340 Satellite W-chromosome 585 chrUn_NT_468841v1 4585 10132 GGXHOI 380 + 4585 10132 0 4 904,2203,501,1895, 0,920,3135,3652, +,+,+,+, 671341 Satellite W-chromosome 585 chrUn_NT_468841v1 10215 10771 GGXHOI 327 + 10215 10771 0 2 404,135, 0,421, +,+, 671342 Satellite W-chromosome 585 chrUn_NT_468842v1 9506 10789 CR1-F 711 - 9506 10789 0 2 64,1173, 0,110, -,-, 671348 LINE CR1 585 chrUn_NT_468843v1 4523 5058 CR1-H 653 - 4523 5058 0 2 140,379, 0,156, -,-, 671354 LINE CR1 585 chrUn_NT_468843v1 7831 8288 CR1-H 677 - 7831 8288 0 2 163,294, 0,163, -,-, 671358 LINE CR1 585 chrUn_NT_468844v1 2556 5011 GGLTR7-int 571 + 2556 5011 0 2 351,794, 0,1661, +,+, 671365 LTR ERV1 585 chrUn_NT_468844v1 5023 7452 GGERV10_LTR 822 - 5023 7452 0 2 38,41, 0,2388, -,-, 671368 LTR ERVL 585 chrUn_NT_468844v1 5192 7408 GGLTR10D-int 916 - 5192 7408 0 2 364,1848, 0,368, -,-, 671369 LTR ERVK 585 chrUn_NT_468844v1 7458 8341 (CGAGG)n 544 + 7458 8341 0 2 148,559, 0,324, +,+, 671370 Simple_repeat Simple_repeat 585 chrUn_NT_468844v1 9406 9768 (CGAGG)n 520 + 9406 9768 0 2 188,157, 0,205, +,+, 671377 Simple_repeat Simple_repeat 585 chrUn_NT_468844v1 10128 10502 (CAAGG)n 395 + 10128 10502 0 2 180,172, 0,202, +,+, 671380 Simple_repeat Simple_repeat 585 chrUn_NT_468846v1 2170 3044 GGXHOI 373 + 2170 3044 0 2 357,459, 0,415, +,+, 671392 Satellite W-chromosome 585 chrUn_NT_468846v1 3215 3805 GGXHOI 445 + 3215 3805 0 2 126,451, 0,139, +,+, 671393 Satellite W-chromosome 585 chrUn_NT_468846v1 3951 6137 GGXHOI 413 + 3951 6137 0 4 266,202,788,822, 0,313,535,1364, +,+,+,+, 671394 Satellite W-chromosome 585 chrUn_NT_468846v1 6368 6938 GGXHOI 311 + 6368 6938 0 3 143,213,160, 0,186,410, +,+,+, 671395 Satellite W-chromosome 585 chrUn_NT_468846v1 8684 10613 GGXHOI 361 + 8684 10613 0 7 133,236,334,128,242,55,636, 0,150,436,788,947,1223,1293, +,+,+,+,+,+,+, 671398 Satellite W-chromosome 585 chrUn_NT_468847v1 1232 2570 GGXHOI 519 - 1232 2570 0 2 373,924, 0,414, -,-, 671400 Satellite W-chromosome 585 chrUn_NT_468847v1 2650 5794 GGXHOI 547 - 2650 5794 0 2 545,2583, 0,561, -,-, 671401 Satellite W-chromosome 585 chrUn_NT_468847v1 5859 8776 GGXHOI 530 - 5859 8776 0 4 696,731,149,1014, 0,951,1693,1903, -,-,-,-, 671402 Satellite W-chromosome 585 chrUn_NT_468849v1 440 846 (CCTTG)n 404 + 440 846 0 2 182,175, 0,231, +,+, 671420 Simple_repeat Simple_repeat 585 chrUn_NT_468849v1 991 1545 (CCTCG)n 528 + 991 1545 0 2 360,179, 0,375, +,+, 671422 Simple_repeat Simple_repeat 585 chrUn_NT_468849v1 2335 3254 (CCTCG)n 531 + 2335 3254 0 3 177,316,226, 0,198,693, +,+,+, 671425 Simple_repeat Simple_repeat 585 chrUn_NT_468849v1 3133 3476 (CCCCG)n 509 + 3133 3476 0 2 153,178, 0,165, +,+, 671427 Simple_repeat Simple_repeat 585 chrUn_NT_468849v1 3817 6041 GGLTR10D-int 842 + 3817 6041 0 2 1858,363, 0,1861, +,+, 671431 LTR ERVK 585 chrUn_NT_468849v1 6217 8672 GGLTR7-int 586 - 6217 8672 0 2 794,339, 0,2116, -,-, 671432 LTR ERV1 585 chrUn_NT_468850v1 3000 4781 CR1-F 766 + 3000 4781 0 2 46,1656, 0,125, +,+, 671439 LINE CR1 585 chrUn_NT_468850v1 6640 7536 GGLTR7A 532 - 6640 7536 0 4 90,237,108,341, 0,90,373,555, -,-,-,-, 671441 LTR ERV1 585 chrUn_NT_468850v1 7530 10780 GGLTR7A 785 - 7530 10780 0 2 243,3007, 0,243, -,-, 671442 LTR ERV1 585 chrUn_NT_468853v1 2172 2794 CR1-H 387 + 2172 2794 0 2 208,378, 0,244, +,+, 671470 LINE CR1 585 chrUn_NT_468853v1 4673 5297 CR1-H 378 + 4673 5297 0 2 209,379, 0,245, +,+, 671473 LINE CR1 585 chrUn_NT_468853v1 7177 7800 CR1-H 372 + 7177 7800 0 2 208,379, 0,244, +,+, 671476 LINE CR1 585 chrUn_NT_468853v1 9678 10301 CR1-H 369 + 9678 10301 0 2 209,378, 0,245, +,+, 671479 LINE CR1 585 chrUn_NT_468854v1 5047 5500 (TTCGG)n 557 + 5047 5500 0 2 183,258, 0,195, +,+, 671486 Simple_repeat Simple_repeat 585 chrUn_NT_468854v1 7838 8153 (GCCCCACAGCT)n 299 - 7838 8153 0 2 140,132, 0,183, -,-, 671495 Satellite Satellite 585 chrUn_NT_468856v1 1442 1879 (CTCTATGGGG)n 652 - 1442 1879 0 3 151,129,34, 0,151,403, -,-,-, 671509 Satellite Satellite 585 chrUn_NT_468856v1 2451 2724 (ACCCCATAGGG)n 546 - 2451 2724 0 2 124,32, 0,241, -,-, 671514 Satellite Satellite 585 chrUn_NT_468856v1 3532 3788 (CTCTATGGGG)n 733 + 3532 3788 0 2 121,124, 0,132, +,+, 671521 Satellite Satellite 585 chrUn_NT_468856v1 3872 4133 (ACCCATAGAG)n 624 + 3872 4133 0 2 98,20, 0,241, +,+, 671522 Satellite Satellite 585 chrUn_NT_468856v1 3970 4332 (ACCCCATAGGG)n 611 - 3970 4332 0 3 143,42,53, 0,143,309, -,-,-, 671523 Satellite Satellite 585 chrUn_NT_468856v1 4603 4854 (ACCCCATAGGG)n 534 - 4603 4854 0 2 84,43, 0,208, -,-, 671527 Satellite Satellite 585 chrUn_NT_468856v1 4915 5250 (CTCTATGGGG)n 742 - 4915 5250 0 2 147,188, 0,147, -,-, 671529 Satellite Satellite 585 chrUn_NT_468856v1 6023 6279 (CTCTATGGGG)n 733 + 6023 6279 0 2 121,124, 0,132, +,+, 671533 Satellite Satellite 585 chrUn_NT_468856v1 8178 8822 (ACCCATAGGG)n 779 - 8178 8822 0 4 109,13,232,118, 0,224,243,526, -,-,-,-, 671544 Satellite Satellite 585 chrUn_NT_468856v1 8941 9388 (ACCCATAGGG)n 726 - 8941 9388 0 2 231,167, 0,280, -,-, 671547 Satellite Satellite 585 chrUn_NT_468856v1 9523 10184 (ACCCATAGGG)n 725 - 9523 10184 0 3 222,120,237, 0,261,424, -,-,-, 671549 Satellite Satellite 585 chrUn_NT_468857v1 7834 8624 GGXHOI 335 - 7834 8624 0 3 186,174,381, 0,220,409, -,-,-, 671558 Satellite W-chromosome 585 chrUn_NT_468857v1 8816 10770 GGXHOI 376 - 8816 10770 0 4 93,371,992,407, 0,108,520,1547, -,-,-,-, 671560 Satellite W-chromosome 585 chrUn_NT_468858v1 2505 4601 GGXHOI 358 + 2505 4601 0 3 728,278,1005, 0,750,1091, +,+,+, 671564 Satellite W-chromosome 585 chrUn_NT_468858v1 7076 8703 GGXHOI 377 + 7076 8703 0 2 1046,518, 0,1109, +,+, 671569 Satellite W-chromosome 585 chrUn_NT_468858v1 9375 10746 GGXHOI 383 + 9375 10746 0 2 917,392, 0,979, +,+, 671571 Satellite W-chromosome 585 chrUn_NT_468860v1 5625 9527 GGXHOI 355 - 5625 9527 0 4 133,2330,948,394, 0,192,2538,3508, -,-,-,-, 671584 Satellite W-chromosome 585 chrUn_NT_468861v1 5817 8018 GGXHOI 389 + 5817 8018 0 3 472,1087,516, 0,535,1685, +,+,+, 671596 Satellite W-chromosome 585 chrUn_NT_468862v1 4520 4977 CR1-H 677 + 4520 4977 0 2 296,161, 0,296, +,+, 671606 LINE CR1 585 chrUn_NT_468862v1 8034 8657 CR1-H 683 + 8034 8657 0 2 478,139, 0,484, +,+, 671610 LINE CR1 585 chrUn_NT_468863v1 5660 6305 CR1-H 609 - 5660 6305 0 2 142,487, 0,158, -,-, 671616 LINE CR1 585 chrUn_NT_468863v1 8283 9527 CR1-H 534 - 8283 9527 0 2 111,1133, 0,111, -,-, 671619 LINE CR1 585 chrUn_NT_468864v1 650 3536 GGXHOI 373 + 650 3536 0 12 245,365,217,428,135,145,103,143,407,136,130,127, 0,259,666,898,1379,1559,1720,1840,1997,2417,2615,2759, +,+,+,+,+,+,+,+,+,+,+,+, 671621 Satellite W-chromosome 585 chrUn_NT_468864v1 3708 3963 GGXHOI 340 + 3708 3963 0 2 113,128, 0,127, +,+, 671622 Satellite W-chromosome 585 chrUn_NT_468864v1 4568 5274 GGXHOI 413 + 4568 5274 0 3 49,123,487, 0,62,219, +,+,+, 671625 Satellite W-chromosome 585 chrUn_NT_468864v1 5467 6933 GGXHOI 397 + 5467 6933 0 5 241,243,533,184,104, 0,259,546,1138,1362, +,+,+,+,+, 671626 Satellite W-chromosome 585 chrUn_NT_468864v1 7001 8476 GGXHOI 353 + 7001 8476 0 3 180,491,728, 0,193,747, +,+,+, 671627 Satellite W-chromosome 585 chrUn_NT_468864v1 8543 10142 GGXHOI 372 + 8543 10142 0 4 216,196,440,676, 0,227,442,923, +,+,+,+, 671628 Satellite W-chromosome 585 chrUn_NT_468865v1 8554 9553 CR1-B2 706 - 8554 9553 0 2 773,223, 0,776, -,-, 671637 LINE CR1 585 chrUn_NT_468867v1 1355 2408 GGXHOI 447 + 1355 2408 0 3 214,96,493, 0,426,560, +,+,+, 671651 Satellite W-chromosome 585 chrUn_NT_468867v1 2515 3186 GGXHOI 437 + 2515 3186 0 2 368,270, 0,401, +,+, 671654 Satellite W-chromosome 585 chrUn_NT_468867v1 3806 4316 GGXHOI 494 + 3806 4316 0 2 225,18, 0,492, +,+, 671655 Satellite W-chromosome 585 chrUn_NT_468867v1 4391 6698 GGXHOI 565 + 4391 6698 0 6 194,74,194,297,194,17, 0,235,563,1080,1774,2290, +,+,+,+,+,+, 671657 Satellite W-chromosome 585 chrUn_NT_468867v1 6767 7623 GGXHOI 545 + 6767 7623 0 3 276,18,232, 0,594,624, +,+,+, 671662 Satellite W-chromosome 585 chrUn_NT_468867v1 7943 8797 GGXHOI 534 + 7943 8797 0 2 606,237, 0,617, +,+, 671666 Satellite W-chromosome 585 chrUn_NT_468867v1 9690 10729 GGXHOI 530 + 9690 10729 0 2 118,595, 0,444, +,+, 671671 Satellite W-chromosome 585 chrUn_NT_468868v1 4729 6701 GGXHOI 347 - 4729 6701 0 2 823,1095, 0,877, -,-, 671676 Satellite W-chromosome 585 chrUn_NT_468869v1 610 5140 GGXHOI 325 - 610 5140 0 7 1030,143,898,628,651,471,540, 0,1091,1258,2173,2835,3502,3990, -,-,-,-,-,-,-, 671684 Satellite W-chromosome 585 chrUn_NT_468869v1 5615 9333 GGXHOI 351 - 5615 9333 0 3 1918,1300,421, 0,1981,3297, -,-,-, 671686 Satellite W-chromosome 585 chrUn_NT_468870v1 1696 4302 GGERVL-B-int 708 - 1696 4302 0 4 796,1074,64,309, 0,796,1871,2297, -,-,-,-, 671689 LTR ERVL 585 chrUn_NT_468870v1 6645 7320 GGLTR7A 738 - 6645 7320 0 2 584,83, 0,592, -,-, 671693 LTR ERV1 585 chrUn_NT_468870v1 7318 10742 GGLTR7A 770 + 7318 10742 0 2 2844,579, 0,2845, +,+, 671694 LTR ERV1 585 chrUn_NT_468871v1 6963 8436 GGXHOI 404 + 6963 8436 0 5 131,347,276,238,353, 0,180,544,865,1120, +,+,+,+,+, 671706 Satellite W-chromosome 585 chrUn_NT_468871v1 8631 10716 GGXHOI 404 + 8631 10716 0 4 1010,228,396,354, 0,1061,1320,1731, +,+,+,+, 671707 Satellite W-chromosome 585 chrUn_NT_468872v1 7949 9552 GGERVL-A-int 566 - 7949 9552 0 3 1234,79,204, 0,1234,1399, -,-,-, 671715 LTR ERVL 585 chrUn_NT_468873v1 1560 3102 GGXHOI 387 + 1560 3102 0 2 472,1009, 0,533, +,+, 671719 Satellite W-chromosome 585 chrUn_NT_468873v1 5284 6477 GGXHOI 348 + 5284 6477 0 2 967,169, 0,1024, +,+, 671723 Satellite W-chromosome 585 chrUn_NT_468873v1 6682 7142 GGXHOI 356 + 6682 7142 0 2 270,162, 0,298, +,+, 671724 Satellite W-chromosome 585 chrUn_NT_468874v1 1967 3086 CR1-B2 674 - 1967 3086 0 2 890,229, 0,890, -,-, 671731 LINE CR1 585 chrUn_NT_468875v1 330 9844 GGXHOI 420 - 330 9844 0 6 5585,986,1126,166,1271,252, 0,5615,6620,7765,7963,9262, -,-,-,-,-,-, 671739 Satellite W-chromosome 585 chrUn_NT_468876v1 4995 5375 (CGAGG)n 513 + 4995 5375 0 2 180,179, 0,201, +,+, 671762 Simple_repeat Simple_repeat 585 chrUn_NT_468876v1 5383 5844 (AGGCG)n 370 + 5383 5844 0 2 15,401, 0,60, +,+, 671763 Simple_repeat Simple_repeat 585 chrUn_NT_468876v1 5850 7127 (CGAGG)n 523 + 5850 7127 0 3 496,564,181, 0,519,1096, +,+,+, 671765 Simple_repeat Simple_repeat 585 chrUn_NT_468876v1 8976 9684 (CGAGG)n 468 + 8976 9684 0 2 518,177, 0,531, +,+, 671771 Simple_repeat Simple_repeat 585 chrUn_NT_468877v1 1891 2006 GA-rich 304 + 1891 2006 0 2 22,52, 0,63, +,+, 671788 Low_complexity Low_complexity 585 chrUn_NT_468878v1 1751 5446 GGXHOI 415 - 1751 5446 0 10 422,671,131,181,137,1011,127,310,280,147, 0,465,1153,1297,1490,1643,2672,2840,3207,3548, -,-,-,-,-,-,-,-,-,-, 671803 Satellite W-chromosome 585 chrUn_NT_468878v1 5520 7139 GGXHOI 372 - 5520 7139 0 3 1097,340,135, 0,1127,1484, -,-,-, 671804 Satellite W-chromosome 585 chrUn_NT_468878v1 7209 8453 GGXHOI 439 - 7209 8453 0 3 696,147,345, 0,713,899, -,-,-, 671805 Satellite W-chromosome 585 chrUn_NT_468878v1 8537 9366 GGXHOI 369 - 8537 9366 0 4 141,302,192,127, 0,153,480,702, -,-,-,-, 671806 Satellite W-chromosome 585 chrUn_NT_468878v1 9469 10718 GGXHOI 304 - 9469 10718 0 3 151,331,723, 0,167,526, -,-,-, 671807 Satellite W-chromosome 585 chrUn_NT_468880v1 3915 5227 CR1-X 489 + 3915 5227 0 4 57,98,131,221, 0,820,918,1091, +,+,+,+, 671814 LINE CR1 585 chrUn_NT_468882v1 2147 3159 GGXHOI 430 - 2147 3159 0 2 143,824, 0,188, -,-, 671825 Satellite W-chromosome 585 chrUn_NT_468882v1 6362 7580 GGXHOI 448 - 6362 7580 0 4 483,290,161,193, 0,511,837,1025, -,-,-,-, 671831 Satellite W-chromosome 585 chrUn_NT_468882v1 7645 9069 GGXHOI 367 - 7645 9069 0 2 822,567, 0,857, -,-, 671832 Satellite W-chromosome 585 chrUn_NT_468883v1 368 1442 GGXHOI 511 - 368 1442 0 2 859,202, 0,872, -,-, 671836 Satellite W-chromosome 585 chrUn_NT_468883v1 1512 2113 GGXHOI 570 - 1512 2113 0 2 22,279, 0,322, -,-, 671837 Satellite W-chromosome 585 chrUn_NT_468883v1 2124 6174 GGXHOI 510 - 2124 6174 0 8 597,32,57,767,179,335,355,283, 0,875,922,996,2057,2599,3213,3767, -,-,-,-,-,-,-,-, 671840 Satellite W-chromosome 585 chrUn_NT_468883v1 6244 7345 GGXHOI 537 - 6244 7345 0 2 402,681, 0,420, -,-, 671846 Satellite W-chromosome 585 chrUn_NT_468883v1 7755 8490 GGXHOI 510 - 7755 8490 0 2 96,595, 0,140, -,-, 671848 Satellite W-chromosome 585 chrUn_NT_468883v1 8585 10587 GGXHOI 508 - 8585 10587 0 4 408,285,314,201, 0,635,1237,1801, -,-,-,-, 671849 Satellite W-chromosome 585 chrUn_NT_468884v1 1284 4105 GGLTR3F2 806 + 1284 4105 0 2 2342,479, 0,2342, +,+, 671856 LTR ERVL 585 chrUn_NT_468884v1 4106 4943 (CGGAG)n 339 + 4106 4943 0 3 355,198,204, 0,408,633, +,+,+, 671857 Simple_repeat Simple_repeat 585 chrUn_NT_468884v1 5019 5478 (CGGAG)n 260 + 5019 5478 0 2 209,194, 0,265, +,+, 671858 Simple_repeat Simple_repeat 585 chrUn_NT_468884v1 5584 7246 (CGGAG)n 302 + 5584 7246 0 5 565,191,309,117,192, 0,611,828,1158,1470, +,+,+,+,+, 671860 Simple_repeat Simple_repeat 585 chrUn_NT_468884v1 7270 8176 (CGGAG)n 285 + 7270 8176 0 4 191,197,198,266, 0,207,416,640, +,+,+,+, 671863 Simple_repeat Simple_repeat 585 chrUn_NT_468885v1 2340 4343 GGLTR7-int 653 - 2340 4343 0 3 35,50,1289, 0,35,714, -,-,-, 671878 LTR ERV1 585 chrUn_NT_468886v1 3924 5049 CR1-B2 698 + 3924 5049 0 2 225,897, 0,228, +,+, 671881 LINE CR1 585 chrUn_NT_468888v1 8733 9542 GGXHOI 544 - 8733 9542 0 2 154,613, 0,196, -,-, 671909 Satellite W-chromosome 585 chrUn_NT_468890v1 6793 7633 Z-REP 520 - 6793 7633 0 2 315,441, 0,399, -,-, 671927 Satellite macro 585 chrUn_NT_468891v1 2012 3693 GGXHOI 367 - 2012 3693 0 3 201,728,642, 0,264,1039, -,-,-, 671933 Satellite W-chromosome 585 chrUn_NT_468891v1 4275 6178 GGXHOI 401 - 4275 6178 0 3 1218,412,215, 0,1234,1688, -,-,-, 671936 Satellite W-chromosome 585 chrUn_NT_468891v1 6755 8638 GGXHOI 367 - 6755 8638 0 4 468,393,728,216, 0,485,898,1667, -,-,-,-, 671939 Satellite W-chromosome 585 chrUn_NT_468892v1 534 957 GGXHOI 349 - 534 957 0 2 278,130, 0,293, -,-, 671943 Satellite W-chromosome 585 chrUn_NT_468892v1 1309 1688 GGXHOI 350 - 1309 1688 0 2 120,205, 0,174, -,-, 671944 Satellite W-chromosome 585 chrUn_NT_468892v1 1763 7126 GGXHOI 407 - 1763 7126 0 12 185,58,130,727,760,329,780,203,272,165,209,1245, 0,198,300,484,1228,2006,2347,3167,3422,3709,3892,4118, -,-,-,-,-,-,-,-,-,-,-,-, 671945 Satellite W-chromosome 585 chrUn_NT_468892v1 7365 9679 GGXHOI 368 - 7365 9679 0 5 261,768,522,402,235, 0,305,1084,1648,2079, -,-,-,-,-, 671946 Satellite W-chromosome 585 chrUn_NT_468892v1 9827 10724 GGXHOI 435 - 9827 10724 0 2 698,181, 0,716, -,-, 671947 Satellite W-chromosome 585 chrUn_NT_468893v1 5624 6015 (CTCTATGGGG)n 387 + 5624 6015 0 2 115,246, 0,145, +,+, 671950 Satellite Satellite 585 chrUn_NT_468893v1 8915 9325 (CTCTATGGGG)n 559 + 8915 9325 0 2 239,118, 0,292, +,+, 671957 Satellite Satellite 585 chrUn_NT_468894v1 3148 4415 GGXHOI 538 - 3148 4415 0 2 241,831, 0,436, -,-, 671965 Satellite W-chromosome 585 chrUn_NT_468894v1 4168 5035 Sat-CR1_GG 186 - 4168 5035 0 2 275,433, 0,434, -,-, 671967 Satellite Satellite 585 chrUn_NT_468894v1 4645 10680 GGXHOI 536 - 4645 10680 0 6 454,684,286,385,365,2256, 0,508,1215,2086,3053,3779, -,-,-,-,-,-, 671969 Satellite W-chromosome 585 chrUn_NT_468896v1 3176 3414 CR1-D2 434 - 3176 3414 0 3 76,85,51, 0,102,187, -,-,-, 672008 LINE CR1 585 chrUn_NT_468896v1 3940 4037 CR1-C4 569 - 3940 4037 0 2 46,51, 0,46, -,-, 672012 LINE CR1 585 chrUn_NT_468896v1 4137 5046 CR1-E 605 - 4137 5046 0 2 60,60, 0,849, -,-, 672013 LINE CR1 585 chrUn_NT_468896v1 5428 5635 CR1-C4 507 - 5428 5635 0 2 61,51, 0,156, -,-, 672027 LINE CR1 585 chrUn_NT_468897v1 256 2713 GGXHOI 423 + 256 2713 0 4 717,1068,146,487, 0,732,1811,1970, +,+,+,+, 672037 Satellite W-chromosome 585 chrUn_NT_468897v1 2798 3791 GGXHOI 425 + 2798 3791 0 3 338,146,486, 0,349,507, +,+,+, 672038 Satellite W-chromosome 585 chrUn_NT_468897v1 3876 5953 GGXHOI 420 + 3876 5953 0 4 338,146,907,647, 0,349,508,1430, +,+,+,+, 672039 Satellite W-chromosome 585 chrUn_NT_468897v1 6038 9702 GGXHOI 422 + 6038 9702 0 4 338,146,2497,644, 0,349,508,3020, +,+,+,+, 672040 Satellite W-chromosome 585 chrUn_NT_468898v1 3754 5135 GGLTR7-int 317 - 3754 5135 0 3 279,231,101, 0,1047,1280, -,-,-, 672045 LTR ERV1 585 chrUn_NT_468900v1 500 2610 GGXHOI 374 - 500 2610 0 2 1007,1040, 0,1070, -,-, 672069 Satellite W-chromosome 585 chrUn_NT_468900v1 2790 4292 GGXHOI 372 - 2790 4292 0 2 1009,430, 0,1072, -,-, 672070 Satellite W-chromosome 585 chrUn_NT_468900v1 5541 6590 GGXHOI 377 - 5541 6590 0 2 514,472, 0,577, -,-, 672073 Satellite W-chromosome 585 chrUn_NT_468900v1 6689 7686 GGXHOI 377 - 6689 7686 0 2 516,418, 0,579, -,-, 672074 Satellite W-chromosome 585 chrUn_NT_468901v1 2624 2995 (ACCCCATAGGG)n 474 - 2624 2995 0 2 193,71, 0,300, -,-, 672080 Satellite Satellite 585 chrUn_NT_468901v1 4867 5479 (ACCCCATAGGG)n 603 - 4867 5479 0 2 273,310, 0,302, -,-, 672085 Satellite Satellite 585 chrUn_NT_468903v1 3595 9656 GGXHOI 557 - 3595 9656 0 6 848,2352,552,245,1767,152, 0,901,3266,3861,4129,5909, -,-,-,-,-,-, 672094 Satellite W-chromosome 585 chrUn_NT_468904v1 784 6998 GGLTR3A 682 - 784 6998 0 4 333,3501,1819,561, 0,333,3834,5653, -,-,-,-, 672099 LTR ERVL 585 chrUn_NT_468904v1 6998 10705 GGERVL-B-int 769 + 6998 10705 0 2 3490,217, 0,3490, +,+, 672100 LTR ERVL 585 chrUn_NT_468905v1 2288 3172 CR1-B2 650 + 2288 3172 0 3 53,60,60, 0,679,824, +,+,+, 672105 LINE CR1 585 chrUn_NT_468905v1 2338 2442 CR1-E 647 + 2338 2442 0 2 53,51, 0,53, +,+, 672106 LINE CR1 585 chrUn_NT_468905v1 2489 2738 CR1-B2 641 + 2489 2738 0 3 53,54,61, 0,95,188, +,+,+, 672108 LINE CR1 585 chrUn_NT_468905v1 3618 4013 CR1-Y4 388 - 3618 4013 0 2 80,315, 0,80, -,-, 672114 LINE CR1 585 chrUn_NT_468905v1 4989 5397 CR1-Y2 520 - 4989 5397 0 2 162,246, 0,162, -,-, 672127 LINE CR1 585 chrUn_NT_468905v1 5695 7987 CR1-Y2 289 - 5695 7987 0 2 240,84, 0,2208, -,-, 672132 LINE CR1 585 chrUn_NT_468905v1 6420 7441 CR1-E 633 + 6420 7441 0 2 53,59, 0,962, +,+, 672134 LINE CR1 585 chrUn_NT_468905v1 6832 6933 CR1-E 600 + 6832 6933 0 2 53,48, 0,53, +,+, 672135 LINE CR1 585 chrUn_NT_468906v1 532 2746 (CAAGG)n 592 + 532 2746 0 9 213,183,129,132,135,158,100,196,183, 0,233,436,747,1067,1381,1539,1824,2031, +,+,+,+,+,+,+,+,+, 672140 Simple_repeat Simple_repeat 585 chrUn_NT_468906v1 2762 4227 GGXHOI 387 + 2762 4227 0 2 604,808, 0,657, +,+, 672145 Satellite W-chromosome 585 chrUn_NT_468906v1 4239 5227 (CCTCG)n 628 + 4239 5227 0 3 72,53,665, 0,253,323, +,+,+, 672146 Simple_repeat Simple_repeat 585 chrUn_NT_468906v1 6030 7503 GGXHOI 393 + 6030 7503 0 3 484,366,560, 0,527,913, +,+,+, 672150 Satellite W-chromosome 585 chrUn_NT_468906v1 7777 8665 GGXHOI 384 + 7777 8665 0 2 190,683, 0,205, +,+, 672151 Satellite W-chromosome 585 chrUn_NT_468907v1 1429 3278 CR1-F 514 + 1429 3278 0 6 203,203,204,155,197,204, 0,245,490,959,1403,1645, +,+,+,+,+,+, 672162 LINE CR1 585 chrUn_NT_468907v1 3321 5170 CR1-F 500 + 3321 5170 0 6 202,203,204,155,194,207, 0,244,489,959,1403,1642, +,+,+,+,+,+, 672165 LINE CR1 585 chrUn_NT_468907v1 5213 7073 CR1-F 525 + 5213 7073 0 6 203,204,204,155,201,210, 0,245,491,961,1406,1650, +,+,+,+,+,+, 672168 LINE CR1 585 chrUn_NT_468907v1 7116 8972 CR1-F 514 + 7116 8972 0 6 203,203,204,155,202,204, 0,246,491,961,1406,1652, +,+,+,+,+,+, 672171 LINE CR1 585 chrUn_NT_468907v1 9015 10674 CR1-F 548 + 9015 10674 0 6 202,203,204,175,202,211, 0,244,488,734,1200,1448, +,+,+,+,+,+, 672174 LINE CR1 585 chrUn_NT_468908v1 5964 9689 GGLTR7-int 658 - 5964 9689 0 3 466,1434,1824, 0,467,1901, -,-,-, 672179 LTR ERV1 585 chrUn_NT_468910v1 6225 6969 (TGGA)n 624 + 6225 6969 0 2 232,34, 0,710, +,+, 672192 Simple_repeat Simple_repeat 585 chrUn_NT_468910v1 7849 8241 (CGGA)n 374 + 7849 8241 0 2 188,62, 0,330, +,+, 672200 Simple_repeat Simple_repeat 585 chrUn_NT_468911v1 676 1152 (ACCCATAGAG)n 723 - 676 1152 0 2 121,355, 0,121, -,-, 672210 Satellite Satellite 585 chrUn_NT_468911v1 3496 3889 (ACCCATAGAG)n 741 - 3496 3889 0 2 120,273, 0,120, -,-, 672218 Satellite Satellite 585 chrUn_NT_468911v1 4181 4848 (CTCTATGGGG)n 742 + 4181 4848 0 2 177,165, 0,502, +,+, 672220 Satellite Satellite 585 chrUn_NT_468911v1 5180 5858 (CTCTATGGGG)n 697 + 5180 5858 0 2 118,547, 0,131, +,+, 672226 Satellite Satellite 585 chrUn_NT_468911v1 5435 5908 (ACCCATAGAG)n 658 - 5435 5908 0 2 260,91, 0,382, -,-, 672227 Satellite Satellite 585 chrUn_NT_468911v1 5829 6320 (CTCTATGGGG)n 598 - 5829 6320 0 2 91,254, 0,237, -,-, 672229 Satellite Satellite 585 chrUn_NT_468911v1 7644 7912 (CTCTATGGGG)n 688 - 7644 7912 0 2 137,131, 0,137, -,-, 672233 Satellite Satellite 585 chrUn_NT_468911v1 8852 9987 (CTCTATGGGG)n 655 + 8852 9987 0 5 234,119,123,157,133, 0,293,425,579,1002, +,+,+,+,+, 672239 Satellite Satellite 585 chrUn_NT_468911v1 10040 10336 (CTCTATGGGG)n 571 + 10040 10336 0 2 122,127, 0,169, +,+, 672243 Satellite Satellite 585 chrUn_NT_468911v1 10308 10685 (ACCCCATAGGG)n 406 - 10308 10685 0 2 52,105, 0,272, -,-, 672244 Satellite Satellite 585 chrUn_NT_468912v1 394 1357 GGXHOI 385 - 394 1357 0 3 424,130,347, 0,438,616, -,-,-, 672247 Satellite W-chromosome 585 chrUn_NT_468912v1 1732 2402 GGXHOI 382 - 1732 2402 0 2 357,296, 0,374, -,-, 672248 Satellite W-chromosome 585 chrUn_NT_468912v1 2539 3360 GGXHOI 293 - 2539 3360 0 2 130,675, 0,146, -,-, 672249 Satellite W-chromosome 585 chrUn_NT_468912v1 3551 5400 GGXHOI 372 - 3551 5400 0 5 124,374,456,189,580, 0,164,551,1062,1269, -,-,-,-,-, 672250 Satellite W-chromosome 585 chrUn_NT_468912v1 5599 9363 GGXHOI 359 - 5599 9363 0 8 217,496,582,246,1010,405,259,384, 0,233,742,1357,1648,2687,3104,3380, -,-,-,-,-,-,-,-, 672251 Satellite W-chromosome 585 chrUn_NT_468912v1 9534 10148 GGXHOI 316 - 9534 10148 0 4 130,162,123,151, 0,148,325,463, -,-,-,-, 672252 Satellite W-chromosome 585 chrUn_NT_468913v1 1003 9504 GGXHOI 546 + 1003 9504 0 6 1552,1502,1373,1148,1781,35, 0,1752,3465,5113,6462,8466, +,+,+,+,+,+, 672256 Satellite W-chromosome 585 chrUn_NT_468914v1 3096 4493 GGLTR7-int 339 + 3096 4493 0 3 101,236,289, 0,127,1108, +,+,+, 672266 LTR ERV1 585 chrUn_NT_468915v1 2164 10668 GGXHOI 379 - 2164 10668 0 6 937,608,1226,5105,91,443, 0,955,1584,2825,7948,8061, -,-,-,-,-,-, 672274 Satellite W-chromosome 585 chrUn_NT_468916v1 689 1320 CR1-H 628 + 689 1320 0 2 482,142, 0,489, +,+, 672276 LINE CR1 585 chrUn_NT_468917v1 4348 6266 GGLTR7-int 641 - 4348 6266 0 4 33,74,656,523, 0,34,739,1395, -,-,-,-, 672291 LTR ERV1 585 chrUn_NT_468919v1 735 1741 GGXHOI 369 - 735 1741 0 2 475,468, 0,538, -,-, 672322 Satellite W-chromosome 585 chrUn_NT_468919v1 2441 4025 GGXHOI 374 - 2441 4025 0 2 1047,474, 0,1110, -,-, 672324 Satellite W-chromosome 585 chrUn_NT_468919v1 7698 8295 GGXHOI 344 - 7698 8295 0 2 134,437, 0,160, -,-, 672330 Satellite W-chromosome 585 chrUn_NT_468920v1 4569 10635 GGXHOI 561 - 4569 10635 0 9 74,517,115,14,1570,639,852,167,14, 0,453,1171,1516,1544,3409,4417,5648,6052, -,-,-,-,-,-,-,-,-, 672341 Satellite W-chromosome 585 chrUn_NT_468921v1 7279 7750 CR1-F2 337 - 7279 7750 0 3 94,83,139, 0,94,332, -,-,-, 672359 LINE CR1 585 chrUn_NT_468921v1 8920 9138 CR1-C4 639 - 8920 9138 0 2 47,128, 0,90, -,-, 672364 LINE CR1 585 chrUn_NT_468923v1 1651 1959 GGXHOI 348 - 1651 1959 0 2 159,132, 0,176, -,-, 672376 Satellite W-chromosome 585 chrUn_NT_468923v1 2044 2690 GGXHOI 343 - 2044 2690 0 2 153,440, 0,206, -,-, 672377 Satellite W-chromosome 585 chrUn_NT_468925v1 3916 5069 CR1-B2 647 + 3916 5069 0 6 48,56,39,58,54,54, 0,351,407,569,921,1099, +,+,+,+,+,+, 672395 LINE CR1 585 chrUn_NT_468925v1 4042 4231 CR1-B2 612 + 4042 4231 0 2 54,53, 0,136, +,+, 672398 LINE CR1 585 chrUn_NT_468927v1 631 2256 GGXHOI 391 + 631 2256 0 2 1046,516, 0,1109, +,+, 672427 Satellite W-chromosome 585 chrUn_NT_468927v1 2355 3103 GGXHOI 382 + 2355 3103 0 2 472,213, 0,535, +,+, 672428 Satellite W-chromosome 585 chrUn_NT_468927v1 9191 10563 GGXHOI 378 + 9191 10563 0 2 472,837, 0,535, +,+, 672435 Satellite W-chromosome 585 chrUn_NT_468928v1 2825 3614 GGERVL-A-int 208 + 2825 3614 0 2 276,242, 0,547, +,+, 672441 LTR ERVL 585 chrUn_NT_468928v1 3817 4667 CR1-D2 694 + 3817 4667 0 2 770,34, 0,816, +,+, 672443 LINE CR1 585 chrUn_NT_468928v1 9061 10319 CR1-D2 689 - 9061 10319 0 2 439,431, 0,827, -,-, 672446 LINE CR1 585 chrUn_NT_468931v1 5606 6155 CR1-X 375 + 5606 6155 0 3 168,130,251, 0,168,298, +,+,+, 672508 LINE CR1 585 chrUn_NT_468932v1 696 2910 GGLTR10D-int 917 - 696 2910 0 2 365,1846, 0,368, -,-, 672514 LTR ERVK 585 chrUn_NT_468932v1 3570 4556 (CGAGG)n 551 + 3570 4556 0 4 369,177,112,74, 0,420,622,912, +,+,+,+, 672518 Simple_repeat Simple_repeat 585 chrUn_NT_468932v1 5110 5449 (CGAGG)n 539 + 5110 5449 0 2 148,178, 0,161, +,+, 672522 Simple_repeat Simple_repeat 585 chrUn_NT_468932v1 6729 8052 (CGAGG)n 530 + 6729 8052 0 3 119,823,29, 0,298,1294, +,+,+, 672526 Simple_repeat Simple_repeat 585 chrUn_NT_468932v1 8658 10019 (CGAGG)n 554 + 8658 10019 0 4 178,176,173,771, 0,198,402,590, +,+,+,+, 672534 Simple_repeat Simple_repeat 585 chrUn_NT_468932v1 10214 10628 (CGAGG)n 501 + 10214 10628 0 2 178,185, 0,229, +,+, 672536 Simple_repeat Simple_repeat 585 chrUn_NT_468935v1 5176 6543 CR1-F 479 - 5176 6543 0 5 204,149,198,207,206, 0,255,670,910,1161, -,-,-,-,-, 672590 LINE CR1 585 chrUn_NT_468935v1 7020 10456 CR1-F 533 - 7020 10456 0 10 192,200,156,206,203,204,203,194,207,180, 0,237,730,1154,1402,1647,2156,2638,2879,3256, -,-,-,-,-,-,-,-,-,-, 672594 LINE CR1 585 chrUn_NT_468936v1 4195 5018 GGXHOI 370 - 4195 5018 0 3 140,213,384, 0,164,439, -,-,-, 672605 Satellite W-chromosome 585 chrUn_NT_468936v1 9151 10371 GGXHOI 349 - 9151 10371 0 2 998,165, 0,1055, -,-, 672612 Satellite W-chromosome 585 chrUn_NT_468937v1 3108 3400 CR1-Y4 595 + 3108 3400 0 2 18,60, 0,232, +,+, 672621 LINE CR1 585 chrUn_NT_468937v1 9907 10283 (ACCCATAGGG)n 277 + 9907 10283 0 2 225,108, 0,268, +,+, 672627 Satellite Satellite 585 chrUn_NT_468938v1 3613 4474 GGXHOI 372 - 3613 4474 0 2 188,630, 0,231, -,-, 672633 Satellite W-chromosome 585 chrUn_NT_468938v1 4663 6161 GGXHOI 356 - 4663 6161 0 2 1332,150, 0,1348, -,-, 672634 Satellite W-chromosome 585 chrUn_NT_468938v1 9218 9860 GGXHOI 349 - 9218 9860 0 2 296,329, 0,313, -,-, 672637 Satellite W-chromosome 585 chrUn_NT_468939v1 77 9051 GGXHOI 576 - 77 9051 0 2 592,2813, 0,6161, -,-, 672641 Satellite W-chromosome 585 chrUn_NT_468940v1 233 615 (CAAGG)n 622 + 233 615 0 2 172,210, 0,172, +,+, 672646 Simple_repeat Simple_repeat 585 chrUn_NT_468940v1 766 1316 (CAAGG)n 620 + 766 1316 0 2 250,260, 0,290, +,+, 672648 Simple_repeat Simple_repeat 585 chrUn_NT_468940v1 1384 2277 CR1-F2 877 + 1384 2277 0 2 117,776, 0,117, +,+, 672650 LINE CR1 585 chrUn_NT_468940v1 7254 7954 G-rich 326 + 7254 7954 0 2 85,574, 0,126, +,+, 672656 Low_complexity Low_complexity 585 chrUn_NT_468941v1 2202 2538 (GCCCCACAGCT)n 608 + 2202 2538 0 2 88,22, 0,314, +,+, 672661 Satellite Satellite 585 chrUn_NT_468942v1 485 2108 GGXHOI 391 + 485 2108 0 2 1046,514, 0,1109, +,+, 672679 Satellite W-chromosome 585 chrUn_NT_468942v1 2207 4837 GGXHOI 322 + 2207 4837 0 5 472,703,851,129,288, 0,535,1280,2191,2342, +,+,+,+,+, 672680 Satellite W-chromosome 585 chrUn_NT_468943v1 6962 8012 GGXHOI 381 + 6962 8012 0 2 471,517, 0,533, +,+, 672696 Satellite W-chromosome 585 chrUn_NT_468943v1 8110 10181 GGXHOI 389 + 8110 10181 0 3 472,1011,467, 0,535,1604, +,+,+, 672697 Satellite W-chromosome 585 chrUn_NT_468944v1 4435 4608 (ACTCC)n 248 + 4435 4608 0 2 42,76, 0,97, +,+, 672720 Simple_repeat Simple_repeat 585 chrUn_NT_468945v1 9774 9897 (TCCC)n 320 + 9774 9897 0 2 7,13, 0,110, +,+, 672764 Simple_repeat Simple_repeat 585 chrUn_NT_468946v1 951 2000 GGXHOI 377 - 951 2000 0 2 514,472, 0,577, -,-, 672770 Satellite W-chromosome 585 chrUn_NT_468946v1 2099 3720 GGXHOI 387 - 2099 3720 0 2 516,1042, 0,579, -,-, 672771 Satellite W-chromosome 585 chrUn_NT_468946v1 4391 5440 GGXHOI 379 - 4391 5440 0 2 516,471, 0,578, -,-, 672773 Satellite W-chromosome 585 chrUn_NT_468946v1 6115 7724 GGXHOI 373 - 6115 7724 0 2 1078,469, 0,1140, -,-, 672775 Satellite W-chromosome 585 chrUn_NT_468946v1 9812 10563 GGXHOI 306 - 9812 10563 0 2 261,433, 0,318, -,-, 672778 Satellite W-chromosome 585 chrUn_NT_468947v1 2664 3068 (CAGGC)n 460 + 2664 3068 0 2 199,27, 0,377, +,+, 672792 Simple_repeat Simple_repeat 585 chrUn_NT_468947v1 3074 3791 (CAAGG)n 590 + 3074 3791 0 2 201,157, 0,560, +,+, 672794 Simple_repeat Simple_repeat 585 chrUn_NT_468947v1 4975 5294 (TCCT)n 380 + 4975 5294 0 2 73,11, 0,308, +,+, 672798 Simple_repeat Simple_repeat 585 chrUn_NT_468949v1 5132 10618 Z-REP 713 - 5132 10618 0 2 4099,1357, 0,4129, -,-, 672810 Satellite macro 585 chrUn_NT_468950v1 3723 4263 (ACCCCATAGGG)n 345 - 3723 4263 0 2 283,237, 0,303, -,-, 672813 Satellite Satellite 585 chrUn_NT_468951v1 4645 4940 CR1-X2 464 - 4645 4940 0 2 232,63, 0,232, -,-, 672821 LINE CR1 585 chrUn_NT_468951v1 6546 10615 Z-REP 838 + 6546 10615 0 2 3486,519, 0,3550, +,+, 672823 Satellite macro 585 chrUn_NT_468952v1 9865 10420 CR1-X 397 - 9865 10420 0 3 219,121,152, 0,253,403, -,-,-, 672828 LINE CR1 585 chrUn_NT_468954v1 8959 9205 CR1-X 453 - 8959 9205 0 2 76,170, 0,76, -,-, 672844 LINE CR1 585 chrUn_NT_468955v1 3559 4663 GGXHOI 352 - 3559 4663 0 2 464,595, 0,509, -,-, 672849 Satellite W-chromosome 585 chrUn_NT_468955v1 7675 8863 GGXHOI 353 - 7675 8863 0 2 798,364, 0,824, -,-, 672854 Satellite W-chromosome 585 chrUn_NT_468956v1 9659 10271 CR1-H 632 - 9659 10271 0 2 138,468, 0,144, -,-, 672870 LINE CR1 585 chrUn_NT_468958v1 5535 7776 GGXHOI 355 + 5535 7776 0 2 2016,164, 0,2077, +,+, 672885 Satellite W-chromosome 585 chrUn_NT_468958v1 7861 10607 GGXHOI 420 + 7861 10607 0 2 360,2354, 0,392, +,+, 672886 Satellite W-chromosome 585 chrUn_NT_468962v1 3984 5904 GGXHOI 348 - 3984 5904 0 5 1208,135,76,162,246, 0,1250,1400,1499,1674, -,-,-,-,-, 672917 Satellite W-chromosome 585 chrUn_NT_468962v1 8348 10559 GGXHOI 378 - 8348 10559 0 5 149,476,636,458,365, 0,199,693,1344,1846, -,-,-,-,-, 672922 Satellite W-chromosome 585 chrUn_NT_468963v1 7093 7147 (GCAA)n 458 + 7093 7147 0 2 10,12, 0,42, +,+, 672947 Simple_repeat Simple_repeat 585 chrUn_NT_468963v1 8054 8183 GA-rich 376 + 8054 8183 0 2 42,43, 0,86, +,+, 672952 Low_complexity Low_complexity 585 chrUn_NT_468966v1 2758 6362 GGXHOI 539 - 2758 6362 0 3 1436,1021,859, 0,1685,2745, -,-,-, 672984 Satellite W-chromosome 585 chrUn_NT_468966v1 6374 8837 GGXHOI 560 - 6374 8837 0 5 482,393,49,305,274, 0,832,1600,1671,2189, -,-,-,-,-, 672987 Satellite W-chromosome 585 chrUn_NT_468966v1 8880 10183 GGXHOI 576 - 8880 10183 0 2 526,436, 0,867, -,-, 672992 Satellite W-chromosome 585 chrUn_NT_468967v1 3490 4363 GGXHOI 378 - 3490 4363 0 3 429,253,150, 0,448,723, -,-,-, 672997 Satellite W-chromosome 585 chrUn_NT_468967v1 5579 6851 GGXHOI 382 - 5579 6851 0 3 246,849,143, 0,261,1129, -,-,-, 672999 Satellite W-chromosome 585 chrUn_NT_468967v1 6950 7870 GGXHOI 363 - 6950 7870 0 3 308,347,233, 0,325,687, -,-,-, 673000 Satellite W-chromosome 585 chrUn_NT_468967v1 8031 10586 GGXHOI 377 - 8031 10586 0 3 842,1377,272, 0,865,2283, -,-,-, 673001 Satellite W-chromosome 585 chrUn_NT_468970v1 2146 2289 (TTTCCGTTG)n 883 + 2146 2289 0 2 38,49, 0,94, +,+, 673021 Simple_repeat Simple_repeat 585 chrUn_NT_468970v1 7263 7409 (GTTCTTTCC)n 887 + 7263 7409 0 2 46,44, 0,102, +,+, 673038 Simple_repeat Simple_repeat 585 chrUn_NT_468973v1 3399 4022 CR1-H 678 - 3399 4022 0 2 139,478, 0,145, -,-, 673053 LINE CR1 585 chrUn_NT_468973v1 6591 7864 CR1-H 711 - 6591 7864 0 3 118,425,717, 0,118,556, -,-,-, 673057 LINE CR1 585 chrUn_NT_468973v1 9613 9722 (TTTGC)n 326 + 9613 9722 0 2 52,8, 0,101, +,+, 673058 Simple_repeat Simple_repeat 585 chrUn_NT_468974v1 2654 10179 GGXHOI 354 - 2654 10179 0 6 743,2475,880,326,558,2459, 0,759,3251,4150,4492,5066, -,-,-,-,-,-, 673062 Satellite W-chromosome 585 chrUn_NT_468975v1 9037 10156 CR1-B2 635 - 9037 10156 0 2 893,223, 0,896, -,-, 673072 LINE CR1 585 chrUn_NT_468977v1 3524 5992 GGLTR7-int 595 + 3524 5992 0 2 338,793, 0,1675, +,+, 673081 LTR ERV1 585 chrUn_NT_468977v1 6004 8449 GGERV10_LTR 848 - 6004 8449 0 2 38,41, 0,2404, -,-, 673084 LTR ERVL 585 chrUn_NT_468977v1 6170 8407 GGLTR10D-int 910 - 6170 8407 0 2 363,1871, 0,366, -,-, 673085 LTR ERVK 585 chrUn_NT_468977v1 8470 8862 (CGAGG)n 600 + 8470 8862 0 2 202,178, 0,214, +,+, 673086 Simple_repeat Simple_repeat 585 chrUn_NT_468978v1 4029 4485 CR1-H 672 + 4029 4485 0 2 296,160, 0,296, +,+, 673099 LINE CR1 585 chrUn_NT_468978v1 6645 7271 CR1-H 686 + 6645 7271 0 2 468,139, 0,487, +,+, 673102 LINE CR1 585 chrUn_NT_468979v1 1628 1748 (CGCACG)n 172 + 1628 1748 0 2 68,23, 0,97, +,+, 673110 Simple_repeat Simple_repeat 585 chrUn_NT_468979v1 3421 4027 (GGATG)n 660 + 3421 4027 0 3 182,181,185, 0,219,421, +,+,+, 673116 Simple_repeat Simple_repeat 585 chrUn_NT_468979v1 8770 9419 (CCCCATTGGG)n 409 + 8770 9419 0 2 120,467, 0,182, +,+, 673130 Satellite Satellite 585 chrUn_NT_468979v1 9548 9999 (CCCCATTGGG)n 405 + 9548 9999 0 3 125,121,114, 0,159,337, +,+,+, 673131 Satellite Satellite 585 chrUn_NT_468980v1 1536 1725 (AGG)n 838 + 1536 1725 0 3 22,22,22, 0,83,167, +,+,+, 673136 Simple_repeat Simple_repeat 585 chrUn_NT_468980v1 4061 4165 (AGG)n 855 + 4061 4165 0 2 22,22, 0,82, +,+, 673140 Simple_repeat Simple_repeat 585 chrUn_NT_468980v1 6485 6843 (AGG)n 824 + 6485 6843 0 5 22,22,22,22,22, 0,84,168,252,336, +,+,+,+,+, 673144 Simple_repeat Simple_repeat 585 chrUn_NT_468980v1 9168 9358 (AGG)n 838 + 9168 9358 0 3 22,22,22, 0,84,168, +,+,+, 673148 Simple_repeat Simple_repeat 585 chrUn_NT_468981v1 3226 4408 GGXHOI 376 - 3226 4408 0 2 371,788, 0,394, -,-, 673153 Satellite W-chromosome 585 chrUn_NT_468981v1 4555 7756 GGXHOI 367 - 4555 7756 0 3 432,695,2012, 0,451,1189, -,-,-, 673154 Satellite W-chromosome 585 chrUn_NT_468982v1 2140 9649 GGXHOI 539 + 2140 9649 0 13 439,193,256,194,245,194,294,194,247,194,372,20,515, 0,883,1388,2091,2607,3295,3811,4502,5017,5711,6227,6916,6994, +,+,+,+,+,+,+,+,+,+,+,+,+, 673162 Satellite W-chromosome 585 chrUn_NT_468982v1 9757 10559 GGXHOI 407 + 9757 10559 0 3 122,128,468, 0,153,334, +,+,+, 673174 Satellite W-chromosome 585 chrUn_NT_468984v1 657 1280 CR1-H 388 + 657 1280 0 2 208,379, 0,244, +,+, 673177 LINE CR1 585 chrUn_NT_468984v1 3161 3785 CR1-H 378 + 3161 3785 0 2 209,379, 0,245, +,+, 673180 LINE CR1 585 chrUn_NT_468984v1 5666 6290 CR1-H 378 + 5666 6290 0 2 209,379, 0,245, +,+, 673183 LINE CR1 585 chrUn_NT_468984v1 8171 8795 CR1-H 378 + 8171 8795 0 2 209,379, 0,245, +,+, 673186 LINE CR1 585 chrUn_NT_468985v1 2712 5771 GGLTR7-int 433 - 2712 5771 0 5 277,939,403,156,103, 0,324,1408,2338,2956, -,-,-,-,-, 673190 LTR ERV1 585 chrUn_NT_468986v1 4374 7110 GGXHOI 359 - 4374 7110 0 2 1284,1432, 0,1304, -,-, 673199 Satellite W-chromosome 585 chrUn_NT_468986v1 7311 9069 GGXHOI 367 - 7311 9069 0 3 1112,275,297, 0,1170,1461, -,-,-, 673200 Satellite W-chromosome 585 chrUn_NT_468987v1 8835 10556 Z-REP 342 - 8835 10556 0 2 1170,264, 0,1457, -,-, 673209 Satellite macro 585 chrUn_NT_468988v1 2620 5444 GGXHOI 360 - 2620 5444 0 4 443,494,413,1420, 0,470,980,1404, -,-,-,-, 673211 Satellite W-chromosome 585 chrUn_NT_468988v1 5510 6687 GGXHOI 373 - 5510 6687 0 2 380,781, 0,396, -,-, 673212 Satellite W-chromosome 585 chrUn_NT_468988v1 7540 10497 GGXHOI 353 - 7540 10497 0 4 1422,245,345,851, 0,1437,1699,2106, -,-,-,-, 673214 Satellite W-chromosome 585 chrUn_NT_468989v1 793 4340 GGXHOI 312 - 793 4340 0 3 2576,776,137, 0,2597,3410, -,-,-, 673216 Satellite W-chromosome 585 chrUn_NT_468989v1 5604 6283 GGXHOI 331 - 5604 6283 0 2 284,379, 0,300, -,-, 673218 Satellite W-chromosome 585 chrUn_NT_468989v1 6457 8440 GGXHOI 343 - 6457 8440 0 2 114,1814, 0,169, -,-, 673219 Satellite W-chromosome 585 chrUn_NT_468989v1 8603 10549 GGXHOI 365 - 8603 10549 0 3 340,228,1312, 0,358,634, -,-,-, 673220 Satellite W-chromosome 585 chrUn_NT_468991v1 433 3666 GGXHOI 370 + 433 3666 0 3 1271,836,1083, 0,1288,2150, +,+,+, 673223 Satellite W-chromosome 585 chrUn_NT_468991v1 3989 10419 GGXHOI 384 + 3989 10419 0 5 1528,1102,505,2915,223, 0,1554,2682,3243,6207, +,+,+,+,+, 673224 Satellite W-chromosome 585 chrUn_NT_468992v1 2859 3298 GGXHOI 393 - 2859 3298 0 2 243,183, 0,256, -,-, 673226 Satellite W-chromosome 585 chrUn_NT_468992v1 4956 10523 GGXHOI 367 - 4956 10523 0 6 147,1489,1803,640,888,394, 0,209,1727,3589,4246,5173, -,-,-,-,-,-, 673228 Satellite W-chromosome 585 chrUn_NT_468993v1 8501 9418 (CTCTATGGGG)n 635 - 8501 9418 0 5 62,50,217,125,248, 0,182,255,502,669, -,-,-,-,-, 673235 Satellite Satellite 585 chrUn_NT_468993v1 8563 8818 (ACCCATAGAG)n 585 + 8563 8818 0 2 120,135, 0,120, +,+, 673236 Satellite Satellite 585 chrUn_NT_468993v1 9853 10509 (CTCTATGGGG)n 541 - 9853 10509 0 4 202,19,108,21, 0,365,403,635, -,-,-,-, 673239 Satellite Satellite 585 chrUn_NT_468995v1 7807 7946 (CC)n 471 + 7807 7946 0 2 38,64, 0,75, +,+, 673249 Simple_repeat Simple_repeat 585 chrUn_NT_468996v1 9598 10159 (GATATG)n 384 + 9598 10159 0 2 142,364, 0,197, +,+, 673260 Simple_repeat Simple_repeat 585 chrUn_NT_468997v1 3667 4011 (GTTCTTTCC)n 964 + 3667 4011 0 4 43,43,43,47, 0,99,198,297, +,+,+,+, 673267 Simple_repeat Simple_repeat 585 chrUn_NT_468997v1 6515 6844 (GTTCTTTCC)n 939 + 6515 6844 0 4 42,43,39,39, 0,98,197,290, +,+,+,+, 673271 Simple_repeat Simple_repeat 585 chrUn_NT_468997v1 7254 7390 (GTTCTTTCC)n 1000 + 7254 7390 0 2 38,43, 0,93, +,+, 673274 Simple_repeat Simple_repeat 585 chrUn_NT_468997v1 9736 9975 (GTTCTTTCC)n 891 + 9736 9975 0 3 42,44,43, 0,97,196, +,+,+, 673281 Simple_repeat Simple_repeat 585 chrUn_NT_468997v1 10192 10332 (GTTCTTTCC)n 924 + 10192 10332 0 2 40,44, 0,96, +,+, 673282 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 387 1016 (CGAGG)n 552 + 387 1016 0 3 174,182,191, 0,221,438, +,+,+, 673285 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 1096 1706 (CGAGG)n 660 + 1096 1706 0 2 178,402, 0,208, +,+, 673287 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 1795 3406 (CGAGG)n 546 + 1795 3406 0 5 254,185,188,734,189, 0,273,477,676,1422, +,+,+,+,+, 673289 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 3954 4530 (CCTCG)n 564 + 3954 4530 0 2 199,200, 0,376, +,+, 673293 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 4775 5619 (CCTCG)n 473 + 4775 5619 0 3 433,184,183, 0,452,661, +,+,+, 673296 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 5701 6445 (CCTCG)n 520 + 5701 6445 0 2 180,503, 0,241, +,+, 673298 Simple_repeat Simple_repeat 585 chrUn_NT_468998v1 6654 8017 (CCTCG)n 435 + 6654 8017 0 3 557,89,700, 0,571,663, +,+,+, 673300 Simple_repeat Simple_repeat 585 chrUn_NT_469002v1 883 1792 GGXHOI 417 - 883 1792 0 3 486,146,253, 0,499,656, -,-,-, 673344 Satellite W-chromosome 585 chrUn_NT_469002v1 3028 10485 GGXHOI 411 - 3028 10485 0 7 2107,1187,1166,119,146,2495,148, 0,2126,3329,4506,4638,4795,7309, -,-,-,-,-,-,-, 673347 Satellite W-chromosome 585 chrUn_NT_469003v1 1939 2841 GGXHOI 345 + 1939 2841 0 2 206,666, 0,236, +,+, 673349 Satellite W-chromosome 585 chrUn_NT_469003v1 4537 5655 GGXHOI 296 - 4537 5655 0 2 705,351, 0,767, -,-, 673351 Satellite W-chromosome 585 chrUn_NT_469003v1 6125 8124 GGXHOI 309 - 6125 8124 0 3 1386,128,438, 0,1397,1561, -,-,-, 673352 Satellite W-chromosome 585 chrUn_NT_469003v1 8208 9704 GGXHOI 329 - 8208 9704 0 2 927,525, 0,971, -,-, 673353 Satellite W-chromosome 585 chrUn_NT_469004v1 639 3202 GGXHOI 351 + 639 3202 0 4 431,279,1421,311, 0,486,810,2252, +,+,+,+, 673357 Satellite W-chromosome 585 chrUn_NT_469004v1 3364 10550 GGXHOI 401 - 3364 10550 0 5 673,2300,577,2583,894, 0,690,3046,3663,6292, -,-,-,-,-, 673360 Satellite W-chromosome 585 chrUn_NT_469005v1 7148 10551 GGXHOI 506 - 7148 10551 0 2 439,2947, 0,456, -,-, 673362 Satellite W-chromosome 585 chrUn_NT_469008v1 3947 4255 CR1-X 515 + 3947 4255 0 3 171,77,50, 0,171,258, +,+,+, 673383 LINE CR1 585 chrUn_NT_469009v1 3252 3531 (ACCCCATAGGG)n 445 + 3252 3531 0 2 119,111, 0,168, +,+, 673389 Satellite Satellite 585 chrUn_NT_469009v1 3774 3996 (ACCCCATAGGG)n 422 + 3774 3996 0 2 84,23, 0,199, +,+, 673390 Satellite Satellite 585 chrUn_NT_469009v1 5387 5698 (CCCCATTGGG)n 322 - 5387 5698 0 2 67,115, 0,196, -,-, 673396 Satellite Satellite 585 chrUn_NT_469009v1 7021 7303 (CCCCATTGGG)n 253 + 7021 7303 0 2 124,128, 0,154, +,+, 673403 Satellite Satellite 585 chrUn_NT_469009v1 8174 8442 (CCCCATTGGG)n 350 + 8174 8442 0 2 111,109, 0,159, +,+, 673406 Satellite Satellite 585 chrUn_NT_469009v1 8507 8763 (CCCCATTGGG)n 312 + 8507 8763 0 2 113,114, 0,142, +,+, 673407 Satellite Satellite 585 chrUn_NT_469011v1 5764 6626 (CGGA)n 408 + 5764 6626 0 3 88,78,155, 0,452,707, +,+,+, 673424 Simple_repeat Simple_repeat 585 chrUn_NT_469011v1 7909 8596 (CGGA)n 372 + 7909 8596 0 2 100,394, 0,293, +,+, 673429 Simple_repeat Simple_repeat 585 chrUn_NT_469012v1 3235 5038 GGXHOI 360 + 3235 5038 0 3 961,571,216, 0,1002,1587, +,+,+, 673439 Satellite W-chromosome 585 chrUn_NT_469012v1 5146 10415 GGXHOI 386 + 5146 10415 0 5 589,1005,380,1245,1923, 0,614,1677,2078,3346, +,+,+,+,+, 673440 Satellite W-chromosome 585 chrUn_NT_469013v1 4452 4584 GA-rich 340 + 4452 4584 0 2 43,28, 0,104, +,+, 673446 Low_complexity Low_complexity 585 chrUn_NT_469014v1 7077 7361 (CTCTATGGGG)n 587 + 7077 7361 0 2 139,124, 0,160, +,+, 673462 Satellite Satellite 585 chrUn_NT_469014v1 7718 8408 (CTCTATGGGG)n 561 + 7718 8408 0 4 176,124,114,145, 0,207,390,545, +,+,+,+, 673465 Satellite Satellite 585 chrUn_NT_469014v1 8542 9142 (CTCTATGGGG)n 509 + 8542 9142 0 3 142,131,277, 0,170,323, +,+,+, 673466 Satellite Satellite 585 chrUn_NT_469014v1 9168 10273 (CTCTATGGGG)n 690 + 9168 10273 0 3 711,181,61, 0,739,1044, +,+,+, 673468 Satellite Satellite 585 chrUn_NT_469014v1 10255 10493 (ACCCATAGAG)n 542 - 10255 10493 0 2 82,39, 0,199, -,-, 673470 Satellite Satellite 585 chrUn_NT_469016v1 479 1443 GGXHOI 392 + 479 1443 0 2 385,516, 0,448, +,+, 673483 Satellite W-chromosome 585 chrUn_NT_469016v1 1542 3078 GGXHOI 385 + 1542 3078 0 2 472,1002, 0,534, +,+, 673484 Satellite W-chromosome 585 chrUn_NT_469017v1 2665 3255 GGLTR11 677 + 2665 3255 0 2 266,248, 0,342, +,+, 673495 LTR ERV1 585 chrUn_NT_469018v1 1253 4665 GGLTR7-int 373 - 1253 4665 0 4 168,954,1578,119, 0,216,1243,3293, -,-,-,-, 673504 LTR ERV1 585 chrUn_NT_469019v1 2683 3428 GGXHOI 405 + 2683 3428 0 2 303,393, 0,352, +,+, 673515 Satellite W-chromosome 585 chrUn_NT_469019v1 3580 10079 GGXHOI 363 + 3580 10079 0 6 419,4236,440,215,924,161, 0,438,4690,5145,5392,6338, +,+,+,+,+,+, 673516 Satellite W-chromosome 585 chrUn_NT_469020v1 1705 3171 GGXHOI 383 - 1705 3171 0 3 727,357,351, 0,743,1115, -,-,-, 673519 Satellite W-chromosome 585 chrUn_NT_469020v1 5277 9385 GGXHOI 363 - 5277 9385 0 3 141,1001,2934, 0,157,1174, -,-,-, 673523 Satellite W-chromosome 585 chrUn_NT_469020v1 9656 10433 GGXHOI 366 - 9656 10433 0 3 84,297,340, 0,99,437, -,-,-, 673524 Satellite W-chromosome 585 chrUn_NT_469021v1 2418 4346 GGXHOI 374 - 2418 4346 0 3 505,957,385, 0,523,1543, -,-,-, 673528 Satellite W-chromosome 585 chrUn_NT_469021v1 5022 6126 GGXHOI 307 - 5022 6126 0 3 277,538,223, 0,299,881, -,-,-, 673530 Satellite W-chromosome 585 chrUn_NT_469021v1 6874 7523 GGXHOI 325 - 6874 7523 0 2 299,292, 0,357, -,-, 673531 Satellite W-chromosome 585 chrUn_NT_469022v1 6883 7019 CR1-X1 417 - 6883 7019 0 2 67,64, 0,72, -,-, 673543 LINE CR1 585 chrUn_NT_469024v1 942 4150 GGXHOI 382 - 942 4150 0 5 633,675,355,1024,446, 0,655,1345,1720,2762, -,-,-,-,-, 673549 Satellite W-chromosome 585 chrUn_NT_469024v1 4231 6674 GGXHOI 395 - 4231 6674 0 6 149,352,628,475,555,199, 0,164,535,1182,1672,2244, -,-,-,-,-,-, 673550 Satellite W-chromosome 585 chrUn_NT_469024v1 7566 10517 GGXHOI 381 - 7566 10517 0 7 147,268,349,459,684,356,557, 0,162,485,849,1319,2018,2394, -,-,-,-,-,-,-, 673552 Satellite W-chromosome 585 chrUn_NT_469028v1 2062 3066 GGXHOI 341 - 2062 3066 0 2 713,266, 0,738, -,-, 673571 Satellite W-chromosome 585 chrUn_NT_469028v1 3619 5072 GGXHOI 342 - 3619 5072 0 2 679,716, 0,737, -,-, 673573 Satellite W-chromosome 585 chrUn_NT_469028v1 5212 6748 GGXHOI 366 - 5212 6748 0 2 924,554, 0,982, -,-, 673574 Satellite W-chromosome 585 chrUn_NT_469028v1 6925 8182 GGXHOI 334 - 6925 8182 0 3 338,535,272, 0,392,985, -,-,-, 673575 Satellite W-chromosome 585 chrUn_NT_469028v1 8334 9139 GGXHOI 358 - 8334 9139 0 2 269,478, 0,327, -,-, 673576 Satellite W-chromosome 585 chrUn_NT_469029v1 4125 4507 (CAAGG)n 628 + 4125 4507 0 2 111,98, 0,284, +,+, 673590 Simple_repeat Simple_repeat 585 chrUn_NT_469029v1 4527 5571 CR1-F0 883 + 4527 5571 0 2 608,436, 0,608, +,+, 673592 LINE CR1 585 chrUn_NT_469030v1 7279 7418 CR1-Y4 527 - 7279 7418 0 2 66,62, 0,77, -,-, 673598 LINE CR1 585 chrUn_NT_469031v1 863 3045 GGLTR10D-int 898 + 863 3045 0 2 1815,364, 0,1818, +,+, 673603 LTR ERVK 585 chrUn_NT_469031v1 3225 5530 GGLTR7-int 564 - 3225 5530 0 3 774,543,260, 0,782,2045, -,-,-, 673604 LTR ERV1 585 chrUn_NT_469032v1 2088 4222 Z-REP 716 - 2088 4222 0 2 1222,155, 0,1979, -,-, 673613 Satellite macro 585 chrUn_NT_469032v1 4996 9659 GGLTR7A 783 + 4996 9659 0 4 53,39,4024,414, 0,64,115,4249, +,+,+,+, 673616 LTR ERV1 585 chrUn_NT_469033v1 2894 3768 G-rich 295 + 2894 3768 0 3 219,156,405, 0,258,469, +,+,+, 673626 Low_complexity Low_complexity 585 chrUn_NT_469033v1 6224 8650 GGLTR7-int 601 + 6224 8650 0 2 335,782, 0,1644, +,+, 673629 LTR ERV1 585 chrUn_NT_469033v1 8827 10503 GGLTR10D-int 922 - 8827 10503 0 2 354,1319, 0,357, -,-, 673633 LTR ERVK 585 chrUn_NT_469036v1 4408 9579 GGXHOI 358 - 4408 9579 0 12 172,292,409,179,764,267,274,547,1101,550,259,84, 0,193,501,928,1123,1949,2240,2553,3132,4250,4813,5087, -,-,-,-,-,-,-,-,-,-,-,-, 673653 Satellite W-chromosome 585 chrUn_NT_469036v1 9667 10382 GGXHOI 340 - 9667 10382 0 3 159,420,107, 0,175,608, -,-,-, 673654 Satellite W-chromosome 585 chrUn_NT_469037v1 235 4235 (TTAGGG)n 630 + 235 4235 0 13 172,693,83,230,172,189,239,174,177,132,159,77,449, 0,200,912,1171,1425,1624,1813,2081,2266,2467,2939,3292,3551, +,+,+,+,+,+,+,+,+,+,+,+,+, 673657 Simple_repeat Simple_repeat 585 chrUn_NT_469037v1 4302 4705 (TTAGGG)n 600 + 4302 4705 0 2 174,183, 0,220, +,+, 673664 Simple_repeat Simple_repeat 585 chrUn_NT_469037v1 4759 5238 (TTAGGG)n 569 + 4759 5238 0 2 274,184, 0,295, +,+, 673666 Simple_repeat Simple_repeat 585 chrUn_NT_469037v1 6019 6799 (CCCTAA)n 537 + 6019 6799 0 2 572,178, 0,602, +,+, 673671 Simple_repeat Simple_repeat 585 chrUn_NT_469037v1 6819 8010 (CCCTAA)n 643 + 6819 8010 0 3 416,181,545, 0,434,646, +,+,+, 673673 Simple_repeat Simple_repeat 585 chrUn_NT_469037v1 8073 9187 (CCCTAA)n 608 + 8073 9187 0 5 192,194,213,270,13, 0,192,398,635,1101, +,+,+,+,+, 673676 Simple_repeat Simple_repeat 585 chrUn_NT_469038v1 4963 5657 GGXHOI 323 - 4963 5657 0 2 358,278, 0,416, -,-, 673685 Satellite W-chromosome 585 chrUn_NT_469039v1 3536 8064 GGXHOI 397 - 3536 8064 0 5 1640,500,429,1258,535, 0,1667,2218,2702,3993, -,-,-,-,-, 673692 Satellite W-chromosome 585 chrUn_NT_469039v1 8206 8488 GGXHOI 402 - 8206 8488 0 2 130,133, 0,149, -,-, 673693 Satellite W-chromosome 585 chrUn_NT_469040v1 228 7653 Z-REP 795 + 228 7653 0 3 161,826,5680, 0,908,1745, +,+,+, 673697 Satellite macro 585 chrUn_NT_469041v1 232 783 (CAAGG)n 632 + 232 783 0 2 173,20, 0,531, +,+, 673701 Simple_repeat Simple_repeat 585 chrUn_NT_469042v1 637 770 GA-rich 308 + 637 770 0 2 51,32, 0,101, +,+, 673718 Low_complexity Low_complexity 585 chrUn_NT_469043v1 524 2896 GGXHOI 371 + 524 2896 0 3 1680,334,272, 0,1705,2100, +,+,+, 673756 Satellite W-chromosome 585 chrUn_NT_469043v1 3924 5745 GGXHOI 376 + 3924 5745 0 2 650,1146, 0,675, +,+, 673758 Satellite W-chromosome 585 chrUn_NT_469043v1 7410 9015 GGXHOI 389 + 7410 9015 0 2 799,777, 0,828, +,+, 673761 Satellite W-chromosome 585 chrUn_NT_469044v1 570 3821 GGERVL-A-int 785 + 570 3821 0 3 2198,492,560, 0,2198,2691, +,+,+, 673765 LTR ERVL 585 chrUn_NT_469044v1 3807 6498 GGLTR3F1 949 + 3807 6498 0 2 2198,493, 0,2198, +,+, 673766 LTR ERVL 585 chrUn_NT_469044v1 6502 8173 GGLTR3F1 963 + 6502 8173 0 2 1178,493, 0,1178, +,+, 673767 LTR ERVL 585 chrUn_NT_469044v1 8176 9843 GGLTR3F1 938 + 8176 9843 0 2 1176,491, 0,1176, +,+, 673768 LTR ERVL 585 chrUn_NT_469045v1 2948 8719 GGXHOI 421 - 2948 8719 0 4 3290,1595,343,494, 0,3307,4918,5277, -,-,-,-, 673772 Satellite W-chromosome 585 chrUn_NT_469045v1 8791 10467 GGXHOI 331 - 8791 10467 0 2 158,1472, 0,204, -,-, 673773 Satellite W-chromosome 585 chrUn_NT_469048v1 542 3736 GGXHOI 389 + 542 3736 0 3 1726,638,791, 0,1743,2403, +,+,+, 673791 Satellite W-chromosome 585 chrUn_NT_469048v1 3835 8987 GGXHOI 423 + 3835 8987 0 7 355,267,888,888,667,1540,429, 0,373,663,1568,2477,3160,4723, +,+,+,+,+,+,+, 673792 Satellite W-chromosome 585 chrUn_NT_469049v1 1416 2403 (GCCCCACAGCT)n 376 + 1416 2403 0 3 142,343,458, 0,159,529, +,+,+, 673801 Satellite Satellite 585 chrUn_NT_469049v1 2470 3365 (GCCCCACAGCT)n 426 + 2470 3365 0 5 129,176,196,29,140, 0,150,353,675,755, +,+,+,+,+, 673802 Satellite Satellite 585 chrUn_NT_469049v1 3338 3623 (GCCCCACAGCT)n 424 - 3338 3623 0 2 141,21, 0,264, -,-, 673804 Satellite Satellite 585 chrUn_NT_469049v1 3649 4060 (GCCCCACAGCT)n 459 + 3649 4060 0 2 109,228, 0,183, +,+, 673806 Satellite Satellite 585 chrUn_NT_469049v1 4081 4479 (GCCCCACAGCT)n 458 + 4081 4479 0 2 176,195, 0,203, +,+, 673809 Satellite Satellite 585 chrUn_NT_469049v1 4513 4941 (GCCCCACAGCT)n 427 + 4513 4941 0 2 186,215, 0,213, +,+, 673811 Satellite Satellite 585 chrUn_NT_469049v1 4965 8028 (GCCCCACAGCT)n 476 + 4965 8028 0 12 137,404,257,136,415,231,116,203,271,92,68,142, 0,170,625,882,1067,1509,1791,1983,2237,2633,2853,2921, +,+,+,+,+,+,+,+,+,+,+,+, 673813 Satellite Satellite 585 chrUn_NT_469050v1 686 9831 GGXHOI 416 + 686 9831 0 6 333,301,3012,4215,316,860, 0,347,666,3695,7938,8285, +,+,+,+,+,+, 673819 Satellite W-chromosome 585 chrUn_NT_469050v1 10001 10456 GGXHOI 434 + 10001 10456 0 2 260,171, 0,284, +,+, 673820 Satellite W-chromosome 585 chrUn_NT_469053v1 1939 4058 GGXHOI 375 + 1939 4058 0 3 301,168,1585, 0,347,534, +,+,+, 673833 Satellite W-chromosome 585 chrUn_NT_469053v1 4166 5230 GGXHOI 342 + 4166 5230 0 2 819,213, 0,851, +,+, 673834 Satellite W-chromosome 585 chrUn_NT_469053v1 5338 10473 GGXHOI 420 + 5338 10473 0 2 2324,2798, 0,2337, +,+, 673835 Satellite W-chromosome 585 chrUn_NT_469055v1 1226 1443 A-rich 206 + 1226 1443 0 2 62,98, 0,119, +,+, 673850 Low_complexity Low_complexity 585 chrUn_NT_469055v1 4863 5344 GA-rich 353 + 4863 5344 0 2 61,359, 0,122, +,+, 673863 Low_complexity Low_complexity 585 chrUn_NT_469056v1 4209 5633 GGXHOI 363 - 4209 5633 0 4 380,220,219,513, 0,401,674,911, -,-,-,-, 673885 Satellite W-chromosome 585 chrUn_NT_469056v1 5788 6776 GGXHOI 352 - 5788 6776 0 2 672,304, 0,684, -,-, 673886 Satellite W-chromosome 585 chrUn_NT_469056v1 6842 9797 GGXHOI 350 - 6842 9797 0 4 123,177,1885,713, 0,139,339,2242, -,-,-,-, 673887 Satellite W-chromosome 585 chrUn_NT_469058v1 302 6206 (CTCTATGGGG)n 312 - 302 6206 0 2 56,62, 0,5842, -,-, 673902 Satellite Satellite 585 chrUn_NT_469059v1 1045 1670 (CGAGG)n 541 + 1045 1670 0 3 145,241,177, 0,162,448, +,+,+, 673920 Simple_repeat Simple_repeat 585 chrUn_NT_469059v1 2028 2428 (CGAGG)n 565 + 2028 2428 0 2 183,176, 0,224, +,+, 673921 Simple_repeat Simple_repeat 585 chrUn_NT_469059v1 2632 3510 (CGAGG)n 499 + 2632 3510 0 2 187,633, 0,245, +,+, 673922 Simple_repeat Simple_repeat 585 chrUn_NT_469059v1 5366 5766 (CGAGG)n 571 + 5366 5766 0 2 183,176, 0,224, +,+, 673928 Simple_repeat Simple_repeat 585 chrUn_NT_469059v1 5970 6849 (CGAGG)n 500 + 5970 6849 0 2 187,634, 0,245, +,+, 673929 Simple_repeat Simple_repeat 585 chrUn_NT_469059v1 8728 9127 (CGAGG)n 571 + 8728 9127 0 2 183,175, 0,224, +,+, 673934 Simple_repeat Simple_repeat 585 chrUn_NT_469059v1 9502 10467 (CGAGG)n 457 + 9502 10467 0 3 174,181,547, 0,209,418, +,+,+, 673936 Simple_repeat Simple_repeat 585 chrUn_NT_469060v1 1542 8293 GGXHOI 457 - 1542 8293 0 7 711,1269,1151,230,1631,189,1403, 0,734,2021,3197,3487,5142,5348, -,-,-,-,-,-,-, 673938 Satellite W-chromosome 585 chrUn_NT_469060v1 9375 10141 GGXHOI 398 - 9375 10141 0 2 149,576, 0,190, -,-, 673940 Satellite W-chromosome 585 chrUn_NT_469061v1 1151 1856 GGXHOI 331 - 1151 1856 0 2 221,465, 0,240, -,-, 673943 Satellite W-chromosome 585 chrUn_NT_469061v1 2023 4760 GGXHOI 347 - 2023 4760 0 2 1235,1484, 0,1253, -,-, 673944 Satellite W-chromosome 585 chrUn_NT_469061v1 4858 10436 GGXHOI 333 - 4858 10436 0 5 515,1377,2574,628,411, 0,538,1932,4523,5167, -,-,-,-,-, 673945 Satellite W-chromosome 585 chrUn_NT_469063v1 6302 7887 GGXHOI 371 - 6302 7887 0 2 947,621, 0,964, -,-, 673952 Satellite W-chromosome 585 chrUn_NT_469064v1 1666 2652 GGXHOI 322 - 1666 2652 0 2 568,355, 0,631, -,-, 673957 Satellite W-chromosome 585 chrUn_NT_469064v1 2728 3390 GGXHOI 358 - 2728 3390 0 2 161,468, 0,194, -,-, 673958 Satellite W-chromosome 585 chrUn_NT_469065v1 1182 9520 GGXHOI 409 + 1182 9520 0 7 1704,1281,625,617,1283,625,2021, 0,1729,3035,3701,4343,5651,6317, +,+,+,+,+,+,+, 673972 Satellite W-chromosome 585 chrUn_NT_469065v1 9636 10440 GGXHOI 369 + 9636 10440 0 3 341,183,203, 0,400,601, +,+,+, 673973 Satellite W-chromosome 585 chrUn_NT_469066v1 2113 4735 GGERVL-B-int 729 + 2113 4735 0 4 209,64,1075,913, 0,569,634,1709, +,+,+,+, 673978 LTR ERVL 585 chrUn_NT_469066v1 5472 6868 GGLTR7-int 311 + 5472 6868 0 3 101,291,280, 0,127,1116, +,+,+, 673980 LTR ERV1 585 chrUn_NT_469067v1 4710 9410 CR1-D2 548 - 4710 9410 0 2 572,825, 0,3875, -,-, 673984 LINE CR1 585 chrUn_NT_469067v1 5967 8599 CR1-D 657 - 5967 8599 0 3 1640,881,110, 0,1641,2522, -,-,-, 673985 LINE CR1 585 chrUn_NT_469067v1 9400 9627 Char12Mar1_GG 579 - 9400 9627 0 2 72,155, 0,72, -,-, 673986 DNA hAT-Charlie 585 chrUn_NT_469068v1 4634 5455 (CTCTATGGGG)n 480 + 4634 5455 0 4 244,115,51,122, 0,265,636,699, +,+,+,+, 673992 Satellite Satellite 585 chrUn_NT_469070v1 1187 3255 GGXHOI 394 - 1187 3255 0 6 322,179,181,654,395,230, 0,341,555,751,1424,1838, -,-,-,-,-,-, 674015 Satellite W-chromosome 585 chrUn_NT_469070v1 3355 4335 GGXHOI 434 - 3355 4335 0 3 359,438,154, 0,374,826, -,-,-, 674016 Satellite W-chromosome 585 chrUn_NT_469070v1 4581 5337 GGXHOI 423 - 4581 5337 0 2 175,562, 0,194, -,-, 674017 Satellite W-chromosome 585 chrUn_NT_469070v1 5587 8274 GGXHOI 362 - 5587 8274 0 6 393,693,351,435,180,553, 0,408,1116,1485,1935,2134, -,-,-,-,-,-, 674018 Satellite W-chromosome 585 chrUn_NT_469070v1 8376 10423 GGXHOI 403 - 8376 10423 0 5 228,356,688,439,270, 0,243,619,1322,1777, -,-,-,-,-, 674019 Satellite W-chromosome 585 chrUn_NT_469071v1 8434 10047 GGERVL-A-int 445 - 8434 10047 0 2 1276,337, 0,1276, -,-, 674024 LTR ERVL 585 chrUn_NT_469072v1 4765 5379 GGXHOI 279 - 4765 5379 0 2 301,299, 0,315, -,-, 674034 Satellite W-chromosome 585 chrUn_NT_469072v1 8022 8437 GGXHOI 381 - 8022 8437 0 2 181,174, 0,241, -,-, 674040 Satellite W-chromosome 585 chrUn_NT_469074v1 1011 6153 GGXHOI 411 - 1011 6153 0 4 1009,2380,604,1012, 0,1072,3469,4130, -,-,-,-, 674055 Satellite W-chromosome 585 chrUn_NT_469074v1 7933 10399 GGXHOI 398 - 7933 10399 0 3 447,1128,816, 0,504,1650, -,-,-, 674058 Satellite W-chromosome 585 chrUn_NT_469075v1 1747 2076 (TCCTC)n 444 + 1747 2076 0 2 169,111, 0,218, +,+, 674065 Simple_repeat Simple_repeat 585 chrUn_NT_469075v1 9679 9912 (TC)n 424 + 9679 9912 0 2 59,123, 0,110, +,+, 674097 Simple_repeat Simple_repeat 585 chrUn_NT_469077v1 1154 9308 GGXHOI 445 - 1154 9308 0 11 152,901,317,147,147,774,1642,483,1316,1904,178, 0,168,1080,1411,1617,1780,2570,4229,4728,6060,7976, -,-,-,-,-,-,-,-,-,-,-, 674118 Satellite W-chromosome 585 chrUn_NT_469077v1 9809 10435 GGXHOI 458 - 9809 10435 0 2 478,94, 0,532, -,-, 674120 Satellite W-chromosome 585 chrUn_NT_469078v1 1001 4558 GGXHOI 423 + 1001 4558 0 2 2655,855, 0,2702, +,+, 674123 Satellite W-chromosome 585 chrUn_NT_469078v1 6401 9403 GGXHOI 431 + 6401 9403 0 3 272,362,2300, 0,293,702, +,+,+, 674129 Satellite W-chromosome 585 chrUn_NT_469078v1 9440 10235 GGXHOI 319 + 9440 10235 0 2 520,227, 0,568, +,+, 674131 Satellite W-chromosome 585 chrUn_NT_469079v1 7161 10406 GGXHOI 433 - 7161 10406 0 3 1016,1996,165, 0,1032,3080, -,-,-, 674133 Satellite W-chromosome 585 chrUn_NT_469080v1 208 3677 GGXHOI 556 - 208 3677 0 2 490,1895, 0,1574, -,-, 674135 Satellite W-chromosome 585 chrUn_NT_469080v1 3689 4604 GGXHOI 518 - 3689 4604 0 2 296,44, 0,871, -,-, 674138 Satellite W-chromosome 585 chrUn_NT_469080v1 4700 10439 GGXHOI 540 - 4700 10439 0 8 275,327,520,488,442,162,205,13, 0,890,1797,2507,3332,4757,5248,5726, -,-,-,-,-,-,-,-, 674140 Satellite W-chromosome 585 chrUn_NT_469082v1 2578 4259 GGXHOI 400 - 2578 4259 0 2 904,760, 0,921, -,-, 674165 Satellite W-chromosome 585 chrUn_NT_469082v1 5575 6073 GGXHOI 390 - 5575 6073 0 2 98,358, 0,140, -,-, 674168 Satellite W-chromosome 585 chrUn_NT_469082v1 6308 9616 GGXHOI 385 - 6308 9616 0 4 874,1599,338,456, 0,892,2503,2852, -,-,-,-, 674169 Satellite W-chromosome 585 chrUn_NT_469083v1 9778 10279 A-rich 581 + 9778 10279 0 2 404,38, 0,463, +,+, 674205 Low_complexity Low_complexity 585 chrUn_NT_469085v1 568 870 (GCCCCACAGCT)n 425 - 568 870 0 2 125,131, 0,171, -,-, 674211 Satellite Satellite 585 chrUn_NT_469085v1 3631 4260 (GCCCCACAGCT)n 394 + 3631 4260 0 4 106,168,117,120, 0,122,337,509, +,+,+,+, 674216 Satellite Satellite 585 chrUn_NT_469086v1 1802 2920 CR1-B2 650 - 1802 2920 0 2 891,224, 0,894, -,-, 674222 LINE CR1 585 chrUn_NT_469087v1 2039 5081 GGXHOI 491 + 2039 5081 0 6 707,198,27,86,167,384, 0,719,929,1305,2104,2658, +,+,+,+,+,+, 674230 Satellite W-chromosome 585 chrUn_NT_469087v1 5124 10397 GGXHOI 527 + 5124 10397 0 8 715,731,213,392,28,264,309,274, 0,1032,2006,2700,3326,4075,4633,4999, +,+,+,+,+,+,+,+, 674235 Satellite W-chromosome 585 chrUn_NT_469088v1 7964 9484 (CCTTG)n 588 + 7964 9484 0 7 184,17,21,124,194,6,213, 0,360,555,795,936,1282,1307, +,+,+,+,+,+,+, 674251 Simple_repeat Simple_repeat 585 chrUn_NT_469088v1 8540 8998 (GCCTG)n 585 + 8540 8998 0 2 219,239, 0,219, +,+, 674254 Simple_repeat Simple_repeat 585 chrUn_NT_469088v1 9470 9880 (GCCTG)n 494 + 9470 9880 0 2 217,174, 0,236, +,+, 674256 Simple_repeat Simple_repeat 585 chrUn_NT_469089v1 5906 6542 G-rich 419 + 5906 6542 0 2 38,549, 0,87, +,+, 674268 Low_complexity Low_complexity 585 chrUn_NT_469092v1 3794 10427 GGXHOI 343 - 3794 10427 0 9 138,117,452,1370,3116,333,145,642,130, 0,164,299,778,2164,5298,5648,5835,6503, -,-,-,-,-,-,-,-,-, 674322 Satellite W-chromosome 585 chrUn_NT_469093v1 1263 8748 GGXHOI 423 - 1263 8748 0 5 137,92,1517,3269,2380, 0,153,285,1820,5105, -,-,-,-,-, 674324 Satellite W-chromosome 585 chrUn_NT_469093v1 8814 9336 GGXHOI 363 - 8814 9336 0 2 343,156, 0,366, -,-, 674325 Satellite W-chromosome 585 chrUn_NT_469097v1 1009 1656 CR1-X2 591 + 1009 1656 0 2 354,63, 0,584, +,+, 674364 LINE CR1 585 chrUn_NT_469098v1 9088 9549 GGLTR3F2 600 + 9088 9549 0 2 228,195, 0,266, +,+, 674383 LTR ERVL 585 chrUn_NT_469099v1 1739 2149 GGXHOI 333 - 1739 2149 0 2 177,219, 0,191, -,-, 674389 Satellite W-chromosome 585 chrUn_NT_469099v1 5307 5693 GGXHOI 315 - 5307 5693 0 2 159,179, 0,207, -,-, 674395 Satellite W-chromosome 585 chrUn_NT_469099v1 6817 7616 GGXHOI 303 - 6817 7616 0 2 262,479, 0,320, -,-, 674397 Satellite W-chromosome 585 chrUn_NT_469099v1 9606 10402 GGXHOI 317 - 9606 10402 0 3 131,282,330, 0,168,466, -,-,-, 674401 Satellite W-chromosome 585 chrUn_NT_469100v1 3547 6766 GGXHOI 337 + 3547 6766 0 3 579,2049,552, 0,601,2667, +,+,+, 674403 Satellite W-chromosome 585 chrUn_NT_469100v1 7697 9617 GGXHOI 349 + 7697 9617 0 3 1041,461,375, 0,1053,1545, +,+,+, 674405 Satellite W-chromosome 585 chrUn_NT_469101v1 1097 2151 CR1-X2 488 + 1097 2151 0 2 876,178, 0,876, +,+, 674410 LINE CR1 585 chrUn_NT_469101v1 4736 5417 CR1-Y2_Aves 237 - 4736 5417 0 2 387,294, 0,387, -,-, 674415 LINE CR1 585 chrUn_NT_469102v1 625 3931 GGXHOI 447 + 625 3931 0 3 446,1221,1601, 0,466,1705, +,+,+, 674419 Satellite W-chromosome 585 chrUn_NT_469102v1 4005 4931 GGXHOI 369 + 4005 4931 0 2 135,774, 0,152, +,+, 674420 Satellite W-chromosome 585 chrUn_NT_469102v1 5097 8044 GGXHOI 335 + 5097 8044 0 8 424,179,159,124,176,1285,288,125, 0,444,662,863,1005,1195,2498,2822, +,+,+,+,+,+,+,+, 674421 Satellite W-chromosome 585 chrUn_NT_469103v1 2824 2972 (GTTCTTTCC)n 953 + 2824 2972 0 2 45,44, 0,104, +,+, 674433 Simple_repeat Simple_repeat 585 chrUn_NT_469103v1 7793 7968 (GTTGTTTCC)n 898 + 7793 7968 0 2 70,54, 0,121, +,+, 674450 Simple_repeat Simple_repeat 585 chrUn_NT_469103v1 9710 9874 (GTTGTTTCC)n 931 + 9710 9874 0 2 61,50, 0,114, +,+, 674459 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 207 1392 (CGAGG)n 507 + 207 1392 0 4 133,179,494,292, 0,146,354,893, +,+,+,+, 674463 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 2837 3682 (CGAGG)n 502 + 2837 3682 0 3 86,264,134, 0,270,711, +,+,+, 674468 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 5013 5312 (CGAGG)n 508 + 5013 5312 0 2 186,100, 0,199, +,+, 674476 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 5675 6650 (CCTCG)n 579 + 5675 6650 0 3 151,110,515, 0,339,460, +,+,+, 674479 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 6663 6907 (CCTCG)n 506 + 6663 6907 0 2 180,40, 0,204, +,+, 674482 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 6953 7592 (CCTCG)n 513 + 6953 7592 0 2 143,446, 0,193, +,+, 674484 Simple_repeat Simple_repeat 585 chrUn_NT_469104v1 8145 9340 (CCTCG)n 557 + 8145 9340 0 4 408,338,184,189, 0,430,808,1006, +,+,+,+, 674487 Simple_repeat Simple_repeat 585 chrUn_NT_469105v1 694 1080 GGXHOI 360 - 694 1080 0 2 146,223, 0,163, -,-, 674494 Satellite W-chromosome 585 chrUn_NT_469105v1 2811 3626 GGXHOI 409 - 2811 3626 0 2 299,495, 0,320, -,-, 674500 Satellite W-chromosome 585 chrUn_NT_469105v1 3705 5638 GGXHOI 383 - 3705 5638 0 3 664,731,497, 0,686,1436, -,-,-, 674502 Satellite W-chromosome 585 chrUn_NT_469105v1 5979 6526 GGXHOI 358 - 5979 6526 0 2 320,181, 0,366, -,-, 674505 Satellite W-chromosome 585 chrUn_NT_469105v1 6620 8110 GGXHOI 366 - 6620 8110 0 2 305,1161, 0,329, -,-, 674507 Satellite W-chromosome 585 chrUn_NT_469105v1 9546 10404 GGXHOI 386 - 9546 10404 0 3 290,254,252, 0,335,606, -,-,-, 674511 Satellite W-chromosome 585 chrUn_NT_469108v1 2550 3550 CR1-B2 705 + 2550 3550 0 2 225,772, 0,228, +,+, 674531 LINE CR1 585 chrUn_NT_469108v1 8065 8372 CR1-X 515 + 8065 8372 0 3 170,77,50, 0,170,257, +,+,+, 674537 LINE CR1 585 chrUn_NT_469109v1 8530 9897 GGXHOI 346 + 8530 9897 0 3 149,755,421, 0,174,946, +,+,+, 674542 Satellite W-chromosome 585 chrUn_NT_469110v1 4817 7029 GGXHOI 538 - 4817 7029 0 4 771,350,180,314, 0,1118,1506,1898, -,-,-,-, 674554 Satellite W-chromosome 585 chrUn_NT_469110v1 7109 7716 GGXHOI 558 - 7109 7716 0 2 397,12, 0,595, -,-, 674557 Satellite W-chromosome 585 chrUn_NT_469110v1 8168 10355 GGXHOI 570 - 8168 10355 0 4 1037,229,364,83, 0,1074,1317,2104, -,-,-,-, 674560 Satellite W-chromosome 585 chrUn_NT_469111v1 2040 5358 GGXHOI 544 + 2040 5358 0 6 575,245,192,271,194,17, 0,898,1590,2105,2784,3301, +,+,+,+,+,+, 674566 Satellite W-chromosome 585 chrUn_NT_469111v1 5428 7107 GGXHOI 515 + 5428 7107 0 4 164,259,60,599, 0,549,823,1080, +,+,+,+, 674572 Satellite W-chromosome 585 chrUn_NT_469111v1 7671 8515 GGXHOI 452 + 7671 8515 0 2 189,264, 0,580, +,+, 674578 Satellite W-chromosome 585 chrUn_NT_469111v1 8559 9526 GGXHOI 554 + 8559 9526 0 2 571,74, 0,893, +,+, 674581 Satellite W-chromosome 585 chrUn_NT_469111v1 9877 10368 GGXHOI 546 + 9877 10368 0 2 96,174, 0,317, +,+, 674584 Satellite W-chromosome 585 chrUn_NT_469112v1 1328 1641 (CGAGG)n 502 + 1328 1641 0 2 119,15, 0,298, +,+, 674588 Simple_repeat Simple_repeat 585 chrUn_NT_469112v1 2225 2711 (CGAGG)n 511 + 2225 2711 0 2 287,179, 0,307, +,+, 674592 Simple_repeat Simple_repeat 585 chrUn_NT_469112v1 2982 5767 (CGAGG)n 532 + 2982 5767 0 6 212,54,1019,74,179,803, 0,391,465,1667,1779,1982, +,+,+,+,+,+, 674593 Simple_repeat Simple_repeat 585 chrUn_NT_469112v1 5886 7906 (CGAGG)n 520 + 5886 7906 0 3 1166,405,87, 0,1344,1933, +,+,+, 674597 Simple_repeat Simple_repeat 585 chrUn_NT_469112v1 9923 10330 (CGAGG)n 517 + 9923 10330 0 2 181,189, 0,218, +,+, 674608 Simple_repeat Simple_repeat 585 chrUn_NT_469114v1 4750 7457 GGERVL-B-int 765 - 4750 7457 0 2 2406,301, 0,2406, -,-, 674615 LTR ERVL 585 chrUn_NT_469116v1 1421 1857 GGXHOI 324 + 1421 1857 0 2 136,261, 0,175, +,+, 674623 Satellite W-chromosome 585 chrUn_NT_469116v1 1934 3062 GGXHOI 347 + 1934 3062 0 2 706,398, 0,730, +,+, 674625 Satellite W-chromosome 585 chrUn_NT_469116v1 3268 5036 GGXHOI 356 + 3268 5036 0 2 596,1139, 0,629, +,+, 674626 Satellite W-chromosome 585 chrUn_NT_469116v1 5124 6221 GGXHOI 368 + 5124 6221 0 2 630,427, 0,670, +,+, 674628 Satellite W-chromosome 585 chrUn_NT_469116v1 7116 8858 GGXHOI 336 + 7116 8858 0 3 629,199,447, 0,1078,1295, +,+,+, 674632 Satellite W-chromosome 585 chrUn_NT_469116v1 9295 10389 GGXHOI 338 + 9295 10389 0 3 578,199,248, 0,590,846, +,+,+, 674636 Satellite W-chromosome 585 chrUn_NT_469117v1 2745 3047 (CTCTATGGGG)n 591 - 2745 3047 0 2 120,120, 0,182, -,-, 674638 Satellite Satellite 585 chrUn_NT_469120v1 6436 7040 CR1-H 591 - 6436 7040 0 2 139,465, 0,139, -,-, 674652 LINE CR1 585 chrUn_NT_469120v1 9258 9672 CR1-H 504 - 9258 9672 0 2 163,251, 0,163, -,-, 674655 LINE CR1 585 chrUn_NT_469121v1 2917 7732 GGXHOI 408 - 2917 7732 0 8 967,150,445,399,321,754,986,537, 0,978,1188,1648,2110,2450,3261,4278, -,-,-,-,-,-,-,-, 674657 Satellite W-chromosome 585 chrUn_NT_469121v1 7818 10374 GGXHOI 470 - 7818 10374 0 2 1352,1190, 0,1366, -,-, 674658 Satellite W-chromosome 585 chrUn_NT_469122v1 3366 7329 Sat-CR1_GG 176 - 3366 7329 0 2 828,1660, 0,2303, -,-, 674663 Satellite Satellite 585 chrUn_NT_469122v1 5712 10375 GGXHOI 578 - 5712 10375 0 8 1637,117,206,153,37,25,209,410, 0,1694,2596,3174,3380,3467,3689,4253, -,-,-,-,-,-,-,-, 674665 Satellite W-chromosome 585 chrUn_NT_469124v1 9142 9928 GGXHOI 540 + 9142 9928 0 2 175,354, 0,432, +,+, 674677 Satellite W-chromosome 585 chrUn_NT_469126v1 303 2506 GGERVL-B-int 721 - 303 2506 0 3 238,1357,497, 0,347,1706, -,-,-, 674688 LTR ERVL 585 chrUn_NT_469127v1 4236 4448 A-rich 254 + 4236 4448 0 2 59,96, 0,116, +,+, 674717 Low_complexity Low_complexity 585 chrUn_NT_469129v1 2483 2969 CR1-Y4 606 + 2483 2969 0 2 193,288, 0,198, +,+, 674746 LINE CR1 585 chrUn_NT_469129v1 4303 5088 CR1-F 271 - 4303 5088 0 2 578,207, 0,578, -,-, 674747 LINE CR1 585 chrUn_NT_469130v1 2332 4774 GGLTR7-int 489 + 2332 4774 0 4 255,227,1469,105, 0,255,595,2337, +,+,+,+, 674753 LTR ERV1 585 chrUn_NT_469130v1 7001 10364 GGLTR10D 953 + 7001 10364 0 3 347,2680,336, 0,347,3027, +,+,+, 674755 LTR ERVK 585 chrUn_NT_469132v1 875 3125 GGXHOI 528 - 875 3125 0 2 493,1360, 0,890, -,-, 674761 Satellite W-chromosome 585 chrUn_NT_469132v1 3492 4929 GGXHOI 501 - 3492 4929 0 3 292,471,161, 0,355,1276, -,-,-, 674763 Satellite W-chromosome 585 chrUn_NT_469132v1 5296 8249 GGXHOI 528 - 5296 8249 0 6 319,376,185,373,343,51, 0,511,1199,1695,2360,2902, -,-,-,-,-,-, 674766 Satellite W-chromosome 585 chrUn_NT_469132v1 8476 10365 GGXHOI 549 - 8476 10365 0 6 66,208,77,298,193,35, 0,268,512,815,1436,1854, -,-,-,-,-,-, 674772 Satellite W-chromosome 585 chrUn_NT_469133v1 7982 8125 GA-rich 302 + 7982 8125 0 2 43,66, 0,77, +,+, 674790 Low_complexity Low_complexity 585 chrUn_NT_469135v1 7663 8648 GGXHOI 374 - 7663 8648 0 4 423,155,159,187, 0,437,605,798, -,-,-,-, 674811 Satellite W-chromosome 585 chrUn_NT_469135v1 8722 9958 GGXHOI 475 - 8722 9958 0 2 298,916, 0,320, -,-, 674812 Satellite W-chromosome 585 chrUn_NT_469136v1 1627 2912 GGXHOI 489 - 1627 2912 0 3 211,26,665, 0,283,620, -,-,-, 674817 Satellite W-chromosome 585 chrUn_NT_469136v1 2982 4023 GGXHOI 518 - 2982 4023 0 2 18,731, 0,310, -,-, 674819 Satellite W-chromosome 585 chrUn_NT_469136v1 4093 5112 GGXHOI 484 - 4093 5112 0 2 18,725, 0,294, -,-, 674821 Satellite W-chromosome 585 chrUn_NT_469136v1 5220 6213 GGXHOI 568 - 5220 6213 0 3 75,194,212, 0,277,781, -,-,-, 674823 Satellite W-chromosome 585 chrUn_NT_469136v1 6468 7221 GGXHOI 478 - 6468 7221 0 3 303,20,105, 0,320,648, -,-,-, 674826 Satellite W-chromosome 585 chrUn_NT_469136v1 8195 10363 GGXHOI 518 - 8195 10363 0 4 754,149,247,29, 0,1053,1568,2139, -,-,-,-, 674829 Satellite W-chromosome 585 chrUn_NT_469137v1 4463 5752 GGLTR7-int 309 - 4463 5752 0 2 261,246, 0,1043, -,-, 674834 LTR ERV1 585 chrUn_NT_469137v1 6631 9041 GGERVL-B-int 699 - 6631 9041 0 3 865,1235,310, 0,865,2100, -,-,-, 674837 LTR ERVL 585 chrUn_NT_469138v1 4505 9986 GGXHOI 539 - 4505 9986 0 7 502,405,452,218,1191,279,599, 0,544,1621,2744,2973,4175,4882, -,-,-,-,-,-,-, 674848 Satellite W-chromosome 585 chrUn_NT_469139v1 413 1827 GGXHOI 400 - 413 1827 0 4 206,184,194,669, 0,267,505,745, -,-,-,-, 674854 Satellite W-chromosome 585 chrUn_NT_469139v1 2619 6439 GGXHOI 416 - 2619 6439 0 2 3633,133, 0,3687, -,-, 674856 Satellite W-chromosome 585 chrUn_NT_469139v1 6565 7130 GGXHOI 344 - 6565 7130 0 2 219,327, 0,238, -,-, 674857 Satellite W-chromosome 585 chrUn_NT_469139v1 7290 7974 GGXHOI 396 - 7290 7974 0 3 142,292,174, 0,196,510, -,-,-, 674858 Satellite W-chromosome 585 chrUn_NT_469139v1 9243 10234 GGXHOI 348 - 9243 10234 0 3 262,457,170, 0,312,821, -,-,-, 674861 Satellite W-chromosome 585 chrUn_NT_469140v1 500 2138 (CGAGG)n 542 + 500 2138 0 6 432,183,172,237,82,15, 0,491,728,942,1357,1623, +,+,+,+,+,+, 674864 Simple_repeat Simple_repeat 585 chrUn_NT_469140v1 2215 4260 (CGAGG)n 551 + 2215 4260 0 3 200,1031,599, 0,356,1446, +,+,+, 674868 Simple_repeat Simple_repeat 585 chrUn_NT_469140v1 5708 6501 (CGAGG)n 570 + 5708 6501 0 3 183,175,372, 0,218,421, +,+,+, 674875 Simple_repeat Simple_repeat 585 chrUn_NT_469140v1 6641 9203 (CGAGG)n 535 + 6641 9203 0 5 875,212,121,16,276, 0,912,1303,1927,2286, +,+,+,+,+, 674877 Simple_repeat Simple_repeat 585 chrUn_NT_469140v1 9211 9469 (AGGCG)n 446 + 9211 9469 0 2 80,10, 0,248, +,+, 674881 Simple_repeat Simple_repeat 585 chrUn_NT_469140v1 9469 9975 (CGAGG)n 386 + 9469 9975 0 2 380,111, 0,395, +,+, 674883 Simple_repeat Simple_repeat 585 chrUn_NT_469140v1 10022 10304 (CGAGG)n 463 + 10022 10304 0 2 83,179, 0,103, +,+, 674885 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 102 660 (CGAGG)n 517 + 102 660 0 2 181,347, 0,211, +,+, 674888 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 751 1589 (CGAGG)n 561 + 751 1589 0 3 268,175,349, 0,282,489, +,+,+, 674890 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 1962 3484 (CGAGG)n 550 + 1962 3484 0 3 523,528,439, 0,535,1083, +,+,+, 674894 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 4433 5737 (CGAGG)n 521 + 4433 5737 0 4 253,390,75,358, 0,282,842,946, +,+,+,+, 674899 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 5866 6286 (CGAGG)n 503 + 5866 6286 0 2 178,184, 0,236, +,+, 674903 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 7826 8557 (CGAGG)n 518 + 7826 8557 0 2 177,552, 0,179, +,+, 674911 Simple_repeat Simple_repeat 585 chrUn_NT_469141v1 9106 9572 (CGAGG)n 497 + 9106 9572 0 3 16,177,238, 0,34,228, +,+,+, 674917 Simple_repeat Simple_repeat 585 chrUn_NT_469147v1 1565 4021 GGLTR7-int 311 + 1565 4021 0 3 402,1209,804, 0,435,1652, +,+,+, 674975 LTR ERV1 585 chrUn_NT_469147v1 4201 6428 GGLTR10D-int 901 - 4201 6428 0 2 364,1860, 0,367, -,-, 674978 LTR ERVK 585 chrUn_NT_469147v1 6467 8791 (CGAGG)n 554 + 6467 8791 0 9 171,170,185,285,45,180,224,357,191, 0,212,538,731,1193,1253,1457,1718,2133, +,+,+,+,+,+,+,+,+, 674980 Simple_repeat Simple_repeat 585 chrUn_NT_469147v1 9743 10113 (CGAGG)n 546 + 9743 10113 0 2 177,178, 0,192, +,+, 674988 Simple_repeat Simple_repeat 585 chrUn_NT_469149v1 3781 4616 GGXHOI 374 - 3781 4616 0 2 132,690, 0,145, -,-, 675002 Satellite W-chromosome 585 chrUn_NT_469149v1 5263 10350 GGXHOI 404 - 5263 10350 0 4 2858,465,1135,503, 0,2900,3423,4584, -,-,-,-, 675004 Satellite W-chromosome 585 chrUn_NT_469150v1 3793 10304 GGXHOI 363 - 3793 10304 0 5 536,1931,2956,737,256, 0,554,2505,5496,6255, -,-,-,-,-, 675006 Satellite W-chromosome 585 chrUn_NT_469151v1 1078 2168 GGXHOI 389 - 1078 2168 0 2 519,552, 0,538, -,-, 675008 Satellite W-chromosome 585 chrUn_NT_469151v1 2278 4582 GGXHOI 357 - 2278 4582 0 6 338,891,218,396,146,184, 0,392,1297,1531,1954,2120, -,-,-,-,-,-, 675009 Satellite W-chromosome 585 chrUn_NT_469151v1 4737 10349 GGXHOI 374 - 4737 10349 0 5 2163,1100,722,625,927, 0,2175,3298,4038,4685, -,-,-,-,-, 675010 Satellite W-chromosome 585 chrUn_NT_469152v1 208 3601 GGXHOI 403 - 208 3601 0 9 188,159,464,444,227,910,298,358,134, 0,248,454,938,1399,1638,2576,2887,3259, -,-,-,-,-,-,-,-,-, 675012 Satellite W-chromosome 585 chrUn_NT_469152v1 3771 4575 GGXHOI 437 - 3771 4575 0 3 142,239,371, 0,160,433, -,-,-, 675013 Satellite W-chromosome 585 chrUn_NT_469152v1 4656 5742 GGXHOI 371 - 4656 5742 0 4 378,110,372,133, 0,395,567,953, -,-,-,-, 675014 Satellite W-chromosome 585 chrUn_NT_469152v1 5848 9057 GGXHOI 341 - 5848 9057 0 14 130,122,395,134,136,390,261,151,136,135,139,277,211,124, 0,168,301,741,919,1099,1503,1801,2003,2150,2331,2526,2860,3085, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 675015 Satellite W-chromosome 585 chrUn_NT_469152v1 9175 10084 GGXHOI 379 - 9175 10084 0 3 297,161,362, 0,339,547, -,-,-, 675016 Satellite W-chromosome 585 chrUn_NT_469154v1 3529 10348 Z-REP 851 + 3529 10348 0 3 154,5759,125, 0,914,6694, +,+,+, 675025 Satellite macro 585 chrUn_NT_469155v1 1123 2520 GGXHOI 375 + 1123 2520 0 2 1081,305, 0,1092, +,+, 675028 Satellite W-chromosome 585 chrUn_NT_469155v1 2692 3818 GGXHOI 368 + 2692 3818 0 2 552,512, 0,614, +,+, 675029 Satellite W-chromosome 585 chrUn_NT_469155v1 5133 5994 (CAAGG)n 493 + 5133 5994 0 3 351,214,199, 0,413,662, +,+,+, 675032 Simple_repeat Simple_repeat 585 chrUn_NT_469155v1 6165 6949 (CCTTG)n 499 + 6165 6949 0 3 376,168,181, 0,390,603, +,+,+, 675034 Simple_repeat Simple_repeat 585 chrUn_NT_469155v1 7402 8251 (CAAGG)n 476 + 7402 8251 0 3 171,429,184, 0,212,665, +,+,+, 675035 Simple_repeat Simple_repeat 585 chrUn_NT_469155v1 8344 8608 (CCTTG)n 452 + 8344 8608 0 2 177,25, 0,239, +,+, 675036 Simple_repeat Simple_repeat 585 chrUn_NT_469155v1 8661 9310 (CCTTG)n 484 + 8661 9310 0 2 388,55, 0,594, +,+, 675038 Simple_repeat Simple_repeat 585 chrUn_NT_469156v1 9282 10346 CR1-B2 658 - 9282 10346 0 2 889,172, 0,892, -,-, 675051 LINE CR1 585 chrUn_NT_469157v1 1402 3156 GGXHOI 368 - 1402 3156 0 2 865,853, 0,901, -,-, 675053 Satellite W-chromosome 585 chrUn_NT_469157v1 3586 4938 GGXHOI 390 - 3586 4938 0 5 181,205,406,226,262, 0,198,415,843,1090, -,-,-,-,-, 675055 Satellite W-chromosome 585 chrUn_NT_469157v1 5002 7801 GGXHOI 387 - 5002 7801 0 6 266,751,247,297,871,228, 0,283,1058,1326,1686,2571, -,-,-,-,-,-, 675056 Satellite W-chromosome 585 chrUn_NT_469157v1 8834 10314 GGXHOI 372 - 8834 10314 0 2 362,1103, 0,377, -,-, 675059 Satellite W-chromosome 585 chrUn_NT_469158v1 2249 2853 CR1-H 661 - 2249 2853 0 2 138,460, 0,144, -,-, 675061 LINE CR1 585 chrUn_NT_469158v1 5667 6123 CR1-H 561 - 5667 6123 0 2 159,297, 0,159, -,-, 675065 LINE CR1 585 chrUn_NT_469161v1 535 4748 GGXHOI 327 - 535 4748 0 6 151,181,1388,877,1049,432, 0,166,408,1819,2716,3781, -,-,-,-,-,-, 675094 Satellite W-chromosome 585 chrUn_NT_469161v1 4830 10312 GGXHOI 355 - 4830 10312 0 3 495,3384,1566, 0,512,3916, -,-,-, 675095 Satellite W-chromosome 585 chrUn_NT_469162v1 4711 5441 GGXHOI 284 - 4711 5441 0 2 206,481, 0,249, -,-, 675097 Satellite W-chromosome 585 chrUn_NT_469162v1 5729 9223 GGXHOI 357 - 5729 9223 0 4 1550,295,1434,132, 0,1570,1896,3362, -,-,-,-, 675098 Satellite W-chromosome 585 chrUn_NT_469163v1 4647 4980 (ACCCATAGGG)n 480 - 4647 4980 0 2 157,136, 0,197, -,-, 675103 Satellite Satellite 585 chrUn_NT_469163v1 5462 5908 (ACCCATAGGG)n 371 - 5462 5908 0 3 28,219,132, 0,76,314, -,-,-, 675107 Satellite Satellite 585 chrUn_NT_469163v1 5931 6199 (TATGGGCCC)n 795 + 5931 6199 0 3 54,54,54, 0,97,214, +,+,+, 675109 Simple_repeat Simple_repeat 585 chrUn_NT_469163v1 6564 7383 (ACCCATAGGG)n 511 - 6564 7383 0 3 112,530,106, 0,143,713, -,-,-, 675113 Satellite Satellite 585 chrUn_NT_469163v1 7735 7963 (ACCCATAGGG)n 519 - 7735 7963 0 2 57,130, 0,98, -,-, 675117 Satellite Satellite 585 chrUn_NT_469163v1 8154 8503 (ACCCATAGGG)n 458 - 8154 8503 0 2 156,30, 0,319, -,-, 675119 Satellite Satellite 585 chrUn_NT_469163v1 9089 9784 (ACCCATAGGG)n 503 - 9089 9784 0 4 119,106,97,123, 0,240,454,572, -,-,-,-, 675125 Satellite Satellite 585 chrUn_NT_469163v1 9920 10344 (ACCCATAGGG)n 422 - 9920 10344 0 3 125,117,124, 0,153,300, -,-,-, 675128 Satellite Satellite 585 chrUn_NT_469164v1 4463 6270 GGXHOI 363 - 4463 6270 0 2 1317,470, 0,1337, -,-, 675132 Satellite W-chromosome 585 chrUn_NT_469164v1 6369 8568 GGXHOI 381 - 6369 8568 0 3 516,1085,472, 0,579,1727, -,-,-, 675133 Satellite W-chromosome 585 chrUn_NT_469165v1 2711 3080 GGERVK10-int 263 + 2711 3080 0 2 140,86, 0,283, +,+, 675138 LTR ERVK 585 chrUn_NT_469166v1 8030 8682 CR1-F 663 + 8030 8682 0 3 175,190,200, 0,220,452, +,+,+, 675155 LINE CR1 585 chrUn_NT_469166v1 8981 10325 CR1-F 508 + 8981 10325 0 5 201,195,179,136,202, 0,243,730,953,1142, +,+,+,+,+, 675157 LINE CR1 585 chrUn_NT_469168v1 6819 7954 GGXHOI 386 - 6819 7954 0 2 641,440, 0,695, -,-, 675168 Satellite W-chromosome 585 chrUn_NT_469169v1 4066 4688 CR1-H 384 - 4066 4688 0 2 378,208, 0,414, -,-, 675172 LINE CR1 585 chrUn_NT_469169v1 6570 7193 CR1-H 388 - 6570 7193 0 2 379,208, 0,415, -,-, 675175 LINE CR1 585 chrUn_NT_469169v1 9072 9684 CR1-H 354 - 9072 9684 0 2 373,203, 0,409, -,-, 675178 LINE CR1 585 chrUn_NT_469170v1 456 838 (CGAGG)n 450 + 456 838 0 2 188,175, 0,207, +,+, 675181 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 903 1448 (CGAGG)n 527 + 903 1448 0 2 358,175, 0,370, +,+, 675183 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 1641 2538 (CGAGG)n 518 + 1641 2538 0 2 353,499, 0,398, +,+, 675185 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 2562 3097 (CGAGG)n 578 + 2562 3097 0 2 146,211, 0,324, +,+, 675187 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 3564 4511 (CGAGG)n 501 + 3564 4511 0 3 178,460,266, 0,209,681, +,+,+, 675192 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 5789 6769 (CGAGG)n 491 + 5789 6769 0 3 368,22,383, 0,550,597, +,+,+, 675199 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 8174 9667 (CGAGG)n 520 + 8174 9667 0 2 174,1258, 0,235, +,+, 675207 Simple_repeat Simple_repeat 585 chrUn_NT_469170v1 9670 10125 (GGCGA)n 366 + 9670 10125 0 2 198,216, 0,239, +,+, 675208 Simple_repeat Simple_repeat 585 chrUn_NT_469173v1 1221 2065 (CCTCG)n 493 + 1221 2065 0 2 309,478, 0,366, +,+, 675227 Simple_repeat Simple_repeat 585 chrUn_NT_469173v1 2103 4311 GGLTR10D-int 903 + 2103 4311 0 2 1840,362, 0,1846, +,+, 675229 LTR ERVK 585 chrUn_NT_469173v1 4484 6918 GGLTR7-int 540 - 4484 6918 0 2 780,337, 0,2097, -,-, 675230 LTR ERV1 585 chrUn_NT_469175v1 1532 1989 CR1-H 670 - 1532 1989 0 2 163,294, 0,163, -,-, 675242 LINE CR1 585 chrUn_NT_469177v1 5544 8665 GGLTR7-int 413 + 5544 8665 0 4 116,1639,947,277, 0,116,1850,2844, +,+,+,+, 675260 LTR ERV1 585 chrUn_NT_469179v1 808 1168 (ACCCATAGAG)n 712 + 808 1168 0 3 86,11,21, 0,209,339, +,+,+, 675271 Satellite Satellite 585 chrUn_NT_469179v1 1273 1649 (CTCTATGGGG)n 726 + 1273 1649 0 2 115,51, 0,325, +,+, 675274 Satellite Satellite 585 chrUn_NT_469179v1 1771 2133 (ACCCATAGAG)n 702 + 1771 2133 0 3 86,11,21, 0,209,341, +,+,+, 675278 Satellite Satellite 585 chrUn_NT_469179v1 4800 5528 (ACCCATAGGG)n 746 - 4800 5528 0 3 171,42,23, 0,546,705, -,-,-, 675285 Satellite Satellite 585 chrUn_NT_469179v1 6605 6843 (ACCCATAGAG)n 628 + 6605 6843 0 2 103,11, 0,227, +,+, 675293 Satellite Satellite 585 chrUn_NT_469179v1 6708 7083 (ACCCATAGGG)n 617 - 6708 7083 0 3 124,96,33, 0,124,342, -,-,-, 675294 Satellite Satellite 585 chrUn_NT_469179v1 8163 8612 (ACCCCATAGGG)n 615 - 8163 8612 0 2 120,284, 0,165, -,-, 675301 Satellite Satellite 585 chrUn_NT_469179v1 8803 9286 (ACCCCATAGGG)n 628 - 8803 9286 0 2 252,107, 0,376, -,-, 675303 Satellite Satellite 585 chrUn_NT_469180v1 661 5557 GGXHOI 532 - 661 5557 0 8 335,193,309,194,362,247,194,128, 0,659,1193,1824,2339,3618,4182,4768, -,-,-,-,-,-,-,-, 675310 Satellite W-chromosome 585 chrUn_NT_469180v1 5640 6323 GGXHOI 437 - 5640 6323 0 2 362,267, 0,416, -,-, 675318 Satellite W-chromosome 585 chrUn_NT_469180v1 6399 7554 GGXHOI 469 - 6399 7554 0 2 461,638, 0,517, -,-, 675319 Satellite W-chromosome 585 chrUn_NT_469180v1 7622 10315 GGXHOI 522 - 7622 10315 0 5 542,248,193,247,57, 0,979,1550,2191,2636, -,-,-,-,-, 675320 Satellite W-chromosome 585 chrUn_NT_469181v1 5129 6140 GGXHOI 433 + 5129 6140 0 2 95,882, 0,129, +,+, 675326 Satellite W-chromosome 585 chrUn_NT_469181v1 6360 10291 GGXHOI 427 + 6360 10291 0 4 1219,170,236,2231, 0,1263,1448,1700, +,+,+,+, 675327 Satellite W-chromosome 585 chrUn_NT_469183v1 3076 7131 GGXHOI 573 - 3076 7131 0 8 1618,403,18,158,408,254,66,139, 0,1662,2413,2494,2695,3354,3651,3916, -,-,-,-,-,-,-,-, 675347 Satellite W-chromosome 585 chrUn_NT_469183v1 7418 9112 GGXHOI 570 - 7418 9112 0 2 534,908, 0,786, -,-, 675352 Satellite W-chromosome 585 chrUn_NT_469183v1 9891 10313 GGXHOI 592 - 9891 10313 0 2 147,261, 0,161, -,-, 675357 Satellite W-chromosome 585 chrUn_NT_469184v1 404 1361 Sat-CR1_GG 174 + 404 1361 0 2 23,431, 0,526, +,+, 675359 Satellite Satellite 585 chrUn_NT_469184v1 944 3193 GGXHOI 560 + 944 3193 0 3 97,351,161, 0,415,2088, +,+,+, 675361 Satellite W-chromosome 585 chrUn_NT_469184v1 3264 8040 GGXHOI 594 + 3264 8040 0 2 84,164, 0,4612, +,+, 675363 Satellite W-chromosome 585 chrUn_NT_469184v1 8069 10258 GGXHOI 548 + 8069 10258 0 4 29,37,158,796, 0,77,1193,1393, +,+,+,+, 675366 Satellite W-chromosome 585 chrUn_NT_469185v1 4344 4757 (GGATG)n 714 + 4344 4757 0 2 223,178, 0,235, +,+, 675373 Simple_repeat Simple_repeat 585 chrUn_NT_469185v1 5790 5852 (TCCCCT)n 420 + 5790 5852 0 2 15,20, 0,42, +,+, 675380 Simple_repeat Simple_repeat 585 chrUn_NT_469187v1 9201 9752 CR1-H 483 - 9201 9752 0 2 134,407, 0,144, -,-, 675400 LINE CR1 585 chrUn_NT_469188v1 2452 10301 GGXHOI 388 - 2452 10301 0 6 302,1011,1973,1945,2225,277, 0,321,1351,3343,5320,7572, -,-,-,-,-,-, 675403 Satellite W-chromosome 585 chrUn_NT_469189v1 2787 3909 GGXHOI 360 - 2787 3909 0 2 516,552, 0,570, -,-, 675409 Satellite W-chromosome 585 chrUn_NT_469189v1 5425 6046 (CCTTG)n 477 + 5425 6046 0 3 188,76,154, 0,374,467, +,+,+, 675413 Simple_repeat Simple_repeat 585 chrUn_NT_469189v1 6410 6822 (CAAGG)n 547 + 6410 6822 0 3 44,32,178, 0,189,234, +,+,+, 675416 Simple_repeat Simple_repeat 585 chrUn_NT_469189v1 7203 7942 (CAAGG)n 500 + 7203 7942 0 2 229,403, 0,336, +,+, 675421 Simple_repeat Simple_repeat 585 chrUn_NT_469189v1 8123 8669 (CCTTG)n 534 + 8123 8669 0 2 226,294, 0,252, +,+, 675424 Simple_repeat Simple_repeat 585 chrUn_NT_469189v1 9200 9699 (CAAGG)n 489 + 9200 9699 0 2 231,242, 0,257, +,+, 675429 Simple_repeat Simple_repeat 585 chrUn_NT_469189v1 9775 10102 (CAAGG)n 430 + 9775 10102 0 2 75,225, 0,102, +,+, 675430 Simple_repeat Simple_repeat 585 chrUn_NT_469190v1 648 1782 GGXHOI 351 - 648 1782 0 2 139,934, 0,200, -,-, 675433 Satellite W-chromosome 585 chrUn_NT_469190v1 1857 10297 GGXHOI 396 - 1857 10297 0 2 1734,6668, 0,1772, -,-, 675434 Satellite W-chromosome 585 chrUn_NT_469191v1 6494 6910 (CTCTATGGGG)n 563 + 6494 6910 0 2 130,272, 0,144, +,+, 675446 Satellite Satellite 585 chrUn_NT_469191v1 7310 7723 (CTCTATGGGG)n 661 - 7310 7723 0 3 110,109,123, 0,145,290, -,-,-, 675450 Satellite Satellite 585 chrUn_NT_469191v1 8674 8940 (CTCTATGGGG)n 677 - 8674 8940 0 2 122,109, 0,157, -,-, 675457 Satellite Satellite 585 chrUn_NT_469191v1 8996 9224 (GCCCCATAGA)n 695 + 8996 9224 0 2 92,73, 0,155, +,+, 675458 Simple_repeat Simple_repeat 585 chrUn_NT_469193v1 9655 10274 GGXHOI 586 + 9655 10274 0 2 277,144, 0,475, +,+, 675490 Satellite W-chromosome 585 chrUn_NT_469194v1 4899 7525 GGXHOI 481 - 4899 7525 0 5 153,440,669,1097,167, 0,167,663,1347,2459, -,-,-,-,-, 675493 Satellite W-chromosome 585 chrUn_NT_469194v1 7654 10089 GGXHOI 456 - 7654 10089 0 4 770,618,445,556, 0,785,1418,1879, -,-,-,-, 675494 Satellite W-chromosome 585 chrUn_NT_469196v1 1419 4016 GGXHOI 372 + 1419 4016 0 5 996,425,102,417,516, 0,1017,1477,1601,2081, +,+,+,+,+, 675502 Satellite W-chromosome 585 chrUn_NT_469196v1 4200 5446 GGXHOI 385 + 4200 5446 0 2 305,920, 0,326, +,+, 675503 Satellite W-chromosome 585 chrUn_NT_469196v1 6937 7991 GGXHOI 381 + 6937 7991 0 2 475,517, 0,537, +,+, 675507 Satellite W-chromosome 585 chrUn_NT_469197v1 4740 5866 CR1-B2 690 + 4740 5866 0 2 225,898, 0,228, +,+, 675515 LINE CR1 585 chrUn_NT_469198v1 4753 7664 GGXHOI 393 - 4753 7664 0 3 1666,851,344, 0,1698,2567, -,-,-, 675523 Satellite W-chromosome 585 chrUn_NT_469198v1 7898 10280 GGXHOI 380 - 7898 10280 0 2 515,1845, 0,537, -,-, 675524 Satellite W-chromosome 585 chrUn_NT_469199v1 537 950 GGLTR3F1 732 + 537 950 0 2 82,294, 0,119, +,+, 675526 LTR ERVL 585 chrUn_NT_469200v1 412 1946 GGXHOI 559 - 412 1946 0 2 974,536, 0,998, -,-, 675532 Satellite W-chromosome 585 chrUn_NT_469200v1 2011 5009 GGXHOI 518 - 2011 5009 0 2 2412,306, 0,2692, -,-, 675533 Satellite W-chromosome 585 chrUn_NT_469200v1 5084 6327 GGXHOI 489 - 5084 6327 0 2 253,935, 0,308, -,-, 675535 Satellite W-chromosome 585 chrUn_NT_469200v1 8683 10278 GGXHOI 541 - 8683 10278 0 2 1011,544, 0,1051, -,-, 675538 Satellite W-chromosome 585 chrUn_NT_469201v1 2404 2709 CR1-X 497 + 2404 2709 0 3 168,77,50, 0,168,255, +,+,+, 675542 LINE CR1 585 chrUn_NT_469202v1 1426 1567 (GAAAGAACG)n 901 + 1426 1567 0 2 44,39, 0,102, +,+, 675552 Simple_repeat Simple_repeat 585 chrUn_NT_469203v1 8581 9109 A-rich 574 + 8581 9109 0 2 455,38, 0,490, +,+, 675607 Low_complexity Low_complexity 585 chrUn_NT_469206v1 568 1654 (CAGTA)n 360 + 568 1654 0 4 315,328,178,176, 0,340,680,910, +,+,+,+, 675626 Simple_repeat Simple_repeat 585 chrUn_NT_469206v1 3834 4106 (ACCCATAGGG)n 369 + 3834 4106 0 2 112,113, 0,159, +,+, 675628 Satellite Satellite 585 chrUn_NT_469206v1 7943 8181 (GCCCCACAGCT)n 539 - 7943 8181 0 2 104,73, 0,165, -,-, 675632 Satellite Satellite 585 chrUn_NT_469207v1 2476 10258 GGXHOI 411 - 2476 10258 0 10 472,1000,995,1051,435,99,948,1495,145,968, 0,492,1511,2526,3590,4048,4162,5127,6658,6814, -,-,-,-,-,-,-,-,-,-, 675637 Satellite W-chromosome 585 chrUn_NT_469208v1 1277 5605 GGLTR7A 817 - 1277 5605 0 2 606,3721, 0,607, -,-, 675643 LTR ERV1 585 chrUn_NT_469208v1 7314 9783 Z-REP 722 + 7314 9783 0 2 157,1551, 0,918, +,+, 675646 Satellite macro 585 chrUn_NT_469209v1 2473 3478 GGXHOI 358 + 2473 3478 0 2 401,587, 0,418, +,+, 675651 Satellite W-chromosome 585 chrUn_NT_469209v1 6343 7800 GGXHOI 384 + 6343 7800 0 2 385,1009, 0,448, +,+, 675656 Satellite W-chromosome 585 chrUn_NT_469209v1 8552 10088 GGXHOI 378 + 8552 10088 0 2 471,1004, 0,532, +,+, 675658 Satellite W-chromosome 585 chrUn_NT_469211v1 174 770 (ACCCCATAGGG)n 393 + 174 770 0 3 98,173,148, 0,226,448, +,+,+, 675667 Satellite Satellite 585 chrUn_NT_469211v1 7377 7632 (ACCCCATAGGG)n 344 + 7377 7632 0 2 108,22, 0,233, +,+, 675690 Satellite Satellite 585 chrUn_NT_469211v1 8861 9339 (GCCCCACAGCT)n 747 + 8861 9339 0 3 116,74,147, 0,136,331, +,+,+, 675693 Satellite Satellite 585 chrUn_NT_469212v1 417 1607 (CCCTAA)n 663 + 417 1607 0 3 500,457,174, 0,522,1016, +,+,+, 675700 Simple_repeat Simple_repeat 585 chrUn_NT_469212v1 2013 10249 GGXHOI 421 + 2013 10249 0 10 1669,281,192,526,1310,807,444,1719,437,729, 0,1683,1976,2180,2717,4045,4866,5322,7059,7507, +,+,+,+,+,+,+,+,+,+, 675702 Satellite W-chromosome 585 chrUn_NT_469213v1 1206 8892 GGXHOI 412 - 1206 8892 0 10 647,719,233,1067,145,2309,148,948,912,408, 0,667,1397,1650,2730,2890,5219,5381,6346,7278, -,-,-,-,-,-,-,-,-,-, 675704 Satellite W-chromosome 585 chrUn_NT_469213v1 9058 10272 GGXHOI 398 - 9058 10272 0 2 638,563, 0,651, -,-, 675705 Satellite W-chromosome 585 chrUn_NT_469214v1 1383 2052 GGXHOI 274 - 1383 2052 0 2 169,484, 0,185, -,-, 675708 Satellite W-chromosome 585 chrUn_NT_469215v1 4590 5982 GGXHOI 376 - 4590 5982 0 2 821,513, 0,879, -,-, 675724 Satellite W-chromosome 585 chrUn_NT_469220v1 492 895 (CGAGG)n 587 + 492 895 0 2 176,185, 0,218, +,+, 675753 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 1010 1753 (CGAGG)n 584 + 1010 1753 0 2 480,80, 0,663, +,+, 675755 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 1835 2677 (CGAGG)n 610 + 1835 2677 0 4 177,221,213,196, 0,212,433,646, +,+,+,+, 675758 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 2742 3221 (CGAGG)n 566 + 2742 3221 0 2 205,272, 0,207, +,+, 675759 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 3242 4066 (CGAGG)n 578 + 3242 4066 0 3 180,216,242, 0,180,582, +,+,+, 675761 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 4133 6183 (CGAGG)n 591 + 4133 6183 0 4 174,646,719,154, 0,186,871,1896, +,+,+,+, 675763 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 6228 6929 (CGAGG)n 597 + 6228 6929 0 4 120,21,39,241, 0,220,421,460, +,+,+,+, 675766 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 6977 8215 (CGAGG)n 558 + 6977 8215 0 3 175,180,810, 0,202,428, +,+,+, 675770 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 8675 9398 (CGAGG)n 584 + 8675 9398 0 2 386,195, 0,528, +,+, 675774 Simple_repeat Simple_repeat 585 chrUn_NT_469220v1 9418 10240 (CGAGG)n 585 + 9418 10240 0 4 181,90,201,184, 0,181,416,638, +,+,+,+, 675777 Simple_repeat Simple_repeat 585 chrUn_NT_469221v1 3340 10258 GGXHOI 405 - 3340 10258 0 3 1697,1578,3619, 0,1709,3299, -,-,-, 675781 Satellite W-chromosome 585 chrUn_NT_469223v1 1002 9735 GGXHOI 383 + 1002 9735 0 7 102,1768,290,4845,916,353,267, 0,152,1964,2267,7130,8095,8466, +,+,+,+,+,+,+, 675794 Satellite W-chromosome 585 chrUn_NT_469224v1 911 1717 (CTCTATGGGG)n 319 - 911 1717 0 3 143,429,138, 0,205,668, -,-,-, 675797 Satellite Satellite 585 chrUn_NT_469224v1 7586 7853 (CTCTATGGGG)n 662 + 7586 7853 0 2 117,119, 0,148, +,+, 675799 Satellite Satellite 585 chrUn_NT_469224v1 7833 8271 (CTCTATGGGG)n 696 - 7833 8271 0 2 170,248, 0,190, -,-, 675800 Satellite Satellite 585 chrUn_NT_469224v1 8313 8605 (CTCTATGGGG)n 738 + 8313 8605 0 2 107,69, 0,223, +,+, 675802 Satellite Satellite 585 chrUn_NT_469224v1 8814 9061 (CTCTATGGGG)n 612 + 8814 9061 0 2 98,30, 0,217, +,+, 675806 Satellite Satellite 585 chrUn_NT_469224v1 9140 9515 (CTCTATGGGG)n 734 + 9140 9515 0 2 119,237, 0,138, +,+, 675808 Satellite Satellite 585 chrUn_NT_469224v1 9644 10190 (CTCTATGGGG)n 638 + 9644 10190 0 2 186,124, 0,422, +,+, 675810 Satellite Satellite 585 chrUn_NT_469225v1 4470 6467 GGXHOI 407 - 4470 6467 0 3 362,1441,162, 0,377,1835, -,-,-, 675814 Satellite W-chromosome 585 chrUn_NT_469225v1 6596 8859 GGXHOI 429 - 6596 8859 0 5 81,147,923,589,373, 0,97,260,1243,1890, -,-,-,-,-, 675815 Satellite W-chromosome 585 chrUn_NT_469225v1 8929 9583 GGXHOI 437 - 8929 9583 0 2 477,160, 0,494, -,-, 675816 Satellite W-chromosome 585 chrUn_NT_469225v1 9688 10254 GGXHOI 391 - 9688 10254 0 2 166,385, 0,181, -,-, 675817 Satellite W-chromosome 585 chrUn_NT_469226v1 4230 5895 GGXHOI 386 + 4230 5895 0 2 1088,514, 0,1151, +,+, 675825 Satellite W-chromosome 585 chrUn_NT_469226v1 5994 7045 GGXHOI 392 + 5994 7045 0 2 472,516, 0,535, +,+, 675826 Satellite W-chromosome 585 chrUn_NT_469229v1 7147 8862 CR1-G 501 + 7147 8862 0 3 599,150,386, 0,862,1329, +,+,+, 675841 LINE CR1 585 chrUn_NT_469229v1 8873 9892 CR1-Y1_Aves 217 - 8873 9892 0 2 324,283, 0,736, -,-, 675843 LINE CR1 585 chrUn_NT_469230v1 2799 3810 ENS3-int 772 + 2799 3810 0 2 80,931, 0,80, +,+, 675847 LTR ERVL 585 chrUn_NT_469230v1 9818 10243 GGLTR7-int 805 - 9818 10243 0 3 111,266,35, 0,111,390, -,-,-, 675853 LTR ERV1 585 chrUn_NT_469231v1 617 3975 GGLTR7-int 432 - 617 3975 0 5 169,662,165,1601,103, 0,220,927,1188,3255, -,-,-,-,-, 675855 LTR ERV1 585 chrUn_NT_469232v1 1795 5412 GGXHOI 350 + 1795 5412 0 5 877,435,712,1007,429, 0,938,1431,2164,3188, +,+,+,+,+, 675865 Satellite W-chromosome 585 chrUn_NT_469232v1 8749 9244 GGXHOI 312 + 8749 9244 0 2 215,264, 0,231, +,+, 675870 Satellite W-chromosome 585 chrUn_NT_469234v1 547 818 (CGAGG)n 529 + 547 818 0 2 49,177, 0,94, +,+, 675881 Simple_repeat Simple_repeat 585 chrUn_NT_469234v1 1742 2190 (CGAGG)n 575 + 1742 2190 0 2 210,180, 0,268, +,+, 675884 Simple_repeat Simple_repeat 585 chrUn_NT_469234v1 3537 4032 (CGAGG)n 541 + 3537 4032 0 2 180,286, 0,209, +,+, 675892 Simple_repeat Simple_repeat 585 chrUn_NT_469234v1 4946 5303 (CGAGG)n 416 + 4946 5303 0 2 138,30, 0,327, +,+, 675900 Simple_repeat Simple_repeat 585 chrUn_NT_469234v1 5382 7866 (CGAGG)n 531 + 5382 7866 0 6 171,656,185,471,178,707, 0,183,874,1080,1585,1777, +,+,+,+,+,+, 675903 Simple_repeat Simple_repeat 585 chrUn_NT_469234v1 8374 8927 (CGAGG)n 520 + 8374 8927 0 2 179,374, 0,179, +,+, 675907 Simple_repeat Simple_repeat 585 chrUn_NT_469234v1 9115 10086 (CGAGG)n 519 + 9115 10086 0 3 261,333,303, 0,282,668, +,+,+, 675909 Simple_repeat Simple_repeat 585 chrUn_NT_469235v1 798 1421 CR1-H 377 + 798 1421 0 2 209,378, 0,245, +,+, 675912 LINE CR1 585 chrUn_NT_469235v1 3292 3882 CR1-H 363 + 3292 3882 0 2 180,374, 0,216, +,+, 675915 LINE CR1 585 chrUn_NT_469235v1 5505 6130 CR1-H 371 + 5505 6130 0 2 209,380, 0,245, +,+, 675918 LINE CR1 585 chrUn_NT_469235v1 8009 8632 CR1-H 371 + 8009 8632 0 2 210,377, 0,246, +,+, 675921 LINE CR1 585 chrUn_NT_469236v1 6260 6358 (TTGCT)n 372 + 6260 6358 0 2 26,22, 0,76, +,+, 675933 Simple_repeat Simple_repeat 585 chrUn_NT_469237v1 9549 9920 (TTAGGG)n 503 + 9549 9920 0 2 166,190, 0,181, +,+, 675940 Simple_repeat Simple_repeat 585 chrUn_NT_469238v1 693 8519 GGXHOI 563 - 693 8519 0 7 1383,283,107,924,51,125,1791, 0,1404,3352,3507,5059,5886,6035, -,-,-,-,-,-,-, 675945 Satellite W-chromosome 585 chrUn_NT_469238v1 6850 9599 Sat-CR1_GG 178 - 6850 9599 0 3 1693,32,43, 0,2517,2706, -,-,-, 675949 Satellite Satellite 585 chrUn_NT_469241v1 7485 9634 (CCATATC)n 388 + 7485 9634 0 2 1880,240, 0,1909, +,+, 676014 Simple_repeat Simple_repeat 585 chrUn_NT_469242v1 4132 6762 GGXHOI 445 + 4132 6762 0 3 1571,796,231, 0,1588,2399, +,+,+, 676017 Satellite W-chromosome 585 chrUn_NT_469242v1 6908 9072 GGXHOI 382 + 6908 9072 0 2 217,1900, 0,264, +,+, 676018 Satellite W-chromosome 585 chrUn_NT_469242v1 9238 10217 GGXHOI 343 + 9238 10217 0 3 80,166,695, 0,105,284, +,+,+, 676019 Satellite W-chromosome 585 chrUn_NT_469243v1 6694 8932 (CCCTAA)n 569 + 6694 8932 0 8 176,188,172,248,78,35,491,235, 0,236,439,640,1193,1450,1512,2003, +,+,+,+,+,+,+,+, 676022 Simple_repeat Simple_repeat 585 chrUn_NT_469243v1 9303 9594 (TTAGGG)n 553 + 9303 9594 0 2 100,178, 0,113, +,+, 676029 Simple_repeat Simple_repeat 585 chrUn_NT_469244v1 1965 4592 GGXHOI 326 - 1965 4592 0 3 1009,1256,290, 0,1030,2337, -,-,-, 676035 Satellite W-chromosome 585 chrUn_NT_469245v1 1498 3029 (CGAGG)n 520 + 1498 3029 0 3 183,575,716, 0,213,815, +,+,+, 676044 Simple_repeat Simple_repeat 585 chrUn_NT_469245v1 4028 6551 (CGAGG)n 528 + 4028 6551 0 6 41,740,208,293,495,474, 0,54,828,1215,1528,2049, +,+,+,+,+,+, 676047 Simple_repeat Simple_repeat 585 chrUn_NT_469245v1 7403 7830 (CGAGG)n 494 + 7403 7830 0 2 121,131, 0,296, +,+, 676052 Simple_repeat Simple_repeat 585 chrUn_NT_469245v1 8332 8858 (CGAGG)n 489 + 8332 8858 0 2 331,183, 0,343, +,+, 676057 Simple_repeat Simple_repeat 585 chrUn_NT_469246v1 168 558 (CCTCG)n 518 + 168 558 0 2 178,187, 0,203, +,+, 676063 Simple_repeat Simple_repeat 585 chrUn_NT_469246v1 1053 1446 (CCTCG)n 482 + 1053 1446 0 2 184,179, 0,214, +,+, 676066 Simple_repeat Simple_repeat 585 chrUn_NT_469246v1 1649 3957 GGERV10_LTR 802 + 1649 3957 0 2 43,38, 0,2270, +,+, 676069 LTR ERVL 585 chrUn_NT_469246v1 1693 3793 GGLTR10D-int 694 + 1693 3793 0 3 179,1561,333, 0,191,1767, +,+,+, 676070 LTR ERVK 585 chrUn_NT_469246v1 3975 6365 GGLTR7-int 496 - 3975 6365 0 2 732,336, 0,2054, -,-, 676071 LTR ERV1 585 chrUn_NT_469247v1 3293 4525 (ACCCCATAGGG)n 422 + 3293 4525 0 3 118,117,873, 0,180,359, +,+,+, 676087 Satellite Satellite 585 chrUn_NT_469247v1 10119 10213 (G)n 810 + 10119 10213 0 2 49,30, 0,64, +,+, 676096 Simple_repeat Simple_repeat 585 chrUn_NT_469248v1 2186 6207 GGXHOI 335 - 2186 6207 0 6 614,430,1783,399,245,291, 0,656,1144,2984,3422,3730, -,-,-,-,-,-, 676099 Satellite W-chromosome 585 chrUn_NT_469248v1 6870 9323 GGXHOI 377 - 6870 9323 0 3 961,768,631, 0,996,1822, -,-,-, 676101 Satellite W-chromosome 585 chrUn_NT_469248v1 9461 10103 GGXHOI 278 - 9461 10103 0 2 377,231, 0,411, -,-, 676102 Satellite W-chromosome 585 chrUn_NT_469249v1 2907 3364 CR1-H 679 - 2907 3364 0 2 163,294, 0,163, -,-, 676106 LINE CR1 585 chrUn_NT_469251v1 273 1936 GGXHOI 360 - 273 1936 0 2 987,614, 0,1049, -,-, 676121 Satellite W-chromosome 585 chrUn_NT_469251v1 2287 4407 GGXHOI 366 - 2287 4407 0 2 1027,1035, 0,1085, -,-, 676122 Satellite W-chromosome 585 chrUn_NT_469252v1 2083 4559 GGXHOI 398 + 2083 4559 0 2 625,1806, 0,670, +,+, 676134 Satellite W-chromosome 585 chrUn_NT_469252v1 8039 9236 GGXHOI 369 + 8039 9236 0 2 453,722, 0,475, +,+, 676142 Satellite W-chromosome 585 chrUn_NT_469253v1 1110 2339 GGXHOI 333 - 1110 2339 0 2 137,1052, 0,177, -,-, 676147 Satellite W-chromosome 585 chrUn_NT_469253v1 4085 10207 GGXHOI 370 - 4085 10207 0 4 2731,171,1522,1568, 0,2782,2975,4554, -,-,-,-, 676151 Satellite W-chromosome 585 chrUn_NT_469254v1 1516 3633 GGXHOI 355 - 1516 3633 0 2 1065,1034, 0,1083, -,-, 676155 Satellite W-chromosome 585 chrUn_NT_469254v1 5449 6289 GGXHOI 372 - 5449 6289 0 2 512,266, 0,574, -,-, 676158 Satellite W-chromosome 585 chrUn_NT_469257v1 2173 2420 (CTCTATGGGG)n 606 + 2173 2420 0 2 76,52, 0,195, +,+, 676213 Satellite Satellite 585 chrUn_NT_469257v1 2372 2928 (ACCCATAGAG)n 646 - 2372 2928 0 2 406,113, 0,443, -,-, 676215 Satellite Satellite 585 chrUn_NT_469257v1 3654 4089 (ACCCATAGAG)n 680 - 3654 4089 0 2 292,25, 0,410, -,-, 676222 Satellite Satellite 585 chrUn_NT_469257v1 4378 4635 (CTCTATGGGG)n 618 + 4378 4635 0 2 96,42, 0,215, +,+, 676225 Satellite Satellite 585 chrUn_NT_469257v1 4636 4998 (ACCCATAGAG)n 682 - 4636 4998 0 2 123,225, 0,137, -,-, 676227 Satellite Satellite 585 chrUn_NT_469257v1 6164 6552 (ACCCATAGAG)n 690 + 6164 6552 0 2 175,96, 0,292, +,+, 676234 Satellite Satellite 585 chrUn_NT_469257v1 6563 6884 (ACCCATAGAG)n 701 - 6563 6884 0 2 122,199, 0,122, -,-, 676237 Satellite Satellite 585 chrUn_NT_469257v1 7054 7482 (ACCCATAGAG)n 706 - 7054 7482 0 2 257,54, 0,374, -,-, 676239 Satellite Satellite 585 chrUn_NT_469257v1 8275 8514 (CTCTATGGGG)n 648 + 8275 8514 0 2 79,29, 0,210, +,+, 676245 Satellite Satellite 585 chrUn_NT_469258v1 5517 6162 CR1-X2 581 - 5517 6162 0 2 63,352, 0,293, -,-, 676252 LINE CR1 585 chrUn_NT_469261v1 3111 5294 GGLTR3F1 609 - 3111 5294 0 3 1921,53,142, 0,1923,2041, -,-,-, 676286 LTR ERVL 585 chrUn_NT_469262v1 988 3182 Sat-CR1_GG 184 - 988 3182 0 2 377,1656, 0,538, -,-, 676296 Satellite Satellite 585 chrUn_NT_469262v1 1569 4806 GGXHOI 575 - 1569 4806 0 3 527,777,1596, 0,844,1641, -,-,-, 676298 Satellite W-chromosome 585 chrUn_NT_469262v1 4884 10196 GGXHOI 562 - 4884 10196 0 4 36,389,165,14, 0,3704,4604,5298, -,-,-,-, 676300 Satellite W-chromosome 585 chrUn_NT_469264v1 2431 4138 GGXHOI 538 + 2431 4138 0 2 381,1276, 0,431, +,+, 676311 Satellite W-chromosome 585 chrUn_NT_469264v1 4204 5795 GGXHOI 550 + 4204 5795 0 2 1236,342, 0,1249, +,+, 676312 Satellite W-chromosome 585 chrUn_NT_469265v1 1094 2676 GGXHOI 382 + 1094 2676 0 2 472,1047, 0,535, +,+, 676323 Satellite W-chromosome 585 chrUn_NT_469265v1 3854 5910 GGXHOI 378 + 3854 5910 0 2 1084,909, 0,1147, +,+, 676325 Satellite W-chromosome 585 chrUn_NT_469265v1 8305 9264 GGXHOI 380 + 8305 9264 0 2 383,515, 0,444, +,+, 676329 Satellite W-chromosome 585 chrUn_NT_469265v1 9362 10200 GGXHOI 390 + 9362 10200 0 2 472,303, 0,535, +,+, 676330 Satellite W-chromosome 585 chrUn_NT_469266v1 3072 4372 GGXHOI 337 - 3072 4372 0 6 260,124,135,138,117,327, 0,301,464,648,839,973, -,-,-,-,-,-, 676332 Satellite W-chromosome 585 chrUn_NT_469266v1 4447 5832 GGXHOI 386 - 4447 5832 0 5 65,323,388,185,278, 0,99,460,881,1107, -,-,-,-,-, 676333 Satellite W-chromosome 585 chrUn_NT_469266v1 6260 6556 GGXHOI 387 - 6260 6556 0 2 137,143, 0,153, -,-, 676335 Satellite W-chromosome 585 chrUn_NT_469266v1 6732 7494 GGXHOI 435 - 6732 7494 0 4 215,147,128,152, 0,276,466,610, -,-,-,-, 676336 Satellite W-chromosome 585 chrUn_NT_469270v1 3084 3183 (C)n 810 + 3084 3183 0 2 31,25, 0,74, +,+, 676383 Simple_repeat Simple_repeat 585 chrUn_NT_469271v1 1647 2255 GGXHOI 343 - 1647 2255 0 2 192,395, 0,213, -,-, 676403 Satellite W-chromosome 585 chrUn_NT_469271v1 3590 4820 GGXHOI 370 - 3590 4820 0 2 568,620, 0,610, -,-, 676407 Satellite W-chromosome 585 chrUn_NT_469271v1 7171 10190 GGXHOI 368 - 7171 10190 0 4 607,820,1323,188, 0,653,1496,2831, -,-,-,-, 676416 Satellite W-chromosome 585 chrUn_NT_469273v1 4123 6294 GGXHOI 353 - 4123 6294 0 3 137,1795,201, 0,164,1970, -,-,-, 676424 Satellite W-chromosome 585 chrUn_NT_469273v1 6452 10194 GGXHOI 377 - 6452 10194 0 3 1363,1800,538, 0,1383,3204, -,-,-, 676425 Satellite W-chromosome 585 chrUn_NT_469274v1 3051 4591 GGXHOI 386 + 3051 4591 0 2 471,1006, 0,534, +,+, 676430 Satellite W-chromosome 585 chrUn_NT_469274v1 9313 10174 GGXHOI 328 + 9313 10174 0 2 704,136, 0,725, +,+, 676437 Satellite W-chromosome 585 chrUn_NT_469276v1 2534 2962 (CTCTATGGGG)n 296 - 2534 2962 0 2 130,251, 0,177, -,-, 676472 Satellite Satellite 585 chrUn_NT_469276v1 3027 3343 (CTCTATGGGG)n 324 - 3027 3343 0 2 174,93, 0,223, -,-, 676473 Satellite Satellite 585 chrUn_NT_469277v1 6500 6994 (CATGC)n 528 + 6500 6994 0 2 301,125, 0,369, +,+, 676493 Simple_repeat Simple_repeat 585 chrUn_NT_469277v1 8272 8722 (ACCCCATAGGG)n 517 + 8272 8722 0 3 118,142,159, 0,149,291, +,+,+, 676496 Satellite Satellite 585 chrUn_NT_469277v1 9000 9100 (G)n 817 + 9000 9100 0 2 25,20, 0,80, +,+, 676497 Simple_repeat Simple_repeat 585 chrUn_NT_469277v1 9721 10170 (GCCCCACAGCT)n 441 + 9721 10170 0 2 147,286, 0,163, +,+, 676501 Satellite Satellite 585 chrUn_NT_469279v1 6507 7710 GGXHOI 335 - 6507 7710 0 2 578,584, 0,619, -,-, 676521 Satellite W-chromosome 585 chrUn_NT_469280v1 4295 5068 CR1-F2 429 + 4295 5068 0 2 90,82, 0,691, +,+, 676533 LINE CR1 585 chrUn_NT_469280v1 4682 4835 CR1-F2 497 + 4682 4835 0 2 71,72, 0,81, +,+, 676536 LINE CR1 585 chrUn_NT_469282v1 9743 10156 (ACCCCATAGGG)n 596 - 9743 10156 0 2 128,261, 0,152, -,-, 676588 Satellite Satellite 585 chrUn_NT_469283v1 3078 3399 GGERV10_LTR 631 + 3078 3399 0 2 55,158, 0,163, +,+, 676592 LTR ERVL 585 chrUn_NT_469283v1 3399 5292 CR1-G 612 - 3399 5292 0 2 1562,279, 0,1614, -,-, 676593 LINE CR1 585 chrUn_NT_469283v1 6907 8527 GGERV20_I-int 867 - 6907 8527 0 2 877,743, 0,877, -,-, 676598 LTR ERVL 585 chrUn_NT_469285v1 4904 5526 CR1-G 430 - 4904 5526 0 2 112,460, 0,162, -,-, 676618 LINE CR1 585 chrUn_NT_469287v1 4959 5031 G-rich 388 + 4959 5031 0 2 24,20, 0,52, +,+, 676636 Low_complexity Low_complexity 585 chrUn_NT_469288v1 3634 6200 GGXHOI 394 - 3634 6200 0 6 414,1236,242,244,183,130, 0,446,1698,1958,2213,2436, -,-,-,-,-,-, 676645 Satellite W-chromosome 585 chrUn_NT_469288v1 6328 10167 GGXHOI 360 - 6328 10167 0 8 133,147,172,1053,703,253,285,898, 0,147,313,496,1596,2340,2612,2941, -,-,-,-,-,-,-,-, 676646 Satellite W-chromosome 585 chrUn_NT_469290v1 2554 3516 GGXHOI 388 + 2554 3516 0 2 385,514, 0,448, +,+, 676665 Satellite W-chromosome 585 chrUn_NT_469290v1 3700 5767 GGXHOI 379 + 3700 5767 0 3 385,1046,511, 0,448,1556, +,+,+, 676666 Satellite W-chromosome 585 chrUn_NT_469290v1 6434 8052 GGXHOI 391 + 6434 8052 0 2 1041,514, 0,1104, +,+, 676668 Satellite W-chromosome 585 chrUn_NT_469291v1 5954 7086 CR1-F2 887 - 5954 7086 0 2 475,656, 0,476, -,-, 676682 LINE CR1 585 chrUn_NT_469291v1 7911 8720 (CAGGC)n 505 + 7911 8720 0 3 174,386,192, 0,192,617, +,+,+, 676685 Simple_repeat Simple_repeat 585 chrUn_NT_469292v1 1532 1655 (CGCACG)n 178 + 1532 1655 0 2 71,23, 0,100, +,+, 676697 Simple_repeat Simple_repeat 585 chrUn_NT_469292v1 3373 3791 (GGATG)n 709 + 3373 3791 0 2 196,187, 0,231, +,+, 676703 Simple_repeat Simple_repeat 585 chrUn_NT_469292v1 3940 4357 (GGATG)n 657 + 3940 4357 0 2 195,193, 0,224, +,+, 676705 Simple_repeat Simple_repeat 585 chrUn_NT_469294v1 2786 10162 GGXHOI 553 - 2786 10162 0 9 621,351,223,333,93,205,409,262,64, 0,1127,1707,2517,3263,3370,5191,6111,7312, -,-,-,-,-,-,-,-,-, 676730 Satellite W-chromosome 585 chrUn_NT_469296v1 840 7205 GGXHOI 429 - 840 7205 0 4 271,757,4759,479, 0,307,1092,5886, -,-,-,-, 676745 Satellite W-chromosome 585 chrUn_NT_469296v1 7282 10155 GGXHOI 402 - 7282 10155 0 2 488,2325, 0,548, -,-, 676746 Satellite W-chromosome 585 chrUn_NT_469298v1 7060 7626 A-rich 575 + 7060 7626 0 2 457,52, 0,514, +,+, 676774 Low_complexity Low_complexity 585 chrUn_NT_469299v1 490 565 (TTCCTC)n 332 + 490 565 0 2 8,29, 0,46, +,+, 676782 Simple_repeat Simple_repeat 585 chrUn_NT_469300v1 7177 10159 GGXHOI 519 - 7177 10159 0 8 268,244,154,18,233,164,19,163, 0,636,1204,1375,1790,2333,2510,2819, -,-,-,-,-,-,-,-, 676829 Satellite W-chromosome 585 chrUn_NT_469301v1 2754 3381 CR1-H 692 + 2754 3381 0 2 469,139, 0,488, +,+, 676836 LINE CR1 585 chrUn_NT_469302v1 185 941 (ACCCCATAGGG)n 545 + 185 941 0 2 626,130, 0,626, +,+, 676844 Satellite Satellite 585 chrUn_NT_469302v1 3515 3740 (ACCCCATAGGG)n 568 - 3515 3740 0 2 73,32, 0,193, -,-, 676849 Satellite Satellite 585 chrUn_NT_469302v1 3811 4543 (ACCCATAGGG)n 614 - 3811 4543 0 2 282,436, 0,296, -,-, 676852 Satellite Satellite 585 chrUn_NT_469302v1 5128 5489 (GCCCCACAGCT)n 469 + 5128 5489 0 2 206,154, 0,207, +,+, 676856 Satellite Satellite 585 chrUn_NT_469302v1 5430 5676 (CTCTATGGGG)n 490 - 5430 5676 0 2 74,52, 0,194, -,-, 676857 Satellite Satellite 585 chrUn_NT_469302v1 5917 6316 (CTCTATGGGG)n 466 - 5917 6316 0 3 152,71,50, 0,175,349, -,-,-, 676861 Satellite Satellite 585 chrUn_NT_469303v1 695 2921 GGXHOI 569 + 695 2921 0 6 111,20,712,17,188,23, 0,528,561,1711,1747,2203, +,+,+,+,+,+, 676869 Satellite W-chromosome 585 chrUn_NT_469303v1 4084 5050 GGXHOI 552 + 4084 5050 0 2 625,21, 0,945, +,+, 676876 Satellite W-chromosome 585 chrUn_NT_469303v1 5846 6818 GGXHOI 558 + 5846 6818 0 2 443,118, 0,854, +,+, 676880 Satellite W-chromosome 585 chrUn_NT_469303v1 7620 7938 GGXHOI 505 + 7620 7938 0 2 77,228, 0,90, +,+, 676883 Satellite W-chromosome 585 chrUn_NT_469303v1 8017 9025 GGXHOI 433 + 8017 9025 0 3 471,65,117, 0,788,891, +,+,+, 676884 Satellite W-chromosome 585 chrUn_NT_469304v1 4365 7986 GGXHOI 530 + 4365 7986 0 4 470,1214,239,466, 0,853,2361,3155, +,+,+,+, 676897 Satellite W-chromosome 585 chrUn_NT_469304v1 8077 10151 GGXHOI 558 + 8077 10151 0 2 654,276, 0,1798, +,+, 676901 Satellite W-chromosome 585 chrUn_NT_469305v1 6148 7189 GGXHOI 350 - 6148 7189 0 3 485,146,373, 0,504,668, -,-,-, 676905 Satellite W-chromosome 585 chrUn_NT_469305v1 7589 8613 GGXHOI 344 - 7589 8613 0 3 185,232,562, 0,201,462, -,-,-, 676907 Satellite W-chromosome 585 chrUn_NT_469305v1 8757 9441 GGXHOI 411 - 8757 9441 0 2 398,244, 0,440, -,-, 676908 Satellite W-chromosome 585 chrUn_NT_469305v1 9560 10148 GGXHOI 385 - 9560 10148 0 3 93,136,291, 0,108,297, -,-,-, 676909 Satellite W-chromosome 585 chrUn_NT_469306v1 1540 4267 GGERVL-B-int 694 + 1540 4267 0 2 1815,912, 0,1815, +,+, 676913 LTR ERVL 585 chrUn_NT_469307v1 2182 4215 GGXHOI 413 - 2182 4215 0 4 1215,140,220,403, 0,1235,1395,1630, -,-,-,-, 676920 Satellite W-chromosome 585 chrUn_NT_469307v1 4808 5411 GGXHOI 407 - 4808 5411 0 2 391,197, 0,406, -,-, 676922 Satellite W-chromosome 585 chrUn_NT_469307v1 5506 5970 GGXHOI 397 - 5506 5970 0 2 158,277, 0,187, -,-, 676923 Satellite W-chromosome 585 chrUn_NT_469307v1 7130 8367 GGXHOI 372 - 7130 8367 0 2 850,331, 0,906, -,-, 676925 Satellite W-chromosome 585 chrUn_NT_469308v1 1090 3384 ENS3-int 929 - 1090 3384 0 3 928,875,491, 0,928,1803, -,-,-, 676929 LTR ERVL 585 chrUn_NT_469308v1 3381 5189 ENS3-int 942 - 3381 5189 0 2 928,880, 0,928, -,-, 676930 LTR ERVL 585 chrUn_NT_469308v1 9333 9594 (G)n 977 + 9333 9594 0 3 47,27,88, 0,87,173, +,+,+, 676931 Simple_repeat Simple_repeat 585 chrUn_NT_469309v1 7599 7697 G-rich 552 + 7599 7697 0 2 39,38, 0,60, +,+, 676936 Low_complexity Low_complexity 585 chrUn_NT_469309v1 9142 9553 CR1-H 697 - 9142 9553 0 2 317,94, 0,317, -,-, 676938 LINE CR1 585 chrUn_NT_469310v1 9719 10115 (CCTTG)n 590 + 9719 10115 0 2 185,192, 0,204, +,+, 676953 Simple_repeat Simple_repeat 585 chrUn_NT_469312v1 1007 1295 (ACCCCATAGGG)n 662 - 1007 1295 0 2 122,46, 0,242, -,-, 676969 Satellite Satellite 585 chrUn_NT_469312v1 1973 2368 (ACCCATAGAG)n 580 - 1973 2368 0 2 185,85, 0,310, -,-, 676973 Satellite Satellite 585 chrUn_NT_469312v1 7851 8205 (ACCCATAGGG)n 297 + 7851 8205 0 2 152,142, 0,212, +,+, 676977 Satellite Satellite 585 chrUn_NT_469313v1 6592 8905 GGXHOI 397 + 6592 8905 0 5 69,1537,278,182,139, 0,80,1628,1968,2174, +,+,+,+,+, 676980 Satellite W-chromosome 585 chrUn_NT_469313v1 9166 10097 GGXHOI 395 + 9166 10097 0 4 184,151,247,274, 0,203,365,657, +,+,+,+, 676981 Satellite W-chromosome 585 chrUn_NT_469317v1 6196 6422 Sat-CR1_GG 204 - 6196 6422 0 2 49,25, 0,201, -,-, 677027 Satellite Satellite 585 chrUn_NT_469317v1 6483 10140 GGXHOI 563 - 6483 10140 0 6 396,115,326,61,435,14, 0,999,1970,2643,2716,3643, -,-,-,-,-,-, 677029 Satellite W-chromosome 585 chrUn_NT_469319v1 640 773 (AAAGAACGG)n 976 + 640 773 0 2 43,43, 0,90, +,+, 677042 Simple_repeat Simple_repeat 585 chrUn_NT_469319v1 2596 2739 (AAAGAACGG)n 952 + 2596 2739 0 2 52,43, 0,100, +,+, 677052 Simple_repeat Simple_repeat 585 chrUn_NT_469319v1 7636 7778 (AAAGAACGG)n 1000 + 7636 7778 0 2 43,43, 0,99, +,+, 677061 Simple_repeat Simple_repeat 585 chrUn_NT_469320v1 2369 5446 GGXHOI 427 - 2369 5446 0 3 1061,1243,718, 0,1087,2359, -,-,-, 677073 Satellite W-chromosome 585 chrUn_NT_469320v1 5513 10135 GGXHOI 397 - 5513 10135 0 2 840,3763, 0,859, -,-, 677074 Satellite W-chromosome 585 chrUn_NT_469321v1 2111 4220 GGXHOI 380 + 2111 4220 0 2 1039,1007, 0,1102, +,+, 677079 Satellite W-chromosome 585 chrUn_NT_469321v1 6665 8520 GGXHOI 375 + 6665 8520 0 2 1039,753, 0,1102, +,+, 677082 Satellite W-chromosome 585 chrUn_NT_469322v1 9230 10117 (CCCTAA)n 623 + 9230 10117 0 3 184,461,194, 0,232,693, +,+,+, 677087 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 1141 1550 (CAAGG)n 545 + 1141 1550 0 3 46,77,191, 0,141,218, +,+,+, 677093 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 2965 3463 (CAAGG)n 529 + 2965 3463 0 2 270,178, 0,320, +,+, 677101 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 4638 4966 (CAGGC)n 329 + 4638 4966 0 2 227,85, 0,243, +,+, 677107 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 4966 5378 (CAAGG)n 539 + 4966 5378 0 3 46,77,191, 0,144,221, +,+,+, 677108 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 5855 6490 (CCTTG)n 474 + 5855 6490 0 2 179,429, 0,206, +,+, 677112 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 6846 7294 (CAAGG)n 536 + 6846 7294 0 2 220,178, 0,270, +,+, 677114 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 7355 8407 (CCTTG)n 497 + 7355 8407 0 4 197,188,179,434, 0,197,412,618, +,+,+,+, 677115 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 8727 9086 (CAAGG)n 517 + 8727 9086 0 2 168,178, 0,181, +,+, 677117 Simple_repeat Simple_repeat 585 chrUn_NT_469323v1 9167 9979 (CCTTG)n 471 + 9167 9979 0 3 220,348,194, 0,247,618, +,+,+, 677118 Simple_repeat Simple_repeat 585 chrUn_NT_469324v1 3866 5432 GGXHOI 369 - 3866 5432 0 2 506,1002, 0,564, -,-, 677126 Satellite W-chromosome 585 chrUn_NT_469325v1 8820 9360 (ATG)n 481 + 8820 9360 0 3 188,179,145, 0,203,395, +,+,+, 677145 Simple_repeat Simple_repeat 585 chrUn_NT_469326v1 3785 4825 (CAAGG)n 552 + 3785 4825 0 2 229,628, 0,412, +,+, 677151 Simple_repeat Simple_repeat 585 chrUn_NT_469326v1 5634 9187 GGLTR7A 529 - 5634 9187 0 2 323,3148, 0,405, -,-, 677157 LTR ERV1 585 chrUn_NT_469327v1 5497 7253 GGERVL-A-int 751 - 5497 7253 0 2 1298,458, 0,1298, -,-, 677166 LTR ERVL 585 chrUn_NT_469328v1 1212 2360 GGXHOI 421 - 1212 2360 0 2 216,888, 0,260, -,-, 677169 Satellite W-chromosome 585 chrUn_NT_469328v1 2472 4350 GGXHOI 401 - 2472 4350 0 3 778,330,709, 0,823,1169, -,-,-, 677170 Satellite W-chromosome 585 chrUn_NT_469328v1 4426 4914 GGXHOI 405 - 4426 4914 0 2 129,305, 0,183, -,-, 677171 Satellite W-chromosome 585 chrUn_NT_469328v1 5485 6864 GGXHOI 425 - 5485 6864 0 2 208,1151, 0,228, -,-, 677173 Satellite W-chromosome 585 chrUn_NT_469328v1 6956 10042 GGXHOI 420 - 6956 10042 0 3 1796,708,546, 0,1813,2540, -,-,-, 677174 Satellite W-chromosome 585 chrUn_NT_469329v1 111 2246 CR1-F 819 - 111 2246 0 3 371,461,1141, 0,533,994, -,-,-, 677176 LINE CR1 585 chrUn_NT_469329v1 4216 9186 CR1-D2 559 - 4216 9186 0 2 571,809, 0,4161, -,-, 677179 LINE CR1 585 chrUn_NT_469329v1 5472 8391 CR1-D 668 - 5472 8391 0 2 2810,109, 0,2810, -,-, 677180 LINE CR1 585 chrUn_NT_469329v1 9176 9420 Char12Mar1_GG 585 - 9176 9420 0 2 73,171, 0,73, -,-, 677181 DNA hAT-Charlie 585 chrUn_NT_469331v1 1811 6537 GGXHOI 355 - 1811 6537 0 2 2373,2316, 0,2410, -,-, 677187 Satellite W-chromosome 585 chrUn_NT_469331v1 7050 8666 GGXHOI 365 - 7050 8666 0 2 602,972, 0,644, -,-, 677189 Satellite W-chromosome 585 chrUn_NT_469336v1 6046 7402 CR1-H 672 + 6046 7402 0 2 1243,113, 0,1243, +,+, 677217 LINE CR1 585 chrUn_NT_469338v1 295 9058 GGXHOI 386 + 295 9058 0 8 547,1167,582,953,1790,2312,684,559, 0,569,1766,2364,3340,5144,7472,8204, +,+,+,+,+,+,+,+, 677223 Satellite W-chromosome 585 chrUn_NT_469338v1 9164 10114 GGXHOI 397 + 9164 10114 0 2 276,654, 0,296, +,+, 677224 Satellite W-chromosome 585 chrUn_NT_469339v1 1783 5557 GGXHOI 560 - 1783 5557 0 4 204,361,510,1130, 0,894,1689,2644, -,-,-,-, 677229 Satellite W-chromosome 585 chrUn_NT_469339v1 5569 10109 GGXHOI 572 - 5569 10109 0 4 1186,310,426,123, 0,1489,3225,4417, -,-,-,-, 677234 Satellite W-chromosome 585 chrUn_NT_469341v1 531 979 (CGAGG)n 524 + 531 979 0 2 260,11, 0,437, +,+, 677269 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 1499 1918 (CGAGG)n 524 + 1499 1918 0 2 189,180, 0,239, +,+, 677272 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 2668 3439 (CGAGG)n 503 + 2668 3439 0 3 352,156,40, 0,396,731, +,+,+, 677276 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 3590 4094 (CGAGG)n 513 + 3590 4094 0 2 188,278, 0,226, +,+, 677279 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 4917 5927 (CGAGG)n 507 + 4917 5927 0 2 322,636, 0,374, +,+, 677283 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 6463 7151 (CGAGG)n 456 + 6463 7151 0 2 283,230, 0,458, +,+, 677288 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 7227 7879 (CGAGG)n 546 + 7227 7879 0 2 217,251, 0,401, +,+, 677291 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 7979 8626 (CGAGG)n 531 + 7979 8626 0 2 253,363, 0,284, +,+, 677294 Simple_repeat Simple_repeat 585 chrUn_NT_469341v1 8681 9670 (CGAGG)n 530 + 8681 9670 0 3 445,132,214, 0,468,775, +,+,+, 677296 Simple_repeat Simple_repeat 585 chrUn_NT_469343v1 3440 4066 CR1-H 686 + 3440 4066 0 2 468,139, 0,487, +,+, 677338 LINE CR1 585 chrUn_NT_469344v1 5055 7787 GGXHOI 486 + 5055 7787 0 2 772,1924, 0,808, +,+, 677344 Satellite W-chromosome 585 chrUn_NT_469347v1 8360 8507 (CTTT)n 248 + 8360 8507 0 3 18,26,33, 0,59,114, +,+,+, 677364 Simple_repeat Simple_repeat 585 chrUn_NT_469348v1 4893 4995 (AACGGG)n 824 + 4893 4995 0 2 26,43, 0,59, +,+, 677374 Simple_repeat Simple_repeat 585 chrUn_NT_469349v1 2187 4835 GGXHOI 516 - 2187 4835 0 4 247,194,247,561, 0,571,1210,2087, -,-,-,-, 677388 Satellite W-chromosome 585 chrUn_NT_469349v1 8344 8986 GGXHOI 514 - 8344 8986 0 2 139,302, 0,340, -,-, 677401 Satellite W-chromosome 585 chrUn_NT_469350v1 1345 2492 (ACCCCATAGGG)n 381 + 1345 2492 0 7 130,111,111,111,111,111,111, 0,188,358,526,696,866,1036, +,+,+,+,+,+,+, 677410 Satellite Satellite 585 chrUn_NT_469350v1 2887 3149 (ACCCCATAGGG)n 367 + 2887 3149 0 2 120,119, 0,143, +,+, 677411 Satellite Satellite 585 chrUn_NT_469350v1 6186 6520 (ACCCCATAGGG)n 519 + 6186 6520 0 2 121,180, 0,154, +,+, 677423 Satellite Satellite 585 chrUn_NT_469350v1 6555 7036 (ACCCCATAGGG)n 453 + 6555 7036 0 3 49,21,120, 0,49,361, +,+,+, 677424 Satellite Satellite 585 chrUn_NT_469351v1 2156 5043 GGXHOI 487 - 2156 5043 0 2 2486,386, 0,2501, -,-, 677433 Satellite W-chromosome 585 chrUn_NT_469351v1 5107 9857 GGXHOI 497 - 5107 9857 0 6 182,983,1184,84,554,897, 0,215,1453,2875,2992,3853, -,-,-,-,-,-, 677434 Satellite W-chromosome 585 chrUn_NT_469355v1 612 993 (CAAGG)n 647 + 612 993 0 2 173,208, 0,173, +,+, 677460 Simple_repeat Simple_repeat 585 chrUn_NT_469355v1 7482 7707 G-rich 372 + 7482 7707 0 2 81,116, 0,109, +,+, 677471 Low_complexity Low_complexity 585 chrUn_NT_469356v1 5528 7808 GGXHOI 392 + 5528 7808 0 2 1952,271, 0,2009, +,+, 677478 Satellite W-chromosome 585 chrUn_NT_469356v1 7953 10085 GGXHOI 433 + 7953 10085 0 2 1727,369, 0,1763, +,+, 677479 Satellite W-chromosome 585 chrUn_NT_469358v1 1380 2544 GGXHOI 430 + 1380 2544 0 4 142,493,212,226, 0,181,712,938, +,+,+,+, 677485 Satellite W-chromosome 585 chrUn_NT_469358v1 2572 4216 GGXHOI 398 - 2572 4216 0 5 281,265,141,731,140, 0,298,579,760,1504, -,-,-,-,-, 677486 Satellite W-chromosome 585 chrUn_NT_469358v1 4302 4972 GGXHOI 338 - 4302 4972 0 2 129,527, 0,143, -,-, 677487 Satellite W-chromosome 585 chrUn_NT_469358v1 5038 5477 GGXHOI 399 - 5038 5477 0 2 138,280, 0,159, -,-, 677488 Satellite W-chromosome 585 chrUn_NT_469358v1 5589 10075 GGXHOI 393 - 5589 10075 0 6 326,429,543,400,339,2338, 0,343,789,1343,1762,2148, -,-,-,-,-,-, 677489 Satellite W-chromosome 585 chrUn_NT_469359v1 1243 1792 (CCTTG)n 638 + 1243 1792 0 2 325,47, 0,502, +,+, 677496 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 1947 2822 (CCTTG)n 592 + 1947 2822 0 2 252,255, 0,620, +,+, 677499 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 2857 3655 (CCTTG)n 612 + 2857 3655 0 3 129,84,227, 0,310,571, +,+,+, 677502 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 3656 4945 (CCTTG)n 627 + 3656 4945 0 4 160,25,181,255, 0,796,846,1034, +,+,+,+, 677505 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 3954 4272 (GCCTG)n 508 + 3954 4272 0 2 129,18, 0,300, +,+, 677507 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 5026 6211 (CCTTG)n 619 + 5026 6211 0 5 247,61,180,211,180, 0,475,583,783,1005, +,+,+,+,+, 677511 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 6250 7047 (CCTTG)n 600 + 6250 7047 0 3 182,176,255, 0,182,542, +,+,+, 677514 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 7143 8433 (CCTTG)n 611 + 7143 8433 0 4 333,135,174,177, 0,718,901,1113, +,+,+,+, 677517 Simple_repeat Simple_repeat 585 chrUn_NT_469359v1 8496 9964 (CCTTG)n 591 + 8496 9964 0 5 348,58,207,331,150, 0,517,614,821,1318, +,+,+,+,+, 677521 Simple_repeat Simple_repeat 585 chrUn_NT_469360v1 7338 7795 CR1-H 677 + 7338 7795 0 2 296,161, 0,296, +,+, 677533 LINE CR1 585 chrUn_NT_469363v1 5612 10080 GGXHOI 420 - 5612 10080 0 7 275,1267,1171,513,144,906,86, 0,292,1580,2769,3304,3464,4382, -,-,-,-,-,-,-, 677545 Satellite W-chromosome 585 chrUn_NT_469364v1 6464 10028 GGERV28_I-int 154 + 6464 10028 0 4 130,1333,609,529, 0,540,2178,3035, +,+,+,+, 677548 LTR ERVK 585 chrUn_NT_469366v1 2047 4761 GGLTR7-int 663 + 2047 4761 0 6 455,719,731,281,218,229, 0,455,1174,1905,2187,2485, +,+,+,+,+,+, 677560 LTR ERV1 585 chrUn_NT_469368v1 3208 7925 GGXHOI 535 + 3208 7925 0 9 343,111,656,201,511,688,41,502,537, 0,568,960,1667,1879,2432,3395,3666,4180, +,+,+,+,+,+,+,+,+, 677574 Satellite W-chromosome 585 chrUn_NT_469368v1 8008 9338 GGXHOI 546 + 8008 9338 0 2 346,760, 0,570, +,+, 677580 Satellite W-chromosome 585 chrUn_NT_469369v1 4445 10063 GGXHOI 548 - 4445 10063 0 5 1559,299,238,176,69, 0,2201,3896,4869,5549, -,-,-,-,-, 677593 Satellite W-chromosome 585 chrUn_NT_469370v1 8497 10071 GGXHOI 588 - 8497 10071 0 2 407,493, 0,1081, -,-, 677607 Satellite W-chromosome 585 chrUn_NT_469371v1 590 6407 GGXHOI 372 - 590 6407 0 4 98,2637,2699,326, 0,118,2775,5491, -,-,-,-, 677610 Satellite W-chromosome 585 chrUn_NT_469371v1 6490 9034 GGXHOI 391 - 6490 9034 0 2 2115,409, 0,2135, -,-, 677611 Satellite W-chromosome 585 chrUn_NT_469371v1 9117 10066 GGXHOI 383 - 9117 10066 0 2 436,491, 0,458, -,-, 677612 Satellite W-chromosome 585 chrUn_NT_469372v1 6285 6597 CR1-X 459 + 6285 6597 0 3 173,78,61, 0,173,251, +,+,+, 677617 LINE CR1 585 chrUn_NT_469374v1 1434 1890 CR1-H 679 - 1434 1890 0 2 163,293, 0,163, -,-, 677633 LINE CR1 585 chrUn_NT_469376v1 960 1475 CR1-D2 595 - 960 1475 0 2 72,307, 0,208, -,-, 677647 LINE CR1 585 chrUn_NT_469377v1 2222 2843 CR1-H 370 - 2222 2843 0 2 376,209, 0,412, -,-, 677662 LINE CR1 585 chrUn_NT_469377v1 4702 5306 CR1-H 353 - 4702 5306 0 2 373,199, 0,405, -,-, 677665 LINE CR1 585 chrUn_NT_469377v1 7161 7779 CR1-H 370 - 7161 7779 0 2 375,208, 0,410, -,-, 677668 LINE CR1 585 chrUn_NT_469380v1 122 1479 (CGAGG)n 517 + 122 1479 0 3 188,862,241, 0,222,1116, +,+,+, 677680 Simple_repeat Simple_repeat 585 chrUn_NT_469380v1 3022 3403 (CGAGG)n 499 + 3022 3403 0 2 194,176, 0,205, +,+, 677685 Simple_repeat Simple_repeat 585 chrUn_NT_469380v1 5353 5745 (CGAGG)n 579 + 5353 5745 0 2 179,178, 0,214, +,+, 677695 Simple_repeat Simple_repeat 585 chrUn_NT_469380v1 6590 7442 (CGAGG)n 542 + 6590 7442 0 2 203,534, 0,318, +,+, 677699 Simple_repeat Simple_repeat 585 chrUn_NT_469380v1 7521 8012 (CGAGG)n 552 + 7521 8012 0 2 272,43, 0,448, +,+, 677702 Simple_repeat Simple_repeat 585 chrUn_NT_469380v1 9196 10064 (CGAGG)n 532 + 9196 10064 0 2 667,185, 0,683, +,+, 677709 Simple_repeat Simple_repeat 585 chrUn_NT_469382v1 245 1849 GGXHOI 547 - 245 1849 0 3 510,21,723, 0,521,881, -,-,-, 677724 Satellite W-chromosome 585 chrUn_NT_469382v1 2466 4585 GGXHOI 540 - 2466 4585 0 3 542,699,224, 0,881,1895, -,-,-, 677728 Satellite W-chromosome 585 chrUn_NT_469382v1 4673 5624 GGXHOI 554 - 4673 5624 0 2 409,205, 0,746, -,-, 677731 Satellite W-chromosome 585 chrUn_NT_469382v1 5712 7824 GGXHOI 530 - 5712 7824 0 3 410,829,223, 0,745,1889, -,-,-, 677733 Satellite W-chromosome 585 chrUn_NT_469382v1 7913 8871 GGXHOI 542 - 7913 8871 0 2 410,214, 0,744, -,-, 677736 Satellite W-chromosome 585 chrUn_NT_469383v1 1094 3387 CR1-F 861 - 1094 3387 0 3 458,694,1140, 0,459,1153, -,-,-, 677743 LINE CR1 585 chrUn_NT_469383v1 5354 10049 CR1-D2 565 - 5354 10049 0 2 572,595, 0,4100, -,-, 677745 LINE CR1 585 chrUn_NT_469383v1 6606 9469 CR1-D 611 - 6606 9469 0 2 1968,850, 0,2013, -,-, 677746 LINE CR1 585 chrUn_NT_469384v1 1311 3934 GGXHOI 410 + 1311 3934 0 4 457,1195,460,395, 0,516,1753,2228, +,+,+,+, 677748 Satellite W-chromosome 585 chrUn_NT_469384v1 4856 8064 GGXHOI 426 + 4856 8064 0 6 496,401,393,863,146,816, 0,516,932,1345,2226,2392, +,+,+,+,+,+, 677750 Satellite W-chromosome 585 chrUn_NT_469384v1 8205 9840 GGXHOI 400 + 8205 9840 0 4 726,392,182,285, 0,741,1153,1350, +,+,+,+, 677751 Satellite W-chromosome 585 chrUn_NT_469385v1 1482 5995 GGXHOI 573 + 1482 5995 0 9 622,62,305,19,186,296,194,247,281, 0,642,1111,1813,1850,2331,3021,3538,4232, +,+,+,+,+,+,+,+,+, 677756 Satellite W-chromosome 585 chrUn_NT_469385v1 6037 9595 GGXHOI 546 + 6037 9595 0 6 441,194,297,193,297,423, 0,885,1404,2098,2615,3135, +,+,+,+,+,+, 677764 Satellite W-chromosome 585 chrUn_NT_469389v1 4028 5014 GGXHOI 381 - 4028 5014 0 3 93,347,506, 0,109,480, -,-,-, 677799 Satellite W-chromosome 585 chrUn_NT_469389v1 5108 6072 GGXHOI 375 - 5108 6072 0 2 726,218, 0,746, -,-, 677800 Satellite W-chromosome 585 chrUn_NT_469389v1 6565 9466 GGXHOI 317 - 6565 9466 0 6 713,386,492,267,706,179, 0,756,1199,1703,1981,2722, -,-,-,-,-,-, 677802 Satellite W-chromosome 585 chrUn_NT_469389v1 9643 10054 GGXHOI 361 - 9643 10054 0 2 261,135, 0,276, -,-, 677803 Satellite W-chromosome 585 chrUn_NT_469391v1 4092 5004 GGXHOI 381 - 4092 5004 0 2 310,588, 0,324, -,-, 677807 Satellite W-chromosome 585 chrUn_NT_469391v1 5214 6171 GGXHOI 402 - 5214 6171 0 2 423,505, 0,452, -,-, 677808 Satellite W-chromosome 585 chrUn_NT_469391v1 6337 10047 GGXHOI 451 - 6337 10047 0 8 1313,345,558,282,184,244,276,329, 0,1329,1701,2270,2601,2806,3092,3381, -,-,-,-,-,-,-,-, 677809 Satellite W-chromosome 585 chrUn_NT_469393v1 1726 2100 (CGAGG)n 618 + 1726 2100 0 2 118,65, 0,309, +,+, 677828 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 1844 2402 (CAAGG)n 470 + 1844 2402 0 3 191,146,35, 0,191,523, +,+,+, 677829 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 2181 2646 (CGAGG)n 641 + 2181 2646 0 2 186,279, 0,186, +,+, 677830 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 3428 3990 (CGAGG)n 580 + 3428 3990 0 2 186,363, 0,199, +,+, 677836 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 4045 4722 (CGAGG)n 559 + 4045 4722 0 3 275,32,179, 0,454,498, +,+,+, 677838 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 4849 5457 (CGAGG)n 555 + 4849 5457 0 3 189,182,196, 0,230,412, +,+,+, 677841 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 5864 6260 (CGAGG)n 585 + 5864 6260 0 2 184,212, 0,184, +,+, 677845 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 6987 8003 (CGAGG)n 571 + 6987 8003 0 3 173,208,298, 0,186,718, +,+,+, 677850 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 8384 8881 (CGAGG)n 562 + 8384 8881 0 2 181,301, 0,196, +,+, 677856 Simple_repeat Simple_repeat 585 chrUn_NT_469393v1 8920 9519 (CGAGG)n 583 + 8920 9519 0 3 182,187,210, 0,202,389, +,+,+, 677858 Simple_repeat Simple_repeat 585 chrUn_NT_469396v1 1172 2531 GGXHOI 404 - 1172 2531 0 2 598,737, 0,622, -,-, 677883 Satellite W-chromosome 585 chrUn_NT_469396v1 2652 4575 GGXHOI 323 - 2652 4575 0 4 840,173,435,374, 0,865,1064,1549, -,-,-,-, 677884 Satellite W-chromosome 585 chrUn_NT_469396v1 4682 5773 GGXHOI 332 - 4682 5773 0 3 128,178,714, 0,142,377, -,-,-, 677885 Satellite W-chromosome 585 chrUn_NT_469396v1 7007 7648 GGXHOI 261 - 7007 7648 0 2 378,218, 0,423, -,-, 677888 Satellite W-chromosome 585 chrUn_NT_469396v1 8100 9425 GGXHOI 356 - 8100 9425 0 5 135,128,372,345,236, 0,149,327,714,1089, -,-,-,-,-, 677890 Satellite W-chromosome 585 chrUn_NT_469396v1 9493 10039 GGXHOI 384 - 9493 10039 0 3 210,138,133, 0,229,413, -,-,-, 677891 Satellite W-chromosome 585 chrUn_NT_469402v1 3754 6324 CR1-F 527 + 3754 6324 0 8 200,200,202,204,155,204,204,180, 0,498,740,984,1453,1898,2144,2390, +,+,+,+,+,+,+,+, 677924 LINE CR1 585 chrUn_NT_469402v1 6368 8196 CR1-F 592 + 6368 8196 0 7 177,192,200,199,203,204,182, 0,222,456,914,1155,1400,1646, +,+,+,+,+,+,+, 677928 LINE CR1 585 chrUn_NT_469402v1 8240 10036 CR1-F 608 + 8240 10036 0 6 178,190,200,203,200,109, 0,223,455,954,1199,1687, +,+,+,+,+,+, 677930 LINE CR1 585 chrUn_NT_469403v1 6112 6341 (CTCTATGGGG)n 562 - 6112 6341 0 2 79,30, 0,199, -,-, 677939 Satellite Satellite 585 chrUn_NT_469403v1 6541 6932 (ACCCATAGGG)n 689 + 6541 6932 0 2 190,181, 0,210, +,+, 677942 Satellite Satellite 585 chrUn_NT_469403v1 7203 8144 (ACCCATAGAG)n 713 + 7203 8144 0 5 178,30,120,83,239, 0,322,382,502,702, +,+,+,+,+, 677945 Satellite Satellite 585 chrUn_NT_469403v1 7965 8356 (ACCCATAGGG)n 670 + 7965 8356 0 2 202,72, 0,319, +,+, 677949 Satellite Satellite 585 chrUn_NT_469403v1 8656 9807 (ACCCATAGGG)n 713 + 8656 9807 0 3 318,159,320, 0,318,831, +,+,+, 677954 Satellite Satellite 585 chrUn_NT_469403v1 9133 9487 (ACCCATTGGG)n 582 + 9133 9487 0 2 146,70, 0,284, +,+, 677955 Satellite Satellite 585 chrUn_NT_469404v1 1986 3735 GGXHOI 399 - 1986 3735 0 2 672,1054, 0,695, -,-, 677960 Satellite W-chromosome 585 chrUn_NT_469404v1 3822 4977 GGXHOI 357 - 3822 4977 0 2 717,415, 0,740, -,-, 677961 Satellite W-chromosome 585 chrUn_NT_469404v1 5697 8704 GGXHOI 372 - 5697 8704 0 3 562,530,1862, 0,583,1145, -,-,-, 677964 Satellite W-chromosome 585 chrUn_NT_469406v1 5054 8261 GGXHOI 344 - 5054 8261 0 5 359,97,1180,573,868, 0,399,530,1743,2339, -,-,-,-,-, 677973 Satellite W-chromosome 585 chrUn_NT_469406v1 8338 9046 GGXHOI 322 - 8338 9046 0 2 220,464, 0,244, -,-, 677974 Satellite W-chromosome 585 chrUn_NT_469406v1 9145 9737 GGXHOI 414 - 9145 9737 0 2 185,395, 0,197, -,-, 677975 Satellite W-chromosome 585 chrUn_NT_469409v1 3720 8518 GGLTR7-int 433 - 3720 8518 0 5 536,2174,55,442,708, 0,544,3124,3413,4090, -,-,-,-,-, 677993 LTR ERV1 585 chrUn_NT_469409v1 8749 9708 GGERVL-B-int 689 - 8749 9708 0 3 621,125,196, 0,638,763, -,-,-, 677995 LTR ERVL 585 chrUn_NT_469411v1 1542 2430 (TTAGGG)n 588 + 1542 2430 0 4 169,173,182,283, 0,207,398,605, +,+,+,+, 678004 Simple_repeat Simple_repeat 585 chrUn_NT_469411v1 2444 3364 (TTAGGG)n 540 + 2444 3364 0 3 386,205,160, 0,399,760, +,+,+, 678006 Simple_repeat Simple_repeat 585 chrUn_NT_469411v1 3940 5603 (TTAGGG)n 551 + 3940 5603 0 5 192,860,183,164,53, 0,206,1066,1263,1610, +,+,+,+,+, 678012 Simple_repeat Simple_repeat 585 chrUn_NT_469411v1 6206 7288 (TTAGGG)n 575 + 6206 7288 0 3 347,191,522, 0,358,560, +,+,+, 678017 Simple_repeat Simple_repeat 585 chrUn_NT_469411v1 7469 7847 (TTAGGG)n 660 + 7469 7847 0 2 177,201, 0,177, +,+, 678019 Simple_repeat Simple_repeat 585 chrUn_NT_469411v1 8149 8549 (TTAGGG)n 618 + 8149 8549 0 2 192,178, 0,222, +,+, 678024 Simple_repeat Simple_repeat 585 chrUn_NT_469411v1 8635 9357 (TTAGGG)n 670 + 8635 9357 0 3 263,168,265, 0,277,457, +,+,+, 678026 Simple_repeat Simple_repeat 585 chrUn_NT_469413v1 5285 6072 CR1-F 276 + 5285 6072 0 2 215,558, 0,229, +,+, 678065 LINE CR1 585 chrUn_NT_469414v1 4624 5509 (CA)n 321 + 4624 5509 0 3 379,90,357, 0,405,528, +,+,+, 678082 Simple_repeat Simple_repeat 585 chrUn_NT_469415v1 1816 2139 (ACCCCATAGGG)n 435 + 1816 2139 0 2 143,119, 0,204, +,+, 678096 Satellite Satellite 585 chrUn_NT_469415v1 4337 4621 (ACCCATAGAG)n 607 + 4337 4621 0 2 118,108, 0,176, +,+, 678108 Satellite Satellite 585 chrUn_NT_469415v1 4679 4991 (ACCCCATAGGG)n 471 + 4679 4991 0 2 110,148, 0,164, +,+, 678109 Satellite Satellite 585 chrUn_NT_469415v1 8316 9060 (ACCCATAGAG)n 624 - 8316 9060 0 3 207,120,349, 0,266,395, -,-,-, 678115 Satellite Satellite 585 chrUn_NT_469416v1 1301 1653 GGXHOI 367 - 1301 1653 0 2 124,193, 0,159, -,-, 678118 Satellite W-chromosome 585 chrUn_NT_469416v1 1746 3683 GGXHOI 373 - 1746 3683 0 2 1787,133, 0,1804, -,-, 678119 Satellite W-chromosome 585 chrUn_NT_469416v1 3792 4800 GGXHOI 393 - 3792 4800 0 3 222,217,512, 0,235,496, -,-,-, 678120 Satellite W-chromosome 585 chrUn_NT_469416v1 4926 6352 GGXHOI 369 - 4926 6352 0 4 224,132,483,509, 0,238,405,917, -,-,-,-, 678121 Satellite W-chromosome 585 chrUn_NT_469416v1 6443 8960 GGXHOI 381 - 6443 8960 0 6 706,278,388,676,129,255, 0,726,1022,1426,2116,2262, -,-,-,-,-,-, 678122 Satellite W-chromosome 585 chrUn_NT_469416v1 9236 10008 GGXHOI 413 - 9236 10008 0 2 235,481, 0,291, -,-, 678123 Satellite W-chromosome 585 chrUn_NT_469417v1 1511 3018 GGXHOI 395 - 1511 3018 0 3 354,816,260, 0,374,1247, -,-,-, 678125 Satellite W-chromosome 585 chrUn_NT_469417v1 5289 6308 GGXHOI 382 - 5289 6308 0 3 271,389,326, 0,291,693, -,-,-, 678128 Satellite W-chromosome 585 chrUn_NT_469417v1 8144 8788 GGXHOI 367 - 8144 8788 0 2 265,362, 0,282, -,-, 678133 Satellite W-chromosome 585 chrUn_NT_469417v1 9407 9978 GGXHOI 370 - 9407 9978 0 2 292,235, 0,336, -,-, 678135 Satellite W-chromosome 585 chrUn_NT_469419v1 5755 6877 CR1-B2 679 + 5755 6877 0 2 225,894, 0,228, +,+, 678152 LINE CR1 585 chrUn_NT_469420v1 319 1205 (CAAGG)n 585 + 319 1205 0 2 416,439, 0,447, +,+, 678159 Simple_repeat Simple_repeat 585 chrUn_NT_469420v1 1257 1983 (CAAGG)n 577 + 1257 1983 0 3 192,102,224, 0,218,502, +,+,+, 678161 Simple_repeat Simple_repeat 585 chrUn_NT_469420v1 2019 2599 (CAAGG)n 596 + 2019 2599 0 2 184,370, 0,210, +,+, 678164 Simple_repeat Simple_repeat 585 chrUn_NT_469420v1 2616 4163 (CAAGG)n 581 + 2616 4163 0 5 175,188,581,223,152, 0,189,391,992,1395, +,+,+,+,+, 678166 Simple_repeat Simple_repeat 585 chrUn_NT_469420v1 4392 7331 (CAAGG)n 563 + 4392 7331 0 9 199,280,199,303,381,89,40,196,471, 0,211,518,736,1091,1642,1912,2250,2468, +,+,+,+,+,+,+,+,+, 678169 Simple_repeat Simple_repeat 585 chrUn_NT_469420v1 7553 9724 (CAAGG)n 607 + 7553 9724 0 7 181,727,195,215,241,85,28, 0,181,908,1146,1621,1880,2143, +,+,+,+,+,+,+, 678174 Simple_repeat Simple_repeat 585 chrUn_NT_469421v1 7770 8211 (CATG)n 205 + 7770 8211 0 2 196,213, 0,228, +,+, 678186 Simple_repeat Simple_repeat 585 chrUn_NT_469422v1 3333 9999 GGXHOI 545 + 3333 9999 0 8 258,519,810,253,22,864,128,129, 0,509,1350,2760,3552,5303,6215,6537, +,+,+,+,+,+,+,+, 678198 Satellite W-chromosome 585 chrUn_NT_469423v1 347 1286 GGXHOI 324 + 347 1286 0 3 431,159,260, 0,494,679, +,+,+, 678204 Satellite W-chromosome 585 chrUn_NT_469423v1 5678 6834 GGXHOI 368 + 5678 6834 0 4 170,381,239,227, 0,225,663,929, +,+,+,+, 678210 Satellite W-chromosome 585 chrUn_NT_469423v1 7504 9563 GGXHOI 365 + 7504 9563 0 3 457,516,1002, 0,478,1057, +,+,+, 678212 Satellite W-chromosome 585 chrUn_NT_469424v1 6235 9997 GGXHOI 384 - 6235 9997 0 4 309,994,1459,876, 0,346,1391,2886, -,-,-,-, 678217 Satellite W-chromosome 585 chrUn_NT_469425v1 4045 4310 (CAAGG)n 686 + 4045 4310 0 2 58,204, 0,61, +,+, 678223 Simple_repeat Simple_repeat 585 chrUn_NT_469425v1 5856 6233 (CAAGG)n 643 + 5856 6233 0 2 178,199, 0,178, +,+, 678236 Simple_repeat Simple_repeat 585 chrUn_NT_469427v1 7328 7428 (G)n 900 + 7328 7428 0 2 22,22, 0,78, +,+, 678251 Simple_repeat Simple_repeat 585 chrUn_NT_469428v1 1526 3547 GGLTR7-int 615 - 1526 3547 0 4 31,50,742,538, 0,33,714,1483, -,-,-,-, 678257 LTR ERV1 585 chrUn_NT_469429v1 2243 3487 GGXHOI 573 - 2243 3487 0 3 161,122,705, 0,204,539, -,-,-, 678264 Satellite W-chromosome 585 chrUn_NT_469429v1 3759 6346 GGXHOI 570 - 3759 6346 0 5 233,147,52,365,389, 0,244,1064,1160,2198, -,-,-,-,-, 678268 Satellite W-chromosome 585 chrUn_NT_469429v1 6443 9993 GGXHOI 503 - 6443 9993 0 4 402,292,148,1541, 0,1017,1320,2009, -,-,-,-, 678271 Satellite W-chromosome 585 chrUn_NT_469430v1 5626 7384 GGERVL-A-int 755 + 5626 7384 0 2 457,1301, 0,457, +,+, 678276 LTR ERVL 585 chrUn_NT_469431v1 1728 7988 GGXHOI 415 + 1728 7988 0 3 5872,149,168, 0,5928,6092, +,+,+, 678281 Satellite W-chromosome 585 chrUn_NT_469431v1 8177 9997 GGXHOI 391 + 8177 9997 0 2 854,911, 0,909, +,+, 678282 Satellite W-chromosome 585 chrUn_NT_469432v1 323 2013 GGXHOI 369 - 323 2013 0 2 664,972, 0,718, -,-, 678284 Satellite W-chromosome 585 chrUn_NT_469432v1 2199 4246 GGXHOI 345 - 2199 4246 0 2 1758,272, 0,1775, -,-, 678285 Satellite W-chromosome 585 chrUn_NT_469432v1 4588 7009 GGXHOI 365 - 4588 7009 0 3 982,636,765, 0,1004,1656, -,-,-, 678286 Satellite W-chromosome 585 chrUn_NT_469432v1 7215 9982 GGXHOI 362 - 7215 9982 0 2 614,2111, 0,656, -,-, 678287 Satellite W-chromosome 585 chrUn_NT_469433v1 2415 8130 GGXHOI 363 - 2415 8130 0 6 2121,440,1652,815,443,70, 0,2143,2612,4301,5177,5645, -,-,-,-,-,-, 678292 Satellite W-chromosome 585 chrUn_NT_469433v1 8364 9865 GGXHOI 326 - 8364 9865 0 2 703,777, 0,724, -,-, 678296 Satellite W-chromosome 585 chrUn_NT_469436v1 4819 5204 (CATCC)n 621 + 4819 5204 0 2 172,151, 0,234, +,+, 678318 Simple_repeat Simple_repeat 585 chrUn_NT_469437v1 2873 3490 CR1-H 381 + 2873 3490 0 2 209,373, 0,244, +,+, 678336 LINE CR1 585 chrUn_NT_469437v1 5160 5778 CR1-H 382 + 5160 5778 0 2 208,375, 0,243, +,+, 678338 LINE CR1 585 chrUn_NT_469437v1 7617 8140 CR1-H 381 + 7617 8140 0 2 207,282, 0,241, +,+, 678341 LINE CR1 585 chrUn_NT_469438v1 3739 9987 Z-REP 860 + 3739 9987 0 3 1301,390,4048, 0,1780,2200, +,+,+, 678347 Satellite macro 585 chrUn_NT_469439v1 1722 3974 GGXHOI 538 - 1722 3974 0 4 21,493,60,718, 0,362,1136,1534, -,-,-,-, 678353 Satellite W-chromosome 585 chrUn_NT_469439v1 5820 6898 GGXHOI 525 - 5820 6898 0 3 425,66,205, 0,465,873, -,-,-, 678359 Satellite W-chromosome 585 chrUn_NT_469439v1 7065 7780 GGXHOI 458 - 7065 7780 0 2 285,388, 0,327, -,-, 678361 Satellite W-chromosome 585 chrUn_NT_469439v1 7997 8942 GGXHOI 548 - 7997 8942 0 2 400,133, 0,812, -,-, 678362 Satellite W-chromosome 585 chrUn_NT_469439v1 9029 9986 GGXHOI 518 - 9029 9986 0 3 197,62,17, 0,481,940, -,-,-, 678364 Satellite W-chromosome 585 chrUn_NT_469440v1 541 2158 GGXHOI 373 + 541 2158 0 2 470,1086, 0,531, +,+, 678368 Satellite W-chromosome 585 chrUn_NT_469440v1 2262 3047 GGXHOI 358 + 2262 3047 0 2 624,141, 0,644, +,+, 678369 Satellite W-chromosome 585 chrUn_NT_469440v1 7705 9287 GGXHOI 367 + 7705 9287 0 2 483,1081, 0,501, +,+, 678376 Satellite W-chromosome 585 chrUn_NT_469441v1 2531 2901 GGXHOI 354 + 2531 2901 0 2 107,248, 0,122, +,+, 678382 Satellite W-chromosome 585 chrUn_NT_469441v1 3289 8342 GGXHOI 365 + 3289 8342 0 3 539,3835,600, 0,595,4453, +,+,+, 678383 Satellite W-chromosome 585 chrUn_NT_469442v1 5704 9961 GGXHOI 364 - 5704 9961 0 5 1253,520,662,320,1389, 0,1316,1852,2532,2868, -,-,-,-,-, 678389 Satellite W-chromosome 585 chrUn_NT_469443v1 8928 9970 GGXHOI 381 - 8928 9970 0 2 887,115, 0,927, -,-, 678391 Satellite W-chromosome 585 chrUn_NT_469444v1 2096 8122 CR1-C 457 + 2096 8122 0 3 135,137,130, 0,2949,5896, +,+,+, 678393 LINE CR1 585 chrUn_NT_469445v1 306 1226 GGXHOI 520 + 306 1226 0 2 297,226, 0,694, +,+, 678395 Satellite W-chromosome 585 chrUn_NT_469445v1 1608 2448 GGXHOI 505 + 1608 2448 0 2 239,556, 0,284, +,+, 678398 Satellite W-chromosome 585 chrUn_NT_469445v1 2490 9673 GGXHOI 548 + 2490 9673 0 12 444,223,247,194,299,223,297,195,247,193,303,163, 0,893,1411,2105,2622,3318,3838,4532,5049,5743,6252,7020, +,+,+,+,+,+,+,+,+,+,+,+, 678400 Satellite W-chromosome 585 chrUn_NT_469446v1 6669 7792 CR1-B2 686 + 6669 7792 0 2 226,894, 0,229, +,+, 678421 LINE CR1 585 chrUn_NT_469447v1 4703 6621 GGLTR7-int 674 - 4703 6621 0 4 33,74,651,528, 0,34,739,1390, -,-,-,-, 678429 LTR ERV1 585 chrUn_NT_469450v1 6242 7220 GGXHOI 362 - 6242 7220 0 2 261,700, 0,278, -,-, 678437 Satellite W-chromosome 585 chrUn_NT_469451v1 7229 8591 GGXHOI 593 + 7229 8591 0 2 153,1195, 0,167, +,+, 678445 Satellite W-chromosome 585 chrUn_NT_469451v1 9164 9953 GGXHOI 566 + 9164 9953 0 2 361,231, 0,558, +,+, 678447 Satellite W-chromosome 585 chrUn_NT_469452v1 642 1291 (CAAGG)n 525 + 642 1291 0 2 374,258, 0,391, +,+, 678454 Simple_repeat Simple_repeat 585 chrUn_NT_469452v1 1339 2184 (CCTTG)n 470 + 1339 2184 0 2 509,54, 0,791, +,+, 678455 Simple_repeat Simple_repeat 585 chrUn_NT_469452v1 3341 3696 (CAAGG)n 420 + 3341 3696 0 2 121,49, 0,306, +,+, 678462 Simple_repeat Simple_repeat 585 chrUn_NT_469452v1 5352 5902 (CAAGG)n 493 + 5352 5902 0 3 196,179,154, 0,217,396, +,+,+, 678469 Simple_repeat Simple_repeat 585 chrUn_NT_469452v1 5900 6797 (CCTTG)n 486 + 5900 6797 0 3 302,18,53, 0,479,844, +,+,+, 678470 Simple_repeat Simple_repeat 585 chrUn_NT_469456v1 7534 9177 GGXHOI 393 + 7534 9177 0 4 1118,172,175,97, 0,1141,1357,1546, +,+,+,+, 678514 Satellite W-chromosome 585 chrUn_NT_469457v1 9650 9749 (T)n 613 + 9650 9749 0 2 32,27, 0,72, +,+, 678521 Simple_repeat Simple_repeat 585 chrUn_NT_469458v1 3593 9083 GGXHOI 397 - 3593 9083 0 6 747,306,798,2229,632,699, 0,769,1092,1902,4142,4791, -,-,-,-,-,-, 678523 Satellite W-chromosome 585 chrUn_NT_469458v1 9178 9947 GGXHOI 295 - 9178 9947 0 2 167,581, 0,188, -,-, 678524 Satellite W-chromosome 585 chrUn_NT_469459v1 1961 5537 GGXHOI 398 + 1961 5537 0 4 441,1569,442,1051, 0,478,2058,2525, +,+,+,+, 678526 Satellite W-chromosome 585 chrUn_NT_469459v1 5722 6687 GGXHOI 392 + 5722 6687 0 2 386,516, 0,449, +,+, 678527 Satellite W-chromosome 585 chrUn_NT_469459v1 6872 7837 GGXHOI 392 + 6872 7837 0 2 386,516, 0,449, +,+, 678528 Satellite W-chromosome 585 chrUn_NT_469459v1 7936 8987 GGXHOI 395 + 7936 8987 0 2 472,516, 0,535, +,+, 678529 Satellite W-chromosome 585 chrUn_NT_469460v1 1692 4411 GGXHOI 392 - 1692 4411 0 7 211,765,138,610,519,85,226, 0,255,1069,1220,1846,2379,2493, -,-,-,-,-,-,-, 678533 Satellite W-chromosome 585 chrUn_NT_469460v1 4505 5737 GGXHOI 431 - 4505 5737 0 2 215,1001, 0,231, -,-, 678534 Satellite W-chromosome 585 chrUn_NT_469460v1 6452 8094 GGXHOI 314 - 6452 8094 0 4 636,91,694,147, 0,650,755,1495, -,-,-,-, 678536 Satellite W-chromosome 585 chrUn_NT_469460v1 8172 9947 GGXHOI 420 - 8172 9947 0 6 218,475,298,318,209,109, 0,236,727,1071,1411,1666, -,-,-,-,-,-, 678537 Satellite W-chromosome 585 chrUn_NT_469462v1 3195 3506 (ACCG)n 309 + 3195 3506 0 2 119,179, 0,132, +,+, 678574 Simple_repeat Simple_repeat 585 chrUn_NT_469464v1 5106 6496 CR1-X 491 + 5106 6496 0 4 111,171,78,50, 0,1081,1252,1340, +,+,+,+, 678590 LINE CR1 585 chrUn_NT_469466v1 1266 4688 GGXHOI 514 + 1266 4688 0 5 208,300,290,175,1163, 0,460,1087,1762,2259, +,+,+,+,+, 678601 Satellite W-chromosome 585 chrUn_NT_469466v1 4765 6758 GGXHOI 474 + 4765 6758 0 3 276,246,1041, 0,512,952, +,+,+, 678606 Satellite W-chromosome 585 chrUn_NT_469466v1 6980 7752 GGXHOI 442 + 6980 7752 0 2 20,502, 0,270, +,+, 678609 Satellite W-chromosome 585 chrUn_NT_469466v1 8759 9217 GGXHOI 544 + 8759 9217 0 2 83,164, 0,294, +,+, 678614 Satellite W-chromosome 585 chrUn_NT_469467v1 9384 9721 (CACTC)n 260 + 9384 9721 0 3 18,82,133, 0,65,204, +,+,+, 678655 Simple_repeat Simple_repeat 585 chrUn_NT_469470v1 318 9909 (CCCTAA)n 504 + 318 9909 0 2 9374,217, 0,9374, +,+, 678671 Simple_repeat Simple_repeat 585 chrUn_NT_469471v1 4037 4227 (AGG)n 838 + 4037 4227 0 3 22,22,22, 0,84,168, +,+,+, 678677 Simple_repeat Simple_repeat 585 chrUn_NT_469472v1 788 2097 (CGGA)n 305 + 788 2097 0 4 344,135,142,223, 0,563,917,1086, +,+,+,+, 678684 Simple_repeat Simple_repeat 585 chrUn_NT_469472v1 7215 8497 (ACCCCATAGGG)n 434 - 7215 8497 0 6 165,165,159,209,91,160, 0,211,425,606,974,1122, -,-,-,-,-,-, 678695 Satellite Satellite 585 chrUn_NT_469473v1 2052 5210 GGLTR7A 753 - 2052 5210 0 4 117,266,1436,1301, 0,118,385,1857, -,-,-,-, 678699 LTR ERV1 585 chrUn_NT_469473v1 7137 9931 Z-REP 843 + 7137 9931 0 3 423,243,1991, 0,548,803, +,+,+, 678703 Satellite macro 585 chrUn_NT_469477v1 1847 2694 GGXHOI 387 - 1847 2694 0 2 583,232, 0,615, -,-, 678710 Satellite W-chromosome 585 chrUn_NT_469477v1 2769 5892 GGXHOI 367 - 2769 5892 0 9 630,185,439,261,526,250,215,278,117, 0,662,875,1335,1613,2173,2459,2688,3006, -,-,-,-,-,-,-,-,-, 678711 Satellite W-chromosome 585 chrUn_NT_469477v1 6232 7785 GGXHOI 399 - 6232 7785 0 2 1021,519, 0,1034, -,-, 678713 Satellite W-chromosome 585 chrUn_NT_469477v1 8864 9926 GGXHOI 413 - 8864 9926 0 3 269,572,133, 0,316,929, -,-,-, 678715 Satellite W-chromosome 585 chrUn_NT_469478v1 779 9525 GGXHOI 428 - 779 9525 0 8 679,234,897,1665,1162,1138,1056,1820, 0,690,940,1852,3528,4705,5854,6926, -,-,-,-,-,-,-,-, 678717 Satellite W-chromosome 585 chrUn_NT_469481v1 3554 5267 GGXHOI 428 - 3554 5267 0 3 696,134,812, 0,730,901, -,-,-, 678722 Satellite W-chromosome 585 chrUn_NT_469481v1 5334 7674 GGXHOI 394 - 5334 7674 0 4 205,491,780,806, 0,221,733,1534, -,-,-,-, 678723 Satellite W-chromosome 585 chrUn_NT_469481v1 7849 9051 GGXHOI 397 - 7849 9051 0 3 223,503,446, 0,242,756, -,-,-, 678724 Satellite W-chromosome 585 chrUn_NT_469481v1 9197 9854 GGXHOI 255 - 9197 9854 0 2 164,436, 0,221, -,-, 678725 Satellite W-chromosome 585 chrUn_NT_469483v1 5740 7888 Sat-CR1_GG 166 + 5740 7888 0 2 57,1464, 0,684, +,+, 678732 Satellite Satellite 585 chrUn_NT_469483v1 6467 9919 GGXHOI 548 + 6467 9919 0 4 1751,236,187,218, 0,2116,2368,3234, +,+,+,+, 678734 Satellite W-chromosome 585 chrUn_NT_469486v1 939 1219 (ACCCCATAGGG)n 465 + 939 1219 0 2 121,123, 0,157, +,+, 678743 Satellite Satellite 585 chrUn_NT_469486v1 1522 2089 (ACCCATAGAG)n 614 + 1522 2089 0 3 240,11,68, 0,364,499, +,+,+, 678744 Satellite Satellite 585 chrUn_NT_469486v1 3436 3853 (CTCTATGGGG)n 519 - 3436 3853 0 2 257,116, 0,301, -,-, 678751 Satellite Satellite 585 chrUn_NT_469487v1 8614 9754 CR1-B2 639 - 8614 9754 0 2 913,222, 0,918, -,-, 678781 LINE CR1 585 chrUn_NT_469488v1 9321 9721 (TTAGGG)n 544 + 9321 9721 0 2 168,182, 0,218, +,+, 678787 Simple_repeat Simple_repeat 585 chrUn_NT_469489v1 230 1142 CR1-F 551 + 230 1142 0 4 201,203,203,180, 0,242,487,732, +,+,+,+, 678789 LINE CR1 585 chrUn_NT_469489v1 1407 6043 CR1-F 544 + 1407 6043 0 14 190,200,203,203,204,180,159,200,202,202,204,155,189,178, 0,232,731,976,1221,1467,1691,2118,2615,2859,3103,3572,4017,4458, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 678791 LINE CR1 585 chrUn_NT_469489v1 6298 7157 CR1-F 488 + 6298 7157 0 4 163,199,194,160, 0,205,449,699, +,+,+,+, 678799 LINE CR1 585 chrUn_NT_469489v1 7199 9021 CR1-F 530 + 7199 9021 0 6 204,205,149,204,200,181, 0,246,718,1153,1399,1641, +,+,+,+,+,+, 678800 LINE CR1 585 chrUn_NT_469489v1 9065 9907 CR1-F 629 + 9065 9907 0 4 178,191,198,144, 0,223,455,698, +,+,+,+, 678803 LINE CR1 585 chrUn_NT_469490v1 5890 6830 (CCCTAA)n 497 + 5890 6830 0 3 453,195,228, 0,465,712, +,+,+, 678805 Simple_repeat Simple_repeat 585 chrUn_NT_469490v1 6991 9259 (CCCTAA)n 599 + 6991 9259 0 7 367,434,33,31,183,208,398, 0,393,1024,1396,1455,1638,1870, +,+,+,+,+,+,+, 678806 Simple_repeat Simple_repeat 585 chrUn_NT_469491v1 489 2518 GGXHOI 386 + 489 2518 0 3 972,585,439, 0,991,1590, +,+,+, 678818 Satellite W-chromosome 585 chrUn_NT_469491v1 2567 4761 GGXHOI 430 + 2567 4761 0 3 769,146,1247, 0,780,947, +,+,+, 678820 Satellite W-chromosome 585 chrUn_NT_469491v1 4788 5845 GGXHOI 345 + 4788 5845 0 2 860,146, 0,911, +,+, 678822 Satellite W-chromosome 585 chrUn_NT_469491v1 7093 9901 GGXHOI 353 + 7093 9901 0 4 1332,280,172,951, 0,1348,1663,1857, +,+,+,+, 678827 Satellite W-chromosome 585 chrUn_NT_469492v1 5348 5442 CR1-C4 666 - 5348 5442 0 2 43,51, 0,43, -,-, 678838 LINE CR1 585 chrUn_NT_469492v1 6310 6463 CR1AVI 632 - 6310 6463 0 3 53,51,49, 0,53,104, -,-,-, 678849 LINE CR1 585 chrUn_NT_469492v1 6941 7041 CR1AVI 572 - 6941 7041 0 2 53,47, 0,53, -,-, 678856 LINE CR1 585 chrUn_NT_469492v1 7230 7340 CR1-B2 653 - 7230 7340 0 2 60,50, 0,60, -,-, 678860 LINE CR1 585 chrUn_NT_469492v1 9064 9161 CR1-C4 564 - 9064 9161 0 2 53,44, 0,53, -,-, 678882 LINE CR1 585 chrUn_NT_469492v1 9210 9314 CR1AVI 566 - 9210 9314 0 2 53,51, 0,53, -,-, 678884 LINE CR1 585 chrUn_NT_469493v1 2423 3293 GGXHOI 287 - 2423 3293 0 2 151,674, 0,196, -,-, 678890 Satellite W-chromosome 585 chrUn_NT_469493v1 4009 5446 GGXHOI 328 - 4009 5446 0 2 325,1051, 0,386, -,-, 678892 Satellite W-chromosome 585 chrUn_NT_469495v1 89 467 (CCTTG)n 532 + 89 467 0 2 163,37, 0,341, +,+, 678939 Simple_repeat Simple_repeat 585 chrUn_NT_469495v1 456 1442 (GCCTG)n 489 + 456 1442 0 4 212,76,131,205, 0,390,466,781, +,+,+,+, 678942 Simple_repeat Simple_repeat 585 chrUn_NT_469495v1 1714 2263 (GCCTG)n 526 + 1714 2263 0 2 242,119, 0,430, +,+, 678947 Simple_repeat Simple_repeat 585 chrUn_NT_469495v1 4791 7274 GGERVL-B-int 758 + 4791 7274 0 3 319,1259,905, 0,319,1578, +,+,+, 678953 LTR ERVL 585 chrUn_NT_469495v1 8005 9396 GGLTR7-int 339 + 8005 9396 0 3 99,209,279, 0,125,1112, +,+,+, 678955 LTR ERV1 585 chrUn_NT_469497v1 4146 4286 ENS1B-LTR 488 - 4146 4286 0 2 88,14, 0,126, -,-, 678974 LTR ERVL 585 chrUn_NT_469497v1 6192 8664 GGLTR7-int 885 - 6192 8664 0 3 507,223,801, 0,1448,1671, -,-,-, 678981 LTR ERV1 585 chrUn_NT_469498v1 4921 8525 GGXHOI 440 - 4921 8525 0 2 2212,1380, 0,2224, -,-, 678986 Satellite W-chromosome 585 chrUn_NT_469498v1 8609 9897 GGXHOI 375 - 8609 9897 0 2 1118,149, 0,1139, -,-, 678987 Satellite W-chromosome 585 chrUn_NT_469501v1 4651 4718 G-rich 428 + 4651 4718 0 2 21,11, 0,56, +,+, 678999 Low_complexity Low_complexity 585 chrUn_NT_469501v1 8482 8902 (GGATG)n 615 + 8482 8902 0 2 192,205, 0,215, +,+, 679011 Simple_repeat Simple_repeat 585 chrUn_NT_469502v1 1786 2969 (ACCCCATAGGG)n 463 + 1786 2969 0 6 147,390,32,65,135,30, 0,147,662,820,907,1153, +,+,+,+,+,+, 679015 Satellite Satellite 585 chrUn_NT_469502v1 2921 3822 (CTCTATGGGG)n 637 - 2921 3822 0 4 287,182,178,117, 0,408,595,784, -,-,-,-, 679019 Satellite Satellite 585 chrUn_NT_469502v1 5019 5408 (GCCCCACAGCT)n 424 + 5019 5408 0 2 192,76, 0,313, +,+, 679024 Satellite Satellite 585 chrUn_NT_469504v1 710 1538 GGXHOI 385 - 710 1538 0 3 250,144,402, 0,264,426, -,-,-, 679036 Satellite W-chromosome 585 chrUn_NT_469504v1 1617 5727 GGXHOI 448 - 1617 5727 0 10 428,320,153,485,151,582,151,528,320,768, 0,447,780,949,1458,1672,2276,2438,2980,3342, -,-,-,-,-,-,-,-,-,-, 679037 Satellite W-chromosome 585 chrUn_NT_469504v1 6131 8370 GGXHOI 373 - 6131 8370 0 4 574,263,183,1109, 0,607,909,1130, -,-,-,-, 679039 Satellite W-chromosome 585 chrUn_NT_469504v1 8471 9772 GGXHOI 454 - 8471 9772 0 2 1109,150, 0,1151, -,-, 679040 Satellite W-chromosome 585 chrUn_NT_469505v1 3180 4568 GGLTR7-int 345 - 3180 4568 0 3 279,209,100, 0,1053,1288, -,-,-, 679043 LTR ERV1 585 chrUn_NT_469505v1 5295 7889 GGERVL-B-int 712 - 5295 7889 0 4 916,1068,56,209, 0,916,1986,2385, -,-,-,-, 679046 LTR ERVL 585 chrUn_NT_469506v1 629 1379 GGXHOI 418 - 629 1379 0 3 131,41,232, 0,147,518, -,-,-, 679052 Satellite W-chromosome 585 chrUn_NT_469506v1 1449 2570 GGXHOI 507 - 1449 2570 0 2 520,584, 0,537, -,-, 679054 Satellite W-chromosome 585 chrUn_NT_469506v1 2639 3500 GGXHOI 556 - 2639 3500 0 2 454,390, 0,471, -,-, 679055 Satellite W-chromosome 585 chrUn_NT_469506v1 3764 4849 GGXHOI 485 - 3764 4849 0 2 489,551, 0,534, -,-, 679057 Satellite W-chromosome 585 chrUn_NT_469506v1 4940 6054 GGXHOI 469 - 4940 6054 0 2 523,575, 0,539, -,-, 679058 Satellite W-chromosome 585 chrUn_NT_469506v1 6523 7545 GGXHOI 570 - 6523 7545 0 2 609,136, 0,886, -,-, 679060 Satellite W-chromosome 585 chrUn_NT_469506v1 7611 8172 GGXHOI 518 - 7611 8172 0 2 21,203, 0,358, -,-, 679062 Satellite W-chromosome 585 chrUn_NT_469506v1 8267 9843 GGXHOI 575 - 8267 9843 0 3 433,71,737, 0,451,839, -,-,-, 679064 Satellite W-chromosome 585 chrUn_NT_469507v1 8597 9411 Sat-CR1_GG 158 - 8597 9411 0 2 296,354, 0,460, -,-, 679072 Satellite Satellite 585 chrUn_NT_469507v1 9100 9853 GGXHOI 572 - 9100 9853 0 2 407,94, 0,659, -,-, 679074 Satellite W-chromosome 585 chrUn_NT_469509v1 1747 9851 GGXHOI 560 + 1747 9851 0 14 156,194,247,193,247,194,246,194,297,222,297,540,194,12, 0,601,1117,1809,2325,3019,3534,4227,4743,5435,5950,6644,7578,8092, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 679095 Satellite W-chromosome 585 chrUn_NT_469510v1 421 2276 GGXHOI 389 - 421 2276 0 2 803,1009, 0,846, -,-, 679110 Satellite W-chromosome 585 chrUn_NT_469510v1 9353 9870 GGXHOI 322 - 9353 9870 0 2 198,283, 0,234, -,-, 679120 Satellite W-chromosome 585 chrUn_NT_469512v1 5411 8780 GGXHOI 343 - 5411 8780 0 4 563,593,268,1897, 0,580,1191,1472, -,-,-,-, 679126 Satellite W-chromosome 585 chrUn_NT_469512v1 8899 9879 GGXHOI 319 - 8899 9879 0 2 206,714, 0,266, -,-, 679127 Satellite W-chromosome 585 chrUn_NT_469515v1 3021 5900 GGXHOI 531 - 3021 5900 0 3 323,1503,999, 0,365,1880, -,-,-, 679140 Satellite W-chromosome 585 chrUn_NT_469515v1 7391 8551 GGXHOI 530 - 7391 8551 0 2 522,614, 0,546, -,-, 679142 Satellite W-chromosome 585 chrUn_NT_469515v1 8632 9872 GGXHOI 519 - 8632 9872 0 3 539,452,146, 0,597,1094, -,-,-, 679143 Satellite W-chromosome 585 chrUn_NT_469516v1 4419 4874 (CCTTG)n 544 + 4419 4874 0 2 252,178, 0,277, +,+, 679148 Simple_repeat Simple_repeat 585 chrUn_NT_469516v1 5002 5333 (CCTTG)n 458 + 5002 5333 0 2 111,30, 0,301, +,+, 679150 Simple_repeat Simple_repeat 585 chrUn_NT_469516v1 5777 6974 (CAAGG)n 470 + 5777 6974 0 5 148,190,63,263,25, 0,170,615,726,1172, +,+,+,+,+, 679154 Simple_repeat Simple_repeat 585 chrUn_NT_469517v1 4990 6017 GGXHOI 360 + 4990 6017 0 4 212,464,91,144, 0,267,746,883, +,+,+,+, 679175 Satellite W-chromosome 585 chrUn_NT_469518v1 6034 9117 GGXHOI 395 - 6034 9117 0 3 644,884,1523, 0,655,1560, -,-,-, 679181 Satellite W-chromosome 585 chrUn_NT_469519v1 3664 4787 CR1-B2 715 - 3664 4787 0 2 895,225, 0,898, -,-, 679186 LINE CR1 585 chrUn_NT_469520v1 1206 1616 (CTCTATGGGG)n 400 - 1206 1616 0 2 235,134, 0,276, -,-, 679190 Satellite Satellite 585 chrUn_NT_469521v1 4953 5233 (ACCCATAGAG)n 620 + 4953 5233 0 2 95,57, 0,223, +,+, 679196 Satellite Satellite 585 chrUn_NT_469521v1 5866 6307 (ACCCCATAGGG)n 673 - 5866 6307 0 2 165,276, 0,165, -,-, 679203 Satellite Satellite 585 chrUn_NT_469523v1 3158 5684 GGXHOI 362 - 3158 5684 0 4 525,766,758,416, 0,540,1329,2110, -,-,-,-, 679227 Satellite W-chromosome 585 chrUn_NT_469523v1 5834 9853 GGXHOI 379 - 5834 9853 0 4 1492,897,767,786, 0,1530,2446,3233, -,-,-,-, 679228 Satellite W-chromosome 585 chrUn_NT_469525v1 2339 2496 CR1-H2 476 - 2339 2496 0 2 74,83, 0,74, -,-, 679234 LINE CR1 585 chrUn_NT_469525v1 3656 5067 CR1-H2 411 - 3656 5067 0 2 13,73, 0,1338, -,-, 679241 LINE CR1 585 chrUn_NT_469525v1 5774 6004 CR1-H2 485 - 5774 6004 0 3 74,82,74, 0,74,156, -,-,-, 679250 LINE CR1 585 chrUn_NT_469525v1 7569 7725 CR1-H2 476 - 7569 7725 0 2 74,82, 0,74, -,-, 679257 LINE CR1 585 chrUn_NT_469525v1 8003 8065 (G)n 874 + 8003 8065 0 2 17,27, 0,35, +,+, 679260 Simple_repeat Simple_repeat 585 chrUn_NT_469525v1 8304 8364 (G)n 917 + 8304 8364 0 2 17,26, 0,34, +,+, 679261 Simple_repeat Simple_repeat 585 chrUn_NT_469525v1 9011 9077 (G)n 871 + 9011 9077 0 2 19,29, 0,37, +,+, 679267 Simple_repeat Simple_repeat 585 chrUn_NT_469525v1 9698 9867 (G)n 859 + 9698 9867 0 3 18,32,38, 0,36,131, +,+,+, 679272 Simple_repeat Simple_repeat 585 chrUn_NT_469526v1 3498 4190 (CGAGG)n 528 + 3498 4190 0 2 504,175, 0,517, +,+, 679286 Simple_repeat Simple_repeat 585 chrUn_NT_469526v1 5449 5971 (CGAGG)n 526 + 5449 5971 0 2 321,24, 0,498, +,+, 679296 Simple_repeat Simple_repeat 585 chrUn_NT_469526v1 7999 8723 (CGAGG)n 518 + 7999 8723 0 3 318,175,182, 0,332,542, +,+,+, 679305 Simple_repeat Simple_repeat 585 chrUn_NT_469526v1 9158 9727 (CGAGG)n 501 + 9158 9727 0 2 363,184, 0,385, +,+, 679309 Simple_repeat Simple_repeat 585 chrUn_NT_469529v1 1459 3936 GGXHOI 381 - 1459 3936 0 3 236,320,1856, 0,260,621, -,-,-, 679328 Satellite W-chromosome 585 chrUn_NT_469531v1 2609 3003 (CCTCG)n 559 + 2609 3003 0 2 184,210, 0,184, +,+, 679345 Simple_repeat Simple_repeat 585 chrUn_NT_469531v1 3151 5238 (CCTCG)n 544 + 3151 5238 0 5 101,228,110,204,468, 0,446,936,1404,1619, +,+,+,+,+, 679348 Simple_repeat Simple_repeat 585 chrUn_NT_469531v1 6665 7996 (CCTCG)n 528 + 6665 7996 0 3 290,646,37, 0,471,1294, +,+,+, 679357 Simple_repeat Simple_repeat 585 chrUn_NT_469531v1 8447 9356 (CCTCG)n 531 + 8447 9356 0 3 491,184,186, 0,520,723, +,+,+, 679362 Simple_repeat Simple_repeat 585 chrUn_NT_469531v1 9425 9850 (CCTCG)n 511 + 9425 9850 0 2 234,172, 0,253, +,+, 679363 Simple_repeat Simple_repeat 585 chrUn_NT_469534v1 4113 5497 GGLTR7-int 331 - 4113 5497 0 3 279,228,100, 0,1054,1284, -,-,-, 679380 LTR ERV1 585 chrUn_NT_469534v1 6217 8677 GGERVL-B-int 791 - 6217 8677 0 3 923,1188,310, 0,962,2150, -,-,-, 679383 LTR ERVL 585 chrUn_NT_469535v1 2340 3157 GGLTR5A 392 + 2340 3157 0 2 218,118, 0,699, +,+, 679388 LTR ERVL 585 chrUn_NT_469535v1 5877 7863 CR1-C4 334 + 5877 7863 0 3 166,267,1553, 0,166,433, +,+,+, 679395 LINE CR1 585 chrUn_NT_469537v1 1569 2949 (CCTTG)n 612 + 1569 2949 0 5 495,43,220,220,176, 0,672,721,961,1204, +,+,+,+,+, 679406 Simple_repeat Simple_repeat 585 chrUn_NT_469537v1 3002 3439 (GCCTG)n 622 + 3002 3439 0 2 195,65, 0,372, +,+, 679409 Simple_repeat Simple_repeat 585 chrUn_NT_469537v1 3436 3959 (CCTTG)n 590 + 3436 3959 0 2 149,180, 0,343, +,+, 679411 Simple_repeat Simple_repeat 585 chrUn_NT_469538v1 2108 3493 GGLTR7-int 341 + 2108 3493 0 3 99,207,280, 0,125,1105, +,+,+, 679422 LTR ERV1 585 chrUn_NT_469539v1 321 1286 (TTAGGG)n 660 + 321 1286 0 5 94,13,28,199,237, 0,254,459,529,728, +,+,+,+,+, 679434 Simple_repeat Simple_repeat 585 chrUn_NT_469539v1 1304 2185 (TTAGGG)n 595 + 1304 2185 0 3 182,225,430, 0,218,451, +,+,+, 679438 Simple_repeat Simple_repeat 585 chrUn_NT_469539v1 2196 3476 (TTAGGG)n 585 + 2196 3476 0 3 350,504,212, 0,366,1068, +,+,+, 679440 Simple_repeat Simple_repeat 585 chrUn_NT_469539v1 4356 4954 (CCCTAA)n 556 + 4356 4954 0 2 178,396, 0,202, +,+, 679444 Simple_repeat Simple_repeat 585 chrUn_NT_469539v1 5041 6822 (CCCTAA)n 642 + 5041 6822 0 7 178,213,35,184,208,88,66, 0,236,984,1044,1228,1450,1715, +,+,+,+,+,+,+, 679446 Simple_repeat Simple_repeat 585 chrUn_NT_469541v1 1721 3827 GGXHOI 377 + 1721 3827 0 2 1046,997, 0,1109, +,+, 679461 Satellite W-chromosome 585 chrUn_NT_469541v1 5273 6279 GGXHOI 362 + 5273 6279 0 2 634,309, 0,697, +,+, 679465 Satellite W-chromosome 585 chrUn_NT_469543v1 1280 4115 GGERVL-B-int 717 - 1280 4115 0 2 909,1926, 0,909, -,-, 679477 LTR ERVL 585 chrUn_NT_469543v1 6642 7025 (CAAGG)n 572 + 6642 7025 0 2 182,201, 0,182, +,+, 679482 Simple_repeat Simple_repeat 585 chrUn_NT_469543v1 8145 8557 (CAAGG)n 566 + 8145 8557 0 2 117,120, 0,292, +,+, 679490 Simple_repeat Simple_repeat 585 chrUn_NT_469543v1 8577 9448 CR1-F0 861 + 8577 9448 0 2 737,134, 0,737, +,+, 679492 LINE CR1 585 chrUn_NT_469544v1 6399 7846 GGXHOI 500 - 6399 7846 0 2 1187,38, 0,1409, -,-, 679499 Satellite W-chromosome 585 chrUn_NT_469544v1 7915 9383 GGXHOI 502 - 7915 9383 0 2 987,284, 0,1184, -,-, 679501 Satellite W-chromosome 585 chrUn_NT_469546v1 1857 5358 GGXHOI 368 - 1857 5358 0 5 860,116,1699,141,553, 0,875,1031,2767,2948, -,-,-,-,-, 679506 Satellite W-chromosome 585 chrUn_NT_469546v1 5425 7632 GGXHOI 440 - 5425 7632 0 3 768,729,677, 0,779,1530, -,-,-, 679507 Satellite W-chromosome 585 chrUn_NT_469546v1 7818 9826 GGXHOI 389 - 7818 9826 0 3 172,678,1097, 0,217,911, -,-,-, 679508 Satellite W-chromosome 585 chrUn_NT_469548v1 7918 8479 GGXHOI 355 + 7918 8479 0 2 128,406, 0,155, +,+, 679521 Satellite W-chromosome 585 chrUn_NT_469549v1 3275 5816 GGXHOI 372 - 3275 5816 0 3 2054,215,191, 0,2074,2350, -,-,-, 679531 Satellite W-chromosome 585 chrUn_NT_469549v1 8295 9836 GGXHOI 369 - 8295 9836 0 2 724,797, 0,744, -,-, 679536 Satellite W-chromosome 585 chrUn_NT_469551v1 745 1554 GGXHOI 385 - 745 1554 0 2 270,521, 0,288, -,-, 679544 Satellite W-chromosome 585 chrUn_NT_469551v1 2889 3457 GGXHOI 421 - 2889 3457 0 2 270,280, 0,288, -,-, 679547 Satellite W-chromosome 585 chrUn_NT_469551v1 7677 8847 GGXHOI 433 - 7677 8847 0 3 424,267,444, 0,441,726, -,-,-, 679553 Satellite W-chromosome 585 chrUn_NT_469551v1 9011 9800 GGXHOI 387 - 9011 9800 0 2 260,510, 0,279, -,-, 679554 Satellite W-chromosome 585 chrUn_NT_469553v1 5570 8879 GGLTR7-int 401 + 5570 8879 0 4 91,1408,891,277, 0,539,2042,3032, +,+,+,+, 679570 LTR ERV1 585 chrUn_NT_469554v1 2208 2767 (CGAGG)n 525 + 2208 2767 0 2 181,363, 0,196, +,+, 679584 Simple_repeat Simple_repeat 585 chrUn_NT_469554v1 3002 4602 (CGAGG)n 457 + 3002 4602 0 4 530,207,455,185, 0,722,949,1415, +,+,+,+, 679585 Simple_repeat Simple_repeat 585 chrUn_NT_469554v1 4835 6636 (CGAGG)n 361 + 4835 6636 0 2 1136,651, 0,1150, +,+, 679588 Simple_repeat Simple_repeat 585 chrUn_NT_469554v1 7618 8783 (CGAGG)n 542 + 7618 8783 0 5 280,178,268,177,176, 0,298,476,758,989, +,+,+,+,+, 679591 Simple_repeat Simple_repeat 585 chrUn_NT_469554v1 9065 9493 (CGAGG)n 580 + 9065 9493 0 2 186,189, 0,239, +,+, 679593 Simple_repeat Simple_repeat 585 chrUn_NT_469555v1 2570 2732 (AACAACGGA)n 942 + 2570 2732 0 2 42,69, 0,93, +,+, 679599 Simple_repeat Simple_repeat 585 chrUn_NT_469556v1 4759 5600 GGLTR7-int 748 + 4759 5600 0 3 213,259,348, 0,234,493, +,+,+, 679619 LTR ERV1 585 chrUn_NT_469557v1 1536 2567 GGXHOI 311 - 1536 2567 0 2 564,440, 0,591, -,-, 679623 Satellite W-chromosome 585 chrUn_NT_469557v1 4303 5449 GGXHOI 320 - 4303 5449 0 2 514,578, 0,568, -,-, 679625 Satellite W-chromosome 585 chrUn_NT_469557v1 5615 6413 GGXHOI 331 - 5615 6413 0 3 298,263,178, 0,315,620, -,-,-, 679626 Satellite W-chromosome 585 chrUn_NT_469557v1 7990 8832 GGXHOI 340 - 7990 8832 0 2 548,276, 0,566, -,-, 679628 Satellite W-chromosome 585 chrUn_NT_469558v1 340 1470 GGXHOI 385 - 340 1470 0 2 430,678, 0,452, -,-, 679633 Satellite W-chromosome 585 chrUn_NT_469558v1 1558 2637 GGXHOI 358 - 1558 2637 0 2 133,929, 0,150, -,-, 679634 Satellite W-chromosome 585 chrUn_NT_469558v1 2873 5940 GGXHOI 388 - 2873 5940 0 6 1073,740,269,269,243,370, 0,1087,1843,2128,2413,2697, -,-,-,-,-,-, 679635 Satellite W-chromosome 585 chrUn_NT_469558v1 6033 6996 GGXHOI 364 - 6033 6996 0 3 339,112,438, 0,402,525, -,-,-, 679636 Satellite W-chromosome 585 chrUn_NT_469558v1 7440 8947 GGXHOI 360 - 7440 8947 0 3 823,387,211, 0,865,1296, -,-,-, 679638 Satellite W-chromosome 585 chrUn_NT_469559v1 1094 1921 (CCTTG)n 584 + 1094 1921 0 4 172,44,243,167, 0,356,400,660, +,+,+,+, 679644 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 2915 3558 (CCTTG)n 580 + 2915 3558 0 3 265,102,94, 0,265,549, +,+,+, 679652 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 3715 4125 (CCTTG)n 556 + 3715 4125 0 2 185,185, 0,225, +,+, 679655 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 4158 4567 (CCTTG)n 503 + 4158 4567 0 2 197,176, 0,233, +,+, 679657 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 4700 7548 (CCTTG)n 547 + 4700 7548 0 9 194,285,319,180,164,174,96,410,180, 0,231,695,1029,1226,1748,2100,2240,2668, +,+,+,+,+,+,+,+,+, 679659 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 7570 8166 (CCTTG)n 587 + 7570 8166 0 3 180,182,196, 0,207,400, +,+,+, 679665 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 8361 8873 (CCTTG)n 511 + 8361 8873 0 2 228,268, 0,244, +,+, 679668 Simple_repeat Simple_repeat 585 chrUn_NT_469559v1 9069 9455 (CCTTG)n 587 + 9069 9455 0 2 181,188, 0,198, +,+, 679669 Simple_repeat Simple_repeat 585 chrUn_NT_469563v1 9397 9496 (G)n 966 + 9397 9496 0 2 30,17, 0,82, +,+, 679693 Simple_repeat Simple_repeat 585 chrUn_NT_469566v1 6362 6648 GGXHOI 350 - 6362 6648 0 2 99,146, 0,140, -,-, 679705 Satellite W-chromosome 585 chrUn_NT_469566v1 6754 9780 GGXHOI 341 - 6754 9780 0 5 314,1442,431,228,485, 0,366,1824,2270,2541, -,-,-,-,-, 679706 Satellite W-chromosome 585 chrUn_NT_469570v1 8839 9368 (TTAGGG)n 469 + 8839 9368 0 2 321,160, 0,369, +,+, 679776 Simple_repeat Simple_repeat 585 chrUn_NT_469571v1 6639 9503 GGLTR7-int 396 + 6639 9503 0 4 110,1623,355,276, 0,110,1828,2588, +,+,+,+, 679787 LTR ERV1 585 chrUn_NT_469572v1 4554 4798 (TCCTC)n 748 + 4554 4798 0 2 21,173, 0,71, +,+, 679808 Simple_repeat Simple_repeat 585 chrUn_NT_469573v1 3005 3386 (GCGAG)n 354 + 3005 3386 0 2 86,236, 0,145, +,+, 679836 Simple_repeat Simple_repeat 585 chrUn_NT_469573v1 3437 4056 (CGAGG)n 503 + 3437 4056 0 2 206,392, 0,227, +,+, 679838 Simple_repeat Simple_repeat 585 chrUn_NT_469573v1 4924 5520 (CGAGG)n 513 + 4924 5520 0 3 181,177,173, 0,215,423, +,+,+, 679839 Simple_repeat Simple_repeat 585 chrUn_NT_469573v1 6706 6997 (CGAGG)n 379 + 6706 6997 0 2 175,62, 0,229, +,+, 679842 Simple_repeat Simple_repeat 585 chrUn_NT_469573v1 8950 9444 (GGCGA)n 254 + 8950 9444 0 2 102,312, 0,182, +,+, 679850 Simple_repeat Simple_repeat 585 chrUn_NT_469574v1 323 748 GGXHOI 425 - 323 748 0 2 267,143, 0,282, -,-, 679854 Satellite W-chromosome 585 chrUn_NT_469574v1 1364 2632 GGXHOI 310 - 1364 2632 0 5 219,436,165,153,143, 0,275,755,955,1125, -,-,-,-,-, 679856 Satellite W-chromosome 585 chrUn_NT_469574v1 3467 3949 GGXHOI 331 - 3467 3949 0 2 152,280, 0,202, -,-, 679859 Satellite W-chromosome 585 chrUn_NT_469574v1 4044 7438 GGXHOI 346 - 4044 7438 0 12 245,91,232,441,124,175,326,530,287,275,116,196, 0,258,364,627,1123,1297,1512,1864,2412,2741,3028,3198, -,-,-,-,-,-,-,-,-,-,-,-, 679860 Satellite W-chromosome 585 chrUn_NT_469574v1 7511 7873 GGXHOI 376 - 7511 7873 0 2 129,197, 0,165, -,-, 679861 Satellite W-chromosome 585 chrUn_NT_469574v1 8211 9381 GGXHOI 371 - 8211 9381 0 3 247,516,343, 0,290,827, -,-,-, 679863 Satellite W-chromosome 585 chrUn_NT_469575v1 1995 4134 GGXHOI 416 - 1995 4134 0 2 497,1598, 0,541, -,-, 679870 Satellite W-chromosome 585 chrUn_NT_469575v1 5388 9804 GGXHOI 364 - 5388 9804 0 6 765,2123,270,616,365,141, 0,781,2921,3251,3880,4275, -,-,-,-,-,-, 679874 Satellite W-chromosome 585 chrUn_NT_469577v1 2399 2876 (ACCCCATAGGG)n 631 + 2399 2876 0 3 132,118,162, 0,162,315, +,+,+, 679899 Satellite Satellite 585 chrUn_NT_469577v1 3150 4734 (ACCCCATAGGG)n 644 + 3150 4734 0 8 147,153,286,132,24,132,260,52, 0,186,382,804,936,1008,1140,1532, +,+,+,+,+,+,+,+, 679901 Satellite Satellite 585 chrUn_NT_469579v1 1168 1964 GGXHOI 393 - 1168 1964 0 2 486,294, 0,502, -,-, 679921 Satellite W-chromosome 585 chrUn_NT_469579v1 2294 5369 GGXHOI 334 - 2294 5369 0 8 194,378,273,558,138,260,625,374, 0,238,659,965,1571,1754,2028,2701, -,-,-,-,-,-,-,-, 679923 Satellite W-chromosome 585 chrUn_NT_469579v1 5871 6178 GGXHOI 439 - 5871 6178 0 2 215,75, 0,232, -,-, 679925 Satellite W-chromosome 585 chrUn_NT_469579v1 6460 9243 GGXHOI 377 - 6460 9243 0 7 140,131,135,697,1015,360,136, 0,155,303,477,1208,2271,2647, -,-,-,-,-,-,-, 679927 Satellite W-chromosome 585 chrUn_NT_469580v1 4881 7156 GGXHOI 554 - 4881 7156 0 2 359,677, 0,1598, -,-, 679934 Satellite W-chromosome 585 chrUn_NT_469580v1 7197 9047 GGXHOI 550 - 7197 9047 0 2 123,828, 0,1022, -,-, 679937 Satellite W-chromosome 585 chrUn_NT_469581v1 984 2725 GGXHOI 361 + 984 2725 0 6 291,318,93,366,303,253, 0,308,640,751,1168,1488, +,+,+,+,+,+, 679942 Satellite W-chromosome 585 chrUn_NT_469581v1 2979 6057 GGXHOI 375 + 2979 6057 0 2 245,2782, 0,296, +,+, 679943 Satellite W-chromosome 585 chrUn_NT_469581v1 6156 7693 GGXHOI 367 + 6156 7693 0 2 697,804, 0,733, +,+, 679944 Satellite W-chromosome 585 chrUn_NT_469581v1 7848 9788 GGXHOI 391 + 7848 9788 0 5 216,428,390,628,224, 0,230,675,1076,1716, +,+,+,+,+, 679945 Satellite W-chromosome 585 chrUn_NT_469582v1 1310 1876 (CAGGC)n 434 + 1310 1876 0 2 206,299, 0,267, +,+, 679953 Simple_repeat Simple_repeat 585 chrUn_NT_469582v1 2680 2898 (CAGGC)n 740 + 2680 2898 0 2 25,178, 0,40, +,+, 679958 Simple_repeat Simple_repeat 585 chrUn_NT_469582v1 2892 3301 (CAAGG)n 461 + 2892 3301 0 2 205,185, 0,224, +,+, 679959 Simple_repeat Simple_repeat 585 chrUn_NT_469582v1 3321 4095 (CAAGG)n 627 + 3321 4095 0 2 180,587, 0,187, +,+, 679961 Simple_repeat Simple_repeat 585 chrUn_NT_469582v1 3712 4563 (CAGGC)n 548 + 3712 4563 0 2 419,74, 0,777, +,+, 679962 Simple_repeat Simple_repeat 585 chrUn_NT_469583v1 3520 6843 GGXHOI 584 - 3520 6843 0 6 406,241,150,360,126,249, 0,785,1074,1781,2907,3074, -,-,-,-,-,-, 679973 Satellite W-chromosome 585 chrUn_NT_469583v1 8686 9754 GGXHOI 578 - 8686 9754 0 2 395,662, 0,406, -,-, 679980 Satellite W-chromosome 585 chrUn_NT_469584v1 651 1387 (CAAGG)n 525 + 651 1387 0 2 370,332, 0,404, +,+, 679986 Simple_repeat Simple_repeat 585 chrUn_NT_469584v1 1540 2164 (CCTTG)n 536 + 1540 2164 0 2 249,353, 0,271, +,+, 679988 Simple_repeat Simple_repeat 585 chrUn_NT_469584v1 2795 3064 (CAAGG)n 654 + 2795 3064 0 2 46,223, 0,46, +,+, 679994 Simple_repeat Simple_repeat 585 chrUn_NT_469584v1 5246 5608 (CAAGG)n 395 + 5246 5608 0 2 156,190, 0,172, +,+, 680003 Simple_repeat Simple_repeat 585 chrUn_NT_469584v1 6068 6897 (CCTTG)n 473 + 6068 6897 0 3 225,322,199, 0,286,630, +,+,+, 680006 Simple_repeat Simple_repeat 585 chrUn_NT_469584v1 7904 8257 (CCTTG)n 520 + 7904 8257 0 2 108,64, 0,289, +,+, 680009 Simple_repeat Simple_repeat 585 chrUn_NT_469584v1 8374 8694 (GCCTG)n 392 + 8374 8694 0 2 99,43, 0,277, +,+, 680011 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 571 1149 (CGAGG)n 441 + 571 1149 0 2 198,357, 0,221, +,+, 680104 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 1466 1837 (CGAGG)n 553 + 1466 1837 0 2 179,181, 0,190, +,+, 680106 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 2013 2808 (CGAGG)n 478 + 2013 2808 0 3 199,203,184, 0,381,611, +,+,+, 680108 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 4259 4909 (CGAGG)n 525 + 4259 4909 0 2 184,407, 0,243, +,+, 680116 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 4969 5484 (CGAGG)n 557 + 4969 5484 0 2 179,309, 0,206, +,+, 680118 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 5539 7110 (CGAGG)n 458 + 5539 7110 0 2 1287,101, 0,1470, +,+, 680120 Simple_repeat Simple_repeat 585 chrUn_NT_469589v1 7400 8573 (CGAGG)n 536 + 7400 8573 0 2 465,687, 0,486, +,+, 680124 Simple_repeat Simple_repeat 585 chrUn_NT_469590v1 1815 9786 GGXHOI 453 + 1815 9786 0 3 6246,513,1181, 0,6260,6790, +,+,+, 680131 Satellite W-chromosome 585 chrUn_NT_469591v1 8351 8420 (GGCCGCG)n 354 + 8351 8420 0 2 6,34, 0,35, +,+, 680136 Simple_repeat Simple_repeat 585 chrUn_NT_469592v1 1294 9790 GGXHOI 424 - 1294 9790 0 13 727,491,292,1062,606,103,549,273,1125,497,416,1506,597, 0,738,1243,1547,2631,3261,3379,3976,4264,5400,5912,6343,7899, -,-,-,-,-,-,-,-,-,-,-,-,-, 680142 Satellite W-chromosome 585 chrUn_NT_469593v1 3465 3801 GGXHOI 341 - 3465 3801 0 2 98,203, 0,133, -,-, 680146 Satellite W-chromosome 585 chrUn_NT_469593v1 4404 4712 GGXHOI 331 - 4404 4712 0 2 132,120, 0,188, -,-, 680148 Satellite W-chromosome 585 chrUn_NT_469593v1 6537 7864 GGXHOI 359 - 6537 7864 0 2 100,1207, 0,120, -,-, 680150 Satellite W-chromosome 585 chrUn_NT_469594v1 6847 8300 GGERVL-A-int 639 + 6847 8300 0 3 271,912,147, 0,383,1306, +,+,+, 680156 LTR ERVL 585 chrUn_NT_469595v1 136 2565 Z-REP 770 + 136 2565 0 2 153,1519, 0,910, +,+, 680160 Satellite macro 585 chrUn_NT_469596v1 547 4177 GGLTR11-int 262 + 547 4177 0 4 253,372,233,1409, 0,502,1082,2221, +,+,+,+, 680165 LTR ERV1 585 chrUn_NT_469597v1 4519 5554 GGXHOI 374 + 4519 5554 0 2 472,500, 0,535, +,+, 680180 Satellite W-chromosome 585 chrUn_NT_469598v1 152 6128 CR1-F 518 + 152 6128 0 18 155,199,191,198,200,201,203,156,193,90,190,198,203,203,203,155,187,208, 0,447,691,924,1419,1661,1904,2373,2819,3055,3284,3516,4011,4256,4501,4970,5415,5768, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 680188 LINE CR1 585 chrUn_NT_469598v1 6171 9776 CR1-F 546 + 6171 9776 0 12 203,204,203,154,201,191,199,203,203,203,155,66, 0,244,490,960,1404,1650,1883,2381,2625,2870,3339,3539, +,+,+,+,+,+,+,+,+,+,+,+, 680197 LINE CR1 585 chrUn_NT_469599v1 5815 6230 A-rich 484 + 5815 6230 0 2 342,38, 0,377, +,+, 680210 Low_complexity Low_complexity 585 chrUn_NT_469600v1 2550 4954 GGXHOI 421 - 2550 4954 0 4 196,243,1593,292, 0,233,503,2112, -,-,-,-, 680224 Satellite W-chromosome 585 chrUn_NT_469600v1 5528 8998 GGXHOI 413 - 5528 8998 0 3 893,611,1911, 0,929,1559, -,-,-, 680226 Satellite W-chromosome 585 chrUn_NT_469601v1 3792 4917 CR1-B2 690 - 3792 4917 0 2 898,224, 0,901, -,-, 680232 LINE CR1 585 chrUn_NT_469602v1 3298 3440 CR1-H2 504 + 3298 3440 0 2 69,73, 0,69, +,+, 680248 LINE CR1 585 chrUn_NT_469602v1 5580 7114 CR1-F2 457 + 5580 7114 0 2 85,74, 0,1460, +,+, 680253 LINE CR1 585 chrUn_NT_469603v1 1298 1767 (CCTTG)n 522 + 1298 1767 0 2 245,54, 0,415, +,+, 680268 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 2023 2514 (CCTTG)n 479 + 2023 2514 0 2 242,223, 0,268, +,+, 680272 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 3264 3860 (CAAGG)n 532 + 3264 3860 0 3 180,221,195, 0,180,401, +,+,+, 680278 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 3885 4308 (CCTTG)n 485 + 3885 4308 0 2 174,223, 0,200, +,+, 680279 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 4710 5597 (CAAGG)n 517 + 4710 5597 0 4 169,155,114,225, 0,186,522,662, +,+,+,+, 680284 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 5620 6518 (CCTTG)n 494 + 5620 6518 0 2 674,54, 0,844, +,+, 680286 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 6774 7266 (CCTTG)n 479 + 6774 7266 0 2 242,224, 0,268, +,+, 680290 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 7690 8613 (CAAGG)n 516 + 7690 8613 0 3 164,162,375, 0,343,548, +,+,+, 680294 Simple_repeat Simple_repeat 585 chrUn_NT_469603v1 8683 9056 (CCTTG)n 497 + 8683 9056 0 2 180,174, 0,199, +,+, 680296 Simple_repeat Simple_repeat 585 chrUn_NT_469606v1 7214 8267 GGXHOI 372 - 7214 8267 0 2 515,475, 0,578, -,-, 680318 Satellite W-chromosome 585 chrUn_NT_469608v1 4664 9033 GGXHOI 435 - 4664 9033 0 7 309,236,768,852,1567,186,319, 0,326,579,1363,2231,3818,4050, -,-,-,-,-,-,-, 680333 Satellite W-chromosome 585 chrUn_NT_469608v1 9129 9761 GGXHOI 375 - 9129 9761 0 2 250,335, 0,297, -,-, 680334 Satellite W-chromosome 585 chrUn_NT_469610v1 3590 4983 GGXHOI 367 - 3590 4983 0 2 293,1038, 0,355, -,-, 680340 Satellite W-chromosome 585 chrUn_NT_469610v1 6142 7111 GGXHOI 358 - 6142 7111 0 2 396,515, 0,454, -,-, 680342 Satellite W-chromosome 585 chrUn_NT_469611v1 1600 3823 GGXHOI 398 - 1600 3823 0 2 1232,978, 0,1245, -,-, 680348 Satellite W-chromosome 585 chrUn_NT_469611v1 3908 7001 GGXHOI 408 - 3908 7001 0 8 359,144,147,680,142,406,587,398, 0,414,577,739,1477,1639,2089,2695, -,-,-,-,-,-,-,-, 680349 Satellite W-chromosome 585 chrUn_NT_469611v1 7936 9728 GGXHOI 395 - 7936 9728 0 4 816,442,146,311, 0,866,1321,1481, -,-,-,-, 680351 Satellite W-chromosome 585 chrUn_NT_469616v1 3967 5611 GGXHOI 362 - 3967 5611 0 2 557,1069, 0,575, -,-, 680434 Satellite W-chromosome 585 chrUn_NT_469616v1 5779 8969 GGXHOI 355 - 5779 8969 0 3 558,1255,1342, 0,576,1848, -,-,-, 680435 Satellite W-chromosome 585 chrUn_NT_469617v1 602 3242 GGLTR3F1 915 + 602 3242 0 2 2147,493, 0,2147, +,+, 680438 LTR ERVL 585 chrUn_NT_469617v1 3235 9196 GGXHOI 470 - 3235 9196 0 5 305,266,1556,1425,2293, 0,368,650,2228,3668, -,-,-,-,-, 680439 Satellite W-chromosome 585 chrUn_NT_469617v1 9345 9708 GGXHOI 261 - 9345 9708 0 2 143,179, 0,184, -,-, 680440 Satellite W-chromosome 585 chrUn_NT_469620v1 2739 3789 GGXHOI 401 - 2739 3789 0 3 291,563,137, 0,305,913, -,-,-, 680455 Satellite W-chromosome 585 chrUn_NT_469620v1 4964 6374 GGXHOI 354 - 4964 6374 0 2 279,1078, 0,332, -,-, 680458 Satellite W-chromosome 585 chrUn_NT_469620v1 6912 7735 GGXHOI 376 - 6912 7735 0 4 143,138,361,132, 0,157,312,691, -,-,-,-, 680460 Satellite W-chromosome 585 chrUn_NT_469620v1 7871 9704 GGXHOI 386 - 7871 9704 0 5 468,320,274,142,563, 0,491,828,1113,1270, -,-,-,-,-, 680461 Satellite W-chromosome 585 chrUn_NT_469621v1 2043 5573 GGXHOI 338 - 2043 5573 0 13 127,130,254,259,119,236,160,463,664,124,164,362,176, 0,139,282,553,824,956,1207,1394,1871,2586,2748,2956,3354, -,-,-,-,-,-,-,-,-,-,-,-,-, 680463 Satellite W-chromosome 585 chrUn_NT_469621v1 5659 9745 GGXHOI 412 - 5659 9745 0 8 130,1607,137,325,196,473,622,405, 0,185,1822,1973,2315,2527,3034,3681, -,-,-,-,-,-,-,-, 680464 Satellite W-chromosome 585 chrUn_NT_469622v1 1328 9520 GGXHOI 590 - 1328 9520 0 10 1103,19,412,436,433,30,204,146,425,837, 0,1114,1930,3027,4147,5266,5333,5548,6373,7355, -,-,-,-,-,-,-,-,-,-, 680468 Satellite W-chromosome 585 chrUn_NT_469624v1 2421 2642 (CTCTATGGGG)n 612 + 2421 2642 0 2 72,30, 0,191, +,+, 680488 Satellite Satellite 585 chrUn_NT_469624v1 2628 3023 (ACCCATAGAG)n 589 - 2628 3023 0 2 242,116, 0,279, -,-, 680490 Satellite Satellite 585 chrUn_NT_469624v1 3444 4017 (ACCCATAGAG)n 613 - 3444 4017 0 4 87,72,63,63, 0,118,318,510, -,-,-,-, 680493 Satellite Satellite 585 chrUn_NT_469624v1 4224 4726 (ACCCATAGAG)n 572 - 4224 4726 0 2 216,28, 0,474, -,-, 680497 Satellite Satellite 585 chrUn_NT_469624v1 4579 4842 (ACCCATAGAG)n 422 - 4579 4842 0 2 119,55, 0,208, -,-, 680499 Satellite Satellite 585 chrUn_NT_469624v1 5094 5750 (ACCCATAGAG)n 553 - 5094 5750 0 2 131,499, 0,157, -,-, 680502 Satellite Satellite 585 chrUn_NT_469624v1 5914 6266 (ACCCATAGAG)n 656 - 5914 6266 0 2 151,84, 0,268, -,-, 680503 Satellite Satellite 585 chrUn_NT_469624v1 6278 6591 (ACCCATAGAG)n 706 + 6278 6591 0 2 170,143, 0,170, +,+, 680505 Satellite Satellite 585 chrUn_NT_469624v1 6776 7351 (ACCCATAGAG)n 604 - 6776 7351 0 2 211,134, 0,441, -,-, 680507 Satellite Satellite 585 chrUn_NT_469625v1 1383 1507 (TTTTC)n 352 + 1383 1507 0 2 85,11, 0,113, +,+, 680517 Simple_repeat Simple_repeat 585 chrUn_NT_469626v1 1422 2473 GGXHOI 392 + 1422 2473 0 2 472,516, 0,535, +,+, 680532 Satellite W-chromosome 585 chrUn_NT_469627v1 3597 4378 CR1-H 486 + 3597 4378 0 2 488,232, 0,549, +,+, 680546 LINE CR1 585 chrUn_NT_469628v1 2278 2922 (CAAGG)n 624 + 2278 2922 0 3 181,180,230, 0,204,414, +,+,+, 680560 Simple_repeat Simple_repeat 585 chrUn_NT_469628v1 2998 4298 (CAAGG)n 577 + 2998 4298 0 5 195,179,105,209,386, 0,211,390,682,914, +,+,+,+,+, 680562 Simple_repeat Simple_repeat 585 chrUn_NT_469628v1 4878 6471 (CAAGG)n 626 + 4878 6471 0 5 539,245,160,187,213, 0,561,822,1161,1380, +,+,+,+,+, 680569 Simple_repeat Simple_repeat 585 chrUn_NT_469628v1 6533 7384 (CAAGG)n 617 + 6533 7384 0 2 317,258, 0,593, +,+, 680572 Simple_repeat Simple_repeat 585 chrUn_NT_469628v1 7399 8139 (CAAGG)n 588 + 7399 8139 0 2 167,421, 0,319, +,+, 680575 Simple_repeat Simple_repeat 585 chrUn_NT_469628v1 8403 8912 (CAAGG)n 632 + 8403 8912 0 2 260,62, 0,447, +,+, 680580 Simple_repeat Simple_repeat 585 chrUn_NT_469628v1 8956 9730 (CAAGG)n 620 + 8956 9730 0 3 183,389,202, 0,183,572, +,+,+, 680583 Simple_repeat Simple_repeat 585 chrUn_NT_469629v1 197 8572 GGXHOI 542 + 197 8572 0 14 297,194,297,239,253,193,370,186,380,195,371,311,304,521, 0,694,1211,1783,2332,3031,3547,4248,4746,5446,5963,6529,7155,7854, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 680585 Satellite W-chromosome 585 chrUn_NT_469629v1 8647 9730 GGXHOI 442 + 8647 9730 0 2 492,280, 0,803, +,+, 680599 Satellite W-chromosome 585 chrUn_NT_469630v1 2862 3289 GGLTR7A 898 - 2862 3289 0 2 253,174, 0,253, -,-, 680603 LTR ERV1 585 chrUn_NT_469630v1 4144 4536 (CAGGC)n 554 + 4144 4536 0 2 185,207, 0,185, +,+, 680610 Simple_repeat Simple_repeat 585 chrUn_NT_469630v1 4585 4989 (CAAGG)n 504 + 4585 4989 0 2 171,52, 0,352, +,+, 680611 Simple_repeat Simple_repeat 585 chrUn_NT_469630v1 6761 7075 (CAGGC)n 437 + 6761 7075 0 2 97,217, 0,97, +,+, 680629 Simple_repeat Simple_repeat 585 chrUn_NT_469630v1 7450 7808 (CAAGG)n 582 + 7450 7808 0 2 90,80, 0,278, +,+, 680633 Simple_repeat Simple_repeat 585 chrUn_NT_469630v1 7834 8381 (CAAGG)n 578 + 7834 8381 0 2 136,228, 0,319, +,+, 680636 Simple_repeat Simple_repeat 585 chrUn_NT_469631v1 1975 2358 CR1-C4 532 + 1975 2358 0 2 53,240, 0,143, +,+, 680642 LINE CR1 585 chrUn_NT_469631v1 7215 8084 CR1-C 873 + 7215 8084 0 2 448,421, 0,448, +,+, 680648 LINE CR1 585 chrUn_NT_469633v1 1602 9702 GGXHOI 360 - 1602 9702 0 6 154,1181,686,4392,432,1065, 0,206,1450,2147,6592,7035, -,-,-,-,-,-, 680658 Satellite W-chromosome 585 chrUn_NT_469634v1 2578 4196 GGXHOI 377 - 2578 4196 0 2 556,1044, 0,574, -,-, 680660 Satellite W-chromosome 585 chrUn_NT_469634v1 4378 7744 GGXHOI 364 - 4378 7744 0 2 555,2793, 0,573, -,-, 680661 Satellite W-chromosome 585 chrUn_NT_469635v1 1171 1818 GGXHOI 347 - 1171 1818 0 3 211,127,275, 0,231,372, -,-,-, 680664 Satellite W-chromosome 585 chrUn_NT_469635v1 2257 2715 GGXHOI 373 - 2257 2715 0 2 150,294, 0,164, -,-, 680666 Satellite W-chromosome 585 chrUn_NT_469635v1 2835 3777 GGXHOI 384 - 2835 3777 0 2 438,482, 0,460, -,-, 680667 Satellite W-chromosome 585 chrUn_NT_469635v1 4076 9657 GGXHOI 377 - 4076 9657 0 3 5005,221,270, 0,5027,5311, -,-,-, 680668 Satellite W-chromosome 585 chrUn_NT_469638v1 6070 9252 GGERV10_LTR 910 - 6070 9252 0 2 222,2960, 0,222, -,-, 680675 LTR ERVL 585 chrUn_NT_469640v1 8096 9717 GGLTR7-int 546 + 8096 9717 0 2 338,804, 0,817, +,+, 680700 LTR ERV1 585 chrUn_NT_469641v1 4448 4795 (ACCCCATAGGG)n 330 + 4448 4795 0 2 143,141, 0,206, +,+, 680710 Satellite Satellite 585 chrUn_NT_469641v1 5904 6226 (ACCCCATAGGG)n 311 + 5904 6226 0 2 142,140, 0,182, +,+, 680715 Satellite Satellite 585 chrUn_NT_469644v1 7496 7621 (GGAGT)n 306 + 7496 7621 0 2 77,6, 0,119, +,+, 680760 Simple_repeat Simple_repeat 585 chrUn_NT_469645v1 3923 8893 ENS3-int 819 - 3923 8893 0 2 821,4149, 0,821, -,-, 680774 LTR ERVL 585 chrUn_NT_469647v1 1269 2648 (CGAGG)n 582 + 1269 2648 0 5 197,69,367,215,161, 0,375,455,834,1218, +,+,+,+,+, 680801 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 2753 3278 (CGAGG)n 640 + 2753 3278 0 2 272,74, 0,451, +,+, 680806 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 3342 3738 (CGAGG)n 637 + 3342 3738 0 2 184,182, 0,214, +,+, 680809 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 4058 5857 (CGAGG)n 578 + 4058 5857 0 6 185,250,188,336,126,382, 0,208,520,741,1264,1417, +,+,+,+,+,+, 680813 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 5873 6462 (CGAGG)n 582 + 5873 6462 0 2 186,378, 0,211, +,+, 680816 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 6563 7072 (CGAGG)n 609 + 6563 7072 0 2 184,316, 0,193, +,+, 680817 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 7214 9164 (CGAGG)n 590 + 7214 9164 0 5 237,137,289,376,178, 0,742,1053,1372,1772, +,+,+,+,+, 680819 Simple_repeat Simple_repeat 585 chrUn_NT_469647v1 9234 9655 (CGAGG)n 588 + 9234 9655 0 2 208,185, 0,236, +,+, 680823 Simple_repeat Simple_repeat 585 chrUn_NT_469648v1 3278 3547 (CCCCATTGGG)n 544 - 3278 3547 0 2 111,118, 0,151, -,-, 680827 Satellite Satellite 585 chrUn_NT_469648v1 3625 4146 (CCCCATTGGG)n 557 - 3625 4146 0 3 114,229,110, 0,127,411, -,-,-, 680828 Satellite Satellite 585 chrUn_NT_469648v1 4696 4950 (CCCCATTGGG)n 583 - 4696 4950 0 2 110,113, 0,141, -,-, 680830 Satellite Satellite 585 chrUn_NT_469648v1 5289 6224 (ACCCATAGGG)n 710 + 5289 6224 0 3 179,123,323, 0,247,612, +,+,+, 680831 Satellite Satellite 585 chrUn_NT_469648v1 5730 6244 (ACCCATAGAG)n 742 + 5730 6244 0 2 316,79, 0,435, +,+, 680834 Satellite Satellite 585 chrUn_NT_469648v1 6531 6934 (ACCCATAGGG)n 740 + 6531 6934 0 2 122,50, 0,353, +,+, 680838 Satellite Satellite 585 chrUn_NT_469649v1 2320 3587 CR1-H 581 + 2320 3587 0 2 1156,111, 0,1156, +,+, 680846 LINE CR1 585 chrUn_NT_469649v1 5445 6072 CR1-H 684 + 5445 6072 0 2 469,139, 0,488, +,+, 680849 LINE CR1 585 chrUn_NT_469650v1 1532 2121 GGXHOI 385 - 1532 2121 0 2 387,143, 0,446, -,-, 680855 Satellite W-chromosome 585 chrUn_NT_469650v1 2205 3154 GGXHOI 337 - 2205 3154 0 2 670,262, 0,687, -,-, 680856 Satellite W-chromosome 585 chrUn_NT_469650v1 4470 5370 (CAAGG)n 480 + 4470 5370 0 2 229,564, 0,336, +,+, 680859 Simple_repeat Simple_repeat 585 chrUn_NT_469650v1 5642 6244 (CCTTG)n 442 + 5642 6244 0 2 337,221, 0,381, +,+, 680862 Simple_repeat Simple_repeat 585 chrUn_NT_469650v1 6826 7729 (CCTTG)n 534 + 6826 7729 0 2 301,598, 0,305, +,+, 680865 Simple_repeat Simple_repeat 585 chrUn_NT_469650v1 8146 8678 (CAAGG)n 598 + 8146 8678 0 3 46,223,246, 0,46,286, +,+,+, 680869 Simple_repeat Simple_repeat 585 chrUn_NT_469650v1 8932 9577 (CAAGG)n 496 + 8932 9577 0 3 229,135,156, 0,336,489, +,+,+, 680872 Simple_repeat Simple_repeat 585 chrUn_NT_469651v1 1961 3630 GGXHOI 354 - 1961 3630 0 3 407,781,412, 0,460,1257, -,-,-, 680878 Satellite W-chromosome 585 chrUn_NT_469651v1 5215 5977 GGXHOI 399 - 5215 5977 0 2 458,264, 0,498, -,-, 680882 Satellite W-chromosome 585 chrUn_NT_469651v1 6909 8606 GGXHOI 405 - 6909 8606 0 2 1010,669, 0,1028, -,-, 680884 Satellite W-chromosome 585 chrUn_NT_469653v1 121 1985 (CAGGC)n 522 + 121 1985 0 6 271,43,82,13,18,463, 0,454,686,949,1201,1401, +,+,+,+,+,+, 680896 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 1565 2426 (CAAGG)n 482 + 1565 2426 0 2 275,251, 0,610, +,+, 680902 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 2580 2996 (CAAGG)n 673 + 2580 2996 0 2 228,188, 0,228, +,+, 680908 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 3073 3761 (CAAGG)n 714 + 3073 3761 0 3 180,191,209, 0,239,479, +,+,+, 680910 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 3772 4494 (CAAGG)n 636 + 3772 4494 0 3 204,39,197, 0,478,525, +,+,+, 680912 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 6090 6596 (CAAGG)n 536 + 6090 6596 0 2 188,140, 0,366, +,+, 680925 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 7014 7584 (CAAGG)n 501 + 7014 7584 0 2 248,300, 0,270, +,+, 680930 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 7734 8930 (CAAGG)n 624 + 7734 8930 0 4 246,275,122,181, 0,286,853,1015, +,+,+,+, 680933 Simple_repeat Simple_repeat 585 chrUn_NT_469653v1 8973 9492 (CAAGG)n 646 + 8973 9492 0 2 177,342, 0,177, +,+, 680938 Simple_repeat Simple_repeat 585 chrUn_NT_469654v1 2397 5332 GGERV20_I-int 815 + 2397 5332 0 3 1718,932,218, 0,1785,2717, +,+,+, 680942 LTR ERVL 585 chrUn_NT_469656v1 1834 4265 GGLTR7-int 592 - 1834 4265 0 2 789,336, 0,2095, -,-, 680951 LTR ERV1 585 chrUn_NT_469656v1 7276 7514 G-rich 448 + 7276 7514 0 2 45,143, 0,95, +,+, 680959 Low_complexity Low_complexity 585 chrUn_NT_469657v1 6977 7392 CR1-Y 728 + 6977 7392 0 2 34,381, 0,34, +,+, 680970 LINE CR1 585 chrUn_NT_469659v1 3696 4320 CR1-H 684 - 3696 4320 0 2 138,467, 0,157, -,-, 680982 LINE CR1 585 chrUn_NT_469659v1 6455 6909 CR1-H 664 - 6455 6909 0 2 162,292, 0,162, -,-, 680986 LINE CR1 585 chrUn_NT_469660v1 1591 2406 GGXHOI 330 + 1591 2406 0 3 149,299,321, 0,180,494, +,+,+, 680993 Satellite W-chromosome 585 chrUn_NT_469660v1 2802 3546 GGXHOI 364 + 2802 3546 0 3 320,106,235, 0,359,509, +,+,+, 680995 Satellite W-chromosome 585 chrUn_NT_469660v1 3636 6094 GGXHOI 405 + 3636 6094 0 7 298,533,172,437,193,418,243, 0,313,897,1114,1568,1772,2215, +,+,+,+,+,+,+, 680996 Satellite W-chromosome 585 chrUn_NT_469660v1 6465 7838 GGXHOI 412 + 6465 7838 0 4 420,137,426,276, 0,463,654,1097, +,+,+,+, 680998 Satellite W-chromosome 585 chrUn_NT_469660v1 7911 9361 GGXHOI 448 + 7911 9361 0 8 177,53,295,221,160,188,85,132, 0,195,263,596,832,1017,1220,1318, +,+,+,+,+,+,+,+, 680999 Satellite W-chromosome 585 chrUn_NT_469666v1 2802 5213 GGXHOI 417 - 2802 5213 0 4 138,134,1170,831, 0,191,378,1580, -,-,-,-, 681029 Satellite W-chromosome 585 chrUn_NT_469666v1 5314 8390 GGXHOI 437 - 5314 8390 0 3 1557,1055,426, 0,1573,2650, -,-,-, 681030 Satellite W-chromosome 585 chrUn_NT_469666v1 8607 9677 GGXHOI 436 - 8607 9677 0 2 871,178, 0,892, -,-, 681031 Satellite W-chromosome 585 chrUn_NT_469667v1 3657 8089 GGLTR11 572 + 3657 8089 0 2 86,41, 0,4391, +,+, 681033 LTR ERV1 585 chrUn_NT_469667v1 4096 7095 GGLTR7-int 382 + 4096 7095 0 5 115,40,431,978,276, 0,115,1216,1699,2723, +,+,+,+,+, 681034 LTR ERV1 585 chrUn_NT_469669v1 6722 7959 (CCTTG)n 550 + 6722 7959 0 2 117,251, 0,986, +,+, 681053 Simple_repeat Simple_repeat 585 chrUn_NT_469669v1 6839 7708 (GCCTG)n 515 + 6839 7708 0 2 485,384, 0,485, +,+, 681054 Simple_repeat Simple_repeat 585 chrUn_NT_469669v1 8683 8920 (CCTTG)n 424 + 8683 8920 0 2 25,188, 0,49, +,+, 681060 Simple_repeat Simple_repeat 585 chrUn_NT_469669v1 9005 9586 (CCTTG)n 480 + 9005 9586 0 2 190,49, 0,532, +,+, 681063 Simple_repeat Simple_repeat 585 chrUn_NT_469670v1 873 2469 GGXHOI 410 - 873 2469 0 4 121,787,232,377, 0,152,966,1219, -,-,-,-, 681068 Satellite W-chromosome 585 chrUn_NT_469670v1 3583 5152 GGXHOI 336 - 3583 5152 0 5 581,178,318,249,167, 0,612,804,1133,1402, -,-,-,-,-, 681070 Satellite W-chromosome 585 chrUn_NT_469670v1 5341 7991 GGXHOI 403 - 5341 7991 0 3 1682,759,134, 0,1694,2516, -,-,-, 681071 Satellite W-chromosome 585 chrUn_NT_469670v1 8062 9604 GGXHOI 368 - 8062 9604 0 4 621,284,57,543, 0,632,929,999, -,-,-,-, 681072 Satellite W-chromosome 585 chrUn_NT_469671v1 43 498 (CGAGG)n 545 + 43 498 0 2 264,177, 0,278, +,+, 681074 Simple_repeat Simple_repeat 585 chrUn_NT_469671v1 1245 1872 (CGAGG)n 565 + 1245 1872 0 3 177,209,184, 0,194,443, +,+,+, 681080 Simple_repeat Simple_repeat 585 chrUn_NT_469671v1 2492 3249 (CGAGG)n 499 + 2492 3249 0 3 179,179,358, 0,208,399, +,+,+, 681085 Simple_repeat Simple_repeat 585 chrUn_NT_469671v1 4488 5067 (CGAGG)n 481 + 4488 5067 0 2 293,264, 0,315, +,+, 681090 Simple_repeat Simple_repeat 585 chrUn_NT_469671v1 5138 6579 (CGAGG)n 578 + 5138 6579 0 2 184,1250, 0,191, +,+, 681092 Simple_repeat Simple_repeat 585 chrUn_NT_469671v1 7574 8827 (CGAGG)n 550 + 7574 8827 0 2 168,904, 0,349, +,+, 681098 Simple_repeat Simple_repeat 585 chrUn_NT_469671v1 9079 9664 (CGAGG)n 542 + 9079 9664 0 2 178,387, 0,198, +,+, 681102 Simple_repeat Simple_repeat 585 chrUn_NT_469674v1 262 7672 GGXHOI 388 - 262 7672 0 11 415,333,1611,156,791,1147,655,607,923,301,293, 0,434,781,2408,2581,3388,4554,5230,5860,6798,7117, -,-,-,-,-,-,-,-,-,-,-, 681120 Satellite W-chromosome 585 chrUn_NT_469674v1 7891 9588 GGXHOI 420 - 7891 9588 0 2 414,1260, 0,437, -,-, 681121 Satellite W-chromosome 585 chrUn_NT_469675v1 6463 7023 CR1-C2 660 - 6463 7023 0 2 48,512, 0,48, -,-, 681128 LINE CR1 585 chrUn_NT_469677v1 8752 9629 CR1-B2 548 - 8752 9629 0 2 655,219, 0,658, -,-, 681141 LINE CR1 585 chrUn_NT_469678v1 1600 4457 GGXHOI 514 - 1600 4457 0 2 1852,727, 0,2130, -,-, 681145 Satellite W-chromosome 585 chrUn_NT_469678v1 4523 6284 GGXHOI 564 - 4523 6284 0 2 373,1165, 0,596, -,-, 681147 Satellite W-chromosome 585 chrUn_NT_469678v1 6349 6842 GGXHOI 472 - 6349 6842 0 2 214,217, 0,276, -,-, 681149 Satellite W-chromosome 585 chrUn_NT_469678v1 6925 8292 GGXHOI 578 - 6925 8292 0 2 1028,46, 0,1321, -,-, 681150 Satellite W-chromosome 585 chrUn_NT_469679v1 7629 9394 GGERVL-A-int 687 - 7629 9394 0 2 1298,467, 0,1298, -,-, 681161 LTR ERVL 585 chrUn_NT_469681v1 466 1407 (ACCCCATAGGG)n 293 - 466 1407 0 4 194,246,229,141, 0,234,515,800, -,-,-,-, 681183 Satellite Satellite 585 chrUn_NT_469681v1 1576 2464 (ACCCCATAGGG)n 347 - 1576 2464 0 3 199,266,354, 0,233,534, -,-,-, 681184 Satellite Satellite 585 chrUn_NT_469681v1 2635 2860 (ACCCCATAGGG)n 359 - 2635 2860 0 2 97,96, 0,129, -,-, 681186 Satellite Satellite 585 chrUn_NT_469681v1 3253 3780 (ACCCCATAGGG)n 360 - 3253 3780 0 2 120,374, 0,153, -,-, 681189 Satellite Satellite 585 chrUn_NT_469681v1 3942 4427 (ACCCCATAGGG)n 399 - 3942 4427 0 3 97,205,116, 0,129,369, -,-,-, 681191 Satellite Satellite 585 chrUn_NT_469681v1 4493 4809 (ACCCCATAGGG)n 370 - 4493 4809 0 2 164,119, 0,197, -,-, 681192 Satellite Satellite 585 chrUn_NT_469683v1 1188 1897 (CGAGG)n 488 + 1188 1897 0 3 147,31,316, 0,321,393, +,+,+, 681207 Simple_repeat Simple_repeat 585 chrUn_NT_469683v1 2388 3080 (CGAGG)n 459 + 2388 3080 0 2 353,319, 0,373, +,+, 681210 Simple_repeat Simple_repeat 585 chrUn_NT_469683v1 3186 3718 (CGAGG)n 492 + 3186 3718 0 2 170,342, 0,190, +,+, 681211 Simple_repeat Simple_repeat 585 chrUn_NT_469683v1 4047 4665 (CGAGG)n 539 + 4047 4665 0 3 178,178,186, 0,238,432, +,+,+, 681213 Simple_repeat Simple_repeat 585 chrUn_NT_469683v1 4954 5321 (CGAGG)n 422 + 4954 5321 0 2 156,191, 0,176, +,+, 681215 Simple_repeat Simple_repeat 585 chrUn_NT_469683v1 5666 6081 (CGAGG)n 451 + 5666 6081 0 2 179,223, 0,192, +,+, 681217 Simple_repeat Simple_repeat 585 chrUn_NT_469683v1 8065 8822 (CGAGG)n 515 + 8065 8822 0 2 364,366, 0,391, +,+, 681229 Simple_repeat Simple_repeat 585 chrUn_NT_469685v1 4459 4894 (CAGGC)n 664 + 4459 4894 0 3 25,177,43, 0,25,392, +,+,+, 681255 Simple_repeat Simple_repeat 585 chrUn_NT_469685v1 6279 6640 (CCTTT)n 408 + 6279 6640 0 2 39,6, 0,355, +,+, 681258 Simple_repeat Simple_repeat 585 chrUn_NT_469686v1 3199 5795 GGXHOI 385 - 3199 5795 0 3 1553,352,660, 0,1571,1936, -,-,-, 681266 Satellite W-chromosome 585 chrUn_NT_469686v1 6349 8247 GGXHOI 367 - 6349 8247 0 3 252,970,620, 0,263,1278, -,-,-, 681268 Satellite W-chromosome 585 chrUn_NT_469689v1 1795 2918 CR1-B2 700 + 1795 2918 0 2 223,897, 0,226, +,+, 681283 LINE CR1 585 chrUn_NT_469689v1 7735 8042 CR1-X 505 + 7735 8042 0 3 171,76,50, 0,171,257, +,+,+, 681290 LINE CR1 585 chrUn_NT_469690v1 636 1200 GGXHOI 387 - 636 1200 0 2 209,339, 0,225, -,-, 681294 Satellite W-chromosome 585 chrUn_NT_469690v1 1275 1729 GGXHOI 364 - 1275 1729 0 2 282,134, 0,320, -,-, 681295 Satellite W-chromosome 585 chrUn_NT_469690v1 1817 2118 GGXHOI 232 - 1817 2118 0 2 154,131, 0,170, -,-, 681296 Satellite W-chromosome 585 chrUn_NT_469690v1 2190 2830 GGXHOI 333 - 2190 2830 0 2 281,344, 0,296, -,-, 681297 Satellite W-chromosome 585 chrUn_NT_469690v1 2915 4706 GGXHOI 385 - 2915 4706 0 7 266,423,129,321,140,138,216, 0,282,720,898,1231,1383,1575, -,-,-,-,-,-,-, 681298 Satellite W-chromosome 585 chrUn_NT_469690v1 4778 6283 GGXHOI 337 - 4778 6283 0 5 137,335,356,396,150, 0,152,534,937,1355, -,-,-,-,-, 681299 Satellite W-chromosome 585 chrUn_NT_469690v1 6384 7831 GGXHOI 302 - 6384 7831 0 7 124,225,198,162,315,91,135, 0,135,372,627,841,1182,1312, -,-,-,-,-,-,-, 681300 Satellite W-chromosome 585 chrUn_NT_469690v1 8883 9414 GGXHOI 362 - 8883 9414 0 2 344,144, 0,387, -,-, 681304 Satellite W-chromosome 585 chrUn_NT_469692v1 1263 1666 (CGAGG)n 549 + 1263 1666 0 2 183,185, 0,218, +,+, 681310 Simple_repeat Simple_repeat 585 chrUn_NT_469692v1 1735 2911 (CGAGG)n 542 + 1735 2911 0 4 184,359,319,228, 0,199,609,948, +,+,+,+, 681312 Simple_repeat Simple_repeat 585 chrUn_NT_469692v1 4035 5287 (CGAGG)n 535 + 4035 5287 0 4 180,402,184,450, 0,180,602,802, +,+,+,+, 681318 Simple_repeat Simple_repeat 585 chrUn_NT_469692v1 5367 5948 (CGAGG)n 530 + 5367 5948 0 2 187,353, 0,228, +,+, 681321 Simple_repeat Simple_repeat 585 chrUn_NT_469692v1 9260 9642 (CGAGG)n 503 + 9260 9642 0 2 187,179, 0,203, +,+, 681336 Simple_repeat Simple_repeat 585 chrUn_NT_469694v1 5406 5629 (GCCCCACAGCT)n 414 - 5406 5629 0 2 85,99, 0,124, -,-, 681347 Satellite Satellite 585 chrUn_NT_469697v1 6991 7637 (CCCCATTGGG)n 456 + 6991 7637 0 5 177,63,50,105,106, 0,189,353,416,540, +,+,+,+,+, 681401 Satellite Satellite 585 chrUn_NT_469697v1 7729 7998 (ACCCATTGGG)n 456 + 7729 7998 0 2 146,108, 0,161, +,+, 681403 Satellite Satellite 585 chrUn_NT_469697v1 8347 8750 (CCCCATTGGG)n 321 + 8347 8750 0 2 266,126, 0,277, +,+, 681405 Satellite Satellite 585 chrUn_NT_469698v1 4709 9637 GGERV20_I-int 800 - 4709 9637 0 8 212,540,631,266,1269,798,792,209, 0,212,782,1459,1824,3107,3927,4719, -,-,-,-,-,-,-,-, 681415 LTR ERVL 585 chrUn_NT_469700v1 2795 4397 GGXHOI 391 - 2795 4397 0 3 854,349,331, 0,907,1271, -,-,-, 681428 Satellite W-chromosome 585 chrUn_NT_469700v1 5098 6559 GGXHOI 364 - 5098 6559 0 4 292,185,390,443, 0,328,571,1018, -,-,-,-, 681430 Satellite W-chromosome 585 chrUn_NT_469700v1 7365 7946 GGXHOI 375 - 7365 7946 0 2 233,332, 0,249, -,-, 681432 Satellite W-chromosome 585 chrUn_NT_469703v1 1950 2092 (GTTCTTTCC)n 1000 + 1950 2092 0 2 43,43, 0,99, +,+, 681453 Simple_repeat Simple_repeat 585 chrUn_NT_469703v1 4407 4616 (GTTCTTTGC)n 991 + 4407 4616 0 2 45,107, 0,102, +,+, 681458 Simple_repeat Simple_repeat 585 chrUn_NT_469703v1 6950 7203 (GTTCTTTCC)n 968 + 6950 7203 0 3 53,43,52, 0,111,201, +,+,+, 681461 Simple_repeat Simple_repeat 585 chrUn_NT_469703v1 8941 9176 (GTTCTTTCC)n 984 + 8941 9176 0 3 44,43,43, 0,102,192, +,+,+, 681470 Simple_repeat Simple_repeat 585 chrUn_NT_469704v1 3995 5074 GGXHOI 576 - 3995 5074 0 3 390,310,70, 0,432,1009, -,-,-, 681476 Satellite W-chromosome 585 chrUn_NT_469704v1 8601 9626 GGXHOI 524 - 8601 9626 0 2 378,605, 0,420, -,-, 681481 Satellite W-chromosome 585 chrUn_NT_469705v1 5037 5177 GA-rich 394 + 5037 5177 0 2 28,64, 0,76, +,+, 681491 Low_complexity Low_complexity 585 chrUn_NT_469706v1 1153 6540 GGXHOI 389 - 1153 6540 0 4 281,3351,1135,578, 0,293,3656,4809, -,-,-,-, 681499 Satellite W-chromosome 585 chrUn_NT_469706v1 6652 9353 GGXHOI 399 - 6652 9353 0 2 1412,1234, 0,1467, -,-, 681500 Satellite W-chromosome 585 chrUn_NT_469708v1 2658 3164 GGXHOI 387 - 2658 3164 0 2 147,347, 0,159, -,-, 681508 Satellite W-chromosome 585 chrUn_NT_469708v1 3237 8921 GGXHOI 374 - 3237 8921 0 5 3042,648,997,788,145, 0,3054,3727,4736,5539, -,-,-,-,-, 681509 Satellite W-chromosome 585 chrUn_NT_469711v1 5623 7015 GGLTR7-int 299 - 5623 7015 0 3 287,290,101, 0,975,1291, -,-,-, 681525 LTR ERV1 585 chrUn_NT_469711v1 7748 9614 GGERVL-B-int 670 - 7748 9614 0 3 916,784,82, 0,916,1784, -,-,-, 681527 LTR ERVL 585 chrUn_NT_469712v1 4488 4784 CR1-X2 415 + 4488 4784 0 2 65,231, 0,65, +,+, 681530 LINE CR1 585 chrUn_NT_469713v1 2701 4178 GGXHOI 343 - 2701 4178 0 3 884,190,349, 0,902,1128, -,-,-, 681536 Satellite W-chromosome 585 chrUn_NT_469713v1 4677 5836 GGXHOI 372 - 4677 5836 0 2 769,362, 0,797, -,-, 681538 Satellite W-chromosome 585 chrUn_NT_469713v1 7241 8304 GGXHOI 341 - 7241 8304 0 3 391,340,268, 0,417,795, -,-,-, 681541 Satellite W-chromosome 585 chrUn_NT_469716v1 7086 8011 GGXHOI 380 - 7086 8011 0 2 391,472, 0,453, -,-, 681571 Satellite W-chromosome 585 chrUn_NT_469717v1 705 3034 CR1-F 515 + 705 3034 0 7 198,203,202,197,153,196,210, 0,242,735,979,1439,1878,2119, +,+,+,+,+,+,+, 681576 LINE CR1 585 chrUn_NT_469717v1 3077 4665 CR1-F 505 + 3077 4665 0 6 203,202,203,156,199,180, 0,244,488,957,1158,1408, +,+,+,+,+,+, 681580 LINE CR1 585 chrUn_NT_469717v1 4710 9606 CR1-F 535 + 4710 9606 0 14 190,200,203,204,203,155,201,200,203,203,204,154,199,131, 0,232,732,977,1223,1693,2137,2616,3114,3359,3604,4077,4521,4765, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 681582 LINE CR1 585 chrUn_NT_469718v1 6052 7185 CR1-B2 698 - 6052 7185 0 2 903,227, 0,906, -,-, 681595 LINE CR1 585 chrUn_NT_469720v1 351 757 (CAAGG)n 561 + 351 757 0 2 183,223, 0,183, +,+, 681601 Simple_repeat Simple_repeat 585 chrUn_NT_469720v1 1197 2187 (CCTTG)n 503 + 1197 2187 0 2 376,586, 0,404, +,+, 681606 Simple_repeat Simple_repeat 585 chrUn_NT_469720v1 2755 3496 (CAAGG)n 471 + 2755 3496 0 2 192,507, 0,234, +,+, 681610 Simple_repeat Simple_repeat 585 chrUn_NT_469720v1 3620 4325 (CCTTG)n 524 + 3620 4325 0 3 174,176,319, 0,193,386, +,+,+, 681611 Simple_repeat Simple_repeat 585 chrUn_NT_469720v1 5858 6354 (CAAGG)n 473 + 5858 6354 0 3 69,34,216, 0,246,280, +,+,+, 681616 Simple_repeat Simple_repeat 585 chrUn_NT_469720v1 7425 8044 (CAAGG)n 533 + 7425 8044 0 2 374,221, 0,398, +,+, 681625 Simple_repeat Simple_repeat 585 chrUn_NT_469720v1 8218 8674 (CCTTG)n 496 + 8218 8674 0 2 172,259, 0,197, +,+, 681628 Simple_repeat Simple_repeat 585 chrUn_NT_469721v1 341 8430 Sat-CR1_GG 174 + 341 8430 0 2 23,5105, 0,2984, +,+, 681634 Satellite Satellite 585 chrUn_NT_469721v1 364 3325 GGXHOI 582 + 364 3325 0 2 1901,490, 0,2471, +,+, 681635 Satellite W-chromosome 585 chrUn_NT_469721v1 3366 8571 GGXHOI 582 + 3366 8571 0 4 806,641,2492,375, 0,1128,2090,4830, +,+,+,+, 681636 Satellite W-chromosome 585 chrUn_NT_469721v1 8664 9569 GGXHOI 451 + 8664 9569 0 3 403,344,77, 0,447,828, +,+,+, 681637 Satellite W-chromosome 585 chrUn_NT_469722v1 65 994 (CCTTG)n 523 + 65 994 0 3 476,212,180, 0,515,749, +,+,+, 681639 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 1316 2385 (CCTTG)n 604 + 1316 2385 0 4 311,121,69,384, 0,311,616,685, +,+,+,+, 681643 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 4390 5015 (CCTTG)n 530 + 4390 5015 0 2 201,392, 0,233, +,+, 681657 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 5107 5680 (CCTTG)n 618 + 5107 5680 0 3 104,65,213, 0,295,360, +,+,+, 681659 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 5745 6578 (CCTTG)n 577 + 5745 6578 0 3 184,223,408, 0,202,425, +,+,+, 681662 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 6325 6808 (GCCTG)n 504 + 6325 6808 0 2 271,25, 0,458, +,+, 681663 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 6839 7457 (CCTTG)n 597 + 6839 7457 0 2 191,370, 0,248, +,+, 681665 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 7502 7997 (CCTTG)n 561 + 7502 7997 0 2 303,192, 0,303, +,+, 681667 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 8046 8532 (CCTTG)n 568 + 8046 8532 0 2 151,152, 0,334, +,+, 681669 Simple_repeat Simple_repeat 585 chrUn_NT_469722v1 8587 9133 (CCTTG)n 568 + 8587 9133 0 3 108,10,69, 0,292,477, +,+,+, 681672 Simple_repeat Simple_repeat 585 chrUn_NT_469723v1 2627 3610 GGXHOI 383 - 2627 3610 0 2 681,287, 0,696, -,-, 681678 Satellite W-chromosome 585 chrUn_NT_469723v1 3695 5746 GGXHOI 389 - 3695 5746 0 3 638,1058,329, 0,649,1722, -,-,-, 681679 Satellite W-chromosome 585 chrUn_NT_469723v1 5831 7233 GGXHOI 410 - 5831 7233 0 2 266,1118, 0,284, -,-, 681680 Satellite W-chromosome 585 chrUn_NT_469723v1 7357 9589 GGXHOI 408 - 7357 9589 0 3 481,229,1495, 0,494,737, -,-,-, 681681 Satellite W-chromosome 585 chrUn_NT_469724v1 762 1665 GGXHOI 315 + 762 1665 0 3 321,390,131, 0,341,772, +,+,+, 681683 Satellite W-chromosome 585 chrUn_NT_469724v1 5435 6546 GGXHOI 408 + 5435 6546 0 4 190,357,103,355, 0,210,597,756, +,+,+,+, 681691 Satellite W-chromosome 585 chrUn_NT_469727v1 517 1389 (CCTTG)n 585 + 517 1389 0 2 481,362, 0,510, +,+, 681706 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 1491 1899 (CCTTG)n 582 + 1491 1899 0 2 178,201, 0,207, +,+, 681708 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 1971 2445 (CCTTG)n 588 + 1971 2445 0 2 204,70, 0,404, +,+, 681710 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 2498 3688 (CCTTG)n 638 + 2498 3688 0 3 177,178,759, 0,237,431, +,+,+, 681713 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 3158 4148 (GCCTG)n 468 + 3158 4148 0 3 343,16,269, 0,527,721, +,+,+, 681714 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 3894 4776 (CCTTG)n 583 + 3894 4776 0 3 449,139,38, 0,475,844, +,+,+, 681717 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 4910 5604 (CCTTG)n 592 + 4910 5604 0 2 108,407, 0,287, +,+, 681720 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 5849 6882 (CCTTG)n 624 + 5849 6882 0 3 139,70,474, 0,457,559, +,+,+, 681725 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 6646 7171 (GCCTG)n 550 + 6646 7171 0 2 266,74, 0,451, +,+, 681728 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 7153 8633 (CCTTG)n 640 + 7153 8633 0 4 182,232,108,306, 0,199,563,1174, +,+,+,+, 681730 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 8353 9325 (GCCTG)n 492 + 8353 9325 0 2 330,434, 0,538, +,+, 681733 Simple_repeat Simple_repeat 585 chrUn_NT_469727v1 8923 9589 (CCTTG)n 586 + 8923 9589 0 2 455,30, 0,636, +,+, 681735 Simple_repeat Simple_repeat 585 chrUn_NT_469729v1 3380 4486 CR1-B2 693 - 3380 4486 0 2 878,225, 0,881, -,-, 681747 LINE CR1 585 chrUn_NT_469731v1 70 188 (GCGAG)n 486 + 70 188 0 2 49,21, 0,97, +,+, 681752 Simple_repeat Simple_repeat 585 chrUn_NT_469731v1 189 722 (CGAGG)n 526 + 189 722 0 2 315,173, 0,360, +,+, 681754 Simple_repeat Simple_repeat 585 chrUn_NT_469731v1 1219 1799 (CGAGG)n 480 + 1219 1799 0 2 161,108, 0,472, +,+, 681758 Simple_repeat Simple_repeat 585 chrUn_NT_469731v1 3220 4273 (CGAGG)n 515 + 3220 4273 0 4 195,174,401,178, 0,207,438,875, +,+,+,+, 681766 Simple_repeat Simple_repeat 585 chrUn_NT_469731v1 5584 6178 (CGAGG)n 569 + 5584 6178 0 2 388,175, 0,419, +,+, 681771 Simple_repeat Simple_repeat 585 chrUn_NT_469734v1 6113 6736 CR1-H 685 - 6113 6736 0 2 140,477, 0,146, -,-, 681814 LINE CR1 585 chrUn_NT_469737v1 937 1421 (CAAGG)n 535 + 937 1421 0 3 56,212,213, 0,59,271, +,+,+, 681829 Simple_repeat Simple_repeat 585 chrUn_NT_469737v1 1543 2217 (CAAGG)n 571 + 1543 2217 0 3 215,84,202, 0,388,472, +,+,+, 681831 Simple_repeat Simple_repeat 585 chrUn_NT_469737v1 2302 3125 (CAAGG)n 571 + 2302 3125 0 3 134,61,436, 0,311,387, +,+,+, 681834 Simple_repeat Simple_repeat 585 chrUn_NT_469737v1 6087 6416 (CAGGC)n 498 + 6087 6416 0 2 115,35, 0,294, +,+, 681850 Simple_repeat Simple_repeat 585 chrUn_NT_469737v1 6720 7383 (CAAGG)n 493 + 6720 7383 0 3 195,173,113, 0,195,550, +,+,+, 681854 Simple_repeat Simple_repeat 585 chrUn_NT_469737v1 7442 7852 (CAAGG)n 488 + 7442 7852 0 2 191,194, 0,216, +,+, 681857 Simple_repeat Simple_repeat 585 chrUn_NT_469737v1 8501 9574 (CAAGG)n 547 + 8501 9574 0 4 420,92,133,33, 0,615,707,1040, +,+,+,+, 681861 Simple_repeat Simple_repeat 585 chrUn_NT_469738v1 5020 9597 GGXHOI 475 - 5020 9597 0 6 651,398,480,641,1546,758, 0,667,1081,1577,2256,3819, -,-,-,-,-,-, 681865 Satellite W-chromosome 585 chrUn_NT_469739v1 6775 9585 Z-REP 809 + 6775 9585 0 3 957,422,1227, 0,968,1583, +,+,+, 681870 Satellite macro 585 chrUn_NT_469741v1 436 3241 GGXHOI 366 - 436 3241 0 5 154,857,672,184,860, 0,169,1044,1733,1945, -,-,-,-,-, 681873 Satellite W-chromosome 585 chrUn_NT_469741v1 5657 7590 GGXHOI 329 - 5657 7590 0 2 740,1130, 0,803, -,-, 681881 Satellite W-chromosome 585 chrUn_NT_469741v1 9017 9576 GGXHOI 373 - 9017 9576 0 2 246,296, 0,263, -,-, 681884 Satellite W-chromosome 585 chrUn_NT_469742v1 181 734 (CGAGG)n 534 + 181 734 0 2 356,179, 0,374, +,+, 681886 Simple_repeat Simple_repeat 585 chrUn_NT_469742v1 1721 2679 (CGAGG)n 457 + 1721 2679 0 3 490,61,183, 0,681,775, +,+,+, 681890 Simple_repeat Simple_repeat 585 chrUn_NT_469742v1 3599 4015 (GGCGA)n 316 + 3599 4015 0 2 323,40, 0,376, +,+, 681894 Simple_repeat Simple_repeat 585 chrUn_NT_469742v1 6169 8475 (CGAGG)n 512 + 6169 8475 0 7 179,32,408,344,552,179,476, 0,225,274,702,1063,1627,1830, +,+,+,+,+,+,+, 681902 Simple_repeat Simple_repeat 585 chrUn_NT_469743v1 6097 6530 G-rich 471 + 6097 6530 0 2 30,348, 0,85, +,+, 681913 Low_complexity Low_complexity 585 chrUn_NT_469744v1 3319 3682 GGLTR7B 335 + 3319 3682 0 2 101,238, 0,125, +,+, 681919 LTR ERV1 585 chrUn_NT_469746v1 2419 8312 GGLTR3A 823 - 2419 8312 0 2 5375,518, 0,5375, -,-, 681959 LTR ERVL 585 chrUn_NT_469747v1 6691 7606 GGXHOI 417 - 6691 7606 0 2 609,284, 0,631, -,-, 681962 Satellite W-chromosome 585 chrUn_NT_469750v1 3017 3399 (CGAGG)n 481 + 3017 3399 0 2 173,187, 0,195, +,+, 681982 Simple_repeat Simple_repeat 585 chrUn_NT_469750v1 5336 6494 (CGAGG)n 509 + 5336 6494 0 4 173,348,375,188, 0,195,571,970, +,+,+,+, 681991 Simple_repeat Simple_repeat 585 chrUn_NT_469750v1 7696 9528 (CGAGG)n 441 + 7696 9528 0 2 149,1683, 0,149, +,+, 681998 Simple_repeat Simple_repeat 585 chrUn_NT_469751v1 1498 3915 GGERV10_LTR 848 - 1498 3915 0 2 38,41, 0,2376, -,-, 682001 LTR ERVL 585 chrUn_NT_469751v1 1661 3873 GGLTR10D-int 928 - 1661 3873 0 2 364,1845, 0,367, -,-, 682002 LTR ERVK 585 chrUn_NT_469751v1 4521 5367 (CGAGG)n 571 + 4521 5367 0 2 177,643, 0,203, +,+, 682007 Simple_repeat Simple_repeat 585 chrUn_NT_469751v1 6807 7296 (CGAGG)n 530 + 6807 7296 0 2 303,168, 0,321, +,+, 682013 Simple_repeat Simple_repeat 585 chrUn_NT_469751v1 7734 8099 (CGAGG)n 537 + 7734 8099 0 2 171,176, 0,189, +,+, 682017 Simple_repeat Simple_repeat 585 chrUn_NT_469751v1 8137 9373 (CGAGG)n 452 + 8137 9373 0 2 529,526, 0,710, +,+, 682019 Simple_repeat Simple_repeat 585 chrUn_NT_469752v1 1834 2401 GGXHOI 397 - 1834 2401 0 2 363,188, 0,379, -,-, 682024 Satellite W-chromosome 585 chrUn_NT_469752v1 2577 4607 GGXHOI 355 - 2577 4607 0 7 633,124,141,486,129,153,225, 0,649,810,970,1472,1614,1805, -,-,-,-,-,-,-, 682025 Satellite W-chromosome 585 chrUn_NT_469752v1 4729 5306 GGXHOI 345 - 4729 5306 0 2 143,394, 0,183, -,-, 682026 Satellite W-chromosome 585 chrUn_NT_469752v1 6151 6802 GGXHOI 339 - 6151 6802 0 2 443,150, 0,501, -,-, 682029 Satellite W-chromosome 585 chrUn_NT_469752v1 6874 7800 GGXHOI 370 - 6874 7800 0 2 408,466, 0,460, -,-, 682030 Satellite W-chromosome 585 chrUn_NT_469752v1 8023 8649 GGXHOI 362 - 8023 8649 0 2 462,136, 0,490, -,-, 682031 Satellite W-chromosome 585 chrUn_NT_469752v1 8833 9570 GGXHOI 341 - 8833 9570 0 3 257,311,127, 0,274,610, -,-,-, 682032 Satellite W-chromosome 585 chrUn_NT_469753v1 7719 8226 (GCCCCACAGCT)n 342 - 7719 8226 0 2 145,323, 0,184, -,-, 682040 Satellite Satellite 585 chrUn_NT_469753v1 8645 8941 (ACCCCATAGGG)n 596 - 8645 8941 0 2 120,137, 0,159, -,-, 682042 Satellite Satellite 585 chrUn_NT_469754v1 1091 3367 GGXHOI 410 + 1091 3367 0 3 681,781,744, 0,735,1532, +,+,+, 682048 Satellite W-chromosome 585 chrUn_NT_469754v1 3795 4774 GGXHOI 437 + 3795 4774 0 2 356,607, 0,372, +,+, 682049 Satellite W-chromosome 585 chrUn_NT_469754v1 6292 8145 GGXHOI 461 + 6292 8145 0 2 481,1356, 0,497, +,+, 682051 Satellite W-chromosome 585 chrUn_NT_469754v1 8243 9139 GGXHOI 440 + 8243 9139 0 2 356,524, 0,372, +,+, 682052 Satellite W-chromosome 585 chrUn_NT_469759v1 633 786 (GTTGTTTCC)n 983 + 633 786 0 2 60,42, 0,111, +,+, 682102 Simple_repeat Simple_repeat 585 chrUn_NT_469759v1 2654 2900 (GTTGTTTCC)n 927 + 2654 2900 0 3 42,60,42, 0,93,204, +,+,+, 682108 Simple_repeat Simple_repeat 585 chrUn_NT_469759v1 6358 6512 (GTTCTTTCC)n 934 + 6358 6512 0 2 54,44, 0,110, +,+, 682121 Simple_repeat Simple_repeat 585 chrUn_NT_469759v1 8037 8190 (GTTCTTTCC)n 891 + 8037 8190 0 2 53,43, 0,110, +,+, 682128 Simple_repeat Simple_repeat 585 chrUn_NT_469760v1 1393 5537 GGXHOI 369 - 1393 5537 0 4 1986,132,1117,819, 0,2033,2181,3325, -,-,-,-, 682134 Satellite W-chromosome 585 chrUn_NT_469760v1 6035 7741 GGXHOI 364 - 6035 7741 0 6 181,133,112,466,335,324, 0,244,392,523,1006,1382, -,-,-,-,-,-, 682135 Satellite W-chromosome 585 chrUn_NT_469760v1 8014 9541 GGXHOI 406 - 8014 9541 0 4 126,530,291,531, 0,141,687,996, -,-,-,-, 682136 Satellite W-chromosome 585 chrUn_NT_469761v1 181 838 (CAAGG)n 542 + 181 838 0 2 224,266, 0,391, +,+, 682138 Simple_repeat Simple_repeat 585 chrUn_NT_469761v1 953 1496 (CAAGG)n 548 + 953 1496 0 3 104,17,59, 0,284,484, +,+,+, 682142 Simple_repeat Simple_repeat 585 chrUn_NT_469761v1 2607 2983 (CAAGG)n 541 + 2607 2983 0 2 181,195, 0,181, +,+, 682151 Simple_repeat Simple_repeat 585 chrUn_NT_469761v1 3040 4591 (CAAGG)n 602 + 3040 4591 0 6 130,111,402,51,219,96, 0,306,417,997,1064,1455, +,+,+,+,+,+, 682153 Simple_repeat Simple_repeat 585 chrUn_NT_469762v1 5963 6213 (ACTCC)n 94 + 5963 6213 0 2 22,168, 0,82, +,+, 682187 Simple_repeat Simple_repeat 585 chrUn_NT_469763v1 1086 1281 GGXHOI 439 + 1086 1281 0 2 21,129, 0,66, +,+, 682203 Satellite W-chromosome 585 chrUn_NT_469763v1 1365 3028 GGXHOI 490 + 1365 3028 0 3 481,458,252, 0,700,1411, +,+,+, 682204 Satellite W-chromosome 585 chrUn_NT_469763v1 2940 5947 Sat-CR1_GG 152 + 2940 5947 0 2 127,1477, 0,1530, +,+, 682207 Satellite Satellite 585 chrUn_NT_469763v1 4517 6901 GGXHOI 542 + 4517 6901 0 2 1659,322, 0,2062, +,+, 682209 Satellite W-chromosome 585 chrUn_NT_469763v1 6938 9543 GGXHOI 494 + 6938 9543 0 3 612,275,755, 0,1100,1850, +,+,+, 682212 Satellite W-chromosome 585 chrUn_NT_469765v1 3420 4043 CR1-H 675 - 3420 4043 0 2 139,478, 0,145, -,-, 682223 LINE CR1 585 chrUn_NT_469765v1 6206 7481 CR1-H 590 - 6206 7481 0 2 116,1159, 0,116, -,-, 682227 LINE CR1 585 chrUn_NT_469766v1 8596 9538 GGXHOI 380 - 8596 9538 0 2 542,383, 0,559, -,-, 682230 Satellite W-chromosome 585 chrUn_NT_469767v1 5016 5297 (ACCCCATAGGG)n 477 + 5016 5297 0 2 127,123, 0,158, +,+, 682233 Satellite Satellite 585 chrUn_NT_469768v1 2717 4590 CR1-F 608 - 2717 4590 0 7 181,203,204,203,200,191,178, 0,223,468,714,1217,1459,1695, -,-,-,-,-,-,-, 682240 LINE CR1 585 chrUn_NT_469768v1 4634 5996 CR1-F 612 - 4634 5996 0 6 180,204,198,202,189,177, 0,222,468,707,951,1185, -,-,-,-,-,-, 682242 LINE CR1 585 chrUn_NT_469768v1 6040 8314 CR1-F 532 - 6040 8314 0 6 174,202,156,199,203,176, 0,454,947,1368,1609,2098, -,-,-,-,-,-, 682243 LINE CR1 585 chrUn_NT_469768v1 8355 9476 CR1-F 570 - 8355 9476 0 4 165,189,201,211, 0,434,666,910, -,-,-,-, 682248 LINE CR1 585 chrUn_NT_469769v1 3925 4087 (AACAACGGA)n 1000 + 3925 4087 0 2 51,60, 0,102, +,+, 682270 Simple_repeat Simple_repeat 585 chrUn_NT_469769v1 6759 6918 (AACGGAAAG)n 896 + 6759 6918 0 2 66,39, 0,120, +,+, 682275 Simple_repeat Simple_repeat 585 chrUn_NT_469770v1 5686 8058 GGXHOI 335 - 5686 8058 0 3 369,1232,676, 0,408,1696, -,-,-, 682290 Satellite W-chromosome 585 chrUn_NT_469773v1 4021 4304 CR1-X1 427 - 4021 4304 0 2 220,63, 0,220, -,-, 682310 LINE CR1 585 chrUn_NT_469773v1 6884 7228 CR1-F2 400 + 6884 7228 0 2 42,243, 0,101, +,+, 682312 LINE CR1 585 chrUn_NT_469773v1 7269 9529 Z-REP 833 + 7269 9529 0 2 894,1355, 0,905, +,+, 682314 Satellite macro 585 chrUn_NT_469774v1 1170 2522 GGXHOI 259 - 1170 2522 0 2 136,1167, 0,185, -,-, 682316 Satellite W-chromosome 585 chrUn_NT_469774v1 2618 4931 GGXHOI 388 - 2618 4931 0 2 1906,390, 0,1923, -,-, 682317 Satellite W-chromosome 585 chrUn_NT_469774v1 4997 6044 GGXHOI 416 - 4997 6044 0 2 850,179, 0,868, -,-, 682318 Satellite W-chromosome 585 chrUn_NT_469774v1 6111 6758 GGXHOI 344 - 6111 6758 0 2 122,502, 0,145, -,-, 682319 Satellite W-chromosome 585 chrUn_NT_469774v1 6974 7994 GGXHOI 377 - 6974 7994 0 2 831,173, 0,847, -,-, 682320 Satellite W-chromosome 585 chrUn_NT_469775v1 4206 5114 GGXHOI 393 - 4206 5114 0 2 435,454, 0,454, -,-, 682323 Satellite W-chromosome 585 chrUn_NT_469775v1 5363 5771 GGXHOI 335 - 5363 5771 0 2 183,165, 0,243, -,-, 682324 Satellite W-chromosome 585 chrUn_NT_469775v1 5994 6737 GGXHOI 398 - 5994 6737 0 2 313,410, 0,333, -,-, 682325 Satellite W-chromosome 585 chrUn_NT_469775v1 6822 9377 GGXHOI 392 - 6822 9377 0 2 2126,407, 0,2148, -,-, 682326 Satellite W-chromosome 585 chrUn_NT_469778v1 4869 6350 GGXHOI 528 - 4869 6350 0 2 714,706, 0,775, -,-, 682335 Satellite W-chromosome 585 chrUn_NT_469779v1 562 1889 GGXHOI 342 + 562 1889 0 2 1031,248, 0,1079, +,+, 682340 Satellite W-chromosome 585 chrUn_NT_469779v1 1992 2633 GGXHOI 376 + 1992 2633 0 2 254,325, 0,316, +,+, 682341 Satellite W-chromosome 585 chrUn_NT_469779v1 2802 9526 GGXHOI 398 + 2802 9526 0 5 337,215,640,3551,1865, 0,384,610,1292,4859, +,+,+,+,+, 682342 Satellite W-chromosome 585 chrUn_NT_469780v1 1448 2938 CR1-C2 591 + 1448 2938 0 3 293,473,266, 0,751,1224, +,+,+, 682344 LINE CR1 585 chrUn_NT_469780v1 3868 4443 CR1-C 557 + 3868 4443 0 2 179,396, 0,179, +,+, 682349 LINE CR1 585 chrUn_NT_469780v1 4447 4988 CR1-F 768 - 4447 4988 0 2 485,56, 0,485, -,-, 682350 LINE CR1 585 chrUn_NT_469780v1 5037 6381 CR1-B 851 + 5037 6381 0 2 701,639, 0,705, +,+, 682351 LINE CR1 585 chrUn_NT_469781v1 296 931 (CCTTG)n 626 + 296 931 0 2 378,39, 0,596, +,+, 682356 Simple_repeat Simple_repeat 585 chrUn_NT_469781v1 2367 3674 (CCTTG)n 627 + 2367 3674 0 4 182,514,108,323, 0,213,859,984, +,+,+,+, 682367 Simple_repeat Simple_repeat 585 chrUn_NT_469781v1 5810 6372 (CCTTG)n 623 + 5810 6372 0 2 173,376, 0,186, +,+, 682380 Simple_repeat Simple_repeat 585 chrUn_NT_469781v1 6419 7573 (CCTTG)n 592 + 6419 7573 0 4 210,411,278,172, 0,219,682,982, +,+,+,+, 682382 Simple_repeat Simple_repeat 585 chrUn_NT_469781v1 7612 8336 (CCTTG)n 541 + 7612 8336 0 3 188,215,136, 0,188,588, +,+,+, 682384 Simple_repeat Simple_repeat 585 chrUn_NT_469781v1 8396 9520 (CCTTG)n 622 + 8396 9520 0 4 360,182,187,336, 0,386,568,788, +,+,+,+, 682387 Simple_repeat Simple_repeat 585 chrUn_NT_469782v1 8622 9099 CR1-D2 586 + 8622 9099 0 2 307,170, 0,307, +,+, 682392 LINE CR1 585 chrUn_NT_469782v1 9072 9520 CR1-D 677 + 9072 9520 0 2 110,338, 0,110, +,+, 682393 LINE CR1 585 chrUn_NT_469783v1 747 2620 CR1-F 608 + 747 2620 0 7 177,191,200,203,204,204,181, 0,222,455,955,1200,1446,1692, +,+,+,+,+,+,+, 682395 LINE CR1 585 chrUn_NT_469783v1 2664 5694 CR1-F 578 + 2664 5694 0 10 178,190,200,203,204,204,155,202,204,180, 0,223,455,955,1200,1446,1916,2361,2604,2850, +,+,+,+,+,+,+,+,+,+, 682397 LINE CR1 585 chrUn_NT_469783v1 5738 8767 CR1-F 568 + 5738 8767 0 10 175,191,200,203,204,204,154,202,207,179, 0,220,453,952,1197,1443,1914,2358,2601,2850, +,+,+,+,+,+,+,+,+,+, 682401 LINE CR1 585 chrUn_NT_469783v1 8811 9468 CR1-F 655 + 8811 9468 0 3 178,191,199, 0,224,458, +,+,+, 682405 LINE CR1 585 chrUn_NT_469784v1 2522 2768 CR1-X 514 - 2522 2768 0 2 75,171, 0,75, -,-, 682409 LINE CR1 585 chrUn_NT_469784v1 8627 9518 CR1-B2 694 + 8627 9518 0 2 226,662, 0,229, +,+, 682413 LINE CR1 585 chrUn_NT_469786v1 668 1093 (CGAGG)n 480 + 668 1093 0 2 19,348, 0,77, +,+, 682430 Simple_repeat Simple_repeat 585 chrUn_NT_469786v1 1129 1665 (CGAGG)n 548 + 1129 1665 0 2 285,100, 0,436, +,+, 682432 Simple_repeat Simple_repeat 585 chrUn_NT_469786v1 1796 2586 (CGAGG)n 546 + 1796 2586 0 2 361,238, 0,552, +,+, 682435 Simple_repeat Simple_repeat 585 chrUn_NT_469786v1 2897 4721 (CGAGG)n 560 + 2897 4721 0 6 187,634,8,207,39,196, 0,187,1009,1202,1589,1628, +,+,+,+,+,+, 682440 Simple_repeat Simple_repeat 585 chrUn_NT_469786v1 5443 6056 (CCTCG)n 572 + 5443 6056 0 3 181,225,177, 0,181,436, +,+,+, 682448 Simple_repeat Simple_repeat 585 chrUn_NT_469787v1 4849 6249 GGLTR7-int 297 - 4849 6249 0 3 290,293,101, 0,980,1299, -,-,-, 682464 LTR ERV1 585 chrUn_NT_469787v1 6983 9516 GGERVL-B-int 800 - 6983 9516 0 3 916,1202,56, 0,916,2477, -,-,-, 682466 LTR ERVL 585 chrUn_NT_469788v1 4362 4965 GGXHOI 327 + 4362 4965 0 2 132,457, 0,146, +,+, 682474 Satellite W-chromosome 585 chrUn_NT_469788v1 5719 7263 GGXHOI 387 + 5719 7263 0 2 472,1009, 0,535, +,+, 682476 Satellite W-chromosome 585 chrUn_NT_469789v1 1584 5080 GGXHOI 407 - 1584 5080 0 6 645,898,280,1033,97,408, 0,658,1590,1911,2959,3088, -,-,-,-,-,-, 682481 Satellite W-chromosome 585 chrUn_NT_469789v1 5308 9520 GGXHOI 373 - 5308 9520 0 11 206,362,494,554,867,233,359,349,132,194,178, 0,223,631,1142,1732,2613,2894,3270,3640,3785,4034, -,-,-,-,-,-,-,-,-,-,-, 682482 Satellite W-chromosome 585 chrUn_NT_469792v1 8711 8956 (GCCCCACAGCT)n 366 - 8711 8956 0 2 79,52, 0,193, -,-, 682533 Satellite Satellite 585 chrUn_NT_469792v1 9167 9469 (GCCCCACAGCT)n 440 + 9167 9469 0 2 152,131, 0,171, +,+, 682537 Satellite Satellite 585 chrUn_NT_469793v1 3817 4407 GGXHOI 403 + 3817 4407 0 2 89,459, 0,131, +,+, 682541 Satellite W-chromosome 585 chrUn_NT_469793v1 4927 5993 GGXHOI 408 + 4927 5993 0 3 326,337,343, 0,339,723, +,+,+, 682542 Satellite W-chromosome 585 chrUn_NT_469793v1 6091 6825 GGXHOI 450 + 6091 6825 0 2 179,542, 0,192, +,+, 682543 Satellite W-chromosome 585 chrUn_NT_469793v1 6967 9218 GGXHOI 443 + 6967 9218 0 3 628,189,1393, 0,650,858, +,+,+, 682545 Satellite W-chromosome 585 chrUn_NT_469796v1 210 905 (CGAGG)n 474 + 210 905 0 2 481,184, 0,511, +,+, 682566 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 1044 1426 (CGAGG)n 533 + 1044 1426 0 2 180,178, 0,204, +,+, 682568 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 1911 2908 (CGAGG)n 485 + 1911 2908 0 3 490,276,176, 0,501,821, +,+,+, 682570 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 3018 3744 (CGAGG)n 472 + 3018 3744 0 2 198,349, 0,377, +,+, 682572 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 4533 5112 (CGAGG)n 474 + 4533 5112 0 2 207,30, 0,549, +,+, 682579 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 6816 7501 (CGAGG)n 473 + 6816 7501 0 3 180,268,174, 0,216,511, +,+,+, 682586 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 7554 8140 (CGAGG)n 466 + 7554 8140 0 2 178,359, 0,227, +,+, 682588 Simple_repeat Simple_repeat 585 chrUn_NT_469796v1 8446 9456 (CGAGG)n 531 + 8446 9456 0 3 180,354,420, 0,217,590, +,+,+, 682590 Simple_repeat Simple_repeat 585 chrUn_NT_469797v1 2899 3387 (CGAGG)n 533 + 2899 3387 0 2 299,176, 0,312, +,+, 682598 Simple_repeat Simple_repeat 585 chrUn_NT_469797v1 5347 6074 (CGAGG)n 498 + 5347 6074 0 2 284,271, 0,456, +,+, 682603 Simple_repeat Simple_repeat 585 chrUn_NT_469797v1 7549 8222 (CGAGG)n 505 + 7549 8222 0 3 207,79,180, 0,391,493, +,+,+, 682611 Simple_repeat Simple_repeat 585 chrUn_NT_469798v1 1234 1610 GGXHOI 287 + 1234 1610 0 2 165,154, 0,222, +,+, 682619 Satellite W-chromosome 585 chrUn_NT_469798v1 2140 4459 GGXHOI 336 + 2140 4459 0 5 188,1050,559,130,287, 0,215,1305,1883,2032, +,+,+,+,+, 682621 Satellite W-chromosome 585 chrUn_NT_469798v1 4868 5563 GGXHOI 335 + 4868 5563 0 3 353,180,108, 0,394,587, +,+,+, 682622 Satellite W-chromosome 585 chrUn_NT_469798v1 6235 6847 GGXHOI 302 + 6235 6847 0 2 168,422, 0,190, +,+, 682625 Satellite W-chromosome 585 chrUn_NT_469800v1 1582 8857 GGXHOI 554 - 1582 8857 0 7 1567,288,371,328,268,326,78, 0,2463,4185,4930,5696,6460,7197, -,-,-,-,-,-,-, 682639 Satellite W-chromosome 585 chrUn_NT_469802v1 3052 4123 (CTCTATGGGG)n 588 - 3052 4123 0 5 252,119,236,122,236, 0,266,399,692,835, -,-,-,-,-, 682671 Satellite Satellite 585 chrUn_NT_469802v1 4438 4729 (CTCTATGGGG)n 627 - 4438 4729 0 2 118,117, 0,174, -,-, 682673 Satellite Satellite 585 chrUn_NT_469803v1 2569 4505 GGXHOI 379 - 2569 4505 0 3 516,1002,337, 0,534,1599, -,-,-, 682682 Satellite W-chromosome 585 chrUn_NT_469803v1 6255 7506 GGXHOI 365 - 6255 7506 0 2 1059,179, 0,1072, -,-, 682685 Satellite W-chromosome 585 chrUn_NT_469804v1 6417 8651 GGLTR7-int 572 + 6417 8651 0 3 257,481,795, 0,950,1439, +,+,+, 682694 LTR ERV1 585 chrUn_NT_469804v1 8755 9497 GGLTR10D-int 884 - 8755 9497 0 2 346,393, 0,349, -,-, 682697 LTR ERVK 585 chrUn_NT_469805v1 1501 1764 (CTCTATGGGG)n 630 + 1501 1764 0 2 96,51, 0,212, +,+, 682702 Satellite Satellite 585 chrUn_NT_469805v1 2152 2977 (ACCCATAGAG)n 623 + 2152 2977 0 3 417,247,116, 0,429,709, +,+,+, 682705 Satellite Satellite 585 chrUn_NT_469805v1 3112 3774 (ACCCATAGAG)n 631 + 3112 3774 0 3 91,120,402, 0,117,260, +,+,+, 682707 Satellite Satellite 585 chrUn_NT_469805v1 3976 4609 (ACCCATAGAG)n 611 + 3976 4609 0 4 116,136,221,123, 0,116,276,510, +,+,+,+, 682709 Satellite Satellite 585 chrUn_NT_469805v1 6029 6525 (ACCCATAGAG)n 650 - 6029 6525 0 2 124,276, 0,220, -,-, 682718 Satellite Satellite 585 chrUn_NT_469805v1 6672 7438 (ACCCATAGAG)n 651 + 6672 7438 0 3 239,117,350, 0,276,416, +,+,+, 682721 Satellite Satellite 585 chrUn_NT_469806v1 1684 6314 ENS1-LTR 965 - 1684 6314 0 3 918,2798,909, 0,921,3721, -,-,-, 682726 LTR ERVL 585 chrUn_NT_469806v1 7455 9495 Z-REP 755 + 7455 9495 0 2 154,1139, 0,901, +,+, 682728 Satellite macro 585 chrUn_NT_469809v1 5605 5913 (CCCCATTGGG)n 365 - 5605 5913 0 2 158,133, 0,175, -,-, 682750 Satellite Satellite 585 chrUn_NT_469809v1 6671 6937 (CCCCATTGGG)n 413 - 6671 6937 0 2 125,117, 0,149, -,-, 682752 Satellite Satellite 585 chrUn_NT_469810v1 8793 9489 GGLTR7-int 267 - 8793 9489 0 2 276,373, 0,323, -,-, 682758 LTR ERV1 585 chrUn_NT_469812v1 289 6092 GGXHOI 371 + 289 6092 0 5 1634,3086,422,151,442, 0,1657,4760,5194,5361, +,+,+,+,+, 682769 Satellite W-chromosome 585 chrUn_NT_469812v1 7503 9488 GGXHOI 351 + 7503 9488 0 3 829,334,752, 0,847,1233, +,+,+, 682771 Satellite W-chromosome 585 chrUn_NT_469813v1 2657 3625 GGXHOI 375 - 2657 3625 0 3 353,147,430, 0,370,538, -,-,-, 682774 Satellite W-chromosome 585 chrUn_NT_469813v1 5361 6177 GGXHOI 383 - 5361 6177 0 2 333,438, 0,378, -,-, 682776 Satellite W-chromosome 585 chrUn_NT_469813v1 6957 9465 GGXHOI 357 - 6957 9465 0 3 1543,379,507, 0,1602,2001, -,-,-, 682778 Satellite W-chromosome 585 chrUn_NT_469815v1 2372 4577 GGXHOI 378 - 2372 4577 0 3 944,564,589, 0,991,1616, -,-,-, 682794 Satellite W-chromosome 585 chrUn_NT_469815v1 5090 8403 GGXHOI 396 - 5090 8403 0 5 424,923,615,263,1003, 0,441,1403,2032,2310, -,-,-,-,-, 682796 Satellite W-chromosome 585 chrUn_NT_469815v1 8501 9459 GGXHOI 374 - 8501 9459 0 2 366,576, 0,382, -,-, 682797 Satellite W-chromosome 585 chrUn_NT_469816v1 857 1579 (TTCTG)n 488 + 857 1579 0 2 381,311, 0,411, +,+, 682801 Simple_repeat Simple_repeat 585 chrUn_NT_469820v1 4604 9479 GGXHOI 405 - 4604 9479 0 11 83,263,346,317,820,119,461,139,1480,336,210, 0,101,380,742,1099,1935,2099,2580,2741,4269,4665, -,-,-,-,-,-,-,-,-,-,-, 682824 Satellite W-chromosome 585 chrUn_NT_469823v1 1812 2435 (CAAGG)n 517 + 1812 2435 0 2 373,226, 0,397, +,+, 682849 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 2503 3338 (CCTTG)n 544 + 2503 3338 0 4 51,144,178,45, 0,104,442,790, +,+,+,+, 682850 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 3604 4054 (CCTTG)n 479 + 3604 4054 0 2 242,208, 0,242, +,+, 682855 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 4497 5384 (CAAGG)n 484 + 4497 5384 0 4 182,13,114,225, 0,328,522,662, +,+,+,+, 682861 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 5457 6321 (CCTTG)n 463 + 5457 6321 0 3 95,530,46, 0,108,818, +,+,+, 682864 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 7518 8115 (CAAGG)n 520 + 7518 8115 0 2 126,291, 0,306, +,+, 682874 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 8152 8452 (CAAGG)n 546 + 8152 8452 0 2 97,25, 0,275, +,+, 682877 Simple_repeat Simple_repeat 585 chrUn_NT_469823v1 8900 9137 (CCTTG)n 657 + 8900 9137 0 2 190,31, 0,206, +,+, 682881 Simple_repeat Simple_repeat 585 chrUn_NT_469824v1 8841 9472 GGXHOI 340 + 8841 9472 0 2 141,479, 0,152, +,+, 682895 Satellite W-chromosome 585 chrUn_NT_469825v1 1851 2093 (CTCTATGGGG)n 590 + 1851 2093 0 2 102,19, 0,223, +,+, 682903 Satellite Satellite 585 chrUn_NT_469825v1 4283 4737 (CTCTATGGGG)n 587 + 4283 4737 0 2 276,121, 0,333, +,+, 682906 Satellite Satellite 585 chrUn_NT_469825v1 4808 5491 (CTCTATGGGG)n 611 + 4808 5491 0 2 364,286, 0,397, +,+, 682907 Satellite Satellite 585 chrUn_NT_469825v1 6180 6432 (ACCCCATAGGG)n 486 - 6180 6432 0 2 53,74, 0,178, -,-, 682912 Satellite Satellite 585 chrUn_NT_469825v1 6507 6777 (ACCCATAGGG)n 567 - 6507 6777 0 2 120,150, 0,120, -,-, 682915 Satellite Satellite 585 chrUn_NT_469825v1 7930 8161 (CTCTATGGGG)n 550 + 7930 8161 0 2 61,39, 0,192, +,+, 682924 Satellite Satellite 585 chrUn_NT_469826v1 4052 4621 A-rich 543 + 4052 4621 0 2 489,39, 0,530, +,+, 682928 Low_complexity Low_complexity 585 chrUn_NT_469827v1 5840 6582 GGXHOI 371 + 5840 6582 0 2 595,130, 0,612, +,+, 682942 Satellite W-chromosome 585 chrUn_NT_469827v1 6665 7890 GGXHOI 347 + 6665 7890 0 2 998,205, 0,1020, +,+, 682943 Satellite W-chromosome 585 chrUn_NT_469828v1 1141 1555 (CCTTG)n 598 + 1141 1555 0 2 173,33, 0,381, +,+, 682950 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 1676 2034 (GCCTG)n 520 + 1676 2034 0 2 123,61, 0,297, +,+, 682952 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 2222 3618 (CCTTG)n 609 + 2222 3618 0 6 371,212,192,241,189,191, 0,371,583,775,1016,1205, +,+,+,+,+,+, 682956 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 4016 5333 (CCTTG)n 573 + 4016 5333 0 6 177,231,202,198,186,240, 0,196,437,639,877,1077, +,+,+,+,+,+, 682960 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 5382 6154 (CCTTG)n 567 + 5382 6154 0 3 150,45,355, 0,356,417, +,+,+, 682962 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 6181 7100 (CCTTG)n 588 + 6181 7100 0 3 360,111,158, 0,360,761, +,+,+, 682965 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 7539 8104 (CCTTG)n 564 + 7539 8104 0 2 188,40, 0,525, +,+, 682971 Simple_repeat Simple_repeat 585 chrUn_NT_469828v1 9021 9462 (CCTTG)n 572 + 9021 9462 0 2 180,261, 0,180, +,+, 682979 Simple_repeat Simple_repeat 585 chrUn_NT_469829v1 6922 9347 GGLTR3F1 656 - 6922 9347 0 2 1940,483, 0,1942, -,-, 682985 LTR ERVL 585 chrUn_NT_469831v1 1700 2353 GGXHOI 448 - 1700 2353 0 2 470,138, 0,515, -,-, 682992 Satellite W-chromosome 585 chrUn_NT_469831v1 2446 6214 GGXHOI 435 - 2446 6214 0 4 1299,1379,158,849, 0,1316,2706,2919, -,-,-,-, 682993 Satellite W-chromosome 585 chrUn_NT_469831v1 6324 9461 GGXHOI 444 - 6324 9461 0 6 1303,142,612,156,260,494, 0,1328,1527,2150,2367,2643, -,-,-,-,-,-, 682994 Satellite W-chromosome 585 chrUn_NT_469833v1 714 3387 GGXHOI 377 + 714 3387 0 6 336,222,644,160,138,1072, 0,349,591,1256,1447,1601, +,+,+,+,+,+, 683005 Satellite W-chromosome 585 chrUn_NT_469833v1 3713 4951 GGXHOI 377 + 3713 4951 0 2 132,1077, 0,161, +,+, 683006 Satellite W-chromosome 585 chrUn_NT_469833v1 5065 6636 GGXHOI 413 + 5065 6636 0 2 220,1291, 0,280, +,+, 683007 Satellite W-chromosome 585 chrUn_NT_469833v1 6750 9428 GGXHOI 389 + 6750 9428 0 3 679,1685,266, 0,713,2412, +,+,+, 683008 Satellite W-chromosome 585 chrUn_NT_469837v1 2490 8041 GGXHOI 543 - 2490 8041 0 11 17,191,197,220,308,184,247,194,299,191,192, 0,342,941,1433,1960,2580,3135,3704,4210,4804,5359, -,-,-,-,-,-,-,-,-,-,-, 683041 Satellite W-chromosome 585 chrUn_NT_469837v1 8320 9431 GGXHOI 506 - 8320 9431 0 3 307,72,291, 0,688,820, -,-,-, 683053 Satellite W-chromosome 585 chrUn_NT_469838v1 2202 3038 Sat-CR1_GG 188 + 2202 3038 0 2 103,473, 0,363, +,+, 683060 Satellite Satellite 585 chrUn_NT_469839v1 710 1791 CR1-B2 650 - 710 1791 0 2 854,224, 0,857, -,-, 683084 LINE CR1 585 chrUn_NT_469839v1 6839 7980 CR1-X 461 - 6839 7980 0 3 51,74,111, 0,62,1030, -,-,-, 683088 LINE CR1 585 chrUn_NT_469840v1 3176 4342 GGXHOI 379 + 3176 4342 0 2 587,516, 0,650, +,+, 683096 Satellite W-chromosome 585 chrUn_NT_469840v1 6163 6843 GGXHOI 353 + 6163 6843 0 2 323,335, 0,345, +,+, 683100 Satellite W-chromosome 585 chrUn_NT_469841v1 3809 4365 GGXHOI 249 + 3809 4365 0 2 216,295, 0,261, +,+, 683109 Satellite W-chromosome 585 chrUn_NT_469841v1 4500 7920 GGXHOI 355 + 4500 7920 0 2 1644,1753, 0,1667, +,+, 683110 Satellite W-chromosome 585 chrUn_NT_469843v1 709 1872 GGXHOI 383 - 709 1872 0 2 728,413, 0,750, -,-, 683117 Satellite W-chromosome 585 chrUn_NT_469843v1 3833 5647 GGXHOI 397 - 3833 5647 0 2 604,1167, 0,647, -,-, 683122 Satellite W-chromosome 585 chrUn_NT_469843v1 5679 7538 GGXHOI 394 - 5679 7538 0 2 1431,408, 0,1451, -,-, 683124 Satellite W-chromosome 585 chrUn_NT_469843v1 8283 9440 GGXHOI 394 - 8283 9440 0 3 479,153,486, 0,505,671, -,-,-, 683127 Satellite W-chromosome 585 chrUn_NT_469848v1 3387 3639 (GT)n 562 + 3387 3639 0 3 63,70,33, 0,106,219, +,+,+, 683144 Simple_repeat Simple_repeat 585 chrUn_NT_469848v1 4180 4378 (GT)n 680 + 4180 4378 0 3 55,41,43, 0,98,155, +,+,+, 683148 Simple_repeat Simple_repeat 585 chrUn_NT_469849v1 4792 8541 GGXHOI 387 - 4792 8541 0 3 185,2676,857, 0,205,2892, -,-,-, 683161 Satellite W-chromosome 585 chrUn_NT_469850v1 3137 3981 GGXHOI 317 - 3137 3981 0 3 169,506,139, 0,182,705, -,-,-, 683164 Satellite W-chromosome 585 chrUn_NT_469850v1 4049 5570 GGXHOI 317 - 4049 5570 0 5 292,262,161,414,262, 0,303,624,831,1259, -,-,-,-,-, 683165 Satellite W-chromosome 585 chrUn_NT_469850v1 5692 6256 GGXHOI 473 - 5692 6256 0 3 134,59,344, 0,145,220, -,-,-, 683166 Satellite W-chromosome 585 chrUn_NT_469850v1 6348 9420 GGXHOI 350 - 6348 9420 0 5 283,605,133,1289,639, 0,321,963,1108,2433, -,-,-,-,-, 683167 Satellite W-chromosome 585 chrUn_NT_469853v1 8574 9422 (CCCTAA)n 531 + 8574 9422 0 3 167,201,374, 0,222,474, +,+,+, 683174 Simple_repeat Simple_repeat 585 chrUn_NT_469854v1 1648 1873 (CTCTATGGGG)n 597 + 1648 1873 0 2 114,83, 0,142, +,+, 683184 Satellite Satellite 585 chrUn_NT_469854v1 2801 3072 (CTCTATGGGG)n 471 + 2801 3072 0 2 103,128, 0,143, +,+, 683188 Satellite Satellite 585 chrUn_NT_469854v1 3514 3963 (CTCTATGGGG)n 514 + 3514 3963 0 3 107,158,115, 0,138,334, +,+,+, 683190 Satellite Satellite 585 chrUn_NT_469854v1 4307 4630 (CTCTATGGGG)n 613 + 4307 4630 0 2 96,215, 0,108, +,+, 683193 Satellite Satellite 585 chrUn_NT_469854v1 4795 5066 (CTCTATGGGG)n 502 + 4795 5066 0 2 112,126, 0,145, +,+, 683195 Satellite Satellite 585 chrUn_NT_469854v1 6770 7028 (CTCTATGGGG)n 534 + 6770 7028 0 2 113,121, 0,137, +,+, 683205 Satellite Satellite 585 chrUn_NT_469854v1 7473 7839 (CTCTATGGGG)n 521 + 7473 7839 0 3 108,120,91, 0,131,275, +,+,+, 683207 Satellite Satellite 585 chrUn_NT_469855v1 2579 8876 GGXHOI 357 + 2579 8876 0 3 3115,134,3010, 0,3137,3287, +,+,+, 683219 Satellite W-chromosome 585 chrUn_NT_469855v1 9073 9395 GGXHOI 383 + 9073 9395 0 2 126,176, 0,146, +,+, 683220 Satellite W-chromosome 585 chrUn_NT_469856v1 416 2838 GGXHOI 424 - 416 2838 0 4 132,162,216,1828, 0,170,366,594, -,-,-,-, 683222 Satellite W-chromosome 585 chrUn_NT_469856v1 3521 4108 GGXHOI 442 - 3521 4108 0 2 386,171, 0,416, -,-, 683224 Satellite W-chromosome 585 chrUn_NT_469856v1 4176 5845 GGXHOI 421 - 4176 5845 0 3 1118,309,173, 0,1170,1496, -,-,-, 683225 Satellite W-chromosome 585 chrUn_NT_469856v1 5990 6939 GGXHOI 371 - 5990 6939 0 2 537,380, 0,569, -,-, 683226 Satellite W-chromosome 585 chrUn_NT_469856v1 7052 9426 GGXHOI 355 - 7052 9426 0 3 371,817,1138, 0,397,1236, -,-,-, 683227 Satellite W-chromosome 585 chrUn_NT_469857v1 1806 1952 (TTAGGG)n 963 + 1806 1952 0 2 55,55, 0,91, +,+, 683239 Simple_repeat Simple_repeat 585 chrUn_NT_469857v1 3748 4067 (GGTTAG)n 951 + 3748 4067 0 4 57,27,53,53, 0,111,178,266, +,+,+,+, 683253 Simple_repeat Simple_repeat 585 chrUn_NT_469857v1 4873 4971 (GGGTTA)n 862 + 4873 4971 0 2 34,48, 0,50, +,+, 683259 Simple_repeat Simple_repeat 585 chrUn_NT_469857v1 8016 8222 GA-rich 274 + 8016 8222 0 2 102,73, 0,133, +,+, 683266 Low_complexity Low_complexity 585 chrUn_NT_469857v1 8435 8811 (ACCCATAGAG)n 594 + 8435 8811 0 2 192,69, 0,307, +,+, 683268 Satellite Satellite 585 chrUn_NT_469857v1 8767 9284 (ACCCATAGGG)n 698 - 8767 9284 0 2 231,177, 0,340, -,-, 683270 Satellite Satellite 585 chrUn_NT_469859v1 2005 5713 GGXHOI 400 - 2005 5713 0 11 303,577,346,264,111,134,334,137,160,208,891, 0,324,920,1285,1566,1692,1882,2262,2413,2588,2817, -,-,-,-,-,-,-,-,-,-,-, 683275 Satellite W-chromosome 585 chrUn_NT_469860v1 6446 6519 CR1-H 909 + 6446 6519 0 2 33,33, 0,40, +,+, 683289 LINE CR1 585 chrUn_NT_469862v1 8897 9269 CR1-H2 600 - 8897 9269 0 2 50,246, 0,126, -,-, 683297 LINE CR1 585 chrUn_NT_469864v1 1988 7470 GGXHOI 530 - 1988 7470 0 5 402,268,151,131,181, 0,725,2932,4504,5301, -,-,-,-,-, 683313 Satellite W-chromosome 585 chrUn_NT_469864v1 7613 9417 GGXHOI 584 - 7613 9417 0 3 282,66,125, 0,927,1679, -,-,-, 683317 Satellite W-chromosome 585 chrUn_NT_469866v1 3568 6144 GGXHOI 394 - 3568 6144 0 6 387,261,226,214,765,590, 0,448,727,972,1202,1986, -,-,-,-,-,-, 683327 Satellite W-chromosome 585 chrUn_NT_469866v1 6412 7293 GGXHOI 349 - 6412 7293 0 2 574,267, 0,614, -,-, 683328 Satellite W-chromosome 585 chrUn_NT_469866v1 8036 9341 GGXHOI 429 - 8036 9341 0 2 635,627, 0,678, -,-, 683330 Satellite W-chromosome 585 chrUn_NT_469868v1 1025 5891 Sat-CR1_GG 170 - 1025 5891 0 2 440,3839, 0,1027, -,-, 683334 Satellite Satellite 585 chrUn_NT_469868v1 2106 6242 GGXHOI 558 - 2106 6242 0 2 2696,1124, 0,3012, -,-, 683336 Satellite W-chromosome 585 chrUn_NT_469868v1 6941 8777 Sat-CR1_GG 168 - 6941 8777 0 2 447,684, 0,1152, -,-, 683339 Satellite Satellite 585 chrUn_NT_469869v1 1422 7782 GGXHOI 383 - 1422 7782 0 9 396,1350,272,514,272,2005,419,502,461, 0,451,1815,2102,2634,2929,4946,5380,5899, -,-,-,-,-,-,-,-,-, 683345 Satellite W-chromosome 585 chrUn_NT_469869v1 7848 9145 GGXHOI 364 - 7848 9145 0 3 680,226,322, 0,695,975, -,-,-, 683346 Satellite W-chromosome 585 chrUn_NT_469871v1 1738 3812 (CGAGG)n 540 + 1738 3812 0 4 179,957,67,346, 0,196,1333,1728, +,+,+,+, 683354 Simple_repeat Simple_repeat 585 chrUn_NT_469871v1 4267 4648 (CGAGG)n 537 + 4267 4648 0 2 182,177, 0,204, +,+, 683361 Simple_repeat Simple_repeat 585 chrUn_NT_469871v1 4788 5506 (CGAGG)n 546 + 4788 5506 0 2 360,333, 0,385, +,+, 683362 Simple_repeat Simple_repeat 585 chrUn_NT_469871v1 6187 7222 (CGAGG)n 562 + 6187 7222 0 4 188,262,176,292, 0,237,532,743, +,+,+,+, 683366 Simple_repeat Simple_repeat 585 chrUn_NT_469871v1 8915 9389 (CGAGG)n 532 + 8915 9389 0 2 265,180, 0,294, +,+, 683376 Simple_repeat Simple_repeat 585 chrUn_NT_469872v1 8236 8819 Sat-CR1_GG 166 - 8236 8819 0 2 159,165, 0,418, -,-, 683401 Satellite Satellite 585 chrUn_NT_469873v1 5621 9407 Z-REP 815 + 5621 9407 0 2 543,3232, 0,554, +,+, 683409 Satellite macro 585 chrUn_NT_469874v1 99 486 (CCTCG)n 551 + 99 486 0 2 178,177, 0,210, +,+, 683411 Simple_repeat Simple_repeat 585 chrUn_NT_469874v1 868 1132 (CCCCG)n 350 + 868 1132 0 2 53,158, 0,106, +,+, 683414 Simple_repeat Simple_repeat 585 chrUn_NT_469874v1 1136 1761 (CCTCG)n 572 + 1136 1761 0 3 178,195,61, 0,191,564, +,+,+, 683416 Simple_repeat Simple_repeat 585 chrUn_NT_469874v1 2050 4452 GGERV10_LTR 797 + 2050 4452 0 2 40,38, 0,2364, +,+, 683420 LTR ERVL 585 chrUn_NT_469874v1 2091 4284 GGLTR10D-int 912 + 2091 4284 0 2 1827,363, 0,1830, +,+, 683421 LTR ERVK 585 chrUn_NT_469874v1 4464 6891 GGLTR7-int 602 - 4464 6891 0 2 791,335, 0,2092, -,-, 683422 LTR ERV1 585 chrUn_NT_469876v1 723 2279 (CAAGG)n 622 + 723 2279 0 3 433,225,19, 0,613,1537, +,+,+, 683436 Simple_repeat Simple_repeat 585 chrUn_NT_469876v1 2329 5769 (CAAGG)n 591 + 2329 5769 0 11 227,116,491,177,292,176,260,335,183,214,255, 0,571,729,1236,1429,1767,1949,2388,2765,2948,3185, +,+,+,+,+,+,+,+,+,+,+, 683442 Simple_repeat Simple_repeat 585 chrUn_NT_469876v1 7346 7907 (CAAGG)n 584 + 7346 7907 0 3 174,165,182, 0,189,379, +,+,+, 683454 Simple_repeat Simple_repeat 585 chrUn_NT_469876v1 8185 9347 (CAAGG)n 604 + 8185 9347 0 5 353,149,34,21,218, 0,353,682,900,944, +,+,+,+,+, 683457 Simple_repeat Simple_repeat 585 chrUn_NT_469879v1 584 1005 CR1-Y3 542 + 584 1005 0 2 135,69, 0,352, +,+, 683467 LINE CR1 585 chrUn_NT_469879v1 752 904 CR1-Y2 620 + 752 904 0 2 64,67, 0,85, +,+, 683468 LINE CR1 585 chrUn_NT_469879v1 1034 1189 CR1-Y4 512 + 1034 1189 0 2 65,70, 0,85, +,+, 683469 LINE CR1 585 chrUn_NT_469879v1 1314 3434 CR1-F2 477 + 1314 3434 0 3 96,9,98, 0,96,2022, +,+,+, 683471 LINE CR1 585 chrUn_NT_469879v1 1600 1831 CR1-Y2 552 + 1600 1831 0 2 60,90, 0,141, +,+, 683474 LINE CR1 585 chrUn_NT_469879v1 5688 6633 (CACTG)n 215 + 5688 6633 0 4 153,60,204,179, 0,349,432,766, +,+,+,+, 683485 Simple_repeat Simple_repeat 585 chrUn_NT_469879v1 6744 7147 (CACTG)n 381 + 6744 7147 0 2 185,218, 0,185, +,+, 683489 Simple_repeat Simple_repeat 585 chrUn_NT_469881v1 3127 6286 GGERV10_LTR 936 + 3127 6286 0 2 2947,212, 0,2947, +,+, 683496 LTR ERVL 585 chrUn_NT_469882v1 3316 3958 G-rich 421 + 3316 3958 0 2 37,558, 0,84, +,+, 683501 Low_complexity Low_complexity 585 chrUn_NT_469888v1 2046 4751 GGLTR3F1 936 + 2046 4751 0 2 2213,492, 0,2213, +,+, 683526 LTR ERVL 585 chrUn_NT_469888v1 4744 9383 GGXHOI 447 - 4744 9383 0 5 388,226,2446,509,986, 0,404,647,3108,3653, -,-,-,-,-, 683527 Satellite W-chromosome 585 chrUn_NT_469889v1 1682 3030 GGXHOI 425 - 1682 3030 0 4 424,393,146,337, 0,438,854,1011, -,-,-,-, 683531 Satellite W-chromosome 585 chrUn_NT_469889v1 4396 5711 GGXHOI 407 - 4396 5711 0 4 153,159,493,423, 0,204,378,892, -,-,-,-, 683534 Satellite W-chromosome 585 chrUn_NT_469889v1 8179 8779 (CGAGG)n 619 + 8179 8779 0 2 380,201, 0,399, +,+, 683539 Simple_repeat Simple_repeat 585 chrUn_NT_469890v1 3764 6424 (CTCTATGGGG)n 722 - 3764 6424 0 10 191,451,200,11,20,249,118,328,448,118, 0,251,742,1061,1191,1262,1552,1682,2032,2542, -,-,-,-,-,-,-,-,-,-, 683545 Satellite Satellite 585 chrUn_NT_469893v1 263 9375 GGERVL-B-int 913 - 263 9375 0 6 494,245,4938,488,1525,1264, 0,494,777,5716,6204,7848, -,-,-,-,-,-, 683555 LTR ERVL 585 chrUn_NT_469895v1 566 4899 GGXHOI 428 - 566 4899 0 6 245,293,998,641,1664,355, 0,308,621,1635,2297,3978, -,-,-,-,-,-, 683561 Satellite W-chromosome 585 chrUn_NT_469895v1 5464 9225 GGXHOI 400 - 5464 9225 0 2 826,2917, 0,844, -,-, 683563 Satellite W-chromosome 585 chrUn_NT_469896v1 3162 4911 GGERVL-C-int 718 - 3162 4911 0 2 603,466, 0,1283, -,-, 683568 LTR ERVL 585 chrUn_NT_469896v1 3760 4451 CR1-H2 833 + 3760 4451 0 2 46,643, 0,48, +,+, 683569 LINE CR1 585 chrUn_NT_469896v1 7836 9025 GGLTR3D 413 + 7836 9025 0 2 153,461, 0,728, +,+, 683573 LTR ERVL 585 chrUn_NT_469897v1 87 786 (CAAGG)n 468 + 87 786 0 3 344,124,12, 0,377,687, +,+,+, 683577 Simple_repeat Simple_repeat 585 chrUn_NT_469897v1 840 1288 (CCTTG)n 479 + 840 1288 0 2 200,215, 0,233, +,+, 683579 Simple_repeat Simple_repeat 585 chrUn_NT_469897v1 2266 4318 GGXHOI 365 - 2266 4318 0 3 509,1038,392, 0,564,1660, -,-,-, 683585 Satellite W-chromosome 585 chrUn_NT_469897v1 5377 7002 GGXHOI 385 - 5377 7002 0 2 516,1046, 0,579, -,-, 683588 Satellite W-chromosome 585 chrUn_NT_469897v1 7104 9367 GGXHOI 375 - 7104 9367 0 2 2070,175, 0,2088, -,-, 683589 Satellite W-chromosome 585 chrUn_NT_469898v1 577 1538 (CAAGG)n 647 + 577 1538 0 5 209,120,18,23,176, 0,211,537,735,785, +,+,+,+,+, 683592 Simple_repeat Simple_repeat 585 chrUn_NT_469898v1 1856 2878 (CAAGG)n 627 + 1856 2878 0 3 370,179,293, 0,370,729, +,+,+, 683598 Simple_repeat Simple_repeat 585 chrUn_NT_469898v1 2836 4166 (CAAGG)n 623 + 2836 4166 0 4 140,127,147,231, 0,318,462,1099, +,+,+,+, 683601 Simple_repeat Simple_repeat 585 chrUn_NT_469898v1 4201 4754 (CAAGG)n 630 + 4201 4754 0 3 189,162,22, 0,189,531, +,+,+, 683606 Simple_repeat Simple_repeat 585 chrUn_NT_469899v1 6940 8334 GGLTR7-int 334 - 6940 8334 0 3 286,204,104, 0,1061,1290, -,-,-, 683617 LTR ERV1 585 chrUn_NT_469900v1 6348 7812 GGXHOI 344 - 6348 7812 0 3 516,594,275, 0,578,1189, -,-,-, 683629 Satellite W-chromosome 585 chrUn_NT_469901v1 6780 7831 GGXHOI 372 - 6780 7831 0 2 517,471, 0,580, -,-, 683643 Satellite W-chromosome 585 chrUn_NT_469902v1 8234 9344 GGXHOI 287 - 8234 9344 0 3 131,574,368, 0,147,742, -,-,-, 683647 Satellite W-chromosome 585 chrUn_NT_469905v1 6985 7401 (GGATG)n 594 + 6985 7401 0 2 201,198, 0,218, +,+, 683669 Simple_repeat Simple_repeat 585 chrUn_NT_469905v1 7694 8087 (GGATG)n 676 + 7694 8087 0 2 189,189, 0,204, +,+, 683671 Simple_repeat Simple_repeat 585 chrUn_NT_469905v1 8235 8642 (GGATG)n 765 + 8235 8642 0 2 191,188, 0,219, +,+, 683673 Simple_repeat Simple_repeat 585 chrUn_NT_469911v1 6471 7092 CR1-H 673 - 6471 7092 0 2 139,476, 0,145, -,-, 683711 LINE CR1 585 chrUn_NT_469911v1 9029 9271 CR1-H 591 - 9029 9271 0 2 114,128, 0,114, -,-, 683715 LINE CR1 585 chrUn_NT_469912v1 2796 2972 CR1-F2 566 - 2796 2972 0 2 139,37, 0,139, -,-, 683717 LINE CR1 585 chrUn_NT_469912v1 5182 5976 GGERVL-A-int 388 + 5182 5976 0 3 96,90,109, 0,457,685, +,+,+, 683722 LTR ERVL 585 chrUn_NT_469913v1 7146 9333 GGXHOI 416 + 7146 9333 0 3 433,1249,470, 0,452,1717, +,+,+, 683729 Satellite W-chromosome 585 chrUn_NT_469917v1 4451 5083 GGERVK10-int 460 + 4451 5083 0 3 57,133,59, 0,274,573, +,+,+, 683748 LTR ERVK 585 chrUn_NT_469917v1 6109 6209 GGERV10_LTR 669 - 6109 6209 0 2 51,49, 0,51, -,-, 683753 LTR ERVL 585 chrUn_NT_469918v1 2725 3696 GGXHOI 390 - 2725 3696 0 4 335,191,143,245, 0,359,569,726, -,-,-,-, 683760 Satellite W-chromosome 585 chrUn_NT_469918v1 3779 8856 GGXHOI 379 - 3779 8856 0 3 2128,2508,406, 0,2143,4671, -,-,-, 683761 Satellite W-chromosome 585 chrUn_NT_469919v1 7978 8097 (G)n 750 + 7978 8097 0 2 31,30, 0,89, +,+, 683772 Simple_repeat Simple_repeat 585 chrUn_NT_469921v1 8151 9271 CR1-B2 712 - 8151 9271 0 2 893,224, 0,896, -,-, 683787 LINE CR1 585 chrUn_NT_469922v1 9060 9295 (ACCCCATAGGG)n 536 - 9060 9295 0 2 76,34, 0,201, -,-, 683793 Satellite Satellite 585 chrUn_NT_469923v1 5081 6205 GGLTR7-int 362 - 5081 6205 0 2 241,103, 0,1021, -,-, 683799 LTR ERV1 585 chrUn_NT_469923v1 7045 9334 GGERVL-B-int 686 - 7045 9334 0 3 972,1187,67, 0,1035,2222, -,-,-, 683801 LTR ERVL 585 chrUn_NT_469925v1 5322 6994 GGLTR3F1 961 + 5322 6994 0 2 1180,492, 0,1180, +,+, 683821 LTR ERVL 585 chrUn_NT_469925v1 6998 8659 GGLTR3F1 952 + 6998 8659 0 2 1169,492, 0,1169, +,+, 683822 LTR ERVL 585 chrUn_NT_469925v1 8663 9338 GGERVL-A-int 777 + 8663 9338 0 2 245,334, 0,341, +,+, 683823 LTR ERVL 585 chrUn_NT_469927v1 6382 6863 CR1-Y4 604 + 6382 6863 0 2 194,277, 0,204, +,+, 683829 LINE CR1 585 chrUn_NT_469928v1 512 817 (ACCCATAGGG)n 582 + 512 817 0 2 125,62, 0,243, +,+, 683833 Satellite Satellite 585 chrUn_NT_469928v1 1572 2025 (CTCTATGGGG)n 666 + 1572 2025 0 2 126,24, 0,429, +,+, 683839 Satellite Satellite 585 chrUn_NT_469928v1 3239 3694 (CTCTATGGGG)n 737 - 3239 3694 0 3 65,35,174, 0,185,281, -,-,-, 683850 Satellite Satellite 585 chrUn_NT_469928v1 4040 4497 (CTCTATGGGG)n 694 + 4040 4497 0 2 177,280, 0,177, +,+, 683854 Satellite Satellite 585 chrUn_NT_469928v1 5380 5971 (CTCTATGGGG)n 743 - 5380 5971 0 3 105,25,120, 0,392,471, -,-,-, 683861 Satellite Satellite 585 chrUn_NT_469928v1 5758 5999 (ACCCCATAGGG)n 522 + 5758 5999 0 2 93,28, 0,213, +,+, 683864 Satellite Satellite 585 chrUn_NT_469928v1 6187 6406 (CTCTATGGGG)n 754 - 6187 6406 0 2 65,35, 0,184, -,-, 683866 Satellite Satellite 585 chrUn_NT_469928v1 6468 6826 (CTCTATGGGG)n 712 + 6468 6826 0 2 177,181, 0,177, +,+, 683868 Satellite Satellite 585 chrUn_NT_469933v1 1181 1712 Sat-CR1_GG 178 - 1181 1712 0 2 106,163, 0,368, -,-, 683930 Satellite Satellite 585 chrUn_NT_469933v1 7813 8328 Sat-CR1_GG 134 - 7813 8328 0 2 123,187, 0,328, -,-, 683951 Satellite Satellite 585 chrUn_NT_469934v1 5573 8683 GGXHOI 576 + 5573 8683 0 3 25,28,370, 0,1927,2740, +,+,+, 683960 Satellite W-chromosome 585 chrUn_NT_469935v1 5702 6725 CR1-B2 661 - 5702 6725 0 2 793,227, 0,796, -,-, 683971 LINE CR1 585 chrUn_NT_469936v1 6411 9321 GGXHOI 363 - 6411 9321 0 4 309,1184,759,608, 0,327,1527,2302, -,-,-,-, 683976 Satellite W-chromosome 585 chrUn_NT_469937v1 1078 2063 GGXHOI 339 + 1078 2063 0 2 181,759, 0,226, +,+, 683979 Satellite W-chromosome 585 chrUn_NT_469938v1 2688 3484 (CAAGG)n 487 + 2688 3484 0 3 313,270,197, 0,313,599, +,+,+, 683999 Simple_repeat Simple_repeat 585 chrUn_NT_469938v1 3564 4632 (CCTTG)n 481 + 3564 4632 0 4 178,205,378,76, 0,221,438,992, +,+,+,+, 684000 Simple_repeat Simple_repeat 585 chrUn_NT_469938v1 5412 6043 (CAAGG)n 498 + 5412 6043 0 2 344,258, 0,373, +,+, 684006 Simple_repeat Simple_repeat 585 chrUn_NT_469938v1 8216 8821 (CAAGG)n 521 + 8216 8821 0 2 221,351, 0,254, +,+, 684015 Simple_repeat Simple_repeat 585 chrUn_NT_469940v1 1250 2696 GGXHOI 382 - 1250 2696 0 2 366,1058, 0,388, -,-, 684024 Satellite W-chromosome 585 chrUn_NT_469940v1 3353 9289 GGXHOI 373 - 3353 9289 0 10 1527,294,315,336,476,661,211,186,1448,305, 0,1545,1861,2188,2540,3028,3707,3932,4166,5631, -,-,-,-,-,-,-,-,-,-, 684026 Satellite W-chromosome 585 chrUn_NT_469941v1 510 1057 (GCCCCACAGCT)n 591 - 510 1057 0 2 129,393, 0,154, -,-, 684029 Satellite Satellite 585 chrUn_NT_469941v1 1148 1811 (GCCCCACAGCT)n 575 - 1148 1811 0 2 371,243, 0,420, -,-, 684030 Satellite Satellite 585 chrUn_NT_469941v1 4024 4498 (ACCCATAGGG)n 409 - 4024 4498 0 3 121,150,120, 0,184,354, -,-,-, 684035 Satellite Satellite 585 chrUn_NT_469941v1 4603 4841 (ACCCATAGGG)n 404 - 4603 4841 0 2 82,33, 0,205, -,-, 684036 Satellite Satellite 585 chrUn_NT_469941v1 5934 6220 (ACCCATAGGG)n 374 - 5934 6220 0 2 162,105, 0,181, -,-, 684041 Satellite Satellite 585 chrUn_NT_469941v1 6350 6630 (ACCCATAGGG)n 367 - 6350 6630 0 2 119,119, 0,161, -,-, 684042 Satellite Satellite 585 chrUn_NT_469941v1 6733 7017 (ACCCATAGGG)n 362 - 6733 7017 0 2 121,120, 0,164, -,-, 684043 Satellite Satellite 585 chrUn_NT_469944v1 8047 8368 (TTAGGG)n 384 + 8047 8368 0 2 72,208, 0,113, +,+, 684071 Simple_repeat Simple_repeat 585 chrUn_NT_469945v1 514 1707 GGXHOI 390 + 514 1707 0 4 377,236,237,275, 0,410,661,918, +,+,+,+, 684075 Satellite W-chromosome 585 chrUn_NT_469947v1 4080 4464 (CATTG)n 288 + 4080 4464 0 2 165,181, 0,203, +,+, 684097 Simple_repeat Simple_repeat 585 chrUn_NT_469947v1 4768 5547 (CATTG)n 272 + 4768 5547 0 4 111,75,50,180, 0,276,532,599, +,+,+,+, 684098 Simple_repeat Simple_repeat 585 chrUn_NT_469947v1 6816 6883 (C)n 902 + 6816 6883 0 2 21,21, 0,46, +,+, 684107 Simple_repeat Simple_repeat 585 chrUn_NT_469948v1 612 847 (CTCTATGGGG)n 458 - 612 847 0 2 59,57, 0,178, -,-, 684111 Satellite Satellite 585 chrUn_NT_469948v1 821 1816 (ACCCATAGGG)n 526 + 821 1816 0 5 39,42,314,245,281, 0,39,81,395,714, +,+,+,+,+, 684113 Satellite Satellite 585 chrUn_NT_469949v1 6289 9301 GGXHOI 364 + 6289 9301 0 3 1212,1434,284, 0,1252,2728, +,+,+, 684124 Satellite W-chromosome 585 chrUn_NT_469952v1 2266 2888 CR1-H 676 - 2266 2888 0 2 139,477, 0,145, -,-, 684152 LINE CR1 585 chrUn_NT_469952v1 5313 6567 CR1-H 691 - 5313 6567 0 3 117,416,705, 0,117,549, -,-,-, 684157 LINE CR1 585 chrUn_NT_469953v1 1930 2256 (CCTTG)n 473 + 1930 2256 0 2 193,116, 0,210, +,+, 684166 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 2609 3078 (CAAGG)n 595 + 2609 3078 0 3 46,223,174, 0,46,295, +,+,+, 684169 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 3077 3406 (CCTTG)n 545 + 3077 3406 0 2 133,179, 0,150, +,+, 684170 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 4028 4776 (CAAGG)n 446 + 4028 4776 0 3 245,213,228, 0,307,520, +,+,+, 684176 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 5157 5802 (CAAGG)n 527 + 5157 5802 0 2 336,309, 0,336, +,+, 684178 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 5855 6113 (CAAGG)n 483 + 5855 6113 0 2 24,178, 0,80, +,+, 684180 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 6269 7083 (CCTTG)n 493 + 6269 7083 0 2 181,608, 0,206, +,+, 684182 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 7651 8509 (CAAGG)n 506 + 7651 8509 0 2 371,487, 0,371, +,+, 684187 Simple_repeat Simple_repeat 585 chrUn_NT_469953v1 8791 9307 (CCTTG)n 414 + 8791 9307 0 2 202,286, 0,230, +,+, 684190 Simple_repeat Simple_repeat 585 chrUn_NT_469954v1 1431 2120 GGXHOI 392 - 1431 2120 0 2 99,579, 0,110, -,-, 684193 Satellite W-chromosome 585 chrUn_NT_469954v1 3400 4318 GGXHOI 374 - 3400 4318 0 2 293,583, 0,335, -,-, 684196 Satellite W-chromosome 585 chrUn_NT_469954v1 4839 6669 GGXHOI 390 - 4839 6669 0 5 376,399,155,483,283, 0,388,807,1021,1547, -,-,-,-,-, 684198 Satellite W-chromosome 585 chrUn_NT_469955v1 1133 1459 CR1-Y2 566 + 1133 1459 0 4 72,56,48,58, 0,136,206,268, +,+,+,+, 684208 LINE CR1 585 chrUn_NT_469955v1 1667 1796 CR1-Y2 670 + 1667 1796 0 2 57,58, 0,71, +,+, 684212 LINE CR1 585 chrUn_NT_469955v1 1875 2076 CR1-Y2 655 + 1875 2076 0 3 58,58,59, 0,72,142, +,+,+, 684214 LINE CR1 585 chrUn_NT_469955v1 2469 3559 CR1-H2 463 + 2469 3559 0 2 74,56, 0,1034, +,+, 684218 LINE CR1 585 chrUn_NT_469955v1 2798 2992 CR1-Y2 599 + 2798 2992 0 3 62,53,55, 0,68,139, +,+,+, 684222 LINE CR1 585 chrUn_NT_469955v1 3170 3421 CR1-Y2 643 + 3170 3421 0 4 55,57,58,57, 0,69,136,194, +,+,+,+, 684224 LINE CR1 585 chrUn_NT_469955v1 3575 3828 CR1-Y2 638 + 3575 3828 0 4 62,58,57,57, 0,69,139,196, +,+,+,+, 684226 LINE CR1 585 chrUn_NT_469955v1 3912 4116 CR1-Y2 675 + 3912 4116 0 3 58,54,54, 0,70,150, +,+,+, 684228 LINE CR1 585 chrUn_NT_469955v1 4182 4331 CR1-Y2 574 + 4182 4331 0 2 61,61, 0,88, +,+, 684229 LINE CR1 585 chrUn_NT_469955v1 6096 6362 CR1-Y2 547 + 6096 6362 0 2 51,84, 0,182, +,+, 684247 LINE CR1 585 chrUn_NT_469957v1 1107 2336 GGXHOI 423 - 1107 2336 0 2 319,874, 0,355, -,-, 684259 Satellite W-chromosome 585 chrUn_NT_469957v1 5366 9304 GGXHOI 387 - 5366 9304 0 3 1043,1017,1809, 0,1090,2129, -,-,-, 684262 Satellite W-chromosome 585 chrUn_NT_469958v1 1533 5738 GGXHOI 520 - 1533 5738 0 6 19,251,193,197,795,584, 0,826,1387,1986,2504,3621, -,-,-,-,-,-, 684266 Satellite W-chromosome 585 chrUn_NT_469958v1 5809 6775 GGXHOI 438 - 5809 6775 0 2 529,419, 0,547, -,-, 684272 Satellite W-chromosome 585 chrUn_NT_469958v1 7213 7744 GGXHOI 405 - 7213 7744 0 2 406,107, 0,424, -,-, 684274 Satellite W-chromosome 585 chrUn_NT_469960v1 4440 4551 G-rich 560 + 4440 4551 0 2 28,52, 0,59, +,+, 684287 Low_complexity Low_complexity 585 chrUn_NT_469961v1 318 1907 CR1-F 516 + 318 1907 0 5 199,202,156,198,197, 0,241,708,1150,1392, +,+,+,+,+, 684297 LINE CR1 585 chrUn_NT_469961v1 1950 9299 CR1-F 539 + 1950 9299 0 21 203,203,204,155,201,188,199,203,203,203,155,198,198,198,204,204,155,201,179,155,55, 0,245,490,960,1405,1651,1881,2378,2623,2868,3335,3779,4254,4750,4990,5236,5706,6151,6628,6851,7294, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 684300 LINE CR1 585 chrUn_NT_469962v1 612 714 (C)n 862 + 612 714 0 2 22,25, 0,77, +,+, 684317 Simple_repeat Simple_repeat 585 chrUn_NT_469964v1 1408 3369 GGXHOI 384 - 1408 3369 0 2 352,1592, 0,369, -,-, 684342 Satellite W-chromosome 585 chrUn_NT_469964v1 3468 5294 GGXHOI 364 - 3468 5294 0 3 337,146,1309, 0,354,517, -,-,-, 684343 Satellite W-chromosome 585 chrUn_NT_469964v1 5769 7822 GGXHOI 358 - 5769 7822 0 3 429,1207,378, 0,445,1675, -,-,-, 684344 Satellite W-chromosome 585 chrUn_NT_469964v1 8692 9278 GGXHOI 307 - 8692 9278 0 2 144,425, 0,161, -,-, 684346 Satellite W-chromosome 585 chrUn_NT_469965v1 1504 2712 (CGAGG)n 530 + 1504 2712 0 4 176,261,176,526, 0,211,486,682, +,+,+,+, 684351 Simple_repeat Simple_repeat 585 chrUn_NT_469965v1 2771 3806 (CGAGG)n 526 + 2771 3806 0 5 116,108,175,185,180, 0,286,441,636,855, +,+,+,+,+, 684353 Simple_repeat Simple_repeat 585 chrUn_NT_469965v1 4167 4570 (CGAGG)n 491 + 4167 4570 0 2 185,180, 0,223, +,+, 684356 Simple_repeat Simple_repeat 585 chrUn_NT_469965v1 5732 7337 (CGAGG)n 491 + 5732 7337 0 3 589,598,358, 0,604,1247, +,+,+, 684360 Simple_repeat Simple_repeat 585 chrUn_NT_469965v1 7355 7663 (GGCGG)n 234 + 7355 7663 0 2 85,149, 0,159, +,+, 684361 Simple_repeat Simple_repeat 585 chrUn_NT_469965v1 8508 9267 (CGAGG)n 544 + 8508 9267 0 3 174,172,373, 0,199,386, +,+,+, 684368 Simple_repeat Simple_repeat 585 chrUn_NT_469966v1 434 2444 GGXHOI 325 + 434 2444 0 3 1051,453,420, 0,1111,1590, +,+,+, 684371 Satellite W-chromosome 585 chrUn_NT_469966v1 8071 9296 GGXHOI 341 + 8071 9296 0 3 421,596,132, 0,438,1093, +,+,+, 684379 Satellite W-chromosome 585 chrUn_NT_469967v1 5598 6221 CR1-H 675 - 5598 6221 0 2 139,478, 0,145, -,-, 684384 LINE CR1 585 chrUn_NT_469968v1 4188 5320 CR1-B2 681 - 4188 5320 0 2 904,224, 0,908, -,-, 684394 LINE CR1 585 chrUn_NT_469970v1 5302 9284 GGXHOI 364 - 5302 9284 0 3 1408,769,1764, 0,1435,2218, -,-,-, 684406 Satellite W-chromosome 585 chrUn_NT_469972v1 3892 4173 CR1-X2 358 + 3892 4173 0 2 65,216, 0,65, +,+, 684433 LINE CR1 585 chrUn_NT_469975v1 377 1064 (CAGGC)n 533 + 377 1064 0 3 212,50,207, 0,394,480, +,+,+, 684475 Simple_repeat Simple_repeat 585 chrUn_NT_469975v1 1504 1914 (CAAGG)n 631 + 1504 1914 0 2 175,233, 0,177, +,+, 684480 Simple_repeat Simple_repeat 585 chrUn_NT_469975v1 2109 2374 (CAAGG)n 687 + 2109 2374 0 2 187,67, 0,198, +,+, 684482 Simple_repeat Simple_repeat 585 chrUn_NT_469976v1 331 5677 GGXHOI 443 - 331 5677 0 3 1247,1763,2301, 0,1265,3045, -,-,-, 684494 Satellite W-chromosome 585 chrUn_NT_469977v1 607 1185 (CATTG)n 367 + 607 1185 0 3 178,178,178, 0,200,400, +,+,+, 684498 Simple_repeat Simple_repeat 585 chrUn_NT_469977v1 2118 2806 (CATTG)n 308 + 2118 2806 0 3 147,182,181, 0,313,507, +,+,+, 684502 Simple_repeat Simple_repeat 585 chrUn_NT_469978v1 3720 3936 Char12Mar1_GG 525 - 3720 3936 0 2 42,174, 0,42, -,-, 684510 DNA hAT-Charlie 585 chrUn_NT_469979v1 4401 4778 GGXHOI 427 - 4401 4778 0 2 76,257, 0,120, -,-, 684514 Satellite W-chromosome 585 chrUn_NT_469979v1 5849 8733 GGXHOI 345 - 5849 8733 0 4 573,968,1039,239, 0,595,1582,2645, -,-,-,-, 684516 Satellite W-chromosome 585 chrUn_NT_469980v1 4569 5063 A-rich 467 + 4569 5063 0 2 421,38, 0,456, +,+, 684533 Low_complexity Low_complexity 585 chrUn_NT_469981v1 2535 3528 GGXHOI 351 + 2535 3528 0 2 456,517, 0,476, +,+, 684550 Satellite W-chromosome 585 chrUn_NT_469981v1 3669 4700 GGXHOI 371 + 3669 4700 0 2 708,302, 0,729, +,+, 684551 Satellite W-chromosome 585 chrUn_NT_469981v1 5932 6659 (CAAGG)n 443 + 5932 6659 0 2 252,448, 0,279, +,+, 684555 Simple_repeat Simple_repeat 585 chrUn_NT_469981v1 7286 8072 (CCTTG)n 421 + 7286 8072 0 3 177,396,141, 0,227,645, +,+,+, 684558 Simple_repeat Simple_repeat 585 chrUn_NT_469981v1 8550 9274 (CAAGG)n 438 + 8550 9274 0 2 193,492, 0,232, +,+, 684561 Simple_repeat Simple_repeat 585 chrUn_NT_469982v1 5493 9176 GGXHOI 361 - 5493 9176 0 7 242,1015,582,500,549,484,141, 0,285,1346,1963,2480,3047,3542, -,-,-,-,-,-,-, 684563 Satellite W-chromosome 585 chrUn_NT_469984v1 1774 3818 GGXHOI 442 + 1774 3818 0 3 1586,153,216, 0,1646,1828, +,+,+, 684577 Satellite W-chromosome 585 chrUn_NT_469984v1 5437 8574 GGXHOI 513 + 5437 8574 0 4 1003,490,899,592, 0,1044,1584,2545, +,+,+,+, 684581 Satellite W-chromosome 585 chrUn_NT_469984v1 8650 9266 GGXHOI 512 + 8650 9266 0 2 116,313, 0,303, +,+, 684582 Satellite W-chromosome 585 chrUn_NT_469985v1 5475 7981 GGXHOI 394 + 5475 7981 0 2 1717,772, 0,1734, +,+, 684587 Satellite W-chromosome 585 chrUn_NT_469985v1 8099 8876 GGXHOI 312 + 8099 8876 0 2 410,332, 0,445, +,+, 684589 Satellite W-chromosome 585 chrUn_NT_469987v1 457 1045 (CGAGG)n 563 + 457 1045 0 2 179,365, 0,223, +,+, 684600 Simple_repeat Simple_repeat 585 chrUn_NT_469987v1 3151 3827 (CGAGG)n 481 + 3151 3827 0 2 308,357, 0,319, +,+, 684609 Simple_repeat Simple_repeat 585 chrUn_NT_469987v1 4709 5451 (CGAGG)n 560 + 4709 5451 0 3 171,348,172, 0,210,570, +,+,+, 684612 Simple_repeat Simple_repeat 585 chrUn_NT_469987v1 5639 6021 (CGAGG)n 437 + 5639 6021 0 2 194,174, 0,208, +,+, 684614 Simple_repeat Simple_repeat 585 chrUn_NT_469987v1 6526 8476 (CGAGG)n 483 + 6526 8476 0 3 1271,257,193, 0,1321,1757, +,+,+, 684616 Simple_repeat Simple_repeat 585 chrUn_NT_469988v1 1888 6919 GGXHOI 387 - 1888 6919 0 10 1321,1608,267,98,213,624,177,236,126,170, 0,1336,2983,3296,3405,3640,4277,4470,4721,4861, -,-,-,-,-,-,-,-,-,-, 684624 Satellite W-chromosome 585 chrUn_NT_469988v1 7824 8309 GGXHOI 376 - 7824 8309 0 2 298,130, 0,355, -,-, 684626 Satellite W-chromosome 585 chrUn_NT_469991v1 7881 8246 (CCCCAA)n 518 + 7881 8246 0 2 120,62, 0,303, +,+, 684684 Simple_repeat Simple_repeat 585 chrUn_NT_469993v1 492 943 (ACCCCATAGGG)n 477 - 492 943 0 2 118,333, 0,118, -,-, 684700 Satellite Satellite 585 chrUn_NT_469993v1 1145 2689 (ACCCCATAGGG)n 476 - 1145 2689 0 7 178,279,367,189,13,62,118, 0,178,494,898,1198,1327,1426, -,-,-,-,-,-,-, 684702 Satellite Satellite 585 chrUn_NT_469993v1 2232 2472 (ACCCATAGGG)n 485 - 2232 2472 0 2 111,116, 0,124, -,-, 684703 Satellite Satellite 585 chrUn_NT_469993v1 6692 6912 (ACCCCATAGGG)n 605 - 6692 6912 0 2 124,44, 0,176, -,-, 684709 Satellite Satellite 585 chrUn_NT_469996v1 7595 8273 GGXHOI 398 - 7595 8273 0 2 125,514, 0,164, -,-, 684714 Satellite W-chromosome 585 chrUn_NT_469998v1 3546 4206 GGLTR11-int 499 + 3546 4206 0 2 125,224, 0,436, +,+, 684729 LTR ERV1 585 chrUn_NT_469999v1 255 5864 GGXHOI 402 - 255 5864 0 6 1510,463,306,802,851,1587, 0,1526,2012,2335,3149,4022, -,-,-,-,-,-, 684737 Satellite W-chromosome 585 chrUn_NT_469999v1 5959 9197 GGXHOI 375 - 5959 9197 0 6 301,342,416,150,944,992, 0,324,682,1114,1281,2246, -,-,-,-,-,-, 684738 Satellite W-chromosome 585 chrUn_NT_470000v1 745 979 (CCCCATTGGG)n 386 + 745 979 0 2 57,68, 0,166, +,+, 684742 Satellite Satellite 585 chrUn_NT_470000v1 1300 1565 (CCCCATTGGG)n 300 + 1300 1565 0 2 118,116, 0,149, +,+, 684744 Satellite Satellite 585 chrUn_NT_470000v1 2442 2803 (CCCCATTGGG)n 345 + 2442 2803 0 3 118,111,99, 0,129,262, +,+,+, 684746 Satellite Satellite 585 chrUn_NT_470000v1 3677 3941 (CCCCATTGGG)n 449 + 3677 3941 0 2 108,108, 0,156, +,+, 684748 Satellite Satellite 585 chrUn_NT_470000v1 7765 8189 (ACCCATTGGG)n 342 - 7765 8189 0 2 262,65, 0,359, -,-, 684755 Satellite Satellite 585 chrUn_NT_470000v1 8027 8277 (CCCCATTGGG)n 490 - 8027 8277 0 2 97,131, 0,119, -,-, 684756 Satellite Satellite 585 chrUn_NT_470000v1 8920 9231 (ACCCATTGGG)n 405 - 8920 9231 0 2 138,113, 0,198, -,-, 684759 Satellite Satellite 585 chrUn_NT_470002v1 6174 7270 GGXHOI 362 + 6174 7270 0 2 888,186, 0,910, +,+, 684766 Satellite W-chromosome 585 chrUn_NT_470003v1 1288 4534 GGXHOI 335 - 1288 4534 0 5 488,538,717,1078,357, 0,504,1056,1785,2889, -,-,-,-,-, 684770 Satellite W-chromosome 585 chrUn_NT_470003v1 4559 9153 ENS1-LTR 868 - 4559 9153 0 3 925,2761,902, 0,930,3692, -,-,-, 684771 LTR ERVL 585 chrUn_NT_470006v1 4653 5769 GGXHOI 311 - 4653 5769 0 3 214,585,261, 0,230,855, -,-,-, 684785 Satellite W-chromosome 585 chrUn_NT_470007v1 219 1847 GGXHOI 381 - 219 1847 0 3 1026,335,230, 0,1049,1398, -,-,-, 684793 Satellite W-chromosome 585 chrUn_NT_470007v1 1998 2505 GGXHOI 360 - 1998 2505 0 2 349,144, 0,363, -,-, 684794 Satellite W-chromosome 585 chrUn_NT_470007v1 2587 8049 GGXHOI 353 - 2587 8049 0 6 501,813,488,554,1913,1110, 0,523,1351,1858,2425,4352, -,-,-,-,-,-, 684795 Satellite W-chromosome 585 chrUn_NT_470007v1 8147 9000 GGXHOI 354 - 8147 9000 0 2 293,538, 0,315, -,-, 684796 Satellite W-chromosome 585 chrUn_NT_470008v1 1561 2070 GGXHOI 455 - 1561 2070 0 2 272,222, 0,287, -,-, 684799 Satellite W-chromosome 585 chrUn_NT_470008v1 2158 4303 GGXHOI 398 - 2158 4303 0 9 142,131,357,362,134,248,257,137,131, 0,185,332,708,1122,1302,1565,1835,2014, -,-,-,-,-,-,-,-,-, 684800 Satellite W-chromosome 585 chrUn_NT_470008v1 4975 6816 GGXHOI 414 - 4975 6816 0 6 138,372,240,185,512,215, 0,187,575,828,1059,1626, -,-,-,-,-,-, 684802 Satellite W-chromosome 585 chrUn_NT_470008v1 6945 7751 GGXHOI 378 - 6945 7751 0 2 476,295, 0,511, -,-, 684803 Satellite W-chromosome 585 chrUn_NT_470008v1 7878 9257 GGXHOI 394 - 7878 9257 0 5 133,177,526,131,304, 0,155,348,928,1075, -,-,-,-,-, 684804 Satellite W-chromosome 585 chrUn_NT_470011v1 3464 4087 CR1-H 685 - 3464 4087 0 2 139,478, 0,145, -,-, 684818 LINE CR1 585 chrUn_NT_470011v1 7452 7909 CR1-H 677 - 7452 7909 0 2 163,294, 0,163, -,-, 684822 LINE CR1 585 chrUn_NT_470012v1 2195 2727 A-rich 570 + 2195 2727 0 2 459,38, 0,494, +,+, 684832 Low_complexity Low_complexity 585 chrUn_NT_470013v1 214 617 (CAAGG)n 535 + 214 617 0 2 184,219, 0,184, +,+, 684853 Simple_repeat Simple_repeat 585 chrUn_NT_470013v1 820 1349 (CAAGG)n 410 + 820 1349 0 3 125,19,27, 0,303,502, +,+,+, 684856 Simple_repeat Simple_repeat 585 chrUn_NT_470013v1 1372 2072 (CAGGC)n 550 + 1372 2072 0 4 174,224,277,10, 0,174,402,690, +,+,+,+, 684859 Simple_repeat Simple_repeat 585 chrUn_NT_470013v1 2137 2784 (CAGGC)n 487 + 2137 2784 0 3 203,216,196, 0,222,451, +,+,+, 684861 Simple_repeat Simple_repeat 585 chrUn_NT_470013v1 2829 3269 (CAAGG)n 612 + 2829 3269 0 2 218,36, 0,404, +,+, 684862 Simple_repeat Simple_repeat 585 chrUn_NT_470013v1 3289 4179 CR1-F0 882 + 3289 4179 0 2 758,132, 0,758, +,+, 684864 LINE CR1 585 chrUn_NT_470015v1 4668 6433 GGERVL-A-int 724 - 4668 6433 0 2 1302,463, 0,1302, -,-, 684883 LTR ERVL 585 chrUn_NT_470018v1 3788 9245 GGXHOI 382 - 3788 9245 0 6 1217,638,1136,199,506,1644, 0,1263,1916,3067,3292,3813, -,-,-,-,-,-, 684929 Satellite W-chromosome 585 chrUn_NT_470019v1 528 1344 GGXHOI 318 - 528 1344 0 3 220,162,395, 0,237,421, -,-,-, 684931 Satellite W-chromosome 585 chrUn_NT_470019v1 1497 3008 GGXHOI 325 - 1497 3008 0 5 124,121,150,176,747, 0,170,345,547,764, -,-,-,-,-, 684932 Satellite W-chromosome 585 chrUn_NT_470019v1 3351 4009 GGXHOI 383 - 3351 4009 0 2 352,253, 0,405, -,-, 684934 Satellite W-chromosome 585 chrUn_NT_470019v1 4079 4750 GGXHOI 294 - 4079 4750 0 3 130,150,320, 0,167,351, -,-,-, 684935 Satellite W-chromosome 585 chrUn_NT_470019v1 4837 5400 GGXHOI 422 - 4837 5400 0 2 480,65, 0,498, -,-, 684936 Satellite W-chromosome 585 chrUn_NT_470019v1 5499 6293 GGXHOI 341 - 5499 6293 0 5 130,61,177,143,234, 0,141,216,405,560, -,-,-,-,-, 684937 Satellite W-chromosome 585 chrUn_NT_470019v1 6380 7224 GGXHOI 373 - 6380 7224 0 4 250,94,130,284, 0,300,415,560, -,-,-,-, 684938 Satellite W-chromosome 585 chrUn_NT_470019v1 7422 9251 GGXHOI 360 - 7422 9251 0 2 813,995, 0,834, -,-, 684939 Satellite W-chromosome 585 chrUn_NT_470020v1 416 1115 (CCTTG)n 455 + 416 1115 0 3 97,350,188, 0,123,511, +,+,+, 684943 Simple_repeat Simple_repeat 585 chrUn_NT_470020v1 8290 9099 (CCTTG)n 550 + 8290 9099 0 4 212,147,196,221, 0,245,392,588, +,+,+,+, 684950 Simple_repeat Simple_repeat 585 chrUn_NT_470021v1 8024 9212 CR1-F 503 + 8024 9212 0 4 199,198,202,204, 0,500,740,984, +,+,+,+, 684966 LINE CR1 585 chrUn_NT_470022v1 3015 5241 CR1-Y 502 - 3015 5241 0 2 193,312, 0,1914, -,-, 684971 LINE CR1 585 chrUn_NT_470023v1 332 2747 GGXHOI 371 + 332 2747 0 3 314,261,1747, 0,355,668, +,+,+, 684977 Satellite W-chromosome 585 chrUn_NT_470023v1 3257 9087 GGXHOI 444 + 3257 9087 0 2 508,5303, 0,527, +,+, 684980 Satellite W-chromosome 585 chrUn_NT_470028v1 1213 1656 GGLTR7A 806 - 1213 1656 0 2 265,175, 0,268, -,-, 684998 LTR ERV1 585 chrUn_NT_470028v1 3664 3928 (CAGGC)n 416 + 3664 3928 0 2 207,46, 0,218, +,+, 685007 Simple_repeat Simple_repeat 585 chrUn_NT_470028v1 4845 5225 (CAGGC)n 533 + 4845 5225 0 2 167,213, 0,167, +,+, 685011 Simple_repeat Simple_repeat 585 chrUn_NT_470028v1 5630 6201 (CAAGG)n 517 + 5630 6201 0 3 178,136,79, 0,178,492, +,+,+, 685013 Simple_repeat Simple_repeat 585 chrUn_NT_470029v1 3361 4329 GGXHOI 390 - 3361 4329 0 2 403,507, 0,461, -,-, 685024 Satellite W-chromosome 585 chrUn_NT_470029v1 4425 5242 GGXHOI 384 - 4425 5242 0 2 357,404, 0,413, -,-, 685025 Satellite W-chromosome 585 chrUn_NT_470029v1 5771 6181 GGXHOI 347 - 5771 6181 0 2 167,215, 0,195, -,-, 685027 Satellite W-chromosome 585 chrUn_NT_470029v1 6263 7420 GGXHOI 329 - 6263 7420 0 3 275,462,333, 0,305,824, -,-,-, 685028 Satellite W-chromosome 585 chrUn_NT_470030v1 2310 2837 CR1-H2 566 - 2310 2837 0 3 394,65,43, 0,419,484, -,-,-, 685036 LINE CR1 585 chrUn_NT_470032v1 4732 5847 CR1-B2 675 + 4732 5847 0 2 217,895, 0,220, +,+, 685048 LINE CR1 585 chrUn_NT_470034v1 1999 2244 CR1-X1 492 + 1999 2244 0 2 60,117, 0,128, +,+, 685057 LINE CR1 585 chrUn_NT_470035v1 52 9228 GGXHOI 545 + 52 9228 0 17 874,24,248,15,480,929,485,458,365,50,309,94,148,299,148,240,22, 0,1178,1236,1542,1727,2265,3395,4554,5686,6093,6350,6690,7099,7258,8231,8427,9154, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 685063 Satellite W-chromosome 585 chrUn_NT_470036v1 604 7197 Z-REP 893 - 604 7197 0 2 4613,1921, 0,4672, -,-, 685074 Satellite macro 585 chrUn_NT_470037v1 4680 5708 CR1-Y4 361 + 4680 5708 0 2 237,788, 0,240, +,+, 685083 LINE CR1 585 chrUn_NT_470040v1 5769 6561 GGXHOI 389 - 5769 6561 0 2 482,260, 0,532, -,-, 685116 Satellite W-chromosome 585 chrUn_NT_470040v1 6804 9185 GGXHOI 396 - 6804 9185 0 3 182,1132,1021, 0,197,1360, -,-,-, 685117 Satellite W-chromosome 585 chrUn_NT_470042v1 1168 2141 GGXHOI 435 + 1168 2141 0 3 494,342,69, 0,512,904, +,+,+, 685123 Satellite W-chromosome 585 chrUn_NT_470042v1 3682 4210 GGXHOI 379 + 3682 4210 0 2 126,348, 0,180, +,+, 685125 Satellite W-chromosome 585 chrUn_NT_470042v1 4856 5639 GGXHOI 338 + 4856 5639 0 2 496,245, 0,538, +,+, 685127 Satellite W-chromosome 585 chrUn_NT_470042v1 6353 9225 GGXHOI 385 + 6353 9225 0 3 1937,768,121, 0,1960,2751, +,+,+, 685129 Satellite W-chromosome 585 chrUn_NT_470043v1 106 246 (GGGCGCTATG)n 835 + 106 246 0 2 43,45, 0,95, +,+, 685131 Simple_repeat Simple_repeat 585 chrUn_NT_470043v1 750 1564 (CTCTATGGGG)n 854 + 750 1564 0 6 99,110,50,118,108,118, 0,144,289,374,540,696, +,+,+,+,+,+, 685136 Satellite Satellite 585 chrUn_NT_470043v1 2057 2425 (ACCCCATAGGG)n 450 + 2057 2425 0 2 139,167, 0,201, +,+, 685139 Satellite Satellite 585 chrUn_NT_470043v1 2722 2996 (ACCCATAGGG)n 400 + 2722 2996 0 2 138,125, 0,149, +,+, 685141 Satellite Satellite 585 chrUn_NT_470043v1 3067 3373 (ACCCCATAGGG)n 431 + 3067 3373 0 2 156,137, 0,169, +,+, 685142 Satellite Satellite 585 chrUn_NT_470043v1 3626 4413 (ACCCCATAGGG)n 442 + 3626 4413 0 2 336,443, 0,344, +,+, 685144 Satellite Satellite 585 chrUn_NT_470045v1 2833 5629 GGXHOI 452 + 2833 5629 0 2 2298,482, 0,2314, +,+, 685153 Satellite W-chromosome 585 chrUn_NT_470045v1 5811 6662 GGXHOI 416 + 5811 6662 0 2 564,269, 0,582, +,+, 685154 Satellite W-chromosome 585 chrUn_NT_470045v1 6880 9009 GGXHOI 405 + 6880 9009 0 3 490,752,827, 0,510,1302, +,+,+, 685155 Satellite W-chromosome 585 chrUn_NT_470046v1 614 3825 GGXHOI 515 - 614 3825 0 6 234,294,194,367,193,595, 0,634,1252,1769,2411,2616, -,-,-,-,-,-, 685159 Satellite W-chromosome 585 chrUn_NT_470046v1 4248 5170 GGXHOI 484 - 4248 5170 0 2 171,567, 0,355, -,-, 685165 Satellite W-chromosome 585 chrUn_NT_470046v1 5212 7194 GGXHOI 524 - 5212 7194 0 4 268,247,185,283, 0,657,1227,1699, -,-,-,-, 685168 Satellite W-chromosome 585 chrUn_NT_470046v1 7268 9217 GGXHOI 526 - 7268 9217 0 3 876,185,279, 0,1200,1670, -,-,-, 685172 Satellite W-chromosome 585 chrUn_NT_470047v1 1167 2011 (CGAGG)n 432 + 1167 2011 0 2 436,393, 0,451, +,+, 685180 Simple_repeat Simple_repeat 585 chrUn_NT_470047v1 3580 4283 (CGAGG)n 459 + 3580 4283 0 3 181,231,182, 0,241,521, +,+,+, 685189 Simple_repeat Simple_repeat 585 chrUn_NT_470047v1 4569 4956 (CGAGG)n 468 + 4569 4956 0 2 173,185, 0,202, +,+, 685191 Simple_repeat Simple_repeat 585 chrUn_NT_470047v1 6997 7829 (CGAGG)n 477 + 6997 7829 0 3 176,186,366, 0,231,466, +,+,+, 685197 Simple_repeat Simple_repeat 585 chrUn_NT_470048v1 1374 2987 GGXHOI 420 - 1374 2987 0 5 302,423,140,496,160, 0,321,767,945,1453, -,-,-,-,-, 685204 Satellite W-chromosome 585 chrUn_NT_470048v1 3111 6564 GGXHOI 383 - 3111 6564 0 3 875,514,1985, 0,892,1468, -,-,-, 685205 Satellite W-chromosome 585 chrUn_NT_470048v1 6700 8747 GGXHOI 413 - 6700 8747 0 5 363,171,697,582,147, 0,379,567,1279,1900, -,-,-,-,-, 685206 Satellite W-chromosome 585 chrUn_NT_470049v1 5424 5987 CR1-X 441 - 5424 5987 0 3 214,132,171, 0,260,392, -,-,-, 685212 LINE CR1 585 chrUn_NT_470050v1 7679 9185 GGXHOI 393 + 7679 9185 0 3 213,392,799, 0,258,707, +,+,+, 685215 Satellite W-chromosome 585 chrUn_NT_470051v1 6879 8196 CR1-X 464 - 6879 8196 0 4 218,132,90,90, 0,260,392,1227, -,-,-,-, 685222 LINE CR1 585 chrUn_NT_470052v1 1581 3734 GGXHOI 374 - 1581 3734 0 2 1079,1012, 0,1141, -,-, 685227 Satellite W-chromosome 585 chrUn_NT_470052v1 7828 8849 GGXHOI 360 - 7828 8849 0 2 874,132, 0,889, -,-, 685232 Satellite W-chromosome 585 chrUn_NT_470054v1 4142 4264 (CGCACG)n 180 + 4142 4264 0 2 70,23, 0,99, +,+, 685251 Simple_repeat Simple_repeat 585 chrUn_NT_470054v1 5979 6397 (GGATG)n 748 + 5979 6397 0 2 196,187, 0,231, +,+, 685258 Simple_repeat Simple_repeat 585 chrUn_NT_470056v1 4283 7710 GGLTR7-int 428 + 4283 7710 0 4 102,1628,948,164, 0,567,2268,3263, +,+,+,+, 685269 LTR ERV1 585 chrUn_NT_470057v1 2125 3661 GGXHOI 401 - 2125 3661 0 2 217,1300, 0,236, -,-, 685273 Satellite W-chromosome 585 chrUn_NT_470057v1 4291 5003 (TTAGGG)n 535 + 4291 5003 0 3 334,174,178, 0,348,534, +,+,+, 685277 Simple_repeat Simple_repeat 585 chrUn_NT_470057v1 5359 7395 (TTAGGG)n 582 + 5359 7395 0 6 515,187,46,590,372,71, 0,545,913,979,1581,1965, +,+,+,+,+,+, 685280 Simple_repeat Simple_repeat 585 chrUn_NT_470057v1 7394 8398 (CCCTAA)n 677 + 7394 8398 0 3 242,180,571, 0,253,433, +,+,+, 685282 Simple_repeat Simple_repeat 585 chrUn_NT_470057v1 8452 9203 (CCCTAA)n 604 + 8452 9203 0 3 184,184,301, 0,230,450, +,+,+, 685284 Simple_repeat Simple_repeat 585 chrUn_NT_470058v1 3749 6159 GGLTR7-int 358 + 3749 6159 0 3 412,1162,786, 0,449,1624, +,+,+, 685288 LTR ERV1 585 chrUn_NT_470058v1 6335 8521 GGLTR10D-int 845 - 6335 8521 0 2 349,1834, 0,352, -,-, 685290 LTR ERVK 585 chrUn_NT_470058v1 8583 9064 (CGAGG)n 561 + 8583 9064 0 2 288,178, 0,303, +,+, 685292 Simple_repeat Simple_repeat 585 chrUn_NT_470059v1 279 840 A-rich 625 + 279 840 0 2 474,46, 0,515, +,+, 685295 Low_complexity Low_complexity 585 chrUn_NT_470059v1 8319 8906 A-rich 441 + 8319 8906 0 2 92,472, 0,115, +,+, 685316 Low_complexity Low_complexity 585 chrUn_NT_470061v1 2813 4169 CR1-H 652 - 2813 4169 0 2 117,1239, 0,117, -,-, 685329 LINE CR1 585 chrUn_NT_470062v1 6630 6908 CR1-X1 380 - 6630 6908 0 2 215,63, 0,215, -,-, 685339 LINE CR1 585 chrUn_NT_470063v1 2880 4126 CR1-H 592 + 2880 4126 0 2 1133,113, 0,1133, +,+, 685347 LINE CR1 585 chrUn_NT_470064v1 2840 9198 Z-REP 743 - 2840 9198 0 2 4675,1648, 0,4710, -,-, 685355 Satellite macro 585 chrUn_NT_470065v1 6795 8302 (GCCTG)n 548 + 6795 8302 0 5 161,44,18,16,36, 0,612,838,1277,1471, +,+,+,+,+, 685363 Simple_repeat Simple_repeat 585 chrUn_NT_470065v1 7651 8072 (CCTTG)n 582 + 7651 8072 0 2 102,186, 0,235, +,+, 685367 Simple_repeat Simple_repeat 585 chrUn_NT_470065v1 8417 8730 (GCCTG)n 684 + 8417 8730 0 2 57,256, 0,57, +,+, 685370 Simple_repeat Simple_repeat 585 chrUn_NT_470066v1 6255 6404 GGERVL-C-int 409 - 6255 6404 0 2 98,51, 0,98, -,-, 685384 LTR ERVL 585 chrUn_NT_470066v1 7712 7960 CR1-X 417 - 7712 7960 0 2 79,169, 0,79, -,-, 685385 LINE CR1 585 chrUn_NT_470067v1 5191 5973 (CCTTG)n 637 + 5191 5973 0 3 179,364,176, 0,202,606, +,+,+, 685398 Simple_repeat Simple_repeat 585 chrUn_NT_470067v1 6685 8241 (CCTTG)n 577 + 6685 8241 0 4 291,260,217,561, 0,468,767,995, +,+,+,+, 685402 Simple_repeat Simple_repeat 585 chrUn_NT_470067v1 8448 9143 (GCCTG)n 551 + 8448 9143 0 3 195,232,65, 0,221,630, +,+,+, 685406 Simple_repeat Simple_repeat 585 chrUn_NT_470069v1 7599 8725 CR1-B2 685 - 7599 8725 0 2 898,225, 0,901, -,-, 685441 LINE CR1 585 chrUn_NT_470071v1 6134 9083 GGXHOI 399 - 6134 9083 0 6 227,623,425,127,253,1114, 0,265,910,1392,1536,1835, -,-,-,-,-,-, 685479 Satellite W-chromosome 585 chrUn_NT_470072v1 3378 4760 Sat-CR1_GG 170 - 3378 4760 0 2 409,142, 0,1240, -,-, 685483 Satellite Satellite 585 chrUn_NT_470072v1 4711 9190 GGXHOI 563 - 4711 9190 0 6 224,49,277,247,373,15, 0,1000,1092,1941,2792,4464, -,-,-,-,-,-, 685485 Satellite W-chromosome 585 chrUn_NT_470073v1 3608 6880 GGXHOI 369 - 3608 6880 0 6 111,450,331,259,732,1270, 0,132,598,946,1231,2002, -,-,-,-,-,-, 685491 Satellite W-chromosome 585 chrUn_NT_470073v1 7121 9183 GGXHOI 425 - 7121 9183 0 3 999,317,716, 0,1015,1346, -,-,-, 685492 Satellite W-chromosome 585 chrUn_NT_470074v1 648 1120 (ACCCATAGAG)n 551 - 648 1120 0 3 144,232,96, 0,144,376, -,-,-, 685496 Satellite Satellite 585 chrUn_NT_470074v1 1770 2250 (ACCCATTGGG)n 662 - 1770 2250 0 2 146,168, 0,312, -,-, 685498 Satellite Satellite 585 chrUn_NT_470074v1 2085 2429 (ACCCCATAGGG)n 492 - 2085 2429 0 2 231,113, 0,231, -,-, 685500 Satellite Satellite 585 chrUn_NT_470074v1 2263 2874 (ACCCATTGGG)n 688 + 2263 2874 0 4 123,35,11,53, 0,234,402,558, +,+,+,+, 685501 Satellite Satellite 585 chrUn_NT_470074v1 2532 2821 (CCCCATTGGG)n 571 - 2532 2821 0 2 133,145, 0,144, -,-, 685503 Satellite Satellite 585 chrUn_NT_470074v1 2919 3910 (ACCCATTGGG)n 588 - 2919 3910 0 3 373,122,381, 0,373,610, -,-,-, 685504 Satellite Satellite 585 chrUn_NT_470074v1 3914 4152 (ACCCATTGGG)n 588 + 3914 4152 0 2 81,31, 0,207, +,+, 685507 Satellite Satellite 585 chrUn_NT_470074v1 4853 4954 G-rich 508 + 4853 4954 0 2 42,41, 0,60, +,+, 685512 Low_complexity Low_complexity 585 chrUn_NT_470076v1 3701 8136 GGXHOI 558 + 3701 8136 0 8 167,191,297,193,246,193,247,222, 0,594,1105,1798,2313,3005,3520,4213, +,+,+,+,+,+,+,+, 685523 Satellite W-chromosome 585 chrUn_NT_470076v1 8518 9130 GGXHOI 568 + 8518 9130 0 2 337,21, 0,591, +,+, 685532 Satellite W-chromosome 585 chrUn_NT_470077v1 286 2625 GGERVL-B-int 720 - 286 2625 0 2 1863,475, 0,1864, -,-, 685535 LTR ERVL 585 chrUn_NT_470079v1 8304 9179 GGXHOI 387 + 8304 9179 0 3 287,247,273, 0,313,602, +,+,+, 685569 Satellite W-chromosome 585 chrUn_NT_470081v1 2251 3504 (CCCTAA)n 600 + 2251 3504 0 3 678,178,361, 0,699,892, +,+,+, 685581 Simple_repeat Simple_repeat 585 chrUn_NT_470081v1 3796 9152 GGXHOI 429 + 3796 9152 0 2 1083,4259, 0,1097, +,+, 685583 Satellite W-chromosome 585 chrUn_NT_470085v1 1425 8567 GGXHOI 549 + 1425 8567 0 6 69,333,276,101,374,174, 0,2201,5076,5394,6031,6968, +,+,+,+,+,+, 685594 Satellite W-chromosome 585 chrUn_NT_470087v1 1520 2143 CR1-H 388 - 1520 2143 0 2 379,208, 0,415, -,-, 685603 LINE CR1 585 chrUn_NT_470087v1 4023 4646 CR1-H 388 - 4023 4646 0 2 379,208, 0,415, -,-, 685606 LINE CR1 585 chrUn_NT_470087v1 6527 8967 CR1-H 453 - 6527 8967 0 3 377,209,87, 0,413,2353, -,-,-, 685609 LINE CR1 585 chrUn_NT_470088v1 3764 5120 CR1-H 672 + 3764 5120 0 2 1243,113, 0,1243, +,+, 685616 LINE CR1 585 chrUn_NT_470088v1 8428 9054 CR1-H 628 + 8428 9054 0 2 467,140, 0,486, +,+, 685619 LINE CR1 585 chrUn_NT_470090v1 1094 2508 GGXHOI 416 - 1094 2508 0 2 366,1032, 0,382, -,-, 685622 Satellite W-chromosome 585 chrUn_NT_470090v1 3924 9158 GGXHOI 411 - 3924 9158 0 5 200,150,1106,657,3056, 0,217,388,1510,2178, -,-,-,-,-, 685624 Satellite W-chromosome 585 chrUn_NT_470091v1 195 6877 GGXHOI 380 + 195 6877 0 5 1080,2301,392,1576,1259, 0,1098,3420,3829,5423, +,+,+,+,+, 685626 Satellite W-chromosome 585 chrUn_NT_470093v1 2437 3659 GGXHOI 590 + 2437 3659 0 4 275,146,125,19, 0,572,764,1203, +,+,+,+, 685643 Satellite W-chromosome 585 chrUn_NT_470093v1 3737 4959 GGXHOI 590 + 3737 4959 0 3 720,125,19, 0,766,1203, +,+,+, 685646 Satellite W-chromosome 585 chrUn_NT_470093v1 5034 7161 GGXHOI 587 + 5034 7161 0 5 456,71,468,317,17, 0,469,812,1471,2110, +,+,+,+,+, 685648 Satellite W-chromosome 585 chrUn_NT_470095v1 5044 5396 (CTCTATGGGG)n 454 + 5044 5396 0 2 32,115, 0,237, +,+, 685668 Satellite Satellite 585 chrUn_NT_470095v1 6235 6749 (ACCCCATAGGG)n 480 - 6235 6749 0 2 119,50, 0,464, -,-, 685676 Satellite Satellite 585 chrUn_NT_470095v1 6544 6898 (CTCTATGGGG)n 450 - 6544 6898 0 2 171,71, 0,283, -,-, 685679 Satellite Satellite 585 chrUn_NT_470095v1 7261 7537 (ACCCATAGAG)n 348 - 7261 7537 0 2 124,117, 0,159, -,-, 685684 Satellite Satellite 585 chrUn_NT_470096v1 4578 9156 GGXHOI 536 + 4578 9156 0 4 299,661,391,1992, 0,763,1638,2586, +,+,+,+, 685690 Satellite W-chromosome 585 chrUn_NT_470097v1 956 1530 (CCCTAA)n 679 + 956 1530 0 3 177,176,177, 0,194,397, +,+,+, 685697 Simple_repeat Simple_repeat 585 chrUn_NT_470098v1 2290 3904 Sat-CR1_GG 182 - 2290 3904 0 2 1319,135, 0,1479, -,-, 685713 Satellite Satellite 585 chrUn_NT_470098v1 3815 6249 GGXHOI 552 - 3815 6249 0 3 385,116,771, 0,1136,1663, -,-,-, 685715 Satellite W-chromosome 585 chrUn_NT_470101v1 2822 3384 CR1-X 414 - 2822 3384 0 3 220,132,168, 0,262,394, -,-,-, 685737 LINE CR1 585 chrUn_NT_470102v1 2165 3016 (CGAGG)n 493 + 2165 3016 0 2 309,526, 0,325, +,+, 685753 Simple_repeat Simple_repeat 585 chrUn_NT_470102v1 3146 3705 (CGAGG)n 470 + 3146 3705 0 2 238,309, 0,250, +,+, 685754 Simple_repeat Simple_repeat 585 chrUn_NT_470102v1 4838 6057 (CGAGG)n 532 + 4838 6057 0 5 475,181,143,181,174, 0,486,688,842,1045, +,+,+,+,+, 685762 Simple_repeat Simple_repeat 585 chrUn_NT_470102v1 6195 7553 (CGAGG)n 517 + 6195 7553 0 3 373,178,748, 0,432,610, +,+,+, 685764 Simple_repeat Simple_repeat 585 chrUn_NT_470102v1 7883 8849 (CGAGG)n 498 + 7883 8849 0 2 287,498, 0,468, +,+, 685767 Simple_repeat Simple_repeat 585 chrUn_NT_470105v1 943 4367 GGXHOI 522 - 943 4367 0 6 24,214,294,192,247,691, 0,305,916,1533,2165,2733, -,-,-,-,-,-, 685782 Satellite W-chromosome 585 chrUn_NT_470105v1 4434 6785 GGXHOI 562 - 4434 6785 0 5 17,194,297,194,209, 0,341,932,1551,2142, -,-,-,-,-, 685788 Satellite W-chromosome 585 chrUn_NT_470105v1 7193 7903 GGXHOI 502 - 7193 7903 0 2 225,213, 0,497, -,-, 685794 Satellite W-chromosome 585 chrUn_NT_470105v1 7973 9098 GGXHOI 540 - 7973 9098 0 3 26,191,285, 0,333,840, -,-,-, 685796 Satellite W-chromosome 585 chrUn_NT_470108v1 3081 6156 GGLTR7-int 410 - 3081 6156 0 4 277,946,1618,115, 0,324,1342,2960, -,-,-,-, 685810 LTR ERV1 585 chrUn_NT_470109v1 3565 4159 (CTCTATGGGG)n 556 + 3565 4159 0 3 162,240,121, 0,177,473, +,+,+, 685819 Satellite Satellite 585 chrUn_NT_470109v1 5799 6185 (ACCCATAGAG)n 499 - 5799 6185 0 2 126,238, 0,148, -,-, 685823 Satellite Satellite 585 chrUn_NT_470109v1 6762 7372 (ACCCATAGAG)n 551 - 6762 7372 0 3 246,121,157, 0,270,453, -,-,-, 685826 Satellite Satellite 585 chrUn_NT_470109v1 7506 7915 (ACCCATAGAG)n 529 - 7506 7915 0 3 115,112,150, 0,135,259, -,-,-, 685827 Satellite Satellite 585 chrUn_NT_470109v1 8049 8678 (ACCCATAGAG)n 557 - 8049 8678 0 3 370,87,30, 0,384,599, -,-,-, 685828 Satellite Satellite 585 chrUn_NT_470110v1 5425 5990 CR1-X 437 - 5425 5990 0 3 220,137,168, 0,260,397, -,-,-, 685835 LINE CR1 585 chrUn_NT_470111v1 2738 2978 (GGTCTATAG)n 658 + 2738 2978 0 2 82,106, 0,134, +,+, 685846 Simple_repeat Simple_repeat 585 chrUn_NT_470111v1 7129 7456 (ACCCCATAGGG)n 500 - 7129 7456 0 2 161,166, 0,161, -,-, 685854 Satellite Satellite 585 chrUn_NT_470112v1 1785 9115 GGXHOI 406 - 1785 9115 0 6 885,1547,183,675,620,3294, 0,901,2463,2671,3365,4036, -,-,-,-,-,-, 685858 Satellite W-chromosome 585 chrUn_NT_470113v1 73 609 (CCTCG)n 478 + 73 609 0 2 185,288, 0,248, +,+, 685860 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 1562 2082 (CCTCG)n 564 + 1562 2082 0 2 251,83, 0,437, +,+, 685868 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 2120 2948 (CCTCG)n 522 + 2120 2948 0 3 173,363,186, 0,236,642, +,+,+, 685871 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 3654 4169 (CCTCG)n 467 + 3654 4169 0 2 292,216, 0,299, +,+, 685876 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 4243 4673 (CCTCG)n 496 + 4243 4673 0 2 175,234, 0,196, +,+, 685878 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 5399 6067 (CCTCG)n 602 + 5399 6067 0 2 237,250, 0,418, +,+, 685883 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 6116 6860 (CCTCG)n 539 + 6116 6860 0 2 369,361, 0,383, +,+, 685886 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 6889 7556 (CCTCG)n 561 + 6889 7556 0 3 178,231,203, 0,195,464, +,+,+, 685888 Simple_repeat Simple_repeat 585 chrUn_NT_470113v1 7917 8591 (CCTCG)n 490 + 7917 8591 0 2 376,298, 0,376, +,+, 685892 Simple_repeat Simple_repeat 585 chrUn_NT_470114v1 760 8187 GGXHOI 380 - 760 8187 0 9 261,1126,175,1754,137,1894,783,247,896, 0,276,1418,1616,3389,3544,5456,6267,6531, -,-,-,-,-,-,-,-,-, 685897 Satellite W-chromosome 585 chrUn_NT_470114v1 8330 9128 GGXHOI 317 - 8330 9128 0 3 125,424,180, 0,147,618, -,-,-, 685898 Satellite W-chromosome 585 chrUn_NT_470116v1 1348 3585 GGXHOI 436 - 1348 3585 0 2 132,2077, 0,160, -,-, 685907 Satellite W-chromosome 585 chrUn_NT_470116v1 3719 5247 GGXHOI 392 - 3719 5247 0 2 144,1357, 0,171, -,-, 685908 Satellite W-chromosome 585 chrUn_NT_470117v1 942 2209 CR1-H 562 - 942 2209 0 2 113,1154, 0,113, -,-, 685919 LINE CR1 585 chrUn_NT_470119v1 740 3388 GGXHOI 397 + 740 3388 0 3 1044,965,599, 0,1064,2049, +,+,+, 685971 Satellite W-chromosome 585 chrUn_NT_470119v1 3965 7735 GGXHOI 366 + 3965 7735 0 6 186,431,978,979,968,133, 0,201,652,1650,2649,3637, +,+,+,+,+,+, 685973 Satellite W-chromosome 585 chrUn_NT_470119v1 8386 9094 GGXHOI 367 + 8386 9094 0 2 421,266, 0,442, +,+, 685975 Satellite W-chromosome 585 chrUn_NT_470123v1 686 9126 GGXHOI 425 - 686 9126 0 12 146,843,437,1011,928,64,1065,960,97,1389,1048,216, 0,161,1032,1489,2548,3495,3574,4655,5635,5754,7163,8224, -,-,-,-,-,-,-,-,-,-,-,-, 685995 Satellite W-chromosome 585 chrUn_NT_470127v1 2919 6724 GGXHOI 384 - 2919 6724 0 2 1255,2532, 0,1273, -,-, 686007 Satellite W-chromosome 585 chrUn_NT_470127v1 6815 8288 GGXHOI 342 - 6815 8288 0 3 1015,256,144, 0,1058,1329, -,-,-, 686008 Satellite W-chromosome 585 chrUn_NT_470129v1 624 929 (ACCCATTGGG)n 454 - 624 929 0 2 141,162, 0,143, -,-, 686018 Satellite Satellite 585 chrUn_NT_470129v1 2463 3167 (ATGGTG)n 496 + 2463 3167 0 2 450,74, 0,630, +,+, 686024 Simple_repeat Simple_repeat 585 chrUn_NT_470129v1 3759 4118 (ATGGTG)n 526 + 3759 4118 0 2 147,32, 0,327, +,+, 686029 Simple_repeat Simple_repeat 585 chrUn_NT_470130v1 1269 5844 GGXHOI 446 + 1269 5844 0 5 521,1197,1007,1177,592, 0,538,1760,2791,3983, +,+,+,+,+, 686041 Satellite W-chromosome 585 chrUn_NT_470130v1 5928 9042 GGXHOI 394 + 5928 9042 0 4 181,993,604,1266, 0,205,1233,1848, +,+,+,+, 686042 Satellite W-chromosome 585 chrUn_NT_470131v1 1248 1792 GGERVL-A-int 593 + 1248 1792 0 2 260,261, 0,283, +,+, 686044 LTR ERVL 585 chrUn_NT_470133v1 516 1296 (ACCCATAGAG)n 737 + 516 1296 0 3 257,194,202, 0,257,578, +,+,+, 686057 Satellite Satellite 585 chrUn_NT_470133v1 1624 2283 (GCCCCACAGCT)n 436 - 1624 2283 0 3 246,124,248, 0,266,411, -,-,-, 686060 Satellite Satellite 585 chrUn_NT_470133v1 2202 2443 (CTCTATGGGG)n 512 + 2202 2443 0 2 101,20, 0,221, +,+, 686061 Satellite Satellite 585 chrUn_NT_470133v1 2303 2568 (GCCCCACAGCT)n 455 - 2303 2568 0 2 120,145, 0,120, -,-, 686062 Satellite Satellite 585 chrUn_NT_470133v1 2664 3095 (GCCCCACAGCT)n 443 - 2664 3095 0 3 132,131,125, 0,144,306, -,-,-, 686063 Satellite Satellite 585 chrUn_NT_470133v1 8218 8836 (CTCTATGGGG)n 809 - 8218 8836 0 3 129,89,238, 0,239,380, -,-,-, 686068 Satellite Satellite 585 chrUn_NT_470134v1 180 7230 GGXHOI 567 - 180 7230 0 6 69,285,371,355,207,122, 0,113,1853,3685,4574,6928, -,-,-,-,-,-, 686074 Satellite W-chromosome 585 chrUn_NT_470138v1 1557 2606 GGXHOI 390 + 1557 2606 0 2 472,514, 0,535, +,+, 686110 Satellite W-chromosome 585 chrUn_NT_470138v1 2705 4248 GGXHOI 386 + 2705 4248 0 2 472,1008, 0,535, +,+, 686111 Satellite W-chromosome 585 chrUn_NT_470138v1 5001 6052 GGXHOI 392 + 5001 6052 0 2 472,516, 0,535, +,+, 686113 Satellite W-chromosome 585 chrUn_NT_470138v1 6151 7200 GGXHOI 391 + 6151 7200 0 2 472,514, 0,535, +,+, 686114 Satellite W-chromosome 585 chrUn_NT_470139v1 2966 3806 GGXHOI 574 - 2966 3806 0 2 36,19, 0,821, -,-, 686121 Satellite W-chromosome 585 chrUn_NT_470139v1 4656 7066 GGXHOI 572 - 4656 7066 0 2 156,572, 0,1838, -,-, 686125 Satellite W-chromosome 585 chrUn_NT_470139v1 7096 9097 GGXHOI 523 - 7096 9097 0 3 148,400,875, 0,186,1126, -,-,-, 686128 Satellite W-chromosome 585 chrUn_NT_470140v1 2773 5582 GGXHOI 374 - 2773 5582 0 5 420,743,612,352,578, 0,463,1229,1863,2231, -,-,-,-,-, 686133 Satellite W-chromosome 585 chrUn_NT_470140v1 7488 8825 GGXHOI 378 - 7488 8825 0 2 1141,181, 0,1156, -,-, 686137 Satellite W-chromosome 585 chrUn_NT_470141v1 8287 9072 GGXHOI 359 + 8287 9072 0 2 576,163, 0,622, +,+, 686140 Satellite W-chromosome 585 chrUn_NT_470142v1 315 1220 (CGAGG)n 579 + 315 1220 0 2 709,180, 0,725, +,+, 686142 Simple_repeat Simple_repeat 585 chrUn_NT_470142v1 1562 2132 (CGAGG)n 540 + 1562 2132 0 2 196,189, 0,381, +,+, 686146 Simple_repeat Simple_repeat 585 chrUn_NT_470142v1 2282 2841 (CGAGG)n 540 + 2282 2841 0 2 372,176, 0,383, +,+, 686150 Simple_repeat Simple_repeat 585 chrUn_NT_470142v1 2911 6803 (CGAGG)n 570 + 2911 6803 0 11 207,80,355,45,184,210,436,369,145,374,349, 0,544,804,1339,1408,1592,1984,2436,2830,3153,3543, +,+,+,+,+,+,+,+,+,+,+, 686151 Simple_repeat Simple_repeat 585 chrUn_NT_470142v1 8564 8688 (TCCCACC)n 244 + 8564 8688 0 2 34,34, 0,90, +,+, 686161 Simple_repeat Simple_repeat 585 chrUn_NT_470143v1 5872 6076 A-rich 393 + 5872 6076 0 2 39,134, 0,70, +,+, 686165 Low_complexity Low_complexity 585 chrUn_NT_470144v1 4444 5827 (CTCTATGGGG)n 700 + 4444 5827 0 6 60,236,27,117,118,462, 0,176,531,609,767,921, +,+,+,+,+,+, 686175 Satellite Satellite 585 chrUn_NT_470144v1 5890 6338 (CTCTATGGGG)n 698 + 5890 6338 0 2 142,12, 0,436, +,+, 686179 Satellite Satellite 585 chrUn_NT_470145v1 3106 3646 GGXHOI 432 - 3106 3646 0 2 251,277, 0,263, -,-, 686193 Satellite W-chromosome 585 chrUn_NT_470145v1 4527 5149 GGXHOI 544 - 4527 5149 0 2 26,211, 0,411, -,-, 686196 Satellite W-chromosome 585 chrUn_NT_470145v1 5524 6349 GGXHOI 508 - 5524 6349 0 2 387,213, 0,612, -,-, 686200 Satellite W-chromosome 585 chrUn_NT_470145v1 6457 7419 GGXHOI 380 - 6457 7419 0 2 479,464, 0,498, -,-, 686202 Satellite W-chromosome 585 chrUn_NT_470145v1 7496 9074 GGXHOI 493 - 7496 9074 0 4 58,885,20,192, 0,263,1344,1386, -,-,-,-, 686203 Satellite W-chromosome 585 chrUn_NT_470146v1 2979 7234 GGXHOI 425 - 2979 7234 0 9 146,813,187,640,582,276,674,512,217, 0,164,992,1214,1903,2500,2819,3508,4038, -,-,-,-,-,-,-,-,-, 686209 Satellite W-chromosome 585 chrUn_NT_470146v1 7358 9051 GGXHOI 390 - 7358 9051 0 6 206,742,139,148,161,137, 0,263,1061,1217,1380,1556, -,-,-,-,-,-, 686210 Satellite W-chromosome 585 chrUn_NT_470147v1 1692 2463 GGXHOI 295 - 1692 2463 0 3 308,147,267, 0,321,504, -,-,-, 686212 Satellite W-chromosome 585 chrUn_NT_470147v1 2615 5104 GGXHOI 434 - 2615 5104 0 5 1337,176,435,224,165, 0,1376,1593,2079,2324, -,-,-,-,-, 686213 Satellite W-chromosome 585 chrUn_NT_470147v1 5526 5836 GGXHOI 360 - 5526 5836 0 2 129,141, 0,169, -,-, 686215 Satellite W-chromosome 585 chrUn_NT_470147v1 6450 8058 GGXHOI 396 - 6450 8058 0 3 984,207,362, 0,1023,1246, -,-,-, 686217 Satellite W-chromosome 585 chrUn_NT_470147v1 8658 9037 GGXHOI 325 - 8658 9037 0 2 188,174, 0,205, -,-, 686219 Satellite W-chromosome 585 chrUn_NT_470149v1 2509 5153 GGXHOI 410 - 2509 5153 0 2 2478,142, 0,2502, -,-, 686225 Satellite W-chromosome 585 chrUn_NT_470149v1 5217 9077 GGXHOI 363 - 5217 9077 0 5 551,785,443,1000,993, 0,597,1394,1853,2867, -,-,-,-,-, 686226 Satellite W-chromosome 585 chrUn_NT_470150v1 1556 3669 GGXHOI 404 - 1556 3669 0 2 858,1208, 0,905, -,-, 686230 Satellite W-chromosome 585 chrUn_NT_470150v1 3698 5595 GGXHOI 387 - 3698 5595 0 3 1327,235,230, 0,1369,1667, -,-,-, 686232 Satellite W-chromosome 585 chrUn_NT_470150v1 6003 9082 GGXHOI 397 - 6003 9082 0 4 699,442,557,1300, 0,746,1205,1779, -,-,-,-, 686236 Satellite W-chromosome 585 chrUn_NT_470153v1 1081 1592 CR1-D2 595 - 1081 1592 0 2 72,306, 0,205, -,-, 686257 LINE CR1 585 chrUn_NT_470155v1 194 2584 GGLTR7-int 476 - 194 2584 0 2 719,342, 0,2048, -,-, 686280 LTR ERV1 585 chrUn_NT_470155v1 6760 7383 G-rich 424 + 6760 7383 0 2 35,530, 0,93, +,+, 686287 Low_complexity Low_complexity 585 chrUn_NT_470157v1 814 1397 (CGAGG)n 501 + 814 1397 0 3 180,172,174, 0,225,409, +,+,+, 686303 Simple_repeat Simple_repeat 585 chrUn_NT_470157v1 2191 2932 (CGAGG)n 494 + 2191 2932 0 2 121,443, 0,298, +,+, 686305 Simple_repeat Simple_repeat 585 chrUn_NT_470157v1 3601 4819 (CGAGG)n 509 + 3601 4819 0 2 820,367, 0,851, +,+, 686311 Simple_repeat Simple_repeat 585 chrUn_NT_470157v1 6177 8896 (CGAGG)n 524 + 6177 8896 0 7 594,766,191,68,176,435,181, 0,637,1446,1774,1878,2088,2538, +,+,+,+,+,+,+, 686315 Simple_repeat Simple_repeat 585 chrUn_NT_470158v1 4240 4757 (CAGA)n 571 + 4240 4757 0 2 238,274, 0,243, +,+, 686325 Simple_repeat Simple_repeat 585 chrUn_NT_470159v1 1231 1918 (CAAGG)n 530 + 1231 1918 0 3 130,125,42, 0,303,645, +,+,+, 686330 Simple_repeat Simple_repeat 585 chrUn_NT_470159v1 2359 3350 (CCTTG)n 502 + 2359 3350 0 2 377,586, 0,405, +,+, 686336 Simple_repeat Simple_repeat 585 chrUn_NT_470159v1 4153 4803 (CAAGG)n 532 + 4153 4803 0 2 374,259, 0,391, +,+, 686341 Simple_repeat Simple_repeat 585 chrUn_NT_470159v1 4891 5151 (CCTTG)n 498 + 4891 5151 0 2 178,24, 0,236, +,+, 686342 Simple_repeat Simple_repeat 585 chrUn_NT_470159v1 5204 5850 (CCTTG)n 497 + 5204 5850 0 3 156,135,54, 0,175,592, +,+,+, 686344 Simple_repeat Simple_repeat 585 chrUn_NT_470161v1 8163 8813 CR1-Y2_Aves 380 - 8163 8813 0 3 99,319,172, 0,116,478, -,-,-, 686377 LINE CR1 585 chrUn_NT_470162v1 1444 7616 GGXHOI 368 - 1444 7616 0 5 2297,2323,708,150,561, 0,2318,4690,5447,5611, -,-,-,-,-, 686380 Satellite W-chromosome 585 chrUn_NT_470162v1 8254 9076 GGXHOI 378 - 8254 9076 0 3 166,127,464, 0,214,358, -,-,-, 686382 Satellite W-chromosome 585 chrUn_NT_470165v1 2946 8382 GGXHOI 400 + 2946 8382 0 5 1024,708,1519,1180,936, 0,1040,1765,3303,4500, +,+,+,+,+, 686392 Satellite W-chromosome 585 chrUn_NT_470165v1 8497 9044 GGXHOI 429 + 8497 9044 0 2 419,113, 0,434, +,+, 686393 Satellite W-chromosome 585 chrUn_NT_470167v1 866 1862 GGXHOI 394 - 866 1862 0 2 647,334, 0,662, -,-, 686397 Satellite W-chromosome 585 chrUn_NT_470167v1 1946 2941 GGXHOI 419 - 1946 2941 0 3 487,146,338, 0,500,657, -,-,-, 686398 Satellite W-chromosome 585 chrUn_NT_470167v1 3026 6167 GGXHOI 424 - 3026 6167 0 6 487,146,910,146,1056,333, 0,500,657,1580,1737,2808, -,-,-,-,-,-, 686399 Satellite W-chromosome 585 chrUn_NT_470167v1 6252 7247 GGXHOI 415 - 6252 7247 0 3 564,148,249, 0,583,746, -,-,-, 686400 Satellite W-chromosome 585 chrUn_NT_470167v1 7332 8326 GGXHOI 392 - 7332 8326 0 2 647,332, 0,662, -,-, 686401 Satellite W-chromosome 585 chrUn_NT_470168v1 4929 9072 Z-REP 856 - 4929 9072 0 2 3288,782, 0,3361, -,-, 686408 Satellite macro 585 chrUn_NT_470169v1 2651 2801 GGERVL-C-int 453 - 2651 2801 0 2 84,66, 0,84, -,-, 686410 LTR ERVL 585 chrUn_NT_470169v1 4125 5284 CR1-X 441 - 4125 5284 0 3 78,171,110, 0,78,1049, -,-,-, 686412 LINE CR1 585 chrUn_NT_470170v1 3906 8872 GGXHOI 386 - 3906 8872 0 5 154,596,1696,1243,1155, 0,186,820,2531,3811, -,-,-,-,-, 686415 Satellite W-chromosome 585 chrUn_NT_470171v1 2030 2233 (CTCTATGGGG)n 648 + 2030 2233 0 2 52,32, 0,171, +,+, 686419 Satellite Satellite 585 chrUn_NT_470171v1 2217 2730 (ACCCATAGAG)n 620 - 2217 2730 0 2 239,270, 0,243, -,-, 686421 Satellite Satellite 585 chrUn_NT_470171v1 2915 3720 (ACCCATAGAG)n 679 - 2915 3720 0 5 151,132,119,86,31, 0,151,306,445,774, -,-,-,-,-, 686423 Satellite Satellite 585 chrUn_NT_470171v1 3903 4547 (ACCCATAGAG)n 637 - 3903 4547 0 3 183,161,42, 0,195,602, -,-,-, 686426 Satellite Satellite 585 chrUn_NT_470171v1 4259 4505 (CTCTATGGGG)n 578 + 4259 4505 0 2 95,29, 0,217, +,+, 686427 Satellite Satellite 585 chrUn_NT_470171v1 4816 5446 (ACCCATAGAG)n 668 - 4816 5446 0 2 266,364, 0,266, -,-, 686430 Satellite Satellite 585 chrUn_NT_470171v1 5845 6206 (ACCCATAGAG)n 616 - 5845 6206 0 2 123,186, 0,175, -,-, 686434 Satellite Satellite 585 chrUn_NT_470171v1 6598 7042 (ACCCATAGAG)n 696 - 6598 7042 0 2 120,322, 0,122, -,-, 686436 Satellite Satellite 585 chrUn_NT_470171v1 7033 7313 (ACCCATAGAG)n 586 + 7033 7313 0 2 122,31, 0,249, +,+, 686437 Satellite Satellite 585 chrUn_NT_470172v1 1747 2993 (TTAGGG)n 609 + 1747 2993 0 5 178,255,225,240,124, 0,178,433,688,1122, +,+,+,+,+, 686453 Simple_repeat Simple_repeat 585 chrUn_NT_470172v1 3330 4271 (TTAGGG)n 651 + 3330 4271 0 3 339,168,242, 0,531,699, +,+,+, 686458 Simple_repeat Simple_repeat 585 chrUn_NT_470172v1 4278 5304 (CCCTAA)n 570 + 4278 5304 0 2 795,213, 0,813, +,+, 686460 Simple_repeat Simple_repeat 585 chrUn_NT_470172v1 5327 6999 (CCCTAA)n 640 + 5327 6999 0 6 396,178,228,58,9,184, 0,430,658,1186,1453,1488, +,+,+,+,+,+, 686462 Simple_repeat Simple_repeat 585 chrUn_NT_470172v1 6571 6780 (CCTAA)n 524 + 6571 6780 0 2 6,26, 0,183, +,+, 686465 Simple_repeat Simple_repeat 585 chrUn_NT_470172v1 7829 8717 GGXHOI 258 + 7829 8717 0 3 331,340,157, 0,376,731, +,+,+, 686471 Satellite W-chromosome 585 chrUn_NT_470174v1 4847 9003 CR1-F2 698 + 4847 9003 0 3 705,98,116, 0,3935,4040, +,+,+, 686483 LINE CR1 585 chrUn_NT_470175v1 2502 3139 GGXHOI 278 - 2502 3139 0 2 147,464, 0,173, -,-, 686491 Satellite W-chromosome 585 chrUn_NT_470175v1 5079 6492 GGXHOI 327 - 5079 6492 0 2 813,552, 0,861, -,-, 686493 Satellite W-chromosome 585 chrUn_NT_470175v1 6828 8120 GGXHOI 349 - 6828 8120 0 4 107,317,581,238, 0,124,456,1054, -,-,-,-, 686494 Satellite W-chromosome 585 chrUn_NT_470175v1 8317 8744 GGXHOI 399 - 8317 8744 0 2 262,145, 0,282, -,-, 686495 Satellite W-chromosome 585 chrUn_NT_470176v1 2528 2617 A-rich 292 + 2528 2617 0 2 21,33, 0,56, +,+, 686501 Low_complexity Low_complexity 585 chrUn_NT_470176v1 4289 4758 A-rich 590 + 4289 4758 0 2 396,38, 0,431, +,+, 686510 Low_complexity Low_complexity 585 chrUn_NT_470177v1 571 5003 GGXHOI 550 + 571 5003 0 3 800,133,304, 0,2955,4128, +,+,+, 686525 Satellite W-chromosome 585 chrUn_NT_470177v1 5070 7585 GGXHOI 534 + 5070 7585 0 4 412,13,140,567, 0,848,1186,1948, +,+,+,+, 686528 Satellite W-chromosome 585 chrUn_NT_470177v1 7708 8201 GGXHOI 557 + 7708 8201 0 2 166,310, 0,183, +,+, 686532 Satellite W-chromosome 585 chrUn_NT_470179v1 3132 4227 GGERVL-A-int 108 + 3132 4227 0 2 391,436, 0,659, +,+, 686544 LTR ERVL 585 chrUn_NT_470180v1 660 2067 GGLTR7-int 315 + 660 2067 0 3 99,257,289, 0,101,1118, +,+,+, 686550 LTR ERV1 585 chrUn_NT_470181v1 8037 9050 (CATGC)n 291 + 8037 9050 0 5 147,276,159,160,161, 0,168,460,652,852, +,+,+,+,+, 686564 Simple_repeat Simple_repeat 585 chrUn_NT_470182v1 1047 1278 CR1-X2 492 + 1047 1278 0 2 99,78, 0,153, +,+, 686567 LINE CR1 585 chrUn_NT_470184v1 2748 3787 GGXHOI 333 + 2748 3787 0 2 139,886, 0,153, +,+, 686585 Satellite W-chromosome 585 chrUn_NT_470184v1 4167 8767 GGXHOI 355 + 4167 8767 0 4 145,2230,1915,261, 0,162,2407,4339, +,+,+,+, 686586 Satellite W-chromosome 585 chrUn_NT_470185v1 7095 9054 LSU-rRNA_Hsa 766 + 7095 9054 0 4 717,296,83,776, 0,717,1056,1183, +,+,+,+, 686590 rRNA rRNA 585 chrUn_NT_470187v1 2376 3034 GGLTR11 226 - 2376 3034 0 2 147,214, 0,444, -,-, 686605 LTR ERV1 585 chrUn_NT_470188v1 5306 5768 (CCCCATTGGG)n 380 - 5306 5768 0 2 121,328, 0,134, -,-, 686610 Satellite Satellite 585 chrUn_NT_470190v1 1363 4797 GGXHOI 437 - 1363 4797 0 5 345,1930,393,227,438, 0,399,2341,2751,2996, -,-,-,-,-, 686618 Satellite W-chromosome 585 chrUn_NT_470190v1 5001 5890 GGXHOI 393 - 5001 5890 0 3 156,317,389, 0,169,500, -,-,-, 686619 Satellite W-chromosome 585 chrUn_NT_470190v1 6472 8750 GGXHOI 431 - 6472 8750 0 5 188,361,227,983,411, 0,205,584,830,1867, -,-,-,-,-, 686621 Satellite W-chromosome 585 chrUn_NT_470191v1 6879 7427 GGXHOI 553 + 6879 7427 0 3 26,17,145, 0,320,403, +,+,+, 686635 Satellite W-chromosome 585 chrUn_NT_470191v1 7538 8340 GGXHOI 496 + 7538 8340 0 2 50,543, 0,259, +,+, 686637 Satellite W-chromosome 585 chrUn_NT_470191v1 8414 9053 GGXHOI 445 + 8414 9053 0 2 188,428, 0,211, +,+, 686639 Satellite W-chromosome 585 chrUn_NT_470193v1 446 1850 GGXHOI 538 - 446 1850 0 2 531,326, 0,1078, -,-, 686650 Satellite W-chromosome 585 chrUn_NT_470193v1 2310 7828 Sat-CR1_GG 168 - 2310 7828 0 4 555,19,42,1604, 0,2453,2677,3914, -,-,-,-, 686654 Satellite Satellite 585 chrUn_NT_470193v1 6252 9053 GGXHOI 554 - 6252 9053 0 2 1634,25, 0,2776, -,-, 686658 Satellite W-chromosome 585 chrUn_NT_470195v1 3420 6818 GGXHOI 370 - 3420 6818 0 2 1284,2102, 0,1296, -,-, 686671 Satellite W-chromosome 585 chrUn_NT_470196v1 3814 4354 A-rich 582 + 3814 4354 0 2 467,38, 0,502, +,+, 686685 Low_complexity Low_complexity 585 chrUn_NT_470198v1 1546 2102 (CAAGG)n 588 + 1546 2102 0 2 200,337, 0,219, +,+, 686711 Simple_repeat Simple_repeat 585 chrUn_NT_470198v1 2493 3288 (CAGGC)n 525 + 2493 3288 0 4 157,151,14,125, 0,157,471,670, +,+,+,+, 686714 Simple_repeat Simple_repeat 585 chrUn_NT_470198v1 3549 4206 (CAAGG)n 664 + 3549 4206 0 2 116,190, 0,467, +,+, 686719 Simple_repeat Simple_repeat 585 chrUn_NT_470198v1 4255 5527 (CAAGG)n 634 + 4255 5527 0 4 416,111,22,327, 0,446,911,945, +,+,+,+, 686722 Simple_repeat Simple_repeat 585 chrUn_NT_470198v1 7649 9031 GGXHOI 391 - 7649 9031 0 3 208,418,693, 0,241,689, -,-,-, 686729 Satellite W-chromosome 585 chrUn_NT_470199v1 8274 8687 CR1-H 671 - 8274 8687 0 3 138,123,68, 0,142,345, -,-,-, 686737 LINE CR1 585 chrUn_NT_470200v1 1803 2854 GGXHOI 392 + 1803 2854 0 2 472,516, 0,535, +,+, 686739 Satellite W-chromosome 585 chrUn_NT_470200v1 2953 4573 GGXHOI 383 + 2953 4573 0 2 472,1085, 0,535, +,+, 686740 Satellite W-chromosome 585 chrUn_NT_470200v1 5607 7261 GGXHOI 379 + 5607 7261 0 2 1081,512, 0,1142, +,+, 686742 Satellite W-chromosome 585 chrUn_NT_470201v1 5419 9035 (TCTC)n 232 + 5419 9035 0 4 1560,276,119,1544, 0,1618,1917,2072, +,+,+,+, 686747 Simple_repeat Simple_repeat 585 chrUn_NT_470205v1 5401 5579 (CTCCA)n 236 + 5401 5579 0 2 49,60, 0,118, +,+, 686795 Simple_repeat Simple_repeat 585 chrUn_NT_470206v1 6844 8649 Z-REP 529 - 6844 8649 0 3 299,848,285, 0,384,1520, -,-,-, 686816 Satellite macro 585 chrUn_NT_470207v1 391 2919 CR1-F 516 + 391 2919 0 6 201,201,201,154,188,178, 0,481,971,1436,1878,2350, +,+,+,+,+,+, 686821 LINE CR1 585 chrUn_NT_470207v1 2963 3355 CR1-F 729 + 2963 3355 0 2 170,177, 0,215, +,+, 686827 LINE CR1 585 chrUn_NT_470207v1 3392 4308 CR1-F 542 + 3392 4308 0 4 201,203,204,182, 0,243,488,734, +,+,+,+, 686828 LINE CR1 585 chrUn_NT_470207v1 4352 4762 CR1-F 745 + 4352 4762 0 2 175,190, 0,220, +,+, 686829 LINE CR1 585 chrUn_NT_470207v1 4804 7363 CR1-F 535 + 4804 7363 0 7 200,203,204,203,153,201,180, 0,500,745,990,1460,1903,2379, +,+,+,+,+,+,+, 686830 LINE CR1 585 chrUn_NT_470207v1 7407 7791 CR1-F 607 + 7407 7791 0 2 154,186, 0,198, +,+, 686835 LINE CR1 585 chrUn_NT_470207v1 7831 9035 CR1-F 533 + 7831 9035 0 5 203,201,203,154,48, 0,243,486,957,1156, +,+,+,+,+, 686836 LINE CR1 585 chrUn_NT_470209v1 1316 3455 GGXHOI 341 - 1316 3455 0 4 567,371,121,966, 0,620,1009,1173, -,-,-,-, 686847 Satellite W-chromosome 585 chrUn_NT_470209v1 4108 7007 GGXHOI 358 - 4108 7007 0 4 1065,293,249,1242, 0,1080,1391,1657, -,-,-,-, 686849 Satellite W-chromosome 585 chrUn_NT_470209v1 7116 9006 GGXHOI 336 - 7116 9006 0 4 1299,221,124,137, 0,1342,1590,1753, -,-,-,-, 686850 Satellite W-chromosome 585 chrUn_NT_470210v1 5793 6109 (CAAGG)n 578 + 5793 6109 0 2 71,64, 0,252, +,+, 686857 Simple_repeat Simple_repeat 585 chrUn_NT_470210v1 6178 6601 (CAGGC)n 446 + 6178 6601 0 2 198,51, 0,372, +,+, 686860 Simple_repeat Simple_repeat 585 chrUn_NT_470211v1 1390 1834 (CCCCATTGGG)n 429 + 1390 1834 0 3 115,119,119, 0,161,325, +,+,+, 686875 Satellite Satellite 585 chrUn_NT_470211v1 4505 4638 G-rich 553 + 4505 4638 0 2 41,32, 0,101, +,+, 686880 Low_complexity Low_complexity 585 chrUn_NT_470212v1 2542 7681 GGXHOI 395 - 2542 7681 0 2 3705,1411, 0,3728, -,-, 686890 Satellite W-chromosome 585 chrUn_NT_470212v1 7910 9018 GGXHOI 379 - 7910 9018 0 3 455,393,224, 0,470,884, -,-,-, 686891 Satellite W-chromosome 585 chrUn_NT_470216v1 308 805 (CGAGG)n 540 + 308 805 0 2 279,180, 0,317, +,+, 686929 Simple_repeat Simple_repeat 585 chrUn_NT_470216v1 4251 5804 (CGAGG)n 480 + 4251 5804 0 3 854,182,459, 0,900,1094, +,+,+, 686944 Simple_repeat Simple_repeat 585 chrUn_NT_470216v1 7581 8078 (CGAGG)n 505 + 7581 8078 0 3 102,171,190, 0,115,307, +,+,+, 686953 Simple_repeat Simple_repeat 585 chrUn_NT_470217v1 5717 9027 GGXHOI 363 - 5717 9027 0 4 276,423,1469,1030, 0,294,771,2280, -,-,-,-, 686965 Satellite W-chromosome 585 chrUn_NT_470219v1 867 1210 (ACCCCATAGGG)n 253 - 867 1210 0 2 156,152, 0,191, -,-, 686970 Satellite Satellite 585 chrUn_NT_470219v1 6109 6637 (ACCCCATAGGG)n 271 - 6109 6637 0 3 164,167,156, 0,185,372, -,-,-, 686981 Satellite Satellite 585 chrUn_NT_470219v1 7359 7733 (ACCCCATAGGG)n 314 - 7359 7733 0 2 165,157, 0,217, -,-, 686983 Satellite Satellite 585 chrUn_NT_470219v1 8049 8996 (ACCCCATAGGG)n 262 - 8049 8996 0 5 154,162,152,175,143, 0,208,421,607,804, -,-,-,-,-, 686985 Satellite Satellite 585 chrUn_NT_470220v1 262 649 (CAGGC)n 536 + 262 649 0 2 152,35, 0,352, +,+, 686987 Simple_repeat Simple_repeat 585 chrUn_NT_470220v1 896 2732 (CAAGG)n 565 + 896 2732 0 4 555,115,64,575, 0,581,1197,1261, +,+,+,+, 686991 Simple_repeat Simple_repeat 585 chrUn_NT_470220v1 2783 4742 (CAAGG)n 576 + 2783 4742 0 8 116,44,29,194,488,114,175,47, 0,296,521,585,797,1445,1559,1912, +,+,+,+,+,+,+,+, 686995 Simple_repeat Simple_repeat 585 chrUn_NT_470220v1 5466 6093 (CAGGC)n 416 + 5466 6093 0 2 297,136, 0,491, +,+, 687006 Simple_repeat Simple_repeat 585 chrUn_NT_470220v1 6223 6597 (CAGGC)n 408 + 6223 6597 0 2 131,57, 0,317, +,+, 687009 Simple_repeat Simple_repeat 585 chrUn_NT_470220v1 6629 8222 (CAAGG)n 579 + 6629 8222 0 6 281,45,390,193,197,238, 0,459,532,922,1115,1355, +,+,+,+,+,+, 687011 Simple_repeat Simple_repeat 585 chrUn_NT_470220v1 8239 8549 (CAAGG)n 574 + 8239 8549 0 2 101,33, 0,277, +,+, 687014 Simple_repeat Simple_repeat 585 chrUn_NT_470221v1 1349 1716 CR1-F 646 - 1349 1716 0 2 171,153, 0,214, -,-, 687022 LINE CR1 585 chrUn_NT_470221v1 1752 5450 CR1-F 557 - 1752 5450 0 12 191,154,204,204,155,181,199,204,203,200,189,172, 0,479,900,1146,1640,1839,2061,2302,2548,3051,3293,3526, -,-,-,-,-,-,-,-,-,-,-,-, 687023 LINE CR1 585 chrUn_NT_470221v1 5491 7734 CR1-F 576 - 5491 7734 0 8 172,178,201,204,202,200,190,178, 0,378,598,840,1086,1588,1830,2065, -,-,-,-,-,-,-,-, 687028 LINE CR1 585 chrUn_NT_470221v1 7778 8948 CR1-F 506 - 7778 8948 0 5 179,206,195,202,213, 0,221,469,706,957, -,-,-,-,-, 687030 LINE CR1 585 chrUn_NT_470222v1 2716 4340 GGXHOI 389 + 2716 4340 0 2 1046,515, 0,1109, +,+, 687034 Satellite W-chromosome 585 chrUn_NT_470222v1 4966 7156 GGXHOI 380 + 4966 7156 0 2 1043,1085, 0,1105, +,+, 687036 Satellite W-chromosome 585 chrUn_NT_470223v1 1404 4142 GGXHOI 365 - 1404 4142 0 2 412,2310, 0,428, -,-, 687040 Satellite W-chromosome 585 chrUn_NT_470223v1 4526 5999 GGXHOI 321 - 4526 5999 0 3 693,639,85, 0,705,1388, -,-,-, 687041 Satellite W-chromosome 585 chrUn_NT_470223v1 6119 9003 GGXHOI 386 - 6119 9003 0 5 338,180,373,1515,386, 0,353,549,937,2498, -,-,-,-,-, 687042 Satellite W-chromosome 585 chrUn_NT_470224v1 3257 6376 GGXHOI 540 - 3257 6376 0 5 362,240,395,84,408, 0,737,1220,1990,2711, -,-,-,-,-, 687048 Satellite W-chromosome 585 chrUn_NT_470224v1 6854 9017 GGXHOI 524 - 6854 9017 0 3 476,382,23, 0,1515,2140, -,-,-, 687056 Satellite W-chromosome 585 chrUn_NT_470226v1 374 701 (CAGGC)n 341 + 374 701 0 2 233,40, 0,287, +,+, 687069 Simple_repeat Simple_repeat 585 chrUn_NT_470226v1 1848 2806 (CAAGG)n 500 + 1848 2806 0 3 223,27,343, 0,406,615, +,+,+, 687075 Simple_repeat Simple_repeat 585 chrUn_NT_470226v1 2993 3919 (CCTTG)n 496 + 2993 3919 0 3 224,339,263, 0,282,663, +,+,+, 687080 Simple_repeat Simple_repeat 585 chrUn_NT_470226v1 4417 5520 (CAAGG)n 489 + 4417 5520 0 4 372,212,284,25, 0,372,612,1078, +,+,+,+, 687083 Simple_repeat Simple_repeat 585 chrUn_NT_470226v1 5594 6540 (CCTTG)n 514 + 5594 6540 0 3 188,482,222, 0,224,724, +,+,+, 687086 Simple_repeat Simple_repeat 585 chrUn_NT_470226v1 6564 9001 GGXHOI 321 - 6564 9001 0 4 250,320,1094,682, 0,270,644,1755, -,-,-,-, 687087 Satellite W-chromosome 585 chrUn_NT_470227v1 6434 6583 (AAAGAACGG)n 871 + 6434 6583 0 2 50,41, 0,108, +,+, 687098 Simple_repeat Simple_repeat 585 chrUn_NT_470228v1 4239 9012 GGXHOI 380 + 4239 9012 0 3 1176,2533,1004, 0,1188,3769, +,+,+, 687106 Satellite W-chromosome 585 chrUn_NT_470230v1 3049 3356 CR1-X 491 + 3049 3356 0 3 170,77,57, 0,170,250, +,+,+, 687136 LINE CR1 585 chrUn_NT_470230v1 8523 9010 CR1-B2 701 + 8523 9010 0 2 223,261, 0,226, +,+, 687139 LINE CR1 585 chrUn_NT_470233v1 572 1746 GGXHOI 377 - 572 1746 0 3 388,260,448, 0,448,726, -,-,-, 687175 Satellite W-chromosome 585 chrUn_NT_470233v1 6592 8623 GGXHOI 419 - 6592 8623 0 3 266,889,817, 0,284,1214, -,-,-, 687181 Satellite W-chromosome 585 chrUn_NT_470234v1 5122 5746 CR1-H 378 - 5122 5746 0 2 379,209, 0,415, -,-, 687190 LINE CR1 585 chrUn_NT_470234v1 7625 8247 CR1-H 381 - 7625 8247 0 2 378,209, 0,413, -,-, 687193 LINE CR1 585 chrUn_NT_470235v1 928 1963 GGXHOI 343 + 928 1963 0 3 681,143,145, 0,735,890, +,+,+, 687196 Satellite W-chromosome 585 chrUn_NT_470235v1 2045 2344 GGXHOI 365 + 2045 2344 0 2 148,134, 0,165, +,+, 687197 Satellite W-chromosome 585 chrUn_NT_470235v1 2629 5930 GGXHOI 407 + 2629 5930 0 4 232,1040,1219,755, 0,252,1307,2546, +,+,+,+, 687198 Satellite W-chromosome 585 chrUn_NT_470235v1 6061 8105 GGXHOI 373 + 6061 8105 0 3 607,1094,283, 0,651,1761, +,+,+, 687199 Satellite W-chromosome 585 chrUn_NT_470237v1 506 1501 GGXHOI 386 + 506 1501 0 2 351,615, 0,380, +,+, 687229 Satellite W-chromosome 585 chrUn_NT_470237v1 1620 2507 GGXHOI 371 + 1620 2507 0 2 734,111, 0,776, +,+, 687230 Satellite W-chromosome 585 chrUn_NT_470237v1 2601 4261 GGXHOI 363 + 2601 4261 0 4 570,222,460,361, 0,593,827,1299, +,+,+,+, 687231 Satellite W-chromosome 585 chrUn_NT_470237v1 5065 6606 GGXHOI 407 + 5065 6606 0 4 90,151,500,725, 0,118,300,816, +,+,+,+, 687233 Satellite W-chromosome 585 chrUn_NT_470237v1 6722 8041 GGXHOI 355 + 6722 8041 0 5 122,128,228,486,262, 0,141,285,526,1057, +,+,+,+,+, 687234 Satellite W-chromosome 585 chrUn_NT_470237v1 8153 8715 GGXHOI 371 + 8153 8715 0 2 171,378, 0,184, +,+, 687235 Satellite W-chromosome 585 chrUn_NT_470238v1 4148 4771 CR1-H 678 + 4148 4771 0 2 478,139, 0,484, +,+, 687239 LINE CR1 585 chrUn_NT_470239v1 2131 8170 GGXHOI 387 - 2131 8170 0 5 144,781,2330,1177,1503, 0,202,1001,3344,4536, -,-,-,-,-, 687243 Satellite W-chromosome 585 chrUn_NT_470240v1 2820 7412 GGXHOI 398 + 2820 7412 0 2 2207,2359, 0,2233, +,+, 687247 Satellite W-chromosome 585 chrUn_NT_470244v1 3332 4461 CR1-F2 887 - 3332 4461 0 2 475,654, 0,475, -,-, 687275 LINE CR1 585 chrUn_NT_470244v1 6504 7057 (CAAGG)n 468 + 6504 7057 0 2 273,95, 0,458, +,+, 687283 Simple_repeat Simple_repeat 585 chrUn_NT_470244v1 7028 7429 (CAGGC)n 494 + 7028 7429 0 2 197,184, 0,217, +,+, 687285 Simple_repeat Simple_repeat 585 chrUn_NT_470244v1 7421 7940 (CAAGG)n 530 + 7421 7940 0 2 242,98, 0,421, +,+, 687286 Simple_repeat Simple_repeat 585 chrUn_NT_470244v1 8121 8483 (CAGGC)n 510 + 8121 8483 0 2 106,79, 0,283, +,+, 687290 Simple_repeat Simple_repeat 585 chrUn_NT_470244v1 8717 8982 G-rich 455 + 8717 8982 0 2 61,164, 0,101, +,+, 687293 Low_complexity Low_complexity 585 chrUn_NT_470245v1 92 3924 CR1-F 523 - 92 3924 0 12 187,200,155,204,204,203,186,203,153,204,193,203, 0,232,722,1143,1389,1635,2004,2235,2728,3145,3396,3629, -,-,-,-,-,-,-,-,-,-,-,-, 687295 LINE CR1 585 chrUn_NT_470245v1 3967 5954 CR1-F 511 - 3967 5954 0 6 195,98,203,156,203,192, 0,268,654,902,1321,1795, -,-,-,-,-,-, 687300 LINE CR1 585 chrUn_NT_470245v1 5996 8801 CR1-F 533 - 5996 8801 0 9 216,188,156,201,203,203,199,187,177, 0,265,743,1165,1408,1653,2156,2397,2628, -,-,-,-,-,-,-,-,-, 687304 LINE CR1 585 chrUn_NT_470246v1 5518 6140 CR1-H 680 - 5518 6140 0 2 139,477, 0,145, -,-, 687316 LINE CR1 585 chrUn_NT_470248v1 827 1046 (CTCTATGGGG)n 561 + 827 1046 0 2 124,72, 0,147, +,+, 687331 Satellite Satellite 585 chrUn_NT_470248v1 1498 2017 (CTCTATGGGG)n 580 - 1498 2017 0 2 364,29, 0,490, -,-, 687334 Satellite Satellite 585 chrUn_NT_470248v1 2156 2828 (CTCTATGGGG)n 565 + 2156 2828 0 3 122,327,124, 0,176,548, +,+,+, 687337 Satellite Satellite 585 chrUn_NT_470248v1 3169 4246 (CTCTATGGGG)n 555 + 3169 4246 0 7 86,30,73,44,102,123,125, 0,211,274,470,638,775,952, +,+,+,+,+,+,+, 687338 Satellite Satellite 585 chrUn_NT_470248v1 4831 6158 (ACCCCATAGGG)n 669 - 4831 6158 0 5 541,313,24,174,129, 0,541,978,1002,1198, -,-,-,-,-, 687346 Satellite Satellite 585 chrUn_NT_470251v1 402 966 G-rich 387 + 402 966 0 2 80,457, 0,107, +,+, 687358 Low_complexity Low_complexity 585 chrUn_NT_470251v1 7244 8628 GGLTR7-int 286 - 7244 8628 0 3 289,256,98, 0,1004,1286, -,-,-, 687360 LTR ERV1 585 chrUn_NT_470252v1 1412 6494 GGXHOI 418 + 1412 6494 0 3 1334,2177,1508, 0,1371,3574, +,+,+, 687363 Satellite W-chromosome 585 chrUn_NT_470252v1 6817 8947 GGXHOI 414 + 6817 8947 0 2 315,1756, 0,374, +,+, 687364 Satellite W-chromosome 585 chrUn_NT_470254v1 3339 4461 CR1-B2 708 - 3339 4461 0 2 893,226, 0,896, -,-, 687372 LINE CR1 585 chrUn_NT_470255v1 4432 6233 GGXHOI 403 - 4432 6233 0 5 214,718,132,175,398, 0,263,1023,1210,1403, -,-,-,-,-, 687376 Satellite W-chromosome 585 chrUn_NT_470255v1 6354 8987 GGXHOI 341 - 6354 8987 0 10 440,302,128,229,130,134,324,273,365,136, 0,458,783,929,1175,1316,1470,1808,2092,2497, -,-,-,-,-,-,-,-,-,-, 687377 Satellite W-chromosome 585 chrUn_NT_470258v1 6118 7078 (ACCCCATAGGG)n 397 - 6118 7078 0 4 22,204,378,250, 0,85,307,710, -,-,-,-, 687427 Satellite Satellite 585 chrUn_NT_470259v1 728 1535 GGXHOI 390 - 728 1535 0 2 359,392, 0,415, -,-, 687434 Satellite W-chromosome 585 chrUn_NT_470259v1 3145 4657 GGXHOI 390 - 3145 4657 0 4 203,297,405,484, 0,237,590,1028, -,-,-,-, 687438 Satellite W-chromosome 585 chrUn_NT_470259v1 4756 5618 GGXHOI 378 - 4756 5618 0 2 356,446, 0,416, -,-, 687439 Satellite W-chromosome 585 chrUn_NT_470259v1 5743 6559 GGXHOI 380 - 5743 6559 0 2 507,290, 0,526, -,-, 687440 Satellite W-chromosome 585 chrUn_NT_470259v1 8260 8916 GGXHOI 341 - 8260 8916 0 2 343,293, 0,363, -,-, 687443 Satellite W-chromosome 585 chrUn_NT_470262v1 86 649 (CGAGG)n 565 + 86 649 0 2 366,197, 0,366, +,+, 687455 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 735 1694 (CGAGG)n 580 + 735 1694 0 4 286,22,84,184, 0,466,640,775, +,+,+,+, 687457 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 1759 2506 (CGAGG)n 518 + 1759 2506 0 3 103,17,259, 0,283,488, +,+,+, 687460 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 2561 3006 (CGAGG)n 510 + 2561 3006 0 2 185,242, 0,203, +,+, 687464 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 3054 5082 (CGAGG)n 564 + 3054 5082 0 8 158,26,185,232,22,321,288,190, 0,345,386,584,1001,1213,1534,1838, +,+,+,+,+,+,+,+, 687466 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 4077 4632 (CAAGG)n 459 + 4077 4632 0 2 190,365, 0,190, +,+, 687469 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 5301 5658 (CGAGG)n 518 + 5301 5658 0 2 118,60, 0,297, +,+, 687471 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 6101 7166 (CGAGG)n 485 + 6101 7166 0 4 189,182,165,441, 0,245,448,624, +,+,+,+, 687476 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 7360 8017 (CGAGG)n 523 + 7360 8017 0 4 116,174,132,191, 0,131,305,466, +,+,+,+, 687479 Simple_repeat Simple_repeat 585 chrUn_NT_470262v1 8021 8660 (CGAGG)n 580 + 8021 8660 0 2 253,366, 0,273, +,+, 687481 Simple_repeat Simple_repeat 585 chrUn_NT_470264v1 7365 8970 GGXHOI 565 + 7365 8970 0 2 1397,157, 0,1448, +,+, 687489 Satellite W-chromosome 585 chrUn_NT_470265v1 8573 8938 GGXHOI 384 + 8573 8938 0 2 155,187, 0,178, +,+, 687495 Satellite W-chromosome 585 chrUn_NT_470266v1 6797 7312 GGLTR3F1 778 + 6797 7312 0 2 401,79, 0,436, +,+, 687504 LTR ERVL 585 chrUn_NT_470267v1 2340 2884 (CGAGG)n 477 + 2340 2884 0 2 223,293, 0,251, +,+, 687519 Simple_repeat Simple_repeat 585 chrUn_NT_470267v1 4161 6624 (CGAGG)n 535 + 4161 6624 0 6 351,178,515,368,356,434, 0,371,573,1267,1654,2029, +,+,+,+,+,+, 687526 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 589 824 (CCTTG)n 508 + 589 824 0 2 170,24, 0,211, +,+, 687541 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 1186 1522 (CCTTG)n 526 + 1186 1522 0 2 112,54, 0,282, +,+, 687545 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 3008 3534 (CAAGG)n 519 + 3008 3534 0 3 174,74,89, 0,174,437, +,+,+, 687553 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 3590 4013 (CCTTG)n 474 + 3590 4013 0 2 183,224, 0,199, +,+, 687555 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 4799 5276 (CAAGG)n 464 + 4799 5276 0 2 201,250, 0,227, +,+, 687557 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 5324 6167 (CCTTG)n 517 + 5324 6167 0 3 59,403,54, 0,104,789, +,+,+, 687558 Simple_repeat Simple_repeat 585 chrUn_NT_470268v1 6693 8968 GGXHOI 372 + 6693 8968 0 2 1463,749, 0,1526, +,+, 687561 Satellite W-chromosome 585 chrUn_NT_470269v1 723 1774 GGXHOI 392 + 723 1774 0 2 472,516, 0,535, +,+, 687563 Satellite W-chromosome 585 chrUn_NT_470269v1 1873 2924 GGXHOI 392 + 1873 2924 0 2 472,516, 0,535, +,+, 687564 Satellite W-chromosome 585 chrUn_NT_470269v1 3023 4074 GGXHOI 392 + 3023 4074 0 2 472,516, 0,535, +,+, 687565 Satellite W-chromosome 585 chrUn_NT_470269v1 4173 5222 GGXHOI 390 + 4173 5222 0 2 472,514, 0,535, +,+, 687566 Satellite W-chromosome 585 chrUn_NT_470269v1 5321 6368 GGXHOI 386 + 5321 6368 0 2 470,514, 0,533, +,+, 687567 Satellite W-chromosome 585 chrUn_NT_470270v1 4881 6698 GGXHOI 376 + 4881 6698 0 2 1502,254, 0,1563, +,+, 687577 Satellite W-chromosome 585 chrUn_NT_470270v1 6780 7220 GGXHOI 389 + 6780 7220 0 2 285,136, 0,304, +,+, 687578 Satellite W-chromosome 585 chrUn_NT_470274v1 747 1066 (GCCTG)n 400 + 747 1066 0 2 98,43, 0,276, +,+, 687616 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 1089 1443 (CAGGC)n 263 + 1089 1443 0 2 246,84, 0,270, +,+, 687618 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 1443 1711 (CAAGG)n 653 + 1443 1711 0 2 46,222, 0,46, +,+, 687619 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 2235 2881 (CAAGG)n 496 + 2235 2881 0 3 229,135,156, 0,336,490, +,+,+, 687624 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 2934 3165 (CAAGG)n 464 + 2934 3165 0 2 24,183, 0,48, +,+, 687627 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 3282 3910 (CCTTG)n 528 + 3282 3910 0 2 258,353, 0,275, +,+, 687629 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 4733 5841 (CAAGG)n 489 + 4733 5841 0 4 372,214,285,25, 0,372,614,1083, +,+,+,+, 687635 Simple_repeat Simple_repeat 585 chrUn_NT_470274v1 8178 8941 GGXHOI 368 - 8178 8941 0 2 516,184, 0,579, -,-, 687643 Satellite W-chromosome 585 chrUn_NT_470276v1 3461 4017 (GGATG)n 609 + 3461 4017 0 2 351,191, 0,365, +,+, 687659 Simple_repeat Simple_repeat 585 chrUn_NT_470277v1 3134 3520 (CATCC)n 623 + 3134 3520 0 2 171,153, 0,233, +,+, 687669 Simple_repeat Simple_repeat 585 chrUn_NT_470278v1 3607 3906 GGLTR3E1 705 - 3607 3906 0 2 138,161, 0,138, -,-, 687683 LTR ERVL 585 chrUn_NT_470279v1 6989 7418 (ACCCATAGAG)n 338 - 6989 7418 0 3 113,118,108, 0,159,321, -,-,-, 687694 Satellite Satellite 585 chrUn_NT_470280v1 1076 8081 GGXHOI 378 + 1076 8081 0 8 2107,829,904,1034,142,931,769,128, 0,2123,2973,3893,4948,5110,6066,6877, +,+,+,+,+,+,+,+, 687697 Satellite W-chromosome 585 chrUn_NT_470283v1 2141 5220 CR1-C4 477 + 2141 5220 0 2 835,241, 0,2838, +,+, 687714 LINE CR1 585 chrUn_NT_470285v1 1003 1290 (CTCTATGGGG)n 692 - 1003 1290 0 2 115,119, 0,168, -,-, 687735 Satellite Satellite 585 chrUn_NT_470286v1 857 1038 (AACAACGGA)n 967 + 857 1038 0 2 51,78, 0,103, +,+, 687746 Simple_repeat Simple_repeat 585 chrUn_NT_470286v1 5052 5190 (AACGGAAAG)n 924 + 5052 5190 0 2 39,45, 0,93, +,+, 687755 Simple_repeat Simple_repeat 585 chrUn_NT_470286v1 8467 8610 (AAAGAACGG)n 952 + 8467 8610 0 2 43,41, 0,102, +,+, 687770 Simple_repeat Simple_repeat 585 chrUn_NT_470287v1 1081 1905 GGXHOI 372 - 1081 1905 0 2 663,122, 0,702, -,-, 687774 Satellite W-chromosome 585 chrUn_NT_470287v1 3706 5689 GGXHOI 308 - 3706 5689 0 6 134,279,119,595,158,537, 0,154,451,626,1270,1446, -,-,-,-,-,-, 687777 Satellite W-chromosome 585 chrUn_NT_470287v1 6022 8944 GGXHOI 393 - 6022 8944 0 3 2460,132,243, 0,2505,2679, -,-,-, 687779 Satellite W-chromosome 585 chrUn_NT_470288v1 7053 7145 A-rich 400 + 7053 7145 0 2 22,11, 0,81, +,+, 687800 Low_complexity Low_complexity 585 chrUn_NT_470289v1 2401 3662 CR1-H 512 + 2401 3662 0 2 1149,112, 0,1149, +,+, 687805 LINE CR1 585 chrUn_NT_470289v1 5920 6510 CR1-H 595 + 5920 6510 0 2 446,139, 0,451, +,+, 687809 LINE CR1 585 chrUn_NT_470290v1 2613 5192 GGXHOI 344 - 2613 5192 0 2 1391,1141, 0,1438, -,-, 687814 Satellite W-chromosome 585 chrUn_NT_470290v1 5332 8908 GGXHOI 363 - 5332 8908 0 3 510,1277,1757, 0,527,1819, -,-,-, 687815 Satellite W-chromosome 585 chrUn_NT_470293v1 462 1126 (CGAGG)n 592 + 462 1126 0 2 270,93, 0,571, +,+, 687847 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 1392 2398 (CGAGG)n 629 + 1392 2398 0 4 258,135,187,204, 0,439,600,802, +,+,+,+, 687849 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 2475 3692 (CGAGG)n 608 + 2475 3692 0 4 196,146,334,185, 0,376,539,1032, +,+,+,+, 687852 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 4121 6012 (CGAGG)n 596 + 4121 6012 0 6 187,476,24,184,105,143, 0,202,982,1023,1241,1748, +,+,+,+,+,+, 687858 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 6015 6176 (GCGAG)n 322 + 6015 6176 0 2 9,132, 0,29, +,+, 687862 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 6202 6586 (CGAGG)n 641 + 6202 6586 0 2 187,183, 0,201, +,+, 687864 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 6692 7542 (CGAGG)n 584 + 6692 7542 0 2 183,483, 0,367, +,+, 687866 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 7558 8148 (CGAGG)n 597 + 7558 8148 0 2 182,372, 0,218, +,+, 687869 Simple_repeat Simple_repeat 585 chrUn_NT_470293v1 8198 8925 (CGAGG)n 541 + 8198 8925 0 2 546,170, 0,557, +,+, 687871 Simple_repeat Simple_repeat 585 chrUn_NT_470294v1 1492 2611 CR1-B2 703 + 1492 2611 0 2 225,891, 0,228, +,+, 687873 LINE CR1 585 chrUn_NT_470294v1 7296 7844 CR1-X 425 + 7296 7844 0 3 168,118,216, 0,177,332, +,+,+, 687880 LINE CR1 585 chrUn_NT_470296v1 1718 8935 GGXHOI 556 - 1718 8935 0 10 1069,373,496,136,407,499,259,335,352,239, 0,1550,2486,3331,3510,4354,5104,5406,6028,6978, -,-,-,-,-,-,-,-,-,-, 687914 Satellite W-chromosome 585 chrUn_NT_470297v1 7725 8919 GGXHOI 380 + 7725 8919 0 2 444,732, 0,462, +,+, 687932 Satellite W-chromosome 585 chrUn_NT_470299v1 2419 7843 GGERV20_I-int 823 + 2419 7843 0 7 224,1812,80,1373,830,679,225, 0,225,2089,2216,3622,4518,5199, +,+,+,+,+,+,+, 687957 LTR ERVL 585 chrUn_NT_470299v1 7926 8931 (CCTTG)n 579 + 7926 8931 0 4 174,180,403,174, 0,187,391,831, +,+,+,+, 687959 Simple_repeat Simple_repeat 585 chrUn_NT_470300v1 2165 2221 (G)n 1000 + 2165 2221 0 2 19,18, 0,38, +,+, 687961 Simple_repeat Simple_repeat 585 chrUn_NT_470302v1 1047 1413 (CCTCG)n 481 + 1047 1413 0 2 184,164, 0,202, +,+, 687971 Simple_repeat Simple_repeat 585 chrUn_NT_470302v1 2374 3960 (CCTCG)n 484 + 2374 3960 0 2 1069,517, 0,1069, +,+, 687977 Simple_repeat Simple_repeat 585 chrUn_NT_470302v1 7059 8393 (CCTCG)n 498 + 7059 8393 0 3 188,177,914, 0,213,420, +,+,+, 687992 Simple_repeat Simple_repeat 585 chrUn_NT_470303v1 1463 2157 GGXHOI 306 + 1463 2157 0 2 185,496, 0,198, +,+, 687996 Satellite W-chromosome 585 chrUn_NT_470303v1 2250 8215 GGXHOI 391 + 2250 8215 0 6 740,498,741,3008,747,130, 0,756,1297,2054,5075,5835, +,+,+,+,+,+, 687997 Satellite W-chromosome 585 chrUn_NT_470303v1 8394 8929 GGXHOI 351 + 8394 8929 0 2 343,146, 0,389, +,+, 687998 Satellite W-chromosome 585 chrUn_NT_470306v1 3913 4248 GGXHOI 375 - 3913 4248 0 2 139,173, 0,162, -,-, 688008 Satellite W-chromosome 585 chrUn_NT_470308v1 1230 2610 GGXHOI 411 - 1230 2610 0 2 1193,176, 0,1204, -,-, 688022 Satellite W-chromosome 585 chrUn_NT_470308v1 6117 8919 GGXHOI 398 - 6117 8919 0 2 860,1913, 0,889, -,-, 688024 Satellite W-chromosome 585 chrUn_NT_470310v1 1659 3979 GGXHOI 465 + 1659 3979 0 3 1168,72,214, 0,1737,2106, +,+,+, 688032 Satellite W-chromosome 585 chrUn_NT_470310v1 5452 7860 Sat-CR1_GG 188 + 5452 7860 0 2 652,551, 0,1857, +,+, 688037 Satellite Satellite 585 chrUn_NT_470310v1 7356 8915 GGXHOI 448 + 7356 8915 0 2 720,395, 0,1164, +,+, 688039 Satellite W-chromosome 585 chrUn_NT_470311v1 1749 2637 GGXHOI 528 - 1749 2637 0 2 624,38, 0,850, -,-, 688043 Satellite W-chromosome 585 chrUn_NT_470311v1 5196 6587 GGXHOI 524 - 5196 6587 0 2 976,375, 0,1016, -,-, 688047 Satellite W-chromosome 585 chrUn_NT_470312v1 323 3709 (CAAGG)n 621 + 323 3709 0 10 224,479,144,18,31,567,119,212,230,73, 0,253,738,1237,1434,1646,2213,2512,2907,3313, +,+,+,+,+,+,+,+,+,+, 688052 Simple_repeat Simple_repeat 585 chrUn_NT_470312v1 4357 4872 (CAAGG)n 653 + 4357 4872 0 2 181,323, 0,192, +,+, 688063 Simple_repeat Simple_repeat 585 chrUn_NT_470312v1 5087 6053 (CAAGG)n 569 + 5087 6053 0 3 315,203,447, 0,315,519, +,+,+, 688067 Simple_repeat Simple_repeat 585 chrUn_NT_470312v1 5793 6345 (CAGGC)n 476 + 5793 6345 0 2 275,86, 0,466, +,+, 688068 Simple_repeat Simple_repeat 585 chrUn_NT_470312v1 6301 6939 (CAAGG)n 517 + 6301 6939 0 2 189,449, 0,189, +,+, 688070 Simple_repeat Simple_repeat 585 chrUn_NT_470312v1 6953 8129 (CAAGG)n 588 + 6953 8129 0 4 445,50,132,48, 0,773,823,1128, +,+,+,+, 688072 Simple_repeat Simple_repeat 585 chrUn_NT_470312v1 8247 8624 (CAAGG)n 633 + 8247 8624 0 2 179,198, 0,179, +,+, 688076 Simple_repeat Simple_repeat 585 chrUn_NT_470313v1 3919 4953 CR1-B2 676 + 3919 4953 0 2 226,805, 0,229, +,+, 688081 LINE CR1 585 chrUn_NT_470316v1 1037 2084 GGXHOI 461 - 1037 2084 0 4 146,141,208,207, 0,168,357,840, -,-,-,-, 688093 Satellite W-chromosome 585 chrUn_NT_470316v1 2496 3307 GGXHOI 474 - 2496 3307 0 2 136,261, 0,550, -,-, 688096 Satellite W-chromosome 585 chrUn_NT_470316v1 4221 5325 GGXHOI 528 - 4221 5325 0 3 19,219,205, 0,292,899, -,-,-, 688100 Satellite W-chromosome 585 chrUn_NT_470316v1 5403 6483 GGXHOI 514 - 5403 6483 0 2 182,197, 0,883, -,-, 688103 Satellite W-chromosome 585 chrUn_NT_470316v1 7525 8297 GGXHOI 374 - 7525 8297 0 3 423,169,149, 0,437,623, -,-,-, 688106 Satellite W-chromosome 585 chrUn_NT_470318v1 1684 1940 A-rich 365 + 1684 1940 0 2 143,69, 0,187, +,+, 688113 Low_complexity Low_complexity 585 chrUn_NT_470318v1 7396 8898 GGXHOI 498 + 7396 8898 0 2 1342,116, 0,1386, +,+, 688120 Satellite W-chromosome 585 chrUn_NT_470319v1 983 1264 (CCCCATTGGG)n 362 - 983 1264 0 2 118,131, 0,150, -,-, 688122 Satellite Satellite 585 chrUn_NT_470319v1 8282 8409 CR1-E 580 + 8282 8409 0 2 62,50, 0,77, +,+, 688140 LINE CR1 585 chrUn_NT_470320v1 1103 8907 GGXHOI 396 + 1103 8907 0 6 1613,540,1713,725,472,2646, 0,1631,2193,3922,4663,5158, +,+,+,+,+,+, 688142 Satellite W-chromosome 585 chrUn_NT_470321v1 318 1384 CR1-B2 645 - 318 1384 0 2 839,224, 0,842, -,-, 688144 LINE CR1 585 chrUn_NT_470321v1 6942 8304 CR1-X 495 - 6942 8304 0 4 50,78,171,108, 0,59,137,1254, -,-,-,-, 688148 LINE CR1 585 chrUn_NT_470322v1 4434 8833 GGXHOI 368 - 4434 8833 0 9 589,275,814,1063,416,129,149,115,585, 0,632,925,1755,2836,3300,3463,3663,3814, -,-,-,-,-,-,-,-,-, 688151 Satellite W-chromosome 585 chrUn_NT_470323v1 3613 5759 GGXHOI 430 - 3613 5759 0 4 128,251,231,1446, 0,164,432,700, -,-,-,-, 688153 Satellite W-chromosome 585 chrUn_NT_470324v1 4129 6305 GGXHOI 484 - 4129 6305 0 5 506,614,142,683,134, 0,520,1149,1340,2042, -,-,-,-,-, 688162 Satellite W-chromosome 585 chrUn_NT_470324v1 6418 8227 GGXHOI 538 - 6418 8227 0 2 1132,663, 0,1146, -,-, 688163 Satellite W-chromosome 585 chrUn_NT_470326v1 3307 4285 GGXHOI 434 - 3307 4285 0 2 822,144, 0,834, -,-, 688174 Satellite W-chromosome 585 chrUn_NT_470326v1 4655 6980 GGXHOI 363 - 4655 6980 0 3 1241,861,136, 0,1289,2189, -,-,-, 688176 Satellite W-chromosome 585 chrUn_NT_470327v1 2302 6994 GGXHOI 333 - 2302 6994 0 5 88,576,1461,2245,176, 0,134,767,2249,4516, -,-,-,-,-, 688181 Satellite W-chromosome 585 chrUn_NT_470327v1 7112 8886 GGXHOI 393 - 7112 8886 0 3 536,620,581, 0,552,1193, -,-,-, 688182 Satellite W-chromosome 585 chrUn_NT_470328v1 3747 4020 (CCCCATTGGG)n 389 - 3747 4020 0 2 105,119, 0,154, -,-, 688189 Satellite Satellite 585 chrUn_NT_470328v1 8072 8303 (CCCCATTGGG)n 391 - 8072 8303 0 2 96,117, 0,114, -,-, 688200 Satellite Satellite 585 chrUn_NT_470329v1 2095 2247 G-rich 450 + 2095 2247 0 2 60,53, 0,99, +,+, 688203 Low_complexity Low_complexity 585 chrUn_NT_470329v1 7566 8826 GGLTR7-int 332 - 7566 8826 0 2 277,211, 0,1049, -,-, 688209 LTR ERV1 585 chrUn_NT_470330v1 4503 4991 CR1-Y4 622 + 4503 4991 0 2 195,288, 0,200, +,+, 688214 LINE CR1 585 chrUn_NT_470330v1 8022 8768 CR1-F 303 - 8022 8768 0 2 579,167, 0,579, -,-, 688215 LINE CR1 585 chrUn_NT_470331v1 1699 2439 (CAAGG)n 464 + 1699 2439 0 2 131,431, 0,309, +,+, 688223 Simple_repeat Simple_repeat 585 chrUn_NT_470331v1 2059 2544 (CGAGG)n 656 + 2059 2544 0 2 117,185, 0,300, +,+, 688225 Simple_repeat Simple_repeat 585 chrUn_NT_470331v1 2499 3288 (CAAGG)n 418 + 2499 3288 0 3 121,9,141, 0,426,648, +,+,+, 688227 Simple_repeat Simple_repeat 585 chrUn_NT_470331v1 3221 3936 (CGAGG)n 522 + 3221 3936 0 2 247,288, 0,427, +,+, 688231 Simple_repeat Simple_repeat 585 chrUn_NT_470331v1 4547 4939 (CGAGG)n 621 + 4547 4939 0 2 183,185, 0,207, +,+, 688236 Simple_repeat Simple_repeat 585 chrUn_NT_470331v1 6838 7689 (CGAGG)n 540 + 6838 7689 0 3 142,305,194, 0,325,657, +,+,+, 688244 Simple_repeat Simple_repeat 585 chrUn_NT_470333v1 5458 5683 G-rich 387 + 5458 5683 0 2 49,160, 0,65, +,+, 688259 Low_complexity Low_complexity 585 chrUn_NT_470333v1 5942 6274 GA-rich 242 + 5942 6274 0 2 29,37, 0,295, +,+, 688261 Low_complexity Low_complexity 585 chrUn_NT_470333v1 7906 8181 (CCTTG)n 598 + 7906 8181 0 2 60,37, 0,238, +,+, 688266 Simple_repeat Simple_repeat 585 chrUn_NT_470334v1 6862 6995 (GCCATGTAAT)n 799 + 6862 6995 0 2 43,53, 0,80, +,+, 688286 Simple_repeat Simple_repeat 585 chrUn_NT_470334v1 7008 7485 (CAATG)n 394 + 7008 7485 0 2 256,45, 0,432, +,+, 688287 Simple_repeat Simple_repeat 585 chrUn_NT_470334v1 7661 8547 (CATGC)n 354 + 7661 8547 0 3 279,53,32, 0,624,854, +,+,+, 688290 Simple_repeat Simple_repeat 585 chrUn_NT_470334v1 7940 8285 (CGTAA)n 140 + 7940 8285 0 2 126,34, 0,311, +,+, 688291 Simple_repeat Simple_repeat 585 chrUn_NT_470335v1 2171 2627 CR1-H 677 + 2171 2627 0 2 296,160, 0,296, +,+, 688297 LINE CR1 585 chrUn_NT_470335v1 5623 6242 CR1-H 680 + 5623 6242 0 2 474,139, 0,480, +,+, 688301 LINE CR1 585 chrUn_NT_470336v1 6704 6980 (ACCCATAGGG)n 533 + 6704 6980 0 2 116,148, 0,128, +,+, 688312 Satellite Satellite 585 chrUn_NT_470336v1 6962 7246 (ACCCCATAGGG)n 389 + 6962 7246 0 2 140,122, 0,162, +,+, 688313 Satellite Satellite 585 chrUn_NT_470337v1 7041 8407 GGLTR7-int 321 - 7041 8407 0 3 272,315,89, 0,960,1277, -,-,-, 688318 LTR ERV1 585 chrUn_NT_470338v1 3693 6133 GGLTR7-int 611 + 3693 6133 0 2 334,793, 0,1647, +,+, 688323 LTR ERV1 585 chrUn_NT_470338v1 6145 8553 GGERV10_LTR 848 - 6145 8553 0 2 38,41, 0,2367, -,-, 688326 LTR ERVL 585 chrUn_NT_470338v1 6309 8511 GGLTR10D-int 925 - 6309 8511 0 2 364,1832, 0,370, -,-, 688327 LTR ERVK 585 chrUn_NT_470340v1 1340 4300 GGXHOI 385 + 1340 4300 0 3 857,836,1205, 0,903,1755, +,+,+, 688349 Satellite W-chromosome 585 chrUn_NT_470340v1 5030 7459 GGXHOI 410 + 5030 7459 0 2 185,2228, 0,201, +,+, 688351 Satellite W-chromosome 585 chrUn_NT_470344v1 1101 3946 GGERVL-B-int 711 + 1101 3946 0 2 1933,912, 0,1933, +,+, 688377 LTR ERVL 585 chrUn_NT_470344v1 4029 4249 (CTCTATGGGG)n 462 - 4029 4249 0 2 82,26, 0,194, -,-, 688378 Satellite Satellite 585 chrUn_NT_470344v1 4681 6077 GGLTR7-int 301 + 4681 6077 0 3 101,291,280, 0,127,1116, +,+,+, 688380 LTR ERV1 585 chrUn_NT_470345v1 258 3866 GGXHOI 357 - 258 3866 0 3 2086,218,1230, 0,2137,2378, -,-,-, 688382 Satellite W-chromosome 585 chrUn_NT_470345v1 3959 8847 GGXHOI 387 - 3959 8847 0 4 1301,832,1421,1226, 0,1361,2219,3662, -,-,-,-, 688383 Satellite W-chromosome 585 chrUn_NT_470346v1 7448 8093 CR1-X2 588 - 7448 8093 0 2 63,353, 0,292, -,-, 688390 LINE CR1 585 chrUn_NT_470348v1 5790 6459 CR1-B2 580 + 5790 6459 0 2 223,443, 0,226, +,+, 688405 LINE CR1 585 chrUn_NT_470349v1 3981 4389 GGXHOI 263 - 3981 4389 0 2 133,235, 0,173, -,-, 688412 Satellite W-chromosome 585 chrUn_NT_470349v1 4534 7465 GGXHOI 397 - 4534 7465 0 2 477,2434, 0,497, -,-, 688413 Satellite W-chromosome 585 chrUn_NT_470349v1 7885 8803 GGXHOI 425 - 7885 8803 0 2 754,143, 0,775, -,-, 688415 Satellite W-chromosome 585 chrUn_NT_470350v1 1012 8860 GGXHOI 398 - 1012 8860 0 4 249,1159,4012,2382, 0,263,1438,5466, -,-,-,-, 688417 Satellite W-chromosome 585 chrUn_NT_470352v1 5317 6434 CR1-F 730 + 5317 6434 0 2 343,286, 0,831, +,+, 688431 LINE CR1 585 chrUn_NT_470353v1 578 1516 GGXHOI 548 - 578 1516 0 2 475,205, 0,733, -,-, 688436 Satellite W-chromosome 585 chrUn_NT_470353v1 1605 3736 GGXHOI 502 - 1605 3736 0 3 538,835,206, 0,877,1925, -,-,-, 688438 Satellite W-chromosome 585 chrUn_NT_470353v1 3824 4770 GGXHOI 553 - 3824 4770 0 3 443,25,205, 0,456,741, -,-,-, 688441 Satellite W-chromosome 585 chrUn_NT_470353v1 4859 7047 GGXHOI 528 - 4859 7047 0 3 538,945,348, 0,878,1840, -,-,-, 688443 Satellite W-chromosome 585 chrUn_NT_470353v1 7136 8211 GGXHOI 546 - 7136 8211 0 2 533,226, 0,849, -,-, 688445 Satellite W-chromosome 585 chrUn_NT_470354v1 1086 8840 GGXHOI 353 + 1086 8840 0 5 3556,174,2162,1026,708, 0,3572,3786,5964,7046, +,+,+,+,+, 688450 Satellite W-chromosome 585 chrUn_NT_470355v1 1695 8689 GGXHOI 365 - 1695 8689 0 8 2340,876,413,262,1519,166,680,575, 0,2367,3258,3688,3966,5501,5688,6419, -,-,-,-,-,-,-,-, 688452 Satellite W-chromosome 585 chrUn_NT_470359v1 758 1597 GGXHOI 357 - 758 1597 0 2 360,459, 0,380, -,-, 688480 Satellite W-chromosome 585 chrUn_NT_470359v1 1705 2300 GGXHOI 359 - 1705 2300 0 2 289,255, 0,340, -,-, 688481 Satellite W-chromosome 585 chrUn_NT_470359v1 3110 6980 GGXHOI 389 - 3110 6980 0 3 3024,310,501, 0,3041,3369, -,-,-, 688483 Satellite W-chromosome 585 chrUn_NT_470359v1 7246 8852 GGXHOI 398 - 7246 8852 0 4 430,825,199,89, 0,441,1278,1517, -,-,-,-, 688484 Satellite W-chromosome 585 chrUn_NT_470360v1 363 1381 GGXHOI 548 - 363 1381 0 2 556,205, 0,813, -,-, 688486 Satellite W-chromosome 585 chrUn_NT_470360v1 1470 2553 GGXHOI 560 - 1470 2553 0 2 538,205, 0,878, -,-, 688488 Satellite W-chromosome 585 chrUn_NT_470360v1 2642 3725 GGXHOI 558 - 2642 3725 0 3 197,60,205, 0,478,878, -,-,-, 688490 Satellite W-chromosome 585 chrUn_NT_470360v1 3814 4922 GGXHOI 544 - 3814 4922 0 2 539,145, 0,963, -,-, 688493 Satellite W-chromosome 585 chrUn_NT_470360v1 6184 7286 GGXHOI 562 - 6184 7286 0 2 537,226, 0,876, -,-, 688496 Satellite W-chromosome 585 chrUn_NT_470360v1 7355 8841 GGXHOI 516 - 7355 8841 0 2 537,634, 0,852, -,-, 688498 Satellite W-chromosome 585 chrUn_NT_470361v1 2526 2789 (CAAGG)n 678 + 2526 2789 0 2 58,205, 0,58, +,+, 688505 Simple_repeat Simple_repeat 585 chrUn_NT_470361v1 4344 4695 (CAAGG)n 566 + 4344 4695 0 2 124,43, 0,308, +,+, 688514 Simple_repeat Simple_repeat 585 chrUn_NT_470363v1 1017 3694 GGXHOI 379 - 1017 3694 0 2 925,1736, 0,941, -,-, 688551 Satellite W-chromosome 585 chrUn_NT_470363v1 4001 8455 GGXHOI 371 - 4001 8455 0 3 1553,967,1856, 0,1611,2598, -,-,-, 688552 Satellite W-chromosome 585 chrUn_NT_470367v1 576 1685 (CAAGG)n 498 + 576 1685 0 4 372,211,281,25, 0,372,617,1084, +,+,+,+, 688589 Simple_repeat Simple_repeat 585 chrUn_NT_470367v1 1738 2098 (CCTTG)n 417 + 1738 2098 0 2 200,160, 0,200, +,+, 688591 Simple_repeat Simple_repeat 585 chrUn_NT_470367v1 2152 2764 (CCTTG)n 511 + 2152 2764 0 4 38,80,32,224, 0,67,338,388, +,+,+,+, 688593 Simple_repeat Simple_repeat 585 chrUn_NT_470367v1 3630 4277 GGXHOI 234 - 3630 4277 0 2 207,411, 0,236, -,-, 688597 Satellite W-chromosome 585 chrUn_NT_470367v1 4943 6278 GGXHOI 369 - 4943 6278 0 2 260,1019, 0,316, -,-, 688599 Satellite W-chromosome 585 chrUn_NT_470368v1 1747 2997 (TGAA)n 516 + 1747 2997 0 4 291,178,181,530, 0,303,518,720, +,+,+,+, 688616 Simple_repeat Simple_repeat 585 chrUn_NT_470368v1 3096 3652 (TGAA)n 549 + 3096 3652 0 3 175,173,185, 0,186,371, +,+,+, 688618 Simple_repeat Simple_repeat 585 chrUn_NT_470368v1 7929 8399 (ACCCCATAGGG)n 191 - 7929 8399 0 3 132,135,151, 0,157,319, -,-,-, 688622 Satellite Satellite 585 chrUn_NT_470370v1 405 898 (CCTTG)n 483 + 405 898 0 2 242,225, 0,268, +,+, 688655 Simple_repeat Simple_repeat 585 chrUn_NT_470370v1 1960 2261 (CAAGG)n 548 + 1960 2261 0 2 97,25, 0,276, +,+, 688664 Simple_repeat Simple_repeat 585 chrUn_NT_470370v1 2317 2947 (CCTTG)n 531 + 2317 2947 0 3 244,188,164, 0,267,466, +,+,+, 688666 Simple_repeat Simple_repeat 585 chrUn_NT_470370v1 3329 4006 (CAAGG)n 515 + 3329 4006 0 3 181,131,150, 0,215,527, +,+,+, 688668 Simple_repeat Simple_repeat 585 chrUn_NT_470370v1 4079 4624 (CCTTG)n 526 + 4079 4624 0 2 100,79, 0,466, +,+, 688672 Simple_repeat Simple_repeat 585 chrUn_NT_470370v1 4726 5199 (CCTTG)n 462 + 4726 5199 0 2 174,285, 0,188, +,+, 688674 Simple_repeat Simple_repeat 585 chrUn_NT_470370v1 5286 6190 (CCTTG)n 533 + 5286 6190 0 3 178,325,372, 0,193,532, +,+,+, 688676 Simple_repeat Simple_repeat 585 chrUn_NT_470371v1 1051 2001 GGXHOI 584 + 1051 2001 0 2 281,112, 0,838, +,+, 688688 Satellite W-chromosome 585 chrUn_NT_470371v1 2075 3139 GGXHOI 554 + 2075 3139 0 2 645,184, 0,880, +,+, 688690 Satellite W-chromosome 585 chrUn_NT_470371v1 3267 4242 GGXHOI 543 + 3267 4242 0 2 421,508, 0,467, +,+, 688692 Satellite W-chromosome 585 chrUn_NT_470371v1 4316 5746 GGXHOI 520 + 4316 5746 0 3 974,149,19, 0,993,1411, +,+,+, 688693 Satellite W-chromosome 585 chrUn_NT_470371v1 5822 6940 GGXHOI 518 + 5822 6940 0 2 813,19, 0,1099, +,+, 688695 Satellite W-chromosome 585 chrUn_NT_470371v1 7018 8832 GGXHOI 524 + 7018 8832 0 3 494,461,108, 0,1039,1706, +,+,+, 688697 Satellite W-chromosome 585 chrUn_NT_470372v1 105 1046 (GCCTG)n 471 + 105 1046 0 4 208,64,41,260, 0,385,625,681, +,+,+,+, 688701 Simple_repeat Simple_repeat 585 chrUn_NT_470372v1 1197 1457 (CCTCG)n 412 + 1197 1457 0 2 65,90, 0,170, +,+, 688706 Simple_repeat Simple_repeat 585 chrUn_NT_470372v1 4518 7320 GGERVL-B-int 652 + 4518 7320 0 2 1924,878, 0,1924, +,+, 688717 LTR ERVL 585 chrUn_NT_470372v1 8052 8379 GGLTR7B 331 + 8052 8379 0 2 98,204, 0,123, +,+, 688719 LTR ERV1 585 chrUn_NT_470373v1 1037 2796 GGXHOI 403 - 1037 2796 0 4 360,142,650,520, 0,380,533,1239, -,-,-,-, 688721 Satellite W-chromosome 585 chrUn_NT_470373v1 3390 4242 GGXHOI 393 - 3390 4242 0 2 379,458, 0,394, -,-, 688722 Satellite W-chromosome 585 chrUn_NT_470373v1 6690 8713 GGXHOI 383 - 6690 8713 0 3 400,891,702, 0,419,1321, -,-,-, 688728 Satellite W-chromosome 585 chrUn_NT_470374v1 7351 8820 GGXHOI 554 - 7351 8820 0 3 320,18,294, 0,952,1175, -,-,-, 688736 Satellite W-chromosome 585 chrUn_NT_470375v1 5388 5637 (CTCTATGGGG)n 272 - 5388 5637 0 2 120,114, 0,135, -,-, 688745 Satellite Satellite 585 chrUn_NT_470375v1 7756 8058 (ACCCATTGGG)n 473 + 7756 8058 0 2 126,131, 0,171, +,+, 688747 Satellite Satellite 585 chrUn_NT_470376v1 1067 1396 (GCCCCACAGCT)n 554 + 1067 1396 0 2 161,33, 0,296, +,+, 688749 Satellite Satellite 585 chrUn_NT_470376v1 4413 5030 (ACCCATAGGG)n 638 - 4413 5030 0 2 184,32, 0,585, -,-, 688763 Satellite Satellite 585 chrUn_NT_470376v1 5009 5360 (ACCCCATAGGG)n 520 - 5009 5360 0 2 179,73, 0,278, -,-, 688767 Satellite Satellite 585 chrUn_NT_470376v1 5188 5461 (ACCCATAGGG)n 649 - 5188 5461 0 2 99,172, 0,101, -,-, 688768 Satellite Satellite 585 chrUn_NT_470376v1 5377 5816 (ACCCATAGAG)n 656 - 5377 5816 0 2 145,51, 0,388, -,-, 688769 Satellite Satellite 585 chrUn_NT_470377v1 1934 2644 (CCCTAA)n 635 + 1934 2644 0 2 516,178, 0,532, +,+, 688777 Simple_repeat Simple_repeat 585 chrUn_NT_470377v1 6330 8032 GGXHOI 441 + 6330 8032 0 4 132,141,1107,219, 0,145,345,1483, +,+,+,+, 688790 Satellite W-chromosome 585 chrUn_NT_470377v1 8152 8635 GGXHOI 445 + 8152 8635 0 2 374,93, 0,390, +,+, 688791 Satellite W-chromosome 585 chrUn_NT_470378v1 766 1240 (CGAGG)n 559 + 766 1240 0 2 239,182, 0,292, +,+, 688796 Simple_repeat Simple_repeat 585 chrUn_NT_470378v1 1731 4247 (CGAGG)n 568 + 1731 4247 0 8 179,389,310,103,209,243,195,227, 0,179,751,1307,1597,1813,2056,2289, +,+,+,+,+,+,+,+, 688801 Simple_repeat Simple_repeat 585 chrUn_NT_470378v1 4298 4880 (CGAGG)n 544 + 4298 4880 0 2 359,181, 0,401, +,+, 688806 Simple_repeat Simple_repeat 585 chrUn_NT_470378v1 5605 6317 (CGAGG)n 552 + 5605 6317 0 2 485,181, 0,531, +,+, 688811 Simple_repeat Simple_repeat 585 chrUn_NT_470378v1 6450 7669 (CGAGG)n 563 + 6450 7669 0 4 423,35,106,276, 0,603,816,943, +,+,+,+, 688815 Simple_repeat Simple_repeat 585 chrUn_NT_470378v1 7700 8823 (CGAGG)n 558 + 7700 8823 0 5 131,63,185,274,20, 0,293,391,576,1103, +,+,+,+,+, 688819 Simple_repeat Simple_repeat 585 chrUn_NT_470379v1 700 1404 GGXHOI 409 - 700 1404 0 2 136,529, 0,175, -,-, 688824 Satellite W-chromosome 585 chrUn_NT_470379v1 1469 2458 GGXHOI 374 - 1469 2458 0 4 229,413,141,126, 0,279,708,863, -,-,-,-, 688825 Satellite W-chromosome 585 chrUn_NT_470379v1 3477 5720 GGXHOI 355 - 3477 5720 0 5 898,759,123,237,144, 0,914,1690,1828,2099, -,-,-,-,-, 688828 Satellite W-chromosome 585 chrUn_NT_470379v1 7592 8784 GGXHOI 392 - 7592 8784 0 2 435,716, 0,476, -,-, 688830 Satellite W-chromosome 585 chrUn_NT_470380v1 1135 1374 (ACCCATTGGG)n 346 - 1135 1374 0 2 107,110, 0,129, -,-, 688833 Satellite Satellite 585 chrUn_NT_470382v1 4935 6057 CR1-B2 679 - 4935 6057 0 2 895,224, 0,898, -,-, 688866 LINE CR1 585 chrUn_NT_470386v1 210 1333 GGXHOI 444 - 210 1333 0 2 661,443, 0,680, -,-, 688909 Satellite W-chromosome 585 chrUn_NT_470386v1 1399 3365 GGXHOI 357 - 1399 3365 0 3 442,636,858, 0,455,1108, -,-,-, 688910 Satellite W-chromosome 585 chrUn_NT_470386v1 3497 5579 GGXHOI 362 - 3497 5579 0 4 1175,569,136,151, 0,1191,1779,1931, -,-,-,-, 688911 Satellite W-chromosome 585 chrUn_NT_470386v1 6763 7993 GGXHOI 425 - 6763 7993 0 2 628,578, 0,652, -,-, 688913 Satellite W-chromosome 585 chrUn_NT_470387v1 1834 5969 CR1-F 491 - 1834 5969 0 11 191,204,154,210,100,219,199,155,203,204,201, 0,410,910,1338,1939,2085,2534,3022,3443,3688,3934, -,-,-,-,-,-,-,-,-,-,-, 688919 LINE CR1 585 chrUn_NT_470387v1 6012 8768 CR1-F 517 - 6012 8768 0 8 190,202,155,204,200,203,194,185, 0,441,933,1352,1599,1840,2336,2571, -,-,-,-,-,-,-,-, 688925 LINE CR1 585 chrUn_NT_470388v1 1721 2450 (CCTTG)n 654 + 1721 2450 0 2 125,300, 0,429, +,+, 688938 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 2406 2760 (ACTTG)n 446 + 2406 2760 0 2 119,55, 0,299, +,+, 688942 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 2725 3137 (CCTTG)n 637 + 2725 3137 0 2 179,193, 0,219, +,+, 688944 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 3091 4069 (GCCTG)n 482 + 3091 4069 0 3 75,75,413, 0,260,565, +,+,+, 688945 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 3671 4543 (CCTTG)n 617 + 3671 4543 0 3 500,153,61, 0,500,811, +,+,+, 688948 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 4661 5082 (CCTTG)n 477 + 4661 5082 0 2 191,193, 0,228, +,+, 688951 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 5892 6690 (CCTTG)n 602 + 5892 6690 0 2 368,369, 0,429, +,+, 688957 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 6863 8567 (CCTTG)n 665 + 6863 8567 0 7 543,178,179,166,13,29,198, 0,581,776,970,1259,1449,1506, +,+,+,+,+,+,+, 688958 Simple_repeat Simple_repeat 585 chrUn_NT_470388v1 8571 8766 (GCCTG)n 488 + 8571 8766 0 2 12,10, 0,185, +,+, 688961 Simple_repeat Simple_repeat 585 chrUn_NT_470391v1 557 2967 GGERVL-B-int 708 + 557 2967 0 4 200,53,725,894, 0,587,641,1516, +,+,+,+, 688970 LTR ERVL 585 chrUn_NT_470391v1 3702 5097 GGLTR7-int 348 + 3702 5097 0 3 101,210,287, 0,127,1108, +,+,+, 688972 LTR ERV1 585 chrUn_NT_470394v1 1921 8814 GGXHOI 435 - 1921 8814 0 8 57,610,477,1142,1141,1109,1130,1051, 0,80,743,1240,2402,3563,4692,5842, -,-,-,-,-,-,-,-, 688985 Satellite W-chromosome 585 chrUn_NT_470395v1 8105 8810 Z-REP 821 - 8105 8810 0 2 83,508, 0,197, -,-, 688992 Satellite macro 585 chrUn_NT_470397v1 1971 5407 GGXHOI 465 - 1971 5407 0 6 407,75,246,307,1006,283, 0,418,886,1452,1944,3153, -,-,-,-,-,-, 689001 Satellite W-chromosome 585 chrUn_NT_470397v1 5487 8805 GGXHOI 481 - 5487 8805 0 7 260,196,675,199,29,298,67, 0,276,487,1486,1707,2046,3251, -,-,-,-,-,-,-, 689006 Satellite W-chromosome 585 chrUn_NT_470398v1 233 1308 GGXHOI 526 + 233 1308 0 2 728,144, 0,931, +,+, 689011 Satellite W-chromosome 585 chrUn_NT_470398v1 4822 5469 GGXHOI 526 + 4822 5469 0 2 329,19, 0,628, +,+, 689020 Satellite W-chromosome 585 chrUn_NT_470398v1 5546 7063 GGXHOI 498 + 5546 7063 0 2 799,522, 0,995, +,+, 689022 Satellite W-chromosome 585 chrUn_NT_470398v1 7081 7627 GGXHOI 552 + 7081 7627 0 2 332,26, 0,520, +,+, 689025 Satellite W-chromosome 585 chrUn_NT_470398v1 7693 8748 GGXHOI 542 + 7693 8748 0 2 146,678, 0,377, +,+, 689027 Satellite W-chromosome 585 chrUn_NT_470399v1 6429 6829 (CCTTG)n 516 + 6429 6829 0 2 194,30, 0,370, +,+, 689041 Simple_repeat Simple_repeat 585 chrUn_NT_470399v1 7207 7364 (TCTCC)n 308 + 7207 7364 0 2 73,21, 0,136, +,+, 689045 Simple_repeat Simple_repeat 585 chrUn_NT_470399v1 7600 8185 (GCCTG)n 514 + 7600 8185 0 2 187,209, 0,376, +,+, 689048 Simple_repeat Simple_repeat 585 chrUn_NT_470400v1 110 685 (CGGAG)n 271 + 110 685 0 2 365,210, 0,365, +,+, 689052 Simple_repeat Simple_repeat 585 chrUn_NT_470400v1 1499 2926 (CGGAG)n 232 + 1499 2926 0 6 205,179,209,189,267,199, 0,238,448,708,950,1228, +,+,+,+,+,+, 689054 Simple_repeat Simple_repeat 585 chrUn_NT_470400v1 6160 7564 (CGGAG)n 248 + 6160 7564 0 6 185,178,209,261,30,199, 0,218,427,667,1164,1205, +,+,+,+,+,+, 689062 Simple_repeat Simple_repeat 585 chrUn_NT_470401v1 937 1970 GGXHOI 541 - 937 1970 0 4 11,154,18,207, 0,343,509,826, -,-,-,-, 689068 Satellite W-chromosome 585 chrUn_NT_470401v1 2040 3088 GGXHOI 522 - 2040 3088 0 3 24,364,38, 0,340,1010, -,-,-, 689071 Satellite W-chromosome 585 chrUn_NT_470401v1 3164 7861 GGXHOI 514 - 3164 7861 0 7 18,140,198,181,1321,148,439, 0,301,940,1434,2074,3705,4258, -,-,-,-,-,-,-, 689074 Satellite W-chromosome 585 chrUn_NT_470402v1 6954 8806 GGXHOI 407 - 6954 8806 0 2 705,1120, 0,732, -,-, 689086 Satellite W-chromosome 585 chrUn_NT_470403v1 1832 2317 GGXHOI 329 + 1832 2317 0 2 153,287, 0,198, +,+, 689088 Satellite W-chromosome 585 chrUn_NT_470403v1 3444 4945 GGXHOI 374 + 3444 4945 0 2 1341,138, 0,1363, +,+, 689090 Satellite W-chromosome 585 chrUn_NT_470403v1 6108 7036 GGXHOI 330 + 6108 7036 0 2 486,419, 0,509, +,+, 689092 Satellite W-chromosome 585 chrUn_NT_470403v1 7157 8707 GGXHOI 363 + 7157 8707 0 3 172,411,914, 0,205,636, +,+,+, 689093 Satellite W-chromosome 585 chrUn_NT_470404v1 3515 4849 CR1-X 425 - 3515 4849 0 3 51,168,111, 0,120,1223, -,-,-, 689097 LINE CR1 585 chrUn_NT_470406v1 1376 1792 (CCTTG)n 486 + 1376 1792 0 2 189,216, 0,200, +,+, 689109 Simple_repeat Simple_repeat 585 chrUn_NT_470406v1 1719 2061 (GCCTG)n 520 + 1719 2061 0 2 119,43, 0,299, +,+, 689110 Simple_repeat Simple_repeat 585 chrUn_NT_470406v1 2034 3497 (CCTTG)n 672 + 2034 3497 0 7 203,178,247,114,26,91,215, 0,218,396,659,952,1157,1248, +,+,+,+,+,+,+, 689112 Simple_repeat Simple_repeat 585 chrUn_NT_470406v1 3569 5203 (CCTTG)n 628 + 3569 5203 0 6 230,196,376,46,199,181, 0,230,452,1007,1232,1453, +,+,+,+,+,+, 689116 Simple_repeat Simple_repeat 585 chrUn_NT_470406v1 5246 6660 (CCTTG)n 627 + 5246 6660 0 6 204,185,259,136,189,216, 0,235,420,833,1009,1198, +,+,+,+,+,+, 689120 Simple_repeat Simple_repeat 585 chrUn_NT_470406v1 7194 7874 (CCTTG)n 475 + 7194 7874 0 3 198,184,224, 0,230,456, +,+,+, 689125 Simple_repeat Simple_repeat 585 chrUn_NT_470406v1 8012 8803 (CCTTG)n 589 + 8012 8803 0 3 188,459,107, 0,210,684, +,+,+, 689127 Simple_repeat Simple_repeat 585 chrUn_NT_470408v1 2789 3534 (CGAGG)n 525 + 2789 3534 0 3 326,181,187, 0,345,558, +,+,+, 689145 Simple_repeat Simple_repeat 585 chrUn_NT_470408v1 5158 5737 (CGAGG)n 518 + 5158 5737 0 2 182,367, 0,212, +,+, 689153 Simple_repeat Simple_repeat 585 chrUn_NT_470408v1 7909 8775 (CGAGG)n 513 + 7909 8775 0 3 175,449,179, 0,195,687, +,+,+, 689162 Simple_repeat Simple_repeat 585 chrUn_NT_470409v1 1787 4050 GGXHOI 503 + 1787 4050 0 3 339,1189,688, 0,375,1575, +,+,+, 689165 Satellite W-chromosome 585 chrUn_NT_470409v1 5746 8274 GGXHOI 528 + 5746 8274 0 2 1532,721, 0,1807, +,+, 689168 Satellite W-chromosome 585 chrUn_NT_470411v1 5152 5936 CR1-F 265 + 5152 5936 0 2 213,571, 0,213, +,+, 689187 LINE CR1 585 chrUn_NT_470412v1 360 2071 GGXHOI 499 - 360 2071 0 4 156,309,558,616, 0,182,508,1095, -,-,-,-, 689189 Satellite W-chromosome 585 chrUn_NT_470412v1 6547 7575 GGXHOI 540 - 6547 7575 0 2 227,578, 0,450, -,-, 689193 Satellite W-chromosome 585 chrUn_NT_470412v1 7642 8796 GGXHOI 524 - 7642 8796 0 2 750,183, 0,971, -,-, 689195 Satellite W-chromosome 585 chrUn_NT_470414v1 6574 7869 GGXHOI 428 - 6574 7869 0 2 252,1028, 0,267, -,-, 689225 Satellite W-chromosome 585 chrUn_NT_470414v1 7992 8781 GGXHOI 406 - 7992 8781 0 2 191,587, 0,202, -,-, 689226 Satellite W-chromosome 585 chrUn_NT_470416v1 3203 4359 CR1-F 798 + 3203 4359 0 2 344,290, 0,866, +,+, 689235 LINE CR1 585 chrUn_NT_470416v1 6403 6702 GGLTR3E1 704 - 6403 6702 0 2 138,161, 0,138, -,-, 689239 LTR ERVL 585 chrUn_NT_470417v1 1950 2547 (CGAGG)n 515 + 1950 2547 0 3 176,203,182, 0,187,415, +,+,+, 689249 Simple_repeat Simple_repeat 585 chrUn_NT_470417v1 3127 4119 (CGAGG)n 465 + 3127 4119 0 3 537,194,58, 0,563,934, +,+,+, 689251 Simple_repeat Simple_repeat 585 chrUn_NT_470417v1 5443 5820 (CGAGG)n 561 + 5443 5820 0 2 176,179, 0,198, +,+, 689256 Simple_repeat Simple_repeat 585 chrUn_NT_470417v1 5969 7166 (CGAGG)n 478 + 5969 7166 0 5 328,93,183,184,177, 0,504,624,821,1020, +,+,+,+,+, 689258 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 1317 1895 (CGAGG)n 622 + 1317 1895 0 2 390,177, 0,401, +,+, 689275 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 2843 3450 (CGAGG)n 582 + 2843 3450 0 2 180,377, 0,230, +,+, 689279 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 3528 4177 (CGAGG)n 602 + 3528 4177 0 2 183,455, 0,194, +,+, 689281 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 4536 5075 (CGAGG)n 649 + 4536 5075 0 3 181,137,188, 0,203,351, +,+,+, 689285 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 5759 6439 (CGAGG)n 582 + 5759 6439 0 2 240,46, 0,634, +,+, 689291 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 6395 6945 (CAAGG)n 434 + 6395 6945 0 2 114,245, 0,305, +,+, 689294 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 6733 7473 (CGAGG)n 518 + 6733 7473 0 2 532,25, 0,715, +,+, 689296 Simple_repeat Simple_repeat 585 chrUn_NT_470419v1 7571 8769 (CGAGG)n 614 + 7571 8769 0 5 219,186,182,174,194, 0,256,464,648,1004, +,+,+,+,+, 689298 Simple_repeat Simple_repeat 585 chrUn_NT_470421v1 2216 4555 GGERVL-B-int 689 + 2216 4555 0 2 1838,501, 0,1838, +,+, 689322 LTR ERVL 585 chrUn_NT_470421v1 5218 6613 GGLTR7-int 295 + 5218 6613 0 3 101,315,280, 0,103,1115, +,+,+, 689324 LTR ERV1 585 chrUn_NT_470422v1 1536 1955 GGXHOI 303 + 1536 1955 0 2 113,247, 0,172, +,+, 689327 Satellite W-chromosome 585 chrUn_NT_470422v1 2139 3566 GGXHOI 355 + 2139 3566 0 3 362,672,276, 0,419,1151, +,+,+, 689328 Satellite W-chromosome 585 chrUn_NT_470422v1 4875 5759 GGXHOI 340 + 4875 5759 0 2 271,596, 0,288, +,+, 689331 Satellite W-chromosome 585 chrUn_NT_470422v1 6640 8166 GGXHOI 332 + 6640 8166 0 2 1335,130, 0,1396, +,+, 689333 Satellite W-chromosome 585 chrUn_NT_470423v1 4208 4613 (CCCTAA)n 559 + 4208 4613 0 2 178,171, 0,234, +,+, 689337 Simple_repeat Simple_repeat 585 chrUn_NT_470424v1 4654 4910 CR1-X2 484 - 4654 4910 0 2 189,62, 0,194, -,-, 689347 LINE CR1 585 chrUn_NT_470429v1 4934 5239 GGXHOI 265 - 4934 5239 0 2 157,132, 0,173, -,-, 689401 Satellite W-chromosome 585 chrUn_NT_470429v1 5338 7261 GGXHOI 415 - 5338 7261 0 5 313,360,170,394,617, 0,334,706,892,1306, -,-,-,-,-, 689402 Satellite W-chromosome 585 chrUn_NT_470429v1 7330 8784 GGXHOI 346 - 7330 8784 0 4 103,124,860,276, 0,120,303,1178, -,-,-,-, 689403 Satellite W-chromosome 585 chrUn_NT_470430v1 798 3511 GGERVL-B-int 694 + 798 3511 0 2 1811,902, 0,1811, +,+, 689406 LTR ERVL 585 chrUn_NT_470430v1 4283 5559 GGLTR7-int 303 + 4283 5559 0 2 254,286, 0,990, +,+, 689407 LTR ERV1 585 chrUn_NT_470431v1 676 1321 GGXHOI 574 + 676 1321 0 2 387,22, 0,623, +,+, 689411 Satellite W-chromosome 585 chrUn_NT_470431v1 1412 6484 GGXHOI 568 + 1412 6484 0 5 903,22,29,28,27, 0,1966,2207,3541,5045, +,+,+,+,+, 689414 Satellite W-chromosome 585 chrUn_NT_470432v1 668 3097 GGXHOI 464 + 668 3097 0 4 1593,145,581,58, 0,1609,1770,2371, +,+,+,+, 689421 Satellite W-chromosome 585 chrUn_NT_470432v1 3146 5063 GGXHOI 408 - 3146 5063 0 2 670,1228, 0,689, -,-, 689422 Satellite W-chromosome 585 chrUn_NT_470432v1 5084 5891 GGXHOI 390 - 5084 5891 0 2 307,479, 0,328, -,-, 689424 Satellite W-chromosome 585 chrUn_NT_470432v1 5920 7676 GGXHOI 390 - 5920 7676 0 3 368,904,447, 0,384,1309, -,-,-, 689426 Satellite W-chromosome 585 chrUn_NT_470434v1 443 5649 GGERVL18-int 649 - 443 5649 0 5 195,2197,346,908,323, 0,199,3010,3656,4883, -,-,-,-,-, 689433 LTR ERVL 585 chrUn_NT_470434v1 6412 8767 GGERV10_LTR 937 - 6412 8767 0 2 220,2135, 0,220, -,-, 689438 LTR ERVL 585 chrUn_NT_470435v1 1083 3143 (CGAGG)n 537 + 1083 3143 0 4 475,519,693,170, 0,488,1018,1890, +,+,+,+, 689445 Simple_repeat Simple_repeat 585 chrUn_NT_470435v1 3208 4251 (CGAGG)n 541 + 3208 4251 0 2 604,401, 0,642, +,+, 689447 Simple_repeat Simple_repeat 585 chrUn_NT_470435v1 5120 5740 (CGAGG)n 551 + 5120 5740 0 3 183,180,184, 0,222,436, +,+,+, 689451 Simple_repeat Simple_repeat 585 chrUn_NT_470435v1 6104 7370 (CGAGG)n 531 + 6104 7370 0 3 768,272,179, 0,797,1087, +,+,+, 689455 Simple_repeat Simple_repeat 585 chrUn_NT_470435v1 7445 8248 (CGAGG)n 606 + 7445 8248 0 3 367,171,87, 0,367,716, +,+,+, 689457 Simple_repeat Simple_repeat 585 chrUn_NT_470437v1 431 1199 (CAAGG)n 618 + 431 1199 0 2 363,373, 0,395, +,+, 689473 Simple_repeat Simple_repeat 585 chrUn_NT_470437v1 1778 3130 (CAAGG)n 592 + 1778 3130 0 3 160,142,106, 0,412,1246, +,+,+, 689479 Simple_repeat Simple_repeat 585 chrUn_NT_470437v1 3197 3946 (CAAGG)n 621 + 3197 3946 0 3 331,35,180, 0,508,569, +,+,+, 689485 Simple_repeat Simple_repeat 585 chrUn_NT_470437v1 4004 4500 (CAAGG)n 566 + 4004 4500 0 2 204,115, 0,381, +,+, 689488 Simple_repeat Simple_repeat 585 chrUn_NT_470437v1 5084 5692 (CAAGG)n 596 + 5084 5692 0 2 194,400, 0,208, +,+, 689493 Simple_repeat Simple_repeat 585 chrUn_NT_470443v1 2922 3419 (CTCTATGGGG)n 710 + 2922 3419 0 2 215,164, 0,333, +,+, 689527 Satellite Satellite 585 chrUn_NT_470443v1 3480 4140 (CTCTATGGGG)n 726 + 3480 4140 0 4 123,119,167,72, 0,158,299,588, +,+,+,+, 689530 Satellite Satellite 585 chrUn_NT_470443v1 4813 5652 (ACCCATAGAG)n 702 - 4813 5652 0 5 169,124,81,280,21, 0,169,293,374,818, -,-,-,-,-, 689537 Satellite Satellite 585 chrUn_NT_470443v1 5818 6149 (ACCCATAGAG)n 764 - 5818 6149 0 2 164,152, 0,179, -,-, 689541 Satellite Satellite 585 chrUn_NT_470443v1 7562 7896 (ACCCCATAGGG)n 749 - 7562 7896 0 2 146,188, 0,146, -,-, 689547 Satellite Satellite 585 chrUn_NT_470445v1 687 5160 GGXHOI 338 - 687 5160 0 6 226,221,126,659,1138,1912, 0,251,507,671,1375,2561, -,-,-,-,-,-, 689560 Satellite W-chromosome 585 chrUn_NT_470445v1 5276 5685 GGXHOI 413 - 5276 5685 0 2 143,224, 0,185, -,-, 689561 Satellite W-chromosome 585 chrUn_NT_470445v1 5809 8664 GGXHOI 319 - 5809 8664 0 2 1997,796, 0,2059, -,-, 689562 Satellite W-chromosome 585 chrUn_NT_470448v1 4760 5188 (CTCTATGGGG)n 609 - 4760 5188 0 3 118,80,128, 0,162,300, -,-,-, 689599 Satellite Satellite 585 chrUn_NT_470448v1 5340 5964 (CTCTATGGGG)n 592 - 5340 5964 0 4 118,128,111,132, 0,165,337,492, -,-,-,-, 689601 Satellite Satellite 585 chrUn_NT_470449v1 358 4549 GGXHOI 383 - 358 4549 0 11 134,174,818,227,429,341,837,150,218,431,230, 0,155,350,1189,1430,1873,2240,3097,3278,3515,3961, -,-,-,-,-,-,-,-,-,-,-, 689604 Satellite W-chromosome 585 chrUn_NT_470449v1 6574 8734 GGXHOI 375 - 6574 8734 0 3 973,459,662, 0,1021,1498, -,-,-, 689606 Satellite W-chromosome 585 chrUn_NT_470451v1 3759 5600 CR1-D 189 - 3759 5600 0 2 1028,260, 0,1581, -,-, 689615 LINE CR1 585 chrUn_NT_470452v1 383 3682 GGXHOI 418 + 383 3682 0 5 1078,148,1112,306,582, 0,1090,1260,2389,2717, +,+,+,+,+, 689625 Satellite W-chromosome 585 chrUn_NT_470452v1 3781 7804 GGXHOI 376 + 3781 7804 0 5 150,1410,1258,644,473, 0,172,1604,2884,3550, +,+,+,+,+, 689626 Satellite W-chromosome 585 chrUn_NT_470454v1 4440 5070 CR1-C 704 - 4440 5070 0 2 65,565, 0,65, -,-, 689667 LINE CR1 585 chrUn_NT_470455v1 2908 5356 GGLTR7-int 609 - 2908 5356 0 3 793,849,338, 0,800,2110, -,-,-, 689675 LTR ERV1 585 chrUn_NT_470456v1 4878 5895 GGXHOI 376 + 4878 5895 0 3 142,258,587, 0,156,430, +,+,+, 689688 Satellite W-chromosome 585 chrUn_NT_470456v1 5986 7612 GGXHOI 374 + 5986 7612 0 6 169,301,417,124,317,175, 0,210,528,957,1098,1451, +,+,+,+,+,+, 689689 Satellite W-chromosome 585 chrUn_NT_470457v1 2738 5085 GGXHOI 536 - 2738 5085 0 2 404,784, 0,1563, -,-, 689697 Satellite W-chromosome 585 chrUn_NT_470457v1 4828 6498 Sat-CR1_GG 162 - 4828 6498 0 2 300,671, 0,999, -,-, 689699 Satellite Satellite 585 chrUn_NT_470457v1 5870 8538 GGXHOI 551 - 5870 8538 0 5 859,187,22,22,28, 0,1338,1573,1825,2640, -,-,-,-,-, 689701 Satellite W-chromosome 585 chrUn_NT_470458v1 5009 5325 GGERV10_LTR 578 - 5009 5325 0 2 159,66, 0,250, -,-, 689708 LTR ERVL 585 chrUn_NT_470458v1 6290 7214 TguLTR5e 343 + 6290 7214 0 2 98,166, 0,758, +,+, 689710 LTR ERVL 585 chrUn_NT_470458v1 7228 8746 CR1-D 427 + 7228 8746 0 2 1103,162, 0,1356, +,+, 689712 LINE CR1 585 chrUn_NT_470459v1 717 3984 GGXHOI 393 + 717 3984 0 2 2123,1128, 0,2139, +,+, 689715 Satellite W-chromosome 585 chrUn_NT_470459v1 5896 8261 GGXHOI 347 + 5896 8261 0 3 145,789,1338, 0,176,1027, +,+,+, 689720 Satellite W-chromosome 585 chrUn_NT_470459v1 8432 8732 GGXHOI 386 + 8432 8732 0 2 169,115, 0,185, +,+, 689721 Satellite W-chromosome 585 chrUn_NT_470460v1 1200 2410 GGXHOI 546 - 1200 2410 0 2 136,873, 0,337, -,-, 689724 Satellite W-chromosome 585 chrUn_NT_470460v1 3865 6984 GGXHOI 478 - 3865 6984 0 4 1308,303,908,338, 0,1327,1665,2781, -,-,-,-, 689727 Satellite W-chromosome 585 chrUn_NT_470462v1 1609 6484 GGXHOI 371 - 1609 6484 0 3 1563,1280,1934, 0,1625,2941, -,-,-, 689739 Satellite W-chromosome 585 chrUn_NT_470462v1 6862 8738 GGXHOI 372 - 6862 8738 0 4 108,1274,287,129, 0,130,1416,1747, -,-,-,-, 689741 Satellite W-chromosome 585 chrUn_NT_470464v1 1764 3297 GGXHOI 407 - 1764 3297 0 4 169,780,87,450, 0,191,985,1083, -,-,-,-, 689755 Satellite W-chromosome 585 chrUn_NT_470464v1 3295 3677 GGLTR3F1 689 + 3295 3677 0 2 205,102, 0,280, +,+, 689756 LTR ERVL 585 chrUn_NT_470464v1 3681 5900 GGERVL-A-int 737 + 3681 5900 0 3 1163,493,558, 0,1167,1661, +,+,+, 689757 LTR ERVL 585 chrUn_NT_470464v1 5886 8485 GGLTR3F1 877 + 5886 8485 0 2 2111,488, 0,2111, +,+, 689758 LTR ERVL 585 chrUn_NT_470465v1 1251 1560 CR1-X 547 + 1251 1560 0 3 171,78,50, 0,171,259, +,+,+, 689761 LINE CR1 585 chrUn_NT_470465v1 6938 8071 CR1-B2 686 + 6938 8071 0 2 225,905, 0,228, +,+, 689764 LINE CR1 585 chrUn_NT_470467v1 2583 3927 CR1-H 659 - 2583 3927 0 2 116,1228, 0,116, -,-, 689779 LINE CR1 585 chrUn_NT_470467v1 5645 5754 (TTTGC)n 326 + 5645 5754 0 2 52,8, 0,101, +,+, 689780 Simple_repeat Simple_repeat 585 chrUn_NT_470469v1 347 1637 Sat-CR1_GG 154 + 347 1637 0 2 886,241, 0,1049, +,+, 689804 Satellite Satellite 585 chrUn_NT_470469v1 1440 5548 GGXHOI 544 + 1440 5548 0 4 789,123,147,224, 0,1264,3206,3884, +,+,+,+, 689806 Satellite W-chromosome 585 chrUn_NT_470469v1 5618 7275 GGXHOI 394 + 5618 7275 0 2 739,876, 0,781, +,+, 689810 Satellite W-chromosome 585 chrUn_NT_470472v1 435 908 (CAT)n 228 + 435 908 0 2 336,122, 0,351, +,+, 689823 Simple_repeat Simple_repeat 585 chrUn_NT_470472v1 3892 4562 (ACCCATAGAG)n 686 + 3892 4562 0 2 206,452, 0,218, +,+, 689828 Satellite Satellite 585 chrUn_NT_470472v1 4737 5163 (ACCCATAGAG)n 709 + 4737 5163 0 2 122,291, 0,135, +,+, 689831 Satellite Satellite 585 chrUn_NT_470473v1 778 923 GA-rich 300 + 778 923 0 2 43,45, 0,100, +,+, 689835 Low_complexity Low_complexity 585 chrUn_NT_470473v1 5284 5429 GA-rich 300 + 5284 5429 0 2 43,45, 0,100, +,+, 689845 Low_complexity Low_complexity 585 chrUn_NT_470474v1 792 3655 GGXHOI 363 - 792 3655 0 3 459,1057,1287, 0,477,1576, -,-,-, 689852 Satellite W-chromosome 585 chrUn_NT_470474v1 4010 6367 GGXHOI 360 - 4010 6367 0 2 528,1771, 0,586, -,-, 689853 Satellite W-chromosome 585 chrUn_NT_470475v1 4053 4914 GGXHOI 352 + 4053 4914 0 2 209,635, 0,226, +,+, 689859 Satellite W-chromosome 585 chrUn_NT_470477v1 5073 6996 GGXHOI 318 - 5073 6996 0 2 417,1444, 0,479, -,-, 689867 Satellite W-chromosome 585 chrUn_NT_470479v1 8117 8725 (CCCTAA)n 554 + 8117 8725 0 3 181,189,187, 0,220,421, +,+,+, 689903 Simple_repeat Simple_repeat 585 chrUn_NT_470482v1 2585 3925 GGXHOI 311 - 2585 3925 0 3 183,895,231, 0,202,1109, -,-,-, 689942 Satellite W-chromosome 585 chrUn_NT_470482v1 4096 4933 GGXHOI 316 - 4096 4933 0 2 419,366, 0,471, -,-, 689943 Satellite W-chromosome 585 chrUn_NT_470482v1 5016 6392 GGXHOI 334 - 5016 6392 0 2 103,1253, 0,123, -,-, 689944 Satellite W-chromosome 585 chrUn_NT_470482v1 6949 8724 GGXHOI 377 - 6949 8724 0 2 113,1641, 0,134, -,-, 689946 Satellite W-chromosome 585 chrUn_NT_470483v1 7447 8458 (ACCCATAGGG)n 620 + 7447 8458 0 3 566,50,37, 0,813,974, +,+,+, 689954 Satellite Satellite 585 chrUn_NT_470484v1 350 3164 GGXHOI 349 - 350 3164 0 7 174,524,321,100,259,1191,120, 0,186,722,1055,1180,1489,2694, -,-,-,-,-,-,-, 689959 Satellite W-chromosome 585 chrUn_NT_470484v1 3300 5411 GGXHOI 452 - 3300 5411 0 5 856,155,548,170,263, 0,905,1071,1660,1848, -,-,-,-,-, 689960 Satellite W-chromosome 585 chrUn_NT_470484v1 5504 6103 GGXHOI 362 - 5504 6103 0 2 423,160, 0,439, -,-, 689961 Satellite W-chromosome 585 chrUn_NT_470484v1 6278 8714 GGXHOI 432 - 6278 8714 0 4 473,666,999,224, 0,503,1184,2212, -,-,-,-, 689962 Satellite W-chromosome 585 chrUn_NT_470486v1 925 2487 GGXHOI 548 - 925 2487 0 2 36,585, 0,977, -,-, 689994 Satellite W-chromosome 585 chrUn_NT_470486v1 3620 6886 GGXHOI 550 - 3620 6886 0 2 310,1691, 0,1575, -,-, 689999 Satellite W-chromosome 585 chrUn_NT_470486v1 7018 8690 Sat-CR1_GG 174 - 7018 8690 0 2 673,719, 0,953, -,-, 690003 Satellite Satellite 585 chrUn_NT_470488v1 5624 6032 (ACCCCATAGGG)n 223 + 5624 6032 0 2 148,203, 0,205, +,+, 690011 Satellite Satellite 585 chrUn_NT_470489v1 2128 2591 CR1-X1 556 + 2128 2591 0 2 352,111, 0,352, +,+, 690013 LINE CR1 585 chrUn_NT_470489v1 4321 4431 (TTTGC)n 336 + 4321 4431 0 2 52,9, 0,101, +,+, 690015 Simple_repeat Simple_repeat 585 chrUn_NT_470490v1 1992 2579 CR1-H 580 - 1992 2579 0 2 147,333, 0,254, -,-, 690024 LINE CR1 585 chrUn_NT_470490v1 4759 5972 CR1-H 486 - 4759 5972 0 2 107,1106, 0,107, -,-, 690027 LINE CR1 585 chrUn_NT_470492v1 389 1510 CR1-B2 707 - 389 1510 0 2 893,225, 0,896, -,-, 690035 LINE CR1 585 chrUn_NT_470492v1 6721 6969 CR1-X 505 - 6721 6969 0 2 77,171, 0,77, -,-, 690041 LINE CR1 585 chrUn_NT_470494v1 574 7962 GGXHOI 394 + 574 7962 0 11 157,840,1126,96,254,708,1541,912,258,1110,150, 0,204,1056,2223,2331,2607,3334,4898,5827,6108,7238, +,+,+,+,+,+,+,+,+,+,+, 690063 Satellite W-chromosome 585 chrUn_NT_470494v1 8237 8675 GGXHOI 374 + 8237 8675 0 3 127,184,99, 0,139,339, +,+,+, 690064 Satellite W-chromosome 585 chrUn_NT_470495v1 60 987 (TTAGGG)n 624 + 60 987 0 3 210,281,206, 0,398,721, +,+,+, 690066 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 1015 1689 (TTAGGG)n 630 + 1015 1689 0 3 112,113,30, 0,290,644, +,+,+, 690069 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 1736 2332 (TTAGGG)n 609 + 1736 2332 0 2 189,364, 0,232, +,+, 690073 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 2415 2824 (TTAGGG)n 572 + 2415 2824 0 2 178,184, 0,225, +,+, 690075 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 2878 3693 (TTAGGG)n 560 + 2878 3693 0 2 437,180, 0,635, +,+, 690077 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 3805 4246 (CCCTAA)n 435 + 3805 4246 0 2 177,207, 0,234, +,+, 690080 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 4355 4938 (CCCTAA)n 487 + 4355 4938 0 3 199,128,81, 0,199,502, +,+,+, 690082 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 5384 5780 (CCTAA)n 618 + 5384 5780 0 2 171,36, 0,360, +,+, 690085 Simple_repeat Simple_repeat 585 chrUn_NT_470495v1 7803 8699 GGXHOI 289 + 7803 8699 0 2 481,395, 0,501, +,+, 690091 Satellite W-chromosome 585 chrUn_NT_470497v1 4488 7389 GGXHOI 570 - 4488 7389 0 3 494,371,68, 0,2020,2833, -,-,-, 690112 Satellite W-chromosome 585 chrUn_NT_470497v1 7431 8699 GGXHOI 504 - 7431 8699 0 2 600,632, 0,636, -,-, 690116 Satellite W-chromosome 585 chrUn_NT_470498v1 1173 3298 GGXHOI 398 - 1173 3298 0 2 703,1405, 0,720, -,-, 690118 Satellite W-chromosome 585 chrUn_NT_470498v1 3362 5588 GGXHOI 375 - 3362 5588 0 2 305,1905, 0,321, -,-, 690119 Satellite W-chromosome 585 chrUn_NT_470498v1 5687 7889 GGXHOI 390 - 5687 7889 0 4 686,150,575,746, 0,708,870,1456, -,-,-,-, 690120 Satellite W-chromosome 585 chrUn_NT_470499v1 971 1702 GGXHOI 389 - 971 1702 0 2 303,409, 0,322, -,-, 690124 Satellite W-chromosome 585 chrUn_NT_470499v1 1900 3073 GGXHOI 347 - 1900 3073 0 3 197,400,508, 0,208,665, -,-,-, 690125 Satellite W-chromosome 585 chrUn_NT_470499v1 3993 4738 GGXHOI 388 - 3993 4738 0 2 443,284, 0,461, -,-, 690128 Satellite W-chromosome 585 chrUn_NT_470499v1 5774 8696 GGXHOI 433 - 5774 8696 0 4 269,528,140,1939, 0,280,821,983, -,-,-,-, 690130 Satellite W-chromosome 585 chrUn_NT_470501v1 5957 6608 CR1-F2 474 - 5957 6608 0 2 371,280, 0,371, -,-, 690140 LINE CR1 585 chrUn_NT_470502v1 4992 6147 (ACCCATAGGG)n 718 - 4992 6147 0 5 229,131,91,132,335, 0,229,477,688,820, -,-,-,-,-, 690145 Satellite Satellite 585 chrUn_NT_470502v1 6274 6507 (ACCCATAGGG)n 724 - 6274 6507 0 2 85,30, 0,203, -,-, 690149 Satellite Satellite 585 chrUn_NT_470502v1 7002 7308 (CTCTATGGGG)n 504 + 7002 7308 0 2 118,126, 0,180, +,+, 690152 Satellite Satellite 585 chrUn_NT_470502v1 7480 8005 (CTCTATGGGG)n 575 + 7480 8005 0 2 118,365, 0,160, +,+, 690153 Satellite Satellite 585 chrUn_NT_470505v1 773 2422 GGXHOI 416 - 773 2422 0 6 181,97,206,269,331,410, 0,199,334,591,880,1239, -,-,-,-,-,-, 690162 Satellite W-chromosome 585 chrUn_NT_470505v1 2513 5921 GGXHOI 399 - 2513 5921 0 11 187,169,419,526,415,307,138,227,383,142,202, 0,207,390,826,1371,1838,2162,2359,2613,3026,3206, -,-,-,-,-,-,-,-,-,-,-, 690163 Satellite W-chromosome 585 chrUn_NT_470505v1 6042 8007 GGXHOI 391 - 6042 8007 0 2 481,1472, 0,493, -,-, 690164 Satellite W-chromosome 585 chrUn_NT_470505v1 8108 8659 GGXHOI 281 - 8108 8659 0 2 333,170, 0,381, -,-, 690165 Satellite W-chromosome 585 chrUn_NT_470507v1 737 4301 GGXHOI 358 + 737 4301 0 4 2544,400,338,138, 0,2606,3068,3426, +,+,+,+, 690173 Satellite W-chromosome 585 chrUn_NT_470508v1 5546 6451 GGXHOI 353 - 5546 6451 0 2 509,379, 0,526, -,-, 690186 Satellite W-chromosome 585 chrUn_NT_470509v1 4746 5808 (CTCTATGGGG)n 533 + 4746 5808 0 6 124,121,175,54,197,57, 0,136,292,591,688,1005, +,+,+,+,+,+, 690199 Satellite Satellite 585 chrUn_NT_470509v1 5819 6240 (CTCTATGGGG)n 614 - 5819 6240 0 2 217,82, 0,339, -,-, 690202 Satellite Satellite 585 chrUn_NT_470510v1 3188 4126 GGXHOI 480 + 3188 4126 0 3 316,151,397, 0,374,541, +,+,+, 690217 Satellite W-chromosome 585 chrUn_NT_470510v1 4218 8683 GGXHOI 448 + 4218 8683 0 8 1994,414,808,186,154,149,207,298, 0,2035,2506,3330,3538,3709,3904,4167, +,+,+,+,+,+,+,+, 690218 Satellite W-chromosome 585 chrUn_NT_470511v1 860 1466 GGLTR3A 461 - 860 1466 0 2 351,167, 0,439, -,-, 690220 LTR ERVL 585 chrUn_NT_470511v1 5066 6516 GGLTR3D 617 - 5066 6516 0 2 824,626, 0,824, -,-, 690221 LTR ERVL 585 chrUn_NT_470511v1 6672 7878 GGERV10_LTR 452 + 6672 7878 0 2 149,1053, 0,153, +,+, 690223 LTR ERVL 585 chrUn_NT_470512v1 5062 7806 GGERVL-B-int 696 - 5062 7806 0 2 916,1828, 0,916, -,-, 690230 LTR ERVL 585 chrUn_NT_470516v1 1986 3081 GGXHOI 536 - 1986 3081 0 2 19,793, 0,302, -,-, 690248 Satellite W-chromosome 585 chrUn_NT_470516v1 3491 4294 GGXHOI 553 - 3491 4294 0 3 107,220,203, 0,127,600, -,-,-, 690251 Satellite W-chromosome 585 chrUn_NT_470516v1 4703 6673 GGXHOI 546 - 4703 6673 0 5 107,180,290,305,203, 0,127,557,1140,1767, -,-,-,-,-, 690254 Satellite W-chromosome 585 chrUn_NT_470518v1 1811 2359 (CAAGG)n 600 + 1811 2359 0 2 179,344, 0,204, +,+, 690286 Simple_repeat Simple_repeat 585 chrUn_NT_470518v1 3538 3983 (CAAGG)n 686 + 3538 3983 0 2 192,75, 0,370, +,+, 690295 Simple_repeat Simple_repeat 585 chrUn_NT_470518v1 5779 6853 (CCTTG)n 502 + 5779 6853 0 5 239,163,182,123,80, 0,281,476,691,994, +,+,+,+,+, 690307 Simple_repeat Simple_repeat 585 chrUn_NT_470518v1 7114 8213 (CAAGG)n 494 + 7114 8213 0 4 189,50,462,178, 0,368,444,921, +,+,+,+, 690310 Simple_repeat Simple_repeat 585 chrUn_NT_470518v1 8268 8666 (CCTTG)n 498 + 8268 8666 0 2 260,122, 0,276, +,+, 690312 Simple_repeat Simple_repeat 585 chrUn_NT_470520v1 2227 2437 (ACCCCATAGGG)n 162 - 2227 2437 0 2 61,40, 0,170, -,-, 690327 Satellite Satellite 585 chrUn_NT_470520v1 6034 6410 (CTCTATGGGG)n 597 + 6034 6410 0 3 53,32,114, 0,181,262, +,+,+, 690340 Satellite Satellite 585 chrUn_NT_470520v1 7647 8080 (CTCTATGGGG)n 398 - 7647 8080 0 2 245,71, 0,362, -,-, 690348 Satellite Satellite 585 chrUn_NT_470521v1 4780 5656 CR1-F0 895 - 4780 5656 0 2 138,738, 0,138, -,-, 690360 LINE CR1 585 chrUn_NT_470521v1 5757 6201 (CCTTG)n 578 + 5757 6201 0 2 125,142, 0,302, +,+, 690362 Simple_repeat Simple_repeat 585 chrUn_NT_470521v1 6076 6524 (GCCTG)n 555 + 6076 6524 0 2 180,241, 0,207, +,+, 690364 Simple_repeat Simple_repeat 585 chrUn_NT_470521v1 6418 7303 (CCTTG)n 511 + 6418 7303 0 3 504,84,78, 0,533,807, +,+,+, 690365 Simple_repeat Simple_repeat 585 chrUn_NT_470521v1 7294 7880 (GCCTG)n 512 + 7294 7880 0 2 176,367, 0,219, +,+, 690367 Simple_repeat Simple_repeat 585 chrUn_NT_470521v1 8601 8671 (GGCCT)n 374 + 8601 8671 0 2 8,17, 0,53, +,+, 690374 Simple_repeat Simple_repeat 585 chrUn_NT_470523v1 4997 8613 GGXHOI 560 + 4997 8613 0 2 3002,28, 0,3588, +,+, 690400 Satellite W-chromosome 585 chrUn_NT_470524v1 716 1304 (TTAGGG)n 558 + 716 1304 0 3 154,41,176, 0,337,412, +,+,+, 690404 Simple_repeat Simple_repeat 585 chrUn_NT_470524v1 2484 3199 (CCCTAA)n 762 + 2484 3199 0 2 180,535, 0,180, +,+, 690411 Simple_repeat Simple_repeat 585 chrUn_NT_470524v1 3253 3935 (CCCTAA)n 590 + 3253 3935 0 2 184,452, 0,230, +,+, 690413 Simple_repeat Simple_repeat 585 chrUn_NT_470524v1 3946 5064 (CCCTAA)n 616 + 3946 5064 0 4 176,182,383,112, 0,227,445,1006, +,+,+,+, 690415 Simple_repeat Simple_repeat 585 chrUn_NT_470524v1 5092 5916 (CCCTAA)n 627 + 5092 5916 0 3 206,176,369, 0,248,455, +,+,+, 690418 Simple_repeat Simple_repeat 585 chrUn_NT_470524v1 6400 7649 (CCCTAA)n 607 + 6400 7649 0 4 128,69,439,235, 0,316,396,1014, +,+,+,+, 690419 Simple_repeat Simple_repeat 585 chrUn_NT_470524v1 8084 8661 (CCCTAA)n 645 + 8084 8661 0 3 178,165,178, 0,193,399, +,+,+, 690425 Simple_repeat Simple_repeat 585 chrUn_NT_470525v1 1246 1900 (CGAGG)n 497 + 1246 1900 0 2 449,179, 0,475, +,+, 690428 Simple_repeat Simple_repeat 585 chrUn_NT_470525v1 1986 2984 (CGAGG)n 583 + 1986 2984 0 2 368,591, 0,407, +,+, 690430 Simple_repeat Simple_repeat 585 chrUn_NT_470525v1 3674 4269 (CGAGG)n 496 + 3674 4269 0 2 187,354, 0,241, +,+, 690434 Simple_repeat Simple_repeat 585 chrUn_NT_470525v1 4351 4972 (CGAGG)n 483 + 4351 4972 0 3 214,198,180, 0,214,441, +,+,+, 690436 Simple_repeat Simple_repeat 585 chrUn_NT_470525v1 5812 6353 (CGAGG)n 488 + 5812 6353 0 2 182,325, 0,216, +,+, 690440 Simple_repeat Simple_repeat 585 chrUn_NT_470526v1 7216 7770 (CATTG)n 389 + 7216 7770 0 2 202,300, 0,254, +,+, 690458 Simple_repeat Simple_repeat 585 chrUn_NT_470526v1 7854 8229 (CATTG)n 480 + 7854 8229 0 2 175,175, 0,200, +,+, 690460 Simple_repeat Simple_repeat 585 chrUn_NT_470527v1 652 1907 GGXHOI 355 - 652 1907 0 2 348,850, 0,405, -,-, 690462 Satellite W-chromosome 585 chrUn_NT_470527v1 2413 4220 GGXHOI 369 - 2413 4220 0 3 393,608,739, 0,448,1068, -,-,-, 690464 Satellite W-chromosome 585 chrUn_NT_470527v1 7152 7613 GGXHOI 410 - 7152 7613 0 2 193,249, 0,212, -,-, 690471 Satellite W-chromosome 585 chrUn_NT_470527v1 7703 8666 GGXHOI 392 - 7703 8666 0 2 440,465, 0,498, -,-, 690472 Satellite W-chromosome 585 chrUn_NT_470529v1 1225 2223 GGXHOI 462 + 1225 2223 0 3 231,187,548, 0,249,450, +,+,+, 690482 Satellite W-chromosome 585 chrUn_NT_470529v1 2655 5575 GGXHOI 350 + 2655 5575 0 5 101,670,254,118,1601, 0,113,866,1138,1319, +,+,+,+,+, 690484 Satellite W-chromosome 585 chrUn_NT_470529v1 5682 8662 GGXHOI 391 + 5682 8662 0 3 671,668,1563, 0,689,1417, +,+,+, 690485 Satellite W-chromosome 585 chrUn_NT_470531v1 7399 8606 GGLTR7-int 263 - 7399 8606 0 2 275,180, 0,1027, -,-, 690495 LTR ERV1 585 chrUn_NT_470534v1 2676 4702 GGXHOI 359 - 2676 4702 0 2 285,1699, 0,327, -,-, 690514 Satellite W-chromosome 585 chrUn_NT_470535v1 949 1737 GGXHOI 371 + 949 1737 0 2 472,254, 0,534, +,+, 690519 Satellite W-chromosome 585 chrUn_NT_470535v1 1953 3004 GGXHOI 387 + 1953 3004 0 2 472,516, 0,535, +,+, 690520 Satellite W-chromosome 585 chrUn_NT_470535v1 4149 4967 GGXHOI 357 + 4149 4967 0 2 472,284, 0,534, +,+, 690523 Satellite W-chromosome 585 chrUn_NT_470535v1 7316 8655 GGXHOI 328 + 7316 8655 0 2 357,920, 0,419, +,+, 690528 Satellite W-chromosome 585 chrUn_NT_470536v1 719 1566 Z-REP 533 + 719 1566 0 2 440,323, 0,524, +,+, 690530 Satellite macro 585 chrUn_NT_470536v1 6181 8099 GGLTR7-int 661 - 6181 8099 0 4 33,74,655,526, 0,34,737,1392, -,-,-,-, 690534 LTR ERV1 585 chrUn_NT_470538v1 1002 1828 GGXHOI 352 - 1002 1828 0 2 477,291, 0,535, -,-, 690544 Satellite W-chromosome 585 chrUn_NT_470538v1 3519 4511 GGXHOI 347 - 3519 4511 0 2 645,288, 0,704, -,-, 690546 Satellite W-chromosome 585 chrUn_NT_470539v1 3342 4669 GGXHOI 431 - 3342 4669 0 4 629,253,95,269, 0,643,914,1058, -,-,-,-, 690555 Satellite W-chromosome 585 chrUn_NT_470539v1 4751 5604 GGXHOI 407 - 4751 5604 0 2 271,564, 0,289, -,-, 690556 Satellite W-chromosome 585 chrUn_NT_470539v1 5683 7132 GGXHOI 380 - 5683 7132 0 4 583,136,493,155, 0,600,749,1294, -,-,-,-, 690557 Satellite W-chromosome 585 chrUn_NT_470539v1 7244 7536 GGXHOI 295 - 7244 7536 0 2 116,132, 0,160, -,-, 690558 Satellite W-chromosome 585 chrUn_NT_470539v1 7609 8604 GGXHOI 392 - 7609 8604 0 2 180,798, 0,197, -,-, 690559 Satellite W-chromosome 585 chrUn_NT_470541v1 631 1001 (CAAGG)n 575 + 631 1001 0 2 180,190, 0,180, +,+, 690564 Simple_repeat Simple_repeat 585 chrUn_NT_470541v1 1086 1461 (CAAGG)n 672 + 1086 1461 0 2 177,181, 0,194, +,+, 690566 Simple_repeat Simple_repeat 585 chrUn_NT_470541v1 2264 3262 (CAAGG)n 662 + 2264 3262 0 4 182,234,230,115, 0,186,474,883, +,+,+,+, 690569 Simple_repeat Simple_repeat 585 chrUn_NT_470541v1 3328 4046 (CAAGG)n 593 + 3328 4046 0 2 177,505, 0,213, +,+, 690572 Simple_repeat Simple_repeat 585 chrUn_NT_470541v1 4153 5306 (CAAGG)n 626 + 4153 5306 0 4 232,553,85,89, 0,235,800,1064, +,+,+,+, 690574 Simple_repeat Simple_repeat 585 chrUn_NT_470541v1 5382 6122 (CAAGG)n 629 + 5382 6122 0 2 224,504, 0,236, +,+, 690577 Simple_repeat Simple_repeat 585 chrUn_NT_470541v1 6912 7821 (CAAGG)n 623 + 6912 7821 0 2 521,368, 0,541, +,+, 690581 Simple_repeat Simple_repeat 585 chrUn_NT_470542v1 3306 4704 GGLTR7-int 321 + 3306 4704 0 3 101,291,280, 0,127,1118, +,+,+, 690590 LTR ERV1 585 chrUn_NT_470543v1 2320 7771 GGXHOI 574 - 2320 7771 0 3 311,210,3952, 0,808,1499, -,-,-, 690596 Satellite W-chromosome 585 chrUn_NT_470546v1 89 2820 GGERVL-B-int 639 + 89 2820 0 3 1046,739,910, 0,1082,1821, +,+,+, 690611 LTR ERVL 585 chrUn_NT_470546v1 3557 4952 GGLTR7-int 335 + 3557 4952 0 3 101,260,289, 0,103,1106, +,+,+, 690613 LTR ERV1 585 chrUn_NT_470547v1 660 762 (C)n 807 + 660 762 0 2 39,21, 0,81, +,+, 690616 Simple_repeat Simple_repeat 585 chrUn_NT_470547v1 4695 4765 (G)n 868 + 4695 4765 0 2 25,17, 0,53, +,+, 690626 Simple_repeat Simple_repeat 585 chrUn_NT_470548v1 4130 4590 (CGAGG)n 508 + 4130 4590 0 2 195,94, 0,366, +,+, 690643 Simple_repeat Simple_repeat 585 chrUn_NT_470548v1 4634 5656 (CGAGG)n 577 + 4634 5656 0 5 104,21,107,193,214, 0,297,508,615,808, +,+,+,+,+, 690646 Simple_repeat Simple_repeat 585 chrUn_NT_470548v1 5727 7031 (CGAGG)n 512 + 5727 7031 0 5 499,89,75,164,31, 0,523,796,915,1273, +,+,+,+,+, 690649 Simple_repeat Simple_repeat 585 chrUn_NT_470548v1 7536 8032 (CGAGG)n 605 + 7536 8032 0 2 229,252, 0,244, +,+, 690652 Simple_repeat Simple_repeat 585 chrUn_NT_470549v1 84 2654 CR1-F 525 + 84 2654 0 8 200,203,204,201,154,204,200,179, 0,502,747,993,1459,1903,2149,2391, +,+,+,+,+,+,+,+, 690659 LINE CR1 585 chrUn_NT_470549v1 2697 5650 CR1-F 563 + 2697 5650 0 10 174,189,200,203,203,204,155,199,101,179, 0,219,450,950,1195,1440,1910,2355,2592,2774, +,+,+,+,+,+,+,+,+,+, 690663 LINE CR1 585 chrUn_NT_470549v1 5694 8637 CR1-F 586 + 5694 8637 0 9 178,189,200,203,204,204,157,200,96, 0,223,452,951,1196,1442,1913,2348,2847, +,+,+,+,+,+,+,+,+, 690667 LINE CR1 585 chrUn_NT_470550v1 3832 4454 CR1-H 678 - 3832 4454 0 2 139,477, 0,145, -,-, 690676 LINE CR1 585 chrUn_NT_470550v1 6267 7491 CR1-H 577 - 6267 7491 0 3 118,387,708, 0,118,516, -,-,-, 690679 LINE CR1 585 chrUn_NT_470551v1 3865 4014 G-rich 512 + 3865 4014 0 2 37,58, 0,91, +,+, 690681 Low_complexity Low_complexity 585 chrUn_NT_470552v1 5934 6096 G-rich 224 + 5934 6096 0 2 57,51, 0,111, +,+, 690688 Low_complexity Low_complexity 585 chrUn_NT_470554v1 1228 2389 (CCTTG)n 657 + 1228 2389 0 4 183,6,194,410, 0,372,557,751, +,+,+,+, 690701 Simple_repeat Simple_repeat 585 chrUn_NT_470554v1 2417 2957 (CCTTG)n 616 + 2417 2957 0 2 227,136, 0,404, +,+, 690705 Simple_repeat Simple_repeat 585 chrUn_NT_470554v1 3616 4226 (CCTTG)n 467 + 3616 4226 0 2 200,383, 0,227, +,+, 690710 Simple_repeat Simple_repeat 585 chrUn_NT_470554v1 4539 5126 (CCTTG)n 625 + 4539 5126 0 2 374,213, 0,374, +,+, 690714 Simple_repeat Simple_repeat 585 chrUn_NT_470554v1 5491 6195 (CCTTG)n 605 + 5491 6195 0 3 209,176,281, 0,229,423, +,+,+, 690717 Simple_repeat Simple_repeat 585 chrUn_NT_470554v1 6227 8576 (CCTTG)n 587 + 6227 8576 0 9 188,632,182,151,50,208,248,93,71, 0,242,893,1091,1416,1479,1703,1983,2278, +,+,+,+,+,+,+,+,+, 690719 Simple_repeat Simple_repeat 585 chrUn_NT_470558v1 4605 5987 GGLTR7-int 297 - 4605 5987 0 3 273,312,100, 0,968,1282, -,-,-, 690743 LTR ERV1 585 chrUn_NT_470558v1 6383 6637 (CTCTATGGGG)n 424 + 6383 6637 0 2 60,73, 0,181, +,+, 690744 Satellite Satellite 585 chrUn_NT_470558v1 6720 8624 GGERVL-B-int 796 - 6720 8624 0 2 895,1009, 0,895, -,-, 690746 LTR ERVL 585 chrUn_NT_470559v1 1794 2073 (CCCCATTGGG)n 543 - 1794 2073 0 2 111,119, 0,160, -,-, 690748 Satellite Satellite 585 chrUn_NT_470559v1 2186 3042 (CCCCATTGGG)n 456 - 2186 3042 0 6 110,116,116,116,118,117, 0,123,299,446,609,739, -,-,-,-,-,-, 690749 Satellite Satellite 585 chrUn_NT_470559v1 3201 3453 (CCCCATTGGG)n 555 - 3201 3453 0 2 108,114, 0,138, -,-, 690750 Satellite Satellite 585 chrUn_NT_470559v1 3792 4480 (ACCCATAGGG)n 702 + 3792 4480 0 4 179,124,129,16, 0,296,420,672, +,+,+,+, 690751 Satellite Satellite 585 chrUn_NT_470560v1 5112 6912 GGXHOI 370 + 5112 6912 0 3 328,1078,296, 0,390,1504, +,+,+, 690773 Satellite W-chromosome 585 chrUn_NT_470560v1 6976 8272 GGXHOI 362 + 6976 8272 0 2 956,324, 0,972, +,+, 690774 Satellite W-chromosome 585 chrUn_NT_470561v1 1306 1753 GGXHOI 419 - 1306 1753 0 2 270,150, 0,297, -,-, 690779 Satellite W-chromosome 585 chrUn_NT_470561v1 2084 4575 GGXHOI 389 - 2084 4575 0 3 1385,718,333, 0,1425,2158, -,-,-, 690780 Satellite W-chromosome 585 chrUn_NT_470561v1 4660 8610 GGXHOI 398 - 4660 8610 0 5 322,1125,637,927,775, 0,384,1534,2186,3175, -,-,-,-,-, 690781 Satellite W-chromosome 585 chrUn_NT_470562v1 107 512 (CGAGG)n 575 + 107 512 0 2 178,182, 0,223, +,+, 690783 Simple_repeat Simple_repeat 585 chrUn_NT_470562v1 1787 3615 (CGAGG)n 576 + 1787 3615 0 7 181,185,215,261,186,329,177, 0,221,431,827,1099,1309,1651, +,+,+,+,+,+,+, 690789 Simple_repeat Simple_repeat 585 chrUn_NT_470562v1 3691 4638 (CGAGG)n 524 + 3691 4638 0 2 268,508, 0,439, +,+, 690792 Simple_repeat Simple_repeat 585 chrUn_NT_470562v1 6005 6576 (CGAGG)n 534 + 6005 6576 0 2 130,262, 0,309, +,+, 690799 Simple_repeat Simple_repeat 585 chrUn_NT_470562v1 6621 7480 (CGAGG)n 551 + 6621 7480 0 2 183,660, 0,199, +,+, 690802 Simple_repeat Simple_repeat 585 chrUn_NT_470562v1 7548 8152 (CGAGG)n 555 + 7548 8152 0 3 182,179,202, 0,223,402, +,+,+, 690804 Simple_repeat Simple_repeat 585 chrUn_NT_470563v1 1550 2289 GGXHOI 313 - 1550 2289 0 2 349,346, 0,393, -,-, 690811 Satellite W-chromosome 585 chrUn_NT_470563v1 2419 6058 GGXHOI 318 - 2419 6058 0 5 341,433,569,1832,387, 0,363,813,1399,3252, -,-,-,-,-, 690812 Satellite W-chromosome 585 chrUn_NT_470563v1 6912 7855 GGXHOI 327 - 6912 7855 0 2 378,546, 0,397, -,-, 690814 Satellite W-chromosome 585 chrUn_NT_470568v1 79 1284 (CCTCG)n 575 + 79 1284 0 4 195,409,180,360, 0,222,651,845, +,+,+,+, 690868 Simple_repeat Simple_repeat 585 chrUn_NT_470568v1 1804 4438 (CCTCG)n 546 + 1804 4438 0 6 362,223,178,618,898,89, 0,387,649,838,1468,2545, +,+,+,+,+,+, 690873 Simple_repeat Simple_repeat 585 chrUn_NT_470568v1 4725 5200 (CCTCG)n 542 + 4725 5200 0 2 96,199, 0,276, +,+, 690875 Simple_repeat Simple_repeat 585 chrUn_NT_470568v1 5869 6537 (CCTCG)n 544 + 5869 6537 0 2 177,303, 0,365, +,+, 690881 Simple_repeat Simple_repeat 585 chrUn_NT_470571v1 5038 6025 CR1-B2 571 - 5038 6025 0 2 808,153, 0,834, -,-, 690897 LINE CR1 585 chrUn_NT_470573v1 2535 4693 GGXHOI 457 - 2535 4693 0 4 1140,231,336,341, 0,1186,1447,1817, -,-,-,-, 690901 Satellite W-chromosome 585 chrUn_NT_470573v1 4758 6520 GGXHOI 451 - 4758 6520 0 4 472,155,147,944, 0,488,654,818, -,-,-,-, 690902 Satellite W-chromosome 585 chrUn_NT_470573v1 6666 8583 GGXHOI 406 - 6666 8583 0 3 589,313,981, 0,605,936, -,-,-, 690903 Satellite W-chromosome 585 chrUn_NT_470574v1 2378 2642 (ACCCCATAGGG)n 331 + 2378 2642 0 2 101,104, 0,160, +,+, 690909 Satellite Satellite 585 chrUn_NT_470574v1 5337 5770 (ATGGTG)n 680 + 5337 5770 0 2 199,54, 0,379, +,+, 690911 Simple_repeat Simple_repeat 585 chrUn_NT_470574v1 5740 8144 (ATG)n 718 + 5740 8144 0 5 108,416,143,150,684, 0,291,970,1114,1720, +,+,+,+,+, 690913 Simple_repeat Simple_repeat 585 chrUn_NT_470574v1 8198 8608 (ATG)n 625 + 8198 8608 0 2 180,220, 0,190, +,+, 690918 Simple_repeat Simple_repeat 585 chrUn_NT_470577v1 543 3167 GGXHOI 365 - 543 3167 0 8 669,116,417,229,121,126,632,142, 0,693,824,1257,1501,1660,1833,2482, -,-,-,-,-,-,-,-, 690929 Satellite W-chromosome 585 chrUn_NT_470577v1 3277 4350 GGXHOI 434 - 3277 4350 0 4 134,217,531,144, 0,150,382,929, -,-,-,-, 690930 Satellite W-chromosome 585 chrUn_NT_470577v1 4429 4725 GGXHOI 488 - 4429 4725 0 2 140,140, 0,156, -,-, 690931 Satellite W-chromosome 585 chrUn_NT_470577v1 4797 6155 GGXHOI 411 - 4797 6155 0 7 150,145,157,79,458,123,133, 0,175,338,511,607,1087,1225, -,-,-,-,-,-,-, 690932 Satellite W-chromosome 585 chrUn_NT_470577v1 6245 8607 GGXHOI 422 - 6245 8607 0 8 144,142,682,129,101,298,519,169, 0,175,333,1037,1177,1319,1654,2193, -,-,-,-,-,-,-,-, 690933 Satellite W-chromosome 585 chrUn_NT_470580v1 2405 2925 GGXHOI 582 - 2405 2925 0 2 217,114, 0,406, -,-, 690949 Satellite W-chromosome 585 chrUn_NT_470580v1 3238 8583 GGXHOI 537 - 3238 8583 0 4 1849,1638,1238,181, 0,1881,3722,5164, -,-,-,-, 690952 Satellite W-chromosome 585 chrUn_NT_470581v1 823 1445 (CGAGG)n 507 + 823 1445 0 3 182,176,184, 0,214,438, +,+,+, 690959 Simple_repeat Simple_repeat 585 chrUn_NT_470581v1 2370 3045 (CGAGG)n 542 + 2370 3045 0 2 324,170, 0,505, +,+, 690967 Simple_repeat Simple_repeat 585 chrUn_NT_470581v1 5013 5823 (CGAGG)n 561 + 5013 5823 0 4 177,178,182,178, 0,196,408,632, +,+,+,+, 690976 Simple_repeat Simple_repeat 585 chrUn_NT_470581v1 5962 7327 (CGAGG)n 521 + 5962 7327 0 3 981,179,187, 0,999,1178, +,+,+, 690978 Simple_repeat Simple_repeat 585 chrUn_NT_470581v1 7339 7998 (CGAGG)n 534 + 7339 7998 0 2 266,209, 0,450, +,+, 690980 Simple_repeat Simple_repeat 585 chrUn_NT_470584v1 2508 5253 GGXHOI 417 - 2508 5253 0 11 253,136,278,136,382,200,429,137,144,152,177, 0,270,455,763,934,1331,1594,2036,2184,2377,2568, -,-,-,-,-,-,-,-,-,-,-, 691000 Satellite W-chromosome 585 chrUn_NT_470584v1 5385 5911 GGXHOI 425 - 5385 5911 0 3 138,158,207, 0,149,319, -,-,-, 691001 Satellite W-chromosome 585 chrUn_NT_470584v1 5986 8597 GGXHOI 403 - 5986 8597 0 10 174,140,286,216,372,86,143,291,445,310, 0,205,361,662,895,1283,1381,1541,1845,2301, -,-,-,-,-,-,-,-,-,-, 691002 Satellite W-chromosome 585 chrUn_NT_470585v1 4638 7918 GGXHOI 384 - 4638 7918 0 6 246,749,636,431,601,481, 0,269,1032,1693,2183,2799, -,-,-,-,-,-, 691004 Satellite W-chromosome 585 chrUn_NT_470587v1 1797 2101 CR1-F 440 - 1797 2101 0 2 192,85, 0,219, -,-, 691019 LINE CR1 585 chrUn_NT_470587v1 2306 8466 CR1-F 519 - 2306 8466 0 17 91,183,154,204,204,155,191,201,154,201,204,155,204,204,203,198,174, 0,173,647,1069,1315,1809,2232,2468,2959,3380,3623,4117,4540,4786,5032,5536,5986, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 691021 LINE CR1 585 chrUn_NT_470588v1 2257 3520 CR1-H 564 + 2257 3520 0 2 1154,109, 0,1154, +,+, 691034 LINE CR1 585 chrUn_NT_470588v1 5504 6131 CR1-H 692 + 5504 6131 0 2 469,139, 0,488, +,+, 691038 LINE CR1 585 chrUn_NT_470589v1 212 1003 GGXHOI 366 - 212 1003 0 4 202,127,195,132, 0,248,438,659, -,-,-,-, 691042 Satellite W-chromosome 585 chrUn_NT_470590v1 1518 2087 (CGAGG)n 532 + 1518 2087 0 2 337,179, 0,390, +,+, 691057 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 2292 2658 (CCTTG)n 475 + 2292 2658 0 2 174,192, 0,174, +,+, 691059 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 2558 3166 (CCTCG)n 536 + 2558 3166 0 2 367,64, 0,544, +,+, 691060 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 3230 3626 (CCTCG)n 467 + 3230 3626 0 2 181,181, 0,215, +,+, 691063 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 3721 4670 (CCTCG)n 565 + 3721 4670 0 3 447,207,283, 0,447,666, +,+,+, 691065 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 4714 5713 (CCTCG)n 593 + 4714 5713 0 4 321,44,182,180, 0,508,590,819, +,+,+,+, 691067 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 6147 6699 (CCTCG)n 501 + 6147 6699 0 3 91,187,177, 0,154,375, +,+,+, 691074 Simple_repeat Simple_repeat 585 chrUn_NT_470590v1 7882 8587 (CCTCG)n 474 + 7882 8587 0 2 371,309, 0,396, +,+, 691078 Simple_repeat Simple_repeat 585 chrUn_NT_470591v1 3906 4531 CR1-H 679 - 3906 4531 0 2 139,480, 0,145, -,-, 691080 LINE CR1 585 chrUn_NT_470591v1 7143 7599 CR1-H 671 - 7143 7599 0 2 162,294, 0,162, -,-, 691084 LINE CR1 585 chrUn_NT_470594v1 3024 3279 CR1-X2 549 - 3024 3279 0 2 122,62, 0,193, -,-, 691099 LINE CR1 585 chrUn_NT_470594v1 4894 8582 Z-REP 724 + 4894 8582 0 2 2807,778, 0,2910, +,+, 691101 Satellite macro 585 chrUn_NT_470595v1 132 584 CR1-F 514 + 132 584 0 2 195,212, 0,240, +,+, 691103 LINE CR1 585 chrUn_NT_470595v1 627 2672 CR1-F 521 + 627 2672 0 6 203,203,202,153,201,176, 0,245,490,954,1394,1869, +,+,+,+,+,+, 691104 LINE CR1 585 chrUn_NT_470595v1 2714 3106 CR1-F 763 + 2714 3106 0 2 167,174, 0,218, +,+, 691108 LINE CR1 585 chrUn_NT_470595v1 3148 4022 CR1-F 538 + 3148 4022 0 4 162,203,204,179, 0,204,449,695, +,+,+,+, 691109 LINE CR1 585 chrUn_NT_470595v1 4066 8579 CR1-F 529 + 4066 8579 0 14 176,186,200,199,201,204,154,198,179,151,197,198,152,136, 0,221,448,947,1188,1431,1901,2344,2818,3041,3481,3719,4181,4377, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 691110 LINE CR1 585 chrUn_NT_470597v1 3656 5963 GGXHOI 461 - 3656 5963 0 5 1456,146,107,224,271, 0,1474,1635,1759,2036, -,-,-,-,-, 691119 Satellite W-chromosome 585 chrUn_NT_470597v1 6073 7467 GGXHOI 343 - 6073 7467 0 2 151,1227, 0,167, -,-, 691120 Satellite W-chromosome 585 chrUn_NT_470597v1 7532 8579 GGXHOI 402 - 7532 8579 0 2 605,426, 0,621, -,-, 691121 Satellite W-chromosome 585 chrUn_NT_470598v1 896 1501 CR1-H 668 - 896 1501 0 2 138,461, 0,144, -,-, 691123 LINE CR1 585 chrUn_NT_470598v1 3769 5044 CR1-H 593 - 3769 5044 0 2 117,1158, 0,117, -,-, 691128 LINE CR1 585 chrUn_NT_470599v1 362 944 GGXHOI 574 + 362 944 0 2 29,19, 0,563, +,+, 691133 Satellite W-chromosome 585 chrUn_NT_470599v1 1210 2217 GGXHOI 526 + 1210 2217 0 2 499,457, 0,550, +,+, 691135 Satellite W-chromosome 585 chrUn_NT_470599v1 2293 4370 GGXHOI 386 + 2293 4370 0 4 518,725,416,155, 0,550,1471,1922, +,+,+,+, 691136 Satellite W-chromosome 585 chrUn_NT_470599v1 4445 5646 GGXHOI 572 + 4445 5646 0 3 269,386,19, 0,515,1182, +,+,+, 691138 Satellite W-chromosome 585 chrUn_NT_470599v1 5723 6804 GGXHOI 523 + 5723 6804 0 4 437,152,118,83, 0,479,681,998, +,+,+,+, 691141 Satellite W-chromosome 585 chrUn_NT_470599v1 6919 8032 GGXHOI 572 + 6919 8032 0 2 559,19, 0,1094, +,+, 691143 Satellite W-chromosome 585 chrUn_NT_470600v1 2601 8531 GGXHOI 533 - 2601 8531 0 3 2677,1306,1829, 0,2738,4101, -,-,-, 691148 Satellite W-chromosome 585 chrUn_NT_470603v1 5911 6365 (CTCTATGGGG)n 601 + 5911 6365 0 2 320,122, 0,332, +,+, 691161 Satellite Satellite 585 chrUn_NT_470603v1 7882 8142 (CTCTATGGGG)n 627 + 7882 8142 0 2 116,120, 0,140, +,+, 691168 Satellite Satellite 585 chrUn_NT_470605v1 3087 5018 GGXHOI 346 + 3087 5018 0 3 691,234,930, 0,710,1001, +,+,+, 691186 Satellite W-chromosome 585 chrUn_NT_470605v1 5867 8546 GGXHOI 376 + 5867 8546 0 4 635,956,490,475, 0,658,1651,2204, +,+,+,+, 691188 Satellite W-chromosome 585 chrUn_NT_470606v1 1169 1582 (CAAGG)n 566 + 1169 1582 0 2 154,80, 0,333, +,+, 691195 Simple_repeat Simple_repeat 585 chrUn_NT_470606v1 1602 2486 CR1-F0 882 + 1602 2486 0 2 751,133, 0,751, +,+, 691197 LINE CR1 585 chrUn_NT_470606v1 7388 7668 G-rich 425 + 7388 7668 0 2 80,174, 0,106, +,+, 691202 Low_complexity Low_complexity 585 chrUn_NT_470608v1 3846 5217 GGXHOI 545 - 3846 5217 0 2 825,534, 0,837, -,-, 691216 Satellite W-chromosome 585 chrUn_NT_470608v1 5260 6362 GGXHOI 574 - 5260 6362 0 2 281,328, 0,774, -,-, 691218 Satellite W-chromosome 585 chrUn_NT_470610v1 4195 8575 GGXHOI 411 + 4195 8575 0 3 1505,2655,114, 0,1552,4266, +,+,+, 691224 Satellite W-chromosome 585 chrUn_NT_470611v1 648 1154 GGXHOI 414 + 648 1154 0 2 212,255, 0,251, +,+, 691227 Satellite W-chromosome 585 chrUn_NT_470611v1 1220 4395 GGXHOI 540 + 1220 4395 0 6 1205,44,269,437,186,17, 0,1251,1531,1844,2650,3158, +,+,+,+,+,+, 691228 Satellite W-chromosome 585 chrUn_NT_470611v1 4465 5243 GGXHOI 537 + 4465 5243 0 3 101,27,210, 0,528,568, +,+,+, 691232 Satellite W-chromosome 585 chrUn_NT_470611v1 5589 6124 GGXHOI 553 + 5589 6124 0 3 47,23,272, 0,222,263, +,+,+, 691234 Satellite W-chromosome 585 chrUn_NT_470613v1 7382 8541 GGXHOI 398 - 7382 8541 0 2 931,173, 0,986, -,-, 691253 Satellite W-chromosome 585 chrUn_NT_470620v1 4855 5908 GGXHOI 408 - 4855 5908 0 2 444,568, 0,485, -,-, 691317 Satellite W-chromosome 585 chrUn_NT_470620v1 5984 7264 GGXHOI 413 - 5984 7264 0 2 615,624, 0,656, -,-, 691318 Satellite W-chromosome 585 chrUn_NT_470620v1 8113 8552 (CGAGG)n 602 + 8113 8552 0 2 181,226, 0,213, +,+, 691321 Simple_repeat Simple_repeat 585 chrUn_NT_470624v1 3266 4033 GGXHOI 417 + 3266 4033 0 2 255,499, 0,268, +,+, 691355 Satellite W-chromosome 585 chrUn_NT_470624v1 4160 7845 GGXHOI 414 + 4160 7845 0 7 206,241,1310,64,436,990,279, 0,246,500,1867,1951,2401,3406, +,+,+,+,+,+,+, 691356 Satellite W-chromosome 585 chrUn_NT_470624v1 7980 8551 GGXHOI 351 + 7980 8551 0 2 318,216, 0,355, +,+, 691357 Satellite W-chromosome 585 chrUn_NT_470626v1 2860 3760 (CGAGG)n 650 + 2860 3760 0 4 251,96,104,70, 0,262,548,830, +,+,+,+, 691362 Simple_repeat Simple_repeat 585 chrUn_NT_470626v1 5478 5858 (CCTTG)n 678 + 5478 5858 0 2 180,200, 0,180, +,+, 691368 Simple_repeat Simple_repeat 585 chrUn_NT_470626v1 5792 6248 (GCCTG)n 524 + 5792 6248 0 2 106,170, 0,286, +,+, 691369 Simple_repeat Simple_repeat 585 chrUn_NT_470626v1 6578 7238 (CCTTG)n 667 + 6578 7238 0 3 124,60,234, 0,303,426, +,+,+, 691373 Simple_repeat Simple_repeat 585 chrUn_NT_470626v1 6702 7087 (GCCTG)n 546 + 6702 7087 0 2 179,206, 0,179, +,+, 691374 Simple_repeat Simple_repeat 585 chrUn_NT_470626v1 7278 8013 (CCTTG)n 656 + 7278 8013 0 3 178,236,295, 0,188,440, +,+,+, 691376 Simple_repeat Simple_repeat 585 chrUn_NT_470626v1 8216 8336 (CTTGC)n 372 + 8216 8336 0 2 25,13, 0,107, +,+, 691379 Simple_repeat Simple_repeat 585 chrUn_NT_470628v1 1732 2150 (TTAGGG)n 718 + 1732 2150 0 2 176,225, 0,193, +,+, 691392 Simple_repeat Simple_repeat 585 chrUn_NT_470628v1 2210 3597 (TTAGGG)n 536 + 2210 3597 0 6 155,33,176,376,134,39, 0,368,426,632,1020,1348, +,+,+,+,+,+, 691394 Simple_repeat Simple_repeat 585 chrUn_NT_470628v1 3699 4756 (CCCTAA)n 616 + 3699 4756 0 2 751,245, 0,812, +,+, 691398 Simple_repeat Simple_repeat 585 chrUn_NT_470628v1 7287 7992 (CCCTAA)n 634 + 7287 7992 0 2 285,420, 0,285, +,+, 691414 Simple_repeat Simple_repeat 585 chrUn_NT_470628v1 8074 8533 (CCCTAA)n 624 + 8074 8533 0 2 216,36, 0,423, +,+, 691416 Simple_repeat Simple_repeat 585 chrUn_NT_470629v1 5193 8548 GGERVL-B-int 777 - 5193 8548 0 3 407,63,2884, 0,408,471, -,-,-, 691419 LTR ERVL 585 chrUn_NT_470630v1 2289 7231 GGXHOI 560 - 2289 7231 0 4 417,118,1110,3048, 0,462,768,1894, -,-,-,-, 691422 Satellite W-chromosome 585 chrUn_NT_470631v1 831 2873 GGXHOI 410 - 831 2873 0 3 1142,581,273, 0,1174,1769, -,-,-, 691428 Satellite W-chromosome 585 chrUn_NT_470631v1 3665 8537 GGXHOI 420 - 3665 8537 0 5 126,523,1923,560,1628, 0,178,725,2660,3244, -,-,-,-,-, 691431 Satellite W-chromosome 585 chrUn_NT_470633v1 6738 7238 (CCTTG)n 514 + 6738 7238 0 3 129,138,49, 0,140,451, +,+,+, 691446 Simple_repeat Simple_repeat 585 chrUn_NT_470633v1 7549 7640 (CCTGGC)n 350 + 7549 7640 0 2 37,37, 0,54, +,+, 691450 Simple_repeat Simple_repeat 585 chrUn_NT_470633v1 8016 8371 (GCCTG)n 424 + 8016 8371 0 2 99,76, 0,279, +,+, 691452 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 36 1345 (TTCCC)n 716 + 36 1345 0 2 569,684, 0,625, +,+, 691458 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 1626 1995 (CCTTG)n 621 + 1626 1995 0 2 175,182, 0,187, +,+, 691462 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 2161 4317 (CCTTG)n 630 + 2161 4317 0 10 179,200,201,233,201,16,29,28,182,242, 0,193,397,598,831,1214,1413,1667,1732,1914, +,+,+,+,+,+,+,+,+,+, 691464 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 4350 5120 (CCTTG)n 645 + 4350 5120 0 3 177,184,261, 0,201,509, +,+,+, 691469 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 5021 5330 (GCCTG)n 612 + 5021 5330 0 2 112,18, 0,291, +,+, 691471 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 5347 5871 (CCTTG)n 674 + 5347 5871 0 2 131,214, 0,310, +,+, 691474 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 5618 6389 (GCCTG)n 502 + 5618 6389 0 2 284,306, 0,465, +,+, 691476 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 6515 7721 (CCTTG)n 645 + 6515 7721 0 4 264,59,126,384, 0,441,696,822, +,+,+,+, 691480 Simple_repeat Simple_repeat 585 chrUn_NT_470634v1 7766 8309 (CCTTG)n 592 + 7766 8309 0 2 204,304, 0,239, +,+, 691484 Simple_repeat Simple_repeat 585 chrUn_NT_470638v1 771 5115 GGXHOI 540 - 771 5115 0 5 539,491,60,830,1137, 0,878,1650,2050,3207, -,-,-,-,-, 691497 Satellite W-chromosome 585 chrUn_NT_470638v1 5200 7441 GGXHOI 542 - 5200 7441 0 3 534,821,205, 0,873,2036, -,-,-, 691502 Satellite W-chromosome 585 chrUn_NT_470638v1 7529 8535 GGXHOI 544 - 7529 8535 0 3 197,59,131, 0,480,875, -,-,-, 691505 Satellite W-chromosome 585 chrUn_NT_470641v1 1133 1840 (TTAGGG)n 656 + 1133 1840 0 2 178,496, 0,211, +,+, 691515 Simple_repeat Simple_repeat 585 chrUn_NT_470641v1 1836 3134 GGXHOI 379 - 1836 3134 0 2 487,791, 0,507, -,-, 691516 Satellite W-chromosome 585 chrUn_NT_470641v1 3811 4585 (TTAGGG)n 499 + 3811 4585 0 3 196,185,367, 0,207,407, +,+,+, 691519 Simple_repeat Simple_repeat 585 chrUn_NT_470641v1 4983 8530 GGXHOI 356 - 4983 8530 0 7 578,276,388,135,1457,393,131, 0,626,917,1341,1491,2974,3416, -,-,-,-,-,-,-, 691521 Satellite W-chromosome 585 chrUn_NT_470642v1 5170 8530 GGXHOI 413 + 5170 8530 0 4 2765,129,203,195, 0,2778,2928,3165, +,+,+,+, 691525 Satellite W-chromosome 585 chrUn_NT_470644v1 1345 2896 GGERVL-B-int 798 + 1345 2896 0 2 84,1466, 0,85, +,+, 691558 LTR ERVL 585 chrUn_NT_470644v1 3632 5023 GGLTR7-int 325 + 3632 5023 0 3 101,290,278, 0,127,1113, +,+,+, 691561 LTR ERV1 585 chrUn_NT_470645v1 5310 8484 GGXHOI 387 - 5310 8484 0 4 450,1027,1089,548, 0,470,1517,2626, -,-,-,-, 691564 Satellite W-chromosome 585 chrUn_NT_470649v1 1848 2020 (CCCAAT)n 334 + 1848 2020 0 2 19,102, 0,70, +,+, 691571 Simple_repeat Simple_repeat 585 chrUn_NT_470649v1 7816 8449 (CCTTG)n 558 + 7816 8449 0 2 127,171, 0,462, +,+, 691583 Simple_repeat Simple_repeat 585 chrUn_NT_470652v1 7543 7993 CR1-C2 821 + 7543 7993 0 2 80,285, 0,165, +,+, 691632 LINE CR1 585 chrUn_NT_470653v1 441 1880 GGXHOI 370 + 441 1880 0 2 815,562, 0,877, +,+, 691635 Satellite W-chromosome 585 chrUn_NT_470653v1 3461 8119 GGXHOI 349 + 3461 8119 0 6 356,2303,134,1439,185,170, 0,369,2687,2838,4292,4488, +,+,+,+,+,+, 691637 Satellite W-chromosome 585 chrUn_NT_470654v1 3346 8352 GGXHOI 424 + 3346 8352 0 8 358,434,989,64,428,983,1519,117, 0,378,825,1829,1916,2357,3355,4889, +,+,+,+,+,+,+,+, 691642 Satellite W-chromosome 585 chrUn_NT_470656v1 2290 3765 (CGAGG)n 519 + 2290 3765 0 3 446,233,589, 0,480,886, +,+,+, 691654 Simple_repeat Simple_repeat 585 chrUn_NT_470656v1 4127 4541 (CGAGG)n 468 + 4127 4541 0 2 206,180, 0,234, +,+, 691659 Simple_repeat Simple_repeat 585 chrUn_NT_470656v1 5854 6835 (CGAGG)n 535 + 5854 6835 0 4 350,177,183,182, 0,371,569,799, +,+,+,+, 691664 Simple_repeat Simple_repeat 585 chrUn_NT_470656v1 7021 7479 (CGAGG)n 598 + 7021 7479 0 2 180,215, 0,243, +,+, 691665 Simple_repeat Simple_repeat 585 chrUn_NT_470657v1 3409 8515 GGXHOI 406 - 3409 8515 0 2 1473,3615, 0,1491, -,-, 691670 Satellite W-chromosome 585 chrUn_NT_470658v1 5615 8080 GGXHOI 384 + 5615 8080 0 4 887,222,266,1042, 0,905,1139,1423, +,+,+,+, 691672 Satellite W-chromosome 585 chrUn_NT_470659v1 3490 6858 GGXHOI 401 - 3490 6858 0 4 2495,432,103,290, 0,2508,2960,3078, -,-,-,-, 691675 Satellite W-chromosome 585 chrUn_NT_470659v1 7004 8504 GGXHOI 378 - 7004 8504 0 3 489,424,555, 0,502,945, -,-,-, 691676 Satellite W-chromosome 585 chrUn_NT_470660v1 2161 3100 GGXHOI 369 - 2161 3100 0 2 548,375, 0,564, -,-, 691678 Satellite W-chromosome 585 chrUn_NT_470660v1 3213 4447 GGXHOI 343 - 3213 4447 0 2 725,491, 0,743, -,-, 691679 Satellite W-chromosome 585 chrUn_NT_470660v1 6609 8314 GGXHOI 350 - 6609 8314 0 2 463,1231, 0,474, -,-, 691683 Satellite W-chromosome 585 chrUn_NT_470661v1 7916 8506 GGXHOI 379 + 7916 8506 0 2 172,403, 0,187, +,+, 691695 Satellite W-chromosome 585 chrUn_NT_470662v1 706 6071 GGXHOI 387 + 706 6071 0 4 204,949,1312,2853, 0,220,1185,2512, +,+,+,+, 691697 Satellite W-chromosome 585 chrUn_NT_470662v1 6879 7324 GGXHOI 320 + 6879 7324 0 2 221,212, 0,233, +,+, 691699 Satellite W-chromosome 585 chrUn_NT_470666v1 3405 3654 CR1-X 521 - 3405 3654 0 2 78,171, 0,78, -,-, 691718 LINE CR1 585 chrUn_NT_470668v1 984 8372 GGXHOI 394 - 984 8372 0 5 299,2107,2505,2191,179, 0,360,2482,5003,7209, -,-,-,-,-, 691727 Satellite W-chromosome 585 chrUn_NT_470670v1 4239 4753 (ACCCCATAGGG)n 726 + 4239 4753 0 3 244,84,29, 0,244,485, +,+,+, 691733 Satellite Satellite 585 chrUn_NT_470670v1 4988 5277 (ACCCCATAGGG)n 538 + 4988 5277 0 2 129,39, 0,250, +,+, 691736 Satellite Satellite 585 chrUn_NT_470672v1 3063 4221 (CA)n 607 + 3063 4221 0 5 318,274,180,81,240, 0,333,624,820,918, +,+,+,+,+, 691752 Simple_repeat Simple_repeat 585 chrUn_NT_470674v1 7109 8500 GGLTR7-int 291 - 7109 8500 0 3 279,315,101, 0,973,1290, -,-,-, 691768 LTR ERV1 585 chrUn_NT_470675v1 896 2687 (TTAGGG)n 551 + 896 2687 0 6 363,168,185,528,52,129, 0,401,604,789,1492,1662, +,+,+,+,+,+, 691775 Simple_repeat Simple_repeat 585 chrUn_NT_470675v1 2795 3863 (TTAGGG)n 625 + 2795 3863 0 4 192,105,208,183, 0,192,659,885, +,+,+,+, 691779 Simple_repeat Simple_repeat 585 chrUn_NT_470675v1 5007 5811 (TTAGGG)n 536 + 5007 5811 0 3 356,187,216, 0,401,588, +,+,+, 691790 Simple_repeat Simple_repeat 585 chrUn_NT_470675v1 5844 6825 (TTAGGG)n 551 + 5844 6825 0 3 658,185,92, 0,685,889, +,+,+, 691792 Simple_repeat Simple_repeat 585 chrUn_NT_470675v1 7066 8036 (TTAGGG)n 643 + 7066 8036 0 3 220,208,542, 0,220,428, +,+,+, 691794 Simple_repeat Simple_repeat 585 chrUn_NT_470675v1 7915 8264 (TTAGGC)n 450 + 7915 8264 0 2 133,34, 0,315, +,+, 691795 Simple_repeat Simple_repeat 585 chrUn_NT_470678v1 6062 8471 GGXHOI 351 - 6062 8471 0 5 249,129,960,221,783, 0,266,413,1388,1626, -,-,-,-,-, 691808 Satellite W-chromosome 585 chrUn_NT_470679v1 639 880 CR1-F2 440 + 639 880 0 2 133,77, 0,164, +,+, 691811 LINE CR1 585 chrUn_NT_470681v1 2261 2955 CR1-B2 723 + 2261 2955 0 2 226,465, 0,229, +,+, 691839 LINE CR1 585 chrUn_NT_470681v1 8213 8490 CR1-X 492 + 8213 8490 0 2 171,106, 0,171, +,+, 691845 LINE CR1 585 chrUn_NT_470682v1 288 1181 GGXHOI 395 + 288 1181 0 2 639,207, 0,686, +,+, 691847 Satellite W-chromosome 585 chrUn_NT_470682v1 1606 2727 GGXHOI 426 + 1606 2727 0 3 621,133,292, 0,636,829, +,+,+, 691849 Satellite W-chromosome 585 chrUn_NT_470682v1 2823 4678 GGXHOI 411 + 2823 4678 0 6 468,231,133,284,284,379, 0,486,734,881,1177,1476, +,+,+,+,+,+, 691850 Satellite W-chromosome 585 chrUn_NT_470682v1 4800 5349 GGXHOI 397 + 4800 5349 0 2 184,342, 0,207, +,+, 691851 Satellite W-chromosome 585 chrUn_NT_470682v1 6325 8153 GGXHOI 380 + 6325 8153 0 4 211,571,304,685, 0,238,821,1143, +,+,+,+, 691854 Satellite W-chromosome 585 chrUn_NT_470684v1 856 1845 (ACCCATTGGG)n 396 + 856 1845 0 4 166,156,307,282, 0,166,375,707, +,+,+,+, 691867 Satellite Satellite 585 chrUn_NT_470684v1 4308 4565 (CTCTATGGGG)n 561 + 4308 4565 0 2 106,107, 0,150, +,+, 691869 Satellite Satellite 585 chrUn_NT_470684v1 4731 5173 (CTCTATGGGG)n 551 + 4731 5173 0 3 107,85,111, 0,134,331, +,+,+, 691870 Satellite Satellite 585 chrUn_NT_470688v1 3896 4409 (ACCCATTGGG)n 489 - 3896 4409 0 2 235,278, 0,235, -,-, 691891 Satellite Satellite 585 chrUn_NT_470688v1 4999 5292 (ACCCATAGGG)n 353 - 4999 5292 0 2 123,136, 0,157, -,-, 691894 Satellite Satellite 585 chrUn_NT_470690v1 4657 7145 GGXHOI 328 - 4657 7145 0 8 586,161,303,127,190,406,251,245, 0,634,846,1165,1335,1540,1960,2243, -,-,-,-,-,-,-,-, 691904 Satellite W-chromosome 585 chrUn_NT_470690v1 7226 8092 GGXHOI 395 - 7226 8092 0 3 345,344,134, 0,362,732, -,-,-, 691905 Satellite W-chromosome 585 chrUn_NT_470693v1 4994 5085 (TTCCTCA)n 374 + 4994 5085 0 2 15,40, 0,51, +,+, 691950 Simple_repeat Simple_repeat 585 chrUn_NT_470694v1 3058 4544 GGXHOI 360 + 3058 4544 0 2 1176,289, 0,1197, +,+, 691971 Satellite W-chromosome 585 chrUn_NT_470694v1 5506 6315 GGXHOI 397 - 5506 6315 0 2 465,300, 0,509, -,-, 691973 Satellite W-chromosome 585 chrUn_NT_470694v1 6761 8474 GGXHOI 400 - 6761 8474 0 3 685,396,593, 0,704,1120, -,-,-, 691975 Satellite W-chromosome 585 chrUn_NT_470695v1 1111 1331 (ACCCATAGGG)n 422 - 1111 1331 0 2 93,115, 0,105, -,-, 691979 Satellite Satellite 585 chrUn_NT_470695v1 1676 1933 (ACCCATAGGG)n 488 - 1676 1933 0 2 117,117, 0,140, -,-, 691981 Satellite Satellite 585 chrUn_NT_470695v1 2033 2409 (ACCCATAGGG)n 419 - 2033 2409 0 3 117,115,118, 0,130,258, -,-,-, 691982 Satellite Satellite 585 chrUn_NT_470695v1 2787 3556 (ACCCATAGGG)n 434 - 2787 3556 0 4 118,346,114,115, 0,130,489,654, -,-,-,-, 691984 Satellite Satellite 585 chrUn_NT_470695v1 3812 4084 (ACCCATAGGG)n 428 - 3812 4084 0 2 115,115, 0,157, -,-, 691986 Satellite Satellite 585 chrUn_NT_470695v1 4178 5001 (ACCCATAGGG)n 438 - 4178 5001 0 5 117,230,112,117,116, 0,140,422,577,707, -,-,-,-,-, 691987 Satellite Satellite 585 chrUn_NT_470695v1 5394 5950 (ACCCATAGGG)n 405 - 5394 5950 0 4 112,117,123,115, 0,145,285,441, -,-,-,-, 691989 Satellite Satellite 585 chrUn_NT_470695v1 6052 6463 (ACCCATAGGG)n 419 - 6052 6463 0 2 115,236, 0,175, -,-, 691990 Satellite Satellite 585 chrUn_NT_470698v1 3411 3834 GGLTR7B 285 - 3411 3834 0 2 316,105, 0,318, -,-, 692016 LTR ERV1 585 chrUn_NT_470698v1 4229 4472 (CTCTATGGGG)n 442 + 4229 4472 0 2 98,17, 0,226, +,+, 692017 Satellite Satellite 585 chrUn_NT_470698v1 4555 7307 GGERVL-B-int 671 - 4555 7307 0 3 2387,71,247, 0,2387,2505, -,-,-, 692019 LTR ERVL 585 chrUn_NT_470699v1 1745 5482 GGXHOI 351 - 1745 5482 0 7 474,413,1277,698,247,289,155, 0,499,952,2279,2991,3280,3582, -,-,-,-,-,-,-, 692030 Satellite W-chromosome 585 chrUn_NT_470699v1 5587 7484 GGXHOI 354 - 5587 7484 0 4 131,1009,393,287, 0,147,1197,1610, -,-,-,-, 692031 Satellite W-chromosome 585 chrUn_NT_470699v1 7554 8455 GGXHOI 357 - 7554 8455 0 4 134,444,139,139, 0,149,608,762, -,-,-,-, 692032 Satellite W-chromosome 585 chrUn_NT_470700v1 4121 8439 GGXHOI 395 - 4121 8439 0 7 652,762,465,388,1411,150,349, 0,711,1484,1961,2372,3807,3969, -,-,-,-,-,-,-, 692034 Satellite W-chromosome 585 chrUn_NT_470701v1 283 514 (ACCCATAGGG)n 366 - 283 514 0 2 110,98, 0,133, -,-, 692036 Satellite Satellite 585 chrUn_NT_470701v1 7884 7957 (G)n 951 + 7884 7957 0 2 21,17, 0,56, +,+, 692049 Simple_repeat Simple_repeat 585 chrUn_NT_470706v1 1976 3510 GGXHOI 455 - 1976 3510 0 3 841,447,224, 0,852,1310, -,-,-, 692075 Satellite W-chromosome 585 chrUn_NT_470706v1 3575 4312 GGXHOI 430 - 3575 4312 0 2 139,553, 0,184, -,-, 692076 Satellite W-chromosome 585 chrUn_NT_470706v1 4405 5915 GGXHOI 409 - 4405 5915 0 4 488,339,437,186, 0,512,869,1324, -,-,-,-, 692077 Satellite W-chromosome 585 chrUn_NT_470706v1 6005 7886 GGXHOI 430 - 6005 7886 0 5 396,225,594,392,190, 0,436,675,1288,1691, -,-,-,-,-, 692078 Satellite W-chromosome 585 chrUn_NT_470707v1 1184 7173 Z-REP 830 + 1184 7173 0 2 1728,4205, 0,1784, +,+, 692081 Satellite macro 585 chrUn_NT_470709v1 4097 4220 (G)n 979 + 4097 4220 0 2 49,19, 0,104, +,+, 692100 Simple_repeat Simple_repeat 585 chrUn_NT_470709v1 7151 8451 LSU-rRNA_Hsa 776 - 7151 8451 0 2 755,470, 0,830, -,-, 692119 rRNA rRNA 585 chrUn_NT_470710v1 7607 7900 CR1-X2 457 - 7607 7900 0 2 230,63, 0,230, -,-, 692126 LINE CR1 585 chrUn_NT_470711v1 396 2240 GGXHOI 343 - 396 2240 0 2 1032,750, 0,1094, -,-, 692128 Satellite W-chromosome 585 chrUn_NT_470711v1 2995 5185 GGXHOI 313 - 2995 5185 0 5 383,678,628,208,182, 0,400,1101,1743,2008, -,-,-,-,-, 692130 Satellite W-chromosome 585 chrUn_NT_470711v1 7498 8440 GGXHOI 373 - 7498 8440 0 2 597,287, 0,655, -,-, 692133 Satellite W-chromosome 585 chrUn_NT_470712v1 4780 6958 GGXHOI 357 + 4780 6958 0 2 1036,1080, 0,1098, +,+, 692139 Satellite W-chromosome 585 chrUn_NT_470714v1 387 2268 GGXHOI 481 + 387 2268 0 2 1185,675, 0,1206, +,+, 692153 Satellite W-chromosome 585 chrUn_NT_470714v1 2304 3626 GGXHOI 459 + 2304 3626 0 3 318,264,679, 0,356,643, +,+,+, 692155 Satellite W-chromosome 585 chrUn_NT_470714v1 3720 4988 GGXHOI 501 + 3720 4988 0 2 859,387, 0,881, +,+, 692157 Satellite W-chromosome 585 chrUn_NT_470714v1 5068 8179 GGXHOI 440 + 5068 8179 0 7 331,1347,219,151,326,378,169, 0,348,1717,1947,2141,2517,2942, +,+,+,+,+,+,+, 692158 Satellite W-chromosome 585 chrUn_NT_470715v1 2110 2508 (GGATG)n 685 + 2110 2508 0 2 188,174, 0,224, +,+, 692167 Simple_repeat Simple_repeat 585 chrUn_NT_470716v1 6954 8297 GGERVL-A-int 780 - 6954 8297 0 2 1287,56, 0,1287, -,-, 692192 LTR ERVL 585 chrUn_NT_470717v1 1099 1825 GGXHOI 373 - 1099 1825 0 2 310,397, 0,329, -,-, 692195 Satellite W-chromosome 585 chrUn_NT_470717v1 1903 8444 GGXHOI 330 - 1903 8444 0 2 233,6250, 0,291, -,-, 692196 Satellite W-chromosome 585 chrUn_NT_470719v1 7328 8444 GGXHOI 328 - 7328 8444 0 2 340,734, 0,382, -,-, 692205 Satellite W-chromosome 585 chrUn_NT_470721v1 603 1707 GGXHOI 301 - 603 1707 0 2 954,134, 0,970, -,-, 692208 Satellite W-chromosome 585 chrUn_NT_470721v1 3732 6369 GGXHOI 362 - 3732 6369 0 10 498,139,406,187,470,166,130,85,136,201, 0,539,694,1149,1354,1853,2035,2184,2286,2436, -,-,-,-,-,-,-,-,-,-, 692212 Satellite W-chromosome 585 chrUn_NT_470721v1 6676 7269 GGXHOI 301 - 6676 7269 0 3 133,279,129, 0,146,464, -,-,-, 692214 Satellite W-chromosome 585 chrUn_NT_470721v1 7349 8440 GGXHOI 371 - 7349 8440 0 2 597,468, 0,623, -,-, 692215 Satellite W-chromosome 585 chrUn_NT_470724v1 1820 6076 GGXHOI 394 - 1820 6076 0 6 1427,487,874,457,434,444, 0,1446,1991,2882,3361,3812, -,-,-,-,-,-, 692231 Satellite W-chromosome 585 chrUn_NT_470726v1 48 429 (CAAGG)n 558 + 48 429 0 2 177,180, 0,201, +,+, 692252 Simple_repeat Simple_repeat 585 chrUn_NT_470726v1 699 1337 (CCTTG)n 400 + 699 1337 0 4 62,189,233,76, 0,99,302,562, +,+,+,+, 692255 Simple_repeat Simple_repeat 585 chrUn_NT_470726v1 1414 1901 (CCTTG)n 474 + 1414 1901 0 2 251,236, 0,251, +,+, 692256 Simple_repeat Simple_repeat 585 chrUn_NT_470726v1 1951 2305 (GCCTG)n 298 + 1951 2305 0 2 84,246, 0,108, +,+, 692259 Simple_repeat Simple_repeat 585 chrUn_NT_470726v1 4360 5009 (CAAGG)n 529 + 4360 5009 0 2 374,251, 0,398, +,+, 692273 Simple_repeat Simple_repeat 585 chrUn_NT_470726v1 5007 5905 (CCTTG)n 486 + 5007 5905 0 3 301,18,55, 0,478,843, +,+,+, 692274 Simple_repeat Simple_repeat 585 chrUn_NT_470726v1 6527 7457 GGXHOI 345 + 6527 7457 0 3 383,254,193, 0,446,737, +,+,+, 692279 Satellite W-chromosome 585 chrUn_NT_470728v1 1527 3980 GGLTR7-int 609 + 1527 3980 0 3 334,853,784, 0,808,1669, +,+,+, 692291 LTR ERV1 585 chrUn_NT_470728v1 4162 6377 GGLTR10D-int 873 - 4162 6377 0 2 365,1847, 0,368, -,-, 692293 LTR ERVK 585 chrUn_NT_470728v1 7257 7891 (CGAGG)n 487 + 7257 7891 0 2 187,420, 0,214, +,+, 692298 Simple_repeat Simple_repeat 585 chrUn_NT_470729v1 1107 7370 GGXHOI 389 - 1107 7370 0 4 549,1512,1864,2271, 0,576,2104,3992, -,-,-,-, 692301 Satellite W-chromosome 585 chrUn_NT_470729v1 7467 8432 GGXHOI 356 - 7467 8432 0 2 172,776, 0,189, -,-, 692302 Satellite W-chromosome 585 chrUn_NT_470730v1 226 711 (GCCCCACAGCT)n 616 - 226 711 0 3 142,133,136, 0,157,349, -,-,-, 692304 Satellite Satellite 585 chrUn_NT_470730v1 5896 6504 (ACCCATAGGG)n 385 - 5896 6504 0 3 284,161,129, 0,307,479, -,-,-, 692320 Satellite Satellite 585 chrUn_NT_470730v1 6617 6959 (ACCCATAGGG)n 328 - 6617 6959 0 2 165,148, 0,194, -,-, 692321 Satellite Satellite 585 chrUn_NT_470732v1 1116 8289 GGLTR7A 831 + 1116 8289 0 3 301,6262,610, 0,301,6563, +,+,+, 692334 LTR ERV1 585 chrUn_NT_470733v1 154 959 (CGAGG)n 528 + 154 959 0 4 179,179,176,179, 0,196,425,626, +,+,+,+, 692337 Simple_repeat Simple_repeat 585 chrUn_NT_470733v1 4567 5817 (CGAGG)n 526 + 4567 5817 0 3 425,144,338, 0,444,912, +,+,+, 692346 Simple_repeat Simple_repeat 585 chrUn_NT_470733v1 6200 7117 (CGAGG)n 506 + 6200 7117 0 2 511,354, 0,563, +,+, 692351 Simple_repeat Simple_repeat 585 chrUn_NT_470734v1 5124 5798 (CTCTATGGGG)n 692 - 5124 5798 0 2 138,63, 0,611, -,-, 692368 Satellite Satellite 585 chrUn_NT_470735v1 1563 1879 GGXHOI 298 . 1563 1879 0 2 154,143, 0,173, +,-, 692381 Satellite W-chromosome 585 chrUn_NT_470735v1 1766 2281 Sat-CR1_GG 208 - 1766 2281 0 2 257,65, 0,450, -,-, 692382 Satellite Satellite 585 chrUn_NT_470735v1 3453 3769 GGXHOI 298 . 3453 3769 0 2 154,143, 0,173, +,-, 692386 Satellite W-chromosome 585 chrUn_NT_470735v1 3656 4171 Sat-CR1_GG 210 - 3656 4171 0 2 257,65, 0,450, -,-, 692387 Satellite Satellite 585 chrUn_NT_470735v1 5346 5662 GGXHOI 298 . 5346 5662 0 2 154,143, 0,173, +,-, 692391 Satellite W-chromosome 585 chrUn_NT_470735v1 5549 6060 Sat-CR1_GG 186 - 5549 6060 0 2 255,96, 0,415, -,-, 692392 Satellite Satellite 585 chrUn_NT_470738v1 1910 2206 (CTCTATGGGG)n 368 - 1910 2206 0 2 123,129, 0,167, -,-, 692412 Satellite Satellite 585 chrUn_NT_470740v1 3947 4388 GGXHOI 361 + 3947 4388 0 2 130,290, 0,151, +,+, 692421 Satellite W-chromosome 585 chrUn_NT_470740v1 5060 8092 GGXHOI 404 + 5060 8092 0 3 751,196,1986, 0,796,1046, +,+,+, 692423 Satellite W-chromosome 585 chrUn_NT_470742v1 4444 6870 GGLTR7-int 581 + 4444 6870 0 2 325,768, 0,1658, +,+, 692435 LTR ERV1 585 chrUn_NT_470742v1 7003 8418 GGLTR10D-int 949 - 7003 8418 0 2 364,1048, 0,367, -,-, 692439 LTR ERVK 585 chrUn_NT_470744v1 5501 6168 GGXHOI 594 - 5501 6168 0 2 18,335, 0,332, -,-, 692458 Satellite W-chromosome 585 chrUn_NT_470744v1 6210 8415 GGXHOI 571 - 6210 8415 0 3 427,1301,187, 0,706,2018, -,-,-, 692461 Satellite W-chromosome 585 chrUn_NT_470745v1 6167 6790 CR1-H 671 - 6167 6790 0 2 139,478, 0,145, -,-, 692467 LINE CR1 585 chrUn_NT_470746v1 6092 8406 GGXHOI 413 - 6092 8406 0 3 745,825,688, 0,784,1626, -,-,-, 692471 Satellite W-chromosome 585 chrUn_NT_470748v1 702 3378 GGERVL-B-int 740 + 702 3378 0 2 318,2357, 0,319, +,+, 692482 LTR ERVL 585 chrUn_NT_470748v1 3460 3705 (CTCTATGGGG)n 418 - 3460 3705 0 2 84,30, 0,215, -,-, 692483 Satellite Satellite 585 chrUn_NT_470748v1 4102 4474 GGLTR7B 299 + 4102 4474 0 2 106,240, 0,132, +,+, 692485 LTR ERV1 585 chrUn_NT_470750v1 1720 2237 (CATGC)n 522 + 1720 2237 0 2 138,200, 0,317, +,+, 692496 Simple_repeat Simple_repeat 585 chrUn_NT_470750v1 7586 7646 (GGAGGAT)n 382 + 7586 7646 0 2 11,14, 0,46, +,+, 692520 Simple_repeat Simple_repeat 585 chrUn_NT_470751v1 1041 1500 GGXHOI 325 + 1041 1500 0 2 309,130, 0,329, +,+, 692528 Satellite W-chromosome 585 chrUn_NT_470752v1 401 885 GGXHOI 398 + 401 885 0 2 271,158, 0,326, +,+, 692540 Satellite W-chromosome 585 chrUn_NT_470752v1 1982 3005 GGXHOI 411 + 1982 3005 0 2 194,814, 0,209, +,+, 692543 Satellite W-chromosome 585 chrUn_NT_470752v1 3237 4514 GGXHOI 394 + 3237 4514 0 2 410,852, 0,425, +,+, 692544 Satellite W-chromosome 585 chrUn_NT_470752v1 5586 7469 GGXHOI 402 + 5586 7469 0 3 614,1094,138, 0,629,1745, +,+,+, 692547 Satellite W-chromosome 585 chrUn_NT_470752v1 7533 7956 GGXHOI 400 + 7533 7956 0 2 222,181, 0,242, +,+, 692548 Satellite W-chromosome 585 chrUn_NT_470753v1 1195 1748 GGXHOI 304 + 1195 1748 0 2 400,142, 0,411, +,+, 692552 Satellite W-chromosome 585 chrUn_NT_470753v1 2431 6691 GGXHOI 365 + 2431 6691 0 3 273,2737,1213, 0,291,3047, +,+,+, 692554 Satellite W-chromosome 585 chrUn_NT_470754v1 874 4409 GGXHOI 438 - 874 4409 0 5 838,269,609,1501,246, 0,854,1138,1760,3289, -,-,-,-,-, 692557 Satellite W-chromosome 585 chrUn_NT_470754v1 4495 8383 GGXHOI 436 - 4495 8383 0 2 2459,1413, 0,2475, -,-, 692558 Satellite W-chromosome 585 chrUn_NT_470756v1 2110 2498 (ACCCATAGAG)n 695 + 2110 2498 0 2 215,135, 0,253, +,+, 692567 Satellite Satellite 585 chrUn_NT_470756v1 2472 2693 (ACCCATAGGG)n 536 + 2472 2693 0 2 88,14, 0,207, +,+, 692568 Satellite Satellite 585 chrUn_NT_470756v1 3105 3425 (ACCCATAGAG)n 706 + 3105 3425 0 2 95,103, 0,217, +,+, 692572 Satellite Satellite 585 chrUn_NT_470756v1 3624 3849 (ACCCATAGAG)n 628 + 3624 3849 0 2 83,28, 0,197, +,+, 692576 Satellite Satellite 585 chrUn_NT_470756v1 3971 4402 (ACCCATAGAG)n 690 + 3971 4402 0 2 248,66, 0,365, +,+, 692578 Satellite Satellite 585 chrUn_NT_470756v1 6193 6697 (ACCCATAGAG)n 666 - 6193 6697 0 3 150,102,141, 0,150,363, -,-,-, 692591 Satellite Satellite 585 chrUn_NT_470756v1 6919 7878 (ACCCATAGAG)n 658 + 6919 7878 0 5 229,226,117,120,168, 0,265,511,664,791, +,+,+,+,+, 692594 Satellite Satellite 585 chrUn_NT_470757v1 2080 7671 GGXHOI 341 + 2080 7671 0 5 599,2001,1412,985,412, 0,640,2699,4173,5179, +,+,+,+,+, 692597 Satellite W-chromosome 585 chrUn_NT_470758v1 3089 3426 (GGAGT)n 463 + 3089 3426 0 3 65,170,58, 0,97,279, +,+,+, 692607 Simple_repeat Simple_repeat 585 chrUn_NT_470759v1 3568 4672 GGXHOI 552 + 3568 4672 0 3 202,166,17, 0,600,1087, +,+,+, 692630 Satellite W-chromosome 585 chrUn_NT_470759v1 4741 5527 GGXHOI 578 + 4741 5527 0 2 202,332, 0,454, +,+, 692633 Satellite W-chromosome 585 chrUn_NT_470759v1 5906 6975 GGXHOI 520 + 5906 6975 0 2 740,131, 0,938, +,+, 692636 Satellite W-chromosome 585 chrUn_NT_470760v1 5749 8114 GGLTR7-int 236 - 5749 8114 0 4 96,352,290,239, 0,288,1284,2126, -,-,-,-, 692646 LTR ERV1 585 chrUn_NT_470762v1 3602 4717 GGXHOI 454 - 3602 4717 0 2 418,680, 0,435, -,-, 692651 Satellite W-chromosome 585 chrUn_NT_470762v1 5886 6920 GGXHOI 420 - 5886 6920 0 3 340,266,396, 0,354,638, -,-,-, 692653 Satellite W-chromosome 585 chrUn_NT_470762v1 7023 7702 GGXHOI 381 - 7023 7702 0 2 336,321, 0,358, -,-, 692654 Satellite W-chromosome 585 chrUn_NT_470763v1 513 2883 GGXHOI 551 + 513 2883 0 5 441,194,247,18,248, 0,889,1406,2092,2122, +,+,+,+,+, 692658 Satellite W-chromosome 585 chrUn_NT_470763v1 2927 3623 GGXHOI 498 + 2927 3623 0 2 215,411, 0,285, +,+, 692663 Satellite W-chromosome 585 chrUn_NT_470763v1 4950 8396 GGXHOI 538 + 4950 8396 0 6 450,220,249,233,256,214, 0,841,1342,2031,2528,3232, +,+,+,+,+,+, 692666 Satellite W-chromosome 585 chrUn_NT_470764v1 175 2422 CR1-F 545 + 175 2422 0 8 149,202,199,180,155,202,201,173, 0,200,444,922,1146,1587,1831,2074, +,+,+,+,+,+,+,+, 692673 LINE CR1 585 chrUn_NT_470764v1 2466 5457 CR1-F 562 + 2466 5457 0 10 176,190,200,203,203,204,155,201,188,180, 0,221,453,952,1197,1442,1913,2345,2583,2811, +,+,+,+,+,+,+,+,+,+, 692676 LINE CR1 585 chrUn_NT_470764v1 5501 8396 CR1-F 575 + 5501 8396 0 9 176,189,199,203,204,204,155,203,68, 0,221,452,946,1191,1437,1906,2351,2827, +,+,+,+,+,+,+,+,+, 692680 LINE CR1 585 chrUn_NT_470765v1 1803 2875 GGXHOI 482 - 1803 2875 0 2 17,732, 0,340, -,-, 692689 Satellite W-chromosome 585 chrUn_NT_470765v1 2944 8387 GGXHOI 524 - 2944 8387 0 6 1221,877,187,227,667,577, 0,1543,2743,3356,3905,4866, -,-,-,-,-,-, 692691 Satellite W-chromosome 585 chrUn_NT_470766v1 3380 3999 (CGAGG)n 530 + 3380 3999 0 2 359,84, 0,535, +,+, 692710 Simple_repeat Simple_repeat 585 chrUn_NT_470766v1 5294 6007 (CCTCG)n 510 + 5294 6007 0 2 256,280, 0,433, +,+, 692719 Simple_repeat Simple_repeat 585 chrUn_NT_470766v1 6454 7348 (CCTCG)n 511 + 6454 7348 0 4 189,247,344,81, 0,198,456,813, +,+,+,+, 692724 Simple_repeat Simple_repeat 585 chrUn_NT_470766v1 7395 7937 (CCTCG)n 461 + 7395 7937 0 2 110,423, 0,119, +,+, 692726 Simple_repeat Simple_repeat 585 chrUn_NT_470767v1 755 1378 (CAAGG)n 613 + 755 1378 0 3 204,194,225, 0,204,398, +,+,+, 692734 Simple_repeat Simple_repeat 585 chrUn_NT_470767v1 1689 4052 (CAAGG)n 624 + 1689 4052 0 7 180,259,324,70,488,88,570, 0,180,439,947,1028,1530,1793, +,+,+,+,+,+,+, 692738 Simple_repeat Simple_repeat 585 chrUn_NT_470767v1 4611 5165 (CAAGG)n 658 + 4611 5165 0 2 155,214, 0,340, +,+, 692746 Simple_repeat Simple_repeat 585 chrUn_NT_470767v1 4881 5225 (CAGGC)n 468 + 4881 5225 0 2 125,39, 0,305, +,+, 692748 Simple_repeat Simple_repeat 585 chrUn_NT_470770v1 1819 2897 (CGAGG)n 534 + 1819 2897 0 2 372,666, 0,412, +,+, 692785 Simple_repeat Simple_repeat 585 chrUn_NT_470770v1 2952 3972 (CGAGG)n 519 + 2952 3972 0 3 178,218,437, 0,227,583, +,+,+, 692787 Simple_repeat Simple_repeat 585 chrUn_NT_470770v1 4153 4862 (CGAGG)n 552 + 4153 4862 0 2 180,474, 0,235, +,+, 692790 Simple_repeat Simple_repeat 585 chrUn_NT_470770v1 7550 8260 (CGAGG)n 501 + 7550 8260 0 2 334,329, 0,381, +,+, 692802 Simple_repeat Simple_repeat 585 chrUn_NT_470772v1 1109 1375 (ACCCATAGGG)n 341 - 1109 1375 0 2 125,118, 0,148, -,-, 692807 Satellite Satellite 585 chrUn_NT_470772v1 1679 1947 (ACCCATAGGG)n 324 - 1679 1947 0 2 119,116, 0,152, -,-, 692808 Satellite Satellite 585 chrUn_NT_470772v1 2345 2654 (CTCTATGGGG)n 428 - 2345 2654 0 2 122,187, 0,122, -,-, 692813 Satellite Satellite 585 chrUn_NT_470772v1 2956 3334 (CTCTATGGGG)n 446 - 2956 3334 0 2 210,52, 0,326, -,-, 692816 Satellite Satellite 585 chrUn_NT_470772v1 3365 3620 (ACCCCATAGGG)n 336 - 3365 3620 0 2 72,136, 0,119, -,-, 692819 Satellite Satellite 585 chrUn_NT_470772v1 3978 4398 (ACCCCATAGGG)n 354 + 3978 4398 0 2 83,213, 0,207, +,+, 692824 Satellite Satellite 585 chrUn_NT_470772v1 4411 5039 (CTCTATGGGG)n 476 - 4411 5039 0 3 122,339,122, 0,143,506, -,-,-, 692826 Satellite Satellite 585 chrUn_NT_470773v1 4282 4874 GGXHOI 407 + 4282 4874 0 2 99,475, 0,117, +,+, 692834 Satellite W-chromosome 585 chrUn_NT_470773v1 5672 6340 GGXHOI 275 + 5672 6340 0 2 152,465, 0,203, +,+, 692836 Satellite W-chromosome 585 chrUn_NT_470773v1 6439 8344 GGXHOI 379 + 6439 8344 0 2 1398,492, 0,1413, +,+, 692837 Satellite W-chromosome 585 chrUn_NT_470775v1 6980 7578 CR1-C2 744 + 6980 7578 0 2 172,237, 0,361, +,+, 692846 LINE CR1 585 chrUn_NT_470776v1 1197 3194 GGXHOI 372 - 1197 3194 0 3 1250,514,190, 0,1277,1807, -,-,-, 692853 Satellite W-chromosome 585 chrUn_NT_470776v1 3443 4176 GGXHOI 395 - 3443 4176 0 2 603,98, 0,635, -,-, 692854 Satellite W-chromosome 585 chrUn_NT_470776v1 4334 6574 GGXHOI 389 - 4334 6574 0 2 836,1388, 0,852, -,-, 692855 Satellite W-chromosome 585 chrUn_NT_470776v1 6599 8384 GGXHOI 376 - 6599 8384 0 3 1108,496,137, 0,1132,1648, -,-,-, 692857 Satellite W-chromosome 585 chrUn_NT_470777v1 902 4100 GGXHOI 536 + 902 4100 0 4 447,71,107,499, 0,1007,2537,2699, +,+,+,+, 692859 Satellite W-chromosome 585 chrUn_NT_470777v1 4143 6207 GGXHOI 480 + 4143 6207 0 3 68,664,979, 0,379,1085, +,+,+, 692863 Satellite W-chromosome 585 chrUn_NT_470777v1 5453 7919 Sat-CR1_GG 176 + 5453 7919 0 2 796,425, 0,2041, +,+, 692864 Satellite Satellite 585 chrUn_NT_470777v1 6249 7494 GGXHOI 584 + 6249 7494 0 2 647,280, 0,965, +,+, 692865 Satellite W-chromosome 585 chrUn_NT_470778v1 6287 7993 GGXHOI 394 + 6287 7993 0 2 752,918, 0,788, +,+, 692868 Satellite W-chromosome 585 chrUn_NT_470780v1 533 919 (CCCCATTGGG)n 327 - 533 919 0 3 117,116,102, 0,147,284, -,-,-, 692881 Satellite Satellite 585 chrUn_NT_470780v1 1254 1529 (CCCCATTGGG)n 276 - 1254 1529 0 2 114,119, 0,156, -,-, 692883 Satellite Satellite 585 chrUn_NT_470780v1 2756 2983 (CCCCATTGGG)n 308 + 2756 2983 0 2 35,77, 0,150, +,+, 692885 Satellite Satellite 585 chrUn_NT_470780v1 3949 4183 (CCCCATTGGG)n 308 + 3949 4183 0 2 91,12, 0,222, +,+, 692891 Satellite Satellite 585 chrUn_NT_470780v1 5367 5646 (ACCCCATAGGG)n 445 - 5367 5646 0 2 111,119, 0,160, -,-, 692899 Satellite Satellite 585 chrUn_NT_470782v1 788 2309 GGXHOI 387 - 788 2309 0 3 158,280,821, 0,220,700, -,-,-, 692903 Satellite W-chromosome 585 chrUn_NT_470782v1 2430 3978 GGXHOI 518 - 2430 3978 0 3 203,176,563, 0,486,985, -,-,-, 692906 Satellite W-chromosome 585 chrUn_NT_470782v1 4020 7241 GGXHOI 544 - 4020 7241 0 6 269,297,194,243,193,281, 0,626,1245,1874,2429,2940, -,-,-,-,-,-, 692910 Satellite W-chromosome 585 chrUn_NT_470782v1 7318 8378 GGXHOI 488 - 7318 8378 0 3 19,144,230, 0,328,830, -,-,-, 692916 Satellite W-chromosome 585 chrUn_NT_470783v1 1257 3451 GGXHOI 407 - 1257 3451 0 7 191,136,428,124,485,553,136, 0,226,379,823,987,1484,2058, -,-,-,-,-,-,-, 692920 Satellite W-chromosome 585 chrUn_NT_470783v1 5102 8358 GGXHOI 373 - 5102 8358 0 12 125,483,135,595,178,212,133,149,309,217,253,190, 0,146,643,837,1445,1638,1862,2044,2237,2562,2796,3066, -,-,-,-,-,-,-,-,-,-,-,-, 692924 Satellite W-chromosome 585 chrUn_NT_470784v1 589 2936 GGERV10_LTR 822 + 589 2936 0 2 40,38, 0,2309, +,+, 692930 LTR ERVL 585 chrUn_NT_470784v1 630 2769 GGLTR10D-int 877 + 630 2769 0 2 1773,364, 0,1775, +,+, 692931 LTR ERVK 585 chrUn_NT_470784v1 2948 5405 GGLTR7-int 593 - 2948 5405 0 2 793,339, 0,2118, -,-, 692932 LTR ERV1 585 chrUn_NT_470786v1 774 3538 GGXHOI 376 + 774 3538 0 5 343,1573,306,342,130, 0,360,1951,2269,2634, +,+,+,+,+, 692944 Satellite W-chromosome 585 chrUn_NT_470786v1 3780 6743 GGXHOI 360 + 3780 6743 0 5 179,985,394,503,825, 0,199,1203,1614,2138, +,+,+,+,+, 692945 Satellite W-chromosome 585 chrUn_NT_470787v1 1594 1865 (CCCCATTGGG)n 382 + 1594 1865 0 2 133,113, 0,158, +,+, 692951 Satellite Satellite 585 chrUn_NT_470787v1 7741 8111 (CATCC)n 504 + 7741 8111 0 2 178,177, 0,193, +,+, 692963 Simple_repeat Simple_repeat 585 chrUn_NT_470791v1 1003 2658 GGXHOI 389 - 1003 2658 0 3 384,133,1111, 0,397,544, -,-,-, 692979 Satellite W-chromosome 585 chrUn_NT_470791v1 2977 4354 GGXHOI 377 - 2977 4354 0 4 587,116,338,284, 0,601,739,1093, -,-,-,-, 692981 Satellite W-chromosome 585 chrUn_NT_470791v1 4455 5115 GGXHOI 467 - 4455 5115 0 2 300,339, 0,321, -,-, 692982 Satellite W-chromosome 585 chrUn_NT_470791v1 5454 7314 GGXHOI 442 - 5454 7314 0 2 1705,142, 0,1718, -,-, 692984 Satellite W-chromosome 585 chrUn_NT_470791v1 7754 8360 GGXHOI 385 - 7754 8360 0 2 342,239, 0,367, -,-, 692986 Satellite W-chromosome 585 chrUn_NT_470794v1 2748 3010 (CGAGG)n 471 + 2748 3010 0 2 178,57, 0,205, +,+, 692999 Simple_repeat Simple_repeat 585 chrUn_NT_470794v1 3096 3412 (CGAGG)n 443 + 3096 3412 0 2 119,183, 0,133, +,+, 693001 Simple_repeat Simple_repeat 585 chrUn_NT_470794v1 4410 6596 (CGAGG)n 515 + 4410 6596 0 6 157,305,183,549,531,39, 0,176,507,710,1434,2147, +,+,+,+,+,+, 693007 Simple_repeat Simple_repeat 585 chrUn_NT_470796v1 485 1288 (CAAGG)n 527 + 485 1288 0 4 93,185,96,201, 0,138,323,602, +,+,+,+, 693028 Simple_repeat Simple_repeat 585 chrUn_NT_470796v1 1353 2828 (CAAGG)n 607 + 1353 2828 0 6 99,36,194,114,63,552, 0,286,322,537,830,923, +,+,+,+,+,+, 693031 Simple_repeat Simple_repeat 585 chrUn_NT_470796v1 3478 4271 (CAAGG)n 604 + 3478 4271 0 2 145,369, 0,424, +,+, 693040 Simple_repeat Simple_repeat 585 chrUn_NT_470796v1 4624 5168 (CAAGG)n 656 + 4624 5168 0 3 94,21,95, 0,254,449, +,+,+, 693045 Simple_repeat Simple_repeat 585 chrUn_NT_470796v1 5250 5776 (CAAGG)n 630 + 5250 5776 0 2 210,143, 0,383, +,+, 693049 Simple_repeat Simple_repeat 585 chrUn_NT_470796v1 5800 6596 (CAAGG)n 590 + 5800 6596 0 3 124,60,411, 0,310,385, +,+,+, 693052 Simple_repeat Simple_repeat 585 chrUn_NT_470797v1 3264 4317 GGXHOI 332 - 3264 4317 0 2 387,648, 0,405, -,-, 693060 Satellite W-chromosome 585 chrUn_NT_470797v1 6344 7341 GGXHOI 360 - 6344 7341 0 2 575,380, 0,617, -,-, 693064 Satellite W-chromosome 585 chrUn_NT_470798v1 4189 8317 GGXHOI 403 - 4189 8317 0 3 2658,315,1081, 0,2673,3047, -,-,-, 693069 Satellite W-chromosome 585 chrUn_NT_470799v1 2633 5584 GGXHOI 385 - 2633 5584 0 2 717,2173, 0,778, -,-, 693073 Satellite W-chromosome 585 chrUn_NT_470799v1 5810 7053 GGXHOI 360 - 5810 7053 0 2 887,340, 0,903, -,-, 693074 Satellite W-chromosome 585 chrUn_NT_470800v1 1246 7767 GGXHOI 552 + 1246 7767 0 12 192,296,194,297,194,297,194,296,193,296,184,27, 0,484,1178,1694,2388,2904,3598,4115,4808,5323,6017,6494, +,+,+,+,+,+,+,+,+,+,+,+, 693081 Satellite W-chromosome 585 chrUn_NT_470805v1 1291 1546 GGLTR11 678 - 1291 1546 0 2 157,98, 0,157, -,-, 693122 LTR ERV1 585 chrUn_NT_470805v1 1546 2333 GGERVL-B-int 760 + 1546 2333 0 2 578,209, 0,578, +,+, 693123 LTR ERVL 585 chrUn_NT_470805v1 6640 6884 GGLTR11 686 - 6640 6884 0 2 146,98, 0,146, -,-, 693127 LTR ERV1 585 chrUn_NT_470805v1 6884 8355 GGERVL-B-int 748 + 6884 8355 0 3 573,232,620, 0,573,851, +,+,+, 693128 LTR ERVL 585 chrUn_NT_470807v1 1812 2255 GGXHOI 276 + 1812 2255 0 2 159,225, 0,218, +,+, 693139 Satellite W-chromosome 585 chrUn_NT_470807v1 3742 4487 GGXHOI 387 + 3742 4487 0 2 583,145, 0,600, +,+, 693143 Satellite W-chromosome 585 chrUn_NT_470807v1 7061 8315 GGXHOI 316 + 7061 8315 0 4 323,220,401,261, 0,346,579,993, +,+,+,+, 693149 Satellite W-chromosome 585 chrUn_NT_470808v1 4696 5488 CR1-F 266 + 4696 5488 0 2 215,563, 0,229, +,+, 693153 LINE CR1 585 chrUn_NT_470809v1 403 2731 ENS3-int 861 - 403 2731 0 3 926,910,491, 0,927,1837, -,-,-, 693155 LTR ERVL 585 chrUn_NT_470809v1 2728 4520 ENS3-int 881 - 2728 4520 0 2 901,891, 0,901, -,-, 693156 LTR ERVL 585 chrUn_NT_470814v1 6222 6680 (ACCCATAGGG)n 688 + 6222 6680 0 3 120,139,111, 0,120,347, +,+,+, 693177 Satellite Satellite 585 chrUn_NT_470814v1 6849 7367 (ACCCATAGGG)n 673 + 6849 7367 0 2 140,347, 0,171, +,+, 693180 Satellite Satellite 585 chrUn_NT_470814v1 7427 7861 (ACCCATAGGG)n 707 + 7427 7861 0 2 117,302, 0,132, +,+, 693183 Satellite Satellite 585 chrUn_NT_470815v1 7499 7582 (C)n 861 + 7499 7582 0 2 18,24, 0,59, +,+, 693193 Simple_repeat Simple_repeat 585 chrUn_NT_470816v1 4430 4712 (ACCCATAGGG)n 454 + 4430 4712 0 2 69,99, 0,183, +,+, 693210 Satellite Satellite 585 chrUn_NT_470816v1 4639 4893 (ACCCCATAGGG)n 596 - 4639 4893 0 2 118,17, 0,237, -,-, 693212 Satellite Satellite 585 chrUn_NT_470816v1 6113 6421 (ACCCATAGAG)n 726 - 6113 6421 0 2 160,30, 0,278, -,-, 693222 Satellite Satellite 585 chrUn_NT_470816v1 6483 6759 (ACCCCATAGGG)n 600 + 6483 6759 0 2 127,30, 0,246, +,+, 693225 Satellite Satellite 585 chrUn_NT_470816v1 6739 7484 (ACCCATAGAG)n 609 + 6739 7484 0 2 418,296, 0,449, +,+, 693228 Satellite Satellite 585 chrUn_NT_470816v1 7932 8350 (CTCTATGGGG)n 675 + 7932 8350 0 3 162,98,20, 0,162,398, +,+,+, 693231 Satellite Satellite 585 chrUn_NT_470820v1 85 1230 CR1-F 722 + 85 1230 0 2 350,270, 0,875, +,+, 693253 LINE CR1 585 chrUn_NT_470821v1 2350 4707 GGXHOI 356 - 2350 4707 0 2 1696,640, 0,1717, -,-, 693259 Satellite W-chromosome 585 chrUn_NT_470821v1 4754 5737 GGXHOI 397 - 4754 5737 0 2 453,484, 0,499, -,-, 693261 Satellite W-chromosome 585 chrUn_NT_470826v1 452 1645 (CGAGG)n 525 + 452 1645 0 3 438,175,517, 0,480,676, +,+,+, 693285 Simple_repeat Simple_repeat 585 chrUn_NT_470826v1 1977 2595 (CGAGG)n 586 + 1977 2595 0 3 184,182,178, 0,209,440, +,+,+, 693287 Simple_repeat Simple_repeat 585 chrUn_NT_470826v1 2635 3453 (CGAGG)n 526 + 2635 3453 0 3 91,228,138, 0,273,680, +,+,+, 693289 Simple_repeat Simple_repeat 585 chrUn_NT_470826v1 3573 4774 (CGAGG)n 529 + 3573 4774 0 2 661,529, 0,672, +,+, 693293 Simple_repeat Simple_repeat 585 chrUn_NT_470826v1 6014 6434 (CGAGG)n 574 + 6014 6434 0 2 186,178, 0,242, +,+, 693297 Simple_repeat Simple_repeat 585 chrUn_NT_470830v1 3481 8313 GGXHOI 321 - 3481 8313 0 7 895,568,134,1800,418,453,447, 0,911,1500,1657,3473,3917,4385, -,-,-,-,-,-,-, 693367 Satellite W-chromosome 585 chrUn_NT_470831v1 778 1894 GGXHOI 556 + 778 1894 0 3 186,223,16, 0,599,1100, +,+,+, 693370 Satellite W-chromosome 585 chrUn_NT_470831v1 1973 5210 GGXHOI 546 + 1973 5210 0 6 281,217,305,194,243,237, 0,600,1098,1801,2319,3000, +,+,+,+,+,+, 693373 Satellite W-chromosome 585 chrUn_NT_470831v1 5254 7325 GGXHOI 534 + 5254 7325 0 4 432,193,246,18, 0,872,1384,2053, +,+,+,+, 693380 Satellite W-chromosome 585 chrUn_NT_470832v1 5725 6299 GGXHOI 431 + 5725 6299 0 2 234,323, 0,251, +,+, 693389 Satellite W-chromosome 585 chrUn_NT_470832v1 6746 7228 GGXHOI 344 + 6746 7228 0 2 276,147, 0,335, +,+, 693390 Satellite W-chromosome 585 chrUn_NT_470832v1 7375 7903 GGXHOI 468 + 7375 7903 0 2 194,312, 0,216, +,+, 693391 Satellite W-chromosome 585 chrUn_NT_470834v1 5408 5501 CR1-E 653 + 5408 5501 0 2 49,44, 0,49, +,+, 693398 LINE CR1 585 chrUn_NT_470838v1 1069 2244 GGXHOI 380 - 1069 2244 0 2 870,290, 0,885, -,-, 693422 Satellite W-chromosome 585 chrUn_NT_470838v1 2364 2903 GGXHOI 338 - 2364 2903 0 2 158,330, 0,209, -,-, 693423 Satellite W-chromosome 585 chrUn_NT_470838v1 3142 6641 GGXHOI 377 - 3142 6641 0 7 393,135,208,384,1013,889,333, 0,412,561,780,1188,2221,3166, -,-,-,-,-,-,-, 693424 Satellite W-chromosome 585 chrUn_NT_470838v1 6806 7765 GGXHOI 379 - 6806 7765 0 3 284,476,137, 0,326,822, -,-,-, 693425 Satellite W-chromosome 585 chrUn_NT_470841v1 1187 6678 GGXHOI 364 + 1187 6678 0 2 2228,3221, 0,2270, +,+, 693436 Satellite W-chromosome 585 chrUn_NT_470842v1 2331 7604 GGXHOI 459 - 2331 7604 0 8 2408,420,155,103,258,433,1192,134, 0,2426,2862,3033,3158,3429,3886,5139, -,-,-,-,-,-,-,-, 693442 Satellite W-chromosome 585 chrUn_NT_470842v1 7723 8314 GGXHOI 336 - 7723 8314 0 2 285,256, 0,335, -,-, 693443 Satellite W-chromosome 585 chrUn_NT_470843v1 2702 3811 GGXHOI 421 - 2702 3811 0 2 733,357, 0,752, -,-, 693445 Satellite W-chromosome 585 chrUn_NT_470843v1 3926 8310 GGXHOI 380 - 3926 8310 0 8 1027,131,377,136,1166,875,135,342, 0,1045,1227,1629,1783,2972,3891,4042, -,-,-,-,-,-,-,-, 693446 Satellite W-chromosome 585 chrUn_NT_470844v1 6842 7255 GGERVK10-int 341 - 6842 7255 0 2 134,106, 0,307, -,-, 693450 LTR ERVK 585 chrUn_NT_470847v1 3148 8310 GGXHOI 349 - 3148 8310 0 8 1405,285,291,2092,223,177,341,116, 0,1425,1745,2077,4231,4470,4665,5046, -,-,-,-,-,-,-,-, 693488 Satellite W-chromosome 585 chrUn_NT_470848v1 6310 7327 GGXHOI 328 + 6310 7327 0 3 595,127,238, 0,616,779, +,+,+, 693497 Satellite W-chromosome 585 chrUn_NT_470848v1 7625 8264 GGXHOI 316 + 7625 8264 0 2 334,258, 0,381, +,+, 693498 Satellite W-chromosome 585 chrUn_NT_470849v1 2257 2489 (AACAACGGA)n 888 + 2257 2489 0 2 103,78, 0,154, +,+, 693505 Simple_repeat Simple_repeat 585 chrUn_NT_470849v1 2809 2952 (AACAACGGA)n 934 + 2809 2952 0 2 42,48, 0,95, +,+, 693509 Simple_repeat Simple_repeat 585 chrUn_NT_470851v1 1758 4017 GGXHOI 349 + 1758 4017 0 2 1246,995, 0,1264, +,+, 693531 Satellite W-chromosome 585 chrUn_NT_470851v1 4092 6680 GGXHOI 401 + 4092 6680 0 4 643,386,1320,149, 0,701,1103,2439, +,+,+,+, 693532 Satellite W-chromosome 585 chrUn_NT_470851v1 6764 8224 GGXHOI 365 + 6764 8224 0 3 327,955,144, 0,343,1316, +,+,+, 693533 Satellite W-chromosome 585 chrUn_NT_470852v1 4513 5101 GGXHOI 355 + 4513 5101 0 2 415,161, 0,427, +,+, 693538 Satellite W-chromosome 585 chrUn_NT_470852v1 5171 5900 GGXHOI 309 + 5171 5900 0 3 120,182,361, 0,137,368, +,+,+, 693539 Satellite W-chromosome 585 chrUn_NT_470852v1 6102 7508 GGXHOI 403 + 6102 7508 0 2 1194,150, 0,1256, +,+, 693540 Satellite W-chromosome 585 chrUn_NT_470853v1 1164 2750 GGXHOI 360 - 1164 2750 0 7 133,139,125,278,457,143,141, 0,181,336,474,800,1268,1445, -,-,-,-,-,-,-, 693543 Satellite W-chromosome 585 chrUn_NT_470853v1 2818 6570 GGXHOI 387 - 2818 6570 0 9 311,695,398,145,891,211,464,292,124, 0,326,1075,1488,1681,2614,2841,3325,3628, -,-,-,-,-,-,-,-,-, 693544 Satellite W-chromosome 585 chrUn_NT_470853v1 6646 8303 GGXHOI 377 - 6646 8303 0 3 136,133,1284, 0,190,373, -,-,-, 693545 Satellite W-chromosome 585 chrUn_NT_470855v1 4300 8192 GGXHOI 358 - 4300 8192 0 5 596,148,1589,1124,326, 0,625,818,2424,3566, -,-,-,-,-, 693555 Satellite W-chromosome 585 chrUn_NT_470856v1 1280 2921 GGXHOI 399 + 1280 2921 0 2 1268,353, 0,1288, +,+, 693558 Satellite W-chromosome 585 chrUn_NT_470856v1 2986 4902 GGXHOI 405 + 2986 4902 0 3 635,395,849, 0,653,1067, +,+,+, 693559 Satellite W-chromosome 585 chrUn_NT_470856v1 4968 6687 GGXHOI 390 + 4968 6687 0 5 176,676,354,225,206, 0,214,905,1274,1513, +,+,+,+,+, 693560 Satellite W-chromosome 585 chrUn_NT_470857v1 4517 5050 A-rich 454 + 4517 5050 0 2 90,381, 0,152, +,+, 693575 Low_complexity Low_complexity 585 chrUn_NT_470858v1 8154 8286 (CCCTC)n 506 + 8154 8286 0 2 85,13, 0,119, +,+, 693591 Simple_repeat Simple_repeat 585 chrUn_NT_470861v1 1972 3514 GGXHOI 377 + 1972 3514 0 2 470,1009, 0,533, +,+, 693607 Satellite W-chromosome 585 chrUn_NT_470861v1 5878 7869 GGXHOI 378 + 5878 7869 0 2 842,1086, 0,905, +,+, 693610 Satellite W-chromosome 585 chrUn_NT_470865v1 2021 4143 GGXHOI 321 + 2021 4143 0 3 211,1153,691, 0,263,1431, +,+,+, 693623 Satellite W-chromosome 585 chrUn_NT_470865v1 4229 6679 GGXHOI 355 + 4229 6679 0 3 1219,704,459, 0,1271,1991, +,+,+, 693624 Satellite W-chromosome 585 chrUn_NT_470865v1 6815 8287 GGXHOI 337 + 6815 8287 0 2 840,599, 0,873, +,+, 693625 Satellite W-chromosome 585 chrUn_NT_470870v1 5197 8224 GGXHOI 391 - 5197 8224 0 4 769,354,262,1580, 0,787,1163,1447, -,-,-,-, 693662 Satellite W-chromosome 585 chrUn_NT_470872v1 2218 3077 (CAAGG)n 487 + 2218 3077 0 3 170,446,187, 0,185,672, +,+,+, 693677 Simple_repeat Simple_repeat 585 chrUn_NT_470872v1 3841 4171 (CCTTG)n 506 + 3841 4171 0 2 112,49, 0,281, +,+, 693681 Simple_repeat Simple_repeat 585 chrUn_NT_470872v1 4552 5009 (CCTTG)n 518 + 4552 5009 0 2 180,225, 0,232, +,+, 693685 Simple_repeat Simple_repeat 585 chrUn_NT_470872v1 5331 6190 (CAAGG)n 449 + 5331 6190 0 4 122,196,290,189, 0,142,353,670, +,+,+,+, 693686 Simple_repeat Simple_repeat 585 chrUn_NT_470872v1 6631 6976 (CCTTG)n 469 + 6631 6976 0 2 171,157, 0,188, +,+, 693688 Simple_repeat Simple_repeat 585 chrUn_NT_470872v1 7213 7737 (CCTTG)n 464 + 7213 7737 0 2 193,152, 0,372, +,+, 693690 Simple_repeat Simple_repeat 585 chrUn_NT_470873v1 7655 7787 G-rich 560 + 7655 7787 0 2 51,37, 0,95, +,+, 693714 Low_complexity Low_complexity 585 chrUn_NT_470874v1 7102 7585 GGERVL-A-int 697 - 7102 7585 0 2 427,56, 0,427, -,-, 693720 LTR ERVL 585 chrUn_NT_470874v1 7641 8239 (CCCCATTGGG)n 411 + 7641 8239 0 4 113,120,112,196, 0,133,276,402, +,+,+,+, 693721 Satellite Satellite 585 chrUn_NT_470876v1 902 2981 GGXHOI 430 - 902 2981 0 2 1158,868, 0,1211, -,-, 693735 Satellite W-chromosome 585 chrUn_NT_470876v1 3055 8273 GGXHOI 408 - 3055 8273 0 5 769,1571,611,1895,299, 0,791,2378,3013,4919, -,-,-,-,-, 693736 Satellite W-chromosome 585 chrUn_NT_470879v1 2565 2709 G-rich 564 + 2565 2709 0 2 38,57, 0,87, +,+, 693770 Low_complexity Low_complexity 585 chrUn_NT_470880v1 310 739 (ACCCATAGGG)n 660 + 310 739 0 3 39,21,20, 0,270,409, +,+,+, 693777 Satellite Satellite 585 chrUn_NT_470880v1 349 572 (ACCCATAGAG)n 550 + 349 572 0 2 91,132, 0,91, +,+, 693778 Satellite Satellite 585 chrUn_NT_470880v1 863 1214 (ACCCATAGAG)n 728 + 863 1214 0 2 57,180, 0,171, +,+, 693780 Satellite Satellite 585 chrUn_NT_470880v1 1298 1774 (ACCCATAGAG)n 758 + 1298 1774 0 2 338,54, 0,422, +,+, 693782 Satellite Satellite 585 chrUn_NT_470880v1 1878 2261 (ACCCATAGAG)n 784 + 1878 2261 0 2 233,148, 0,235, +,+, 693784 Satellite Satellite 585 chrUn_NT_470880v1 2355 2845 (ACCCATAGAG)n 740 + 2355 2845 0 2 177,192, 0,298, +,+, 693785 Satellite Satellite 585 chrUn_NT_470880v1 2939 3850 (ACCCATAGAG)n 724 + 2939 3850 0 3 235,161,40, 0,235,871, +,+,+, 693787 Satellite Satellite 585 chrUn_NT_470880v1 3997 4384 (ACCCATAGAG)n 719 + 3997 4384 0 3 122,115,29, 0,122,358, +,+,+, 693794 Satellite Satellite 585 chrUn_NT_470881v1 3733 4645 GGXHOI 404 + 3733 4645 0 4 166,132,255,273, 0,185,351,639, +,+,+,+, 693799 Satellite W-chromosome 585 chrUn_NT_470881v1 4728 8272 GGXHOI 406 + 4728 8272 0 5 2280,144,151,287,617, 0,2297,2463,2629,2927, +,+,+,+,+, 693800 Satellite W-chromosome 585 chrUn_NT_470883v1 1100 2080 GGXHOI 379 + 1100 2080 0 2 630,333, 0,647, +,+, 693809 Satellite W-chromosome 585 chrUn_NT_470883v1 2164 3180 GGXHOI 419 + 2164 3180 0 2 138,859, 0,157, +,+, 693810 Satellite W-chromosome 585 chrUn_NT_470883v1 3322 5903 GGXHOI 380 + 3322 5903 0 3 271,1720,539, 0,289,2042, +,+,+, 693811 Satellite W-chromosome 585 chrUn_NT_470883v1 6202 6989 GGXHOI 305 + 6202 6989 0 2 435,289, 0,498, +,+, 693812 Satellite W-chromosome 585 chrUn_NT_470883v1 7161 8244 GGXHOI 328 + 7161 8244 0 2 791,242, 0,841, +,+, 693813 Satellite W-chromosome 585 chrUn_NT_470884v1 5398 7806 Z-REP 751 + 5398 7806 0 2 153,1510, 0,898, +,+, 693816 Satellite macro 585 chrUn_NT_470885v1 4779 8218 GGXHOI 392 - 4779 8218 0 2 1739,1654, 0,1785, -,-, 693819 Satellite W-chromosome 585 chrUn_NT_470887v1 4761 8257 GGXHOI 401 - 4761 8257 0 6 768,647,387,1057,151,379, 0,786,1480,1883,2955,3117, -,-,-,-,-,-, 693839 Satellite W-chromosome 585 chrUn_NT_470888v1 585 1750 (CGAGG)n 331 + 585 1750 0 2 923,186, 0,979, +,+, 693842 Simple_repeat Simple_repeat 585 chrUn_NT_470888v1 2136 3072 (CGAGG)n 507 + 2136 3072 0 2 573,302, 0,634, +,+, 693845 Simple_repeat Simple_repeat 585 chrUn_NT_470888v1 3767 4140 (CGAGG)n 471 + 3767 4140 0 2 174,178, 0,195, +,+, 693849 Simple_repeat Simple_repeat 585 chrUn_NT_470888v1 4220 4556 (CGAGG)n 548 + 4220 4556 0 2 142,15, 0,321, +,+, 693850 Simple_repeat Simple_repeat 585 chrUn_NT_470888v1 5101 5652 (CGAGG)n 527 + 5101 5652 0 2 181,356, 0,195, +,+, 693854 Simple_repeat Simple_repeat 585 chrUn_NT_470889v1 2642 2759 G-rich 493 + 2642 2759 0 2 36,50, 0,67, +,+, 693864 Low_complexity Low_complexity 585 chrUn_NT_470890v1 1897 2652 CR1-F 278 - 1897 2652 0 2 549,206, 0,549, -,-, 693868 LINE CR1 585 chrUn_NT_470892v1 2776 3344 GGXHOI 364 - 2776 3344 0 4 103,119,143,136, 0,118,249,432, -,-,-,-, 693891 Satellite W-chromosome 585 chrUn_NT_470892v1 3552 4397 GGXHOI 392 - 3552 4397 0 4 172,138,137,294, 0,220,402,551, -,-,-,-, 693892 Satellite W-chromosome 585 chrUn_NT_470892v1 4462 6220 GGXHOI 346 - 4462 6220 0 5 534,134,607,135,190, 0,570,748,1373,1568, -,-,-,-,-, 693893 Satellite W-chromosome 585 chrUn_NT_470893v1 2750 5934 GGLTR7A 790 - 2750 5934 0 2 586,2590, 0,594, -,-, 693900 LTR ERV1 585 chrUn_NT_470893v1 5932 6615 GGLTR7A 796 + 5932 6615 0 2 88,587, 0,96, +,+, 693901 LTR ERV1 585 chrUn_NT_470895v1 607 3293 GGERVL-B-int 737 + 607 3293 0 3 208,1276,941, 0,469,1745, +,+,+, 693905 LTR ERVL 585 chrUn_NT_470895v1 3378 3630 (CTCTATGGGG)n 412 - 3378 3630 0 2 75,61, 0,191, -,-, 693906 Satellite Satellite 585 chrUn_NT_470895v1 4134 5394 GGLTR7-int 290 + 4134 5394 0 2 286,280, 0,980, +,+, 693908 LTR ERV1 585 chrUn_NT_470901v1 854 1362 (ACCCCATAGGG)n 516 + 854 1362 0 2 263,105, 0,403, +,+, 693954 Satellite Satellite 585 chrUn_NT_470901v1 2732 3213 (ACCCCATAGGG)n 634 + 2732 3213 0 3 162,146,164, 0,162,317, +,+,+, 693959 Satellite Satellite 585 chrUn_NT_470901v1 4268 5066 (ACCCATTGGG)n 530 + 4268 5066 0 3 118,418,239, 0,129,559, +,+,+, 693962 Satellite Satellite 585 chrUn_NT_470901v1 5097 7199 (ACCCATTGGG)n 487 + 5097 7199 0 5 138,119,128,1383,238, 0,180,310,459,1864, +,+,+,+,+, 693964 Satellite Satellite 585 chrUn_NT_470901v1 7202 7579 (ACCCATTGGG)n 542 - 7202 7579 0 2 201,70, 0,307, -,-, 693965 Satellite Satellite 585 chrUn_NT_470902v1 223 844 CR1-H 386 - 223 844 0 2 378,207, 0,414, -,-, 693969 LINE CR1 585 chrUn_NT_470902v1 2724 3348 CR1-H 378 - 2724 3348 0 2 379,209, 0,415, -,-, 693972 LINE CR1 585 chrUn_NT_470902v1 5229 5853 CR1-H 378 - 5229 5853 0 2 379,209, 0,415, -,-, 693975 LINE CR1 585 chrUn_NT_470908v1 1636 1984 GGERV10_LTR 513 - 1636 1984 0 2 143,53, 0,295, -,-, 694037 LTR ERVL 585 chrUn_NT_470909v1 1709 2460 GGXHOI 407 - 1709 2460 0 2 264,470, 0,281, -,-, 694047 Satellite W-chromosome 585 chrUn_NT_470909v1 2680 5348 GGXHOI 353 - 2680 5348 0 2 1991,661, 0,2007, -,-, 694048 Satellite W-chromosome 585 chrUn_NT_470909v1 5533 6027 GGXHOI 416 - 5533 6027 0 2 331,146, 0,348, -,-, 694049 Satellite W-chromosome 585 chrUn_NT_470909v1 6207 8027 GGXHOI 427 - 6207 8027 0 3 480,1014,288, 0,496,1532, -,-,-, 694050 Satellite W-chromosome 585 chrUn_NT_470910v1 1406 2412 GGXHOI 336 + 1406 2412 0 2 466,479, 0,527, +,+, 694053 Satellite W-chromosome 585 chrUn_NT_470910v1 5944 7559 GGXHOI 383 + 5944 7559 0 2 472,1080, 0,535, +,+, 694059 Satellite W-chromosome 585 chrUn_NT_470912v1 562 2348 GGXHOI 420 - 562 2348 0 4 154,573,170,790, 0,171,789,996, -,-,-,-, 694063 Satellite W-chromosome 585 chrUn_NT_470912v1 2789 4401 GGXHOI 375 - 2789 4401 0 4 231,442,464,356, 0,246,738,1256, -,-,-,-, 694064 Satellite W-chromosome 585 chrUn_NT_470912v1 4524 6109 GGXHOI 433 - 4524 6109 0 3 1200,152,167, 0,1220,1418, -,-,-, 694065 Satellite W-chromosome 585 chrUn_NT_470913v1 1191 2632 (TTAGGG)n 642 + 1191 2632 0 5 320,180,389,35,99, 0,346,546,961,1342, +,+,+,+,+, 694072 Simple_repeat Simple_repeat 585 chrUn_NT_470913v1 2721 3570 (TTAGGG)n 647 + 2721 3570 0 4 182,182,208,181, 0,244,448,668, +,+,+,+, 694075 Simple_repeat Simple_repeat 585 chrUn_NT_470913v1 3486 3807 (TTAGGC)n 430 + 3486 3807 0 2 108,35, 0,286, +,+, 694076 Simple_repeat Simple_repeat 585 chrUn_NT_470913v1 3802 4641 (TTAGGG)n 561 + 3802 4641 0 3 378,190,259, 0,390,580, +,+,+, 694078 Simple_repeat Simple_repeat 585 chrUn_NT_470913v1 4640 5608 (CCCTAA)n 719 + 4640 5608 0 3 315,344,286, 0,326,682, +,+,+, 694079 Simple_repeat Simple_repeat 585 chrUn_NT_470913v1 5888 6506 (CCCTAA)n 630 + 5888 6506 0 3 183,177,72, 0,219,546, +,+,+, 694083 Simple_repeat Simple_repeat 585 chrUn_NT_470913v1 7681 8172 (CCCTAA)n 665 + 7681 8172 0 2 177,303, 0,188, +,+, 694089 Simple_repeat Simple_repeat 585 chrUn_NT_470914v1 3165 3817 CR1-Y2_Aves 167 + 3165 3817 0 2 302,329, 0,323, +,+, 694092 LINE CR1 585 chrUn_NT_470916v1 4410 8231 GGLTR7-int 790 + 4410 8231 0 4 53,46,1274,292, 0,64,2255,3529, +,+,+,+, 694101 LTR ERV1 585 chrUn_NT_470917v1 3098 3460 (GCCCCACAGCT)n 483 - 3098 3460 0 3 122,98,21, 0,122,341, -,-,-, 694116 Satellite Satellite 585 chrUn_NT_470917v1 3870 4377 (ACCCATAGAG)n 654 + 3870 4377 0 2 195,196, 0,311, +,+, 694119 Satellite Satellite 585 chrUn_NT_470917v1 4065 4584 (ACCCATAGGG)n 586 + 4065 4584 0 4 116,123,115,142, 0,139,262,377, +,+,+,+, 694120 Satellite Satellite 585 chrUn_NT_470917v1 4418 4775 (CTCTATGGGG)n 506 - 4418 4775 0 2 80,52, 0,305, -,-, 694121 Satellite Satellite 585 chrUn_NT_470917v1 4726 5175 (ACCCATAGGG)n 556 + 4726 5175 0 2 235,93, 0,356, +,+, 694124 Satellite Satellite 585 chrUn_NT_470918v1 3327 3948 CR1-H 674 - 3327 3948 0 2 139,476, 0,145, -,-, 694131 LINE CR1 585 chrUn_NT_470918v1 6078 7347 CR1-H 601 - 6078 7347 0 2 116,1153, 0,116, -,-, 694135 LINE CR1 585 chrUn_NT_470919v1 3133 8103 GGXHOI 460 - 3133 8103 0 4 1606,228,2685,349, 0,1622,1905,4621, -,-,-,-, 694138 Satellite W-chromosome 585 chrUn_NT_470920v1 1141 2874 GGXHOI 407 - 1141 2874 0 2 138,1578, 0,155, -,-, 694142 Satellite W-chromosome 585 chrUn_NT_470920v1 2940 3493 GGXHOI 364 - 2940 3493 0 2 194,348, 0,205, -,-, 694143 Satellite W-chromosome 585 chrUn_NT_470920v1 4106 5480 GGXHOI 445 - 4106 5480 0 2 1211,128, 0,1246, -,-, 694145 Satellite W-chromosome 585 chrUn_NT_470920v1 6790 8178 GGXHOI 377 - 6790 8178 0 4 339,292,144,495, 0,389,699,893, -,-,-,-, 694147 Satellite W-chromosome 585 chrUn_NT_470927v1 338 1385 GGXHOI 384 + 338 1385 0 2 469,515, 0,532, +,+, 694224 Satellite W-chromosome 585 chrUn_NT_470927v1 2055 4172 GGXHOI 384 + 2055 4172 0 2 1045,1009, 0,1108, +,+, 694226 Satellite W-chromosome 585 chrUn_NT_470927v1 4237 4949 GGXHOI 313 + 4237 4949 0 3 196,131,328, 0,218,384, +,+,+, 694227 Satellite W-chromosome 585 chrUn_NT_470927v1 5117 5429 GGXHOI 387 + 5117 5429 0 2 78,206, 0,106, +,+, 694228 Satellite W-chromosome 585 chrUn_NT_470927v1 5528 6742 GGXHOI 370 + 5528 6742 0 2 336,847, 0,367, +,+, 694229 Satellite W-chromosome 585 chrUn_NT_470928v1 3279 3627 (CACTC)n 301 + 3279 3627 0 2 134,188, 0,160, +,+, 694242 Simple_repeat Simple_repeat 585 chrUn_NT_470928v1 3899 7266 GGLTR10D 947 - 3899 7266 0 3 340,2681,346, 0,340,3021, -,-,-, 694243 LTR ERVK 585 chrUn_NT_470930v1 303 863 (CCTTG)n 531 + 303 863 0 3 177,126,137, 0,177,423, +,+,+, 694253 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 1022 1341 (GCCTG)n 400 + 1022 1341 0 2 97,43, 0,276, +,+, 694255 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 1392 1720 (CAGGC)n 321 + 1392 1720 0 2 227,85, 0,243, +,+, 694257 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 1720 2125 (CAAGG)n 523 + 1720 2125 0 3 46,77,191, 0,137,214, +,+,+, 694258 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 2181 3233 (CCTTG)n 501 + 2181 3233 0 3 130,501,354, 0,147,698, +,+,+, 694260 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 5138 5465 (CAGGC)n 314 + 5138 5465 0 2 184,82, 0,245, +,+, 694268 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 5465 5873 (CAAGG)n 553 + 5465 5873 0 3 46,80,177, 0,138,231, +,+,+, 694269 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 7279 7619 (CAAGG)n 510 + 7279 7619 0 2 149,191, 0,149, +,+, 694276 Simple_repeat Simple_repeat 585 chrUn_NT_470930v1 7680 8207 (CCTTG)n 554 + 7680 8207 0 2 140,85, 0,442, +,+, 694277 Simple_repeat Simple_repeat 585 chrUn_NT_470933v1 5015 5253 CR1-X 466 - 5015 5253 0 2 77,161, 0,77, -,-, 694285 LINE CR1 585 chrUn_NT_470938v1 5185 5814 CR1-H 661 - 5185 5814 0 2 138,485, 0,144, -,-, 694346 LINE CR1 585 chrUn_NT_470939v1 6982 7531 CR1-D2 735 + 6982 7531 0 2 265,283, 0,266, +,+, 694358 LINE CR1 585 chrUn_NT_470939v1 7803 8210 CR1-F2 622 + 7803 8210 0 3 226,27,154, 0,226,253, +,+,+, 694359 LINE CR1 585 chrUn_NT_470940v1 116 1129 (CGAGG)n 508 + 116 1129 0 2 718,110, 0,903, +,+, 694361 Simple_repeat Simple_repeat 585 chrUn_NT_470940v1 1200 2256 (CGAGG)n 537 + 1200 2256 0 3 177,471,370, 0,179,686, +,+,+, 694364 Simple_repeat Simple_repeat 585 chrUn_NT_470940v1 2592 2976 (CGAGG)n 588 + 2592 2976 0 2 178,177, 0,207, +,+, 694368 Simple_repeat Simple_repeat 585 chrUn_NT_470940v1 3055 4861 (CGAGG)n 541 + 3055 4861 0 3 343,613,796, 0,358,1010, +,+,+, 694369 Simple_repeat Simple_repeat 585 chrUn_NT_470940v1 6653 7190 (CGAGG)n 472 + 6653 7190 0 2 341,37, 0,500, +,+, 694377 Simple_repeat Simple_repeat 585 chrUn_NT_470941v1 3326 8208 GGXHOI 557 - 3326 8208 0 7 410,50,363,460,589,151,140, 0,1082,1174,2211,3398,4027,4742, -,-,-,-,-,-,-, 694390 Satellite W-chromosome 585 chrUn_NT_470942v1 133 1694 CR1-F 559 + 133 1694 0 5 204,179,202,196,175, 0,246,671,915,1386, +,+,+,+,+, 694396 LINE CR1 585 chrUn_NT_470942v1 1738 4876 CR1-F 539 + 1738 4876 0 9 154,196,202,155,201,178,152,198,188, 0,436,674,1136,1580,2049,2270,2711,2950, +,+,+,+,+,+,+,+,+, 694399 LINE CR1 585 chrUn_NT_470942v1 5417 8153 CR1-F 471 + 5417 8153 0 9 201,205,202,150,202,200,192,149,204, 0,244,490,959,1154,1398,1638,2093,2532, +,+,+,+,+,+,+,+,+, 694407 LINE CR1 585 chrUn_NT_470943v1 2259 3049 (CAAGG)n 543 + 2259 3049 0 3 214,305,179, 0,270,611, +,+,+, 694417 Simple_repeat Simple_repeat 585 chrUn_NT_470943v1 3238 4273 (CCTTG)n 472 + 3238 4273 0 3 370,223,400, 0,398,635, +,+,+, 694420 Simple_repeat Simple_repeat 585 chrUn_NT_470943v1 5021 5670 (CAAGG)n 510 + 5021 5670 0 2 373,259, 0,390, +,+, 694425 Simple_repeat Simple_repeat 585 chrUn_NT_470943v1 5758 6018 (CCTTG)n 498 + 5758 6018 0 2 178,24, 0,236, +,+, 694426 Simple_repeat Simple_repeat 585 chrUn_NT_470943v1 6071 6717 (CCTTG)n 497 + 6071 6717 0 3 156,135,54, 0,175,592, +,+,+, 694428 Simple_repeat Simple_repeat 585 chrUn_NT_470944v1 6852 7140 (ACCCATAGGG)n 505 - 6852 7140 0 2 57,209, 0,79, -,-, 694444 Satellite Satellite 585 chrUn_NT_470944v1 7441 7854 (ACCCATAGGG)n 412 - 7441 7854 0 2 139,252, 0,161, -,-, 694449 Satellite Satellite 585 chrUn_NT_470945v1 2213 2963 GGXHOI 405 + 2213 2963 0 2 177,534, 0,216, +,+, 694454 Satellite W-chromosome 585 chrUn_NT_470945v1 3645 4907 GGXHOI 363 + 3645 4907 0 3 167,878,160, 0,187,1102, +,+,+, 694456 Satellite W-chromosome 585 chrUn_NT_470945v1 5114 5798 GGXHOI 311 + 5114 5798 0 2 485,162, 0,522, +,+, 694457 Satellite W-chromosome 585 chrUn_NT_470945v1 6256 7021 GGXHOI 382 + 6256 7021 0 2 304,434, 0,331, +,+, 694459 Satellite W-chromosome 585 chrUn_NT_470946v1 2405 3127 GGXHOI 316 + 2405 3127 0 2 300,387, 0,335, +,+, 694464 Satellite W-chromosome 585 chrUn_NT_470946v1 6142 7707 GGXHOI 373 + 6142 7707 0 3 666,541,247, 0,723,1318, +,+,+, 694472 Satellite W-chromosome 585 chrUn_NT_470947v1 4562 8168 GGXHOI 381 + 4562 8168 0 4 623,386,1855,688, 0,638,1044,2918, +,+,+,+, 694477 Satellite W-chromosome 585 chrUn_NT_470948v1 1814 3986 CR1-C 497 + 1814 3986 0 3 171,198,1543, 0,375,629, +,+,+, 694479 LINE CR1 585 chrUn_NT_470948v1 6220 8194 CR1-C2 674 + 6220 8194 0 2 1806,149, 0,1825, +,+, 694482 LINE CR1 585 chrUn_NT_470949v1 2109 5590 CR1-H 497 - 2109 5590 0 4 119,430,162,232, 0,134,3086,3249, -,-,-,-, 694485 LINE CR1 585 chrUn_NT_470949v1 7326 7400 (TTTGC)n 342 + 7326 7400 0 2 16,11, 0,63, +,+, 694489 Simple_repeat Simple_repeat 585 chrUn_NT_470950v1 495 811 (GCCTG)n 554 + 495 811 0 2 114,17, 0,299, +,+, 694497 Simple_repeat Simple_repeat 585 chrUn_NT_470950v1 808 1193 (CCTTG)n 624 + 808 1193 0 2 181,204, 0,181, +,+, 694499 Simple_repeat Simple_repeat 585 chrUn_NT_470950v1 1268 1970 (CCTTG)n 495 + 1268 1970 0 2 188,498, 0,204, +,+, 694501 Simple_repeat Simple_repeat 585 chrUn_NT_470950v1 2239 4060 (CCTTG)n 610 + 2239 4060 0 7 175,78,179,237,359,251,44, 0,390,504,683,951,1348,1777, +,+,+,+,+,+,+, 694505 Simple_repeat Simple_repeat 585 chrUn_NT_470950v1 4137 5923 (CCTTG)n 593 + 4137 5923 0 7 384,131,10,186,308,242,208, 0,425,744,765,1007,1336,1578, +,+,+,+,+,+,+, 694509 Simple_repeat Simple_repeat 585 chrUn_NT_470950v1 5959 7882 (CCTTG)n 594 + 5959 7882 0 7 246,202,210,185,148,187,185, 0,552,754,1013,1371,1519,1738, +,+,+,+,+,+,+, 694512 Simple_repeat Simple_repeat 585 chrUn_NT_470951v1 1789 2198 GA-rich 523 + 1789 2198 0 2 174,199, 0,210, +,+, 694522 Low_complexity Low_complexity 585 chrUn_NT_470952v1 5949 6179 (CTCTATGGGG)n 274 + 5949 6179 0 2 107,108, 0,122, +,+, 694553 Satellite Satellite 585 chrUn_NT_470954v1 7178 8162 GGXHOI 370 + 7178 8162 0 2 730,194, 0,790, +,+, 694576 Satellite W-chromosome 585 chrUn_NT_470955v1 4256 8188 GGERV28_I-int 111 + 4256 8188 0 3 130,1444,1745, 0,435,2187, +,+,+, 694578 LTR ERVK 585 chrUn_NT_470956v1 330 943 (ACCCCATAGGG)n 560 + 330 943 0 4 133,133,46,130, 0,191,379,483, +,+,+,+, 694580 Satellite Satellite 585 chrUn_NT_470956v1 1262 1763 (ACCCCATAGGG)n 401 + 1262 1763 0 3 126,129,144, 0,181,357, +,+,+, 694582 Satellite Satellite 585 chrUn_NT_470956v1 2181 2706 (ACCCCATAGGG)n 410 + 2181 2706 0 3 132,133,145, 0,191,380, +,+,+, 694585 Satellite Satellite 585 chrUn_NT_470956v1 3125 3352 (ACCCCATAGGG)n 640 + 3125 3352 0 2 129,38, 0,189, +,+, 694588 Satellite Satellite 585 chrUn_NT_470957v1 3546 4029 GGXHOI 353 + 3546 4029 0 2 142,305, 0,178, +,+, 694598 Satellite W-chromosome 585 chrUn_NT_470957v1 4558 6136 GGXHOI 344 + 4558 6136 0 3 297,377,855, 0,309,723, +,+,+, 694600 Satellite W-chromosome 585 chrUn_NT_470957v1 7492 8144 GGXHOI 361 + 7492 8144 0 2 372,246, 0,406, +,+, 694603 Satellite W-chromosome 585 chrUn_NT_470960v1 631 1918 GGXHOI 381 - 631 1918 0 2 1048,196, 0,1091, -,-, 694613 Satellite W-chromosome 585 chrUn_NT_470960v1 2265 4434 GGXHOI 404 - 2265 4434 0 6 624,170,190,168,704,137, 0,643,865,1073,1286,2032, -,-,-,-,-,-, 694615 Satellite W-chromosome 585 chrUn_NT_470960v1 4522 4956 GGXHOI 359 - 4522 4956 0 2 289,131, 0,303, -,-, 694616 Satellite W-chromosome 585 chrUn_NT_470960v1 5022 6505 GGXHOI 350 - 5022 6505 0 3 496,302,604, 0,535,879, -,-,-, 694617 Satellite W-chromosome 585 chrUn_NT_470960v1 6578 8170 GGXHOI 395 - 6578 8170 0 5 148,138,204,774,208, 0,191,349,588,1384, -,-,-,-,-, 694618 Satellite W-chromosome 585 chrUn_NT_470961v1 7750 8251 CR1-E 268 - 7750 8251 0 2 178,291, 0,210, -,-, 694627 LINE CR1 585 chrUn_NT_470962v1 907 8171 GGXHOI 415 + 907 8171 0 4 2227,2281,1586,1082, 0,2242,4538,6182, +,+,+,+, 694632 Satellite W-chromosome 585 chrUn_NT_470964v1 1600 1690 G-rich 232 + 1600 1690 0 2 33,14, 0,76, +,+, 694644 Low_complexity Low_complexity 585 chrUn_NT_470968v1 5617 6331 GGXHOI 534 - 5617 6331 0 2 111,167, 0,547, -,-, 694678 Satellite W-chromosome 585 chrUn_NT_470968v1 6399 8172 GGXHOI 522 - 6399 8172 0 4 238,249,37,69, 0,685,1412,1704, -,-,-,-, 694680 Satellite W-chromosome 585 chrUn_NT_470969v1 1220 5998 GGXHOI 405 - 1220 5998 0 6 439,1819,485,538,1099,247, 0,452,2319,2837,3392,4531, -,-,-,-,-,-, 694687 Satellite W-chromosome 585 chrUn_NT_470969v1 6110 8158 GGXHOI 419 - 6110 8158 0 2 1784,216, 0,1832, -,-, 694688 Satellite W-chromosome 585 chrUn_NT_470970v1 3696 5361 GGXHOI 410 + 3696 5361 0 2 1251,394, 0,1271, +,+, 694690 Satellite W-chromosome 585 chrUn_NT_470970v1 5523 6875 GGXHOI 398 + 5523 6875 0 3 270,336,714, 0,285,638, +,+,+, 694691 Satellite W-chromosome 585 chrUn_NT_470971v1 1879 5123 GGXHOI 344 + 1879 5123 0 5 1520,269,374,255,710, 0,1537,1822,2217,2534, +,+,+,+,+, 694695 Satellite W-chromosome 585 chrUn_NT_470971v1 5606 7144 GGXHOI 398 + 5606 7144 0 3 270,1086,147, 0,288,1391, +,+,+, 694696 Satellite W-chromosome 585 chrUn_NT_470972v1 4322 7191 GGXHOI 380 - 4322 7191 0 6 469,325,478,418,476,457, 0,516,885,1422,1883,2412, -,-,-,-,-,-, 694704 Satellite W-chromosome 585 chrUn_NT_470973v1 2368 2990 CR1-H 364 + 2368 2990 0 2 208,379, 0,243, +,+, 694712 LINE CR1 585 chrUn_NT_470973v1 4568 7460 CR1-H 395 + 4568 7460 0 4 207,174,207,373, 0,243,2278,2519, +,+,+,+, 694716 LINE CR1 585 chrUn_NT_470974v1 276 2264 GGXHOI 517 - 276 2264 0 2 1432,514, 0,1474, -,-, 694722 Satellite W-chromosome 585 chrUn_NT_470974v1 3869 5327 GGXHOI 516 - 3869 5327 0 2 1037,379, 0,1079, -,-, 694724 Satellite W-chromosome 585 chrUn_NT_470974v1 5397 8163 GGXHOI 509 - 5397 8163 0 3 858,846,830, 0,871,1936, -,-,-, 694725 Satellite W-chromosome 585 chrUn_NT_470975v1 6276 7373 CR1-B2 668 - 6276 7373 0 2 871,223, 0,874, -,-, 694735 LINE CR1 585 chrUn_NT_470976v1 1854 2901 GGXHOI 341 - 1854 2901 0 2 381,624, 0,423, -,-, 694737 Satellite W-chromosome 585 chrUn_NT_470976v1 4592 5946 GGXHOI 381 - 4592 5946 0 2 420,915, 0,439, -,-, 694741 Satellite W-chromosome 585 chrUn_NT_470976v1 6038 7981 GGXHOI 401 - 6038 7981 0 3 125,188,1586, 0,141,357, -,-,-, 694742 Satellite W-chromosome 585 chrUn_NT_470978v1 772 1408 (CATTG)n 395 + 772 1408 0 3 140,243,200, 0,141,436, +,+,+, 694754 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 1652 2080 (CATTG)n 300 + 1652 2080 0 2 195,177, 0,251, +,+, 694756 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 2165 2768 (CATTG)n 338 + 2165 2768 0 3 178,136,198, 0,214,405, +,+,+, 694758 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 2891 3563 (CATTG)n 303 + 2891 3563 0 3 187,193,243, 0,210,429, +,+,+, 694759 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 4080 4490 (CATTG)n 361 + 4080 4490 0 2 178,196, 0,214, +,+, 694763 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 4800 5380 (CATTG)n 348 + 4800 5380 0 3 186,181,195, 0,204,385, +,+,+, 694765 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 5742 7018 (CATTG)n 378 + 5742 7018 0 6 163,195,194,189,171,238, 0,179,401,595,845,1038, +,+,+,+,+,+, 694769 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 6985 7341 (CACTG)n 258 + 6985 7341 0 2 138,42, 0,314, +,+, 694770 Simple_repeat Simple_repeat 585 chrUn_NT_470978v1 7386 7797 (CATTG)n 322 + 7386 7797 0 2 201,191, 0,220, +,+, 694772 Simple_repeat Simple_repeat 585 chrUn_NT_470980v1 4706 8158 GGXHOI 398 - 4706 8158 0 10 127,125,211,513,390,89,426,274,362,783, 0,142,289,513,1040,1447,1556,1999,2296,2669, -,-,-,-,-,-,-,-,-,-, 694778 Satellite W-chromosome 585 chrUn_NT_470981v1 4158 5804 GGXHOI 365 - 4158 5804 0 2 1244,380, 0,1266, -,-, 694780 Satellite W-chromosome 585 chrUn_NT_470981v1 5884 7399 GGXHOI 417 - 5884 7399 0 2 419,1074, 0,441, -,-, 694781 Satellite W-chromosome 585 chrUn_NT_470981v1 7471 8159 GGXHOI 409 - 7471 8159 0 2 571,94, 0,594, -,-, 694782 Satellite W-chromosome 585 chrUn_NT_470983v1 7836 8184 (ACCCATAGGG)n 716 - 7836 8184 0 2 123,221, 0,127, -,-, 694791 Satellite Satellite 585 chrUn_NT_470984v1 6298 7927 GGXHOI 306 + 6298 7927 0 3 371,174,1049, 0,387,580, +,+,+, 694798 Satellite W-chromosome 585 chrUn_NT_470987v1 6123 7372 GGXHOI 446 - 6123 7372 0 2 679,547, 0,702, -,-, 694813 Satellite W-chromosome 585 chrUn_NT_470989v1 5125 7417 GGXHOI 379 - 5125 7417 0 4 628,428,514,667, 0,641,1090,1625, -,-,-,-, 694817 Satellite W-chromosome 585 chrUn_NT_470989v1 7550 8157 GGXHOI 337 - 7550 8157 0 2 188,403, 0,204, -,-, 694818 Satellite W-chromosome 585 chrUn_NT_470990v1 2669 3654 GGXHOI 386 - 2669 3654 0 2 639,331, 0,654, -,-, 694820 Satellite W-chromosome 585 chrUn_NT_470990v1 3730 6194 GGXHOI 404 - 3730 6194 0 2 640,1812, 0,652, -,-, 694821 Satellite W-chromosome 585 chrUn_NT_470990v1 6308 7303 GGXHOI 392 - 6308 7303 0 2 644,336, 0,659, -,-, 694822 Satellite W-chromosome 585 chrUn_NT_470990v1 7388 8145 GGXHOI 388 - 7388 8145 0 2 439,297, 0,460, -,-, 694823 Satellite W-chromosome 585 chrUn_NT_470993v1 1949 2920 GGXHOI 401 - 1949 2920 0 3 282,327,307, 0,324,664, -,-,-, 694833 Satellite W-chromosome 585 chrUn_NT_470993v1 3032 5808 GGXHOI 434 - 3032 5808 0 9 589,342,132,426,137,291,241,225,136, 0,635,993,1170,1611,1793,2099,2352,2640, -,-,-,-,-,-,-,-,-, 694834 Satellite W-chromosome 585 chrUn_NT_470993v1 6156 7692 GGXHOI 423 - 6156 7692 0 3 431,895,146, 0,443,1390, -,-,-, 694836 Satellite W-chromosome 585 chrUn_NT_470994v1 3293 5375 GGXHOI 383 - 3293 5375 0 3 189,308,1549, 0,208,533, -,-,-, 694841 Satellite W-chromosome 585 chrUn_NT_470994v1 5474 8143 GGXHOI 371 - 5474 8143 0 3 567,1165,903, 0,585,1766, -,-,-, 694842 Satellite W-chromosome 585 chrUn_NT_470995v1 1270 2261 GGXHOI 418 - 1270 2261 0 3 485,146,336, 0,498,655, -,-,-, 694844 Satellite W-chromosome 585 chrUn_NT_470995v1 2344 3334 GGXHOI 379 - 2344 3334 0 2 643,332, 0,658, -,-, 694845 Satellite W-chromosome 585 chrUn_NT_470995v1 3418 4296 GGXHOI 405 - 3418 4296 0 3 484,146,225, 0,496,653, -,-,-, 694846 Satellite W-chromosome 585 chrUn_NT_470995v1 4469 6534 GGXHOI 420 - 4469 6534 0 5 486,146,902,146,337, 0,499,656,1571,1728, -,-,-,-,-, 694847 Satellite W-chromosome 585 chrUn_NT_470995v1 6615 8113 GGXHOI 423 - 6615 8113 0 3 479,146,811, 0,491,687, -,-,-, 694848 Satellite W-chromosome 585 chrUn_NT_470996v1 3800 8125 GGXHOI 545 - 3800 8125 0 3 1301,1893,767, 0,1615,3558, -,-,-, 694852 Satellite W-chromosome 585 chrUn_NT_471001v1 5683 8131 GGXHOI 437 - 5683 8131 0 2 1022,1414, 0,1034, -,-, 694899 Satellite W-chromosome 585 chrUn_NT_471002v1 2425 3391 (CAAGG)n 499 + 2425 3391 0 4 207,156,178,200, 0,388,555,766, +,+,+,+, 694902 Simple_repeat Simple_repeat 585 chrUn_NT_471002v1 3445 4548 (CCTTG)n 495 + 3445 4548 0 4 133,129,334,76, 0,362,519,1027, +,+,+,+, 694904 Simple_repeat Simple_repeat 585 chrUn_NT_471002v1 5116 5920 (CAAGG)n 484 + 5116 5920 0 3 194,375,174, 0,238,630, +,+,+, 694910 Simple_repeat Simple_repeat 585 chrUn_NT_471002v1 6146 6840 (CCTTG)n 401 + 6146 6840 0 2 356,322, 0,372, +,+, 694911 Simple_repeat Simple_repeat 585 chrUn_NT_471002v1 7216 7627 (CCTTG)n 477 + 7216 7627 0 2 199,207, 0,204, +,+, 694913 Simple_repeat Simple_repeat 585 chrUn_NT_471003v1 534 2271 GGXHOI 362 - 534 2271 0 2 516,1159, 0,578, -,-, 694917 Satellite W-chromosome 585 chrUn_NT_471003v1 3369 4990 GGXHOI 322 - 3369 4990 0 3 529,160,814, 0,592,807, -,-,-, 694919 Satellite W-chromosome 585 chrUn_NT_471005v1 2079 2964 GGXHOI 331 - 2079 2964 0 2 707,128, 0,757, -,-, 694928 Satellite W-chromosome 585 chrUn_NT_471005v1 3042 4394 GGXHOI 372 - 3042 4394 0 5 347,462,146,136,129, 0,365,878,1058,1223, -,-,-,-,-, 694929 Satellite W-chromosome 585 chrUn_NT_471005v1 4507 8121 GGXHOI 388 - 4507 8121 0 12 130,137,531,178,95,132,475,413,168,280,203,566, 0,155,336,903,1133,1249,1396,1889,2319,2502,2806,3048, -,-,-,-,-,-,-,-,-,-,-,-, 694930 Satellite W-chromosome 585 chrUn_NT_471006v1 728 4130 GGXHOI 329 + 728 4130 0 5 498,1077,350,1043,304, 0,511,1630,2043,3098, +,+,+,+,+, 694932 Satellite W-chromosome 585 chrUn_NT_471006v1 4362 5096 GGXHOI 351 + 4362 5096 0 2 580,136, 0,598, +,+, 694933 Satellite W-chromosome 585 chrUn_NT_471006v1 5330 6034 GGXHOI 423 + 5330 6034 0 2 257,425, 0,279, +,+, 694934 Satellite W-chromosome 585 chrUn_NT_471006v1 6457 8125 GGXHOI 367 + 6457 8125 0 4 713,441,210,215, 0,737,1228,1453, +,+,+,+, 694936 Satellite W-chromosome 585 chrUn_NT_471007v1 1028 3239 GGLTR10D-int 836 - 1028 3239 0 2 348,1860, 0,351, -,-, 694939 LTR ERVK 585 chrUn_NT_471007v1 3521 4271 (CGAGG)n 559 + 3521 4271 0 3 189,89,242, 0,189,508, +,+,+, 694941 Simple_repeat Simple_repeat 585 chrUn_NT_471007v1 4526 5617 (CGAGG)n 527 + 4526 5617 0 4 297,58,185,301, 0,476,553,790, +,+,+,+, 694946 Simple_repeat Simple_repeat 585 chrUn_NT_471008v1 3602 4413 GGXHOI 356 - 3602 4413 0 2 431,356, 0,455, -,-, 694966 Satellite W-chromosome 585 chrUn_NT_471009v1 897 1128 G-rich 392 + 897 1128 0 2 38,146, 0,85, +,+, 694973 Low_complexity Low_complexity 585 chrUn_NT_471011v1 1516 3445 GGXHOI 387 - 1516 3445 0 3 538,1121,230, 0,558,1699, -,-,-, 694990 Satellite W-chromosome 585 chrUn_NT_471011v1 3592 4594 GGXHOI 432 - 3592 4594 0 2 753,229, 0,773, -,-, 694991 Satellite W-chromosome 585 chrUn_NT_471011v1 5057 8110 GGXHOI 450 - 5057 8110 0 4 1143,147,1057,654, 0,1156,1318,2399, -,-,-,-, 694993 Satellite W-chromosome 585 chrUn_NT_471013v1 1372 2145 (CCCTAA)n 597 + 1372 2145 0 2 191,548, 0,225, +,+, 695016 Simple_repeat Simple_repeat 585 chrUn_NT_471013v1 2268 3396 (CCCTAA)n 557 + 2268 3396 0 4 185,180,187,484, 0,207,419,644, +,+,+,+, 695018 Simple_repeat Simple_repeat 585 chrUn_NT_471013v1 4180 4806 (CCCTAA)n 602 + 4180 4806 0 3 178,182,215, 0,217,411, +,+,+, 695023 Simple_repeat Simple_repeat 585 chrUn_NT_471013v1 4807 4996 (CTAACCC)n 484 + 4807 4996 0 2 7,13, 0,176, +,+, 695024 Simple_repeat Simple_repeat 585 chrUn_NT_471013v1 5005 6216 (CCCTAA)n 705 + 5005 6216 0 2 356,855, 0,356, +,+, 695026 Simple_repeat Simple_repeat 585 chrUn_NT_471013v1 6296 6504 (CCTAA)n 520 + 6296 6504 0 2 11,21, 0,187, +,+, 695028 Simple_repeat Simple_repeat 585 chrUn_NT_471020v1 471 2085 GGXHOI 417 - 471 2085 0 3 649,127,808, 0,667,806, -,-,-, 695102 Satellite W-chromosome 585 chrUn_NT_471020v1 3090 5183 GGXHOI 447 - 3090 5183 0 3 985,586,490, 0,1002,1603, -,-,-, 695104 Satellite W-chromosome 585 chrUn_NT_471020v1 6523 8091 GGXHOI 451 - 6523 8091 0 3 723,145,625, 0,776,943, -,-,-, 695107 Satellite W-chromosome 585 chrUn_NT_471023v1 2289 2801 GGXHOI 288 - 2289 2801 0 2 255,221, 0,291, -,-, 695145 Satellite W-chromosome 585 chrUn_NT_471023v1 3533 3923 GGXHOI 340 - 3533 3923 0 2 150,221, 0,169, -,-, 695147 Satellite W-chromosome 585 chrUn_NT_471023v1 4679 7623 GGXHOI 293 - 4679 7623 0 5 402,388,1687,126,187, 0,421,861,2573,2757, -,-,-,-,-, 695149 Satellite W-chromosome 585 chrUn_NT_471024v1 3411 5169 CR1-X 401 - 3411 5169 0 4 267,124,171,97, 0,267,391,1661, -,-,-,-, 695154 LINE CR1 585 chrUn_NT_471027v1 5399 6049 CR1-H 594 - 5399 6049 0 2 140,504, 0,146, -,-, 695173 LINE CR1 585 chrUn_NT_471030v1 2360 3759 GGLTR7-int 349 - 2360 3759 0 3 282,209,98, 0,1063,1301, -,-,-, 695207 LTR ERV1 585 chrUn_NT_471030v1 4488 6975 GGERVL-B-int 748 - 4488 6975 0 3 923,1246,318, 0,923,2169, -,-,-, 695209 LTR ERVL 585 chrUn_NT_471031v1 5123 6518 GGLTR7-int 298 - 5123 6518 0 3 280,291,99, 0,979,1296, -,-,-, 695216 LTR ERV1 585 chrUn_NT_471032v1 3920 5235 CR1-H 638 + 3920 5235 0 2 1203,112, 0,1203, +,+, 695222 LINE CR1 585 chrUn_NT_471036v1 4659 5451 (CATTG)n 297 + 4659 5451 0 4 106,75,50,173, 0,270,513,619, +,+,+,+, 695266 Simple_repeat Simple_repeat 585 chrUn_NT_471036v1 5619 6284 (CATTG)n 254 + 5619 6284 0 3 200,197,201, 0,212,464, +,+,+, 695270 Simple_repeat Simple_repeat 585 chrUn_NT_471036v1 6586 6652 (C)n 899 + 6586 6652 0 2 21,20, 0,46, +,+, 695272 Simple_repeat Simple_repeat 585 chrUn_NT_471037v1 2321 5453 GGXHOI 414 - 2321 5453 0 5 532,286,732,1454,62, 0,550,849,1603,3070, -,-,-,-,-, 695276 Satellite W-chromosome 585 chrUn_NT_471037v1 7431 8096 GGXHOI 362 - 7431 8096 0 2 167,471, 0,194, -,-, 695280 Satellite W-chromosome 585 chrUn_NT_471040v1 6434 8096 GGXHOI 557 - 6434 8096 0 4 98,523,14,407, 0,293,1224,1255, -,-,-,-, 695291 Satellite W-chromosome 585 chrUn_NT_471045v1 2766 3073 GGXHOI 321 + 2766 3073 0 2 131,128, 0,179, +,+, 695326 Satellite W-chromosome 585 chrUn_NT_471045v1 3469 4033 GGXHOI 345 + 3469 4033 0 2 338,164, 0,400, +,+, 695328 Satellite W-chromosome 585 chrUn_NT_471045v1 4766 5515 GGXHOI 251 + 4766 5515 0 2 154,542, 0,207, +,+, 695330 Satellite W-chromosome 585 chrUn_NT_471047v1 2527 3218 GGXHOI 377 - 2527 3218 0 2 415,234, 0,457, -,-, 695344 Satellite W-chromosome 585 chrUn_NT_471047v1 3780 4488 GGXHOI 372 - 3780 4488 0 2 277,408, 0,300, -,-, 695347 Satellite W-chromosome 585 chrUn_NT_471047v1 4530 7163 GGXHOI 377 - 4530 7163 0 2 820,812, 0,1821, -,-, 695349 Satellite W-chromosome 585 chrUn_NT_471049v1 6945 8081 GGXHOI 379 - 6945 8081 0 3 147,292,657, 0,164,479, -,-,-, 695360 Satellite W-chromosome 585 chrUn_NT_471050v1 3772 4040 (CCCCATTGGG)n 466 - 3772 4040 0 2 126,142, 0,126, -,-, 695365 Satellite Satellite 585 chrUn_NT_471051v1 4460 5109 GGERVK10-int 360 - 4460 5109 0 3 81,140,57, 0,228,592, -,-,-, 695370 LTR ERVK 585 chrUn_NT_471052v1 3489 4758 CR1-H 623 + 3489 4758 0 2 1156,113, 0,1156, +,+, 695374 LINE CR1 585 chrUn_NT_471052v1 7167 7783 CR1-H 630 + 7167 7783 0 2 484,132, 0,484, +,+, 695377 LINE CR1 585 chrUn_NT_471053v1 3822 3961 (CTCCA)n 244 + 3822 3961 0 2 21,70, 0,69, +,+, 695393 Simple_repeat Simple_repeat 585 chrUn_NT_471054v1 812 1109 (GCCCCACAGCT)n 450 + 812 1109 0 2 132,153, 0,144, +,+, 695412 Satellite Satellite 585 chrUn_NT_471055v1 284 3266 CR1-F 566 + 284 3266 0 9 177,190,200,203,198,204,155,196,177, 0,222,454,954,1199,1439,1909,2354,2805, +,+,+,+,+,+,+,+,+, 695424 LINE CR1 585 chrUn_NT_471055v1 3310 5147 CR1-F 601 + 3310 5147 0 7 176,188,194,201,203,202,181, 0,219,449,927,1168,1413,1656, +,+,+,+,+,+,+, 695429 LINE CR1 585 chrUn_NT_471055v1 5191 7964 CR1-F 562 + 5191 7964 0 9 178,192,200,203,202,204,153,187,187, 0,225,459,955,1200,1444,1913,2357,2586, +,+,+,+,+,+,+,+,+, 695431 LINE CR1 585 chrUn_NT_471056v1 7184 8064 GGXHOI 341 - 7184 8064 0 4 254,185,135,232, 0,267,464,648, -,-,-,-, 695440 Satellite W-chromosome 585 chrUn_NT_471057v1 179 1239 GGXHOI 542 - 179 1239 0 2 518,205, 0,855, -,-, 695442 Satellite W-chromosome 585 chrUn_NT_471057v1 1327 3571 GGXHOI 544 - 1327 3571 0 3 535,830,203, 0,874,2041, -,-,-, 695444 Satellite W-chromosome 585 chrUn_NT_471057v1 3659 5746 GGXHOI 532 - 3659 5746 0 4 32,221,717,212, 0,309,847,1875, -,-,-,-, 695447 Satellite W-chromosome 585 chrUn_NT_471057v1 5843 6898 GGXHOI 525 - 5843 6898 0 4 159,100,419,109, 0,346,503,946, -,-,-,-, 695451 Satellite W-chromosome 585 chrUn_NT_471057v1 7519 8073 GGXHOI 524 - 7519 8073 0 2 21,141, 0,413, -,-, 695454 Satellite W-chromosome 585 chrUn_NT_471058v1 5891 8072 Z-REP 813 - 5891 8072 0 2 550,1608, 0,573, -,-, 695460 Satellite macro 585 chrUn_NT_471059v1 1180 6788 GGXHOI 362 - 1180 6788 0 9 894,831,259,272,651,372,903,825,407, 0,917,1811,2088,2377,3048,3435,4354,5201, -,-,-,-,-,-,-,-,-, 695462 Satellite W-chromosome 585 chrUn_NT_471059v1 6885 8064 GGXHOI 359 - 6885 8064 0 3 129,714,279, 0,171,900, -,-,-, 695463 Satellite W-chromosome 585 chrUn_NT_471060v1 1025 5551 GGXHOI 395 - 1025 5551 0 5 756,760,457,1346,1072, 0,779,1599,2079,3454, -,-,-,-,-, 695465 Satellite W-chromosome 585 chrUn_NT_471060v1 5649 8064 GGXHOI 357 - 5649 8064 0 6 724,301,129,670,306,171, 0,747,1065,1230,1923,2244, -,-,-,-,-,-, 695466 Satellite W-chromosome 585 chrUn_NT_471061v1 3565 4985 GGXHOI 347 - 3565 4985 0 3 410,826,135, 0,438,1285, -,-,-, 695468 Satellite W-chromosome 585 chrUn_NT_471061v1 5318 6053 GGXHOI 332 - 5318 6053 0 2 187,523, 0,212, -,-, 695470 Satellite W-chromosome 585 chrUn_NT_471061v1 6562 8043 GGXHOI 340 - 6562 8043 0 2 550,915, 0,566, -,-, 695472 Satellite W-chromosome 585 chrUn_NT_471062v1 183 1304 GGXHOI 516 + 183 1304 0 2 777,17, 0,1104, +,+, 695474 Satellite W-chromosome 585 chrUn_NT_471062v1 1372 2309 GGXHOI 487 + 1372 2309 0 3 386,89,139, 0,408,798, +,+,+, 695476 Satellite W-chromosome 585 chrUn_NT_471062v1 2854 8002 GGXHOI 536 + 2854 8002 0 9 177,248,192,316,193,302,191,256,220, 0,643,1329,1843,2530,3034,3729,4243,4928, +,+,+,+,+,+,+,+,+, 695480 Satellite W-chromosome 585 chrUn_NT_471065v1 3272 7454 CR1-H 600 + 3272 7454 0 4 1222,82,479,138, 0,1222,3559,4044, +,+,+,+, 695525 LINE CR1 585 chrUn_NT_471067v1 1004 2183 GGXHOI 308 - 1004 2183 0 2 446,717, 0,462, -,-, 695535 Satellite W-chromosome 585 chrUn_NT_471067v1 3401 4738 GGXHOI 346 - 3401 4738 0 3 685,265,305, 0,743,1032, -,-,-, 695537 Satellite W-chromosome 585 chrUn_NT_471067v1 5254 5940 GGXHOI 336 - 5254 5940 0 2 482,145, 0,541, -,-, 695539 Satellite W-chromosome 585 chrUn_NT_471067v1 6067 7459 GGXHOI 363 - 6067 7459 0 3 671,389,257, 0,688,1135, -,-,-, 695540 Satellite W-chromosome 585 chrUn_NT_471068v1 643 2476 GGXHOI 438 - 643 2476 0 2 549,1222, 0,611, -,-, 695543 Satellite W-chromosome 585 chrUn_NT_471068v1 3281 5646 GGXHOI 431 - 3281 5646 0 3 315,934,1032, 0,377,1333, -,-,-, 695544 Satellite W-chromosome 585 chrUn_NT_471068v1 5731 7290 GGXHOI 436 - 5731 7290 0 3 275,931,274, 0,337,1285, -,-,-, 695545 Satellite W-chromosome 585 chrUn_NT_471069v1 3865 4810 GGXHOI 343 + 3865 4810 0 2 141,755, 0,190, +,+, 695553 Satellite W-chromosome 585 chrUn_NT_471070v1 529 1063 GGXHOI 334 - 529 1063 0 2 227,272, 0,262, -,-, 695559 Satellite W-chromosome 585 chrUn_NT_471070v1 1797 4074 GGXHOI 329 - 1797 4074 0 3 471,33,1104, 0,516,1173, -,-,-, 695562 Satellite W-chromosome 585 chrUn_NT_471071v1 1052 3167 GGXHOI 383 - 1052 3167 0 2 1006,1046, 0,1069, -,-, 695574 Satellite W-chromosome 585 chrUn_NT_471071v1 3835 4877 GGXHOI 371 - 3835 4877 0 2 509,470, 0,572, -,-, 695576 Satellite W-chromosome 585 chrUn_NT_471071v1 6012 6931 GGXHOI 353 - 6012 6931 0 2 475,386, 0,533, -,-, 695579 Satellite W-chromosome 585 chrUn_NT_471072v1 1128 2401 Sat-CR1_GG 138 - 1128 2401 0 2 349,144, 0,1129, -,-, 695584 Satellite Satellite 585 chrUn_NT_471072v1 2294 3479 GGXHOI 534 - 2294 3479 0 2 159,981, 0,204, -,-, 695586 Satellite W-chromosome 585 chrUn_NT_471072v1 3518 8028 GGXHOI 576 - 3518 8028 0 7 264,14,152,22,151,28,22, 0,2077,2128,2515,3437,4225,4488, -,-,-,-,-,-,-, 695588 Satellite W-chromosome 585 chrUn_NT_471073v1 1106 2034 GGXHOI 388 - 1106 2034 0 2 313,580, 0,348, -,-, 695595 Satellite W-chromosome 585 chrUn_NT_471073v1 2118 3101 GGXHOI 396 - 2118 3101 0 2 556,409, 0,574, -,-, 695596 Satellite W-chromosome 585 chrUn_NT_471073v1 3183 4156 GGXHOI 395 - 3183 4156 0 3 546,147,247, 0,565,726, -,-,-, 695597 Satellite W-chromosome 585 chrUn_NT_471073v1 4239 4962 GGXHOI 403 - 4239 4962 0 3 389,143,148, 0,413,575, -,-,-, 695598 Satellite W-chromosome 585 chrUn_NT_471073v1 5136 5959 GGXHOI 405 - 5136 5959 0 2 549,261, 0,562, -,-, 695599 Satellite W-chromosome 585 chrUn_NT_471073v1 6273 7165 GGXHOI 331 - 6273 7165 0 2 610,271, 0,621, -,-, 695600 Satellite W-chromosome 585 chrUn_NT_471078v1 825 1555 (CGAGG)n 493 + 825 1555 0 3 472,182,44, 0,485,686, +,+,+, 695616 Simple_repeat Simple_repeat 585 chrUn_NT_471078v1 1602 2227 (CGAGG)n 512 + 1602 2227 0 2 285,327, 0,298, +,+, 695618 Simple_repeat Simple_repeat 585 chrUn_NT_471078v1 2278 3158 (CGAGG)n 563 + 2278 3158 0 3 216,98,363, 0,392,517, +,+,+, 695620 Simple_repeat Simple_repeat 585 chrUn_NT_471078v1 4629 4874 (CGAGG)n 474 + 4629 4874 0 2 182,44, 0,201, +,+, 695625 Simple_repeat Simple_repeat 585 chrUn_NT_471078v1 5447 5982 (CGAGG)n 570 + 5447 5982 0 2 174,302, 0,233, +,+, 695629 Simple_repeat Simple_repeat 585 chrUn_NT_471079v1 3301 5912 GGXHOI 382 - 3301 5912 0 9 283,307,122,134,150,524,257,224,455, 0,310,632,771,920,1086,1627,1911,2156, -,-,-,-,-,-,-,-,-, 695639 Satellite W-chromosome 585 chrUn_NT_471079v1 6040 6958 GGXHOI 425 - 6040 6958 0 2 480,376, 0,542, -,-, 695640 Satellite W-chromosome 585 chrUn_NT_471079v1 7067 7770 GGXHOI 372 - 7067 7770 0 2 431,220, 0,483, -,-, 695641 Satellite W-chromosome 585 chrUn_NT_471082v1 1469 2765 (ACCCATAGAG)n 740 + 1469 2765 0 4 353,342,12,41, 0,475,938,1255, +,+,+,+, 695658 Satellite Satellite 585 chrUn_NT_471082v1 2501 2724 (ACCCCATAGGG)n 646 + 2501 2724 0 2 130,93, 0,130, +,+, 695662 Satellite Satellite 585 chrUn_NT_471082v1 3442 3832 (ACCCCATAGGG)n 688 + 3442 3832 0 3 266,103,21, 0,266,369, +,+,+, 695666 Satellite Satellite 585 chrUn_NT_471082v1 4979 5729 (ACCCCATAGGG)n 623 + 4979 5729 0 3 125,131,367, 0,128,383, +,+,+, 695669 Satellite Satellite 585 chrUn_NT_471082v1 7467 7915 (CTCTATGGGG)n 677 - 7467 7915 0 3 134,63,134, 0,251,314, -,-,-, 695674 Satellite Satellite 585 chrUn_NT_471084v1 4028 7541 GGXHOI 346 - 4028 7541 0 3 945,2302,187, 0,963,3326, -,-,-, 695689 Satellite W-chromosome 585 chrUn_NT_471085v1 2775 3393 CR1-H 371 + 2775 3393 0 2 208,374, 0,244, +,+, 695693 LINE CR1 585 chrUn_NT_471086v1 4047 4550 CR1-H 383 + 4047 4550 0 2 189,117, 0,386, +,+, 695702 LINE CR1 585 chrUn_NT_471086v1 6359 6953 CR1-H 297 + 6359 6953 0 2 187,372, 0,222, +,+, 695705 LINE CR1 585 chrUn_NT_471088v1 1840 5695 GGXHOI 413 + 1840 5695 0 3 917,667,2194, 0,932,1661, +,+,+, 695715 Satellite W-chromosome 585 chrUn_NT_471088v1 5765 6879 GGXHOI 275 + 5765 6879 0 2 121,960, 0,154, +,+, 695716 Satellite W-chromosome 585 chrUn_NT_471089v1 1701 3121 GGXHOI 345 - 1701 3121 0 2 1012,384, 0,1036, -,-, 695720 Satellite W-chromosome 585 chrUn_NT_471089v1 3204 8043 GGXHOI 332 - 3204 8043 0 5 528,1505,992,614,1125, 0,544,2065,3075,3714, -,-,-,-,-, 695721 Satellite W-chromosome 585 chrUn_NT_471093v1 2436 2609 GA-rich 356 + 2436 2609 0 2 87,31, 0,142, +,+, 695746 Low_complexity Low_complexity 585 chrUn_NT_471095v1 1623 1931 CR1-X 523 + 1623 1931 0 3 171,77,50, 0,171,258, +,+,+, 695772 LINE CR1 585 chrUn_NT_471099v1 440 1307 (CCTCG)n 545 + 440 1307 0 2 655,177, 0,690, +,+, 695802 Simple_repeat Simple_repeat 585 chrUn_NT_471099v1 3785 4442 (CCTCG)n 563 + 3785 4442 0 2 303,306, 0,351, +,+, 695810 Simple_repeat Simple_repeat 585 chrUn_NT_471099v1 4523 5407 (CCTCG)n 552 + 4523 5407 0 2 174,681, 0,203, +,+, 695812 Simple_repeat Simple_repeat 585 chrUn_NT_471099v1 6190 6592 (CCTCG)n 534 + 6190 6592 0 2 183,172, 0,230, +,+, 695816 Simple_repeat Simple_repeat 585 chrUn_NT_471099v1 6745 8033 (CCTCG)n 492 + 6745 8033 0 4 206,367,252,429, 0,217,607,859, +,+,+,+, 695818 Simple_repeat Simple_repeat 585 chrUn_NT_471101v1 5654 6495 Z-REP 519 - 5654 6495 0 2 315,442, 0,399, -,-, 695824 Satellite macro 585 chrUn_NT_471101v1 6493 6699 CR1-H 666 - 6493 6699 0 2 117,81, 0,125, -,-, 695825 LINE CR1 585 chrUn_NT_471103v1 2186 4009 GGXHOI 333 - 2186 4009 0 5 101,951,153,329,153, 0,116,1108,1305,1670, -,-,-,-,-, 695836 Satellite W-chromosome 585 chrUn_NT_471103v1 4082 4975 GGXHOI 383 - 4082 4975 0 4 283,129,142,301, 0,294,434,592, -,-,-,-, 695837 Satellite W-chromosome 585 chrUn_NT_471103v1 5508 5803 GGXHOI 352 - 5508 5803 0 2 133,146, 0,149, -,-, 695840 Satellite W-chromosome 585 chrUn_NT_471103v1 5869 6645 GGXHOI 379 - 5869 6645 0 2 409,356, 0,420, -,-, 695841 Satellite W-chromosome 585 chrUn_NT_471103v1 6959 7504 GGXHOI 363 - 6959 7504 0 2 138,390, 0,155, -,-, 695843 Satellite W-chromosome 585 chrUn_NT_471103v1 7659 8029 GGXHOI 385 - 7659 8029 0 2 165,150, 0,220, -,-, 695844 Satellite W-chromosome 585 chrUn_NT_471104v1 1143 8025 GGXHOI 440 - 1143 8025 0 6 2286,1239,1239,383,1409,142, 0,2343,3645,4895,5297,6740, -,-,-,-,-,-, 695846 Satellite W-chromosome 585 chrUn_NT_471107v1 4505 5565 (ATG)n 680 + 4505 5565 0 2 850,183, 0,877, +,+, 695868 Simple_repeat Simple_repeat 585 chrUn_NT_471109v1 875 1117 (ACCCATAGAG)n 592 + 875 1117 0 2 84,40, 0,202, +,+, 695881 Satellite Satellite 585 chrUn_NT_471109v1 1840 2643 (ACCCATAGAG)n 690 + 1840 2643 0 4 216,156,119,246, 0,222,396,557, +,+,+,+, 695885 Satellite Satellite 585 chrUn_NT_471109v1 2825 3432 (ACCCATAGAG)n 626 - 2825 3432 0 2 141,222, 0,385, -,-, 695887 Satellite Satellite 585 chrUn_NT_471109v1 3652 4158 (ACCCATAGAG)n 619 + 3652 4158 0 3 143,105,131, 0,270,375, +,+,+, 695891 Satellite Satellite 585 chrUn_NT_471109v1 4627 5084 (CTCTATGGGG)n 616 - 4627 5084 0 2 184,30, 0,427, -,-, 695897 Satellite Satellite 585 chrUn_NT_471109v1 4811 5054 (ACCCCATAGGG)n 432 + 4811 5054 0 2 100,24, 0,219, +,+, 695898 Satellite Satellite 585 chrUn_NT_471109v1 4911 5313 (ACCCATAGAG)n 661 + 4911 5313 0 2 119,283, 0,119, +,+, 695899 Satellite Satellite 585 chrUn_NT_471109v1 5463 6054 (ACCCATAGAG)n 575 + 5463 6054 0 4 115,173,117,110, 0,115,336,481, +,+,+,+, 695901 Satellite Satellite 585 chrUn_NT_471109v1 6487 6739 (ACCCATAGAG)n 492 + 6487 6739 0 2 78,54, 0,198, +,+, 695905 Satellite Satellite 585 chrUn_NT_471109v1 6836 7342 (ACCCATAGAG)n 582 + 6836 7342 0 2 108,362, 0,144, +,+, 695907 Satellite Satellite 585 chrUn_NT_471110v1 524 710 (CGCACG)n 172 + 524 710 0 2 134,23, 0,163, +,+, 695911 Simple_repeat Simple_repeat 585 chrUn_NT_471114v1 6378 7497 CR1-B2 576 - 6378 7497 0 2 894,222, 0,897, -,-, 695943 LINE CR1 585 chrUn_NT_471115v1 2903 3357 CR1-F 555 + 2903 3357 0 2 199,210, 0,244, +,+, 695949 LINE CR1 585 chrUn_NT_471115v1 3400 4762 CR1-F 501 + 3400 4762 0 5 204,201,204,155,202, 0,246,489,960,1160, +,+,+,+,+, 695950 LINE CR1 585 chrUn_NT_471115v1 4804 5255 CR1-F 538 + 4804 5255 0 2 198,209, 0,242, +,+, 695952 LINE CR1 585 chrUn_NT_471115v1 5298 6661 CR1-F 504 + 5298 6661 0 5 203,204,203,155,203, 0,244,490,960,1160, +,+,+,+,+, 695953 LINE CR1 585 chrUn_NT_471115v1 6702 7156 CR1-F 555 + 6702 7156 0 2 199,210, 0,244, +,+, 695955 LINE CR1 585 chrUn_NT_471115v1 7199 8008 CR1-F 549 + 7199 8008 0 3 204,203,71, 0,246,738, +,+,+, 695956 LINE CR1 585 chrUn_NT_471116v1 3584 5159 GGXHOI 364 - 3584 5159 0 4 713,242,346,159, 0,737,1016,1416, -,-,-,-, 695959 Satellite W-chromosome 585 chrUn_NT_471117v1 989 1520 (CGAGG)n 554 + 989 1520 0 2 334,177, 0,354, +,+, 695965 Simple_repeat Simple_repeat 585 chrUn_NT_471117v1 2400 4503 (CGAGG)n 542 + 2400 4503 0 5 353,624,178,520,325, 0,371,1032,1233,1778, +,+,+,+,+, 695973 Simple_repeat Simple_repeat 585 chrUn_NT_471117v1 4619 5013 (CGAGG)n 360 + 4619 5013 0 2 171,197, 0,197, +,+, 695975 Simple_repeat Simple_repeat 585 chrUn_NT_471117v1 6097 6297 (GAGGC)n 266 + 6097 6297 0 2 107,55, 0,145, +,+, 695981 Simple_repeat Simple_repeat 585 chrUn_NT_471117v1 6300 7032 (CGAGG)n 537 + 6300 7032 0 2 413,291, 0,441, +,+, 695983 Simple_repeat Simple_repeat 585 chrUn_NT_471118v1 5454 6725 GGXHOI 572 - 5454 6725 0 2 972,90, 0,1181, -,-, 695992 Satellite W-chromosome 585 chrUn_NT_471120v1 258 2646 GGXHOI 544 + 258 2646 0 3 959,159,800, 0,1385,1588, +,+,+, 696002 Satellite W-chromosome 585 chrUn_NT_471120v1 2689 6850 GGXHOI 566 + 2689 6850 0 4 572,54,80,993, 0,783,851,3168, +,+,+,+, 696005 Satellite W-chromosome 585 chrUn_NT_471121v1 253 779 (CCTTG)n 443 + 253 779 0 2 217,285, 0,241, +,+, 696014 Simple_repeat Simple_repeat 585 chrUn_NT_471121v1 1662 2753 (CAAGG)n 485 + 1662 2753 0 4 334,187,131,90, 0,378,593,1001, +,+,+,+, 696018 Simple_repeat Simple_repeat 585 chrUn_NT_471121v1 2769 3835 (CCTTG)n 511 + 2769 3835 0 4 363,209,184,219, 0,363,635,847, +,+,+,+, 696021 Simple_repeat Simple_repeat 585 chrUn_NT_471121v1 3909 5341 GGXHOI 315 - 3909 5341 0 2 292,1080, 0,352, -,-, 696022 Satellite W-chromosome 585 chrUn_NT_471123v1 6095 7971 GGXHOI 427 - 6095 7971 0 4 344,686,647,142, 0,359,1065,1734, -,-,-,-, 696037 Satellite W-chromosome 585 chrUn_NT_471125v1 2059 2360 (ACCCCATAGGG)n 442 + 2059 2360 0 2 82,88, 0,213, +,+, 696041 Satellite Satellite 585 chrUn_NT_471127v1 724 1050 (CTCTATGGGG)n 531 - 724 1050 0 2 102,201, 0,125, -,-, 696055 Satellite Satellite 585 chrUn_NT_471127v1 1410 1658 (CTCTATGGGG)n 424 - 1410 1658 0 2 117,88, 0,160, -,-, 696058 Satellite Satellite 585 chrUn_NT_471127v1 2041 2418 (CTCTATGGGG)n 479 - 2041 2418 0 3 109,93,112, 0,134,265, -,-,-, 696061 Satellite Satellite 585 chrUn_NT_471127v1 3455 3983 (CTCTATGGGG)n 495 - 3455 3983 0 4 117,119,118,108, 0,135,278,420, -,-,-,-, 696067 Satellite Satellite 585 chrUn_NT_471127v1 4515 4760 (CTCTATGGGG)n 433 - 4515 4760 0 2 122,97, 0,148, -,-, 696070 Satellite Satellite 585 chrUn_NT_471128v1 187 7310 GGXHOI 387 + 187 7310 0 7 508,976,967,948,1939,883,788, 0,527,1523,2510,3478,5437,6335, +,+,+,+,+,+,+, 696087 Satellite W-chromosome 585 chrUn_NT_471129v1 608 758 (TATGGGCCC)n 797 + 608 758 0 2 52,54, 0,96, +,+, 696094 Simple_repeat Simple_repeat 585 chrUn_NT_471129v1 799 1260 (ACCCATAGGG)n 441 - 799 1260 0 3 168,105,125, 0,209,336, -,-,-, 696095 Satellite Satellite 585 chrUn_NT_471129v1 1349 2137 (ACCCATAGGG)n 571 - 1349 2137 0 3 282,128,378, 0,282,410, -,-,-, 696097 Satellite Satellite 585 chrUn_NT_471130v1 1303 2347 GGXHOI 341 + 1303 2347 0 2 427,577, 0,467, +,+, 696105 Satellite W-chromosome 585 chrUn_NT_471130v1 4562 7596 GGXHOI 381 + 4562 7596 0 3 1033,1083,813, 0,1095,2221, +,+,+, 696109 Satellite W-chromosome 585 chrUn_NT_471131v1 5309 7891 GGXHOI 366 - 5309 7891 0 3 144,1738,606, 0,200,1976, -,-,-, 696113 Satellite W-chromosome 585 chrUn_NT_471132v1 7493 7983 (TTAGGG)n 496 + 7493 7983 0 2 286,6, 0,484, +,+, 696117 Simple_repeat Simple_repeat 585 chrUn_NT_471134v1 3323 4722 GGXHOI 392 + 3323 4722 0 4 137,307,189,719, 0,156,478,680, +,+,+,+, 696123 Satellite W-chromosome 585 chrUn_NT_471134v1 4791 5943 GGXHOI 476 + 4791 5943 0 3 301,152,626, 0,359,526, +,+,+, 696124 Satellite W-chromosome 585 chrUn_NT_471134v1 6017 6664 GGXHOI 369 + 6017 6664 0 3 123,219,242, 0,143,405, +,+,+, 696125 Satellite W-chromosome 585 chrUn_NT_471135v1 2757 3114 (CCTTG)n 488 + 2757 3114 0 2 175,170, 0,187, +,+, 696134 Simple_repeat Simple_repeat 585 chrUn_NT_471135v1 3160 3484 (GCCTG)n 324 + 3160 3484 0 2 40,226, 0,98, +,+, 696136 Simple_repeat Simple_repeat 585 chrUn_NT_471135v1 3532 4280 (CAAGG)n 483 + 3532 4280 0 3 182,202,335, 0,182,413, +,+,+, 696137 Simple_repeat Simple_repeat 585 chrUn_NT_471135v1 4236 4563 (CAGGC)n 430 + 4236 4563 0 2 96,46, 0,281, +,+, 696138 Simple_repeat Simple_repeat 585 chrUn_NT_471135v1 5899 6265 (CCTTG)n 520 + 5899 6265 0 2 178,175, 0,191, +,+, 696146 Simple_repeat Simple_repeat 585 chrUn_NT_471135v1 6311 6639 (GCCTG)n 343 + 6311 6639 0 2 40,227, 0,101, +,+, 696148 Simple_repeat Simple_repeat 585 chrUn_NT_471135v1 7266 7741 (CAAGG)n 538 + 7266 7741 0 2 273,23, 0,452, +,+, 696152 Simple_repeat Simple_repeat 585 chrUn_NT_471137v1 4276 6952 GGXHOI 321 - 4276 6952 0 3 569,1774,288, 0,598,2388, -,-,-, 696167 Satellite W-chromosome 585 chrUn_NT_471137v1 7567 7969 GGXHOI 268 - 7567 7969 0 2 108,254, 0,148, -,-, 696169 Satellite W-chromosome 585 chrUn_NT_471138v1 6232 7977 GGXHOI 403 - 6232 7977 0 5 178,293,135,135,876, 0,190,530,689,869, -,-,-,-,-, 696171 Satellite W-chromosome 585 chrUn_NT_471139v1 3907 5397 GGXHOI 311 - 3907 5397 0 2 1253,178, 0,1312, -,-, 696174 Satellite W-chromosome 585 chrUn_NT_471140v1 3751 4143 (CATCC)n 617 + 3751 4143 0 2 190,187, 0,205, +,+, 696181 Simple_repeat Simple_repeat 585 chrUn_NT_471142v1 626 4852 GGXHOI 323 - 626 4852 0 10 269,241,404,144,807,136,459,186,1134,134, 0,299,557,993,1154,2000,2190,2667,2915,4092, -,-,-,-,-,-,-,-,-,-, 696198 Satellite W-chromosome 585 chrUn_NT_471142v1 4944 7953 GGXHOI 379 - 4944 7953 0 7 251,490,133,710,232,211,775, 0,272,804,971,1737,1980,2234, -,-,-,-,-,-,-, 696199 Satellite W-chromosome 585 chrUn_NT_471146v1 4401 7116 GGXHOI 337 - 4401 7116 0 3 374,327,1934, 0,401,781, -,-,-, 696224 Satellite W-chromosome 585 chrUn_NT_471149v1 1097 1255 G-rich 470 + 1097 1255 0 2 79,51, 0,107, +,+, 696237 Low_complexity Low_complexity 585 chrUn_NT_471155v1 61 1448 GGERVL-A-int 564 - 61 1448 0 2 941,443, 0,944, -,-, 696297 LTR ERVL 585 chrUn_NT_471156v1 4600 7961 GGXHOI 438 + 4600 7961 0 3 1871,848,579, 0,1888,2782, +,+,+, 696305 Satellite W-chromosome 585 chrUn_NT_471158v1 1702 1964 (ACCCCATAGGG)n 530 + 1702 1964 0 2 82,54, 0,208, +,+, 696341 Satellite Satellite 585 chrUn_NT_471162v1 916 1489 GGXHOI 506 - 916 1489 0 3 257,146,147, 0,269,426, -,-,-, 696368 Satellite W-chromosome 585 chrUn_NT_471162v1 3344 4673 GGXHOI 606 - 3344 4673 0 2 284,249, 0,1080, -,-, 696372 Satellite W-chromosome 585 chrUn_NT_471162v1 6736 7949 GGXHOI 582 - 6736 7949 0 2 407,250, 0,963, -,-, 696377 Satellite W-chromosome 585 chrUn_NT_471164v1 1119 3921 GGXHOI 541 - 1119 3921 0 2 1695,1056, 0,1746, -,-, 696381 Satellite W-chromosome 585 chrUn_NT_471165v1 672 1995 GGXHOI 598 - 672 1995 0 2 976,145, 0,1178, -,-, 696386 Satellite W-chromosome 585 chrUn_NT_471165v1 3934 6138 GGXHOI 576 - 3934 6138 0 2 370,1813, 0,391, -,-, 696389 Satellite W-chromosome 585 chrUn_NT_471165v1 7059 7941 GGXHOI 565 - 7059 7941 0 2 232,588, 0,294, -,-, 696392 Satellite W-chromosome 585 chrUn_NT_471166v1 1138 2223 GGXHOI 370 - 1138 2223 0 3 462,444,145, 0,482,940, -,-,-, 696394 Satellite W-chromosome 585 chrUn_NT_471166v1 2310 4890 GGXHOI 404 - 2310 4890 0 5 520,396,565,480,515, 0,539,955,1535,2065, -,-,-,-,-, 696395 Satellite W-chromosome 585 chrUn_NT_471166v1 5493 7377 GGXHOI 393 - 5493 7377 0 3 477,442,934, 0,492,950, -,-,-, 696397 Satellite W-chromosome 585 chrUn_NT_471167v1 6238 7113 GGXHOI 392 + 6238 7113 0 2 295,534, 0,341, +,+, 696407 Satellite W-chromosome 585 chrUn_NT_471168v1 5043 6776 GGERVL-A-int 752 + 5043 6776 0 2 457,1276, 0,457, +,+, 696411 LTR ERVL 585 chrUn_NT_471169v1 2491 3874 GGLTR7-int 302 + 2491 3874 0 3 98,308,289, 0,100,1094, +,+,+, 696416 LTR ERV1 585 chrUn_NT_471170v1 1603 4942 GGXHOI 490 - 1603 4942 0 4 1079,91,197,820, 0,1490,2000,2519, -,-,-,-, 696422 Satellite W-chromosome 585 chrUn_NT_471170v1 5015 5860 GGXHOI 494 - 5015 5860 0 2 159,657, 0,188, -,-, 696426 Satellite W-chromosome 585 chrUn_NT_471170v1 6087 7935 GGXHOI 572 - 6087 7935 0 4 354,337,192,21, 0,664,1324,1827, -,-,-,-, 696428 Satellite W-chromosome 585 chrUn_NT_471175v1 2433 3422 GGXHOI 416 - 2433 3422 0 2 820,155, 0,834, -,-, 696465 Satellite W-chromosome 585 chrUn_NT_471175v1 3550 4503 GGXHOI 390 - 3550 4503 0 2 647,291, 0,662, -,-, 696466 Satellite W-chromosome 585 chrUn_NT_471175v1 4589 5527 GGXHOI 405 - 4589 5527 0 3 489,145,276, 0,502,662, -,-,-, 696467 Satellite W-chromosome 585 chrUn_NT_471175v1 6161 7725 GGXHOI 403 - 6161 7725 0 3 1132,149,248, 0,1152,1316, -,-,-, 696469 Satellite W-chromosome 585 chrUn_NT_471177v1 2696 3187 GGXHOI 444 - 2696 3187 0 2 318,152, 0,339, -,-, 696481 Satellite W-chromosome 585 chrUn_NT_471177v1 3294 4495 GGXHOI 463 - 3294 4495 0 2 430,755, 0,446, -,-, 696482 Satellite W-chromosome 585 chrUn_NT_471177v1 4706 7931 GGXHOI 406 - 4706 7931 0 5 384,383,1836,297,218, 0,430,832,2691,3007, -,-,-,-,-, 696483 Satellite W-chromosome 585 chrUn_NT_471178v1 1039 3293 GGERV10_LTR 822 + 1039 3293 0 2 40,38, 0,2216, +,+, 696488 LTR ERVL 585 chrUn_NT_471178v1 1080 3123 GGLTR10D-int 785 + 1080 3123 0 3 846,775,363, 0,902,1680, +,+,+, 696489 LTR ERVK 585 chrUn_NT_471178v1 3305 5763 GGLTR7-int 614 - 3305 5763 0 3 795,858,339, 0,803,2119, -,-,-, 696490 LTR ERV1 585 chrUn_NT_471179v1 5352 7279 GGXHOI 378 - 5352 7279 0 2 831,1033, 0,894, -,-, 696498 Satellite W-chromosome 585 chrUn_NT_471181v1 1706 3094 GGXHOI 404 - 1706 3094 0 2 1100,265, 0,1123, -,-, 696508 Satellite W-chromosome 585 chrUn_NT_471181v1 3290 4806 GGXHOI 420 - 3290 4806 0 2 517,981, 0,535, -,-, 696509 Satellite W-chromosome 585 chrUn_NT_471181v1 5109 6130 GGXHOI 385 - 5109 6130 0 3 209,314,456, 0,226,565, -,-,-, 696510 Satellite W-chromosome 585 chrUn_NT_471181v1 6249 6980 GGXHOI 424 - 6249 6980 0 2 557,157, 0,574, -,-, 696512 Satellite W-chromosome 585 chrUn_NT_471181v1 7054 7928 GGXHOI 370 - 7054 7928 0 2 260,587, 0,287, -,-, 696513 Satellite W-chromosome 585 chrUn_NT_471183v1 1277 1717 (CACTG)n 284 + 1277 1717 0 2 230,195, 0,245, +,+, 696542 Simple_repeat Simple_repeat 585 chrUn_NT_471184v1 1705 2078 (CTCTATGGGG)n 483 + 1705 2078 0 2 122,232, 0,141, +,+, 696553 Satellite Satellite 585 chrUn_NT_471184v1 4819 5287 CR1-Y1_Aves 477 - 4819 5287 0 2 68,62, 0,406, -,-, 696559 LINE CR1 585 chrUn_NT_471184v1 6392 6600 CR1-D2 494 - 6392 6600 0 2 17,62, 0,146, -,-, 696566 LINE CR1 585 chrUn_NT_471185v1 903 1721 GGXHOI 392 - 903 1721 0 2 359,439, 0,379, -,-, 696572 Satellite W-chromosome 585 chrUn_NT_471185v1 5260 6582 GGXHOI 401 - 5260 6582 0 3 494,349,437, 0,521,885, -,-,-, 696577 Satellite W-chromosome 585 chrUn_NT_471185v1 7173 7917 GGXHOI 370 - 7173 7917 0 2 487,198, 0,546, -,-, 696579 Satellite W-chromosome 585 chrUn_NT_471186v1 3366 4107 GGXHOI 438 - 3366 4107 0 2 261,443, 0,298, -,-, 696582 Satellite W-chromosome 585 chrUn_NT_471186v1 4208 4604 GGXHOI 363 - 4208 4604 0 2 161,221, 0,175, -,-, 696583 Satellite W-chromosome 585 chrUn_NT_471186v1 4669 7923 GGXHOI 391 - 4669 7923 0 9 223,147,617,265,131,245,370,275,694, 0,270,446,1077,1405,1589,1851,2255,2560, -,-,-,-,-,-,-,-,-, 696584 Satellite W-chromosome 585 chrUn_NT_471187v1 682 857 (CCTCT)n 510 + 682 857 0 2 104,23, 0,152, +,+, 696588 Simple_repeat Simple_repeat 585 chrUn_NT_471189v1 2592 7910 GGXHOI 488 + 2592 7910 0 9 571,1230,249,157,149,562,359,732,537, 0,590,1863,2150,2319,2689,3309,3718,4781, +,+,+,+,+,+,+,+,+, 696640 Satellite W-chromosome 585 chrUn_NT_471190v1 79 633 (CGAGG)n 544 + 79 633 0 2 191,326, 0,228, +,+, 696644 Simple_repeat Simple_repeat 585 chrUn_NT_471190v1 1696 3735 (CGAGG)n 542 + 1696 3735 0 4 176,1048,536,178, 0,187,1279,1861, +,+,+,+, 696650 Simple_repeat Simple_repeat 585 chrUn_NT_471190v1 3790 4309 (CGAGG)n 562 + 3790 4309 0 2 316,179, 0,340, +,+, 696652 Simple_repeat Simple_repeat 585 chrUn_NT_471190v1 4409 4792 (CGAGG)n 619 + 4409 4792 0 2 179,179, 0,204, +,+, 696653 Simple_repeat Simple_repeat 585 chrUn_NT_471190v1 5474 7248 (CGAGG)n 535 + 5474 7248 0 2 1069,652, 0,1122, +,+, 696658 Simple_repeat Simple_repeat 585 chrUn_NT_471190v1 7406 7781 (CGAGG)n 537 + 7406 7781 0 2 180,179, 0,196, +,+, 696660 Simple_repeat Simple_repeat 585 chrUn_NT_471191v1 1277 2449 GGXHOI 291 + 1277 2449 0 4 107,360,483,172, 0,129,502,1000, +,+,+,+, 696664 Satellite W-chromosome 585 chrUn_NT_471191v1 2710 6666 GGXHOI 377 + 2710 6666 0 14 397,348,210,236,154,315,178,283,415,108,167,53,397,340, 0,415,816,1056,1309,1518,1890,2105,2400,2828,2956,3136,3203,3616, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 696665 Satellite W-chromosome 585 chrUn_NT_471191v1 7004 7902 GGXHOI 361 + 7004 7902 0 4 188,256,195,155, 0,222,494,743, +,+,+,+, 696666 Satellite W-chromosome 585 chrUn_NT_471192v1 3810 7914 GGXHOI 366 - 3810 7914 0 4 791,411,1341,1472, 0,811,1238,2632, -,-,-,-, 696668 Satellite W-chromosome 585 chrUn_NT_471195v1 3067 3690 CR1-H 678 - 3067 3690 0 2 139,478, 0,145, -,-, 696693 LINE CR1 585 chrUn_NT_471195v1 5631 6984 CR1-H 659 - 5631 6984 0 2 116,1237, 0,116, -,-, 696696 LINE CR1 585 chrUn_NT_471196v1 627 4977 GGXHOI 387 - 627 4977 0 3 3256,709,353, 0,3271,3997, -,-,-, 696698 Satellite W-chromosome 585 chrUn_NT_471196v1 5076 7896 GGXHOI 381 - 5076 7896 0 2 261,2541, 0,279, -,-, 696699 Satellite W-chromosome 585 chrUn_NT_471197v1 2028 2372 CR1-F2 346 - 2028 2372 0 2 231,113, 0,231, -,-, 696701 LINE CR1 585 chrUn_NT_471198v1 1370 1778 (TTAGGG)n 630 + 1370 1778 0 2 185,197, 0,211, +,+, 696708 Simple_repeat Simple_repeat 585 chrUn_NT_471198v1 1878 2624 (TTAGGG)n 631 + 1878 2624 0 2 356,390, 0,356, +,+, 696710 Simple_repeat Simple_repeat 585 chrUn_NT_471198v1 2697 4467 (TTAGGG)n 545 + 2697 4467 0 6 220,184,31,179,383,456, 0,283,653,708,919,1314, +,+,+,+,+,+, 696712 Simple_repeat Simple_repeat 585 chrUn_NT_471198v1 4466 5895 (CCCTAA)n 600 + 4466 5895 0 7 113,169,148,174,186,199,184, 0,131,477,644,848,1034,1245, +,+,+,+,+,+,+, 696715 Simple_repeat Simple_repeat 585 chrUn_NT_471198v1 6975 7741 (CCCTAA)n 572 + 6975 7741 0 3 206,211,153, 0,231,613, +,+,+, 696720 Simple_repeat Simple_repeat 585 chrUn_NT_471199v1 6612 6712 (G)n 913 + 6612 6712 0 2 37,39, 0,61, +,+, 696734 Simple_repeat Simple_repeat 585 chrUn_NT_471199v1 6847 6950 (G)n 781 + 6847 6950 0 2 31,38, 0,65, +,+, 696735 Simple_repeat Simple_repeat 585 chrUn_NT_471200v1 2365 7500 GGXHOI 424 - 2365 7500 0 10 1136,274,435,753,428,804,391,292,225,181, 0,1152,1444,1897,2706,3174,3996,4398,4714,4954, -,-,-,-,-,-,-,-,-,-, 696738 Satellite W-chromosome 585 chrUn_NT_471203v1 5528 7135 GGXHOI 371 - 5528 7135 0 2 514,1032, 0,575, -,-, 696782 Satellite W-chromosome 585 chrUn_NT_471204v1 1366 1735 (GGATG)n 735 + 1366 1735 0 2 177,181, 0,188, +,+, 696790 Simple_repeat Simple_repeat 585 chrUn_NT_471207v1 2823 4898 CR1-B2 599 - 2823 4898 0 2 133,192, 0,1883, -,-, 696843 LINE CR1 585 chrUn_NT_471210v1 3394 6238 GGXHOI 392 - 3394 6238 0 4 263,1014,911,595, 0,289,1316,2249, -,-,-,-, 696859 Satellite W-chromosome 585 chrUn_NT_471210v1 6341 7007 GGXHOI 409 - 6341 7007 0 2 276,368, 0,298, -,-, 696860 Satellite W-chromosome 585 chrUn_NT_471212v1 4797 7870 GGXHOI 415 - 4797 7870 0 5 263,302,385,1173,844, 0,279,603,1010,2229, -,-,-,-,-, 696868 Satellite W-chromosome 585 chrUn_NT_471213v1 196 713 (CAGGA)n 317 + 196 713 0 3 96,188,62, 0,106,455, +,+,+, 696870 Simple_repeat Simple_repeat 585 chrUn_NT_471213v1 2808 4061 (AATAG)n 569 + 2808 4061 0 3 418,65,380, 0,789,873, +,+,+, 696883 Simple_repeat Simple_repeat 585 chrUn_NT_471213v1 3226 3979 (CAGAA)n 594 + 3226 3979 0 2 371,382, 0,371, +,+, 696884 Simple_repeat Simple_repeat 585 chrUn_NT_471213v1 4341 4852 (AATAG)n 556 + 4341 4852 0 2 304,23, 0,488, +,+, 696886 Simple_repeat Simple_repeat 585 chrUn_NT_471213v1 4844 5531 (CAGAA)n 606 + 4844 5531 0 2 268,242, 0,445, +,+, 696888 Simple_repeat Simple_repeat 585 chrUn_NT_471213v1 6046 6429 (AATAG)n 542 + 6046 6429 0 2 98,106, 0,277, +,+, 696892 Simple_repeat Simple_repeat 585 chrUn_NT_471215v1 888 4339 GGLTR7A 885 - 888 4339 0 2 608,2843, 0,608, -,-, 696911 LTR ERV1 585 chrUn_NT_471215v1 4339 7876 GGERV10_LTR 929 - 4339 7876 0 2 213,3324, 0,213, -,-, 696912 LTR ERVL 585 chrUn_NT_471218v1 4184 4352 CR1-H2 466 - 4184 4352 0 2 13,76, 0,92, -,-, 696944 LINE CR1 585 chrUn_NT_471219v1 2669 5082 GGERVL-B-int 684 + 2669 5082 0 2 1922,491, 0,1922, +,+, 696962 LTR ERVL 585 chrUn_NT_471219v1 5737 7132 GGLTR7-int 337 + 5737 7132 0 3 100,232,285, 0,102,1110, +,+,+, 696965 LTR ERV1 585 chrUn_NT_471220v1 3588 4615 GGXHOI 540 - 3588 4615 0 2 140,695, 0,332, -,-, 696971 Satellite W-chromosome 585 chrUn_NT_471220v1 5101 6902 GGXHOI 514 - 5101 6902 0 2 881,859, 0,942, -,-, 696975 Satellite W-chromosome 585 chrUn_NT_471221v1 3088 3580 CR1-X 478 + 3088 3580 0 3 98,133,218, 0,98,274, +,+,+, 696980 LINE CR1 585 chrUn_NT_471223v1 3526 4560 (CA)n 803 + 3526 4560 0 2 42,973, 0,61, +,+, 696996 Simple_repeat Simple_repeat 585 chrUn_NT_471224v1 1167 2106 GGXHOI 399 + 1167 2106 0 2 570,320, 0,619, +,+, 697005 Satellite W-chromosome 585 chrUn_NT_471224v1 5562 7822 GGXHOI 416 + 5562 7822 0 3 331,1233,587, 0,388,1673, +,+,+, 697009 Satellite W-chromosome 585 chrUn_NT_471225v1 3943 7858 GGXHOI 363 - 3943 7858 0 3 3406,235,221, 0,3426,3694, -,-,-, 697013 Satellite W-chromosome 585 chrUn_NT_471226v1 747 3495 CR1-H 391 + 747 3495 0 4 85,88,209,378, 0,257,2125,2370, +,+,+,+, 697015 LINE CR1 585 chrUn_NT_471226v1 5373 5994 CR1-H 376 + 5373 5994 0 2 207,378, 0,243, +,+, 697020 LINE CR1 585 chrUn_NT_471230v1 3169 3432 (CCCCATTGGG)n 455 - 3169 3432 0 2 109,114, 0,149, -,-, 697047 Satellite Satellite 585 chrUn_NT_471230v1 3503 4030 (CCCCATTGGG)n 522 - 3503 4030 0 3 114,230,113, 0,165,414, -,-,-, 697048 Satellite Satellite 585 chrUn_NT_471230v1 4312 4820 (CCCCATTGGG)n 525 - 4312 4820 0 3 229,107,109, 0,250,399, -,-,-, 697050 Satellite Satellite 585 chrUn_NT_471230v1 5716 6575 (ACCCATAGAG)n 693 + 5716 6575 0 3 351,128,73, 0,351,786, +,+,+, 697054 Satellite Satellite 585 chrUn_NT_471231v1 6366 6871 (ACCCCATAGGG)n 445 - 6366 6871 0 2 126,319, 0,186, -,-, 697066 Satellite Satellite 585 chrUn_NT_471232v1 4864 5135 (ACCCCATAGGG)n 484 - 4864 5135 0 2 115,156, 0,115, -,-, 697079 Satellite Satellite 585 chrUn_NT_471232v1 5216 5849 (ACCCCATAGGG)n 471 - 5216 5849 0 4 128,127,116,119, 0,187,335,514, -,-,-,-, 697080 Satellite Satellite 585 chrUn_NT_471232v1 6224 7177 (ACCCCATAGGG)n 464 - 6224 7177 0 5 122,180,200,223,79, 0,122,302,523,874, -,-,-,-,-, 697083 Satellite Satellite 585 chrUn_NT_471235v1 3804 4118 (ACCCCATAGGG)n 529 + 3804 4118 0 2 160,154, 0,160, +,+, 697104 Satellite Satellite 585 chrUn_NT_471235v1 4120 4422 (ACCCCATAGGG)n 591 - 4120 4422 0 2 159,143, 0,159, -,-, 697105 Satellite Satellite 585 chrUn_NT_471235v1 4816 5072 (ACCCCATAGGG)n 558 + 4816 5072 0 2 108,18, 0,238, +,+, 697108 Satellite Satellite 585 chrUn_NT_471235v1 5066 5673 (ACCCATAGAG)n 698 + 5066 5673 0 2 433,147, 0,460, +,+, 697110 Satellite Satellite 585 chrUn_NT_471235v1 6531 7656 (ACCCCATAGGG)n 627 + 6531 7656 0 3 315,136,619, 0,357,506, +,+,+, 697116 Satellite Satellite 585 chrUn_NT_471235v1 7367 7753 (CTCTATGGGG)n 572 - 7367 7753 0 2 150,117, 0,269, -,-, 697117 Satellite Satellite 585 chrUn_NT_471236v1 7172 7263 G-rich 258 + 7172 7263 0 2 47,17, 0,74, +,+, 697125 Low_complexity Low_complexity 585 chrUn_NT_471240v1 3299 4095 (ACCCCATAGGG)n 282 - 3299 4095 0 5 117,114,135,115,182, 0,166,309,474,614, -,-,-,-,-, 697172 Satellite Satellite 585 chrUn_NT_471240v1 4184 4583 (ACCCCATAGGG)n 207 - 4184 4583 0 2 239,154, 0,245, -,-, 697173 Satellite Satellite 585 chrUn_NT_471243v1 4397 5007 CR1-H 679 + 4397 5007 0 2 469,135, 0,475, +,+, 697183 LINE CR1 585 chrUn_NT_471245v1 2275 3002 GGXHOI 376 - 2275 3002 0 2 420,257, 0,470, -,-, 697194 Satellite W-chromosome 585 chrUn_NT_471245v1 3080 4324 GGXHOI 332 - 3080 4324 0 2 555,675, 0,569, -,-, 697195 Satellite W-chromosome 585 chrUn_NT_471248v1 5250 5360 G-rich 582 + 5250 5360 0 2 40,45, 0,65, +,+, 697212 Low_complexity Low_complexity 585 chrUn_NT_471248v1 5740 5875 CR1-X2 394 - 5740 5875 0 2 16,77, 0,58, -,-, 697213 LINE CR1 585 chrUn_NT_471250v1 5459 7077 GGXHOI 558 - 5459 7077 0 2 407,834, 0,784, -,-, 697229 Satellite W-chromosome 585 chrUn_NT_471254v1 712 1029 (ACCCCATAGGG)n 408 + 712 1029 0 2 156,34, 0,283, +,+, 697251 Satellite Satellite 585 chrUn_NT_471254v1 1011 1592 (ACCCCATAGGG)n 439 - 1011 1592 0 3 161,125,172, 0,161,409, -,-,-, 697253 Satellite Satellite 585 chrUn_NT_471254v1 1518 2110 (GCCCCACAGCT)n 488 + 1518 2110 0 2 132,231, 0,361, +,+, 697255 Satellite Satellite 585 chrUn_NT_471254v1 3082 3357 (CTCTATGGGG)n 470 - 3082 3357 0 2 120,120, 0,155, -,-, 697261 Satellite Satellite 585 chrUn_NT_471254v1 7094 7793 (GCCCCACAGCT)n 347 + 7094 7793 0 5 128,55,133,164,113, 0,145,214,363,586, +,+,+,+,+, 697264 Satellite Satellite 585 chrUn_NT_471255v1 2297 3292 (CAAGG)n 646 + 2297 3292 0 4 156,35,197,410, 0,328,363,585, +,+,+,+, 697274 Simple_repeat Simple_repeat 585 chrUn_NT_471255v1 3372 4334 (CAAGG)n 622 + 3372 4334 0 3 293,44,227, 0,478,735, +,+,+, 697277 Simple_repeat Simple_repeat 585 chrUn_NT_471255v1 4357 4761 (CAAGG)n 600 + 4357 4761 0 2 177,227, 0,177, +,+, 697281 Simple_repeat Simple_repeat 585 chrUn_NT_471255v1 5279 5787 (CAAGG)n 610 + 5279 5787 0 2 100,126, 0,382, +,+, 697285 Simple_repeat Simple_repeat 585 chrUn_NT_471255v1 5851 6588 (CAAGG)n 618 + 5851 6588 0 2 439,123, 0,614, +,+, 697289 Simple_repeat Simple_repeat 585 chrUn_NT_471255v1 6904 7616 (CAAGG)n 529 + 6904 7616 0 3 177,285,56, 0,195,656, +,+,+, 697293 Simple_repeat Simple_repeat 585 chrUn_NT_471256v1 2282 7831 GGXHOI 414 - 2282 7831 0 6 956,1692,175,425,1712,461, 0,980,2685,2895,3333,5088, -,-,-,-,-,-, 697299 Satellite W-chromosome 585 chrUn_NT_471258v1 1423 1844 GGXHOI 305 - 1423 1844 0 2 173,198, 0,223, -,-, 697305 Satellite W-chromosome 585 chrUn_NT_471258v1 1954 4173 GGXHOI 399 - 1954 4173 0 5 364,379,331,333,656, 0,426,833,1206,1563, -,-,-,-,-, 697306 Satellite W-chromosome 585 chrUn_NT_471258v1 4587 7829 GGXHOI 388 - 4587 7829 0 5 390,264,490,774,1219, 0,419,726,1233,2023, -,-,-,-,-, 697308 Satellite W-chromosome 585 chrUn_NT_471259v1 766 7821 GGXHOI 388 - 766 7821 0 2 1232,5809, 0,1246, -,-, 697310 Satellite W-chromosome 585 chrUn_NT_471261v1 3895 6602 GGXHOI 388 + 3895 6602 0 3 1126,486,997, 0,1174,1710, +,+,+, 697313 Satellite W-chromosome 585 chrUn_NT_471261v1 6673 7826 GGXHOI 413 + 6673 7826 0 2 447,692, 0,461, +,+, 697314 Satellite W-chromosome 585 chrUn_NT_471263v1 1285 1439 CR1-H2 472 + 1285 1439 0 2 82,72, 0,82, +,+, 697326 LINE CR1 585 chrUn_NT_471263v1 3285 5663 CR1-F2 523 + 3285 5663 0 3 73,82,74, 0,1985,2304, +,+,+, 697333 LINE CR1 585 chrUn_NT_471264v1 4330 5621 GGXHOI 358 - 4330 5621 0 3 341,362,505, 0,387,786, -,-,-, 697346 Satellite W-chromosome 585 chrUn_NT_471264v1 6180 6539 GGXHOI 401 - 6180 6539 0 2 196,136, 0,223, -,-, 697348 Satellite W-chromosome 585 chrUn_NT_471266v1 1627 4821 GGXHOI 361 - 1627 4821 0 7 138,417,149,297,893,212,915, 0,154,618,788,1108,2016,2279, -,-,-,-,-,-,-, 697356 Satellite W-chromosome 585 chrUn_NT_471266v1 4885 6056 GGXHOI 358 - 4885 6056 0 2 744,379, 0,792, -,-, 697357 Satellite W-chromosome 585 chrUn_NT_471267v1 591 733 (ACCCATTGGG)n 396 + 591 733 0 2 45,40, 0,102, +,+, 697361 Satellite Satellite 585 chrUn_NT_471267v1 1640 1948 (CCCCATTGGG)n 475 + 1640 1948 0 2 33,62, 0,246, +,+, 697366 Satellite Satellite 585 chrUn_NT_471268v1 752 1503 (CGAGG)n 523 + 752 1503 0 3 182,328,178, 0,200,573, +,+,+, 697373 Simple_repeat Simple_repeat 585 chrUn_NT_471268v1 2055 2432 (CGAGG)n 565 + 2055 2432 0 2 174,180, 0,197, +,+, 697377 Simple_repeat Simple_repeat 585 chrUn_NT_471268v1 2872 3441 (CGAGG)n 538 + 2872 3441 0 2 181,372, 0,197, +,+, 697383 Simple_repeat Simple_repeat 585 chrUn_NT_471268v1 4873 5488 (CGAGG)n 516 + 4873 5488 0 2 329,105, 0,510, +,+, 697388 Simple_repeat Simple_repeat 585 chrUn_NT_471268v1 6247 7131 (CGAGG)n 526 + 6247 7131 0 2 481,377, 0,507, +,+, 697393 Simple_repeat Simple_repeat 585 chrUn_NT_471268v1 7229 7814 (CGAGG)n 567 + 7229 7814 0 3 105,73,180, 0,290,405, +,+,+, 697395 Simple_repeat Simple_repeat 585 chrUn_NT_471269v1 4242 4470 A-rich 375 + 4242 4470 0 2 111,72, 0,156, +,+, 697399 Low_complexity Low_complexity 585 chrUn_NT_471270v1 1753 3992 GGXHOI 373 - 1753 3992 0 3 813,476,886, 0,829,1353, -,-,-, 697403 Satellite W-chromosome 585 chrUn_NT_471270v1 4058 5020 GGXHOI 302 - 4058 5020 0 2 801,125, 0,837, -,-, 697404 Satellite W-chromosome 585 chrUn_NT_471270v1 5709 7245 GGXHOI 366 - 5709 7245 0 4 575,163,314,367, 0,618,800,1169, -,-,-,-, 697406 Satellite W-chromosome 585 chrUn_NT_471271v1 858 1416 (CAGGC)n 544 + 858 1416 0 2 258,121, 0,437, +,+, 697410 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 1460 2206 (CAAGG)n 620 + 1460 2206 0 3 179,125,210, 0,411,536, +,+,+, 697413 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 2094 2510 (CAGGC)n 490 + 2094 2510 0 2 188,217, 0,199, +,+, 697415 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 2722 4038 (CAGGC)n 538 + 2722 4038 0 3 233,18,460, 0,655,856, +,+,+, 697419 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 2955 3377 (CAAGG)n 576 + 2955 3377 0 2 175,61, 0,361, +,+, 697420 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 4580 4955 (CAGGC)n 598 + 4580 4955 0 2 101,97, 0,278, +,+, 697427 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 4681 5057 (CAAGG)n 690 + 4681 5057 0 2 177,199, 0,177, +,+, 697428 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 5104 6606 (CAAGG)n 620 + 5104 6606 0 5 352,29,208,159,220, 0,696,736,1123,1282, +,+,+,+,+, 697430 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 5456 5994 (CAGGC)n 452 + 5456 5994 0 2 344,194, 0,344, +,+, 697431 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 6859 7442 (CAAGG)n 612 + 6859 7442 0 2 179,363, 0,220, +,+, 697436 Simple_repeat Simple_repeat 585 chrUn_NT_471271v1 7457 7805 (CAGGC)n 410 + 7457 7805 0 2 68,254, 0,94, +,+, 697437 Simple_repeat Simple_repeat 585 chrUn_NT_471272v1 769 7811 GGXHOI 533 + 769 7811 0 13 518,370,224,296,194,297,194,297,223,219,253,49,483, 0,842,1535,2054,2747,3264,3957,4475,5169,5669,5918,6217,6559, +,+,+,+,+,+,+,+,+,+,+,+,+, 697441 Satellite W-chromosome 585 chrUn_NT_471273v1 1086 1462 (CAAGG)n 565 + 1086 1462 0 2 180,196, 0,180, +,+, 697453 Simple_repeat Simple_repeat 585 chrUn_NT_471273v1 2957 3481 (CAAGG)n 574 + 2957 3481 0 2 266,74, 0,450, +,+, 697463 Simple_repeat Simple_repeat 585 chrUn_NT_471275v1 661 1174 (CAAGG)n 436 + 661 1174 0 2 195,129, 0,384, +,+, 697477 Simple_repeat Simple_repeat 585 chrUn_NT_471275v1 1125 2273 (CGAGG)n 571 + 1125 2273 0 3 189,391,520, 0,204,628, +,+,+, 697479 Simple_repeat Simple_repeat 585 chrUn_NT_471275v1 2240 3048 (CGAGG)n 592 + 2240 3048 0 3 312,184,50, 0,312,758, +,+,+, 697481 Simple_repeat Simple_repeat 585 chrUn_NT_471275v1 3150 4356 (CGAGG)n 552 + 3150 4356 0 3 500,209,303, 0,511,903, +,+,+, 697485 Simple_repeat Simple_repeat 585 chrUn_NT_471275v1 5381 6158 (CGAGG)n 616 + 5381 6158 0 3 119,67,411, 0,299,366, +,+,+, 697492 Simple_repeat Simple_repeat 585 chrUn_NT_471275v1 6983 7802 (CGAGG)n 489 + 6983 7802 0 4 189,178,112,108, 0,229,407,711, +,+,+,+, 697499 Simple_repeat Simple_repeat 585 chrUn_NT_471278v1 643 2349 GGXHOI 334 - 643 2349 0 3 658,221,756, 0,673,950, -,-,-, 697543 Satellite W-chromosome 585 chrUn_NT_471278v1 3748 4258 GGXHOI 340 - 3748 4258 0 2 316,136, 0,374, -,-, 697546 Satellite W-chromosome 585 chrUn_NT_471278v1 4780 5261 GGXHOI 280 - 4780 5261 0 2 228,233, 0,248, -,-, 697548 Satellite W-chromosome 585 chrUn_NT_471278v1 6980 7481 GGXHOI 337 - 6980 7481 0 2 132,330, 0,171, -,-, 697551 Satellite W-chromosome 585 chrUn_NT_471280v1 2129 2776 CR1-H 601 - 2129 2776 0 2 142,499, 0,148, -,-, 697554 LINE CR1 585 chrUn_NT_471280v1 5570 6837 CR1-H 682 - 5570 6837 0 2 76,1160, 0,107, -,-, 697559 LINE CR1 585 chrUn_NT_471281v1 318 1091 (ACCCCATAGGG)n 555 + 318 1091 0 3 462,44,124, 0,583,649, +,+,+, 697561 Satellite Satellite 585 chrUn_NT_471281v1 1501 1850 (ACCCCATAGGG)n 544 + 1501 1850 0 2 121,228, 0,121, +,+, 697566 Satellite Satellite 585 chrUn_NT_471282v1 660 1670 GGXHOI 393 - 660 1670 0 5 142,260,179,134,138, 0,155,468,688,872, -,-,-,-,-, 697571 Satellite W-chromosome 585 chrUn_NT_471282v1 1778 2648 GGXHOI 305 - 1778 2648 0 3 457,202,153, 0,471,717, -,-,-, 697572 Satellite W-chromosome 585 chrUn_NT_471282v1 3245 3873 GGXHOI 405 - 3245 3873 0 2 443,153, 0,475, -,-, 697575 Satellite W-chromosome 585 chrUn_NT_471282v1 3948 6968 GGXHOI 373 - 3948 6968 0 9 286,447,131,174,361,543,444,331,137, 0,318,784,929,1114,1520,2076,2537,2883, -,-,-,-,-,-,-,-,-, 697576 Satellite W-chromosome 585 chrUn_NT_471282v1 7075 7458 GGXHOI 345 - 7075 7458 0 2 132,210, 0,173, -,-, 697577 Satellite W-chromosome 585 chrUn_NT_471286v1 4809 5615 GGXHOI 345 - 4809 5615 0 2 617,147, 0,659, -,-, 697616 Satellite W-chromosome 585 chrUn_NT_471287v1 406 2417 (CGAGG)n 441 + 406 2417 0 2 509,1449, 0,562, +,+, 697623 Simple_repeat Simple_repeat 585 chrUn_NT_471287v1 2938 3451 (CGAGG)n 490 + 2938 3451 0 2 305,188, 0,325, +,+, 697627 Simple_repeat Simple_repeat 585 chrUn_NT_471287v1 4664 6284 (CGAGG)n 467 + 4664 6284 0 3 1003,243,307, 0,1059,1313, +,+,+, 697633 Simple_repeat Simple_repeat 585 chrUn_NT_471291v1 6568 7380 CR1-B2 644 - 6568 7380 0 3 374,111,205, 0,493,607, -,-,-, 697662 LINE CR1 585 chrUn_NT_471294v1 1947 2113 (ACTCC)n 166 + 1947 2113 0 2 27,85, 0,81, +,+, 697678 Simple_repeat Simple_repeat 585 chrUn_NT_471294v1 6376 6554 (CACTC)n 220 + 6376 6554 0 2 58,83, 0,95, +,+, 697690 Simple_repeat Simple_repeat 585 chrUn_NT_471294v1 7239 7772 (TCCTC)n 256 + 7239 7772 0 3 16,80,297, 0,131,236, +,+,+, 697695 Simple_repeat Simple_repeat 585 chrUn_NT_471295v1 2935 3350 (GCCCCACAGCT)n 411 - 2935 3350 0 2 127,233, 0,182, -,-, 697701 Satellite Satellite 585 chrUn_NT_471295v1 3655 4065 (GCCCCACAGCT)n 425 - 3655 4065 0 2 259,121, 0,289, -,-, 697703 Satellite Satellite 585 chrUn_NT_471296v1 3777 4394 CR1-H 676 - 3777 4394 0 2 139,472, 0,145, -,-, 697711 LINE CR1 585 chrUn_NT_471296v1 7404 7788 CR1-H 643 - 7404 7788 0 2 163,221, 0,163, -,-, 697715 LINE CR1 585 chrUn_NT_471297v1 1291 1908 (TTAGGG)n 618 + 1291 1908 0 2 304,114, 0,503, +,+, 697721 Simple_repeat Simple_repeat 585 chrUn_NT_471298v1 7647 7781 A-rich 487 + 7647 7781 0 2 73,30, 0,104, +,+, 697729 Low_complexity Low_complexity 585 chrUn_NT_471299v1 794 2610 GGXHOI 559 - 794 2610 0 2 331,1444, 0,372, -,-, 697731 Satellite W-chromosome 585 chrUn_NT_471303v1 1667 2269 GGXHOI 412 - 1667 2269 0 2 137,448, 0,154, -,-, 697756 Satellite W-chromosome 585 chrUn_NT_471303v1 2594 3630 GGXHOI 352 - 2594 3630 0 2 121,899, 0,137, -,-, 697757 Satellite W-chromosome 585 chrUn_NT_471303v1 3732 5357 GGXHOI 365 - 3732 5357 0 4 322,610,451,168, 0,336,964,1457, -,-,-,-, 697758 Satellite W-chromosome 585 chrUn_NT_471303v1 7019 7781 GGXHOI 408 - 7019 7781 0 2 351,355, 0,407, -,-, 697760 Satellite W-chromosome 585 chrUn_NT_471305v1 1282 7761 GGXHOI 390 + 1282 7761 0 5 879,1731,1279,1722,792, 0,901,2648,3949,5687, +,+,+,+,+, 697763 Satellite W-chromosome 585 chrUn_NT_471306v1 3572 5124 GGXHOI 518 - 3572 5124 0 3 441,231,215, 0,801,1337, -,-,-, 697768 Satellite W-chromosome 585 chrUn_NT_471306v1 5152 7777 GGXHOI 530 - 5152 7777 0 2 1545,22, 0,2603, -,-, 697772 Satellite W-chromosome 585 chrUn_NT_471307v1 2420 5758 GGXHOI 436 - 2420 5758 0 5 1150,1052,223,643,152, 0,1173,2242,2497,3186, -,-,-,-,-, 697775 Satellite W-chromosome 585 chrUn_NT_471307v1 5983 7755 GGXHOI 392 - 5983 7755 0 3 976,180,566, 0,994,1206, -,-,-, 697776 Satellite W-chromosome 585 chrUn_NT_471308v1 753 1499 GGXHOI 558 - 753 1499 0 2 201,199, 0,547, -,-, 697778 Satellite W-chromosome 585 chrUn_NT_471308v1 2263 3432 GGXHOI 421 - 2263 3432 0 3 209,567,315, 0,245,854, -,-,-, 697781 Satellite W-chromosome 585 chrUn_NT_471308v1 5153 6429 GGXHOI 502 - 5153 6429 0 3 567,307,352, 0,592,924, -,-,-, 697785 Satellite W-chromosome 585 chrUn_NT_471308v1 6608 7777 GGXHOI 475 - 6608 7777 0 3 164,449,344, 0,177,825, -,-,-, 697787 Satellite W-chromosome 585 chrUn_NT_471309v1 4162 5400 GGLTR7-int 646 + 4162 5400 0 2 336,434, 0,804, +,+, 697794 LTR ERV1 585 chrUn_NT_471309v1 5637 7774 GGLTR10D-int 829 - 5637 7774 0 4 362,1458,145,137, 0,365,1823,2000, -,-,-,-, 697796 LTR ERVK 585 chrUn_NT_471310v1 3067 5905 GGXHOI 447 - 3067 5905 0 6 605,134,184,465,1175,155, 0,617,774,1003,1484,2683, -,-,-,-,-,-, 697799 Satellite W-chromosome 585 chrUn_NT_471310v1 5975 7771 GGXHOI 419 - 5975 7771 0 2 866,892, 0,904, -,-, 697800 Satellite W-chromosome 585 chrUn_NT_471311v1 1895 2987 (CGAGG)n 502 + 1895 2987 0 2 577,503, 0,589, +,+, 697804 Simple_repeat Simple_repeat 585 chrUn_NT_471311v1 3082 4290 (CGAGG)n 528 + 3082 4290 0 2 731,438, 0,770, +,+, 697805 Simple_repeat Simple_repeat 585 chrUn_NT_471311v1 4594 7475 (CGAGG)n 524 + 4594 7475 0 5 179,354,131,318,1681, 0,205,576,881,1200, +,+,+,+,+, 697806 Simple_repeat Simple_repeat 585 chrUn_NT_471311v1 7478 7751 (GGCGG)n 240 + 7478 7751 0 2 167,57, 0,216, +,+, 697808 Simple_repeat Simple_repeat 585 chrUn_NT_471312v1 6127 7769 GGXHOI 395 - 6127 7769 0 2 712,918, 0,724, -,-, 697815 Satellite W-chromosome 585 chrUn_NT_471316v1 3609 4137 (GCCCCACAGCT)n 452 - 3609 4137 0 2 129,378, 0,150, -,-, 697845 Satellite Satellite 585 chrUn_NT_471316v1 4393 4680 (GCCCCACAGCT)n 479 - 4393 4680 0 2 120,131, 0,156, -,-, 697846 Satellite Satellite 585 chrUn_NT_471318v1 2698 3081 (CATGC)n 240 + 2698 3081 0 2 198,174, 0,209, +,+, 697868 Simple_repeat Simple_repeat 585 chrUn_NT_471318v1 3231 3891 (CATGC)n 237 + 3231 3891 0 3 191,216,195, 0,219,465, +,+,+, 697869 Simple_repeat Simple_repeat 585 chrUn_NT_471320v1 3061 3493 A-rich 261 + 3061 3493 0 2 122,270, 0,162, +,+, 697881 Low_complexity Low_complexity 585 chrUn_NT_471321v1 1901 5310 GGXHOI 572 - 1901 5310 0 2 1173,1673, 0,1736, -,-, 697892 Satellite W-chromosome 585 chrUn_NT_471321v1 5330 7374 GGXHOI 505 - 5330 7374 0 4 474,108,278,323, 0,927,1077,1721, -,-,-,-, 697895 Satellite W-chromosome 585 chrUn_NT_471323v1 726 2439 GGXHOI 588 - 726 2439 0 4 163,243,204,628, 0,205,459,1085, -,-,-,-, 697902 Satellite W-chromosome 585 chrUn_NT_471323v1 3157 7013 GGXHOI 564 - 3157 7013 0 4 402,317,555,580, 0,1068,2057,3276, -,-,-,-, 697905 Satellite W-chromosome 585 chrUn_NT_471331v1 878 1054 G-rich 512 + 878 1054 0 2 44,82, 0,94, +,+, 698011 Low_complexity Low_complexity 585 chrUn_NT_471331v1 7149 7744 (TG)n 519 + 7149 7744 0 2 180,384, 0,211, +,+, 698023 Simple_repeat Simple_repeat 585 chrUn_NT_471332v1 909 2651 GGLTR7-int 653 - 909 2651 0 3 33,73,1083, 0,37,659, -,-,-, 698026 LTR ERV1 585 chrUn_NT_471337v1 121 494 (CCTTG)n 639 + 121 494 0 2 177,185, 0,188, +,+, 698058 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 862 1229 (GCCTG)n 500 + 862 1229 0 2 107,81, 0,286, +,+, 698060 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 1544 2155 (CCTTG)n 541 + 1544 2155 0 3 181,175,222, 0,206,389, +,+,+, 698064 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 2439 3088 (CCTTG)n 595 + 2439 3088 0 2 194,436, 0,213, +,+, 698065 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 3382 4098 (CCTTG)n 628 + 3382 4098 0 3 190,259,83, 0,198,633, +,+,+, 698069 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 3839 4220 (GCCTG)n 550 + 3839 4220 0 2 176,205, 0,176, +,+, 698070 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 4194 5431 (CCTTG)n 580 + 4194 5431 0 5 338,72,134,31,191, 0,513,609,961,1046, +,+,+,+,+, 698071 Simple_repeat Simple_repeat 585 chrUn_NT_471337v1 6086 7693 (CCTTG)n 594 + 6086 7693 0 7 406,23,103,200,123,15,25, 0,579,780,883,1083,1383,1582, +,+,+,+,+,+,+, 698076 Simple_repeat Simple_repeat 585 chrUn_NT_471338v1 623 1223 G-rich 479 + 623 1223 0 2 38,501, 0,99, +,+, 698084 Low_complexity Low_complexity 585 chrUn_NT_471340v1 362 3033 GGXHOI 380 + 362 3033 0 10 457,142,128,260,247,134,130,216,493,134, 0,499,689,832,1111,1411,1589,1771,2025,2537, +,+,+,+,+,+,+,+,+,+, 698095 Satellite W-chromosome 585 chrUn_NT_471340v1 3285 3724 GGXHOI 286 + 3285 3724 0 3 161,87,167, 0,174,272, +,+,+, 698097 Satellite W-chromosome 585 chrUn_NT_471340v1 3847 4887 GGXHOI 463 + 3847 4887 0 5 141,215,64,257,284, 0,155,410,485,756, +,+,+,+,+, 698098 Satellite W-chromosome 585 chrUn_NT_471340v1 5001 5762 GGXHOI 389 + 5001 5762 0 4 140,163,221,148, 0,155,336,613, +,+,+,+, 698099 Satellite W-chromosome 585 chrUn_NT_471340v1 5842 7741 GGXHOI 402 + 5842 7741 0 6 553,138,273,255,332,206, 0,571,722,1008,1307,1693, +,+,+,+,+,+, 698100 Satellite W-chromosome 585 chrUn_NT_471342v1 269 780 (GCCTG)n 452 + 269 780 0 2 74,260, 0,251, +,+, 698106 Simple_repeat Simple_repeat 585 chrUn_NT_471342v1 841 1285 (CCTTG)n 674 + 841 1285 0 2 211,182, 0,262, +,+, 698109 Simple_repeat Simple_repeat 585 chrUn_NT_471342v1 1236 2169 (GCCTG)n 522 + 1236 2169 0 3 132,27,366, 0,314,567, +,+,+, 698110 Simple_repeat Simple_repeat 585 chrUn_NT_471342v1 2600 4506 (CCTTG)n 641 + 2600 4506 0 7 180,130,26,27,214,376,267, 0,180,489,693,720,934,1639, +,+,+,+,+,+,+, 698117 Simple_repeat Simple_repeat 585 chrUn_NT_471342v1 4425 5228 (GCCTG)n 522 + 4425 5228 0 3 132,27,246, 0,314,557, +,+,+, 698121 Simple_repeat Simple_repeat 585 chrUn_NT_471342v1 5353 6695 (CCTTG)n 555 + 5353 6695 0 5 144,152,187,47,377, 0,456,644,868,965, +,+,+,+,+, 698126 Simple_repeat Simple_repeat 585 chrUn_NT_471342v1 6820 7588 (CCTTG)n 584 + 6820 7588 0 2 322,427, 0,341, +,+, 698130 Simple_repeat Simple_repeat 585 chrUn_NT_471344v1 2108 2351 (CCCCATTGGG)n 420 - 2108 2351 0 2 118,113, 0,130, -,-, 698136 Satellite Satellite 585 chrUn_NT_471344v1 2809 3841 (CCCCATTGGG)n 430 - 2809 3841 0 6 116,114,222,87,239,87, 0,147,307,557,656,945, -,-,-,-,-,-, 698138 Satellite Satellite 585 chrUn_NT_471345v1 896 2115 GGXHOI 372 - 896 2115 0 3 406,396,301, 0,466,918, -,-,-, 698147 Satellite W-chromosome 585 chrUn_NT_471345v1 4538 5053 GGXHOI 323 - 4538 5053 0 2 298,185, 0,330, -,-, 698151 Satellite W-chromosome 585 chrUn_NT_471348v1 4570 5043 Sat-CR1_GG 140 - 4570 5043 0 2 128,137, 0,336, -,-, 698172 Satellite Satellite 585 chrUn_NT_471348v1 7195 7722 Sat-CR1_GG 182 - 7195 7722 0 2 125,159, 0,368, -,-, 698179 Satellite Satellite 585 chrUn_NT_471349v1 1383 7729 GGXHOI 351 + 1383 7729 0 4 1653,525,2669,1456, 0,1670,2209,4890, +,+,+,+, 698183 Satellite W-chromosome 585 chrUn_NT_471351v1 330 808 (CGAGG)n 610 + 330 808 0 2 242,236, 0,242, +,+, 698192 Simple_repeat Simple_repeat 585 chrUn_NT_471351v1 2444 3782 (CGAGG)n 520 + 2444 3782 0 5 188,119,202,198,182, 0,243,546,933,1156, +,+,+,+,+, 698203 Simple_repeat Simple_repeat 585 chrUn_NT_471351v1 3821 4451 (CGAGG)n 620 + 3821 4451 0 2 252,45, 0,585, +,+, 698207 Simple_repeat Simple_repeat 585 chrUn_NT_471351v1 4393 5011 (CAAGG)n 452 + 4393 5011 0 2 150,282, 0,336, +,+, 698210 Simple_repeat Simple_repeat 585 chrUn_NT_471351v1 4752 5773 (CGAGG)n 577 + 4752 5773 0 3 364,92,355, 0,541,666, +,+,+, 698212 Simple_repeat Simple_repeat 585 chrUn_NT_471351v1 6209 6591 (CCTCG)n 579 + 6209 6591 0 2 177,181, 0,201, +,+, 698218 Simple_repeat Simple_repeat 585 chrUn_NT_471352v1 351 4868 GGXHOI 377 - 351 4868 0 12 242,349,373,176,359,212,331,451,593,398,556,131, 0,258,621,1035,1247,1619,1879,2266,2733,3365,3812,4386, -,-,-,-,-,-,-,-,-,-,-,-, 698223 Satellite W-chromosome 585 chrUn_NT_471352v1 5163 7687 GGXHOI 398 - 5163 7687 0 7 696,125,241,245,532,305,181, 0,744,910,1175,1435,1998,2343, -,-,-,-,-,-,-, 698225 Satellite W-chromosome 585 chrUn_NT_471353v1 2249 2492 Char12Mar1_GG 498 - 2249 2492 0 2 72,171, 0,72, -,-, 698228 DNA hAT-Charlie 585 chrUn_NT_471354v1 1261 2097 (CCTTG)n 503 + 1261 2097 0 3 56,568,177, 0,78,659, +,+,+, 698232 Simple_repeat Simple_repeat 585 chrUn_NT_471354v1 2136 5097 GGXHOI 345 - 2136 5097 0 4 1192,667,597,412, 0,1207,1931,2549, -,-,-,-, 698233 Satellite W-chromosome 585 chrUn_NT_471354v1 6495 7534 GGXHOI 347 - 6495 7534 0 2 472,509, 0,530, -,-, 698235 Satellite W-chromosome 585 chrUn_NT_471355v1 240 651 (CCTTG)n 504 + 240 651 0 2 193,185, 0,226, +,+, 698238 Simple_repeat Simple_repeat 585 chrUn_NT_471355v1 935 1363 (CCTTG)n 595 + 935 1363 0 2 189,204, 0,224, +,+, 698240 Simple_repeat Simple_repeat 585 chrUn_NT_471355v1 1433 2252 (CCTTG)n 620 + 1433 2252 0 4 225,171,141,21, 0,257,478,798, +,+,+,+, 698242 Simple_repeat Simple_repeat 585 chrUn_NT_471355v1 2374 3572 (CCTTG)n 551 + 2374 3572 0 3 200,184,381, 0,633,817, +,+,+, 698245 Simple_repeat Simple_repeat 585 chrUn_NT_471355v1 3803 4333 (GCCTG)n 502 + 3803 4333 0 2 145,53, 0,477, +,+, 698249 Simple_repeat Simple_repeat 585 chrUn_NT_471355v1 4292 4937 (CCTTG)n 613 + 4292 4937 0 2 251,381, 0,264, +,+, 698251 Simple_repeat Simple_repeat 585 chrUn_NT_471355v1 5017 7245 (CCTTG)n 581 + 5017 7245 0 8 369,345,183,261,156,221,31,186, 0,397,758,943,1222,1378,1976,2042, +,+,+,+,+,+,+,+, 698253 Simple_repeat Simple_repeat 585 chrUn_NT_471356v1 774 1224 (ACCCATAGAG)n 644 - 774 1224 0 2 214,120, 0,330, -,-, 698259 Satellite Satellite 585 chrUn_NT_471356v1 1605 1855 (ACCCATAGGG)n 676 - 1605 1855 0 2 110,20, 0,230, -,-, 698263 Satellite Satellite 585 chrUn_NT_471356v1 1990 2214 (ACCCATAGGG)n 642 - 1990 2214 0 2 85,20, 0,204, -,-, 698266 Satellite Satellite 585 chrUn_NT_471356v1 2224 2664 (ACCCATTGGG)n 644 - 2224 2664 0 3 144,30,150, 0,260,290, -,-,-, 698268 Satellite Satellite 585 chrUn_NT_471356v1 3639 5522 (ACCCATAGGG)n 552 - 3639 5522 0 6 84,172,64,112,64,1267, 0,84,376,440,552,616, -,-,-,-,-,-, 698275 Satellite Satellite 585 chrUn_NT_471357v1 972 1424 (ACCCCATAGGG)n 333 + 972 1424 0 3 122,133,130, 0,142,322, +,+,+, 698281 Satellite Satellite 585 chrUn_NT_471357v1 1846 2631 (ACCCCATAGGG)n 445 + 1846 2631 0 5 142,107,114,116,131, 0,180,349,525,654, +,+,+,+,+, 698284 Satellite Satellite 585 chrUn_NT_471357v1 3841 4444 (ACCCCATAGGG)n 306 + 3841 4444 0 4 94,16,19,180, 0,215,355,423, +,+,+,+, 698290 Satellite Satellite 585 chrUn_NT_471357v1 3935 4196 (ACCCATAGGG)n 288 - 3935 4196 0 2 121,124, 0,137, -,-, 698291 Satellite Satellite 585 chrUn_NT_471357v1 7159 7625 (CCCCATTGGG)n 454 + 7159 7625 0 2 103,246, 0,220, +,+, 698302 Satellite Satellite 585 chrUn_NT_471357v1 7262 7701 (ACCCATTGGG)n 609 + 7262 7701 0 2 117,288, 0,151, +,+, 698303 Satellite Satellite 585 chrUn_NT_471361v1 2953 6422 GGXHOI 363 - 2953 6422 0 10 275,403,609,134,461,178,308,402,361,129, 0,292,715,1358,1525,2000,2194,2518,2963,3340, -,-,-,-,-,-,-,-,-,-, 698343 Satellite W-chromosome 585 chrUn_NT_471361v1 6487 7704 GGXHOI 418 - 6487 7704 0 2 881,293, 0,924, -,-, 698344 Satellite W-chromosome 585 chrUn_NT_471365v1 2946 4087 CR1-F 720 + 2946 4087 0 2 337,281, 0,860, +,+, 698354 LINE CR1 585 chrUn_NT_471366v1 1074 2763 (CGAGG)n 583 + 1074 2763 0 3 938,321,38, 0,971,1651, +,+,+, 698360 Simple_repeat Simple_repeat 585 chrUn_NT_471366v1 2837 4451 (CGAGG)n 550 + 2837 4451 0 4 369,30,180,602, 0,727,807,1012, +,+,+,+, 698363 Simple_repeat Simple_repeat 585 chrUn_NT_471366v1 5106 7701 (CGAGG)n 569 + 5106 7701 0 4 371,749,1005,88, 0,386,1160,2507, +,+,+,+, 698370 Simple_repeat Simple_repeat 585 chrUn_NT_471367v1 1152 1938 GGXHOI 391 + 1152 1938 0 2 282,478, 0,308, +,+, 698374 Satellite W-chromosome 585 chrUn_NT_471367v1 2064 3432 GGXHOI 432 + 2064 3432 0 2 451,900, 0,468, +,+, 698375 Satellite W-chromosome 585 chrUn_NT_471367v1 3530 6424 GGXHOI 400 + 3530 6424 0 2 443,2431, 0,463, +,+, 698376 Satellite W-chromosome 585 chrUn_NT_471367v1 6509 7253 GGXHOI 363 + 6509 7253 0 2 454,267, 0,477, +,+, 698377 Satellite W-chromosome 585 chrUn_NT_471368v1 1363 3592 GGXHOI 425 - 1363 3592 0 5 677,139,135,1083,64, 0,689,872,1056,2165, -,-,-,-,-, 698382 Satellite W-chromosome 585 chrUn_NT_471368v1 3685 5900 GGXHOI 418 - 3685 5900 0 6 333,205,779,299,281,215, 0,351,572,1367,1705,2000, -,-,-,-,-,-, 698383 Satellite W-chromosome 585 chrUn_NT_471368v1 5993 7697 GGXHOI 380 - 5993 7697 0 2 1147,542, 0,1162, -,-, 698384 Satellite W-chromosome 585 chrUn_NT_471371v1 1669 2916 (TTAGGG)n 591 + 1669 2916 0 3 829,214,204, 0,829,1043, +,+,+, 698406 Simple_repeat Simple_repeat 585 chrUn_NT_471371v1 2940 3573 (TTAGGG)n 457 + 2940 3573 0 3 178,202,197, 0,208,436, +,+,+, 698408 Simple_repeat Simple_repeat 585 chrUn_NT_471371v1 3847 4886 (CCCTAA)n 636 + 3847 4886 0 2 731,290, 0,749, +,+, 698410 Simple_repeat Simple_repeat 585 chrUn_NT_471371v1 5347 6282 (CCCTAA)n 622 + 5347 6282 0 3 353,118,267, 0,368,668, +,+,+, 698414 Simple_repeat Simple_repeat 585 chrUn_NT_471371v1 6450 7679 (CCCTAA)n 618 + 6450 7679 0 4 364,144,178,75, 0,398,770,1154, +,+,+,+, 698417 Simple_repeat Simple_repeat 585 chrUn_NT_471372v1 2399 3095 (CGAGG)n 526 + 2399 3095 0 3 180,282,182, 0,212,514, +,+,+, 698425 Simple_repeat Simple_repeat 585 chrUn_NT_471372v1 4314 5173 (CGAGG)n 553 + 4314 5173 0 3 179,178,391, 0,235,468, +,+,+, 698431 Simple_repeat Simple_repeat 585 chrUn_NT_471372v1 5648 6039 (CGAGG)n 535 + 5648 6039 0 2 176,172, 0,219, +,+, 698435 Simple_repeat Simple_repeat 585 chrUn_NT_471374v1 1760 2382 CR1-H 675 - 1760 2382 0 2 139,477, 0,145, -,-, 698443 LINE CR1 585 chrUn_NT_471374v1 4577 5034 CR1-H 679 - 4577 5034 0 2 163,294, 0,163, -,-, 698446 LINE CR1 585 chrUn_NT_471376v1 450 714 (CTCTATGGGG)n 810 + 450 714 0 2 82,60, 0,204, +,+, 698458 Satellite Satellite 585 chrUn_NT_471377v1 1018 2181 (CAAGG)n 581 + 1018 2181 0 4 189,183,140,385, 0,244,458,778, +,+,+,+, 698479 Simple_repeat Simple_repeat 585 chrUn_NT_471377v1 2605 3162 (CAAGG)n 612 + 2605 3162 0 2 228,149, 0,408, +,+, 698485 Simple_repeat Simple_repeat 585 chrUn_NT_471377v1 3710 4561 (CAAGG)n 587 + 3710 4561 0 3 187,194,272, 0,207,579, +,+,+, 698490 Simple_repeat Simple_repeat 585 chrUn_NT_471377v1 4920 5402 (CAAGG)n 600 + 4920 5402 0 2 189,289, 0,193, +,+, 698495 Simple_repeat Simple_repeat 585 chrUn_NT_471377v1 5868 6652 (CAAGG)n 587 + 5868 6652 0 3 367,173,198, 0,413,586, +,+,+, 698499 Simple_repeat Simple_repeat 585 chrUn_NT_471377v1 6557 6893 (CAGGC)n 448 + 6557 6893 0 2 107,49, 0,287, +,+, 698500 Simple_repeat Simple_repeat 585 chrUn_NT_471377v1 6888 7673 (CAAGG)n 534 + 6888 7673 0 3 209,146,227, 0,224,558, +,+,+, 698502 Simple_repeat Simple_repeat 585 chrUn_NT_471379v1 1153 5495 GGXHOI 414 - 1153 5495 0 9 161,145,319,591,224,175,672,1363,463, 0,175,342,685,1316,1556,1784,2487,3879, -,-,-,-,-,-,-,-,-, 698508 Satellite W-chromosome 585 chrUn_NT_471379v1 5576 7666 GGXHOI 431 - 5576 7666 0 3 370,558,1132, 0,385,958, -,-,-, 698509 Satellite W-chromosome 585 chrUn_NT_471383v1 5218 5837 CR1-H 684 - 5218 5837 0 2 138,469, 0,150, -,-, 698528 LINE CR1 585 chrUn_NT_471384v1 368 1219 GGXHOI 354 + 368 1219 0 2 483,309, 0,542, +,+, 698531 Satellite W-chromosome 585 chrUn_NT_471384v1 4648 6754 GGXHOI 413 - 4648 6754 0 2 1002,1089, 0,1017, -,-, 698537 Satellite W-chromosome 585 chrUn_NT_471385v1 685 1971 GGXHOI 357 - 685 1971 0 2 751,472, 0,814, -,-, 698540 Satellite W-chromosome 585 chrUn_NT_471385v1 2070 3453 GGXHOI 375 - 2070 3453 0 3 516,474,268, 0,579,1115, -,-,-, 698541 Satellite W-chromosome 585 chrUn_NT_471385v1 6493 7147 (CCTTG)n 518 + 6493 7147 0 2 251,379, 0,275, +,+, 698548 Simple_repeat Simple_repeat 585 chrUn_NT_471386v1 6314 7399 GGXHOI 404 - 6314 7399 0 2 671,354, 0,731, -,-, 698556 Satellite W-chromosome 585 chrUn_NT_471391v1 271 909 (CGAGG)n 535 + 271 909 0 2 431,176, 0,462, +,+, 698571 Simple_repeat Simple_repeat 585 chrUn_NT_471391v1 2870 5016 (CGAGG)n 562 + 2870 5016 0 5 259,235,200,946,438, 0,272,507,718,1708, +,+,+,+,+, 698580 Simple_repeat Simple_repeat 585 chrUn_NT_471391v1 6095 6755 (CGAGG)n 548 + 6095 6755 0 2 343,134, 0,526, +,+, 698585 Simple_repeat Simple_repeat 585 chrUn_NT_471391v1 6664 7070 (CAAGG)n 480 + 6664 7070 0 2 122,23, 0,383, +,+, 698587 Simple_repeat Simple_repeat 585 chrUn_NT_471392v1 1943 2947 (GCCCCACAGCT)n 640 + 1943 2947 0 4 111,169,156,277, 0,240,538,727, +,+,+,+, 698593 Satellite Satellite 585 chrUn_NT_471392v1 4103 5193 (ACCCCATAGGG)n 573 - 4103 5193 0 6 154,150,150,189,231,38, 0,173,342,492,681,1052, -,-,-,-,-,-, 698602 Satellite Satellite 585 chrUn_NT_471392v1 6842 7093 (CTCTATGGGG)n 254 + 6842 7093 0 2 118,113, 0,138, +,+, 698606 Satellite Satellite 585 chrUn_NT_471392v1 7158 7649 (CTCTATGGGG)n 296 + 7158 7649 0 2 370,101, 0,390, +,+, 698607 Satellite Satellite 585 chrUn_NT_471393v1 2477 3592 CR1-B2 703 - 2477 3592 0 2 888,224, 0,891, -,-, 698612 LINE CR1 585 chrUn_NT_471394v1 2210 2342 GA-rich 344 + 2210 2342 0 2 42,33, 0,99, +,+, 698620 Low_complexity Low_complexity 585 chrUn_NT_471396v1 4618 4710 A-rich 400 + 4618 4710 0 2 22,11, 0,81, +,+, 698650 Low_complexity Low_complexity 585 chrUn_NT_471397v1 6314 7423 CR1-B2 695 + 6314 7423 0 2 225,881, 0,228, +,+, 698665 LINE CR1 585 chrUn_NT_471400v1 4789 5831 GGXHOI 320 + 4789 5831 0 2 234,765, 0,277, +,+, 698675 Satellite W-chromosome 585 chrUn_NT_471400v1 5904 7655 GGXHOI 391 + 5904 7655 0 2 927,803, 0,948, +,+, 698676 Satellite W-chromosome 585 chrUn_NT_471402v1 2546 3005 (GCCCCACAGCT)n 446 + 2546 3005 0 3 127,139,127, 0,149,332, +,+,+, 698680 Satellite Satellite 585 chrUn_NT_471404v1 274 455 (ACCCATAGGG)n 592 - 274 455 0 2 65,69, 0,112, -,-, 698691 Satellite Satellite 585 chrUn_NT_471404v1 602 1574 (ACCCCATAGGG)n 555 - 602 1574 0 7 138,138,41,64,73,41,138, 0,198,394,493,611,733,834, -,-,-,-,-,-,-, 698692 Satellite Satellite 585 chrUn_NT_471404v1 1639 2767 (ACCCCATAGGG)n 480 - 1639 2767 0 7 73,73,178,73,137,138,138, 0,120,245,470,595,792,990, -,-,-,-,-,-,-, 698693 Satellite Satellite 585 chrUn_NT_471404v1 6138 6391 (ATGGCCCTAC)n 791 + 6138 6391 0 3 57,58,50, 0,101,203, +,+,+, 698696 Simple_repeat Simple_repeat 585 chrUn_NT_471405v1 3130 3478 (CTCTATGGGG)n 318 - 3130 3478 0 2 174,153, 0,195, -,-, 698700 Satellite Satellite 585 chrUn_NT_471405v1 4003 4258 (CTCTATGGGG)n 267 + 4003 4258 0 2 110,119, 0,136, +,+, 698704 Satellite Satellite 585 chrUn_NT_471405v1 4911 5193 (CTCTATGGGG)n 240 + 4911 5193 0 2 125,119, 0,163, +,+, 698709 Satellite Satellite 585 chrUn_NT_471405v1 5419 5721 (GCCCCACAGCT)n 180 - 5419 5721 0 2 116,81, 0,221, -,-, 698711 Satellite Satellite 585 chrUn_NT_471405v1 5965 6658 (CTCTATGGGG)n 249 + 5965 6658 0 4 126,110,113,242, 0,152,307,451, +,+,+,+, 698714 Satellite Satellite 585 chrUn_NT_471405v1 6808 7274 (GCCCCACAGCT)n 165 - 6808 7274 0 3 252,20,61, 0,280,405, -,-,-, 698717 Satellite Satellite 585 chrUn_NT_471406v1 3076 3646 GGERVK10-int 369 - 3076 3646 0 3 71,125,64, 0,222,506, -,-,-, 698724 LTR ERVK 585 chrUn_NT_471407v1 1998 6681 GGXHOI 424 + 1998 6681 0 7 163,437,989,1519,521,521,436, 0,183,633,1637,3171,3705,4247, +,+,+,+,+,+,+, 698731 Satellite W-chromosome 585 chrUn_NT_471408v1 3250 7644 GGXHOI 442 - 3250 7644 0 6 407,1160,142,262,1294,1048, 0,424,1597,1756,2036,3346, -,-,-,-,-,-, 698735 Satellite W-chromosome 585 chrUn_NT_471410v1 738 1768 (CGAGG)n 533 + 738 1768 0 2 183,799, 0,231, +,+, 698740 Simple_repeat Simple_repeat 585 chrUn_NT_471410v1 2335 4038 (CGAGG)n 502 + 2335 4038 0 2 363,1329, 0,374, +,+, 698743 Simple_repeat Simple_repeat 585 chrUn_NT_471410v1 4687 5039 (CGAGG)n 452 + 4687 5039 0 2 128,40, 0,312, +,+, 698745 Simple_repeat Simple_repeat 585 chrUn_NT_471410v1 5358 6787 (CGAGG)n 447 + 5358 6787 0 3 537,358,486, 0,565,943, +,+,+, 698748 Simple_repeat Simple_repeat 585 chrUn_NT_471413v1 551 6180 GGXHOI 531 + 551 6180 0 10 715,400,354,372,194,305,217,372,195,142, 0,1039,1473,2020,2708,3212,3898,4411,5103,5487, +,+,+,+,+,+,+,+,+,+, 698774 Satellite W-chromosome 585 chrUn_NT_471413v1 6264 7051 GGXHOI 521 + 6264 7051 0 3 385,161,218, 0,397,569, +,+,+, 698783 Satellite W-chromosome 585 chrUn_NT_471413v1 7205 7633 GGXHOI 658 + 7205 7633 0 2 43,14, 0,414, +,+, 698784 Satellite W-chromosome 585 chrUn_NT_471414v1 3865 7640 GGXHOI 596 - 3865 7640 0 4 406,573,458,554, 0,962,2206,3221, -,-,-,-, 698790 Satellite W-chromosome 585 chrUn_NT_471415v1 1513 2481 GGXHOI 383 - 1513 2481 0 2 322,592, 0,376, -,-, 698795 Satellite W-chromosome 585 chrUn_NT_471415v1 2618 5025 GGXHOI 410 - 2618 5025 0 2 950,1438, 0,969, -,-, 698796 Satellite W-chromosome 585 chrUn_NT_471415v1 5236 7587 GGXHOI 385 - 5236 7587 0 4 434,138,1285,393, 0,462,636,1958, -,-,-,-, 698797 Satellite W-chromosome 585 chrUn_NT_471417v1 6259 7638 CR1-F 848 + 6259 7638 0 2 1011,364, 0,1015, +,+, 698806 LINE CR1 585 chrUn_NT_471418v1 4827 5446 CR1-H 641 - 4827 5446 0 2 137,472, 0,147, -,-, 698811 LINE CR1 585 chrUn_NT_471419v1 2198 3165 GGXHOI 311 - 2198 3165 0 2 279,667, 0,300, -,-, 698817 Satellite W-chromosome 585 chrUn_NT_471420v1 1430 2282 GGXHOI 408 - 1430 2282 0 2 356,480, 0,372, -,-, 698828 Satellite W-chromosome 585 chrUn_NT_471420v1 3628 4531 GGXHOI 348 - 3628 4531 0 2 142,708, 0,195, -,-, 698831 Satellite W-chromosome 585 chrUn_NT_471420v1 4711 7248 GGXHOI 400 - 4711 7248 0 2 646,1854, 0,683, -,-, 698832 Satellite W-chromosome 585 chrUn_NT_471421v1 1673 2292 CR1-H 670 - 1673 2292 0 2 139,474, 0,145, -,-, 698835 LINE CR1 585 chrUn_NT_471421v1 4474 4926 CR1-H 652 - 4474 4926 0 2 158,294, 0,158, -,-, 698839 LINE CR1 585 chrUn_NT_471425v1 2743 3142 GGLTR7B 266 - 2743 3142 0 2 293,104, 0,295, -,-, 698853 LTR ERV1 585 chrUn_NT_471425v1 3530 3771 (CTCTATGGGG)n 406 + 3530 3771 0 2 96,17, 0,224, +,+, 698854 Satellite Satellite 585 chrUn_NT_471425v1 3854 6390 GGERVL-B-int 717 - 3854 6390 0 3 1876,268,310, 0,1958,2226, -,-,-, 698856 LTR ERVL 585 chrUn_NT_471425v1 6662 7326 (CCTCG)n 524 + 6662 7326 0 2 385,254, 0,410, +,+, 698858 Simple_repeat Simple_repeat 585 chrUn_NT_471426v1 4669 7008 GGXHOI 410 - 4669 7008 0 8 406,128,212,531,315,162,256,131, 0,447,595,853,1397,1727,1937,2208, -,-,-,-,-,-,-,-, 698863 Satellite W-chromosome 585 chrUn_NT_471428v1 1341 1435 (C)n 745 + 1341 1435 0 2 27,33, 0,61, +,+, 698875 Simple_repeat Simple_repeat 585 chrUn_NT_471429v1 1631 2791 GGLTR7-int 312 - 1631 2791 0 2 223,163, 0,997, -,-, 698882 LTR ERV1 585 chrUn_NT_471429v1 3669 6634 GGERVL-B-int 714 - 3669 6634 0 3 2227,51,312, 0,2228,2653, -,-,-, 698886 LTR ERVL 585 chrUn_NT_471433v1 611 2114 GGXHOI 383 + 611 2114 0 4 179,305,492,428, 0,224,544,1075, +,+,+,+, 698923 Satellite W-chromosome 585 chrUn_NT_471433v1 2193 3652 GGXHOI 410 + 2193 3652 0 4 208,136,777,244, 0,222,377,1215, +,+,+,+, 698924 Satellite W-chromosome 585 chrUn_NT_471433v1 4669 5988 GGXHOI 338 + 4669 5988 0 6 131,123,134,147,480,175, 0,150,287,463,649,1144, +,+,+,+,+,+, 698927 Satellite W-chromosome 585 chrUn_NT_471433v1 6121 7628 GGXHOI 354 + 6121 7628 0 2 649,807, 0,700, +,+, 698928 Satellite W-chromosome 585 chrUn_NT_471434v1 3873 7602 GGXHOI 354 - 3873 7602 0 2 1651,2061, 0,1668, -,-, 698931 Satellite W-chromosome 585 chrUn_NT_471437v1 1172 3765 GGXHOI 374 - 1172 3765 0 2 1553,1016, 0,1577, -,-, 698968 Satellite W-chromosome 585 chrUn_NT_471437v1 3975 7341 GGXHOI 369 - 3975 7341 0 4 1139,1119,320,714, 0,1157,2297,2652, -,-,-,-, 698969 Satellite W-chromosome 585 chrUn_NT_471438v1 2788 3930 GGXHOI 420 - 2788 3930 0 4 293,142,516,143, 0,309,462,999, -,-,-,-, 698974 Satellite W-chromosome 585 chrUn_NT_471438v1 4025 4834 GGXHOI 377 - 4025 4834 0 2 343,448, 0,361, -,-, 698975 Satellite W-chromosome 585 chrUn_NT_471438v1 4901 7032 GGXHOI 359 - 4901 7032 0 3 778,501,752, 0,819,1379, -,-,-, 698976 Satellite W-chromosome 585 chrUn_NT_471440v1 4195 5206 CR1-B2 688 - 4195 5206 0 2 784,224, 0,787, -,-, 698988 LINE CR1 585 chrUn_NT_471441v1 1235 2735 GGXHOI 405 - 1235 2735 0 3 398,142,934, 0,411,566, -,-,-, 698992 Satellite W-chromosome 585 chrUn_NT_471441v1 6803 7252 GGXHOI 379 - 6803 7252 0 2 145,287, 0,162, -,-, 699000 Satellite W-chromosome 585 chrUn_NT_471444v1 635 1803 GGXHOI 437 - 635 1803 0 3 140,354,647, 0,156,521, -,-,-, 699030 Satellite W-chromosome 585 chrUn_NT_471444v1 1999 7592 GGXHOI 429 - 1999 7592 0 14 595,193,427,349,437,148,580,525,561,676,182,186,271,146, 0,607,812,1254,1621,2076,2283,2875,3411,3989,4721,4918,5154,5447, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 699031 Satellite W-chromosome 585 chrUn_NT_471445v1 3946 5019 GGXHOI 387 - 3946 5019 0 3 145,407,452, 0,161,621, -,-,-, 699038 Satellite W-chromosome 585 chrUn_NT_471445v1 5846 7606 GGXHOI 377 - 5846 7606 0 2 388,1353, 0,407, -,-, 699040 Satellite W-chromosome 585 chrUn_NT_471446v1 6780 7596 GGXHOI 416 - 6780 7596 0 2 484,294, 0,522, -,-, 699042 Satellite W-chromosome 585 chrUn_NT_471453v1 4663 7594 GGXHOI 395 - 4663 7594 0 3 630,453,1804, 0,653,1127, -,-,-, 699110 Satellite W-chromosome 585 chrUn_NT_471455v1 2179 2313 G-rich 550 + 2179 2313 0 2 39,38, 0,96, +,+, 699112 Low_complexity Low_complexity 585 chrUn_NT_471456v1 3766 4188 GGXHOI 360 - 3766 4188 0 2 110,300, 0,122, -,-, 699118 Satellite W-chromosome 585 chrUn_NT_471456v1 6332 7583 GGXHOI 377 - 6332 7583 0 2 715,479, 0,772, -,-, 699122 Satellite W-chromosome 585 chrUn_NT_471457v1 2317 4799 GGXHOI 373 + 2317 4799 0 2 1082,1337, 0,1145, +,+, 699125 Satellite W-chromosome 585 chrUn_NT_471458v1 457 3890 (CCCTAA)n 589 + 457 3890 0 10 423,192,205,758,394,178,206,174,363,150, 0,460,665,882,1693,2108,2286,2523,2709,3283, +,+,+,+,+,+,+,+,+,+, 699133 Simple_repeat Simple_repeat 585 chrUn_NT_471458v1 3948 5194 (CCCTAA)n 511 + 3948 5194 0 4 694,224,178,49, 0,722,957,1197, +,+,+,+, 699136 Simple_repeat Simple_repeat 585 chrUn_NT_471458v1 5345 5698 (CCCTAA)n 506 + 5345 5698 0 2 183,153, 0,200, +,+, 699137 Simple_repeat Simple_repeat 585 chrUn_NT_471458v1 5710 6520 (CCCTAA)n 641 + 5710 6520 0 3 189,209,389, 0,189,421, +,+,+, 699139 Simple_repeat Simple_repeat 585 chrUn_NT_471458v1 6854 7508 (CCCTAA)n 622 + 6854 7508 0 3 180,185,241, 0,191,413, +,+,+, 699143 Simple_repeat Simple_repeat 585 chrUn_NT_471460v1 5693 6301 GGXHOI 319 - 5693 6301 0 2 129,468, 0,140, -,-, 699149 Satellite W-chromosome 585 chrUn_NT_471462v1 1594 2120 (CGAGG)n 499 + 1594 2120 0 2 334,178, 0,348, +,+, 699162 Simple_repeat Simple_repeat 585 chrUn_NT_471462v1 3716 4257 (CGAGG)n 540 + 3716 4257 0 2 178,345, 0,196, +,+, 699168 Simple_repeat Simple_repeat 585 chrUn_NT_471462v1 4567 5220 (CGAGG)n 527 + 4567 5220 0 2 315,284, 0,369, +,+, 699172 Simple_repeat Simple_repeat 585 chrUn_NT_471462v1 5418 6550 (CGAGG)n 511 + 5418 6550 0 4 249,83,348,177, 0,433,565,955, +,+,+,+, 699173 Simple_repeat Simple_repeat 585 chrUn_NT_471462v1 6619 7111 (CGAGG)n 546 + 6619 7111 0 2 293,184, 0,308, +,+, 699175 Simple_repeat Simple_repeat 585 chrUn_NT_471464v1 301 2869 GGXHOI 441 - 301 2869 0 3 1426,64,1043, 0,1446,1525, -,-,-, 699183 Satellite W-chromosome 585 chrUn_NT_471464v1 2964 6462 GGXHOI 410 - 2964 6462 0 3 877,1039,1511, 0,933,1987, -,-,-, 699184 Satellite W-chromosome 585 chrUn_NT_471465v1 1188 1999 GGXHOI 514 + 1188 1999 0 2 246,249, 0,562, +,+, 699188 Satellite W-chromosome 585 chrUn_NT_471465v1 2069 5510 GGXHOI 531 + 2069 5510 0 8 163,245,222,245,194,246,191,16, 0,205,466,1009,1701,2218,2911,3425, +,+,+,+,+,+,+,+, 699190 Satellite W-chromosome 585 chrUn_NT_471465v1 5580 6696 GGXHOI 548 + 5580 6696 0 3 159,37,136, 0,603,980, +,+,+, 699196 Satellite W-chromosome 585 chrUn_NT_471466v1 4105 4727 CR1-H 671 + 4105 4727 0 2 477,139, 0,483, +,+, 699203 LINE CR1 585 chrUn_NT_471468v1 689 859 (CCCCATTGGG)n 334 - 689 859 0 2 35,38, 0,132, -,-, 699213 Satellite Satellite 585 chrUn_NT_471468v1 1875 2732 (ACCCATTGGG)n 431 - 1875 2732 0 3 35,45,23, 0,702,834, -,-,-, 699219 Satellite Satellite 585 chrUn_NT_471468v1 2343 2500 (CCCCATTGGG)n 448 - 2343 2500 0 2 62,49, 0,108, -,-, 699223 Satellite Satellite 585 chrUn_NT_471468v1 2819 4262 (CCCCATTGGG)n 458 - 2819 4262 0 2 42,257, 0,1186, -,-, 699226 Satellite Satellite 585 chrUn_NT_471468v1 4794 4986 (ACCCATTGGG)n 418 - 4794 4986 0 2 71,74, 0,118, -,-, 699235 Satellite Satellite 585 chrUn_NT_471468v1 5540 5745 (ACCCATTGGG)n 398 - 5540 5745 0 2 35,62, 0,143, -,-, 699239 Satellite Satellite 585 chrUn_NT_471469v1 5735 6311 A-rich 565 + 5735 6311 0 2 483,54, 0,522, +,+, 699259 Low_complexity Low_complexity 585 chrUn_NT_471470v1 1411 5971 GGXHOI 432 - 1411 5971 0 9 404,388,95,725,157,267,1670,140,450, 0,450,849,978,1764,1937,2259,3944,4110, -,-,-,-,-,-,-,-,-, 699264 Satellite W-chromosome 585 chrUn_NT_471470v1 6255 7264 GGXHOI 430 - 6255 7264 0 4 135,229,137,453, 0,152,397,556, -,-,-,-, 699266 Satellite W-chromosome 585 chrUn_NT_471471v1 1963 3979 CR1-H 747 - 1963 3979 0 2 1720,296, 0,1720, -,-, 699270 LINE CR1 585 chrUn_NT_471473v1 1312 1958 (CAAGG)n 496 + 1312 1958 0 3 229,135,156, 0,336,490, +,+,+, 699279 Simple_repeat Simple_repeat 585 chrUn_NT_471473v1 2011 2242 (CAAGG)n 464 + 2011 2242 0 2 24,183, 0,48, +,+, 699282 Simple_repeat Simple_repeat 585 chrUn_NT_471473v1 2359 2988 (CCTTG)n 550 + 2359 2988 0 2 259,353, 0,276, +,+, 699284 Simple_repeat Simple_repeat 585 chrUn_NT_471473v1 3813 4920 (CAAGG)n 487 + 3813 4920 0 4 372,214,281,25, 0,372,617,1082, +,+,+,+, 699290 Simple_repeat Simple_repeat 585 chrUn_NT_471475v1 1517 2664 (CCTTG)n 640 + 1517 2664 0 4 403,95,36,178, 0,425,919,969, +,+,+,+, 699316 Simple_repeat Simple_repeat 585 chrUn_NT_471475v1 2605 3040 (GCCTG)n 484 + 2605 3040 0 2 117,42, 0,393, +,+, 699320 Simple_repeat Simple_repeat 585 chrUn_NT_471475v1 3141 3536 (CCTTG)n 637 + 3141 3536 0 2 180,215, 0,180, +,+, 699324 Simple_repeat Simple_repeat 585 chrUn_NT_471475v1 4284 5045 (CCTTG)n 592 + 4284 5045 0 3 363,21,25, 0,539,736, +,+,+, 699327 Simple_repeat Simple_repeat 585 chrUn_NT_471475v1 5159 6191 (CCTTG)n 568 + 5159 6191 0 3 558,230,38, 0,585,994, +,+,+, 699331 Simple_repeat Simple_repeat 585 chrUn_NT_471475v1 6261 7198 (CCTTG)n 635 + 6261 7198 0 4 150,32,260,83, 0,336,404,854, +,+,+,+, 699333 Simple_repeat Simple_repeat 585 chrUn_NT_471477v1 1522 2053 Sat-CR1_GG 174 - 1522 2053 0 2 106,164, 0,367, -,-, 699343 Satellite Satellite 585 chrUn_NT_471477v1 2688 3219 Sat-CR1_GG 172 + 2688 3219 0 2 164,124, 0,407, +,+, 699348 Satellite Satellite 585 chrUn_NT_471477v1 4021 4922 Sat-CR1_GG 210 - 4021 4922 0 2 476,164, 0,737, -,-, 699352 Satellite Satellite 585 chrUn_NT_471477v1 5558 6087 Sat-CR1_GG 172 + 5558 6087 0 2 162,124, 0,405, +,+, 699357 Satellite Satellite 585 chrUn_NT_471478v1 3110 3448 GGXHOI 488 - 3110 3448 0 2 276,50, 0,288, -,-, 699363 Satellite W-chromosome 585 chrUn_NT_471478v1 4229 4702 GGXHOI 384 - 4229 4702 0 2 324,133, 0,340, -,-, 699365 Satellite W-chromosome 585 chrUn_NT_471478v1 5087 7530 GGXHOI 369 - 5087 7530 0 3 1057,245,1092, 0,1075,1351, -,-,-, 699367 Satellite W-chromosome 585 chrUn_NT_471479v1 6878 7580 (GGTTG)n 707 + 6878 7580 0 2 165,508, 0,194, +,+, 699385 Simple_repeat Simple_repeat 585 chrUn_NT_471480v1 3087 4508 GGLTR7-int 304 - 3087 4508 0 3 293,233,102, 0,1060,1319, -,-,-, 699388 LTR ERV1 585 chrUn_NT_471482v1 4987 7060 GGXHOI 339 - 4987 7060 0 3 833,456,742, 0,863,1331, -,-,-, 699401 Satellite W-chromosome 585 chrUn_NT_471487v1 734 3267 GGXHOI 350 - 734 3267 0 5 546,403,359,546,564, 0,590,1005,1382,1969, -,-,-,-,-, 699447 Satellite W-chromosome 585 chrUn_NT_471487v1 4710 5494 GGXHOI 291 - 4710 5494 0 2 228,537, 0,247, -,-, 699449 Satellite W-chromosome 585 chrUn_NT_471487v1 5810 7537 GGXHOI 327 - 5810 7537 0 3 830,404,415, 0,853,1312, -,-,-, 699451 Satellite W-chromosome 585 chrUn_NT_471488v1 389 747 (CAGGC)n 502 + 389 747 0 2 138,29, 0,329, +,+, 699453 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 527 957 (CAAGG)n 591 + 527 957 0 2 191,239, 0,191, +,+, 699454 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 1233 2360 (CAAGG)n 582 + 1233 2360 0 2 695,432, 0,695, +,+, 699457 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 2378 3358 (CAAGG)n 591 + 2378 3358 0 4 358,146,21,74, 0,381,708,906, +,+,+,+, 699459 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 3595 3946 (CAGGC)n 482 + 3595 3946 0 2 116,54, 0,297, +,+, 699464 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 3912 5205 (CAAGG)n 562 + 3912 5205 0 4 247,177,178,644, 0,262,454,649, +,+,+,+, 699466 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 5227 5757 (CAAGG)n 602 + 5227 5757 0 2 314,45, 0,485, +,+, 699468 Simple_repeat Simple_repeat 585 chrUn_NT_471488v1 6916 7246 GGXHOI 362 + 6916 7246 0 2 142,159, 0,171, +,+, 699471 Satellite W-chromosome 585 chrUn_NT_471491v1 2741 3431 CR1-H 660 + 2741 3431 0 2 488,158, 0,532, +,+, 699482 LINE CR1 585 chrUn_NT_471493v1 559 2184 GGXHOI 390 + 559 2184 0 2 1046,516, 0,1109, +,+, 699512 Satellite W-chromosome 585 chrUn_NT_471493v1 2283 3334 GGXHOI 392 + 2283 3334 0 2 472,516, 0,535, +,+, 699513 Satellite W-chromosome 585 chrUn_NT_471494v1 2097 5250 GGXHOI 346 - 2097 5250 0 10 131,267,162,167,892,295,119,122,291,398, 0,187,466,644,860,1776,2130,2273,2436,2755, -,-,-,-,-,-,-,-,-,-, 699521 Satellite W-chromosome 585 chrUn_NT_471494v1 5321 6277 GGXHOI 358 - 5321 6277 0 4 181,214,220,230, 0,217,443,726, -,-,-,-, 699522 Satellite W-chromosome 585 chrUn_NT_471494v1 6772 7229 GGXHOI 409 - 6772 7229 0 2 317,100, 0,357, -,-, 699524 Satellite W-chromosome 585 chrUn_NT_471495v1 1939 3124 GGXHOI 381 - 1939 3124 0 3 377,292,437, 0,420,748, -,-,-, 699530 Satellite W-chromosome 585 chrUn_NT_471495v1 5042 7557 GGXHOI 393 - 5042 7557 0 2 1874,579, 0,1936, -,-, 699532 Satellite W-chromosome 585 chrUn_NT_471497v1 1089 2483 GGXHOI 409 + 1089 2483 0 2 252,1124, 0,270, +,+, 699553 Satellite W-chromosome 585 chrUn_NT_471497v1 2779 4600 GGXHOI 449 + 2779 4600 0 3 1088,394,301, 0,1110,1520, +,+,+, 699554 Satellite W-chromosome 585 chrUn_NT_471497v1 4865 6042 GGXHOI 427 + 4865 6042 0 3 184,489,436, 0,212,741, +,+,+, 699555 Satellite W-chromosome 585 chrUn_NT_471497v1 6572 7126 GGXHOI 371 + 6572 7126 0 2 360,171, 0,383, +,+, 699557 Satellite W-chromosome 585 chrUn_NT_471497v1 7204 7489 GGXHOI 423 + 7204 7489 0 2 145,125, 0,160, +,+, 699558 Satellite W-chromosome 585 chrUn_NT_471500v1 1156 7531 GGXHOI 397 + 1156 7531 0 2 5000,1359, 0,5016, +,+, 699571 Satellite W-chromosome 585 chrUn_NT_471501v1 735 1786 GGXHOI 392 + 735 1786 0 2 472,516, 0,535, +,+, 699573 Satellite W-chromosome 585 chrUn_NT_471501v1 1885 2936 GGXHOI 392 + 1885 2936 0 2 472,516, 0,535, +,+, 699574 Satellite W-chromosome 585 chrUn_NT_471501v1 3035 4086 GGXHOI 392 + 3035 4086 0 2 472,516, 0,535, +,+, 699575 Satellite W-chromosome 585 chrUn_NT_471501v1 4185 5236 GGXHOI 392 + 4185 5236 0 2 472,516, 0,535, +,+, 699576 Satellite W-chromosome 585 chrUn_NT_471501v1 5335 6386 GGXHOI 392 + 5335 6386 0 2 472,516, 0,535, +,+, 699577 Satellite W-chromosome 585 chrUn_NT_471501v1 6485 7532 GGXHOI 389 + 6485 7532 0 2 472,512, 0,535, +,+, 699578 Satellite W-chromosome 585 chrUn_NT_471503v1 6509 7290 (CTCTATGGGG)n 709 + 6509 7290 0 4 120,91,130,257, 0,171,382,524, +,+,+,+, 699596 Satellite Satellite 585 chrUn_NT_471504v1 944 1469 (CTCTATGGGG)n 529 - 944 1469 0 3 96,14,272, 0,218,253, -,-,-, 699604 Satellite Satellite 585 chrUn_NT_471504v1 2150 2386 (CTCTATGGGG)n 513 - 2150 2386 0 2 123,102, 0,134, -,-, 699610 Satellite Satellite 585 chrUn_NT_471504v1 2812 3219 (CTCTATGGGG)n 582 + 2812 3219 0 2 127,114, 0,293, +,+, 699615 Satellite Satellite 585 chrUn_NT_471504v1 4025 4892 (CTCTATGGGG)n 596 - 4025 4892 0 5 133,172,60,118,147, 0,145,442,563,720, -,-,-,-,-, 699622 Satellite Satellite 585 chrUn_NT_471504v1 5378 5644 (CTCTATGGGG)n 497 - 5378 5644 0 2 130,111, 0,155, -,-, 699627 Satellite Satellite 585 chrUn_NT_471504v1 6318 6771 (CTCTATGGGG)n 604 - 6318 6771 0 2 63,255, 0,198, -,-, 699630 Satellite Satellite 585 chrUn_NT_471505v1 5409 7227 GGXHOI 319 + 5409 7227 0 3 501,1114,165, 0,525,1653, +,+,+, 699640 Satellite W-chromosome 585 chrUn_NT_471506v1 2899 3835 GGXHOI 441 - 2899 3835 0 2 163,726, 0,210, -,-, 699645 Satellite W-chromosome 585 chrUn_NT_471506v1 3867 4336 GGXHOI 381 - 3867 4336 0 2 308,136, 0,333, -,-, 699647 Satellite W-chromosome 585 chrUn_NT_471506v1 4417 5963 GGXHOI 357 - 4417 5963 0 3 268,617,589, 0,293,957, -,-,-, 699648 Satellite W-chromosome 585 chrUn_NT_471507v1 283 1754 (CGAGG)n 485 + 283 1754 0 3 186,517,717, 0,206,754, +,+,+, 699654 Simple_repeat Simple_repeat 585 chrUn_NT_471507v1 1839 2217 (CGAGG)n 591 + 1839 2217 0 2 178,175, 0,203, +,+, 699656 Simple_repeat Simple_repeat 585 chrUn_NT_471507v1 3265 3497 (CGAGG)n 615 + 3265 3497 0 2 40,179, 0,53, +,+, 699659 Simple_repeat Simple_repeat 585 chrUn_NT_471507v1 4349 5162 (CGAGG)n 486 + 4349 5162 0 3 181,411,208, 0,194,605, +,+,+, 699665 Simple_repeat Simple_repeat 585 chrUn_NT_471507v1 5955 6934 (CGAGG)n 485 + 5955 6934 0 3 361,263,145, 0,397,834, +,+,+, 699668 Simple_repeat Simple_repeat 585 chrUn_NT_471508v1 849 1315 (CAGGC)n 526 + 849 1315 0 2 184,282, 0,184, +,+, 699677 Simple_repeat Simple_repeat 585 chrUn_NT_471508v1 1656 2914 (CAAGG)n 603 + 1656 2914 0 3 409,232,392, 0,444,866, +,+,+, 699680 Simple_repeat Simple_repeat 585 chrUn_NT_471508v1 4014 7510 GGXHOI 429 - 4014 7510 0 4 353,908,1301,850, 0,382,1313,2646, -,-,-,-, 699686 Satellite W-chromosome 585 chrUn_NT_471509v1 1390 3779 GGXHOI 382 + 1390 3779 0 7 292,318,324,517,101,142,519, 0,312,652,993,1545,1684,1870, +,+,+,+,+,+,+, 699688 Satellite W-chromosome 585 chrUn_NT_471509v1 4260 7464 GGXHOI 420 + 4260 7464 0 2 1044,2110, 0,1094, +,+, 699689 Satellite W-chromosome 585 chrUn_NT_471510v1 1975 2072 (C)n 811 + 1975 2072 0 2 36,17, 0,80, +,+, 699696 Simple_repeat Simple_repeat 585 chrUn_NT_471510v1 4769 6111 CR1-B2 693 + 4769 6111 0 4 55,55,44,60, 0,957,1012,1282, +,+,+,+, 699701 LINE CR1 585 chrUn_NT_471510v1 4861 5077 CR1-C4 649 + 4861 5077 0 2 49,54, 0,162, +,+, 699702 LINE CR1 585 chrUn_NT_471510v1 5867 6015 CR1-C4 604 + 5867 6015 0 3 52,52,44, 0,52,104, +,+,+, 699706 LINE CR1 585 chrUn_NT_471511v1 1547 2405 (CGAGG)n 492 + 1547 2405 0 4 213,51,177,190, 0,394,461,668, +,+,+,+, 699714 Simple_repeat Simple_repeat 585 chrUn_NT_471511v1 2494 3448 (CGAGG)n 530 + 2494 3448 0 3 379,177,323, 0,439,631, +,+,+, 699717 Simple_repeat Simple_repeat 585 chrUn_NT_471511v1 3505 5455 (CGAGG)n 511 + 3505 5455 0 4 771,175,372,582, 0,785,980,1368, +,+,+,+, 699719 Simple_repeat Simple_repeat 585 chrUn_NT_471511v1 5527 6041 (CGAGG)n 536 + 5527 6041 0 2 182,321, 0,193, +,+, 699720 Simple_repeat Simple_repeat 585 chrUn_NT_471511v1 6122 7031 (CGAGG)n 525 + 6122 7031 0 3 299,348,185, 0,356,724, +,+,+, 699721 Simple_repeat Simple_repeat 585 chrUn_NT_471511v1 7410 7538 (GGCGA)n 262 + 7410 7538 0 2 36,55, 0,73, +,+, 699723 Simple_repeat Simple_repeat 585 chrUn_NT_471513v1 4080 5475 GGXHOI 393 - 4080 5475 0 3 357,525,439, 0,411,956, -,-,-, 699739 Satellite W-chromosome 585 chrUn_NT_471513v1 5574 6438 GGXHOI 408 - 5574 6438 0 2 456,361, 0,503, -,-, 699740 Satellite W-chromosome 585 chrUn_NT_471514v1 107 564 (ACCCATAGGG)n 836 - 107 564 0 2 227,111, 0,346, -,-, 699744 Satellite Satellite 585 chrUn_NT_471514v1 704 1323 (ACCCATAGGG)n 752 - 704 1323 0 2 180,200, 0,419, -,-, 699747 Satellite Satellite 585 chrUn_NT_471514v1 1612 2512 (ACCCATAGGG)n 784 - 1612 2512 0 5 111,31,176,50,20, 0,229,301,710,880, -,-,-,-,-, 699750 Satellite Satellite 585 chrUn_NT_471514v1 3061 3777 (CTCTATGGGG)n 623 + 3061 3777 0 5 127,120,111,131,116, 0,144,281,408,600, +,+,+,+,+, 699758 Satellite Satellite 585 chrUn_NT_471516v1 1157 1546 GGXHOI 385 - 1157 1546 0 2 129,241, 0,148, -,-, 699781 Satellite W-chromosome 585 chrUn_NT_471516v1 1666 3899 GGXHOI 343 - 1666 3899 0 5 315,260,293,542,671, 0,352,657,982,1562, -,-,-,-,-, 699782 Satellite W-chromosome 585 chrUn_NT_471516v1 5145 6383 GGXHOI 343 - 5145 6383 0 5 309,163,222,93,330, 0,321,514,768,908, -,-,-,-,-, 699786 Satellite W-chromosome 585 chrUn_NT_471516v1 6642 7503 GGXHOI 382 - 6642 7503 0 2 136,706, 0,155, -,-, 699787 Satellite W-chromosome 585 chrUn_NT_471519v1 749 856 (TGGAG)n 122 + 749 856 0 2 35,11, 0,96, +,+, 699796 Simple_repeat Simple_repeat 585 chrUn_NT_471521v1 1550 2437 CR1-B2 650 + 1550 2437 0 3 53,60,60, 0,682,827, +,+,+, 699838 LINE CR1 585 chrUn_NT_471521v1 1600 1705 CR1-E 668 + 1600 1705 0 2 54,51, 0,54, +,+, 699839 LINE CR1 585 chrUn_NT_471521v1 1702 1807 CR1-C4 668 + 1702 1807 0 2 54,51, 0,54, +,+, 699840 LINE CR1 585 chrUn_NT_471521v1 1855 2003 CR1-C4 652 + 1855 2003 0 2 48,61, 0,87, +,+, 699842 LINE CR1 585 chrUn_NT_471521v1 2092 2191 CR1-E 712 + 2092 2191 0 2 55,44, 0,55, +,+, 699844 LINE CR1 585 chrUn_NT_471521v1 5116 7169 CR1-Y3 284 - 5116 7169 0 2 37,111, 0,1942, -,-, 699866 LINE CR1 585 chrUn_NT_471521v1 5232 6257 CR1-C2 598 + 5232 6257 0 2 123,47, 0,978, +,+, 699867 LINE CR1 585 chrUn_NT_471521v1 6015 6117 CR1-E 583 + 6015 6117 0 2 53,49, 0,53, +,+, 699869 LINE CR1 585 chrUn_NT_471521v1 6436 6626 CR1-E 569 + 6436 6626 0 2 52,60, 0,130, +,+, 699870 LINE CR1 585 chrUn_NT_471522v1 5776 5946 (GTTGTTTCC)n 961 + 5776 5946 0 2 77,42, 0,128, +,+, 699887 Simple_repeat Simple_repeat 585 chrUn_NT_471523v1 785 2783 GGXHOI 362 - 785 2783 0 2 1849,134, 0,1864, -,-, 699895 Satellite W-chromosome 585 chrUn_NT_471523v1 3079 7218 GGXHOI 426 - 3079 7218 0 5 470,650,635,275,2028, 0,486,1153,1807,2111, -,-,-,-,-, 699897 Satellite W-chromosome 585 chrUn_NT_471527v1 6433 6713 CR1-X2 416 - 6433 6713 0 2 216,62, 0,218, -,-, 699918 LINE CR1 585 chrUn_NT_471528v1 1208 5631 GGXHOI 544 - 1208 5631 0 9 131,186,90,194,299,194,319,194,109, 0,337,1039,1452,1957,2579,3186,3707,4314, -,-,-,-,-,-,-,-,-, 699923 Satellite W-chromosome 585 chrUn_NT_471528v1 5707 6694 GGXHOI 500 - 5707 6694 0 2 19,667, 0,320, -,-, 699932 Satellite W-chromosome 585 chrUn_NT_471530v1 3401 4092 CR1-F 323 - 3401 4092 0 2 558,119, 0,572, -,-, 699939 LINE CR1 585 chrUn_NT_471531v1 3540 3947 (CTCTATGGGG)n 504 + 3540 3947 0 2 248,144, 0,263, +,+, 699947 Satellite Satellite 585 chrUn_NT_471532v1 2170 6221 GGXHOI 360 - 2170 6221 0 5 256,380,1445,1484,387, 0,273,669,2130,3664, -,-,-,-,-, 699950 Satellite W-chromosome 585 chrUn_NT_471533v1 2239 2320 (G)n 953 + 2239 2320 0 2 17,22, 0,59, +,+, 699959 Simple_repeat Simple_repeat 585 chrUn_NT_471534v1 1346 7522 GGXHOI 560 - 1346 7522 0 3 461,330,271, 0,4859,5905, -,-,-, 699968 Satellite W-chromosome 585 chrUn_NT_471535v1 2111 5430 GGXHOI 390 + 2111 5430 0 5 893,634,911,73,689, 0,948,1605,2546,2630, +,+,+,+,+, 699973 Satellite W-chromosome 585 chrUn_NT_471536v1 6167 7519 GGXHOI 392 - 6167 7519 0 5 230,132,125,332,406, 0,277,427,596,946, -,-,-,-,-, 699977 Satellite W-chromosome 585 chrUn_NT_471537v1 4161 7479 GGXHOI 470 + 4161 7479 0 3 558,1158,1559, 0,589,1759, +,+,+, 699983 Satellite W-chromosome 585 chrUn_NT_471538v1 4377 4720 (CATA)n 229 + 4377 4720 0 2 128,202, 0,141, +,+, 699988 Simple_repeat Simple_repeat 585 chrUn_NT_471539v1 3221 5298 GGXHOI 420 + 3221 5298 0 4 338,146,907,647, 0,349,508,1430, +,+,+,+, 699993 Satellite W-chromosome 585 chrUn_NT_471539v1 5383 7511 GGXHOI 406 + 5383 7511 0 4 338,146,907,698, 0,349,508,1430, +,+,+,+, 699994 Satellite W-chromosome 585 chrUn_NT_471540v1 1856 3224 GGXHOI 376 + 1856 3224 0 2 203,1148, 0,220, +,+, 699996 Satellite W-chromosome 585 chrUn_NT_471540v1 3447 4060 GGXHOI 434 + 3447 4060 0 2 423,144, 0,469, +,+, 699997 Satellite W-chromosome 585 chrUn_NT_471540v1 5627 6158 GGXHOI 397 + 5627 6158 0 2 63,443, 0,88, +,+, 700000 Satellite W-chromosome 585 chrUn_NT_471540v1 6250 7032 GGXHOI 339 + 6250 7032 0 2 441,306, 0,476, +,+, 700001 Satellite W-chromosome 585 chrUn_NT_471540v1 7112 7510 GGXHOI 387 + 7112 7510 0 2 96,248, 0,150, +,+, 700002 Satellite W-chromosome 585 chrUn_NT_471543v1 5583 6737 GGXHOI 339 + 5583 6737 0 3 133,275,703, 0,153,451, +,+,+, 700013 Satellite W-chromosome 585 chrUn_NT_471545v1 1512 2414 GGXHOI 498 - 1512 2414 0 2 398,192, 0,710, -,-, 700019 Satellite W-chromosome 585 chrUn_NT_471545v1 4710 5657 GGXHOI 393 - 4710 5657 0 3 415,288,171, 0,475,776, -,-,-, 700025 Satellite W-chromosome 585 chrUn_NT_471545v1 5750 7509 GGXHOI 586 - 5750 7509 0 3 31,134,605, 0,312,1154, -,-,-, 700026 Satellite W-chromosome 585 chrUn_NT_471545v1 6263 6788 GGXHOI 530 - 6263 6788 0 2 20,173, 0,352, -,-, 700028 Satellite W-chromosome 585 chrUn_NT_471546v1 1612 2689 GGXHOI 556 - 1612 2689 0 2 536,205, 0,872, -,-, 700032 Satellite W-chromosome 585 chrUn_NT_471546v1 2786 3717 GGXHOI 536 - 2786 3717 0 2 187,203, 0,728, -,-, 700034 Satellite W-chromosome 585 chrUn_NT_471546v1 5310 6959 GGXHOI 526 - 5310 6959 0 2 1101,207, 0,1442, -,-, 700040 Satellite W-chromosome 585 chrUn_NT_471546v1 7047 7471 GGXHOI 598 - 7047 7471 0 2 162,68, 0,356, -,-, 700042 Satellite W-chromosome 585 chrUn_NT_471548v1 2846 3795 (CTCTATGGGG)n 375 + 2846 3795 0 4 123,490,131,111, 0,134,680,838, +,+,+,+, 700068 Satellite Satellite 585 chrUn_NT_471548v1 4999 5588 (CTCTATGGGG)n 312 + 4999 5588 0 3 163,131,213, 0,212,376, +,+,+, 700073 Satellite Satellite 585 chrUn_NT_471549v1 713 1785 (CGAGG)n 578 + 713 1785 0 2 672,214, 0,858, +,+, 700080 Simple_repeat Simple_repeat 585 chrUn_NT_471549v1 2290 2631 (CAAGG)n 458 + 2290 2631 0 2 104,53, 0,288, +,+, 700084 Simple_repeat Simple_repeat 585 chrUn_NT_471549v1 2881 4137 (CGAGG)n 584 + 2881 4137 0 4 267,135,206,118, 0,448,601,1138, +,+,+,+, 700088 Simple_repeat Simple_repeat 585 chrUn_NT_471549v1 4139 4483 (CAAGG)n 390 + 4139 4483 0 2 125,33, 0,311, +,+, 700092 Simple_repeat Simple_repeat 585 chrUn_NT_471549v1 4506 5906 (CGAGG)n 530 + 4506 5906 0 3 389,278,404, 0,431,996, +,+,+, 700094 Simple_repeat Simple_repeat 585 chrUn_NT_471549v1 6388 7485 (CGAGG)n 575 + 6388 7485 0 4 185,250,180,401, 0,209,490,696, +,+,+,+, 700098 Simple_repeat Simple_repeat 585 chrUn_NT_471550v1 4919 7498 GGXHOI 390 - 4919 7498 0 5 218,783,201,139,1159, 0,232,1039,1263,1420, -,-,-,-,-, 700100 Satellite W-chromosome 585 chrUn_NT_471551v1 4675 5082 GGXHOI 345 + 4675 5082 0 2 243,130, 0,277, +,+, 700102 Satellite W-chromosome 585 chrUn_NT_471551v1 5983 7447 GGXHOI 372 + 5983 7447 0 2 387,1055, 0,409, +,+, 700105 Satellite W-chromosome 585 chrUn_NT_471554v1 1912 2904 CR1-X 344 + 1912 2904 0 2 95,95, 0,897, +,+, 700113 LINE CR1 585 chrUn_NT_471560v1 4017 7492 GGXHOI 576 - 4017 7492 0 5 189,450,334,33,369, 0,860,1984,2865,3106, -,-,-,-,-, 700144 Satellite W-chromosome 585 chrUn_NT_471562v1 789 1272 (ACCCCATAGGG)n 639 + 789 1272 0 3 125,129,121, 0,173,362, +,+,+, 700186 Satellite Satellite 585 chrUn_NT_471562v1 1381 1993 (ACCCCATAGGG)n 589 + 1381 1993 0 2 131,459, 0,153, +,+, 700187 Satellite Satellite 585 chrUn_NT_471562v1 1893 2262 (CTCTATGGGG)n 436 - 1893 2262 0 2 112,122, 0,247, -,-, 700188 Satellite Satellite 585 chrUn_NT_471562v1 2161 2465 (ACCCCATAGGG)n 602 + 2161 2465 0 2 129,150, 0,154, +,+, 700190 Satellite Satellite 585 chrUn_NT_471565v1 787 1135 (TCCTC)n 380 + 787 1135 0 2 25,141, 0,207, +,+, 700219 Simple_repeat Simple_repeat 585 chrUn_NT_471569v1 3830 7145 GGXHOI 366 - 3830 7145 0 2 206,3053, 0,262, -,-, 700272 Satellite W-chromosome 585 chrUn_NT_471570v1 3048 3358 (CTCTATGGGG)n 513 + 3048 3358 0 2 186,113, 0,197, +,+, 700277 Satellite Satellite 585 chrUn_NT_471570v1 4499 5804 (ACCCCATAGGG)n 443 - 4499 5804 0 7 232,74,54,29,93,65,127, 0,435,635,807,853,1068,1178, -,-,-,-,-,-,-, 700283 Satellite Satellite 585 chrUn_NT_471572v1 5906 6048 G-rich 563 + 5906 6048 0 2 38,53, 0,89, +,+, 700293 Low_complexity Low_complexity 585 chrUn_NT_471572v1 6208 7468 CR1-F0 552 + 6208 7468 0 2 607,653, 0,607, +,+, 700294 LINE CR1 585 chrUn_NT_471575v1 1230 3117 GGXHOI 377 + 1230 3117 0 3 1241,132,460, 0,1279,1427, +,+,+, 700300 Satellite W-chromosome 585 chrUn_NT_471575v1 3186 5377 GGXHOI 375 + 3186 5377 0 2 1219,954, 0,1237, +,+, 700301 Satellite W-chromosome 585 chrUn_NT_471575v1 5464 7472 GGXHOI 343 + 5464 7472 0 3 1063,624,289, 0,1080,1719, +,+,+, 700302 Satellite W-chromosome 585 chrUn_NT_471576v1 3229 3737 GGLTR3F2 706 - 3229 3737 0 2 235,231, 0,277, -,-, 700305 LTR ERVL 585 chrUn_NT_471577v1 205 1582 CR1-F 509 + 205 1582 0 4 207,156,205,207, 0,473,920,1170, +,+,+,+, 700311 LINE CR1 585 chrUn_NT_471577v1 1625 3488 CR1-F 505 + 1625 3488 0 6 203,206,204,153,204,208, 0,245,494,965,1410,1655, +,+,+,+,+,+, 700314 LINE CR1 585 chrUn_NT_471577v1 3530 5579 CR1-F 547 + 3530 5579 0 7 205,206,202,180,154,201,179, 0,247,495,739,963,1405,1870, +,+,+,+,+,+,+, 700317 LINE CR1 585 chrUn_NT_471577v1 5623 7474 CR1-F 591 + 5623 7474 0 7 178,191,200,203,204,203,159, 0,223,456,956,1201,1447,1692, +,+,+,+,+,+,+, 700320 LINE CR1 585 chrUn_NT_471580v1 1688 7462 GGXHOI 363 - 1688 7462 0 4 2786,1003,813,1076, 0,2799,3825,4698, -,-,-,-, 700327 Satellite W-chromosome 585 chrUn_NT_471583v1 4613 5240 GGERVK10-int 295 + 4613 5240 0 3 87,140,86, 0,259,541, +,+,+, 700342 LTR ERVK 585 chrUn_NT_471584v1 947 1568 CR1-H 376 - 947 1568 0 2 376,209, 0,412, -,-, 700345 LINE CR1 585 chrUn_NT_471584v1 1586 2731 CR1-C2 686 + 1586 2731 0 2 133,86, 0,1059, +,+, 700346 LINE CR1 585 chrUn_NT_471584v1 5605 6791 Char12Mar1_GG 454 - 5605 6791 0 2 115,544, 0,642, -,-, 700350 DNA hAT-Charlie 585 chrUn_NT_471585v1 3333 7464 GGXHOI 423 - 3333 7464 0 5 833,714,254,1106,1153, 0,863,1588,1857,2978, -,-,-,-,-, 700352 Satellite W-chromosome 585 chrUn_NT_471586v1 5646 6892 GGXHOI 320 - 5646 6892 0 4 271,314,329,248, 0,311,655,998, -,-,-,-, 700358 Satellite W-chromosome 585 chrUn_NT_471590v1 2018 2708 GGXHOI 408 + 2018 2708 0 2 152,495, 0,195, +,+, 700403 Satellite W-chromosome 585 chrUn_NT_471590v1 3590 4088 GGXHOI 345 + 3590 4088 0 2 261,203, 0,295, +,+, 700404 Satellite W-chromosome 585 chrUn_NT_471590v1 5573 6442 GGXHOI 369 + 5573 6442 0 2 318,538, 0,331, +,+, 700407 Satellite W-chromosome 585 chrUn_NT_471591v1 5569 7270 GGXHOI 399 - 5569 7270 0 2 815,847, 0,854, -,-, 700411 Satellite W-chromosome 585 chrUn_NT_471594v1 1326 4831 GGXHOI 392 + 1326 4831 0 6 952,64,434,1065,765,132, 0,966,1050,1495,2581,3373, +,+,+,+,+,+, 700420 Satellite W-chromosome 585 chrUn_NT_471594v1 5497 7444 GGXHOI 369 + 5497 7444 0 3 518,470,883, 0,574,1064, +,+,+, 700422 Satellite W-chromosome 585 chrUn_NT_471596v1 5263 7452 CR1-D 539 - 5263 7452 0 3 483,630,809, 0,750,1380, -,-,-, 700429 LINE CR1 585 chrUn_NT_471597v1 600 1681 GGXHOI 556 - 600 1681 0 3 197,60,205, 0,478,876, -,-,-, 700432 Satellite W-chromosome 585 chrUn_NT_471597v1 1770 5195 GGXHOI 554 - 1770 5195 0 5 538,328,59,830,205, 0,878,1651,2049,3220, -,-,-,-,-, 700435 Satellite W-chromosome 585 chrUn_NT_471597v1 5283 7450 GGXHOI 540 - 5283 7450 0 4 33,225,826,127, 0,313,877,2040, -,-,-,-, 700440 Satellite W-chromosome 585 chrUn_NT_471599v1 3684 6783 GGXHOI 520 - 3684 6783 0 3 118,2387,362, 0,162,2737, -,-,-, 700454 Satellite W-chromosome 585 chrUn_NT_471600v1 3250 4010 GGXHOI 337 + 3250 4010 0 3 212,155,348, 0,233,412, +,+,+, 700459 Satellite W-chromosome 585 chrUn_NT_471600v1 5409 7441 GGXHOI 374 + 5409 7441 0 3 948,159,860, 0,992,1172, +,+,+, 700464 Satellite W-chromosome 585 chrUn_NT_471601v1 1119 1944 (CGAGG)n 518 + 1119 1944 0 2 626,177, 0,648, +,+, 700472 Simple_repeat Simple_repeat 585 chrUn_NT_471601v1 2090 2587 (CGAGG)n 554 + 2090 2587 0 2 123,353, 0,144, +,+, 700473 Simple_repeat Simple_repeat 585 chrUn_NT_471601v1 3940 4830 (CGAGG)n 523 + 3940 4830 0 3 481,180,179, 0,493,711, +,+,+, 700483 Simple_repeat Simple_repeat 585 chrUn_NT_471601v1 5188 5809 (CGAGG)n 531 + 5188 5809 0 2 399,176, 0,445, +,+, 700487 Simple_repeat Simple_repeat 585 chrUn_NT_471601v1 6904 7361 (CGAGG)n 510 + 6904 7361 0 2 231,182, 0,275, +,+, 700495 Simple_repeat Simple_repeat 585 chrUn_NT_471602v1 5034 5884 GGLTR7-int 741 + 5034 5884 0 3 213,267,348, 0,235,502, +,+,+, 700498 LTR ERV1 585 chrUn_NT_471604v1 502 1235 GGXHOI 306 - 502 1235 0 2 137,579, 0,154, -,-, 700505 Satellite W-chromosome 585 chrUn_NT_471604v1 1582 3518 GGXHOI 353 - 1582 3518 0 6 130,88,347,137,970,112, 0,193,293,652,839,1824, -,-,-,-,-,-, 700507 Satellite W-chromosome 585 chrUn_NT_471604v1 3610 4726 GGXHOI 291 - 3610 4726 0 3 197,485,385, 0,213,731, -,-,-, 700508 Satellite W-chromosome 585 chrUn_NT_471604v1 4804 5917 GGXHOI 377 - 4804 5917 0 7 158,129,200,61,149,135,131, 0,215,356,568,642,833,982, -,-,-,-,-,-,-, 700509 Satellite W-chromosome 585 chrUn_NT_471604v1 6797 7100 GGXHOI 306 - 6797 7100 0 2 131,121, 0,182, -,-, 700511 Satellite W-chromosome 585 chrUn_NT_471607v1 714 1002 (ACCCATAGAG)n 690 - 714 1002 0 2 127,44, 0,244, -,-, 700531 Satellite Satellite 585 chrUn_NT_471608v1 3717 5202 (ACCCCATAGGG)n 472 + 3717 5202 0 4 118,491,367,398, 0,155,683,1087, +,+,+,+, 700543 Satellite Satellite 585 chrUn_NT_471608v1 5301 5917 (ACCCCATAGGG)n 488 + 5301 5917 0 3 118,125,327, 0,164,289, +,+,+, 700545 Satellite Satellite 585 chrUn_NT_471608v1 7006 7428 (GCCCCACAGCT)n 325 + 7006 7428 0 2 261,126, 0,296, +,+, 700548 Satellite Satellite 585 chrUn_NT_471612v1 1345 2450 GGXHOI 312 - 1345 2450 0 2 494,558, 0,547, -,-, 700582 Satellite W-chromosome 585 chrUn_NT_471612v1 2926 4116 GGXHOI 322 - 2926 4116 0 3 353,594,189, 0,378,1001, -,-,-, 700584 Satellite W-chromosome 585 chrUn_NT_471612v1 4367 7156 GGXHOI 323 - 4367 7156 0 4 307,307,1195,839, 0,370,738,1950, -,-,-,-, 700585 Satellite W-chromosome 585 chrUn_NT_471613v1 276 899 CR1-H 675 - 276 899 0 2 139,478, 0,145, -,-, 700587 LINE CR1 585 chrUn_NT_471613v1 4088 5431 CR1-H 680 - 4088 5431 0 2 115,1228, 0,115, -,-, 700592 LINE CR1 585 chrUn_NT_471613v1 7166 7274 (TTTGC)n 358 + 7166 7274 0 2 45,8, 0,100, +,+, 700593 Simple_repeat Simple_repeat 585 chrUn_NT_471614v1 3787 3903 G-rich 496 + 3787 3903 0 2 36,49, 0,67, +,+, 700604 Low_complexity Low_complexity 585 chrUn_NT_471617v1 5020 7218 GGXHOI 409 - 5020 7218 0 3 611,167,1375, 0,631,823, -,-,-, 700625 Satellite W-chromosome 585 chrUn_NT_471618v1 3231 7410 GGXHOI 354 - 3231 7410 0 5 158,2062,745,638,445, 0,215,2290,3071,3734, -,-,-,-,-, 700629 Satellite W-chromosome 585 chrUn_NT_471619v1 5838 6458 CR1-H 663 - 5838 6458 0 2 140,474, 0,146, -,-, 700633 LINE CR1 585 chrUn_NT_471621v1 6755 6909 GA-rich 423 + 6755 6909 0 2 34,74, 0,80, +,+, 700669 Low_complexity Low_complexity 585 chrUn_NT_471622v1 1747 5271 GGERV20_I-int 947 - 1747 5271 0 3 218,2029,948, 0,218,2576, -,-,-, 700675 LTR ERVL 585 chrUn_NT_471623v1 28 1106 (CGAGG)n 556 + 28 1106 0 2 858,220, 0,858, +,+, 700679 Simple_repeat Simple_repeat 585 chrUn_NT_471623v1 1510 2083 (CAAGG)n 430 + 1510 2083 0 2 246,142, 0,431, +,+, 700684 Simple_repeat Simple_repeat 585 chrUn_NT_471623v1 2464 3348 (CGAGG)n 591 + 2464 3348 0 3 157,159,367, 0,344,517, +,+,+, 700688 Simple_repeat Simple_repeat 585 chrUn_NT_471623v1 3113 3987 (CAAGG)n 456 + 3113 3987 0 2 248,156, 0,718, +,+, 700690 Simple_repeat Simple_repeat 585 chrUn_NT_471623v1 4597 5381 (CGAGG)n 545 + 4597 5381 0 4 127,51,176,187, 0,305,399,597, +,+,+,+, 700697 Simple_repeat Simple_repeat 585 chrUn_NT_471623v1 5404 7416 (CGAGG)n 507 + 5404 7416 0 6 163,32,182,182,790,348, 0,333,385,621,823,1664, +,+,+,+,+,+, 700700 Simple_repeat Simple_repeat 585 chrUn_NT_471625v1 5225 6121 (ACCCCATAGGG)n 460 + 5225 6121 0 5 243,232,117,120,117, 0,257,503,645,779, +,+,+,+,+, 700707 Satellite Satellite 585 chrUn_NT_471625v1 6267 6563 (ACCCCATAGGG)n 413 + 6267 6563 0 2 81,151, 0,145, +,+, 700708 Satellite Satellite 585 chrUn_NT_471625v1 6684 7089 (ACCCCATAGGG)n 447 + 6684 7089 0 2 120,239, 0,166, +,+, 700710 Satellite Satellite 585 chrUn_NT_471627v1 644 4991 GGXHOI 388 - 644 4991 0 8 315,393,681,852,142,677,477,689, 0,335,748,1444,2309,2471,3167,3658, -,-,-,-,-,-,-,-, 700738 Satellite W-chromosome 585 chrUn_NT_471627v1 5174 7393 GGXHOI 398 - 5174 7393 0 5 602,310,314,479,404, 0,621,988,1321,1815, -,-,-,-,-, 700739 Satellite W-chromosome 585 chrUn_NT_471630v1 2452 3327 GGXHOI 540 + 2452 3327 0 2 210,397, 0,478, +,+, 700758 Satellite W-chromosome 585 chrUn_NT_471630v1 3375 4802 GGXHOI 567 + 3375 4802 0 3 922,158,15, 0,933,1412, +,+,+, 700761 Satellite W-chromosome 585 chrUn_NT_471630v1 4879 5948 GGXHOI 537 + 4879 5948 0 3 366,331,26, 0,403,1043, +,+,+, 700763 Satellite W-chromosome 585 chrUn_NT_471631v1 2044 7401 GGXHOI 508 + 2044 7401 0 4 652,1112,281,115, 0,973,4942,5242, +,+,+,+, 700774 Satellite W-chromosome 585 chrUn_NT_471632v1 3717 6326 GGXHOI 442 + 3717 6326 0 2 679,1913, 0,696, +,+, 700777 Satellite W-chromosome 585 chrUn_NT_471632v1 6438 7411 GGXHOI 419 + 6438 7411 0 2 687,267, 0,706, +,+, 700778 Satellite W-chromosome 585 chrUn_NT_471633v1 5630 6060 (ACATG)n 208 + 5630 6060 0 2 193,186, 0,244, +,+, 700785 Simple_repeat Simple_repeat 585 chrUn_NT_471636v1 2310 3368 GGXHOI 431 - 2310 3368 0 3 166,610,200, 0,210,858, -,-,-, 700797 Satellite W-chromosome 585 chrUn_NT_471636v1 3444 7403 GGXHOI 407 - 3444 7403 0 3 582,1627,1693, 0,606,2266, -,-,-, 700798 Satellite W-chromosome 585 chrUn_NT_471641v1 749 1955 (CGAGG)n 571 + 749 1955 0 3 608,184,365, 0,625,841, +,+,+, 700818 Simple_repeat Simple_repeat 585 chrUn_NT_471641v1 2261 2835 (CGAGG)n 520 + 2261 2835 0 2 345,178, 0,396, +,+, 700819 Simple_repeat Simple_repeat 585 chrUn_NT_471641v1 3115 4444 (CGAGG)n 526 + 3115 4444 0 5 177,496,171,174,177, 0,201,739,929,1152, +,+,+,+,+, 700821 Simple_repeat Simple_repeat 585 chrUn_NT_471641v1 4558 5314 (CGAGG)n 522 + 4558 5314 0 3 330,177,176, 0,383,580, +,+,+, 700823 Simple_repeat Simple_repeat 585 chrUn_NT_471641v1 5439 5769 (CGGGG)n 440 + 5439 5769 0 2 80,67, 0,263, +,+, 700825 Simple_repeat Simple_repeat 585 chrUn_NT_471641v1 5875 6895 (CGAGG)n 528 + 5875 6895 0 3 301,240,120, 0,480,900, +,+,+, 700828 Simple_repeat Simple_repeat 585 chrUn_NT_471644v1 4025 7400 GGXHOI 433 - 4025 7400 0 3 677,513,2151, 0,699,1224, -,-,-, 700848 Satellite W-chromosome 585 chrUn_NT_471645v1 255 613 (ACCCCATAGGG)n 556 + 255 613 0 2 188,26, 0,332, +,+, 700851 Satellite Satellite 585 chrUn_NT_471645v1 688 2160 (ACCCCATAGGG)n 536 + 688 2160 0 5 141,316,392,259,186, 0,163,479,901,1286, +,+,+,+,+, 700853 Satellite Satellite 585 chrUn_NT_471645v1 3959 4317 (CCCCATTGGG)n 522 + 3959 4317 0 2 141,98, 0,260, +,+, 700856 Satellite Satellite 585 chrUn_NT_471645v1 4670 4976 (CCCCATTGGG)n 590 + 4670 4976 0 2 116,136, 0,170, +,+, 700861 Satellite Satellite 585 chrUn_NT_471646v1 386 778 (ACCCATAGAG)n 624 + 386 778 0 2 216,37, 0,355, +,+, 700868 Satellite Satellite 585 chrUn_NT_471646v1 780 1393 (ACCCATAGAG)n 561 - 780 1393 0 3 152,195,254, 0,152,359, -,-,-, 700870 Satellite Satellite 585 chrUn_NT_471647v1 2083 3379 GGLTR7-int 293 + 2083 3379 0 3 101,137,292, 0,127,1004, +,+,+, 700877 LTR ERV1 585 chrUn_NT_471648v1 3160 5988 GGXHOI 371 - 3160 5988 0 3 683,1903,196, 0,697,2632, -,-,-, 700881 Satellite W-chromosome 585 chrUn_NT_471649v1 6928 7393 (TCCA)n 658 + 6928 7393 0 2 205,83, 0,382, +,+, 700890 Simple_repeat Simple_repeat 585 chrUn_NT_471650v1 4715 7375 GGXHOI 392 - 4715 7375 0 4 434,515,1401,217, 0,450,1026,2443, -,-,-,-, 700893 Satellite W-chromosome 585 chrUn_NT_471651v1 3492 4130 G-rich 518 + 3492 4130 0 2 35,545, 0,93, +,+, 700896 Low_complexity Low_complexity 585 chrUn_NT_471651v1 6889 7210 (GT)n 490 + 6889 7210 0 2 66,212, 0,109, +,+, 700901 Simple_repeat Simple_repeat 585 chrUn_NT_471653v1 759 1473 (GCGAG)n 340 + 759 1473 0 2 105,505, 0,209, +,+, 700909 Simple_repeat Simple_repeat 585 chrUn_NT_471653v1 1479 2016 (CGAGG)n 474 + 1479 2016 0 2 185,295, 0,242, +,+, 700911 Simple_repeat Simple_repeat 585 chrUn_NT_471653v1 2516 3470 (CGAGG)n 570 + 2516 3470 0 5 177,151,180,174,172, 0,196,391,597,782, +,+,+,+,+, 700915 Simple_repeat Simple_repeat 585 chrUn_NT_471653v1 3691 5618 (CGAGG)n 480 + 3691 5618 0 5 473,632,429,99,224, 0,498,1146,1591,1703, +,+,+,+,+, 700917 Simple_repeat Simple_repeat 585 chrUn_NT_471653v1 5781 6997 (CGAGG)n 517 + 5781 6997 0 4 300,180,415,85, 0,311,533,1131, +,+,+,+, 700919 Simple_repeat Simple_repeat 585 chrUn_NT_471654v1 349 1361 GGXHOI 350 - 349 1361 0 2 130,843, 0,169, -,-, 700924 Satellite W-chromosome 585 chrUn_NT_471654v1 2127 3964 GGXHOI 326 - 2127 3964 0 7 196,423,140,252,245,115,260, 0,252,691,881,1147,1425,1577, -,-,-,-,-,-,-, 700928 Satellite W-chromosome 585 chrUn_NT_471654v1 4343 4659 GGXHOI 289 - 4343 4659 0 2 140,129, 0,187, -,-, 700930 Satellite W-chromosome 585 chrUn_NT_471654v1 4776 5749 GGXHOI 391 - 4776 5749 0 2 470,488, 0,485, -,-, 700931 Satellite W-chromosome 585 chrUn_NT_471654v1 5831 6519 GGXHOI 406 - 5831 6519 0 3 231,136,289, 0,248,399, -,-,-, 700932 Satellite W-chromosome 585 chrUn_NT_471654v1 6590 7383 GGXHOI 386 - 6590 7383 0 2 176,601, 0,192, -,-, 700933 Satellite W-chromosome 585 chrUn_NT_471656v1 819 2670 GGXHOI 405 - 819 2670 0 3 832,805,146, 0,874,1705, -,-,-, 700936 Satellite W-chromosome 585 chrUn_NT_471656v1 3222 5989 GGXHOI 432 - 3222 5989 0 6 555,182,247,238,267,1179, 0,574,773,1059,1309,1588, -,-,-,-,-,-, 700939 Satellite W-chromosome 585 chrUn_NT_471656v1 6093 7393 GGXHOI 416 - 6093 7393 0 4 526,476,147,97, 0,538,1032,1203, -,-,-,-, 700940 Satellite W-chromosome 585 chrUn_NT_471657v1 612 7374 GGXHOI 431 - 612 7374 0 4 4987,238,1294,203, 0,5005,5254,6559, -,-,-,-, 700942 Satellite W-chromosome 585 chrUn_NT_471658v1 684 1437 (CAAGG)n 511 + 684 1437 0 4 185,131,43,139, 0,240,555,614, +,+,+,+, 700946 Simple_repeat Simple_repeat 585 chrUn_NT_471658v1 1477 2334 (CCTTG)n 469 + 1477 2334 0 3 241,179,365, 0,277,492, +,+,+, 700948 Simple_repeat Simple_repeat 585 chrUn_NT_471658v1 4187 4717 (CCTTG)n 474 + 4187 4717 0 3 186,105,54, 0,203,476, +,+,+, 700952 Simple_repeat Simple_repeat 585 chrUn_NT_471658v1 4972 5462 (CCTTG)n 488 + 4972 5462 0 2 243,226, 0,264, +,+, 700955 Simple_repeat Simple_repeat 585 chrUn_NT_471658v1 6329 6809 (CAAGG)n 588 + 6329 6809 0 3 67,158,24, 0,121,456, +,+,+, 700961 Simple_repeat Simple_repeat 585 chrUn_NT_471658v1 6866 7299 (CCTTG)n 524 + 6866 7299 0 2 242,175, 0,258, +,+, 700963 Simple_repeat Simple_repeat 585 chrUn_NT_471660v1 1976 3966 GGXHOI 334 + 1976 3966 0 5 272,777,103,165,580, 0,286,1095,1229,1410, +,+,+,+,+, 700970 Satellite W-chromosome 585 chrUn_NT_471660v1 5263 5973 GGXHOI 416 + 5263 5973 0 2 176,516, 0,194, +,+, 700972 Satellite W-chromosome 585 chrUn_NT_471660v1 6052 7270 GGXHOI 394 + 6052 7270 0 3 781,185,222, 0,799,996, +,+,+, 700973 Satellite W-chromosome 585 chrUn_NT_471661v1 1461 1756 CR1-X2 449 + 1461 1756 0 2 65,230, 0,65, +,+, 700976 LINE CR1 585 chrUn_NT_471662v1 1008 1309 (CTCTATGGGG)n 703 - 1008 1309 0 2 163,124, 0,177, -,-, 700985 Satellite Satellite 585 chrUn_NT_471662v1 1983 2230 (CTCTATGGGG)n 752 - 1983 2230 0 2 84,42, 0,205, -,-, 700990 Satellite Satellite 585 chrUn_NT_471666v1 999 1118 (CAGCA)n 847 + 999 1118 0 2 41,31, 0,88, +,+, 701011 Simple_repeat Simple_repeat 585 chrUn_NT_471666v1 4627 5296 (CTCTATGGGG)n 601 - 4627 5296 0 5 120,120,80,43,109, 0,160,311,506,560, -,-,-,-,-, 701013 Satellite Satellite 585 chrUn_NT_471668v1 2567 3847 GGXHOI 319 - 2567 3847 0 2 270,948, 0,332, -,-, 701028 Satellite W-chromosome 585 chrUn_NT_471672v1 951 3395 GGXHOI 411 - 951 3395 0 8 260,244,405,181,340,318,354,167, 0,298,582,1000,1198,1555,1888,2277, -,-,-,-,-,-,-,-, 701056 Satellite W-chromosome 585 chrUn_NT_471672v1 3566 4607 GGXHOI 348 - 3566 4607 0 4 154,130,514,134, 0,205,378,907, -,-,-,-, 701057 Satellite W-chromosome 585 chrUn_NT_471672v1 5019 6867 GGXHOI 389 - 5019 6867 0 7 470,204,131,141,155,137,458, 0,515,736,887,1041,1209,1390, -,-,-,-,-,-,-, 701059 Satellite W-chromosome 585 chrUn_NT_471674v1 983 1637 (CCTTG)n 625 + 983 1637 0 3 209,184,209, 0,243,445, +,+,+, 701076 Simple_repeat Simple_repeat 585 chrUn_NT_471674v1 1696 2299 (CCTTG)n 598 + 1696 2299 0 2 190,389, 0,214, +,+, 701078 Simple_repeat Simple_repeat 585 chrUn_NT_471674v1 2317 3726 (CCTTG)n 616 + 2317 3726 0 6 345,189,213,248,187,227, 0,345,534,747,995,1182, +,+,+,+,+,+, 701080 Simple_repeat Simple_repeat 585 chrUn_NT_471674v1 4313 4858 (GCCTG)n 460 + 4313 4858 0 2 228,73, 0,472, +,+, 701085 Simple_repeat Simple_repeat 585 chrUn_NT_471674v1 4810 6525 (CCTTG)n 597 + 4810 6525 0 6 88,45,571,180,173,183, 0,438,508,1138,1343,1532, +,+,+,+,+,+, 701087 Simple_repeat Simple_repeat 585 chrUn_NT_471674v1 6787 7319 (GCCTG)n 362 + 6787 7319 0 2 222,147, 0,385, +,+, 701091 Simple_repeat Simple_repeat 585 chrUn_NT_471676v1 1511 3352 GGXHOI 356 - 1511 3352 0 4 787,125,182,635, 0,848,995,1206, -,-,-,-, 701100 Satellite W-chromosome 585 chrUn_NT_471676v1 3430 6131 GGXHOI 399 - 3430 6131 0 7 303,99,136,229,766,733,310, 0,326,440,590,854,1641,2391, -,-,-,-,-,-,-, 701101 Satellite W-chromosome 585 chrUn_NT_471676v1 6250 7366 GGXHOI 358 - 6250 7366 0 2 760,311, 0,805, -,-, 701102 Satellite W-chromosome 585 chrUn_NT_471678v1 1872 6067 GGXHOI 368 + 1872 6067 0 6 466,967,465,770,355,987, 0,482,1505,2006,2837,3208, +,+,+,+,+,+, 701108 Satellite W-chromosome 585 chrUn_NT_471680v1 2588 3083 GGLTR3F2 614 + 2588 3083 0 2 227,217, 0,278, +,+, 701116 LTR ERVL 585 chrUn_NT_471681v1 2133 4281 GGXHOI 385 - 2133 4281 0 2 1003,1083, 0,1065, -,-, 701122 Satellite W-chromosome 585 chrUn_NT_471681v1 4421 5839 GGXHOI 377 - 4421 5839 0 2 970,390, 0,1028, -,-, 701123 Satellite W-chromosome 585 chrUn_NT_471682v1 309 2189 GGXHOI 214 + 309 2189 0 4 162,252,160,1200, 0,182,494,680, +,+,+,+, 701128 Satellite W-chromosome 585 chrUn_NT_471682v1 2258 7351 GGXHOI 382 + 2258 7351 0 4 619,764,3484,109, 0,652,1455,4984, +,+,+,+, 701129 Satellite W-chromosome 585 chrUn_NT_471683v1 6676 7235 CR1-X 447 - 6676 7235 0 3 217,131,170, 0,258,389, -,-,-, 701135 LINE CR1 585 chrUn_NT_471684v1 1711 5791 GGXHOI 400 + 1711 5791 0 2 2057,2007, 0,2073, +,+, 701137 Satellite W-chromosome 585 chrUn_NT_471687v1 2894 4328 GGXHOI 391 - 2894 4328 0 2 1154,233, 0,1201, -,-, 701147 Satellite W-chromosome 585 chrUn_NT_471687v1 4735 7347 GGXHOI 372 - 4735 7347 0 6 620,136,286,1059,127,295, 0,635,792,1093,2169,2317, -,-,-,-,-,-, 701149 Satellite W-chromosome 585 chrUn_NT_471691v1 4284 4791 CR1-F 322 + 4284 4791 0 2 257,184, 0,323, +,+, 701169 LINE CR1 585 chrUn_NT_471692v1 1156 1909 Sat-CR1_GG 188 - 1156 1909 0 2 488,99, 0,654, -,-, 701177 Satellite Satellite 585 chrUn_NT_471693v1 4435 4670 G-rich 440 + 4435 4670 0 2 38,147, 0,88, +,+, 701200 Low_complexity Low_complexity 585 chrUn_NT_471694v1 334 774 (CAGTG)n 254 + 334 774 0 2 196,229, 0,211, +,+, 701208 Simple_repeat Simple_repeat 585 chrUn_NT_471694v1 3611 4062 (CAATG)n 239 + 3611 4062 0 2 228,204, 0,247, +,+, 701217 Simple_repeat Simple_repeat 585 chrUn_NT_471695v1 2346 3049 (CGAGG)n 499 + 2346 3049 0 2 173,493, 0,210, +,+, 701230 Simple_repeat Simple_repeat 585 chrUn_NT_471695v1 6005 6707 (CGAGG)n 473 + 6005 6707 0 3 177,264,187, 0,227,515, +,+,+, 701238 Simple_repeat Simple_repeat 585 chrUn_NT_471696v1 1088 1468 CT-rich 672 + 1088 1468 0 2 180,189, 0,191, +,+, 701241 Low_complexity Low_complexity 585 chrUn_NT_471696v1 1411 2471 (TCC)n 664 + 1411 2471 0 2 458,590, 0,470, +,+, 701242 Simple_repeat Simple_repeat 585 chrUn_NT_471696v1 2788 3415 (CAATG)n 304 + 2788 3415 0 2 175,412, 0,215, +,+, 701244 Simple_repeat Simple_repeat 585 chrUn_NT_471696v1 3298 3709 (CACTG)n 357 + 3298 3709 0 2 183,178, 0,233, +,+, 701245 Simple_repeat Simple_repeat 585 chrUn_NT_471696v1 3981 4422 (CACTG)n 356 + 3981 4422 0 2 181,222, 0,219, +,+, 701249 Simple_repeat Simple_repeat 585 chrUn_NT_471696v1 4904 5017 (CAGCA)n 1000 + 4904 5017 0 2 26,36, 0,77, +,+, 701252 Simple_repeat Simple_repeat 585 chrUn_NT_471696v1 5742 5864 (CAGCA)n 930 + 5742 5864 0 2 41,30, 0,92, +,+, 701257 Simple_repeat Simple_repeat 585 chrUn_NT_471700v1 884 3766 GGXHOI 415 - 884 3766 0 6 422,227,214,858,801,237, 0,440,694,957,1831,2645, -,-,-,-,-,-, 701281 Satellite W-chromosome 585 chrUn_NT_471700v1 4158 5972 GGXHOI 485 - 4158 5972 0 4 139,148,135,1262, 0,195,375,552, -,-,-,-, 701283 Satellite W-chromosome 585 chrUn_NT_471703v1 1058 4357 Sat-CR1_GG 156 - 1058 4357 0 2 2614,25, 0,3274, -,-, 701292 Satellite Satellite 585 chrUn_NT_471703v1 5135 7332 GGXHOI 550 - 5135 7332 0 3 609,163,464, 0,1004,1733, -,-,-, 701296 Satellite W-chromosome 585 chrUn_NT_471704v1 1233 6076 GGXHOI 401 - 1233 6076 0 6 342,966,888,146,546,1856, 0,362,1352,2253,2419,2987, -,-,-,-,-,-, 701300 Satellite W-chromosome 585 chrUn_NT_471704v1 6264 7204 GGXHOI 351 - 6264 7204 0 2 177,702, 0,238, -,-, 701301 Satellite W-chromosome 585 chrUn_NT_471705v1 166 1057 CR1-F 555 + 166 1057 0 3 199,198,176, 0,241,715, +,+,+, 701303 LINE CR1 585 chrUn_NT_471705v1 1101 1501 CR1-F 739 + 1101 1501 0 2 175,181, 0,219, +,+, 701305 LINE CR1 585 chrUn_NT_471705v1 1546 2456 CR1-F 541 + 1546 2456 0 4 201,198,203,181, 0,245,484,729, +,+,+,+, 701306 LINE CR1 585 chrUn_NT_471705v1 2500 7329 CR1-F 555 + 2500 7329 0 14 178,191,200,203,204,204,155,200,180,149,204,204,157,172, 0,223,456,954,1199,1445,1916,2361,2836,3060,3495,3741,4213,4657, +,+,+,+,+,+,+,+,+,+,+,+,+,+, 701307 LINE CR1 585 chrUn_NT_471706v1 716 1000 (ACCCCATAGGG)n 383 + 716 1000 0 2 114,118, 0,166, +,+, 701316 Satellite Satellite 585 chrUn_NT_471709v1 1342 1378 (CCCCCTC)n 562 + 1342 1378 0 2 7,6, 0,30, +,+, 701342 Simple_repeat Simple_repeat 585 chrUn_NT_471709v1 4060 4515 A-rich 354 + 4060 4515 0 2 57,341, 0,114, +,+, 701348 Low_complexity Low_complexity 585 chrUn_NT_471709v1 7283 7347 (CGG)n 362 + 7283 7347 0 2 17,10, 0,54, +,+, 701365 Simple_repeat Simple_repeat 585 chrUn_NT_471710v1 2292 2611 (ACCCCATAGGG)n 463 - 2292 2611 0 2 127,130, 0,189, -,-, 701370 Satellite Satellite 585 chrUn_NT_471710v1 3147 3576 (ACCCCATAGGG)n 592 - 3147 3576 0 3 46,133,133, 0,103,296, -,-,-, 701373 Satellite Satellite 585 chrUn_NT_471710v1 4113 4544 (ACCCCATAGGG)n 581 - 4113 4544 0 3 46,133,133, 0,104,298, -,-,-, 701376 Satellite Satellite 585 chrUn_NT_471710v1 5081 5510 (ACCCCATAGGG)n 581 - 5081 5510 0 3 46,133,133, 0,103,296, -,-,-, 701379 Satellite Satellite 585 chrUn_NT_471710v1 5649 5976 (ACCCCATAGGG)n 501 - 5649 5976 0 2 126,140, 0,187, -,-, 701380 Satellite Satellite 585 chrUn_NT_471710v1 6145 6653 (ACCCCATAGGG)n 477 - 6145 6653 0 3 134,132,120, 0,195,388, -,-,-, 701381 Satellite Satellite 585 chrUn_NT_471711v1 1132 1396 (ACCCATAGGG)n 780 + 1132 1396 0 2 130,13, 0,251, +,+, 701387 Satellite Satellite 585 chrUn_NT_471711v1 1679 1943 (ACCCATAGGG)n 780 + 1679 1943 0 2 130,13, 0,251, +,+, 701390 Satellite Satellite 585 chrUn_NT_471711v1 2226 2490 (ACCCATAGGG)n 780 + 2226 2490 0 2 130,13, 0,251, +,+, 701393 Satellite Satellite 585 chrUn_NT_471711v1 5380 5961 (ACCCATAGAG)n 790 + 5380 5961 0 4 120,153,73,106, 0,131,284,475, +,+,+,+, 701407 Satellite Satellite 585 chrUn_NT_471711v1 6834 7075 (CTCTATGGGG)n 548 - 6834 7075 0 2 82,41, 0,200, -,-, 701415 Satellite Satellite 585 chrUn_NT_471716v1 1937 4500 GGXHOI 411 - 1937 4500 0 7 129,1227,174,342,160,205,86, 0,177,1449,1634,2033,2250,2477, -,-,-,-,-,-,-, 701449 Satellite W-chromosome 585 chrUn_NT_471716v1 5489 6299 GGXHOI 400 - 5489 6299 0 2 116,678, 0,132, -,-, 701451 Satellite W-chromosome 585 chrUn_NT_471716v1 6386 7293 GGXHOI 444 - 6386 7293 0 2 722,169, 0,738, -,-, 701452 Satellite W-chromosome 585 chrUn_NT_471718v1 3070 7095 GGXHOI 558 + 3070 7095 0 5 52,22,179,361,29, 0,2411,2661,3299,3996, +,+,+,+,+, 701472 Satellite W-chromosome 585 chrUn_NT_471720v1 669 6357 GGXHOI 425 + 669 6357 0 2 4281,1369, 0,4319, +,+, 701481 Satellite W-chromosome 585 chrUn_NT_471722v1 1606 7294 GGXHOI 335 - 1606 7294 0 3 114,4644,887, 0,135,4801, -,-,-, 701490 Satellite W-chromosome 585 chrUn_NT_471723v1 3076 3325 CR1-X 481 + 3076 3325 0 2 172,77, 0,172, +,+, 701492 LINE CR1 585 chrUn_NT_471724v1 3610 4365 GGXHOI 393 - 3610 4365 0 2 639,103, 0,652, -,-, 701496 Satellite W-chromosome 585 chrUn_NT_471724v1 4469 6367 GGXHOI 381 - 4469 6367 0 2 1464,415, 0,1483, -,-, 701497 Satellite W-chromosome 585 chrUn_NT_471724v1 6451 7263 GGXHOI 416 - 6451 7263 0 3 359,276,151, 0,370,661, -,-,-, 701498 Satellite W-chromosome 585 chrUn_NT_471729v1 1577 2134 (ACCCCATAGGG)n 483 + 1577 2134 0 3 128,186,97, 0,142,460, +,+,+, 701522 Satellite Satellite 585 chrUn_NT_471729v1 2312 2565 (CTCTATGGGG)n 460 - 2312 2565 0 2 117,122, 0,131, -,-, 701526 Satellite Satellite 585 chrUn_NT_471729v1 3600 3830 (CTCTATGGGG)n 432 - 3600 3830 0 2 82,28, 0,202, -,-, 701529 Satellite Satellite 585 chrUn_NT_471730v1 920 1446 GGXHOI 363 - 920 1446 0 2 145,354, 0,172, -,-, 701534 Satellite W-chromosome 585 chrUn_NT_471730v1 1518 4261 GGXHOI 434 - 1518 4261 0 3 605,609,1494, 0,618,1249, -,-,-, 701535 Satellite W-chromosome 585 chrUn_NT_471730v1 5789 7303 GGERVL-B-int 768 + 5789 7303 0 3 488,556,469, 0,489,1045, +,+,+, 701538 LTR ERVL 585 chrUn_NT_471731v1 1548 2922 GGXHOI 404 - 1548 2922 0 3 136,975,227, 0,152,1147, -,-,-, 701540 Satellite W-chromosome 585 chrUn_NT_471731v1 2995 5401 GGXHOI 387 - 2995 5401 0 7 137,124,303,665,569,117,311, 0,154,340,658,1365,1965,2095, -,-,-,-,-,-,-, 701541 Satellite W-chromosome 585 chrUn_NT_471731v1 5484 7050 GGXHOI 365 - 5484 7050 0 6 521,133,322,141,133,164, 0,570,720,1056,1211,1402, -,-,-,-,-,-, 701542 Satellite W-chromosome 585 chrUn_NT_471732v1 1292 2202 (CAT)n 719 + 1292 2202 0 4 22,239,180,370, 0,46,327,540, +,+,+,+, 701548 Simple_repeat Simple_repeat 585 chrUn_NT_471732v1 2257 3153 (CAT)n 729 + 2257 3153 0 4 184,201,108,204, 0,200,584,692, +,+,+,+, 701550 Simple_repeat Simple_repeat 585 chrUn_NT_471733v1 2199 3592 GGLTR7-int 330 - 2199 3592 0 3 278,209,108, 0,1050,1285, -,-,-, 701558 LTR ERV1 585 chrUn_NT_471733v1 4302 6787 GGERVL-B-int 793 - 4302 6787 0 3 917,1255,313, 0,917,2172, -,-,-, 701560 LTR ERVL 585 chrUn_NT_471734v1 1321 2862 (TTAGGG)n 647 + 1321 2862 0 5 73,233,230,391,376, 0,261,494,748,1165, +,+,+,+,+, 701567 Simple_repeat Simple_repeat 585 chrUn_NT_471734v1 3379 3997 (TTAGGG)n 635 + 3379 3997 0 3 192,179,183, 0,244,435, +,+,+, 701572 Simple_repeat Simple_repeat 585 chrUn_NT_471734v1 4050 5095 (TTAGGG)n 557 + 4050 5095 0 4 178,371,371,71, 0,208,591,974, +,+,+,+, 701574 Simple_repeat Simple_repeat 585 chrUn_NT_471734v1 5094 5951 (CCCTAA)n 719 + 5094 5951 0 3 227,37,360, 0,434,497, +,+,+, 701575 Simple_repeat Simple_repeat 585 chrUn_NT_471734v1 6422 6853 (CCCTAA)n 651 + 6422 6853 0 2 171,220, 0,211, +,+, 701581 Simple_repeat Simple_repeat 585 chrUn_NT_471734v1 7035 7300 (CCCTAA)n 620 + 7035 7300 0 2 36,52, 0,213, +,+, 701583 Simple_repeat Simple_repeat 585 chrUn_NT_471735v1 124 1004 (CGAGG)n 626 + 124 1004 0 2 310,401, 0,479, +,+, 701586 Simple_repeat Simple_repeat 585 chrUn_NT_471735v1 2628 3393 (CCTTG)n 645 + 2628 3393 0 3 180,200,385, 0,180,380, +,+,+, 701592 Simple_repeat Simple_repeat 585 chrUn_NT_471735v1 3530 4647 (CCTTG)n 615 + 3530 4647 0 5 182,261,203,208,217, 0,182,474,677,900, +,+,+,+,+, 701593 Simple_repeat Simple_repeat 585 chrUn_NT_471735v1 4731 5214 (CCTTG)n 638 + 4731 5214 0 2 205,54, 0,429, +,+, 701595 Simple_repeat Simple_repeat 585 chrUn_NT_471735v1 5520 6433 (CCTTG)n 655 + 5520 6433 0 3 193,118,429, 0,366,484, +,+,+, 701600 Simple_repeat Simple_repeat 585 chrUn_NT_471735v1 6521 7212 (CCTTG)n 606 + 6521 7212 0 2 314,41, 0,650, +,+, 701603 Simple_repeat Simple_repeat 585 chrUn_NT_471736v1 1759 4802 GGXHOI 479 + 1759 4802 0 3 2268,166,509, 0,2322,2534, +,+,+, 701608 Satellite W-chromosome 585 chrUn_NT_471736v1 4817 7288 GGXHOI 564 + 4817 7288 0 3 635,148,21, 0,922,2450, +,+,+, 701610 Satellite W-chromosome 585 chrUn_NT_471737v1 709 3290 GGERVL-B-int 635 + 709 3290 0 2 239,2342, 0,239, +,+, 701616 LTR ERVL 585 chrUn_NT_471737v1 3884 5271 GGLTR7-int 327 + 3884 5271 0 3 100,258,279, 0,102,1108, +,+,+, 701617 LTR ERV1 585 chrUn_NT_471738v1 5547 7293 GGXHOI 370 - 5547 7293 0 4 172,222,741,533, 0,192,454,1213, -,-,-,-, 701619 Satellite W-chromosome 585 chrUn_NT_471740v1 501 769 (CAAGG)n 653 + 501 769 0 2 46,222, 0,46, +,+, 701629 Simple_repeat Simple_repeat 585 chrUn_NT_471740v1 697 1036 (CAGGC)n 348 + 697 1036 0 2 89,73, 0,266, +,+, 701630 Simple_repeat Simple_repeat 585 chrUn_NT_471740v1 1290 1761 (CAAGG)n 532 + 1290 1761 0 2 229,135, 0,336, +,+, 701633 Simple_repeat Simple_repeat 585 chrUn_NT_471740v1 2153 2757 (CCTTG)n 537 + 2153 2757 0 2 225,353, 0,251, +,+, 701637 Simple_repeat Simple_repeat 585 chrUn_NT_471740v1 3580 4688 (CAAGG)n 489 + 3580 4688 0 4 372,214,285,25, 0,372,614,1083, +,+,+,+, 701644 Simple_repeat Simple_repeat 585 chrUn_NT_471740v1 4763 5769 (CCTTG)n 513 + 4763 5769 0 3 179,554,223, 0,201,783, +,+,+, 701647 Simple_repeat Simple_repeat 585 chrUn_NT_471743v1 1601 7289 GGLTR7-int 526 - 1601 7289 0 5 586,184,156,954,1756, 0,599,1654,1810,3932, -,-,-,-,-, 701670 LTR ERV1 585 chrUn_NT_471745v1 178 532 (TTAGGG)n 564 + 178 532 0 2 165,178, 0,176, +,+, 701686 Simple_repeat Simple_repeat 585 chrUn_NT_471745v1 623 1673 (TTAGGG)n 633 + 623 1673 0 4 218,179,381,185, 0,242,458,865, +,+,+,+, 701687 Simple_repeat Simple_repeat 585 chrUn_NT_471745v1 1707 2510 (CCCTAA)n 454 + 1707 2510 0 2 207,596, 0,207, +,+, 701688 Simple_repeat Simple_repeat 585 chrUn_NT_471745v1 3180 4025 (CCCTAA)n 695 + 3180 4025 0 3 192,188,374, 0,254,471, +,+,+, 701694 Simple_repeat Simple_repeat 585 chrUn_NT_471745v1 4067 5445 (CCCTAA)n 609 + 4067 5445 0 6 212,185,164,90,30,420, 0,239,471,649,916,958, +,+,+,+,+,+, 701696 Simple_repeat Simple_repeat 585 chrUn_NT_471745v1 5736 6722 GGXHOI 376 + 5736 6722 0 2 355,612, 0,374, +,+, 701699 Satellite W-chromosome 585 chrUn_NT_471746v1 4679 7274 GGXHOI 383 - 4679 7274 0 4 461,718,124,1241, 0,482,1217,1354, -,-,-,-, 701703 Satellite W-chromosome 585 chrUn_NT_471749v1 233 1574 (GGATG)n 611 + 233 1574 0 3 201,193,894, 0,214,447, +,+,+, 701707 Simple_repeat Simple_repeat 585 chrUn_NT_471750v1 1265 3052 GGXHOI 368 - 1265 3052 0 5 471,76,258,742,94, 0,514,644,920,1693, -,-,-,-,-, 701721 Satellite W-chromosome 585 chrUn_NT_471750v1 4500 6595 GGXHOI 370 - 4500 6595 0 3 507,1079,390, 0,570,1705, -,-,-, 701725 Satellite W-chromosome 585 chrUn_NT_471752v1 4043 4652 CR1-H 670 - 4043 4652 0 2 139,464, 0,145, -,-, 701736 LINE CR1 585 chrUn_NT_471754v1 6616 7099 GGXHOI 408 + 6616 7099 0 2 182,242, 0,241, +,+, 701775 Satellite W-chromosome 585 chrUn_NT_471755v1 2007 2727 (CGAGG)n 541 + 2007 2727 0 2 506,181, 0,539, +,+, 701784 Simple_repeat Simple_repeat 585 chrUn_NT_471755v1 2862 3482 (CGAGG)n 502 + 2862 3482 0 3 189,269,140, 0,200,480, +,+,+, 701785 Simple_repeat Simple_repeat 585 chrUn_NT_471755v1 3579 3987 (CGAGG)n 505 + 3579 3987 0 2 188,186, 0,222, +,+, 701787 Simple_repeat Simple_repeat 585 chrUn_NT_471755v1 4470 5199 (CGAGG)n 549 + 4470 5199 0 3 178,178,320, 0,209,409, +,+,+, 701791 Simple_repeat Simple_repeat 585 chrUn_NT_471755v1 5362 6531 (CGAGG)n 505 + 5362 6531 0 3 178,544,364, 0,210,805, +,+,+, 701793 Simple_repeat Simple_repeat 585 chrUn_NT_471756v1 5007 5820 GGXHOI 338 + 5007 5820 0 2 161,632, 0,181, +,+, 701806 Satellite W-chromosome 585 chrUn_NT_471759v1 3516 3860 (CA)n 458 + 3516 3860 0 2 222,90, 0,254, +,+, 701812 Simple_repeat Simple_repeat 585 chrUn_NT_471760v1 3737 4162 (CCGAA)n 418 + 3737 4162 0 2 188,177, 0,248, +,+, 701820 Simple_repeat Simple_repeat 585 chrUn_NT_471760v1 4235 4908 (CCGAA)n 484 + 4235 4908 0 4 184,47,179,179, 0,234,294,494, +,+,+,+, 701822 Simple_repeat Simple_repeat 585 chrUn_NT_471760v1 5026 6212 (CCGAA)n 398 + 5026 6212 0 4 172,390,47,338, 0,198,765,848, +,+,+,+, 701823 Simple_repeat Simple_repeat 585 chrUn_NT_471761v1 677 1606 GGXHOI 391 + 677 1606 0 2 309,562, 0,367, +,+, 701829 Satellite W-chromosome 585 chrUn_NT_471761v1 3426 5534 GGXHOI 380 + 3426 5534 0 2 1044,1001, 0,1107, +,+, 701832 Satellite W-chromosome 585 chrUn_NT_471763v1 1397 1974 (CAAGG)n 635 + 1397 1974 0 3 187,166,178, 0,213,399, +,+,+, 701849 Simple_repeat Simple_repeat 585 chrUn_NT_471763v1 2777 3449 (CAAGG)n 609 + 2777 3449 0 3 95,206,194, 0,272,478, +,+,+, 701855 Simple_repeat Simple_repeat 585 chrUn_NT_471763v1 3489 4352 (CAAGG)n 544 + 3489 4352 0 2 521,316, 0,547, +,+, 701858 Simple_repeat Simple_repeat 585 chrUn_NT_471763v1 4643 5070 (CAGGC)n 564 + 4643 5070 0 2 154,93, 0,334, +,+, 701861 Simple_repeat Simple_repeat 585 chrUn_NT_471763v1 5019 6155 (CAAGG)n 580 + 5019 6155 0 4 317,266,143,219, 0,495,774,917, +,+,+,+, 701863 Simple_repeat Simple_repeat 585 chrUn_NT_471764v1 3740 3971 (CTCTATGGGG)n 468 + 3740 3971 0 2 58,36, 0,195, +,+, 701874 Satellite Satellite 585 chrUn_NT_471764v1 3903 5040 (ACCCCATAGGG)n 648 - 3903 5040 0 4 272,257,203,12, 0,404,793,1125, -,-,-,-, 701876 Satellite Satellite 585 chrUn_NT_471766v1 1258 1623 (ACCCATAGGG)n 710 + 1258 1623 0 2 172,71, 0,294, +,+, 701893 Satellite Satellite 585 chrUn_NT_471766v1 2091 2517 (ACCCATAGGG)n 668 + 2091 2517 0 2 122,304, 0,122, +,+, 701897 Satellite Satellite 585 chrUn_NT_471766v1 4942 5397 (ACCCATAGGG)n 606 + 4942 5397 0 2 218,119, 0,336, +,+, 701902 Satellite Satellite 585 chrUn_NT_471767v1 1686 2109 GGXHOI 395 + 1686 2109 0 2 146,261, 0,162, +,+, 701911 Satellite W-chromosome 585 chrUn_NT_471767v1 2640 3386 GGXHOI 346 + 2640 3386 0 2 227,496, 0,250, +,+, 701913 Satellite W-chromosome 585 chrUn_NT_471767v1 6011 7227 GGXHOI 405 + 6011 7227 0 3 71,268,848, 0,83,368, +,+,+, 701916 Satellite W-chromosome 585 chrUn_NT_471768v1 2634 4332 GGXHOI 331 - 2634 4332 0 3 671,740,208, 0,725,1490, -,-,-, 701918 Satellite W-chromosome 585 chrUn_NT_471768v1 4397 5408 GGXHOI 382 - 4397 5408 0 2 283,677, 0,334, -,-, 701919 Satellite W-chromosome 585 chrUn_NT_471768v1 5566 6283 GGXHOI 408 - 5566 6283 0 2 181,511, 0,206, -,-, 701921 Satellite W-chromosome 585 chrUn_NT_471770v1 4914 5179 (ACCCATAGGG)n 386 - 4914 5179 0 2 121,125, 0,140, -,-, 701935 Satellite Satellite 585 chrUn_NT_471770v1 5334 5681 (ACCCATAGGG)n 329 - 5334 5681 0 2 192,129, 0,218, -,-, 701936 Satellite Satellite 585 chrUn_NT_471771v1 2042 2919 GGERVK10-int 853 + 2042 2919 0 2 363,514, 0,363, +,+, 701943 LTR ERVK 585 chrUn_NT_471773v1 5320 7240 GGXHOI 575 - 5320 7240 0 3 247,146,846, 0,258,1074, -,-,-, 701965 Satellite W-chromosome 585 chrUn_NT_471774v1 4860 5845 GGXHOI 403 + 4860 5845 0 2 411,551, 0,434, +,+, 701972 Satellite W-chromosome 585 chrUn_NT_471774v1 6039 7252 GGXHOI 360 + 6039 7252 0 2 126,1069, 0,144, +,+, 701973 Satellite W-chromosome 585 chrUn_NT_471777v1 2271 3208 (CACTC)n 311 + 2271 3208 0 4 183,191,177,320, 0,200,405,617, +,+,+,+, 702005 Simple_repeat Simple_repeat 585 chrUn_NT_471777v1 3512 4139 (CACTC)n 285 + 3512 4139 0 3 174,190,195, 0,192,432, +,+,+, 702007 Simple_repeat Simple_repeat 585 chrUn_NT_471777v1 4235 7261 GGLTR3F1 845 - 4235 7261 0 2 494,2532, 0,494, -,-, 702009 LTR ERVL 585 chrUn_NT_471778v1 1274 3336 GGXHOI 398 - 1274 3336 0 7 370,124,155,564,127,211,377, 0,385,528,737,1312,1461,1685, -,-,-,-,-,-,-, 702012 Satellite W-chromosome 585 chrUn_NT_471778v1 3435 4779 GGXHOI 382 - 3435 4779 0 4 130,343,280,474, 0,168,552,870, -,-,-,-, 702013 Satellite W-chromosome 585 chrUn_NT_471778v1 4903 5464 GGXHOI 431 - 4903 5464 0 3 137,192,174, 0,174,387, -,-,-, 702014 Satellite W-chromosome 585 chrUn_NT_471778v1 6034 7231 GGXHOI 434 - 6034 7231 0 3 95,790,267, 0,110,930, -,-,-, 702016 Satellite W-chromosome 585 chrUn_NT_471780v1 1621 7206 GGXHOI 459 - 1621 7206 0 5 2398,727,1374,392,621, 0,2415,3164,4555,4964, -,-,-,-,-, 702023 Satellite W-chromosome 585 chrUn_NT_471781v1 4172 4592 GGERVK10-int 285 + 4172 4592 0 2 106,125, 0,295, +,+, 702025 LTR ERVK 585 chrUn_NT_471781v1 6850 7145 GGLTR3E1 686 - 6850 7145 0 2 134,161, 0,134, -,-, 702027 LTR ERVL 585 chrUn_NT_471787v1 2575 3351 (GCCCCACAGCT)n 601 - 2575 3351 0 3 252,122,371, 0,272,405, -,-,-, 702037 Satellite Satellite 585 chrUn_NT_471787v1 3290 3817 (GCCCCACAGCT)n 504 - 3290 3817 0 3 197,85,161, 0,226,366, -,-,-, 702039 Satellite Satellite 585 chrUn_NT_471787v1 3913 4185 (GCCCCACAGCT)n 582 - 3913 4185 0 2 134,107, 0,165, -,-, 702040 Satellite Satellite 585 chrUn_NT_471787v1 4252 4661 (GCCCCACAGCT)n 711 - 4252 4661 0 3 43,123,137, 0,94,272, -,-,-, 702041 Satellite Satellite 585 chrUn_NT_471788v1 29 1571 GGXHOI 442 - 29 1571 0 2 601,658, 0,884, -,-, 702051 Satellite W-chromosome 585 chrUn_NT_471788v1 2952 4771 GGXHOI 532 - 2952 4771 0 5 27,246,151,96,208, 0,469,1007,1296,1611, -,-,-,-,-, 702056 Satellite W-chromosome 585 chrUn_NT_471788v1 4846 5342 GGXHOI 548 - 4846 5342 0 2 132,163, 0,333, -,-, 702061 Satellite W-chromosome 585 chrUn_NT_471788v1 5355 7172 GGXHOI 530 - 5355 7172 0 3 707,220,163, 0,998,1654, -,-,-, 702064 Satellite W-chromosome 585 chrUn_NT_471789v1 264 1522 (CCCTAA)n 641 + 264 1522 0 4 305,368,162,48, 0,506,874,1210, +,+,+,+, 702069 Simple_repeat Simple_repeat 585 chrUn_NT_471789v1 1815 5518 GGXHOI 400 - 1815 5518 0 3 734,1944,913, 0,792,2790, -,-,-, 702074 Satellite W-chromosome 585 chrUn_NT_471793v1 717 1117 (CTCTATGGGG)n 489 + 717 1117 0 2 128,246, 0,154, +,+, 702104 Satellite Satellite 585 chrUn_NT_471793v1 1716 2572 (CTCTATGGGG)n 513 + 1716 2572 0 4 121,122,118,369, 0,150,317,487, +,+,+,+, 702106 Satellite Satellite 585 chrUn_NT_471798v1 4081 4709 CR1-H 680 + 4081 4709 0 2 470,139, 0,489, +,+, 702156 LINE CR1 585 chrUn_NT_471801v1 683 1138 CR1-H 420 + 683 1138 0 2 204,218, 0,237, +,+, 702170 LINE CR1 585 chrUn_NT_471801v1 3069 3691 CR1-H 378 + 3069 3691 0 2 209,379, 0,243, +,+, 702172 LINE CR1 585 chrUn_NT_471802v1 2428 3023 (ACCCCATAGGG)n 334 + 2428 3023 0 4 111,45,231,121, 0,137,229,474, +,+,+,+, 702181 Satellite Satellite 585 chrUn_NT_471802v1 5099 5659 (ACCCCATAGGG)n 417 + 5099 5659 0 3 265,97,27, 0,324,533, +,+,+, 702188 Satellite Satellite 585 chrUn_NT_471803v1 106 680 (ACCCATTGGG)n 548 - 106 680 0 2 82,265, 0,309, -,-, 702191 Satellite Satellite 585 chrUn_NT_471803v1 691 1372 (ACCCATTGGG)n 574 + 691 1372 0 4 108,124,110,139, 0,142,432,542, +,+,+,+, 702193 Satellite Satellite 585 chrUn_NT_471803v1 1832 2184 (ACCCATTGGG)n 522 + 1832 2184 0 3 123,46,67, 0,128,285, +,+,+, 702198 Satellite Satellite 585 chrUn_NT_471803v1 2362 3058 (ACCCATTGGG)n 618 + 2362 3058 0 3 360,112,169, 0,391,527, +,+,+, 702203 Satellite Satellite 585 chrUn_NT_471804v1 2486 6456 GGXHOI 552 - 2486 6456 0 3 1399,28,1355, 0,2358,2615, -,-,-, 702212 Satellite W-chromosome 585 chrUn_NT_471805v1 1007 1102 (C)n 799 + 1007 1102 0 2 43,22, 0,73, +,+, 702220 Simple_repeat Simple_repeat 585 chrUn_NT_471808v1 248 1075 (CCCCATTGGG)n 470 + 248 1075 0 4 119,242,261,140, 0,130,414,687, +,+,+,+, 702250 Satellite Satellite 585 chrUn_NT_471808v1 1582 1760 (CCTCAT)n 487 + 1582 1760 0 2 34,106, 0,72, +,+, 702252 Simple_repeat Simple_repeat 585 chrUn_NT_471808v1 2044 2145 (CCT)n 720 + 2044 2145 0 2 40,29, 0,72, +,+, 702256 Simple_repeat Simple_repeat 585 chrUn_NT_471809v1 2532 3069 CR1-H 654 + 2532 3069 0 2 388,140, 0,397, +,+, 702271 LINE CR1 585 chrUn_NT_471811v1 1155 2731 GGXHOI 311 - 1155 2731 0 3 861,241,426, 0,877,1150, -,-,-, 702277 Satellite W-chromosome 585 chrUn_NT_471811v1 2815 7198 GGXHOI 319 - 2815 7198 0 5 1149,1572,636,129,764, 0,1166,2754,3432,3619, -,-,-,-,-, 702278 Satellite W-chromosome 585 chrUn_NT_471813v1 2319 6391 GGXHOI 481 - 2319 6391 0 3 2677,696,669, 0,2692,3403, -,-,-, 702284 Satellite W-chromosome 585 chrUn_NT_471813v1 6547 7204 GGXHOI 399 - 6547 7204 0 3 155,221,220, 0,196,437, -,-,-, 702285 Satellite W-chromosome 585 chrUn_NT_471816v1 187 1155 GGXHOI 565 - 187 1155 0 2 166,782, 0,186, -,-, 702299 Satellite W-chromosome 585 chrUn_NT_471816v1 3528 4543 GGXHOI 538 - 3528 4543 0 2 563,420, 0,595, -,-, 702302 Satellite W-chromosome 585 chrUn_NT_471816v1 5493 7203 GGXHOI 543 - 5493 7203 0 3 178,521,919, 0,228,791, -,-,-, 702304 Satellite W-chromosome 585 chrUn_NT_471818v1 1612 5962 GGXHOI 548 + 1612 5962 0 5 1454,261,651,638,997, 0,1495,1837,2674,3353, +,+,+,+,+, 702314 Satellite W-chromosome 585 chrUn_NT_471820v1 355 2554 GGLTR10D-int 825 + 355 2554 0 2 1830,364, 0,1835, +,+, 702327 LTR ERVK 585 chrUn_NT_471820v1 2736 5012 GGLTR7-int 584 - 2736 5012 0 2 807,337, 0,1939, -,-, 702328 LTR ERV1 585 chrUn_NT_471821v1 1161 5045 GGXHOI 324 - 1161 5045 0 6 309,125,214,199,1885,1024, 0,322,461,727,958,2860, -,-,-,-,-,-, 702334 Satellite W-chromosome 585 chrUn_NT_471821v1 5124 6235 GGXHOI 359 - 5124 6235 0 4 317,269,124,337, 0,328,638,774, -,-,-,-, 702335 Satellite W-chromosome 585 chrUn_NT_471821v1 6318 6764 GGXHOI 356 - 6318 6764 0 2 244,188, 0,258, -,-, 702336 Satellite W-chromosome 585 chrUn_NT_471822v1 5810 6660 GGXHOI 350 - 5810 6660 0 2 511,325, 0,525, -,-, 702341 Satellite W-chromosome 585 chrUn_NT_471823v1 1181 3951 GGXHOI 364 + 1181 3951 0 3 209,513,2008, 0,226,762, +,+,+, 702345 Satellite W-chromosome 585 chrUn_NT_471823v1 4326 6492 GGXHOI 390 + 4326 6492 0 3 105,1787,221, 0,140,1945, +,+,+, 702346 Satellite W-chromosome 585 chrUn_NT_471824v1 5684 7187 GGXHOI 386 - 5684 7187 0 2 716,770, 0,733, -,-, 702350 Satellite W-chromosome 585 chrUn_NT_471826v1 2255 4344 CR1-H 409 + 2255 4344 0 3 206,356,219, 0,242,1870, +,+,+, 702359 LINE CR1 585 chrUn_NT_471828v1 350 3336 GGXHOI 418 - 350 3336 0 3 935,846,1177, 0,950,1809, -,-,-, 702363 Satellite W-chromosome 585 chrUn_NT_471828v1 6434 7190 GGXHOI 274 - 6434 7190 0 2 244,496, 0,260, -,-, 702365 Satellite W-chromosome 585 chrUn_NT_471831v1 1026 1659 (CGAGG)n 545 + 1026 1659 0 3 243,181,119, 0,300,514, +,+,+, 702379 Simple_repeat Simple_repeat 585 chrUn_NT_471831v1 1659 1991 (CAAGG)n 387 + 1659 1991 0 2 121,173, 0,159, +,+, 702380 Simple_repeat Simple_repeat 585 chrUn_NT_471831v1 3211 3600 (GAGGC)n 370 + 3211 3600 0 2 40,318, 0,71, +,+, 702388 Simple_repeat Simple_repeat 585 chrUn_NT_471831v1 5723 6093 (CGAGG)n 572 + 5723 6093 0 2 175,178, 0,192, +,+, 702401 Simple_repeat Simple_repeat 585 chrUn_NT_471833v1 834 1423 GGXHOI 296 - 834 1423 0 2 293,269, 0,320, -,-, 702412 Satellite W-chromosome 585 chrUn_NT_471833v1 4170 5178 GGXHOI 309 - 4170 5178 0 2 560,385, 0,623, -,-, 702417 Satellite W-chromosome 585 chrUn_NT_471833v1 5280 6198 GGXHOI 307 - 5280 6198 0 2 263,634, 0,284, -,-, 702418 Satellite W-chromosome 585 chrUn_NT_471835v1 2668 3772 CR1-B2 687 - 2668 3772 0 2 877,224, 0,880, -,-, 702426 LINE CR1 585 chrUn_NT_471836v1 5731 6977 GGXHOI 363 - 5731 6977 0 2 290,943, 0,303, -,-, 702430 Satellite W-chromosome 585 chrUn_NT_471838v1 266 881 (CAAGG)n 581 + 266 881 0 2 186,394, 0,221, +,+, 702439 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 903 1968 (CAAGG)n 565 + 903 1968 0 4 345,263,207,198, 0,397,660,867, +,+,+,+, 702441 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 2040 2665 (CAAGG)n 645 + 2040 2665 0 3 181,206,180, 0,201,445, +,+,+, 702443 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 2867 3391 (CAAGG)n 626 + 2867 3391 0 2 141,148, 0,376, +,+, 702445 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 4161 4551 (CAAGG)n 538 + 4161 4551 0 2 161,46, 0,344, +,+, 702452 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 5071 5614 (CAAGG)n 658 + 5071 5614 0 2 112,160, 0,383, +,+, 702456 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 5666 6308 (CAAGG)n 640 + 5666 6308 0 2 208,395, 0,247, +,+, 702460 Simple_repeat Simple_repeat 585 chrUn_NT_471838v1 6599 7165 (CAAGG)n 661 + 6599 7165 0 3 235,140,13, 0,235,553, +,+,+, 702465 Simple_repeat Simple_repeat 585 chrUn_NT_471839v1 1358 2198 GGXHOI 348 - 1358 2198 0 2 634,189, 0,651, -,-, 702471 Satellite W-chromosome 585 chrUn_NT_471839v1 3018 4077 GGXHOI 365 - 3018 4077 0 2 624,372, 0,687, -,-, 702475 Satellite W-chromosome 585 chrUn_NT_471839v1 4949 7138 GGXHOI 397 - 4949 7138 0 2 919,1255, 0,934, -,-, 702479 Satellite W-chromosome 585 chrUn_NT_471841v1 4940 5266 GGCAN 876 - 4940 5266 0 2 83,212, 0,114, -,-, 702490 Unknown Unknown 585 chrUn_NT_471842v1 1208 2364 GGXHOI 418 - 1208 2364 0 4 403,98,184,414, 0,423,539,742, -,-,-,-, 702496 Satellite W-chromosome 585 chrUn_NT_471842v1 3732 4335 GGXHOI 389 - 3732 4335 0 3 138,92,328, 0,159,275, -,-,-, 702499 Satellite W-chromosome 585 chrUn_NT_471842v1 4653 5599 GGXHOI 397 - 4653 5599 0 2 138,794, 0,152, -,-, 702501 Satellite W-chromosome 585 chrUn_NT_471842v1 6846 7165 GGXHOI 456 - 6846 7165 0 2 101,195, 0,124, -,-, 702504 Satellite W-chromosome 585 chrUn_NT_471843v1 4436 7175 GGXHOI 485 - 4436 7175 0 3 1676,363,631, 0,1694,2108, -,-,-, 702507 Satellite W-chromosome 585 chrUn_NT_471845v1 2449 3719 CR1-H 588 + 2449 3719 0 2 1158,112, 0,1158, +,+, 702512 LINE CR1 585 chrUn_NT_471845v1 6462 7084 CR1-H 666 + 6462 7084 0 2 477,139, 0,483, +,+, 702516 LINE CR1 585 chrUn_NT_471846v1 4834 5217 (ACCCCATAGGG)n 378 - 4834 5217 0 2 126,237, 0,146, -,-, 702522 Satellite Satellite 585 chrUn_NT_471846v1 5054 5290 (CTCTATGGGG)n 568 + 5054 5290 0 2 73,44, 0,192, +,+, 702523 Satellite Satellite 585 chrUn_NT_471848v1 620 3136 GGXHOI 408 - 620 3136 0 4 436,1640,146,251, 0,450,2104,2265, -,-,-,-, 702528 Satellite W-chromosome 585 chrUn_NT_471848v1 3218 5789 GGXHOI 400 - 3218 5789 0 3 1922,288,335, 0,1934,2236, -,-,-, 702529 Satellite W-chromosome 585 chrUn_NT_471848v1 5873 7164 GGXHOI 381 - 5873 7164 0 3 230,270,723, 0,278,568, -,-,-, 702530 Satellite W-chromosome 585 chrUn_NT_471849v1 3539 7168 GGXHOI 427 - 3539 7168 0 8 287,497,252,389,182,268,1264,269, 0,328,838,1135,1570,1769,2080,3360, -,-,-,-,-,-,-,-, 702532 Satellite W-chromosome 585 chrUn_NT_471850v1 1693 3773 GGXHOI 346 + 1693 3773 0 3 1199,419,428, 0,1217,1652, +,+,+, 702534 Satellite W-chromosome 585 chrUn_NT_471850v1 4214 4745 GGXHOI 332 + 4214 4745 0 2 172,340, 0,191, +,+, 702536 Satellite W-chromosome 585 chrUn_NT_471851v1 3136 3228 A-rich 400 + 3136 3228 0 2 22,11, 0,81, +,+, 702547 Low_complexity Low_complexity 585 chrUn_NT_471853v1 5154 7162 GGLTR7A 791 - 5154 7162 0 4 115,253,1459,132, 0,116,370,1876, -,-,-,-, 702583 LTR ERV1 585 chrUn_NT_471854v1 737 6593 GGXHOI 344 + 737 6593 0 8 224,1166,1710,319,1516,463,156,98, 0,241,1465,3191,3568,5100,5578,5758, +,+,+,+,+,+,+,+, 702585 Satellite W-chromosome 585 chrUn_NT_471855v1 6742 6859 (CCCCATGT)n 810 + 6742 6859 0 2 45,45, 0,72, +,+, 702590 Simple_repeat Simple_repeat 585 chrUn_NT_471856v1 4625 7136 GGXHOI 427 + 4625 7136 0 2 812,1683, 0,828, +,+, 702592 Satellite W-chromosome 585 chrUn_NT_471857v1 1884 6994 GGXHOI 425 - 1884 6994 0 5 460,1425,1979,190,958, 0,475,1949,3944,4152, -,-,-,-,-, 702594 Satellite W-chromosome 585 chrUn_NT_471858v1 230 2310 GGXHOI 411 + 230 2310 0 3 643,228,1172, 0,660,908, +,+,+, 702596 Satellite W-chromosome 585 chrUn_NT_471858v1 2499 7151 GGXHOI 417 + 2499 7151 0 4 292,2036,1791,448, 0,310,2398,4204, +,+,+,+, 702597 Satellite W-chromosome 585 chrUn_NT_471859v1 5972 7136 GGLTR7-int 284 - 5972 7136 0 2 276,198, 0,966, -,-, 702606 LTR ERV1 585 chrUn_NT_471861v1 3566 6374 GGERVL-B-int 674 - 3566 6374 0 2 962,1780, 0,1028, -,-, 702633 LTR ERVL 585 chrUn_NT_471863v1 1508 3149 GGXHOI 430 - 1508 3149 0 6 145,352,314,145,213,287, 0,164,532,895,1089,1354, -,-,-,-,-,-, 702661 Satellite W-chromosome 585 chrUn_NT_471863v1 3274 4660 GGXHOI 409 - 3274 4660 0 2 930,425, 0,961, -,-, 702662 Satellite W-chromosome 585 chrUn_NT_471863v1 4727 7050 GGXHOI 375 - 4727 7050 0 4 1255,140,296,541, 0,1287,1474,1782, -,-,-,-, 702663 Satellite W-chromosome 585 chrUn_NT_471865v1 1383 2845 GGXHOI 371 + 1383 2845 0 4 441,115,419,424, 0,459,599,1038, +,+,+,+, 702669 Satellite W-chromosome 585 chrUn_NT_471865v1 2916 6233 GGXHOI 355 + 2916 6233 0 3 124,1457,1651, 0,166,1666, +,+,+, 702670 Satellite W-chromosome 585 chrUn_NT_471866v1 2663 3123 (ACCCATAGGG)n 733 + 2663 3123 0 2 124,323, 0,137, +,+, 702678 Satellite Satellite 585 chrUn_NT_471866v1 2927 4482 (ACCCCATAGGG)n 671 + 2927 4482 0 5 215,240,310,425,32, 0,251,609,972,1523, +,+,+,+,+, 702679 Satellite Satellite 585 chrUn_NT_471866v1 4494 4763 (ACCCATAGGG)n 655 + 4494 4763 0 2 124,101, 0,168, +,+, 702682 Satellite Satellite 585 chrUn_NT_471866v1 6024 6832 (ACCCCATAGGG)n 690 + 6024 6832 0 2 480,275, 0,533, +,+, 702684 Satellite Satellite 585 chrUn_NT_471867v1 4178 4567 (CTCTATGGGG)n 455 + 4178 4567 0 2 229,119, 0,270, +,+, 702692 Satellite Satellite 585 chrUn_NT_471867v1 4638 5191 (CTCTATGGGG)n 457 + 4638 5191 0 3 131,121,239, 0,150,314, +,+,+, 702693 Satellite Satellite 585 chrUn_NT_471868v1 1335 1716 (AGTGG)n 166 + 1335 1716 0 2 238,79, 0,302, +,+, 702702 Simple_repeat Simple_repeat 585 chrUn_NT_471874v1 1435 5324 CR1-F 822 + 1435 5324 0 2 370,2606, 0,1283, +,+, 702771 LINE CR1 585 chrUn_NT_471874v1 5278 6916 GGLTR3B4 652 + 5278 6916 0 2 192,106, 0,1532, +,+, 702773 LTR ERVL 585 chrUn_NT_471874v1 5470 6810 GGLTR10C2 887 + 5470 6810 0 3 364,817,159, 0,364,1181, +,+,+, 702774 LTR ERVK 585 chrUn_NT_471875v1 6026 6333 (ACCCATAGAG)n 642 + 6026 6333 0 2 163,21, 0,286, +,+, 702781 Satellite Satellite 585 chrUn_NT_471875v1 6336 6698 (CTCTATGGGG)n 627 - 6336 6698 0 3 82,20,123, 0,207,239, -,-,-, 702783 Satellite Satellite 585 chrUn_NT_471876v1 2064 2323 (CTCTATGGGG)n 439 - 2064 2323 0 2 109,107, 0,152, -,-, 702787 Satellite Satellite 585 chrUn_NT_471877v1 2175 3010 (ACCCCATAGGG)n 513 - 2175 3010 0 3 287,216,280, 0,339,555, -,-,-, 702794 Satellite Satellite 585 chrUn_NT_471877v1 3015 4145 (ACCCCATAGGG)n 477 - 3015 4145 0 4 370,23,191,304, 0,490,635,826, -,-,-,-, 702796 Satellite Satellite 585 chrUn_NT_471877v1 4156 4518 (ACCCCATAGGG)n 546 - 4156 4518 0 3 86,33,125, 0,193,237, -,-,-, 702800 Satellite Satellite 585 chrUn_NT_471877v1 4529 5288 (ACCCCATAGGG)n 527 - 4529 5288 0 4 90,64,134,280, 0,217,293,479, -,-,-,-, 702803 Satellite Satellite 585 chrUn_NT_471877v1 5540 5846 (CTCTATGGGG)n 434 + 5540 5846 0 2 117,43, 0,263, +,+, 702807 Satellite Satellite 585 chrUn_NT_471877v1 5881 6286 (ACCCCATAGGG)n 499 - 5881 6286 0 2 135,259, 0,146, -,-, 702809 Satellite Satellite 585 chrUn_NT_471877v1 6485 7012 (ACCCCATAGGG)n 464 - 6485 7012 0 3 185,132,133, 0,199,394, -,-,-, 702811 Satellite Satellite 585 chrUn_NT_471878v1 1083 1998 GGXHOI 379 + 1083 1998 0 2 463,395, 0,520, +,+, 702814 Satellite W-chromosome 585 chrUn_NT_471878v1 4605 7132 GGXHOI 367 + 4605 7132 0 3 472,1083,846, 0,535,1681, +,+,+, 702820 Satellite W-chromosome 585 chrUn_NT_471881v1 5213 7127 GGXHOI 362 + 5213 7127 0 3 1092,139,644, 0,1114,1270, +,+,+, 702833 Satellite W-chromosome 585 chrUn_NT_471882v1 2807 3076 (CTCTATGGGG)n 402 - 2807 3076 0 2 124,125, 0,144, -,-, 702845 Satellite Satellite 585 chrUn_NT_471885v1 6718 6980 (ACCCATAGGG)n 604 + 6718 6980 0 2 103,40, 0,222, +,+, 702886 Satellite Satellite 585 chrUn_NT_471887v1 2698 4497 GGXHOI 365 + 2698 4497 0 2 934,808, 0,991, +,+, 702892 Satellite W-chromosome 585 chrUn_NT_471887v1 4576 5068 GGXHOI 314 + 4576 5068 0 2 368,100, 0,392, +,+, 702893 Satellite W-chromosome 585 chrUn_NT_471887v1 6122 7123 GGXHOI 354 + 6122 7123 0 2 182,805, 0,196, +,+, 702895 Satellite W-chromosome 585 chrUn_NT_471888v1 1272 1747 (CCTTG)n 517 + 1272 1747 0 2 230,185, 0,290, +,+, 702900 Simple_repeat Simple_repeat 585 chrUn_NT_471888v1 2867 3616 (CCTTG)n 522 + 2867 3616 0 3 129,26,219, 0,300,530, +,+,+, 702905 Simple_repeat Simple_repeat 585 chrUn_NT_471888v1 4979 5481 (CCTTG)n 543 + 4979 5481 0 2 259,236, 0,266, +,+, 702914 Simple_repeat Simple_repeat 585 chrUn_NT_471888v1 5880 6491 (CAAGG)n 568 + 5880 6491 0 2 385,212, 0,399, +,+, 702917 Simple_repeat Simple_repeat 585 chrUn_NT_471889v1 1575 2012 (CTCTATGGGG)n 441 + 1575 2012 0 3 119,119,110, 0,158,327, +,+,+, 702924 Satellite Satellite 585 chrUn_NT_471889v1 5105 5811 (GGATG)n 701 + 5105 5811 0 2 495,198, 0,508, +,+, 702929 Simple_repeat Simple_repeat 585 chrUn_NT_471889v1 5988 6391 (GGATG)n 661 + 5988 6391 0 2 192,189, 0,214, +,+, 702931 Simple_repeat Simple_repeat 585 chrUn_NT_471890v1 736 7122 GGXHOI 536 - 736 7122 0 5 22,264,620,163,626, 0,1564,3632,4953,5760, -,-,-,-,-, 702934 Satellite W-chromosome 585 chrUn_NT_471891v1 3167 3770 CR1-H 635 + 3167 3770 0 2 457,140, 0,463, +,+, 702944 LINE CR1 585 chrUn_NT_471892v1 1631 2628 GGXHOI 387 + 1631 2628 0 2 267,673, 0,324, +,+, 702952 Satellite W-chromosome 585 chrUn_NT_471892v1 2731 4489 GGXHOI 345 + 2731 4489 0 3 303,1111,268, 0,365,1490, +,+,+, 702953 Satellite W-chromosome 585 chrUn_NT_471895v1 5297 6660 GGXHOI 363 - 5297 6660 0 2 514,787, 0,576, -,-, 702984 Satellite W-chromosome 585 chrUn_NT_471897v1 612 1333 (CTCTATGGGG)n 475 - 612 1333 0 2 62,76, 0,645, -,-, 702999 Satellite Satellite 585 chrUn_NT_471897v1 724 848 (CTCTATGGGG)n 428 - 724 848 0 2 48,19, 0,105, -,-, 703001 Satellite Satellite 585 chrUn_NT_471897v1 896 1142 (GCCCCACAGCT)n 446 + 896 1142 0 3 13,55,67, 0,70,179, +,+,+, 703003 Satellite Satellite 585 chrUn_NT_471898v1 1236 2394 GGXHOI 341 + 1236 2394 0 5 137,207,214,128,306, 0,170,439,708,852, +,+,+,+,+, 703021 Satellite W-chromosome 585 chrUn_NT_471898v1 2548 3208 GGXHOI 385 + 2548 3208 0 3 61,332,207, 0,106,453, +,+,+, 703022 Satellite W-chromosome 585 chrUn_NT_471898v1 3281 6605 GGXHOI 367 + 3281 6605 0 6 1649,646,119,169,119,465, 0,1697,2361,2528,2718,2859, +,+,+,+,+,+, 703023 Satellite W-chromosome 585 chrUn_NT_471900v1 493 1481 GGXHOI 347 + 493 1481 0 2 780,184, 0,804, +,+, 703027 Satellite W-chromosome 585 chrUn_NT_471901v1 1933 4726 GGXHOI 340 - 1933 4726 0 2 1294,1445, 0,1348, -,-, 703030 Satellite W-chromosome 585 chrUn_NT_471901v1 4871 7059 GGXHOI 343 - 4871 7059 0 5 137,123,713,948,151, 0,157,335,1065,2037, -,-,-,-,-, 703031 Satellite W-chromosome 585 chrUn_NT_471904v1 2539 2852 (GCCTG)n 368 + 2539 2852 0 2 90,41, 0,272, +,+, 703069 Simple_repeat Simple_repeat 585 chrUn_NT_471904v1 3517 4165 (CAAGG)n 523 + 3517 4165 0 2 373,249, 0,399, +,+, 703076 Simple_repeat Simple_repeat 585 chrUn_NT_471904v1 4589 5060 (CCTTG)n 534 + 4589 5060 0 2 135,54, 0,417, +,+, 703079 Simple_repeat Simple_repeat 585 chrUn_NT_471905v1 438 1007 (CCTTG)n 584 + 438 1007 0 2 179,374, 0,195, +,+, 703087 Simple_repeat Simple_repeat 585 chrUn_NT_471905v1 1084 2938 (CCTTG)n 638 + 1084 2938 0 6 177,283,161,69,116,142, 0,210,505,1268,1337,1712, +,+,+,+,+,+, 703088 Simple_repeat Simple_repeat 585 chrUn_NT_471905v1 3443 5393 (CCTTG)n 652 + 3443 5393 0 6 525,189,188,105,160,24, 0,544,733,1418,1559,1926, +,+,+,+,+,+, 703095 Simple_repeat Simple_repeat 585 chrUn_NT_471905v1 6560 7096 (CCTTG)n 592 + 6560 7096 0 2 203,155, 0,381, +,+, 703103 Simple_repeat Simple_repeat 585 chrUn_NT_471906v1 1835 7099 GGXHOI 398 - 1835 7099 0 5 705,706,866,2754,122, 0,720,1442,2356,5142, -,-,-,-,-, 703106 Satellite W-chromosome 585 chrUn_NT_471908v1 2363 2984 CR1-H 307 + 2363 2984 0 2 211,375, 0,246, +,+, 703116 LINE CR1 585 chrUn_NT_471908v1 4858 5397 CR1-H 358 + 4858 5397 0 2 203,301, 0,238, +,+, 703119 LINE CR1 585 chrUn_NT_471909v1 3101 4600 (CTGTG)n 445 + 3101 4600 0 5 359,230,218,399,214, 0,373,625,865,1285, +,+,+,+,+, 703125 Simple_repeat Simple_repeat 585 chrUn_NT_471911v1 1037 1252 (CTCTATGGGG)n 416 + 1037 1252 0 2 91,111, 0,104, +,+, 703148 Satellite Satellite 585 chrUn_NT_471911v1 1324 1609 (CTCTATGGGG)n 339 + 1324 1609 0 2 110,127, 0,158, +,+, 703149 Satellite Satellite 585 chrUn_NT_471911v1 2716 3472 (CTCTATGGGG)n 340 + 2716 3472 0 3 449,122,114, 0,486,642, +,+,+, 703151 Satellite Satellite 585 chrUn_NT_471911v1 4854 5146 (CTCTATGGGG)n 310 + 4854 5146 0 2 112,127, 0,165, +,+, 703156 Satellite Satellite 585 chrUn_NT_471911v1 6171 6746 (CTCTATGGGG)n 351 + 6171 6746 0 4 130,125,97,36, 0,166,331,539, +,+,+,+, 703159 Satellite Satellite 585 chrUn_NT_471912v1 365 669 (CTCTATGGGG)n 224 - 365 669 0 2 104,182, 0,122, -,-, 703163 Satellite Satellite 585 chrUn_NT_471912v1 784 1307 (CTCTATGGGG)n 253 - 784 1307 0 3 93,211,118, 0,139,405, -,-,-, 703164 Satellite Satellite 585 chrUn_NT_471912v1 1402 1977 (CTCTATGGGG)n 304 - 1402 1977 0 2 93,451, 0,124, -,-, 703165 Satellite Satellite 585 chrUn_NT_471912v1 3039 3317 (CTCTATGGGG)n 255 - 3039 3317 0 2 109,107, 0,171, -,-, 703167 Satellite Satellite 585 chrUn_NT_471914v1 3324 3735 GGXHOI 282 - 3324 3735 0 2 262,132, 0,279, -,-, 703200 Satellite W-chromosome 585 chrUn_NT_471914v1 3857 5426 GGXHOI 347 - 3857 5426 0 8 208,136,124,257,125,125,271,108, 0,224,381,517,810,988,1153,1461, -,-,-,-,-,-,-,-, 703201 Satellite W-chromosome 585 chrUn_NT_471914v1 5499 7090 GGXHOI 310 - 5499 7090 0 3 241,124,1175, 0,253,416, -,-,-, 703202 Satellite W-chromosome 585 chrUn_NT_471916v1 3955 4610 GGLTR11-int 493 + 3955 4610 0 2 124,221, 0,434, +,+, 703235 LTR ERV1 585 chrUn_NT_471917v1 4780 4974 (GGTATGG)n 381 + 4780 4974 0 2 74,82, 0,112, +,+, 703243 Simple_repeat Simple_repeat 585 chrUn_NT_471918v1 1251 1340 G-rich 454 + 1251 1340 0 2 48,13, 0,76, +,+, 703246 Low_complexity Low_complexity 585 chrUn_NT_471918v1 3917 4616 CR1-B2 728 - 3917 4616 0 2 471,225, 0,474, -,-, 703253 LINE CR1 585 chrUn_NT_471919v1 2838 3461 CR1-H 678 - 2838 3461 0 2 139,478, 0,145, -,-, 703258 LINE CR1 585 chrUn_NT_471921v1 6046 6296 (ACCCATAGAG)n 634 - 6046 6296 0 2 118,132, 0,118, -,-, 703282 Satellite Satellite 585 chrUn_NT_471921v1 6262 6464 (ACCCATAGGG)n 394 - 6262 6464 0 2 65,25, 0,177, -,-, 703283 Satellite Satellite 585 chrUn_NT_471925v1 143 4540 CR1-F 504 + 143 4540 0 13 202,199,200,171,152,191,198,201,201,203,156,200,176, 0,244,484,724,939,1375,1849,2345,2588,2831,3298,3743,4221, +,+,+,+,+,+,+,+,+,+,+,+,+, 703292 LINE CR1 585 chrUn_NT_471925v1 4807 7082 CR1-F 511 + 4807 7082 0 7 188,197,201,202,200,155,161, 0,230,721,964,1207,1670,2114, +,+,+,+,+,+,+, 703300 LINE CR1 585 chrUn_NT_471926v1 4380 5531 GGXHOI 370 - 4380 5531 0 4 479,363,174,64, 0,525,900,1087, -,-,-,-, 703305 Satellite W-chromosome 585 chrUn_NT_471929v1 3185 5615 GGLTR7-int 566 + 3185 5615 0 2 331,769, 0,1661, +,+, 703317 LTR ERV1 585 chrUn_NT_471929v1 5803 7081 GGLTR10D-int 881 - 5803 7081 0 2 361,914, 0,364, -,-, 703321 LTR ERVK 585 chrUn_NT_471931v1 1971 4754 GGXHOI 394 + 1971 4754 0 6 122,178,197,1169,354,579, 0,178,376,617,1837,2204, +,+,+,+,+,+, 703327 Satellite W-chromosome 585 chrUn_NT_471931v1 4852 5574 GGXHOI 367 + 4852 5574 0 3 309,166,213, 0,324,509, +,+,+, 703328 Satellite W-chromosome 585 chrUn_NT_471932v1 1337 1695 (CCTTG)n 528 + 1337 1695 0 2 99,79, 0,279, +,+, 703337 Simple_repeat Simple_repeat 585 chrUn_NT_471932v1 5071 7074 GGERVL-B-int 534 + 5071 7074 0 2 1894,46, 0,1957, +,+, 703354 LTR ERVL 585 chrUn_NT_471933v1 624 1113 (CGAGG)n 470 + 624 1113 0 2 293,20, 0,469, +,+, 703357 Simple_repeat Simple_repeat 585 chrUn_NT_471933v1 1618 2142 (CGAGG)n 555 + 1618 2142 0 2 327,177, 0,347, +,+, 703362 Simple_repeat Simple_repeat 585 chrUn_NT_471933v1 2447 3644 (CGAGG)n 536 + 2447 3644 0 2 145,876, 0,321, +,+, 703363 Simple_repeat Simple_repeat 585 chrUn_NT_471933v1 3691 5443 (CGAGG)n 556 + 3691 5443 0 6 222,181,178,672,178,202, 0,237,457,658,1346,1550, +,+,+,+,+,+, 703366 Simple_repeat Simple_repeat 585 chrUn_NT_471933v1 5580 6211 (CGAGG)n 535 + 5580 6211 0 2 174,457, 0,174, +,+, 703368 Simple_repeat Simple_repeat 585 chrUn_NT_471933v1 6288 7054 (CGAGG)n 517 + 6288 7054 0 2 179,551, 0,215, +,+, 703369 Simple_repeat Simple_repeat 585 chrUn_NT_471934v1 1203 3426 GGXHOI 379 - 1203 3426 0 2 1190,1014, 0,1209, -,-, 703371 Satellite W-chromosome 585 chrUn_NT_471934v1 3523 5418 GGXHOI 389 - 3523 5418 0 3 846,780,231, 0,862,1664, -,-,-, 703372 Satellite W-chromosome 585 chrUn_NT_471934v1 5505 7071 GGXHOI 325 - 5505 7071 0 3 158,1133,196, 0,180,1370, -,-,-, 703373 Satellite W-chromosome 585 chrUn_NT_471936v1 5830 6186 (ACCCATTGGG)n 350 + 5830 6186 0 2 199,24, 0,332, +,+, 703383 Satellite Satellite 585 chrUn_NT_471938v1 1335 1603 (ACCCATTGGG)n 446 - 1335 1603 0 2 109,104, 0,164, -,-, 703392 Satellite Satellite 585 chrUn_NT_471938v1 1818 2043 (CCCCATTGGG)n 489 - 1818 2043 0 2 105,107, 0,118, -,-, 703394 Satellite Satellite 585 chrUn_NT_471942v1 628 1091 (GCCCCACAGCT)n 310 - 628 1091 0 3 158,141,128, 0,177,335, -,-,-, 703426 Satellite Satellite 585 chrUn_NT_471942v1 6652 6919 (ACCCCATAGGG)n 362 - 6652 6919 0 2 60,131, 0,136, -,-, 703437 Satellite Satellite 585 chrUn_NT_471943v1 807 2400 GGXHOI 301 + 807 2400 0 3 713,603,211, 0,740,1382, +,+,+, 703441 Satellite W-chromosome 585 chrUn_NT_471943v1 2518 4067 GGXHOI 326 + 2518 4067 0 2 1176,349, 0,1200, +,+, 703442 Satellite W-chromosome 585 chrUn_NT_471943v1 4689 5958 GGXHOI 290 + 4689 5958 0 2 170,1082, 0,187, +,+, 703444 Satellite W-chromosome 585 chrUn_NT_471944v1 3920 7060 Z-REP 746 + 3920 7060 0 3 146,1104,1114, 0,895,2026, +,+,+, 703450 Satellite macro 585 chrUn_NT_471947v1 3073 5338 GGXHOI 443 - 3073 5338 0 2 2102,149, 0,2116, -,-, 703461 Satellite W-chromosome 585 chrUn_NT_471947v1 6265 7049 GGXHOI 456 - 6265 7049 0 2 147,618, 0,166, -,-, 703463 Satellite W-chromosome 585 chrUn_NT_471948v1 300 665 (CAAGG)n 392 + 300 665 0 2 104,75, 0,290, +,+, 703465 Simple_repeat Simple_repeat 585 chrUn_NT_471948v1 608 1989 (CGAGG)n 510 + 608 1989 0 5 187,352,190,366,185, 0,217,596,817,1196, +,+,+,+,+, 703467 Simple_repeat Simple_repeat 585 chrUn_NT_471948v1 2075 2666 (CGAGG)n 576 + 2075 2666 0 2 182,385, 0,206, +,+, 703469 Simple_repeat Simple_repeat 585 chrUn_NT_471948v1 2696 3135 (CGAGG)n 514 + 2696 3135 0 2 179,243, 0,196, +,+, 703471 Simple_repeat Simple_repeat 585 chrUn_NT_471948v1 3641 3930 (CCTCG)n 580 + 3641 3930 0 2 94,18, 0,271, +,+, 703476 Simple_repeat Simple_repeat 585 chrUn_NT_471948v1 4433 5560 (CCTCG)n 494 + 4433 5560 0 3 103,187,647, 0,278,480, +,+,+, 703479 Simple_repeat Simple_repeat 585 chrUn_NT_471948v1 5713 6268 (CCTCG)n 432 + 5713 6268 0 2 183,338, 0,217, +,+, 703482 Simple_repeat Simple_repeat 585 chrUn_NT_471949v1 1994 5632 GGERV28_I-int 151 - 1994 5632 0 3 1992,365,675, 0,2305,2963, -,-,-, 703487 LTR ERVK 585 chrUn_NT_471950v1 2201 3229 GGXHOI 275 - 2201 3229 0 5 221,161,160,137,253, 0,239,446,621,775, -,-,-,-,-, 703490 Satellite W-chromosome 585 chrUn_NT_471950v1 3358 3688 GGXHOI 248 - 3358 3688 0 2 150,134, 0,196, -,-, 703491 Satellite W-chromosome 585 chrUn_NT_471950v1 3759 6066 GGXHOI 370 - 3759 6066 0 5 207,250,292,497,969, 0,221,483,826,1338, -,-,-,-,-, 703492 Satellite W-chromosome 585 chrUn_NT_471950v1 6132 6970 GGXHOI 424 - 6132 6970 0 2 479,342, 0,496, -,-, 703493 Satellite W-chromosome 585 chrUn_NT_471953v1 2340 6786 GGXHOI 359 + 2340 6786 0 5 1879,1140,1026,170,129, 0,1894,3051,4096,4317, +,+,+,+,+, 703501 Satellite W-chromosome 585 chrUn_NT_471954v1 1222 2801 GGXHOI 407 - 1222 2801 0 5 507,163,128,370,300, 0,545,734,896,1279, -,-,-,-,-, 703504 Satellite W-chromosome 585 chrUn_NT_471954v1 3579 4707 GGXHOI 408 - 3579 4707 0 2 380,732, 0,396, -,-, 703506 Satellite W-chromosome 585 chrUn_NT_471954v1 4884 6917 GGXHOI 437 - 4884 6917 0 3 1204,292,474, 0,1230,1559, -,-,-, 703507 Satellite W-chromosome 585 chrUn_NT_471956v1 1088 5918 GGXHOI 390 + 1088 5918 0 11 207,442,349,351,315,434,393,688,393,650,296, 0,255,717,1083,1491,1825,2279,2691,3398,3843,4534, +,+,+,+,+,+,+,+,+,+,+, 703524 Satellite W-chromosome 585 chrUn_NT_471956v1 6192 7016 GGXHOI 397 + 6192 7016 0 2 413,397, 0,427, +,+, 703525 Satellite W-chromosome 585 chrUn_NT_471958v1 561 1016 (ACCCATTGGG)n 394 + 561 1016 0 2 137,290, 0,165, +,+, 703533 Satellite Satellite 585 chrUn_NT_471958v1 4069 4330 (CTCTATGGGG)n 585 + 4069 4330 0 2 110,110, 0,151, +,+, 703537 Satellite Satellite 585 chrUn_NT_471958v1 4570 4964 (CTCTATGGGG)n 544 + 4570 4964 0 2 229,103, 0,291, +,+, 703538 Satellite Satellite 585 chrUn_NT_471959v1 1643 2978 GGXHOI 432 - 1643 2978 0 4 50,635,142,408, 0,74,766,927, -,-,-,-, 703542 Satellite W-chromosome 585 chrUn_NT_471959v1 3063 7038 GGXHOI 387 - 3063 7038 0 2 2218,1742, 0,2233, -,-, 703543 Satellite W-chromosome 585 chrUn_NT_471962v1 6316 6562 CR1-X 445 - 6316 6562 0 2 85,158, 0,88, -,-, 703576 LINE CR1 585 chrUn_NT_471963v1 1729 2548 GGXHOI 386 - 1729 2548 0 2 362,400, 0,419, -,-, 703580 Satellite W-chromosome 585 chrUn_NT_471963v1 4558 6858 GGXHOI 362 - 4558 6858 0 4 481,375,820,517, 0,501,906,1783, -,-,-,-, 703585 Satellite W-chromosome 585 chrUn_NT_471964v1 6367 7045 GGXHOI 384 - 6367 7045 0 2 343,278, 0,400, -,-, 703587 Satellite W-chromosome 585 chrUn_NT_471965v1 6098 7002 (ACCCATAGAG)n 689 - 6098 7002 0 4 192,20,141,238, 0,466,525,666, -,-,-,-, 703591 Satellite Satellite 585 chrUn_NT_471968v1 1257 4844 GGXHOI 407 + 1257 4844 0 6 130,762,903,931,509,250, 0,149,924,1845,2804,3337, +,+,+,+,+,+, 703604 Satellite W-chromosome 585 chrUn_NT_471968v1 5907 6999 GGXHOI 391 + 5907 6999 0 2 366,664, 0,428, +,+, 703606 Satellite W-chromosome 585 chrUn_NT_471969v1 1410 1833 CR1-Y 644 + 1410 1833 0 2 289,134, 0,289, +,+, 703609 LINE CR1 585 chrUn_NT_471970v1 1072 1948 GGXHOI 221 - 1072 1948 0 2 711,146, 0,730, -,-, 703616 Satellite W-chromosome 585 chrUn_NT_471970v1 2061 7028 GGXHOI 362 - 2061 7028 0 8 1460,161,444,555,139,575,492,920, 0,1474,1647,2115,2720,2916,3503,4047, -,-,-,-,-,-,-,-, 703617 Satellite W-chromosome 585 chrUn_NT_471974v1 960 1391 (ACCCATAGAG)n 682 - 960 1391 0 2 119,312, 0,119, -,-, 703669 Satellite Satellite 585 chrUn_NT_471977v1 1924 2608 (CCTCG)n 576 + 1924 2608 0 2 478,25, 0,659, +,+, 703689 Simple_repeat Simple_repeat 585 chrUn_NT_471977v1 2647 4841 GGLTR10D-int 889 + 2647 4841 0 2 1826,365, 0,1829, +,+, 703692 LTR ERVK 585 chrUn_NT_471978v1 1771 3042 GGXHOI 390 + 1771 3042 0 2 354,900, 0,371, +,+, 703696 Satellite W-chromosome 585 chrUn_NT_471978v1 3151 3831 GGXHOI 295 + 3151 3831 0 2 323,318, 0,362, +,+, 703697 Satellite W-chromosome 585 chrUn_NT_471978v1 4108 4717 GGXHOI 352 + 4108 4717 0 3 178,203,180, 0,203,429, +,+,+, 703698 Satellite W-chromosome 585 chrUn_NT_471978v1 5586 6866 GGXHOI 369 + 5586 6866 0 2 915,349, 0,931, +,+, 703701 Satellite W-chromosome 585 chrUn_NT_471979v1 547 4272 GGXHOI 400 - 547 4272 0 5 110,1036,637,436,1415, 0,150,1203,1856,2310, -,-,-,-,-, 703703 Satellite W-chromosome 585 chrUn_NT_471982v1 610 4268 GGXHOI 397 + 610 4268 0 3 1427,657,1514, 0,1444,2144, +,+,+, 703722 Satellite W-chromosome 585 chrUn_NT_471982v1 4341 5139 GGXHOI 238 + 4341 5139 0 2 148,608, 0,190, +,+, 703723 Satellite W-chromosome 585 chrUn_NT_471983v1 4533 5456 CR1-B2 665 - 4533 5456 0 2 701,219, 0,704, -,-, 703728 LINE CR1 585 chrUn_NT_471984v1 1451 1962 (GCCCCACAGCT)n 397 + 1451 1962 0 3 139,191,121, 0,188,390, +,+,+, 703734 Satellite Satellite 585 chrUn_NT_471984v1 5270 5581 (CTCTATGGGG)n 460 + 5270 5581 0 2 124,124, 0,187, +,+, 703745 Satellite Satellite 585 chrUn_NT_471986v1 2178 3212 GGXHOI 474 - 2178 3212 0 2 227,582, 0,452, -,-, 703753 Satellite W-chromosome 585 chrUn_NT_471986v1 3329 7021 GGXHOI 558 - 3329 7021 0 3 521,2418,77, 0,891,3615, -,-,-, 703755 Satellite W-chromosome 585 chrUn_NT_471987v1 977 7026 GGXHOI 410 + 977 7026 0 4 383,2357,2603,615, 0,446,2816,5434, +,+,+,+, 703759 Satellite W-chromosome 585 chrUn_NT_471988v1 839 1413 (CGAGG)n 574 + 839 1413 0 2 368,182, 0,392, +,+, 703761 Simple_repeat Simple_repeat 585 chrUn_NT_471988v1 1766 3288 (CGAGG)n 466 + 1766 3288 0 2 1275,57, 0,1465, +,+, 703764 Simple_repeat Simple_repeat 585 chrUn_NT_471988v1 6331 6723 (CGAGG)n 433 + 6331 6723 0 2 179,186, 0,206, +,+, 703779 Simple_repeat Simple_repeat 585 chrUn_NT_471989v1 5620 6246 (TGGA)n 533 + 5620 6246 0 2 267,343, 0,283, +,+, 703783 Simple_repeat Simple_repeat 585 chrUn_NT_471989v1 6295 6680 (TGGA)n 421 + 6295 6680 0 3 28,152,9, 0,44,376, +,+,+, 703785 Simple_repeat Simple_repeat 585 chrUn_NT_471991v1 1160 5452 GGXHOI 580 + 1160 5452 0 5 57,144,149,22,1404, 0,1922,2081,2630,2888, +,+,+,+,+, 703796 Satellite W-chromosome 585 chrUn_NT_471991v1 5470 7017 GGXHOI 518 + 5470 7017 0 2 1210,62, 0,1485, +,+, 703801 Satellite W-chromosome 585 chrUn_NT_471992v1 925 2044 GGXHOI 464 - 925 2044 0 3 278,325,489, 0,294,630, -,-,-, 703804 Satellite W-chromosome 585 chrUn_NT_471992v1 2168 6998 GGXHOI 453 - 2168 6998 0 8 338,269,2432,138,146,318,521,523, 0,379,667,3117,3269,3431,3765,4307, -,-,-,-,-,-,-,-, 703805 Satellite W-chromosome 585 chrUn_NT_471993v1 514 3396 (CGAGG)n 540 + 514 3396 0 7 175,989,572,257,187,179,324, 0,222,1246,1835,2126,2338,2558, +,+,+,+,+,+,+, 703809 Simple_repeat Simple_repeat 585 chrUn_NT_471993v1 3466 4401 (CGAGG)n 558 + 3466 4401 0 3 180,547,178, 0,199,757, +,+,+, 703810 Simple_repeat Simple_repeat 585 chrUn_NT_471993v1 4764 5144 (CGAGG)n 532 + 4764 5144 0 2 137,50, 0,330, +,+, 703814 Simple_repeat Simple_repeat 585 chrUn_NT_471993v1 5666 6301 (CGAGG)n 507 + 5666 6301 0 3 175,180,233, 0,209,402, +,+,+, 703820 Simple_repeat Simple_repeat 585 chrUn_NT_471993v1 6460 7014 (CGAGG)n 520 + 6460 7014 0 2 264,113, 0,441, +,+, 703822 Simple_repeat Simple_repeat 585 chrUn_NT_471994v1 3428 3569 (GTTCTTTCC)n 872 + 3428 3569 0 2 52,41, 0,100, +,+, 703827 Simple_repeat Simple_repeat 585 chrUn_NT_471995v1 2434 6553 GGXHOI 408 + 2434 6553 0 6 513,64,1897,451,401,625, 0,532,638,2579,3074,3494, +,+,+,+,+,+, 703834 Satellite W-chromosome 585 chrUn_NT_471998v1 486 995 (CCCCATTGGG)n 520 - 486 995 0 4 111,109,111,109, 0,125,254,400, -,-,-,-, 703838 Satellite Satellite 585 chrUn_NT_471998v1 1159 1440 (CCCCATTGGG)n 461 - 1159 1440 0 2 115,117, 0,164, -,-, 703840 Satellite Satellite 585 chrUn_NT_471998v1 1526 1777 (CCCCATTGGG)n 536 - 1526 1777 0 2 110,111, 0,140, -,-, 703841 Satellite Satellite 585 chrUn_NT_471998v1 2122 3090 (ACCCATAGAG)n 645 + 2122 3090 0 3 66,387,275, 0,188,693, +,+,+, 703843 Satellite Satellite 585 chrUn_NT_471998v1 3396 3801 (ACCCATAGGG)n 730 + 3396 3801 0 2 122,50, 0,355, +,+, 703848 Satellite Satellite 585 chrUn_NT_471999v1 5975 6200 (GCCCCACAGCT)n 410 + 5975 6200 0 2 98,85, 0,140, +,+, 703861 Satellite Satellite 585 chrUn_NT_472000v1 935 3333 GGXHOI 315 - 935 3333 0 3 1088,169,1105, 0,1106,1293, -,-,-, 703864 Satellite W-chromosome 585 chrUn_NT_472003v1 1577 6866 GGXHOI 401 + 1577 6866 0 3 1449,1313,2452, 0,1472,2837, +,+,+, 703875 Satellite W-chromosome 585 chrUn_NT_472004v1 5041 5543 GGXHOI 389 - 5041 5543 0 2 181,306, 0,196, -,-, 703877 Satellite W-chromosome 585 chrUn_NT_472004v1 5658 7005 GGXHOI 413 - 5658 7005 0 3 402,694,221, 0,417,1126, -,-,-, 703878 Satellite W-chromosome 585 chrUn_NT_472005v1 1627 2593 GGXHOI 348 + 1627 2593 0 2 396,528, 0,438, +,+, 703882 Satellite W-chromosome 585 chrUn_NT_472006v1 2103 3203 GGXHOI 343 - 2103 3203 0 2 863,217, 0,883, -,-, 703889 Satellite W-chromosome 585 chrUn_NT_472006v1 3410 4265 GGXHOI 329 - 3410 4265 0 2 542,254, 0,601, -,-, 703890 Satellite W-chromosome 585 chrUn_NT_472006v1 5139 6125 GGXHOI 325 - 5139 6125 0 3 448,133,310, 0,488,676, -,-,-, 703892 Satellite W-chromosome 585 chrUn_NT_472007v1 4529 4912 CR1-C4 536 + 4529 4912 0 2 53,240, 0,143, +,+, 703899 LINE CR1 585 chrUn_NT_472008v1 1390 4576 GGERV10_LTR 840 - 1390 4576 0 2 208,2967, 0,219, -,-, 703903 LTR ERVL 585 chrUn_NT_472010v1 2250 2732 GGXHOI 415 + 2250 2732 0 2 205,262, 0,220, +,+, 703909 Satellite W-chromosome 585 chrUn_NT_472010v1 2801 6596 GGXHOI 447 + 2801 6596 0 4 844,600,1058,1203, 0,860,1517,2592, +,+,+,+, 703910 Satellite W-chromosome 585 chrUn_NT_472011v1 481 1050 GGXHOI 291 + 481 1050 0 2 268,280, 0,289, +,+, 703913 Satellite W-chromosome 585 chrUn_NT_472011v1 4350 5911 GGXHOI 336 + 4350 5911 0 2 537,968, 0,593, +,+, 703919 Satellite W-chromosome 585 chrUn_NT_472012v1 1152 3981 GGXHOI 379 - 1152 3981 0 5 177,1257,270,383,610, 0,192,1472,1779,2219, -,-,-,-,-, 703923 Satellite W-chromosome 585 chrUn_NT_472014v1 4225 5875 GGLTR3F1 903 + 4225 5875 0 2 1174,476, 0,1174, +,+, 703956 LTR ERVL 585 chrUn_NT_472015v1 1509 2261 (CGAGG)n 542 + 1509 2261 0 3 320,113,127, 0,334,625, +,+,+, 703967 Simple_repeat Simple_repeat 585 chrUn_NT_472015v1 2373 3026 (CGAGG)n 547 + 2373 3026 0 2 275,319, 0,334, +,+, 703970 Simple_repeat Simple_repeat 585 chrUn_NT_472015v1 6400 6960 (CGAGG)n 545 + 6400 6960 0 3 169,179,174, 0,183,386, +,+,+, 703981 Simple_repeat Simple_repeat 585 chrUn_NT_472019v1 191 643 CR1-X2 284 - 191 643 0 2 216,227, 0,225, -,-, 703988 LINE CR1 585 chrUn_NT_472019v1 5418 6395 GGERVL-A-int 371 + 5418 6395 0 2 277,108, 0,869, +,+, 703992 LTR ERVL 585 chrUn_NT_472020v1 2365 2626 (CCCCATTGGG)n 502 - 2365 2626 0 2 108,115, 0,146, -,-, 703999 Satellite Satellite 585 chrUn_NT_472020v1 2694 3206 (CCCCATTGGG)n 489 - 2694 3206 0 3 122,216,109, 0,175,403, -,-,-, 704000 Satellite Satellite 585 chrUn_NT_472020v1 3687 3918 (CCCCATTGGG)n 416 - 3687 3918 0 2 98,120, 0,111, -,-, 704003 Satellite Satellite 585 chrUn_NT_472020v1 4175 4676 (ACCCATAGGG)n 672 + 4175 4676 0 2 164,219, 0,282, +,+, 704004 Satellite Satellite 585 chrUn_NT_472020v1 4667 5670 (ACCCATAGAG)n 662 + 4667 5670 0 2 824,57, 0,946, +,+, 704006 Satellite Satellite 585 chrUn_NT_472022v1 161 939 (CGAGG)n 527 + 161 939 0 3 86,177,469, 0,97,309, +,+,+, 704030 Simple_repeat Simple_repeat 585 chrUn_NT_472022v1 3523 4151 (CGAGG)n 509 + 3523 4151 0 3 168,178,173, 0,219,455, +,+,+, 704031 Simple_repeat Simple_repeat 585 chrUn_NT_472022v1 5102 6082 (CGAGG)n 534 + 5102 6082 0 3 178,335,403, 0,224,577, +,+,+, 704035 Simple_repeat Simple_repeat 585 chrUn_NT_472022v1 6215 6832 (CGAGG)n 528 + 6215 6832 0 2 414,178, 0,439, +,+, 704037 Simple_repeat Simple_repeat 585 chrUn_NT_472024v1 6675 6984 (CTCTATGGGG)n 312 + 6675 6984 0 2 135,121, 0,188, +,+, 704043 Satellite Satellite 585 chrUn_NT_472025v1 3098 4222 GGXHOI 420 - 3098 4222 0 2 409,667, 0,457, -,-, 704047 Satellite W-chromosome 585 chrUn_NT_472025v1 4388 5562 GGXHOI 397 - 4388 5562 0 3 551,259,312, 0,582,862, -,-,-, 704048 Satellite W-chromosome 585 chrUn_NT_472025v1 5972 6985 GGXHOI 418 - 5972 6985 0 2 529,468, 0,545, -,-, 704049 Satellite W-chromosome 585 chrUn_NT_472026v1 3918 4185 GGXHOI 400 + 3918 4185 0 2 152,92, 0,175, +,+, 704058 Satellite W-chromosome 585 chrUn_NT_472026v1 4993 6483 GGXHOI 374 + 4993 6483 0 2 451,1018, 0,472, +,+, 704062 Satellite W-chromosome 585 chrUn_NT_472027v1 1633 6698 GGXHOI 323 - 1633 6698 0 11 1834,235,371,181,172,711,342,196,154,488,138, 0,1853,2123,2509,2705,2895,3624,3983,4211,4427,4927, -,-,-,-,-,-,-,-,-,-,-, 704066 Satellite W-chromosome 585 chrUn_NT_472029v1 914 2435 GGXHOI 341 - 914 2435 0 3 225,738,474, 0,246,1047, -,-,-, 704081 Satellite W-chromosome 585 chrUn_NT_472029v1 4253 5935 GGXHOI 335 - 4253 5935 0 2 680,990, 0,692, -,-, 704084 Satellite W-chromosome 585 chrUn_NT_472030v1 6089 6957 GGXHOI 576 + 6089 6957 0 3 85,193,20, 0,341,848, +,+,+, 704096 Satellite W-chromosome 585 chrUn_NT_472032v1 6197 6964 GGXHOI 542 + 6197 6964 0 3 324,88,137, 0,344,630, +,+,+, 704109 Satellite W-chromosome 585 chrUn_NT_472034v1 548 6426 GGXHOI 373 + 548 6426 0 4 1711,2717,943,417, 0,1727,4460,5461, +,+,+,+, 704118 Satellite W-chromosome 585 chrUn_NT_472035v1 4246 6944 GGXHOI 542 - 4246 6944 0 5 319,196,222,200,328, 0,728,1214,1847,2370, -,-,-,-,-, 704126 Satellite W-chromosome 585 chrUn_NT_472036v1 422 833 CR1-C3 589 - 422 833 0 3 53,47,48, 0,316,363, -,-,-, 704137 LINE CR1 585 chrUn_NT_472036v1 871 1015 CR1-C3 596 - 871 1015 0 3 53,42,49, 0,53,95, -,-,-, 704143 LINE CR1 585 chrUn_NT_472036v1 1508 1608 CR1-C4 611 - 1508 1608 0 2 58,42, 0,58, -,-, 704151 LINE CR1 585 chrUn_NT_472036v1 1652 1742 CR1-C4 681 - 1652 1742 0 2 47,43, 0,47, -,-, 704153 LINE CR1 585 chrUn_NT_472036v1 3882 3976 CR1-C3 674 + 3882 3976 0 2 46,48, 0,46, +,+, 704158 LINE CR1 585 chrUn_NT_472040v1 3300 6968 ENS3-int 760 + 3300 6968 0 3 414,219,213, 0,414,3455, +,+,+, 704177 LTR ERVL 585 chrUn_NT_472040v1 3895 6764 ENS1-int 557 + 3895 6764 0 3 262,1809,796, 0,264,2073, +,+,+, 704178 LTR ERVL 585 chrUn_NT_472041v1 4257 4341 (GGTTTT)n 404 + 4257 4341 0 2 6,48, 0,36, +,+, 704182 Simple_repeat Simple_repeat 585 chrUn_NT_472042v1 4115 4480 (GCCCCACAGCT)n 458 - 4115 4480 0 2 73,168, 0,197, -,-, 704192 Satellite Satellite 585 chrUn_NT_472042v1 4376 4817 (ACCCATAGAG)n 549 - 4376 4817 0 3 124,107,109, 0,183,332, -,-,-, 704194 Satellite Satellite 585 chrUn_NT_472042v1 5191 5459 (GCCCCACAGCT)n 596 - 5191 5459 0 2 103,114, 0,154, -,-, 704197 Satellite Satellite 585 chrUn_NT_472042v1 5965 6247 (ACCCATAGAG)n 478 - 5965 6247 0 2 136,99, 0,183, -,-, 704201 Satellite Satellite 585 chrUn_NT_472043v1 3545 4584 (ACCCCATAGGG)n 573 + 3545 4584 0 6 299,153,67,120,2,141, 0,299,452,646,766,898, +,+,+,+,+,+, 704206 Satellite Satellite 585 chrUn_NT_472043v1 5299 5810 (ACCCCATAGGG)n 632 - 5299 5810 0 2 132,77, 0,434, -,-, 704213 Satellite Satellite 585 chrUn_NT_472043v1 5431 5647 (CTCTATGGGG)n 658 - 5431 5647 0 2 55,33, 0,183, -,-, 704214 Satellite Satellite 585 chrUn_NT_472043v1 5486 5948 (ACCCATAGAG)n 528 + 5486 5948 0 3 128,119,190, 0,128,272, +,+,+, 704215 Satellite Satellite 585 chrUn_NT_472043v1 5919 6953 (ACCCCATAGGG)n 648 + 5919 6953 0 4 379,171,185,153, 0,382,565,881, +,+,+,+, 704216 Satellite Satellite 585 chrUn_NT_472044v1 1810 3276 GGXHOI 548 - 1810 3276 0 2 164,1128, 0,338, -,-, 704220 Satellite W-chromosome 585 chrUn_NT_472044v1 4886 6335 GGXHOI 530 - 4886 6335 0 2 1020,210, 0,1239, -,-, 704223 Satellite W-chromosome 585 chrUn_NT_472045v1 1751 3314 GGXHOI 450 + 1751 3314 0 2 981,566, 0,997, +,+, 704227 Satellite W-chromosome 585 chrUn_NT_472045v1 4097 5542 GGXHOI 438 + 4097 5542 0 3 457,689,267, 0,473,1178, +,+,+, 704229 Satellite W-chromosome 585 chrUn_NT_472045v1 5635 6901 GGXHOI 402 + 5635 6901 0 4 266,351,237,362, 0,282,651,904, +,+,+,+, 704230 Satellite W-chromosome 585 chrUn_NT_472048v1 948 1920 (CGAGG)n 571 + 948 1920 0 3 183,203,62, 0,189,910, +,+,+, 704242 Simple_repeat Simple_repeat 585 chrUn_NT_472048v1 2047 2768 (CGAGG)n 584 + 2047 2768 0 3 114,17,101, 0,423,620, +,+,+, 704244 Simple_repeat Simple_repeat 585 chrUn_NT_472048v1 3077 4794 (CGAGG)n 553 + 3077 4794 0 5 386,187,172,70,388, 0,397,608,1214,1329, +,+,+,+,+, 704251 Simple_repeat Simple_repeat 585 chrUn_NT_472048v1 5281 6849 (CCTCG)n 437 + 5281 6849 0 3 1025,222,279, 0,1053,1289, +,+,+, 704257 Simple_repeat Simple_repeat 585 chrUn_NT_472049v1 2360 3694 GGXHOI 427 - 2360 3694 0 3 72,513,683, 0,115,651, -,-,-, 704261 Satellite W-chromosome 585 chrUn_NT_472049v1 3758 5383 GGXHOI 368 - 3758 5383 0 4 917,313,98,167, 0,963,1316,1458, -,-,-,-, 704262 Satellite W-chromosome 585 chrUn_NT_472051v1 2046 4085 CR1-B2 532 - 2046 4085 0 2 132,204, 0,1835, -,-, 704273 LINE CR1 585 chrUn_NT_472052v1 5362 5612 CR1-X 490 - 5362 5612 0 2 79,171, 0,79, -,-, 704283 LINE CR1 585 chrUn_NT_472054v1 1578 2597 GGXHOI 350 - 1578 2597 0 5 103,175,396,129,139, 0,116,305,736,880, -,-,-,-,-, 704291 Satellite W-chromosome 585 chrUn_NT_472054v1 2707 4164 GGXHOI 407 - 2707 4164 0 3 811,175,422, 0,849,1035, -,-,-, 704292 Satellite W-chromosome 585 chrUn_NT_472054v1 4837 6138 GGXHOI 327 - 4837 6138 0 5 280,313,206,140,217, 0,299,627,885,1084, -,-,-,-,-, 704295 Satellite W-chromosome 585 chrUn_NT_472054v1 6310 6743 GGXHOI 349 - 6310 6743 0 2 134,241, 0,192, -,-, 704296 Satellite W-chromosome 585 chrUn_NT_472055v1 2653 4279 GGXHOI 560 - 2653 4279 0 2 942,371, 0,1255, -,-, 704302 Satellite W-chromosome 585 chrUn_NT_472055v1 4329 5263 GGXHOI 560 + 4329 5263 0 2 157,122, 0,812, +,+, 704303 Satellite W-chromosome 585 chrUn_NT_472055v1 5380 6961 GGXHOI 497 + 5380 6961 0 3 283,738,218, 0,597,1363, +,+,+, 704305 Satellite W-chromosome 585 chrUn_NT_472057v1 4583 4713 (T)n 810 + 4583 4713 0 2 27,64, 0,66, +,+, 704313 Simple_repeat Simple_repeat 585 chrUn_NT_472059v1 640 5018 GGXHOI 409 - 640 5018 0 4 1014,936,103,2275, 0,1029,1985,2103, -,-,-,-, 704322 Satellite W-chromosome 585 chrUn_NT_472059v1 5359 6948 GGXHOI 405 - 5359 6948 0 3 231,1055,268, 0,246,1321, -,-,-, 704323 Satellite W-chromosome 585 chrUn_NT_472061v1 1611 3742 GGLTR7-int 648 - 1611 3742 0 5 793,92,54,169,357, 0,801,982,1125,1774, -,-,-,-,-, 704327 LTR ERV1 585 chrUn_NT_472062v1 746 2465 GGXHOI 519 - 746 2465 0 4 21,504,266,204, 0,363,909,1515, -,-,-,-, 704335 Satellite W-chromosome 585 chrUn_NT_472062v1 2553 2998 GGXHOI 624 - 2553 2998 0 2 33,136, 0,309, -,-, 704338 Satellite W-chromosome 585 chrUn_NT_472062v1 3064 3621 GGXHOI 524 - 3064 3621 0 2 20,202, 0,355, -,-, 704340 Satellite W-chromosome 585 chrUn_NT_472062v1 3969 6937 GGXHOI 543 - 3969 6937 0 6 278,814,428,253,20,52, 0,612,1763,2393,2675,2916, -,-,-,-,-,-, 704344 Satellite W-chromosome 585 chrUn_NT_472063v1 4432 4828 (ACCCCATAGGG)n 662 - 4432 4828 0 2 172,197, 0,199, -,-, 704355 Satellite Satellite 585 chrUn_NT_472063v1 5012 6595 (ACCCCATAGGG)n 650 - 5012 6595 0 8 135,172,96,152,179,306,93,63, 0,135,308,528,680,859,1291,1520, -,-,-,-,-,-,-,-, 704358 Satellite Satellite 585 chrUn_NT_472064v1 4614 6942 GGXHOI 589 - 4614 6942 0 4 407,297,149,117, 0,1080,1388,2211, -,-,-,-, 704367 Satellite W-chromosome 585 chrUn_NT_472065v1 595 1643 (CCTCG)n 504 + 595 1643 0 3 179,633,196, 0,194,852, +,+,+, 704373 Simple_repeat Simple_repeat 585 chrUn_NT_472065v1 1920 4317 GGERV10_LTR 894 + 1920 4317 0 2 37,38, 0,2359, +,+, 704376 LTR ERVL 585 chrUn_NT_472065v1 1958 4148 GGLTR10D-int 913 + 1958 4148 0 2 1822,365, 0,1825, +,+, 704377 LTR ERVK 585 chrUn_NT_472065v1 4329 6776 GGLTR7-int 578 - 4329 6776 0 2 792,338, 0,2109, -,-, 704378 LTR ERV1 585 chrUn_NT_472066v1 241 819 (CGAGG)n 523 + 241 819 0 2 352,168, 0,410, +,+, 704382 Simple_repeat Simple_repeat 585 chrUn_NT_472066v1 874 1239 (CGAGG)n 510 + 874 1239 0 2 106,95, 0,270, +,+, 704384 Simple_repeat Simple_repeat 585 chrUn_NT_472066v1 1439 2123 (CGAGG)n 516 + 1439 2123 0 3 209,10,259, 0,387,425, +,+,+, 704387 Simple_repeat Simple_repeat 585 chrUn_NT_472066v1 2237 3004 (CGAGG)n 519 + 2237 3004 0 2 365,355, 0,412, +,+, 704390 Simple_repeat Simple_repeat 585 chrUn_NT_472066v1 5383 5989 (CGAGG)n 532 + 5383 5989 0 3 174,170,194, 0,210,412, +,+,+, 704400 Simple_repeat Simple_repeat 585 chrUn_NT_472069v1 1876 5581 GGXHOI 407 - 1876 5581 0 6 736,234,1538,399,442,244, 0,775,1026,2580,2999,3461, -,-,-,-,-,-, 704431 Satellite W-chromosome 585 chrUn_NT_472069v1 5706 6899 GGXHOI 396 - 5706 6899 0 3 734,267,144, 0,754,1049, -,-,-, 704432 Satellite W-chromosome 585 chrUn_NT_472070v1 2291 3413 GGXHOI 544 + 2291 3413 0 3 159,196,31, 0,594,1091, +,+,+, 704438 Satellite W-chromosome 585 chrUn_NT_472070v1 3545 6934 GGXHOI 470 + 3545 6934 0 4 435,368,186,1470, 0,758,1411,1919, +,+,+,+, 704441 Satellite W-chromosome 585 chrUn_NT_472072v1 3430 6525 GGXHOI 393 + 3430 6525 0 3 2131,222,712, 0,2149,2383, +,+,+, 704454 Satellite W-chromosome 585 chrUn_NT_472075v1 2380 4932 GGXHOI 561 - 2380 4932 0 2 2096,438, 0,2114, -,-, 704470 Satellite W-chromosome 585 chrUn_NT_472075v1 5012 5696 GGXHOI 589 - 5012 5696 0 2 163,474, 0,210, -,-, 704471 Satellite W-chromosome 585 chrUn_NT_472075v1 5760 6931 GGXHOI 554 - 5760 6931 0 2 494,494, 0,677, -,-, 704472 Satellite W-chromosome 585 chrUn_NT_472076v1 6271 6670 (CTCTATGGGG)n 443 + 6271 6670 0 2 119,249, 0,150, +,+, 704476 Satellite Satellite 585 chrUn_NT_472077v1 1922 5818 GGXHOI 447 - 1922 5818 0 5 2265,378,655,289,149, 0,2311,2706,3411,3747, -,-,-,-,-, 704478 Satellite W-chromosome 585 chrUn_NT_472078v1 2741 4440 GGERVL-A-int 534 + 2741 4440 0 2 456,1243, 0,456, +,+, 704481 LTR ERVL 585 chrUn_NT_472081v1 642 1007 (ACCCCATAGGG)n 548 + 642 1007 0 2 130,201, 0,164, +,+, 704515 Satellite Satellite 585 chrUn_NT_472081v1 1771 2068 (ACCCCATAGGG)n 546 + 1771 2068 0 2 125,132, 0,165, +,+, 704519 Satellite Satellite 585 chrUn_NT_472081v1 2158 2451 (ACCCCATAGGG)n 510 + 2158 2451 0 2 128,140, 0,153, +,+, 704520 Satellite Satellite 585 chrUn_NT_472081v1 3640 4529 (ACCCCATAGGG)n 579 + 3640 4529 0 3 460,130,234, 0,493,655, +,+,+, 704525 Satellite Satellite 585 chrUn_NT_472081v1 4693 6184 (ACCCCATAGGG)n 526 + 4693 6184 0 7 107,327,119,369,128,132,134, 0,120,478,610,1028,1201,1357, +,+,+,+,+,+,+, 704526 Satellite Satellite 585 chrUn_NT_472082v1 4964 5878 GGXHOI 388 + 4964 5878 0 2 377,474, 0,440, +,+, 704534 Satellite W-chromosome 585 chrUn_NT_472083v1 6494 6736 (CCCCATTGGG)n 465 + 6494 6736 0 2 108,89, 0,153, +,+, 704554 Satellite Satellite 585 chrUn_NT_472084v1 5539 6128 (ACCCCATAGGG)n 338 + 5539 6128 0 4 161,121,128,107, 0,179,336,482, +,+,+,+, 704561 Satellite Satellite 585 chrUn_NT_472084v1 6376 6934 (ACCCCATAGGG)n 345 + 6376 6934 0 4 107,110,121,120, 0,134,284,438, +,+,+,+, 704563 Satellite Satellite 585 chrUn_NT_472085v1 2809 4107 GGXHOI 345 - 2809 4107 0 5 117,147,519,147,269, 0,131,320,850,1029, -,-,-,-,-, 704565 Satellite W-chromosome 585 chrUn_NT_472085v1 4184 5290 GGXHOI 349 - 4184 5290 0 5 180,123,153,165,351, 0,226,399,566,755, -,-,-,-,-, 704566 Satellite W-chromosome 585 chrUn_NT_472085v1 5361 6909 GGXHOI 386 - 5361 6909 0 4 173,390,731,154, 0,215,626,1394, -,-,-,-, 704567 Satellite W-chromosome 585 chrUn_NT_472087v1 1245 3696 GGERVL-B-int 727 + 1245 3696 0 3 306,1242,903, 0,306,1548, +,+,+, 704597 LTR ERVL 585 chrUn_NT_472087v1 4539 5889 GGLTR7-int 223 + 4539 5889 0 2 319,289, 0,1061, +,+, 704599 LTR ERV1 585 chrUn_NT_472088v1 5843 5983 (GTGCGCTCT)n 782 + 5843 5983 0 2 75,48, 0,92, +,+, 704607 Simple_repeat Simple_repeat 585 chrUn_NT_472090v1 4030 4253 G-rich 301 + 4030 4253 0 2 138,43, 0,180, +,+, 704614 Low_complexity Low_complexity 585 chrUn_NT_472090v1 4738 6893 GGLTR7-int 542 + 4738 6893 0 2 327,787, 0,1368, +,+, 704616 LTR ERV1 585 chrUn_NT_472091v1 1082 2444 GGLTR7-int 304 + 1082 2444 0 3 101,305,265, 0,103,1097, +,+,+, 704621 LTR ERV1 585 chrUn_NT_472092v1 2206 4553 GGXHOI 510 + 2206 4553 0 5 218,243,302,340,18, 0,601,1139,1667,2329, +,+,+,+,+, 704630 Satellite W-chromosome 585 chrUn_NT_472092v1 4628 6611 GGXHOI 560 + 4628 6611 0 5 267,194,217,132,194, 0,589,1106,1339,1789, +,+,+,+,+, 704635 Satellite W-chromosome 585 chrUn_NT_472094v1 5115 5738 CR1-H 685 - 5115 5738 0 2 139,478, 0,145, -,-, 704649 LINE CR1 585 chrUn_NT_472096v1 2682 6916 GGXHOI 341 - 2682 6916 0 4 157,272,2595,1121, 0,208,502,3113, -,-,-,-, 704656 Satellite W-chromosome 585 chrUn_NT_472097v1 483 6897 GGXHOI 440 - 483 6897 0 10 1434,416,648,151,406,1469,268,947,114,331, 0,1448,1906,2570,2740,3188,4669,4952,5912,6083, -,-,-,-,-,-,-,-,-,-, 704658 Satellite W-chromosome 585 chrUn_NT_472098v1 79 5515 CR1-F 545 + 79 5515 0 17 198,203,204,155,200,190,200,203,204,204,155,201,191,200,203,203,185, 0,240,485,955,1400,1645,1877,2376,2621,2867,3337,3782,4028,4261,4761,5006,5251, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 704660 LINE CR1 585 chrUn_NT_472103v1 5911 6774 GGXHOI 429 + 5911 6774 0 2 157,686, 0,177, +,+, 704704 Satellite W-chromosome 585 chrUn_NT_472105v1 1039 1399 GGXHOI 323 - 1039 1399 0 2 209,134, 0,226, -,-, 704709 Satellite W-chromosome 585 chrUn_NT_472105v1 1499 2462 GGXHOI 378 - 1499 2462 0 4 317,156,125,286, 0,339,536,677, -,-,-,-, 704710 Satellite W-chromosome 585 chrUn_NT_472105v1 2559 4066 GGXHOI 400 - 2559 4066 0 4 176,908,205,146, 0,192,1122,1361, -,-,-,-, 704711 Satellite W-chromosome 585 chrUn_NT_472105v1 4130 5395 GGXHOI 340 - 4130 5395 0 3 144,580,463, 0,184,802, -,-,-, 704712 Satellite W-chromosome 585 chrUn_NT_472105v1 5782 6853 GGXHOI 431 - 5782 6853 0 3 134,766,137, 0,155,934, -,-,-, 704714 Satellite W-chromosome 585 chrUn_NT_472106v1 1072 1591 (CAAGG)n 650 + 1072 1591 0 2 249,88, 0,431, +,+, 704719 Simple_repeat Simple_repeat 585 chrUn_NT_472106v1 1661 2649 (CAAGG)n 558 + 1661 2649 0 3 161,258,217, 0,334,771, +,+,+, 704721 Simple_repeat Simple_repeat 585 chrUn_NT_472106v1 2959 3369 (CAAGG)n 504 + 2959 3369 0 2 182,193, 0,217, +,+, 704727 Simple_repeat Simple_repeat 585 chrUn_NT_472106v1 3461 6908 (CAAGG)n 632 + 3461 6908 0 10 190,383,103,303,141,94,56,270,459,313, 0,227,637,1233,1721,1862,2127,2209,2657,3134, +,+,+,+,+,+,+,+,+,+, 704728 Simple_repeat Simple_repeat 585 chrUn_NT_472107v1 653 1153 (CGAGG)n 536 + 653 1153 0 2 224,95, 0,405, +,+, 704739 Simple_repeat Simple_repeat 585 chrUn_NT_472107v1 2516 3827 (CGAGG)n 525 + 2516 3827 0 7 132,177,181,177,98,65,178, 0,150,343,553,769,1051,1133, +,+,+,+,+,+,+, 704749 Simple_repeat Simple_repeat 585 chrUn_NT_472107v1 4160 5995 (CGAGG)n 510 + 4160 5995 0 5 181,178,309,594,473, 0,215,421,730,1362, +,+,+,+,+, 704752 Simple_repeat Simple_repeat 585 chrUn_NT_472113v1 2156 2637 GGXHOI 265 - 2156 2637 0 3 155,110,154, 0,201,327, -,-,-, 704781 Satellite W-chromosome 585 chrUn_NT_472113v1 3220 4769 GGXHOI 366 - 3220 4769 0 6 392,132,49,250,140,458, 0,406,581,673,938,1091, -,-,-,-,-,-, 704783 Satellite W-chromosome 585 chrUn_NT_472113v1 4857 6857 GGXHOI 435 - 4857 6857 0 2 1616,328, 0,1672, -,-, 704784 Satellite W-chromosome 585 chrUn_NT_472114v1 970 3418 GGXHOI 402 - 970 3418 0 4 427,599,715,633, 0,445,1060,1815, -,-,-,-, 704786 Satellite W-chromosome 585 chrUn_NT_472114v1 4524 6309 GGXHOI 444 - 4524 6309 0 2 473,1296, 0,489, -,-, 704788 Satellite W-chromosome 585 chrUn_NT_472115v1 703 6854 GGXHOI 590 - 703 6854 0 11 431,278,148,299,148,299,148,299,148,299,665, 0,669,958,1780,2090,2912,3222,4044,4354,5176,5486, -,-,-,-,-,-,-,-,-,-,-, 704791 Satellite W-chromosome 585 chrUn_NT_472116v1 2958 3965 GGXHOI 351 - 2958 3965 0 2 222,729, 0,278, -,-, 704799 Satellite W-chromosome 585 chrUn_NT_472116v1 4505 5604 GGXHOI 319 - 4505 5604 0 2 342,715, 0,384, -,-, 704801 Satellite W-chromosome 585 chrUn_NT_472116v1 5721 6898 GGXHOI 386 - 5721 6898 0 2 410,728, 0,449, -,-, 704802 Satellite W-chromosome 585 chrUn_NT_472117v1 4872 5431 (ACCCCATAGGG)n 349 + 4872 5431 0 3 122,272,110, 0,147,449, +,+,+, 704804 Satellite Satellite 585 chrUn_NT_472117v1 5518 5777 (ACCCCATAGGG)n 417 + 5518 5777 0 2 119,116, 0,143, +,+, 704805 Satellite Satellite 585 chrUn_NT_472119v1 3447 4037 (CAAGG)n 653 + 3447 4037 0 3 181,187,184, 0,181,406, +,+,+, 704816 Simple_repeat Simple_repeat 585 chrUn_NT_472119v1 4487 5096 (CAAGG)n 643 + 4487 5096 0 2 398,209, 0,400, +,+, 704820 Simple_repeat Simple_repeat 585 chrUn_NT_472119v1 5610 6198 (CAAGG)n 637 + 5610 6198 0 3 187,187,214, 0,187,374, +,+,+, 704824 Simple_repeat Simple_repeat 585 chrUn_NT_472119v1 6428 6873 (CAAGG)n 613 + 6428 6873 0 2 237,208, 0,237, +,+, 704826 Simple_repeat Simple_repeat 585 chrUn_NT_472120v1 3683 4172 CR1-Y4 624 - 3683 4172 0 2 289,195, 0,294, -,-, 704828 LINE CR1 585 chrUn_NT_472121v1 1010 5302 GGXHOI 425 - 1010 5302 0 6 559,1141,1141,1065,146,151, 0,579,1740,2901,3979,4141, -,-,-,-,-,-, 704834 Satellite W-chromosome 585 chrUn_NT_472121v1 5488 6888 GGXHOI 425 - 5488 6888 0 2 729,651, 0,749, -,-, 704835 Satellite W-chromosome 585 chrUn_NT_472123v1 227 954 (CCTCG)n 485 + 227 954 0 2 15,656, 0,71, +,+, 704839 Simple_repeat Simple_repeat 585 chrUn_NT_472123v1 1720 2089 (CCTCG)n 447 + 1720 2089 0 2 173,177, 0,192, +,+, 704843 Simple_repeat Simple_repeat 585 chrUn_NT_472123v1 2424 3356 (CCTCG)n 494 + 2424 3356 0 2 690,202, 0,730, +,+, 704845 Simple_repeat Simple_repeat 585 chrUn_NT_472123v1 4620 5621 (CCTCG)n 489 + 4620 5621 0 3 188,307,449, 0,228,552, +,+,+, 704851 Simple_repeat Simple_repeat 585 chrUn_NT_472124v1 764 2076 (CGAGG)n 573 + 764 2076 0 4 222,535,99,204, 0,240,952,1108, +,+,+,+, 704858 Simple_repeat Simple_repeat 585 chrUn_NT_472124v1 2118 3233 (CGAGG)n 516 + 2118 3233 0 2 733,204, 0,911, +,+, 704861 Simple_repeat Simple_repeat 585 chrUn_NT_472124v1 5068 6166 (CGAGG)n 512 + 5068 6166 0 2 709,344, 0,754, +,+, 704869 Simple_repeat Simple_repeat 585 chrUn_NT_472125v1 92 269 CR1-F2 487 + 92 269 0 2 93,84, 0,93, +,+, 704876 LINE CR1 585 chrUn_NT_472125v1 5962 6188 CR1-C4 612 + 5962 6188 0 2 135,48, 0,178, +,+, 704882 LINE CR1 585 chrUn_NT_472126v1 2649 3088 GGXHOI 338 - 2649 3088 0 2 276,126, 0,313, -,-, 704888 Satellite W-chromosome 585 chrUn_NT_472126v1 3160 5607 GGXHOI 393 - 3160 5607 0 5 433,415,643,161,700, 0,456,887,1545,1747, -,-,-,-,-, 704889 Satellite W-chromosome 585 chrUn_NT_472126v1 5723 6882 GGXHOI 358 - 5723 6882 0 4 251,223,146,485, 0,262,504,674, -,-,-,-, 704890 Satellite W-chromosome 585 chrUn_NT_472128v1 322 2727 GGERV10_LTR 874 + 322 2727 0 2 41,38, 0,2367, +,+, 704895 LTR ERVL 585 chrUn_NT_472128v1 364 2565 GGLTR10D-int 912 + 364 2565 0 2 1838,360, 0,1841, +,+, 704896 LTR ERVK 585 chrUn_NT_472128v1 2739 5180 GGLTR7-int 589 - 2739 5180 0 2 787,338, 0,2103, -,-, 704897 LTR ERV1 585 chrUn_NT_472129v1 974 2922 GGXHOI 371 + 974 2922 0 2 878,1007, 0,941, +,+, 704902 Satellite W-chromosome 585 chrUn_NT_472129v1 5929 6361 GGXHOI 314 + 5929 6361 0 2 181,199, 0,233, +,+, 704906 Satellite W-chromosome 585 chrUn_NT_472130v1 551 1783 GGXHOI 363 - 551 1783 0 2 822,393, 0,839, -,-, 704909 Satellite W-chromosome 585 chrUn_NT_472130v1 1882 2798 GGXHOI 369 - 1882 2798 0 2 512,342, 0,574, -,-, 704910 Satellite W-chromosome 585 chrUn_NT_472131v1 1351 6890 GGXHOI 385 + 1351 6890 0 19 154,161,445,150,140,148,78,134,140,280,158,296,312,908,435,79,625,163,271, 0,181,382,843,1011,1177,1338,1453,1645,1801,2101,2275,2587,2913,3855,4345,4454,5094,5268, +,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+, 704919 Satellite W-chromosome 585 chrUn_NT_472133v1 992 5582 GGXHOI 429 + 992 5582 0 6 690,683,1918,350,642,224, 0,706,1405,3340,3707,4366, +,+,+,+,+,+, 704930 Satellite W-chromosome 585 chrUn_NT_472133v1 5824 6732 GGXHOI 376 + 5824 6732 0 2 413,474, 0,434, +,+, 704931 Satellite W-chromosome 585 chrUn_NT_472134v1 636 1380 G-rich 455 + 636 1380 0 2 31,658, 0,86, +,+, 704933 Low_complexity Low_complexity 585 chrUn_NT_472135v1 3900 5795 GGXHOI 409 - 3900 5795 0 3 1474,259,127, 0,1494,1768, -,-,-, 704941 Satellite W-chromosome 585 chrUn_NT_472135v1 5881 6868 GGXHOI 368 - 5881 6868 0 2 613,350, 0,637, -,-, 704942 Satellite W-chromosome 585 chrUn_NT_472137v1 1166 2003 GGXHOI 371 - 1166 2003 0 2 550,269, 0,568, -,-, 704945 Satellite W-chromosome 585 chrUn_NT_472137v1 3453 5708 GGXHOI 316 - 3453 5708 0 3 525,1509,187, 0,541,2068, -,-,-, 704948 Satellite W-chromosome 585 chrUn_NT_472138v1 3242 3962 (CTCTATGGGG)n 628 - 3242 3962 0 3 215,199,239, 0,271,481, -,-,-, 704952 Satellite Satellite 585 chrUn_NT_472138v1 5832 6180 (CTCTATGGGG)n 594 + 5832 6180 0 2 56,176, 0,172, +,+, 704959 Satellite Satellite 585 chrUn_NT_472139v1 951 4102 GGXHOI 563 - 951 4102 0 3 1261,78,386, 0,2644,2765, -,-,-, 704963 Satellite W-chromosome 585 chrUn_NT_472139v1 4648 6876 GGXHOI 522 - 4648 6876 0 3 397,230,245, 0,1716,1983, -,-,-, 704966 Satellite W-chromosome 585 chrUn_NT_472142v1 3256 4104 GGXHOI 341 + 3256 4104 0 3 277,141,344, 0,321,504, +,+,+, 705007 Satellite W-chromosome 585 chrUn_NT_472142v1 4277 4631 GGXHOI 316 + 4277 4631 0 2 216,123, 0,231, +,+, 705008 Satellite W-chromosome 585 chrUn_NT_472142v1 6023 6863 GGXHOI 367 + 6023 6863 0 3 403,224,148, 0,445,692, +,+,+, 705010 Satellite W-chromosome 585 chrUn_NT_472143v1 3713 5784 GGXHOI 368 - 3713 5784 0 2 1456,595, 0,1476, -,-, 705013 Satellite W-chromosome 585 chrUn_NT_472144v1 254 597 (CTCTATGGGG)n 416 - 254 597 0 2 141,150, 0,193, -,-, 705017 Satellite Satellite 585 chrUn_NT_472144v1 705 1183 (CTCTATGGGG)n 390 + 705 1183 0 2 166,60, 0,418, +,+, 705019 Satellite Satellite 585 chrUn_NT_472147v1 3054 3804 CR1-C2 650 + 3054 3804 0 2 398,56, 0,694, +,+, 705041 LINE CR1 585 chrUn_NT_472148v1 104 690 (CGAGG)n 539 + 104 690 0 3 178,179,187, 0,192,399, +,+,+, 705046 Simple_repeat Simple_repeat 585 chrUn_NT_472148v1 1974 2442 (CGAGG)n 504 + 1974 2442 0 2 231,180, 0,288, +,+, 705052 Simple_repeat Simple_repeat 585 chrUn_NT_472148v1 2543 3933 (CGAGG)n 551 + 2543 3933 0 5 183,178,183,512,186, 0,204,425,647,1204, +,+,+,+,+, 705054 Simple_repeat Simple_repeat 585 chrUn_NT_472148v1 5693 6400 (CGAGG)n 563 + 5693 6400 0 3 180,306,176, 0,213,531, +,+,+, 705063 Simple_repeat Simple_repeat 585 chrUn_NT_472149v1 5264 6856 GGXHOI 370 - 5264 6856 0 2 835,745, 0,847, -,-, 705068 Satellite W-chromosome 585 chrUn_NT_472150v1 1958 2699 (CGAGG)n 479 + 1958 2699 0 3 342,180,185, 0,357,556, +,+,+, 705077 Simple_repeat Simple_repeat 585 chrUn_NT_472150v1 3325 4765 (CGAGG)n 507 + 3325 4765 0 5 385,198,92,10,354, 0,566,943,1065,1086, +,+,+,+,+, 705081 Simple_repeat Simple_repeat 585 chrUn_NT_472152v1 1835 2422 GGXHOI 462 - 1835 2422 0 2 69,147, 0,440, -,-, 705111 Satellite W-chromosome 585 chrUn_NT_472152v1 3623 5954 GGXHOI 503 - 3623 5954 0 4 141,393,375,886, 0,185,889,1445, -,-,-,-, 705114 Satellite W-chromosome 585 chrUn_NT_472152v1 6035 6829 GGXHOI 568 - 6035 6829 0 2 16,470, 0,324, -,-, 705117 Satellite W-chromosome 585 chrUn_NT_472154v1 2593 2883 GGXHOI 298 + 2593 2883 0 2 133,120, 0,170, +,+, 705136 Satellite W-chromosome 585 chrUn_NT_472154v1 2954 4860 GGXHOI 418 + 2954 4860 0 3 455,972,428, 0,472,1478, +,+,+, 705137 Satellite W-chromosome 585 chrUn_NT_472154v1 4982 5444 GGXHOI 308 + 4982 5444 0 2 139,309, 0,153, +,+, 705138 Satellite W-chromosome 585 chrUn_NT_472154v1 5510 6862 GGXHOI 418 + 5510 6862 0 4 636,179,139,288, 0,652,875,1064, +,+,+,+, 705139 Satellite W-chromosome 585 chrUn_NT_472158v1 209 3028 GGXHOI 576 - 209 3028 0 3 195,326,860, 0,784,1959, -,-,-, 705153 Satellite W-chromosome 585 chrUn_NT_472158v1 3077 4254 GGXHOI 397 - 3077 4254 0 3 181,113,855, 0,197,322, -,-,-, 705157 Satellite W-chromosome 585 chrUn_NT_472161v1 1981 3360 GGLTR7-int 280 + 1981 3360 0 3 104,298,285, 0,105,1094, +,+,+, 705174 LTR ERV1 585 chrUn_NT_472167v1 434 1035 (CCTTG)n 544 + 434 1035 0 2 224,353, 0,248, +,+, 705217 Simple_repeat Simple_repeat 585 chrUn_NT_472167v1 3071 3579 (CAAGG)n 475 + 3071 3579 0 2 242,240, 0,268, +,+, 705230 Simple_repeat Simple_repeat 585 chrUn_NT_472167v1 4750 5612 (CCTTG)n 496 + 4750 5612 0 3 224,189,419, 0,254,443, +,+,+, 705235 Simple_repeat Simple_repeat 585 chrUn_NT_472167v1 5971 6373 (CAAGG)n 542 + 5971 6373 0 3 41,82,190, 0,130,212, +,+,+, 705238 Simple_repeat Simple_repeat 585 chrUn_NT_472169v1 371 1412 GGXHOI 387 + 371 1412 0 2 469,512, 0,529, +,+, 705245 Satellite W-chromosome 585 chrUn_NT_472169v1 3656 5197 GGXHOI 367 + 3656 5197 0 2 406,1074, 0,467, +,+, 705249 Satellite W-chromosome 585 chrUn_NT_472169v1 5262 6297 GGXHOI 321 + 5262 6297 0 2 450,525, 0,510, +,+, 705250 Satellite W-chromosome 585 chrUn_NT_472170v1 5845 6715 GGXHOI 257 + 5845 6715 0 2 164,673, 0,197, +,+, 705253 Satellite W-chromosome 585 chrUn_NT_472172v1 3306 4085 GGXHOI 576 + 3306 4085 0 2 193,278, 0,501, +,+, 705266 Satellite W-chromosome 585 chrUn_NT_472172v1 4127 5235 GGXHOI 562 + 4127 5235 0 2 442,217, 0,891, +,+, 705269 Satellite W-chromosome 585 chrUn_NT_472172v1 5614 6827 GGXHOI 507 + 5614 6827 0 4 156,19,382,139, 0,604,636,1074, +,+,+,+, 705272 Satellite W-chromosome 585 chrUn_NT_472174v1 588 2827 GGXHOI 348 - 588 2827 0 4 149,1574,299,136, 0,170,1769,2103, -,-,-,-, 705277 Satellite W-chromosome 585 chrUn_NT_472174v1 3764 6789 GGXHOI 371 - 3764 6789 0 3 1708,845,428, 0,1731,2597, -,-,-, 705279 Satellite W-chromosome 585 chrUn_NT_472175v1 1081 2926 (CAAGG)n 593 + 1081 2926 0 7 118,268,181,188,216,214,372, 0,302,587,806,1024,1246,1473, +,+,+,+,+,+,+, 705283 Simple_repeat Simple_repeat 585 chrUn_NT_472175v1 2945 3324 (CAAGG)n 633 + 2945 3324 0 2 184,184, 0,195, +,+, 705286 Simple_repeat Simple_repeat 585 chrUn_NT_472175v1 3420 3822 (CAAGG)n 604 + 3420 3822 0 2 177,190, 0,212, +,+, 705288 Simple_repeat Simple_repeat 585 chrUn_NT_472175v1 3908 5661 (CAAGG)n 611 + 3908 5661 0 4 237,197,261,1041, 0,239,436,712, +,+,+,+, 705290 Simple_repeat Simple_repeat 585 chrUn_NT_472175v1 5751 6835 (CAAGG)n 668 + 5751 6835 0 3 180,290,399, 0,218,685, +,+,+, 705292 Simple_repeat Simple_repeat 585 chrUn_NT_472178v1 2023 6812 GGXHOI 373 - 2023 6812 0 5 235,1292,449,2473,264, 0,246,1561,2040,4525, -,-,-,-,-, 705311 Satellite W-chromosome 585 chrUn_NT_472179v1 1452 6832 GGXHOI 389 - 1452 6832 0 5 1876,559,1763,754,370, 0,1889,2461,4238,5010, -,-,-,-,-, 705313 Satellite W-chromosome 585 chrUn_NT_472181v1 2136 2759 CR1-H 685 - 2136 2759 0 2 139,478, 0,145, -,-, 705334 LINE CR1 585 chrUn_NT_472181v1 5652 6108 CR1-H 673 - 5652 6108 0 2 163,293, 0,163, -,-, 705338 LINE CR1 585 chrUn_NT_472183v1 1268 3641 GGXHOI 388 - 1268 3641 0 4 651,129,678,814, 0,692,866,1559, -,-,-,-, 705369 Satellite W-chromosome 585 chrUn_NT_472183v1 3736 5378 GGXHOI 334 - 3736 5378 0 5 96,402,776,102,126, 0,118,563,1376,1516, -,-,-,-,-, 705370 Satellite W-chromosome 585 chrUn_NT_472183v1 6141 6802 GGXHOI 329 - 6141 6802 0 2 255,362, 0,299, -,-, 705372 Satellite W-chromosome 585 chrUn_NT_472185v1 586 1637 GGXHOI 392 + 586 1637 0 2 472,516, 0,535, +,+, 705381 Satellite W-chromosome 585 chrUn_NT_472185v1 1736 3891 GGXHOI 387 + 1736 3891 0 3 473,1083,516, 0,495,1639, +,+,+, 705382 Satellite W-chromosome 585 chrUn_NT_472187v1 1244 1522 GGXHOI 418 + 1244 1522 0 2 91,151, 0,127, +,+, 705397 Satellite W-chromosome 585 chrUn_NT_472187v1 2363 3711 GGXHOI 285 + 2363 3711 0 4 434,253,395,139, 0,451,764,1209, +,+,+,+, 705399 Satellite W-chromosome 585 chrUn_NT_472187v1 4447 4858 GGXHOI 351 + 4447 4858 0 2 141,230, 0,181, +,+, 705401 Satellite W-chromosome 585 chrUn_NT_472187v1 4998 6815 GGXHOI 373 + 4998 6815 0 2 1281,487, 0,1330, +,+, 705402 Satellite W-chromosome 585 chrUn_NT_472188v1 739 2579 GGXHOI 419 + 739 2579 0 2 1495,334, 0,1506, +,+, 705404 Satellite W-chromosome 585 chrUn_NT_472188v1 3755 6824 GGXHOI 384 + 3755 6824 0 4 1951,166,423,405, 0,2004,2224,2664, +,+,+,+, 705406 Satellite W-chromosome 585 chrUn_NT_472190v1 1754 2631 GGLTR12C 584 - 1754 2631 0 2 213,645, 0,232, -,-, 705411 LTR ERVL 585 chrUn_NT_472192v1 722 6828 GGXHOI 376 - 722 6828 0 6 2167,2926,426,95,110,268, 0,2185,5129,5573,5704,5838, -,-,-,-,-,-, 705423 Satellite W-chromosome 585 chrUn_NT_472193v1 201 2742 GGXHOI 414 + 201 2742 0 2 832,1690, 0,851, +,+, 705425 Satellite W-chromosome 585 chrUn_NT_472193v1 2841 5940 GGXHOI 440 + 2841 5940 0 4 655,744,52,1554, 0,689,1474,1545, +,+,+,+, 705426 Satellite W-chromosome 585 chrUn_NT_472194v1 3238 5405 Sat-CR1_GG 166 - 3238 5405 0 2 797,828, 0,1339, -,-, 705431 Satellite Satellite 585 chrUn_NT_472194v1 4622 6819 GGXHOI 570 - 4622 6819 0 2 1112,92, 0,2105, -,-, 705433 Satellite W-chromosome 585 chrUn_NT_472197v1 5906 6810 GGXHOI 396 - 5906 6810 0 2 353,538, 0,366, -,-, 705441 Satellite W-chromosome 585 chrUn_NT_472198v1 904 1791 CR1-B2 650 + 904 1791 0 3 53,60,60, 0,681,827, +,+,+, 705443 LINE CR1 585 chrUn_NT_472198v1 1056 1161 CR1-C4 668 + 1056 1161 0 2 54,51, 0,54, +,+, 705446 LINE CR1 585 chrUn_NT_472198v1 2235 2662 CR1-Y4 374 - 2235 2662 0 2 80,347, 0,80, -,-, 705454 LINE CR1 585 chrUn_NT_472198v1 2942 3336 CR1-Y2 558 - 2942 3336 0 3 197,123,74, 0,197,320, -,-,-, 705456 LINE CR1 585 chrUn_NT_472198v1 3310 3522 CR1-Y2 527 - 3310 3522 0 3 86,63,63, 0,86,149, -,-,-, 705457 LINE CR1 585 chrUn_NT_472198v1 3594 3995 CR1-Y2 529 - 3594 3995 0 2 160,241, 0,160, -,-, 705460 LINE CR1 585 chrUn_NT_472198v1 4711 6008 CR1-E 569 + 4711 6008 0 2 52,60, 0,1237, +,+, 705467 LINE CR1 585 chrUn_NT_472198v1 5455 5557 CR1-E 582 + 5455 5557 0 2 54,48, 0,54, +,+, 705470 LINE CR1 585 chrUn_NT_472204v1 1569 3310 GGXHOI 397 + 1569 3310 0 2 1320,401, 0,1340, +,+, 705511 Satellite W-chromosome 585 chrUn_NT_472204v1 3557 4500 GGXHOI 329 + 3557 4500 0 3 328,392,135, 0,380,808, +,+,+, 705512 Satellite W-chromosome 585 chrUn_NT_472204v1 4576 6113 GGXHOI 357 + 4576 6113 0 5 352,156,286,213,368, 0,396,566,894,1169, +,+,+,+,+, 705513 Satellite W-chromosome 585 chrUn_NT_472206v1 3960 4023 GA-rich 312 + 3960 4023 0 2 11,23, 0,40, +,+, 705536 Low_complexity Low_complexity 585 chrUn_NT_472207v1 3723 4156 (ACCCCATAGGG)n 520 - 3723 4156 0 3 151,114,119, 0,176,314, -,-,-, 705550 Satellite Satellite 585 chrUn_NT_472207v1 4263 4993 (ACCCCATAGGG)n 415 - 4263 4993 0 3 134,134,371, 0,179,359, -,-,-, 705552 Satellite Satellite 585 chrUn_NT_472207v1 5734 6016 (ACCCCATAGGG)n 356 - 5734 6016 0 2 126,128, 0,154, -,-, 705555 Satellite Satellite 585 chrUn_NT_472208v1 1128 2221 GGXHOI 389 + 1128 2221 0 2 657,392, 0,701, +,+, 705559 Satellite W-chromosome 585 chrUn_NT_472208v1 2356 4577 GGXHOI 392 + 2356 4577 0 2 405,1796, 0,425, +,+, 705560 Satellite W-chromosome 585 chrUn_NT_472208v1 5047 6807 GGXHOI 397 + 5047 6807 0 2 440,1305, 0,455, +,+, 705561 Satellite W-chromosome 585 chrUn_NT_472209v1 941 1571 G-rich 474 + 941 1571 0 2 32,545, 0,85, +,+, 705564 Low_complexity Low_complexity 585 chrUn_NT_472211v1 2518 5615 GGXHOI 386 - 2518 5615 0 2 1626,1456, 0,1641, -,-, 705574 Satellite W-chromosome 585 chrUn_NT_472211v1 5771 6740 GGXHOI 350 - 5771 6740 0 2 628,329, 0,640, -,-, 705575 Satellite W-chromosome 585 chrUn_NT_472212v1 4285 4424 GA-rich 244 + 4285 4424 0 2 43,63, 0,76, +,+, 705586 Low_complexity Low_complexity 585 chrUn_NT_472213v1 840 1461 CR1-H 674 - 840 1461 0 2 137,478, 0,143, -,-, 705593 LINE CR1 585 chrUn_NT_472213v1 4826 5283 CR1-H 677 - 4826 5283 0 2 163,294, 0,163, -,-, 705597 LINE CR1 585 chrUn_NT_472214v1 6670 6798 (CCT)n 398 + 6670 6798 0 2 94,13, 0,115, +,+, 705621 Simple_repeat Simple_repeat 585 chrUn_NT_472215v1 5083 5464 (ACCCCATAGGG)n 605 - 5083 5464 0 3 64,73,138, 0,118,243, -,-,-, 705630 Satellite Satellite 585 chrUn_NT_472215v1 5613 5980 (ACCCCATAGGG)n 505 - 5613 5980 0 3 41,136,74, 0,100,293, -,-,-, 705631 Satellite Satellite 585 chrUn_NT_472215v1 6553 6800 (ACCCCATAGGG)n 399 - 6553 6800 0 2 56,137, 0,110, -,-, 705635 Satellite Satellite 585 chrUn_NT_472216v1 720 1374 (CCTTG)n 504 + 720 1374 0 2 372,254, 0,400, +,+, 705641 Simple_repeat Simple_repeat 585 chrUn_NT_472216v1 3244 4024 (CCTTG)n 474 + 3244 4024 0 3 192,179,330, 0,254,450, +,+,+, 705649 Simple_repeat Simple_repeat 585 chrUn_NT_472216v1 4333 4760 (CCTTG)n 456 + 4333 4760 0 2 178,223, 0,204, +,+, 705650 Simple_repeat Simple_repeat 585 chrUn_NT_472218v1 989 2072 GGXHOI 558 - 989 2072 0 3 197,60,205, 0,478,878, -,-,-, 705689 Satellite W-chromosome 585 chrUn_NT_472218v1 2161 3244 GGXHOI 558 - 2161 3244 0 3 197,60,205, 0,478,878, -,-,-, 705692 Satellite W-chromosome 585 chrUn_NT_472218v1 3333 6778 GGXHOI 546 - 3333 6778 0 5 197,59,834,831,224, 0,478,877,2051,3221, -,-,-,-,-, 705695 Satellite W-chromosome 585 chrUn_NT_472219v1 1089 1849 GGXHOI 400 + 1089 1849 0 2 499,240, 0,520, +,+, 705702 Satellite W-chromosome 585 chrUn_NT_472219v1 2003 4750 GGXHOI 363 + 2003 4750 0 4 1404,873,286,133, 0,1418,2312,2614, +,+,+,+, 705703 Satellite W-chromosome 585 chrUn_NT_472219v1 5215 5763 GGXHOI 332 + 5215 5763 0 2 286,214, 0,334, +,+, 705705 Satellite W-chromosome 585 chrUn_NT_472220v1 2260 3070 GGXHOI 331 + 2260 3070 0 2 659,128, 0,682, +,+, 705709 Satellite W-chromosome 585 chrUn_NT_472220v1 3590 6796 GGXHOI 348 + 3590 6796 0 3 1946,811,374, 0,1960,2832, +,+,+, 705711 Satellite W-chromosome 585 chrUn_NT_472221v1 5695 6792 GGXHOI 404 - 5695 6792 0 2 466,613, 0,484, -,-, 705713 Satellite W-chromosome 585 chrUn_NT_472223v1 694 805 GGLTR7A 799 - 694 805 0 2 47,53, 0,58, -,-, 705717 LTR ERV1 585 chrUn_NT_472223v1 1558 6792 Z-REP 869 + 1558 6792 0 3 401,4349,408, 0,460,4826, +,+,+, 705719 Satellite macro 585 chrUn_NT_472226v1 1210 2847 GGXHOI 430 + 1210 2847 0 2 1304,311, 0,1326, +,+, 705749 Satellite W-chromosome 585 chrUn_NT_472227v1 492 3984 GGXHOI 344 - 492 3984 0 4 1453,444,1046,492, 0,1467,1939,3000, -,-,-,-, 705755 Satellite W-chromosome 585 chrUn_NT_472227v1 4117 6779 GGXHOI 341 - 4117 6779 0 3 130,2071,421, 0,155,2241, -,-,-, 705756 Satellite W-chromosome 585 chrUn_NT_472228v1 2339 6790 ENS1-LTR 770 - 2339 6790 0 5 884,2821,396,205,138, 0,884,3707,4103,4313, -,-,-,-,-, 705758 LTR ERVL 585 chrUn_NT_472229v1 2997 3504 (ACCCATAGGG)n 668 + 2997 3504 0 3 113,30,21, 0,333,486, +,+,+, 705762 Satellite Satellite 585 chrUn_NT_472229v1 3587 3812 (ACCCATAGGG)n 628 - 3587 3812 0 2 62,41, 0,184, -,-, 705767 Satellite Satellite 585 chrUn_NT_472229v1 4563 5342 (ACCCCATAGGG)n 551 - 4563 5342 0 4 115,124,137,251, 0,146,328,528, -,-,-,-, 705772 Satellite Satellite 585 chrUn_NT_472230v1 984 1344 (CGAGG)n 578 + 984 1344 0 2 112,14, 0,346, +,+, 705779 Simple_repeat Simple_repeat 585 chrUn_NT_472230v1 3498 3995 (CGAGG)n 592 + 3498 3995 0 2 266,181, 0,316, +,+, 705789 Simple_repeat Simple_repeat 585 chrUn_NT_472230v1 4095 5117 (CGAGG)n 539 + 4095 5117 0 4 178,187,393,34, 0,219,417,988, +,+,+,+, 705791 Simple_repeat Simple_repeat 585 chrUn_NT_472232v1 5837 6699 GGXHOI 380 + 5837 6699 0 2 286,561, 0,301, +,+, 705813 Satellite W-chromosome 585 chrUn_NT_472233v1 3480 4746 Sat-CR1_GG 174 - 3480 4746 0 2 426,35, 0,1231, -,-, 705817 Satellite Satellite 585 chrUn_NT_472233v1 4793 5693 GGXHOI 378 - 4793 5693 0 2 103,783, 0,117, -,-, 705819 Satellite W-chromosome 585 chrUn_NT_472237v1 468 633 (CCACT)n 482 + 468 633 0 2 38,100, 0,65, +,+, 705851 Simple_repeat Simple_repeat 585 chrUn_NT_472238v1 1110 1484 (CGAGG)n 561 + 1110 1484 0 2 179,177, 0,197, +,+, 705882 Simple_repeat Simple_repeat 585 chrUn_NT_472238v1 1799 3463 (CGAGG)n 491 + 1799 3463 0 2 622,1013, 0,651, +,+, 705885 Simple_repeat Simple_repeat 585 chrUn_NT_472238v1 5562 5961 (CGAGG)n 526 + 5562 5961 0 2 96,123, 0,276, +,+, 705889 Simple_repeat Simple_repeat 585 chrUn_NT_472239v1 5599 6774 GGXHOI 548 - 5599 6774 0 2 317,622, 0,553, -,-, 705901 Satellite W-chromosome 585 chrUn_NT_472240v1 956 3148 GGXHOI 539 - 956 3148 0 6 109,39,299,148,287,149, 0,120,611,921,1745,2043, -,-,-,-,-,-, 705905 Satellite W-chromosome 585 chrUn_NT_472240v1 3871 6770 GGXHOI 587 - 3871 6770 0 6 155,104,51,363,428,626, 0,195,507,600,1636,2273, -,-,-,-,-,-, 705909 Satellite W-chromosome 585 chrUn_NT_472241v1 4197 6753 GGXHOI 368 - 4197 6753 0 4 141,295,1725,314, 0,194,505,2242, -,-,-,-, 705914 Satellite W-chromosome 585 chrUn_NT_472242v1 3303 4679 CR1-H 658 - 3303 4679 0 2 117,1259, 0,117, -,-, 705918 LINE CR1 585 chrUn_NT_472243v1 2648 5226 GGXHOI 391 + 2648 5226 0 2 234,2331, 0,247, +,+, 705922 Satellite W-chromosome 585 chrUn_NT_472243v1 5319 6396 GGXHOI 422 + 5319 6396 0 2 562,480, 0,597, +,+, 705923 Satellite W-chromosome 585 chrUn_NT_472243v1 6474 6773 GGXHOI 295 + 6474 6773 0 2 165,123, 0,176, +,+, 705924 Satellite W-chromosome 585 chrUn_NT_472244v1 65 3882 GGXHOI 574 + 65 3882 0 2 415,1793, 0,2024, +,+, 705926 Satellite W-chromosome 585 chrUn_NT_472244v1 3924 6771 GGXHOI 480 + 3924 6771 0 5 242,392,620,436,220, 0,559,1271,2160,2627, +,+,+,+,+, 705929 Satellite W-chromosome 585 chrUn_NT_472245v1 2305 6769 GGXHOI 383 - 2305 6769 0 9 424,908,447,535,409,479,352,536,165, 0,468,1421,1883,2446,2869,3368,3742,4299, -,-,-,-,-,-,-,-,-, 705932 Satellite W-chromosome 585 chrUn_NT_472246v1 62 3276 GGXHOI 570 - 62 3276 0 2 2051,185, 0,3029, -,-, 705934 Satellite W-chromosome 585 chrUn_NT_472246v1 4601 6767 GGXHOI 574 - 4601 6767 0 4 853,17,99,92, 0,1196,1225,2074, -,-,-,-, 705939 Satellite W-chromosome 585 chrUn_NT_472248v1 4154 4440 (CCCCATTGGG)n 423 + 4154 4440 0 2 120,105, 0,181, +,+, 705954 Satellite Satellite 585 chrUn_NT_472250v1 1123 6763 GGXHOI 395 + 1123 6763 0 4 1088,3093,1192,182, 0,1128,4254,5458, +,+,+,+, 705967 Satellite W-chromosome 585 chrUn_NT_472251v1 518 1133 GGXHOI 401 + 518 1133 0 3 138,197,230, 0,149,385, +,+,+, 705969 Satellite W-chromosome 585 chrUn_NT_472251v1 2010 5501 GGXHOI 351 + 2010 5501 0 4 190,182,981,2041, 0,239,456,1450, +,+,+,+, 705973 Satellite W-chromosome 585 chrUn_NT_472251v1 5762 6735 GGXHOI 396 + 5762 6735 0 2 263,693, 0,280, +,+, 705974 Satellite W-chromosome 585 chrUn_NT_472253v1 277 1596 (CAAGG)n 600 + 277 1596 0 6 180,195,177,285,186,174, 0,215,446,659,944,1145, +,+,+,+,+,+, 705978 Simple_repeat Simple_repeat 585 chrUn_NT_472253v1 1653 2780 (CAAGG)n 594 + 1653 2780 0 5 178,184,180,206,144, 0,194,392,593,983, +,+,+,+,+, 705980 Simple_repeat Simple_repeat 585 chrUn_NT_472253v1 2852 3554 (CAAGG)n 589 + 2852 3554 0 3 220,76,193, 0,394,509, +,+,+, 705982 Simple_repeat Simple_repeat 585 chrUn_NT_472253v1 3597 4629 (CAAGG)n 586 + 3597 4629 0 3 378,176,424, 0,412,608, +,+,+, 705986 Simple_repeat Simple_repeat 585 chrUn_NT_472253v1 4652 5621 (CAAGG)n 594 + 4652 5621 0 3 354,176,377, 0,380,592, +,+,+, 705988 Simple_repeat Simple_repeat 585 chrUn_NT_472253v1 5641 6679 (CAAGG)n 645 + 5641 6679 0 5 94,84,260,216,184, 0,274,358,618,854, +,+,+,+,+, 705990 Simple_repeat Simple_repeat 585 chrUn_NT_472254v1 2002 4375 GGLTR7-int 291 - 2002 4375 0 3 797,1121,408, 0,807,1965, -,-,-, 705994 LTR ERV1 585 chrUn_NT_472264v1 1355 6507 GGXHOI 525 + 1355 6507 0 9 158,191,291,806,36,305,189,300,145, 0,596,1107,1790,2991,3493,4191,4691,5007, +,+,+,+,+,+,+,+,+, 706062 Satellite W-chromosome 585 chrUn_NT_472269v1 762 1392 (CGAGG)n 506 + 762 1392 0 2 164,282, 0,348, +,+, 706094 Simple_repeat Simple_repeat 585 chrUn_NT_472269v1 1454 2216 (CGAGG)n 535 + 1454 2216 0 3 265,79,179, 0,445,583, +,+,+, 706097 Simple_repeat Simple_repeat 585 chrUn_NT_472269v1 4676 5107 (CGAGG)n 615 + 4676 5107 0 2 179,252, 0,179, +,+, 706107 Simple_repeat Simple_repeat 585 chrUn_NT_472269v1 5209 6720 (CGAGG)n 603 + 5209 6720 0 2 797,673, 0,838, +,+, 706109 Simple_repeat Simple_repeat 585 chrUn_NT_472270v1 4661 5254 GGXHOI 353 + 4661 5254 0 2 310,268, 0,325, +,+, 706114 Satellite W-chromosome 585 chrUn_NT_472273v1 3733 4616 CR1-F0 892 - 3733 4616 0 2 136,747, 0,136, -,-, 706125 LINE CR1 585 chrUn_NT_472273v1 4769 5244 (GCCTG)n 546 + 4769 5244 0 2 110,186, 0,289, +,+, 706127 Simple_repeat Simple_repeat 585 chrUn_NT_472273v1 5486 6230 (CCTTG)n 616 + 5486 6230 0 2 422,270, 0,474, +,+, 706131 Simple_repeat Simple_repeat 585 chrUn_NT_472274v1 5253 6491 (CTCTATGGGG)n 594 + 5253 6491 0 4 184,207,541,117, 0,218,549,1121, +,+,+,+, 706138 Satellite Satellite 585 chrUn_NT_472275v1 206 594 (CAGGC)n 474 + 206 594 0 2 189,188, 0,200, +,+, 706143 Simple_repeat Simple_repeat 585 chrUn_NT_472275v1 1448 2478 (CAAGG)n 594 + 1448 2478 0 4 181,107,205,13, 0,217,636,1017, +,+,+,+, 706148 Simple_repeat Simple_repeat 585 chrUn_NT_472275v1 5077 6460 GGXHOI 387 - 5077 6460 0 4 105,519,178,486, 0,150,687,897, -,-,-,-, 706156 Satellite W-chromosome 585 chrUn_NT_472276v1 1251 1720 (CTCTATGGGG)n 445 + 1251 1720 0 2 223,212, 0,257, +,+, 706159 Satellite Satellite 585 chrUn_NT_472276v1 3595 4086 (ACCCCATAGGG)n 412 - 3595 4086 0 2 161,315, 0,176, -,-, 706171 Satellite Satellite 585 chrUn_NT_472276v1 4193 4433 (GCCCCACAGCT)n 516 + 4193 4433 0 2 130,21, 0,219, +,+, 706173 Satellite Satellite 585 chrUn_NT_472277v1 2327 3059 (GCCCCACAGCT)n 609 - 2327 3059 0 4 123,254,126,125, 0,155,460,607, -,-,-,-, 706179 Satellite Satellite 585 chrUn_NT_472277v1 3080 3335 (GCCCCACAGCT)n 558 - 3080 3335 0 2 127,117, 0,138, -,-, 706181 Satellite Satellite 585 chrUn_NT_472277v1 4754 5737 (GCCCCACAGCT)n 613 - 4754 5737 0 5 122,127,251,124,193, 0,185,332,604,790, -,-,-,-,-, 706182 Satellite Satellite 585 chrUn_NT_472278v1 5735 6709 (TTAGGG)n 503 + 5735 6709 0 4 185,193,338,186, 0,203,431,788, +,+,+,+, 706186 Simple_repeat Simple_repeat 585 chrUn_NT_472280v1 6047 6671 (TCCG)n 420 + 6047 6671 0 2 165,256, 0,368, +,+, 706199 Simple_repeat Simple_repeat 585 chrUn_NT_472281v1 566 4408 GGXHOI 393 - 566 4408 0 3 849,1171,1795, 0,863,2047, -,-,-, 706203 Satellite W-chromosome 585 chrUn_NT_472283v1 857 2922 GGXHOI 369 + 857 2922 0 2 1050,999, 0,1066, +,+, 706211 Satellite W-chromosome 585 chrUn_NT_472283v1 4109 4910 GGXHOI 295 + 4109 4910 0 2 335,449, 0,352, +,+, 706214 Satellite W-chromosome 585 chrUn_NT_472283v1 5665 6654 GGXHOI 357 + 5665 6654 0 2 384,589, 0,400, +,+, 706216 Satellite W-chromosome 585 chrUn_NT_472284v1 5873 6256 GGLTR3E1 537 + 5873 6256 0 2 303,80, 0,303, +,+, 706219 LTR ERVL 585 chrUn_NT_472286v1 1875 5585 GGXHOI 434 - 1875 5585 0 5 984,1588,64,537,474, 0,996,2604,2683,3236, -,-,-,-,-, 706230 Satellite W-chromosome 585 chrUn_NT_472287v1 3250 3395 GA-rich 278 + 3250 3395 0 2 43,50, 0,95, +,+, 706236 Low_complexity Low_complexity 585 chrUn_NT_472287v1 4723 4866 GA-rich 276 + 4723 4866 0 2 43,63, 0,80, +,+, 706238 Low_complexity Low_complexity 585 chrUn_NT_472290v1 801 5353 GGXHOI 406 - 801 5353 0 11 229,392,1010,156,314,393,802,296,222,453,131, 0,241,649,1673,1841,2167,2577,3391,3709,3952,4421, -,-,-,-,-,-,-,-,-,-,-, 706249 Satellite W-chromosome 585 chrUn_NT_472290v1 5417 6675 GGXHOI 391 - 5417 6675 0 2 306,935, 0,323, -,-, 706250 Satellite W-chromosome 585 chrUn_NT_472291v1 5376 6701 GGXHOI 422 + 5376 6701 0 3 234,952,107, 0,250,1218, +,+,+, 706254 Satellite W-chromosome 585 chrUn_NT_472294v1 1050 1628 (CGAGG)n 569 + 1050 1628 0 2 180,363, 0,215, +,+, 706266 Simple_repeat Simple_repeat 585 chrUn_NT_472294v1 2338 3364 (CGAGG)n 548 + 2338 3364 0 2 489,359, 0,667, +,+, 706271 Simple_repeat Simple_repeat 585 chrUn_NT_472294v1 3664 4224 (CGAGG)n 568 + 3664 4224 0 2 235,309, 0,251, +,+, 706275 Simple_repeat Simple_repeat 585 chrUn_NT_472294v1 4935 6011 (CGAGG)n 495 + 4935 6011 0 4 467,176,177,172, 0,515,704,904, +,+,+,+, 706280 Simple_repeat Simple_repeat 585 chrUn_NT_472295v1 792 1560 GGXHOI 456 - 792 1560 0 4 157,334,163,76, 0,169,515,692, -,-,-,-, 706285 Satellite W-chromosome 585 chrUn_NT_472296v1 1658 3823 GGERVL-A-int 690 + 1658 3823 0 3 1144,463,557, 0,1144,1608, +,+,+, 706294 LTR ERVL 585 chrUn_NT_472296v1 3809 6453 GGLTR3F1 890 + 3809 6453 0 2 2177,465, 0,2179, +,+, 706295 LTR ERVL 585 chrUn_NT_472298v1 3741 6522 GGERV28_I-int 171 + 3741 6522 0 3 130,1435,602, 0,436,2179, +,+,+, 706302 LTR ERVK 585 chrUn_NT_472302v1 1718 2743 GGXHOI 578 - 1718 2743 0 2 437,314, 0,711, -,-, 706312 Satellite W-chromosome 585 chrUn_NT_472302v1 2808 6098 GGXHOI 543 - 2808 6098 0 4 780,1212,327,488, 0,976,2412,2802, -,-,-,-, 706314 Satellite W-chromosome 585 chrUn_NT_472302v1 6165 6700 GGXHOI 502 - 6165 6700 0 2 257,224, 0,311, -,-, 706317 Satellite W-chromosome 585 chrUn_NT_472304v1 407 1060 (ACCCATAGAG)n 593 - 407 1060 0 3 116,235,251, 0,128,402, -,-,-, 706320 Satellite Satellite 585 chrUn_NT_472304v1 2139 2529 (ACCCATAGAG)n 577 - 2139 2529 0 2 121,246, 0,144, -,-, 706325 Satellite Satellite 585 chrUn_NT_472304v1 2936 3562 (ACCCATAGAG)n 435 - 2936 3562 0 4 125,130,126,125, 0,170,313,501, -,-,-,-, 706327 Satellite Satellite 585 chrUn_NT_472304v1 3784 4251 (ACCCCATAGGG)n 681 - 3784 4251 0 2 121,284, 0,183, -,-, 706328 Satellite Satellite 585 chrUn_NT_472304v1 4313 4598 (ACCCCATAGGG)n 617 - 4313 4598 0 2 130,114, 0,171, -,-, 706330 Satellite Satellite 585 chrUn_NT_472304v1 4783 5204 (CTCTATGGGG)n 533 - 4783 5204 0 2 210,186, 0,235, -,-, 706332 Satellite Satellite 585 chrUn_NT_472304v1 5123 5362 (ACCCCATAGGG)n 476 - 5123 5362 0 2 94,70, 0,169, -,-, 706333 Satellite Satellite 585 chrUn_NT_472304v1 5583 5917 (ACCCATAGAG)n 472 - 5583 5917 0 2 144,49, 0,285, -,-, 706337 Satellite Satellite 585 chrUn_NT_472304v1 6091 6340 (ACCCCATAGGG)n 452 - 6091 6340 0 2 66,31, 0,218, -,-, 706340 Satellite Satellite 585 chrUn_NT_472305v1 921 1150 (CCCCATTGGG)n 484 - 921 1150 0 2 87,29, 0,200, -,-, 706345 Satellite Satellite 585 chrUn_NT_472305v1 1152 2077 (ACCCATTGGG)n 668 - 1152 2077 0 4 365,149,278,131, 0,365,516,794, -,-,-,-, 706347 Satellite Satellite 585 chrUn_NT_472305v1 6045 6700 (ACCCCATAGGG)n 324 - 6045 6700 0 3 318,133,118, 0,361,537, -,-,-, 706362 Satellite Satellite 585 chrUn_NT_472307v1 1704 2748 GGXHOI 381 + 1704 2748 0 2 466,515, 0,529, +,+, 706376 Satellite W-chromosome 585 chrUn_NT_472307v1 4075 4901 GGXHOI 363 + 4075 4901 0 2 296,473, 0,353, +,+, 706379 Satellite W-chromosome 585 chrUn_NT_472308v1 1993 4017 CR1-C4 363 - 1993 4017 0 3 1587,270,167, 0,1587,1857, -,-,-, 706383 LINE CR1 585 chrUn_NT_472309v1 1125 2951 GGXHOI 322 + 1125 2951 0 2 1472,338, 0,1488, +,+, 706391 Satellite W-chromosome 585 chrUn_NT_472309v1 3134 4544 GGXHOI 334 + 3134 4544 0 2 584,768, 0,642, +,+, 706392 Satellite W-chromosome 585 chrUn_NT_472310v1 303 932 (CTCTATGGGG)n 596 + 303 932 0 2 170,88, 0,541, +,+, 706399 Satellite Satellite 585 chrUn_NT_472310v1 473 844 (ACCCATAGAG)n 565 + 473 844 0 2 150,221, 0,150, +,+, 706400 Satellite Satellite 585 chrUn_NT_472310v1 1839 2523 (CTCTATGGGG)n 607 + 1839 2523 0 2 196,456, 0,228, +,+, 706407 Satellite Satellite 585 chrUn_NT_472310v1 6555 6633 (G)n 883 + 6555 6633 0 2 28,20, 0,58, +,+, 706419 Simple_repeat Simple_repeat 585 chrUn_NT_472313v1 1927 2782 (CGAGG)n 516 + 1927 2782 0 3 157,487,198, 0,170,657, +,+,+, 706443 Simple_repeat Simple_repeat 585 chrUn_NT_472313v1 3116 4222 (CCTCG)n 561 + 3116 4222 0 4 236,425,207,182, 0,251,676,924, +,+,+,+, 706446 Simple_repeat Simple_repeat 585 chrUn_NT_472313v1 4244 5765 (CCTCG)n 539 + 4244 5765 0 5 87,93,427,122,224, 0,271,394,1162,1297, +,+,+,+,+, 706448 Simple_repeat Simple_repeat 585 chrUn_NT_472314v1 3518 3981 CR1-G 345 - 3518 3981 0 2 340,96, 0,367, -,-, 706458 LINE CR1 585 chrUn_NT_472315v1 4762 5004 (CTCTATGGGG)n 573 - 4762 5004 0 2 116,115, 0,127, -,-, 706462 Satellite Satellite 585 chrUn_NT_472322v1 1382 5620 GGLTR7-int 819 - 1382 5620 0 3 612,651,2924, 0,612,1314, -,-,-, 706530 LTR ERV1 585 chrUn_NT_472323v1 2349 6593 GGXHOI 385 - 2349 6593 0 6 2005,835,266,486,138,390, 0,2028,2877,3155,3654,3854, -,-,-,-,-,-, 706533 Satellite W-chromosome 585 chrUn_NT_472324v1 768 6683 Z-REP 929 - 768 6683 0 2 5626,278, 0,5637, -,-, 706535 Satellite macro 585 chrUn_NT_472325v1 64 580 (CTCTATGGGG)n 634 + 64 580 0 2 359,144, 0,372, +,+, 706537 Satellite Satellite 585 chrUn_NT_472325v1 723 1171 (CTCTATGGGG)n 499 + 723 1171 0 2 126,267, 0,181, +,+, 706538 Satellite Satellite 585 chrUn_NT_472325v1 2145 2567 (CTCTATGGGG)n 623 + 2145 2567 0 3 120,122,124, 0,141,298, +,+,+, 706545 Satellite Satellite 585 chrUn_NT_472325v1 2874 3119 (ACCCATAGAG)n 466 - 2874 3119 0 2 100,21, 0,224, -,-, 706548 Satellite Satellite 585 chrUn_NT_472325v1 3884 4179 (CTCTATGGGG)n 561 + 3884 4179 0 2 116,120, 0,175, +,+, 706555 Satellite Satellite 585 chrUn_NT_472325v1 5327 5627 (CTCTATGGGG)n 533 + 5327 5627 0 2 135,124, 0,176, +,+, 706562 Satellite Satellite 585 chrUn_NT_472327v1 4161 5205 (ACCCCATAGGG)n 650 - 4161 5205 0 4 121,235,22,113, 0,174,787,931, -,-,-,-, 706578 Satellite Satellite 585 chrUn_NT_472328v1 2331 3175 GGXHOI 298 + 2331 3175 0 2 149,680, 0,164, +,+, 706583 Satellite W-chromosome 585 chrUn_NT_472328v1 3378 6022 GGXHOI 361 + 3378 6022 0 3 688,891,1008, 0,717,1636, +,+,+, 706584 Satellite W-chromosome 585 chrUn_NT_472329v1 4242 6681 GGXHOI 464 - 4242 6681 0 4 610,1033,434,304, 0,624,1681,2135, -,-,-,-, 706587 Satellite W-chromosome 585 chrUn_NT_472330v1 946 1151 (GGAT)n 737 + 946 1151 0 2 35,120, 0,85, +,+, 706593 Simple_repeat Simple_repeat 585 chrUn_NT_472330v1 1307 1636 (TGGA)n 605 + 1307 1636 0 2 140,149, 0,180, +,+, 706595 Simple_repeat Simple_repeat 585 chrUn_NT_472331v1 762 1232 (CAT)n 218 + 762 1232 0 2 336,119, 0,351, +,+, 706601 Simple_repeat Simple_repeat 585 chrUn_NT_472331v1 4287 4923 (ACCCATAGAG)n 568 + 4287 4923 0 2 353,241, 0,395, +,+, 706610 Satellite Satellite 585 chrUn_NT_472331v1 4980 5324 (ACCCATAGAG)n 672 + 4980 5324 0 2 204,19, 0,325, +,+, 706612 Satellite Satellite 585 chrUn_NT_472335v1 1558 6550 GGXHOI 368 - 1558 6550 0 8 301,779,142,363,1027,476,148,1637, 0,316,1107,1267,1643,2684,3195,3355, -,-,-,-,-,-,-,-, 706641 Satellite W-chromosome 585 chrUn_NT_472339v1 1750 3431 GGXHOI 335 - 1750 3431 0 3 998,322,262, 0,1041,1419, -,-,-, 706656 Satellite W-chromosome 585 chrUn_NT_472339v1 3518 6628 GGXHOI 349 - 3518 6628 0 2 1423,1669, 0,1441, -,-, 706657 Satellite W-chromosome 585 chrUn_NT_472341v1 1978 2213 G-rich 410 + 1978 2213 0 2 35,142, 0,93, +,+, 706669 Low_complexity Low_complexity 585 chrUn_NT_472343v1 3602 6250 GGLTR7-int 483 + 3602 6250 0 3 119,1631,826, 0,119,1822, +,+,+, 706682 LTR ERV1 585 chrUn_NT_472345v1 2339 2824 (ACCCATAGGG)n 743 + 2339 2824 0 3 130,18,176, 0,247,309, +,+,+, 706695 Satellite Satellite 585 chrUn_NT_472345v1 3173 3861 (ACCCATAGGG)n 753 + 3173 3861 0 4 130,18,120,222, 0,247,308,466, +,+,+,+, 706700 Satellite Satellite 585 chrUn_NT_472345v1 3913 4331 (ACCCATTGGG)n 743 + 3913 4331 0 3 83,30,110, 0,220,308, +,+,+, 706702 Satellite Satellite 585 chrUn_NT_472345v1 4377 4823 (ACCCATAGGG)n 707 + 4377 4823 0 2 276,118, 0,328, +,+, 706704 Satellite Satellite 585 chrUn_NT_472345v1 4950 6013 (ACCCATAGGG)n 747 + 4950 6013 0 6 154,172,178,18,120,222, 0,154,326,621,682,841, +,+,+,+,+,+, 706706 Satellite Satellite 585 chrUn_NT_472347v1 163 2832 GGXHOI 506 - 163 2832 0 2 2476,172, 0,2497, -,-, 706737 Satellite W-chromosome 585 chrUn_NT_472347v1 4472 6663 GGXHOI 545 - 4472 6663 0 4 243,990,308,481, 0,297,1350,1710, -,-,-,-, 706740 Satellite W-chromosome 585 chrUn_NT_472348v1 4491 4946 CR1-H 685 - 4491 4946 0 2 161,294, 0,161, -,-, 706745 LINE CR1 585 chrUn_NT_472350v1 216 6652 GGXHOI 422 + 216 6652 0 5 508,929,1086,3687,97, 0,550,1495,2597,6339, +,+,+,+,+, 706772 Satellite W-chromosome 585 chrUn_NT_472351v1 2809 6652 GGXHOI 377 - 2809 6652 0 2 3149,667, 0,3176, -,-, 706774 Satellite W-chromosome 585 chrUn_NT_472352v1 4024 4645 CR1-H 670 - 4024 4645 0 2 139,476, 0,145, -,-, 706777 LINE CR1 585 chrUn_NT_472353v1 5974 6361 (CAATG)n 318 + 5974 6361 0 2 171,176, 0,211, +,+, 706791 Simple_repeat Simple_repeat 585 chrUn_NT_472354v1 658 2062 GGXHOI 402 - 658 2062 0 4 756,228,171,141, 0,771,1051,1263, -,-,-,-, 706795 Satellite W-chromosome 585 chrUn_NT_472354v1 2178 2873 GGXHOI 365 - 2178 2873 0 3 223,159,269, 0,235,426, -,-,-, 706796 Satellite W-chromosome 585 chrUn_NT_472354v1 2954 5403 GGXHOI 345 - 2954 5403 0 3 128,1545,717, 0,173,1732, -,-,-, 706797 Satellite W-chromosome 585 chrUn_NT_472355v1 3708 3961 (CCCCCA)n 84 + 3708 3961 0 2 12,142, 0,111, +,+, 706809 Simple_repeat Simple_repeat 585 chrUn_NT_472357v1 604 1741 GGXHOI 590 + 604 1741 0 3 277,341,17, 0,482,1120, +,+,+, 706819 Satellite W-chromosome 585 chrUn_NT_472357v1 1811 6029 GGXHOI 518 + 1811 6029 0 7 207,194,807,297,392,298,243, 0,600,1118,2248,2770,3455,3975, +,+,+,+,+,+,+, 706822 Satellite W-chromosome 585 chrUn_NT_472357v1 6120 6624 GGXHOI 554 + 6120 6624 0 2 179,20, 0,484, +,+, 706829 Satellite W-chromosome 585 chrUn_NT_472361v1 1051 1833 (TTAGGG)n 624 + 1051 1833 0 2 547,43, 0,739, +,+, 706882 Simple_repeat Simple_repeat 585 chrUn_NT_472361v1 2066 2601 (CCCTAA)n 580 + 2066 2601 0 2 317,82, 0,453, +,+, 706886 Simple_repeat Simple_repeat 585 chrUn_NT_472361v1 3251 4703 (CCCTAA)n 549 + 3251 4703 0 5 237,61,191,235,138, 0,444,538,734,1314, +,+,+,+,+, 706893 Simple_repeat Simple_repeat 585 chrUn_NT_472361v1 4816 5523 (CCCTAA)n 565 + 4816 5523 0 3 257,244,193, 0,257,514, +,+,+, 706898 Simple_repeat Simple_repeat 585 chrUn_NT_472362v1 1503 6642 GGERV10_LTR 747 - 1503 6642 0 2 228,4911, 0,228, -,-, 706904 LTR ERVL 585 chrUn_NT_472364v1 3046 3473 GGXHOI 310 - 3046 3473 0 2 121,290, 0,137, -,-, 706910 Satellite W-chromosome 585 chrUn_NT_472364v1 3617 6040 GGXHOI 378 - 3617 6040 0 8 128,122,236,539,353,152,130,577, 0,168,318,599,1155,1534,1705,1846, -,-,-,-,-,-,-,-, 706911 Satellite W-chromosome 585 chrUn_NT_472365v1 1756 5440 GGXHOI 528 + 1756 5440 0 4 490,151,444,585, 0,1203,1909,3099, +,+,+,+, 706917 Satellite W-chromosome 585 chrUn_NT_472366v1 4600 5872 GGXHOI 337 - 4600 5872 0 3 450,406,313, 0,506,959, -,-,-, 706926 Satellite W-chromosome 585 chrUn_NT_472368v1 1465 4170 GGXHOI 367 + 1465 4170 0 4 995,719,379,515, 0,1012,1748,2190, +,+,+,+, 706930 Satellite W-chromosome 585 chrUn_NT_472369v1 2462 3182 GGXHOI 372 - 2462 3182 0 2 391,313, 0,407, -,-, 706935 Satellite W-chromosome 585 chrUn_NT_472369v1 3775 5147 GGXHOI 339 - 3775 5147 0 3 269,370,676, 0,286,696, -,-,-, 706936 Satellite W-chromosome 585 chrUn_NT_472369v1 5858 6627 GGXHOI 375 - 5858 6627 0 2 240,514, 0,255, -,-, 706938 Satellite W-chromosome 585 chrUn_NT_472372v1 1971 4221 GGXHOI 556 - 1971 4221 0 4 33,225,831,202, 0,312,877,2048, -,-,-,-, 706956 Satellite W-chromosome 585 chrUn_NT_472372v1 4309 6552 GGXHOI 548 - 4309 6552 0 4 33,223,847,208, 0,312,851,2035, -,-,-,-, 706960 Satellite W-chromosome 585 chrUn_NT_472373v1 3590 4676 GGXHOI 508 - 3590 4676 0 2 20,851, 0,235, -,-, 706970 Satellite W-chromosome 585 chrUn_NT_472373v1 4755 5810 GGXHOI 554 - 4755 5810 0 3 131,317,213, 0,336,842, -,-,-, 706972 Satellite W-chromosome 585 chrUn_NT_472373v1 5880 6632 GGXHOI 516 - 5880 6632 0 2 450,286, 0,466, -,-, 706975 Satellite W-chromosome 585 chrUn_NT_472375v1 5608 5682 (GT)n 600 + 5608 5682 0 2 10,26, 0,48, +,+, 707007 Simple_repeat Simple_repeat 585 chrUn_NT_472376v1 2768 6628 GGXHOI 469 + 2768 6628 0 4 352,1223,773,1461, 0,369,1609,2399, +,+,+,+, 707018 Satellite W-chromosome 585 chrUn_NT_472377v1 348 714 (ACCCATAGAG)n 594 + 348 714 0 2 90,33, 0,333, +,+, 707021 Satellite Satellite 585 chrUn_NT_472377v1 986 1816 (CTCTATGGGG)n 677 - 986 1816 0 4 324,92,118,114, 0,435,586,716, -,-,-,-, 707025 Satellite Satellite 585 chrUn_NT_472377v1 2776 3485 (ACCCATAGAG)n 678 - 2776 3485 0 4 264,120,158,144, 0,283,407,565, -,-,-,-, 707031 Satellite Satellite 585 chrUn_NT_472379v1 297 1045 GGXHOI 387 + 297 1045 0 2 334,358, 0,390, +,+, 707038 Satellite W-chromosome 585 chrUn_NT_472379v1 3191 4104 GGXHOI 377 + 3191 4104 0 2 408,462, 0,451, +,+, 707042 Satellite W-chromosome 585 chrUn_NT_472379v1 4227 5020 GGXHOI 343 + 4227 5020 0 2 415,336, 0,457, +,+, 707043 Satellite W-chromosome 585 chrUn_NT_472380v1 5987 6626 GGXHOI 340 - 5987 6626 0 2 135,458, 0,181, -,-, 707052 Satellite W-chromosome 585 chrUn_NT_472381v1 3026 4945 GGXHOI 512 + 3026 4945 0 4 206,173,373,454, 0,396,893,1465, +,+,+,+, 707057 Satellite W-chromosome 585 chrUn_NT_472381v1 5022 6100 GGXHOI 492 + 5022 6100 0 4 214,19,300,122, 0,416,453,956, +,+,+,+, 707061 Satellite W-chromosome 585 chrUn_NT_472381v1 6193 6625 GGXHOI 666 + 6193 6625 0 2 91,20, 0,412, +,+, 707064 Satellite W-chromosome 585 chrUn_NT_472383v1 2785 6451 GGXHOI 379 + 2785 6451 0 7 172,511,1540,157,100,917,154, 0,186,712,2268,2460,2576,3512, +,+,+,+,+,+,+, 707072 Satellite W-chromosome 585 chrUn_NT_472384v1 3688 4984 (CGAGG)n 568 + 3688 4984 0 3 261,202,812, 0,261,484, +,+,+, 707077 Simple_repeat Simple_repeat 585 chrUn_NT_472384v1 5004 5406 (CGAGG)n 597 + 5004 5406 0 2 179,223, 0,179, +,+, 707079 Simple_repeat Simple_repeat 585 chrUn_NT_472384v1 5928 6549 (CGAGG)n 496 + 5928 6549 0 2 256,188, 0,433, +,+, 707082 Simple_repeat Simple_repeat 585 chrUn_NT_472385v1 617 3395 GGXHOI 435 - 617 3395 0 3 533,749,1456, 0,552,1322, -,-,-, 707086 Satellite W-chromosome 585 chrUn_NT_472385v1 3680 5615 GGXHOI 426 - 3680 5615 0 2 1144,775, 0,1160, -,-, 707088 Satellite W-chromosome 585 chrUn_NT_472385v1 5679 6074 GGXHOI 385 - 5679 6074 0 2 216,162, 0,233, -,-, 707089 Satellite W-chromosome 585 chrUn_NT_472385v1 6182 6619 GGXHOI 417 - 6182 6619 0 2 228,186, 0,251, -,-, 707090 Satellite W-chromosome 585 chrUn_NT_472386v1 887 1088 (GGCGA)n 362 + 887 1088 0 2 40,104, 0,97, +,+, 707093 Simple_repeat Simple_repeat 585 chrUn_NT_472386v1 1110 1489 (CGAGG)n 534 + 1110 1489 0 2 185,183, 0,196, +,+, 707095 Simple_repeat Simple_repeat 585 chrUn_NT_472386v1 4946 6360 (CGAGG)n 501 + 4946 6360 0 3 176,874,324, 0,199,1090, +,+,+, 707109 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 1640 2656 (CAAGG)n 592 + 1640 2656 0 3 149,46,277, 0,693,739, +,+,+, 707118 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 2582 2943 (CAGGC)n 476 + 2582 2943 0 2 147,35, 0,326, +,+, 707122 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 2980 3927 (CAAGG)n 533 + 2980 3927 0 3 182,366,384, 0,182,563, +,+,+, 707124 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 3770 4167 (CAGGC)n 421 + 3770 4167 0 2 179,193, 0,204, +,+, 707125 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 4090 4691 (CAAGG)n 522 + 4090 4691 0 2 349,73, 0,528, +,+, 707126 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 4674 5024 (CAGGC)n 506 + 4674 5024 0 2 120,47, 0,303, +,+, 707128 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 5047 6038 (CAAGG)n 666 + 5047 6038 0 4 182,149,212,248, 0,182,518,743, +,+,+,+, 707130 Simple_repeat Simple_repeat 585 chrUn_NT_472387v1 6103 6619 (CAAGG)n 596 + 6103 6619 0 2 143,188, 0,328, +,+, 707133 Simple_repeat Simple_repeat 585 chrUn_NT_472389v1 806 1279 (ACCCCATAGGG)n 316 + 806 1279 0 3 159,113,133, 0,174,340, +,+,+, 707142 Satellite Satellite 585 chrUn_NT_472390v1 4903 6044 CR1-B2 655 + 4903 6044 0 2 234,907, 0,234, +,+, 707151 LINE CR1 585 chrUn_NT_472391v1 5229 6001 CR1-H 744 + 5229 6001 0 2 565,156, 0,616, +,+, 707153 LINE CR1 585 chrUn_NT_472392v1 721 5459 GGXHOI 562 - 721 5459 0 4 21,83,527,786, 0,1955,2733,3952, -,-,-,-, 707158 Satellite W-chromosome 585 chrUn_NT_472392v1 5495 6618 GGXHOI 508 - 5495 6618 0 2 147,346, 0,777, -,-, 707163 Satellite W-chromosome 585 chrUn_NT_472394v1 4897 6611 GGXHOI 513 - 4897 6611 0 2 263,1416, 0,298, -,-, 707175 Satellite W-chromosome 585 chrUn_NT_472395v1 282 2698 GGXHOI 540 + 282 2698 0 4 247,194,297,511, 0,694,1211,1905, +,+,+,+, 707177 Satellite W-chromosome 585 chrUn_NT_472395v1 2789 4684 GGXHOI 536 + 2789 4684 0 3 131,926,178, 0,399,1717, +,+,+, 707181 Satellite W-chromosome 585 chrUn_NT_472395v1 5325 6598 GGXHOI 510 + 5325 6598 0 3 263,275,395, 0,585,878, +,+,+, 707187 Satellite W-chromosome 585 chrUn_NT_472396v1 5204 6595 GGXHOI 369 - 5204 6595 0 2 483,859, 0,532, -,-, 707192 Satellite W-chromosome 585 chrUn_NT_472397v1 2709 3552 GGXHOI 420 + 2709 3552 0 4 194,270,172,141, 0,208,511,702, +,+,+,+, 707196 Satellite W-chromosome 585 chrUn_NT_472397v1 4881 5523 GGXHOI 352 + 4881 5523 0 2 458,140, 0,502, +,+, 707199 Satellite W-chromosome 585 chrUn_NT_472401v1 346 1140 GGXHOI 557 + 346 1140 0 2 152,628, 0,166, +,+, 707213 Satellite W-chromosome 585 chrUn_NT_472401v1 1407 2262 GGXHOI 408 + 1407 2262 0 2 228,593, 0,262, +,+, 707214 Satellite W-chromosome 585 chrUn_NT_472401v1 2521 4471 GGXHOI 500 + 2521 4471 0 2 679,1221, 0,729, +,+, 707215 Satellite W-chromosome 585 chrUn_NT_472401v1 5972 6599 GGXHOI 541 + 5972 6599 0 2 324,241, 0,386, +,+, 707217 Satellite W-chromosome 585 chrUn_NT_472402v1 689 1218 ENS1-LTR 828 + 689 1218 0 2 323,83, 0,446, +,+, 707219 LTR ERVL 585 chrUn_NT_472402v1 1227 6523 GGXHOI 362 + 1227 6523 0 5 966,911,1518,231,1597, 0,981,1909,3453,3699, +,+,+,+,+, 707220 Satellite W-chromosome 585 chrUn_NT_472403v1 809 3174 GGXHOI 428 - 809 3174 0 9 455,336,208,199,209,370,121,145,139, 0,478,834,1053,1300,1541,1926,2064,2226, -,-,-,-,-,-,-,-,-, 707222 Satellite W-chromosome 585 chrUn_NT_472403v1 3241 4466 GGXHOI 344 - 3241 4466 0 3 659,312,187, 0,712,1038, -,-,-, 707223 Satellite W-chromosome 585 chrUn_NT_472403v1 4588 5901 GGXHOI 433 - 4588 5901 0 4 157,796,138,148, 0,173,1010,1165, -,-,-,-, 707224 Satellite W-chromosome 585 chrUn_NT_472404v1 1333 2391 GGXHOI 605 - 1333 2391 0 4 204,158,277,148, 0,223,622,910, -,-,-,-, 707229 Satellite W-chromosome 585 chrUn_NT_472404v1 3113 5484 GGXHOI 547 - 3113 5484 0 4 402,401,331,269, 0,444,1537,2102, -,-,-,-, 707232 Satellite W-chromosome 585 chrUn_NT_472404v1 5435 6333 Sat-CR1_GG 192 - 5435 6333 0 2 60,302, 0,596, -,-, 707235 Satellite Satellite 585 chrUn_NT_472405v1 1380 2645 GGXHOI 372 - 1380 2645 0 5 149,190,167,384,240, 0,168,407,590,1025, -,-,-,-,-, 707242 Satellite W-chromosome 585 chrUn_NT_472405v1 2755 4896 GGXHOI 339 - 2755 4896 0 3 159,1854,58, 0,173,2083, -,-,-, 707243 Satellite W-chromosome 585 chrUn_NT_472405v1 5020 5561 GGXHOI 297 - 5020 5561 0 2 310,182, 0,359, -,-, 707244 Satellite W-chromosome 585 chrUn_NT_472406v1 2548 3931 GGLTR7-int 305 + 2548 3931 0 3 101,285,278, 0,126,1105, +,+,+, 707249 LTR ERV1 585 chrUn_NT_472409v1 1453 2819 CR1-X 406 + 1453 2819 0 4 111,166,63,44, 0,1083,1249,1322, +,+,+,+, 707276 LINE CR1 585 chrUn_NT_472410v1 537 2156 GGXHOI 389 + 537 2156 0 2 1044,512, 0,1107, +,+, 707280 Satellite W-chromosome 585 chrUn_NT_472410v1 3315 4360 GGXHOI 386 + 3315 4360 0 2 469,514, 0,531, +,+, 707283 Satellite W-chromosome 585 chrUn_NT_472410v1 4992 5932 GGXHOI 342 + 4992 5932 0 2 298,601, 0,339, +,+, 707285 Satellite W-chromosome 585 chrUn_NT_472415v1 2769 3478 GGXHOI 391 - 2769 3478 0 3 225,270,142, 0,241,567, -,-,-, 707307 Satellite W-chromosome 585 chrUn_NT_472415v1 3924 5367 GGXHOI 387 - 3924 5367 0 3 99,862,403, 0,115,1040, -,-,-, 707309 Satellite W-chromosome 585 chrUn_NT_472417v1 120 1706 CR1-F 491 - 120 1706 0 5 198,154,202,193,202, 0,484,903,1150,1384, -,-,-,-,-, 707331 LINE CR1 585 chrUn_NT_472417v1 1748 3584 CR1-F 500 - 1748 3584 0 6 207,197,152,203,202,202, 0,250,728,1145,1390,1634, -,-,-,-,-,-, 707334 LINE CR1 585 chrUn_NT_472417v1 3627 6557 CR1-F 496 - 3627 6557 0 9 208,186,152,203,103,212,198,156,200, 0,252,708,1108,1420,1580,1832,2317,2730, -,-,-,-,-,-,-,-,-, 707337 LINE CR1 585 chrUn_NT_472422v1 2901 4020 CR1-B2 687 - 2901 4020 0 2 894,222, 0,897, -,-, 707376 LINE CR1 585 chrUn_NT_472423v1 3637 4239 CR1-H 594 + 3637 4239 0 2 461,134, 0,468, +,+, 707383 LINE CR1 585 chrUn_NT_472425v1 1687 5134 GGXHOI 375 + 1687 5134 0 3 1420,1843,115, 0,1474,3332, +,+,+, 707392 Satellite W-chromosome 585 chrUn_NT_472425v1 5256 6575 GGXHOI 396 + 5256 6575 0 4 120,699,177,237, 0,142,875,1082, +,+,+,+, 707393 Satellite W-chromosome 585 chrUn_NT_472426v1 131 705 (CAAGG)n 605 + 131 705 0 2 175,382, 0,192, +,+, 707395 Simple_repeat Simple_repeat 585 chrUn_NT_472426v1 6157 6561 G-rich 324 + 6157 6561 0 2 93,276, 0,128, +,+, 707403 Low_complexity Low_complexity 585 chrUn_NT_472429v1 2737 6572 GGXHOI 572 - 2737 6572 0 7 407,174,148,574,411,146,11, 0,785,970,1677,2810,3232,3824, -,-,-,-,-,-,-, 707415 Satellite W-chromosome 585 chrUn_NT_472430v1 2628 3904 GGXHOI 364 - 2628 3904 0 6 136,122,112,131,486,140, 0,148,316,487,633,1136, -,-,-,-,-,-, 707421 Satellite W-chromosome 585 chrUn_NT_472430v1 4556 6563 GGXHOI 455 - 4556 6563 0 4 1072,230,467,190, 0,1088,1332,1817, -,-,-,-, 707423 Satellite W-chromosome 585 chrUn_NT_472431v1 889 2107 GGXHOI 337 + 889 2107 0 3 215,303,659, 0,230,559, +,+,+, 707425 Satellite W-chromosome 585 chrUn_NT_472431v1 2225 6572 GGXHOI 390 + 2225 6572 0 2 2083,2249, 0,2098, +,+, 707426 Satellite W-chromosome 585 chrUn_NT_472432v1 2343 3111 GGXHOI 227 + 2343 3111 0 2 595,114, 0,654, +,+, 707430 Satellite W-chromosome 585 chrUn_NT_472432v1 3244 5773 GGXHOI 371 + 3244 5773 0 3 630,836,1004, 0,651,1525, +,+,+, 707431 Satellite W-chromosome 585 chrUn_NT_472434v1 2278 5433 GGERV10_LTR 914 + 2278 5433 0 2 2936,219, 0,2936, +,+, 707440 LTR ERVL 585 chrUn_NT_472437v1 4794 5050 (GCCCCACAGCT)n 287 - 4794 5050 0 2 105,140, 0,116, -,-, 707458 Satellite Satellite 585 chrUn_NT_472438v1 4310 5190 GGERVK10-int 856 + 4310 5190 0 2 364,516, 0,364, +,+, 707462 LTR ERVK 585 chrUn_NT_472439v1 1857 6562 GGXHOI 401 - 1857 6562 0 8 360,479,435,513,1457,167,551,565, 0,386,880,1336,1893,3365,3574,4140, -,-,-,-,-,-,-,-, 707464 Satellite W-chromosome 585 chrUn_NT_472440v1 2093 2406 (GCCCCACAGCT)n 468 + 2093 2406 0 2 130,130, 0,183, +,+, 707468 Satellite Satellite 585 chrUn_NT_472441v1 4095 4549 CR1-H 660 - 4095 4549 0 2 162,292, 0,162, -,-, 707476 LINE CR1 585 chrUn_NT_472444v1 2241 2380 GA-rich 238 + 2241 2380 0 2 42,64, 0,75, +,+, 707499 Low_complexity Low_complexity 585 chrUn_NT_472444v1 3741 3871 GA-rich 328 + 3741 3871 0 2 43,54, 0,76, +,+, 707502 Low_complexity Low_complexity 585 chrUn_NT_472445v1 509 878 (CAGGC)n 484 + 509 878 0 2 154,37, 0,332, +,+, 707509 Simple_repeat Simple_repeat 585 chrUn_NT_472445v1 1730 2240 (CAAGG)n 630 + 1730 2240 0 2 135,193, 0,317, +,+, 707514 Simple_repeat Simple_repeat 585 chrUn_NT_472445v1 2216 3086 (CAAGG)n 590 + 2216 3086 0 3 411,181,255, 0,434,615, +,+,+, 707517 Simple_repeat Simple_repeat 585 chrUn_NT_472445v1 4390 5086 (CAGGC)n 482 + 4390 5086 0 2 111,409, 0,287, +,+, 707524 Simple_repeat Simple_repeat 585 chrUn_NT_472447v1 570 1149 (ACCCATAGAG)n 617 + 570 1149 0 2 435,133, 0,446, +,+, 707540 Satellite Satellite 585 chrUn_NT_472447v1 1407 1681 (ACCCATAGGG)n 617 + 1407 1681 0 2 121,151, 0,123, +,+, 707542 Satellite Satellite 585 chrUn_NT_472447v1 2142 2642 (ACCCATAGAG)n 620 + 2142 2642 0 2 193,253, 0,247, +,+, 707546 Satellite Satellite 585 chrUn_NT_472447v1 2601 2913 (ACCCATAGAG)n 684 - 2601 2913 0 2 147,40, 0,272, -,-, 707547 Satellite Satellite 585 chrUn_NT_472447v1 2969 3627 (ACCCATAGAG)n 723 + 2969 3627 0 2 344,251, 0,407, +,+, 707549 Satellite Satellite 585 chrUn_NT_472449v1 1306 2188 (CTCTATGGGG)n 669 + 1306 2188 0 4 221,112,217,255, 0,238,397,627, +,+,+,+, 707573 Satellite Satellite 585 chrUn_NT_472450v1 2624 4202 GGXHOI 373 - 2624 4202 0 3 436,618,495, 0,448,1083, -,-,-, 707577 Satellite W-chromosome 585 chrUn_NT_472450v1 4610 5460 GGXHOI 359 - 4610 5460 0 2 545,289, 0,561, -,-, 707579 Satellite W-chromosome 585 chrUn_NT_472450v1 5530 6536 GGXHOI 291 - 5530 6536 0 2 615,373, 0,633, -,-, 707580 Satellite W-chromosome 585 chrUn_NT_472451v1 5947 6280 GGERV10_LTR 566 - 5947 6280 0 2 159,84, 0,249, -,-, 707583 LTR ERVL 585 chrUn_NT_472452v1 2713 6547 GGXHOI 379 - 2713 6547 0 6 896,757,662,427,764,172, 0,913,1717,2395,2882,3662, -,-,-,-,-,-, 707587 Satellite W-chromosome 585 chrUn_NT_472454v1 2880 4895 GGXHOI 413 - 2880 4895 0 3 566,725,642, 0,607,1373, -,-,-, 707596 Satellite W-chromosome 585 chrUn_NT_472457v1 723 1717 GGXHOI 399 - 723 1717 0 3 128,57,777, 0,143,217, -,-,-, 707608 Satellite W-chromosome 585 chrUn_NT_472457v1 1784 3840 GGXHOI 325 - 1784 3840 0 7 123,133,124,130,135,84,1226, 0,141,292,432,575,729,830, -,-,-,-,-,-,-, 707609 Satellite W-chromosome 585 chrUn_NT_472457v1 3928 6544 GGXHOI 406 - 3928 6544 0 6 404,138,409,282,128,1123, 0,421,572,1025,1349,1493, -,-,-,-,-,-, 707610 Satellite W-chromosome 585 chrUn_NT_472459v1 4400 4583 (GTTCTTTCC)n 896 + 4400 4583 0 2 74,52, 0,131, +,+, 707617 Simple_repeat Simple_repeat 585 chrUn_NT_472459v1 4811 5006 (GTTCTTTCC)n 930 + 4811 5006 0 2 43,96, 0,99, +,+, 707618 Simple_repeat Simple_repeat 585 chrUn_NT_472462v1 4244 6500 GGXHOI 474 + 4244 6500 0 4 277,1335,360,214, 0,307,1670,2042, +,+,+,+, 707636 Satellite W-chromosome 585 chrUn_NT_472463v1 3782 6542 GGXHOI 399 - 3782 6542 0 6 671,847,403,441,133,173, 0,699,1560,1976,2438,2587, -,-,-,-,-,-, 707639 Satellite W-chromosome 585 chrUn_NT_472465v1 861 1470 CR1-H 608 - 861 1470 0 2 137,466, 0,143, -,-, 707672 LINE CR1 585 chrUn_NT_472465v1 4128 4573 CR1-H 623 - 4128 4573 0 2 151,294, 0,151, -,-, 707676 LINE CR1 585 chrUn_NT_472466v1 3405 6526 GGXHOI 348 + 3405 6526 0 3 2238,627,139, 0,2296,2982, +,+,+, 707679 Satellite W-chromosome 585 chrUn_NT_472469v1 2713 6453 GGXHOI 403 + 2713 6453 0 4 963,473,1558,624, 0,1013,1507,3116, +,+,+,+, 707689 Satellite W-chromosome 585 chrUn_NT_472470v1 610 6535 GGXHOI 562 - 610 6535 0 4 2508,980,122,208, 0,2824,5021,5717, -,-,-,-, 707693 Satellite W-chromosome 585 chrUn_NT_472471v1 3178 6523 GGXHOI 395 + 3178 6523 0 6 1192,246,919,231,414,226, 0,1239,1500,2440,2685,3119, +,+,+,+,+,+, 707697 Satellite W-chromosome 585 chrUn_NT_472472v1 2098 6477 GGXHOI 400 - 2098 6477 0 2 3731,633, 0,3746, -,-, 707699 Satellite W-chromosome 585 chrUn_NT_472474v1 1560 3497 GGXHOI 399 - 1560 3497 0 6 211,65,303,133,246,430, 0,612,719,1039,1217,1507, -,-,-,-,-,-, 707705 Satellite W-chromosome 585 chrUn_NT_472474v1 3584 6529 GGXHOI 395 - 3584 6529 0 8 135,120,511,300,454,497,279,516, 0,147,283,815,1131,1604,2138,2429, -,-,-,-,-,-,-,-, 707706 Satellite W-chromosome 585 chrUn_NT_472476v1 3733 5238 (CGAGG)n 528 + 3733 5238 0 4 157,17,704,88, 0,336,536,1417, +,+,+,+, 707718 Simple_repeat Simple_repeat 585 chrUn_NT_472476v1 5282 6513 (CGAGG)n 506 + 5282 6513 0 2 773,433, 0,798, +,+, 707723 Simple_repeat Simple_repeat 585 chrUn_NT_472479v1 1648 2178 Sat-CR1_GG 154 - 1648 2178 0 2 106,163, 0,367, -,-, 707730 Satellite Satellite 585 chrUn_NT_472479v1 2814 3344 Sat-CR1_GG 138 + 2814 3344 0 2 165,123, 0,407, +,+, 707735 Satellite Satellite 585 chrUn_NT_472481v1 1877 2142 (CAAGG)n 668 + 1877 2142 0 2 58,184, 0,81, +,+, 707753 Simple_repeat Simple_repeat 585 chrUn_NT_472481v1 2625 3299 (CAGGC)n 503 + 2625 3299 0 3 127,84,254, 0,316,420, +,+,+, 707759 Simple_repeat Simple_repeat 585 chrUn_NT_472481v1 3698 4104 (CAAGG)n 557 + 3698 4104 0 2 182,224, 0,182, +,+, 707763 Simple_repeat Simple_repeat 585 chrUn_NT_472481v1 4232 4811 (CAAGG)n 617 + 4232 4811 0 3 187,174,27, 0,201,552, +,+,+, 707765 Simple_repeat Simple_repeat 585 chrUn_NT_472482v1 557 1814 GGXHOI 392 + 557 1814 0 3 423,128,626, 0,471,631, +,+,+, 707772 Satellite W-chromosome 585 chrUn_NT_472482v1 1907 3949 GGXHOI 422 + 1907 3949 0 2 873,1152, 0,890, +,+, 707773 Satellite W-chromosome 585 chrUn_NT_472482v1 3969 6274 GGXHOI 341 - 3969 6274 0 4 988,696,286,247, 0,1009,1719,2058, -,-,-,-, 707774 Satellite W-chromosome 585 chrUn_NT_472484v1 3173 5728 GGXHOI 562 - 3173 5728 0 4 284,69,224,490, 0,1268,1352,2065, -,-,-,-, 707785 Satellite W-chromosome 585 chrUn_NT_472485v1 2642 6519 GGXHOI 417 - 2642 6519 0 3 315,870,2625, 0,359,1252, -,-,-, 707790 Satellite W-chromosome 585 chrUn_NT_472486v1 3191 6434 GGXHOI 377 + 3191 6434 0 3 1036,1085,996, 0,1099,2247, +,+,+, 707794 Satellite W-chromosome 585 chrUn_NT_472487v1 2411 3927 GGXHOI 365 - 2411 3927 0 3 412,334,702, 0,463,814, -,-,-, 707796 Satellite W-chromosome 585 chrUn_NT_472487v1 4002 6518 GGXHOI 339 - 4002 6518 0 5 196,857,184,864,311, 0,254,1126,1323,2205, -,-,-,-,-, 707797 Satellite W-chromosome 585 chrUn_NT_472488v1 5753 6517 GGERVL-B-int 740 - 5753 6517 0 2 237,419, 0,345, -,-, 707803 LTR ERVL 585 chrUn_NT_472489v1 3878 4311 (CTCTATGGGG)n 482 + 3878 4311 0 2 88,130, 0,303, +,+, 707811 Satellite Satellite 585 chrUn_NT_472490v1 91 196 (AAGGC)n 390 + 91 196 0 2 16,51, 0,54, +,+, 707820 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 197 814 (CAAGG)n 523 + 197 814 0 3 195,201,187, 0,218,430, +,+,+, 707822 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 915 2204 (CAAGG)n 564 + 915 2204 0 2 597,507, 0,782, +,+, 707824 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 2269 2644 (CAAGG)n 636 + 2269 2644 0 2 183,179, 0,196, +,+, 707827 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 2745 3849 (CAAGG)n 647 + 2745 3849 0 5 183,130,35,143,224, 0,202,510,556,880, +,+,+,+,+, 707829 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 3867 4180 (CAGGC)n 628 + 3867 4180 0 2 103,30, 0,283, +,+, 707832 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 4182 4941 (CAAGG)n 601 + 4182 4941 0 3 288,39,257, 0,463,502, +,+,+, 707834 Simple_repeat Simple_repeat 585 chrUn_NT_472490v1 5039 6073 (CAAGG)n 624 + 5039 6073 0 4 180,214,135,307, 0,188,414,727, +,+,+,+, 707837 Simple_repeat Simple_repeat 585 chrUn_NT_472491v1 1126 1966 (CCTCG)n 507 + 1126 1966 0 2 435,405, 0,435, +,+, 707845 Simple_repeat Simple_repeat 585 chrUn_NT_472491v1 2902 3553 (CCTCG)n 593 + 2902 3553 0 3 25,210,215, 0,44,436, +,+,+, 707852 Simple_repeat Simple_repeat 585 chrUn_NT_472491v1 4700 6515 (CCTCG)n 492 + 4700 6515 0 4 875,188,479,174, 0,898,1104,1641, +,+,+,+, 707859 Simple_repeat Simple_repeat 585 chrUn_NT_472492v1 1660 2035 (ACCCCATAGGG)n 497 + 1660 2035 0 2 105,257, 0,118, +,+, 707864 Satellite Satellite 585 chrUn_NT_472492v1 3065 3512 (ACCCCATAGGG)n 519 + 3065 3512 0 2 281,133, 0,314, +,+, 707869 Satellite Satellite 585 chrUn_NT_472492v1 3721 3988 (ACCCCATAGGG)n 521 + 3721 3988 0 2 132,123, 0,144, +,+, 707870 Satellite Satellite 585 chrUn_NT_472492v1 4381 4601 (ACCCCATAGGG)n 579 + 4381 4601 0 2 71,132, 0,88, +,+, 707872 Satellite Satellite 585 chrUn_NT_472492v1 4719 4971 (ACCCCATAGGG)n 598 + 4719 4971 0 2 125,113, 0,139, +,+, 707873 Satellite Satellite 585 chrUn_NT_472492v1 5514 5808 (ACCCCATAGGG)n 559 + 5514 5808 0 2 126,130, 0,164, +,+, 707874 Satellite Satellite 585 chrUn_NT_472493v1 1951 2601 (CAGA)n 599 + 1951 2601 0 4 120,100,136,112, 0,180,340,538, +,+,+,+, 707884 Simple_repeat Simple_repeat 585 chrUn_NT_472493v1 3970 4059 (ACGG)n 336 + 3970 4059 0 2 27,20, 0,69, +,+, 707889 Simple_repeat Simple_repeat 585 chrUn_NT_472496v1 1686 2696 GGXHOI 427 + 1686 2696 0 3 211,341,136, 0,513,874, +,+,+, 707900 Satellite W-chromosome 585 chrUn_NT_472496v1 2791 3615 GGXHOI 557 + 2791 3615 0 2 616,188, 0,636, +,+, 707902 Satellite W-chromosome 585 chrUn_NT_472496v1 3660 5021 GGXHOI 570 + 3660 5021 0 2 891,130, 0,1231, +,+, 707904 Satellite W-chromosome 585 chrUn_NT_472496v1 5097 5849 GGXHOI 570 + 5097 5849 0 2 197,304, 0,448, +,+, 707906 Satellite W-chromosome 585 chrUn_NT_472497v1 264 6510 GGXHOI 353 - 264 6510 0 6 426,666,2674,395,767,1201, 0,438,1150,3841,4256,5045, -,-,-,-,-,-, 707911 Satellite W-chromosome 585 chrUn_NT_472499v1 1601 3179 GGXHOI 555 + 1601 3179 0 3 168,443,26, 0,179,1552, +,+,+, 707922 Satellite W-chromosome 585 chrUn_NT_472499v1 3961 4695 GGXHOI 506 + 3961 4695 0 3 196,18,131, 0,573,603, +,+,+, 707925 Satellite W-chromosome 585 chrUn_NT_472499v1 5812 6436 GGXHOI 588 + 5812 6436 0 2 163,21, 0,603, +,+, 707930 Satellite W-chromosome 585 chrUn_NT_472500v1 1675 6356 GGXHOI 383 - 1675 6356 0 3 2763,659,1213, 0,2779,3468, -,-,-, 707933 Satellite W-chromosome 585 chrUn_NT_472503v1 1126 3516 GGERV10_LTR 848 - 1126 3516 0 2 38,41, 0,2349, -,-, 707941 LTR ERVL 585 chrUn_NT_472503v1 1290 3474 GGLTR10D-int 925 - 1290 3474 0 2 365,1816, 0,368, -,-, 707942 LTR ERVK 585 chrUn_NT_472503v1 4084 4652 (CGAGG)n 564 + 4084 4652 0 2 185,369, 0,199, +,+, 707945 Simple_repeat Simple_repeat 585 chrUn_NT_472503v1 4768 5516 (CGAGG)n 545 + 4768 5516 0 2 554,180, 0,568, +,+, 707947 Simple_repeat Simple_repeat 585 chrUn_NT_472504v1 93 5394 GGXHOI 587 - 93 5394 0 7 785,148,462,457,455,123,247, 0,796,1613,2747,3876,4889,5054, -,-,-,-,-,-,-, 707954 Satellite W-chromosome 585 chrUn_NT_472505v1 5393 5684 CR1-X2 475 + 5393 5684 0 2 63,228, 0,63, +,+, 707965 LINE CR1 585 chrUn_NT_472506v1 652 3697 (CCTTG)n 588 + 652 3697 0 8 235,89,266,637,188,45,566,262, 0,259,693,970,1770,2141,2202,2783, +,+,+,+,+,+,+,+, 707968 Simple_repeat Simple_repeat 585 chrUn_NT_472506v1 3632 4057 (GCCTG)n 486 + 3632 4057 0 2 141,97, 0,328, +,+, 707973 Simple_repeat Simple_repeat 585 chrUn_NT_472506v1 3995 4636 (CCTTG)n 616 + 3995 4636 0 3 178,195,244, 0,178,397, +,+,+, 707975 Simple_repeat Simple_repeat 585 chrUn_NT_472506v1 5575 6494 (CCTTG)n 558 + 5575 6494 0 4 178,213,55,109, 0,178,580,810, +,+,+,+, 707979 Simple_repeat Simple_repeat 585 chrUn_NT_472507v1 2938 3560 CR1-H 685 - 2938 3560 0 2 138,478, 0,144, -,-, 707983 LINE CR1 585 chrUn_NT_472507v1 5621 6501 CR1-H 562 - 5621 6501 0 2 116,764, 0,116, -,-, 707987 LINE CR1 585 chrUn_NT_472508v1 1406 3674 GGERVL-B-int 616 - 1406 3674 0 2 495,1773, 0,495, -,-, 707990 LTR ERVL 585 chrUn_NT_472508v1 5836 6101 (CAAGG)n 686 + 5836 6101 0 2 58,204, 0,61, +,+, 707995 Simple_repeat Simple_repeat 585 chrUn_NT_472511v1 853 1236 (CCTTG)n 601 + 853 1236 0 2 182,201, 0,182, +,+, 708008 Simple_repeat Simple_repeat 585 chrUn_NT_472511v1 1172 1669 (GCCTG)n 462 + 1172 1669 0 3 79,20,37, 0,264,460, +,+,+, 708009 Simple_repeat Simple_repeat 585 chrUn_NT_472511v1 1711 3302 (CCTTG)n 651 + 1711 3302 0 3 179,584,555, 0,212,1036, +,+,+, 708012 Simple_repeat Simple_repeat 585 chrUn_NT_472511v1 3393 4144 (CCTTG)n 638 + 3393 4144 0 3 179,179,356, 0,200,395, +,+,+, 708016 Simple_repeat Simple_repeat 585 chrUn_NT_472511v1 4683 4989 (GCCTG)n 480 + 4683 4989 0 2 99,28, 0,278, +,+, 708019 Simple_repeat Simple_repeat 585 chrUn_NT_472511v1 4978 6094 (CCTTG)n 584 + 4978 6094 0 5 176,187,266,231,188, 0,199,386,686,928, +,+,+,+,+, 708021 Simple_repeat Simple_repeat 585 chrUn_NT_472513v1 3253 5792 GGXHOI 391 - 3253 5792 0 5 718,810,323,400,171, 0,755,1595,1938,2368, -,-,-,-,-, 708027 Satellite W-chromosome 585 chrUn_NT_472515v1 1608 2250 (CGAGG)n 478 + 1608 2250 0 2 167,462, 0,180, +,+, 708038 Simple_repeat Simple_repeat 585 chrUn_NT_472515v1 3277 4167 (CGAGG)n 490 + 3277 4167 0 3 182,175,480, 0,222,410, +,+,+, 708045 Simple_repeat Simple_repeat 585 chrUn_NT_472515v1 4798 6473 (CGAGG)n 503 + 4798 6473 0 3 371,526,745, 0,387,930, +,+,+, 708049 Simple_repeat Simple_repeat 585 chrUn_NT_472516v1 1130 3393 Z-REP 643 - 1130 3393 0 2 1993,256, 0,2007, -,-, 708051 Satellite macro 585 chrUn_NT_472518v1 616 6463 GGXHOI 363 - 616 6463 0 7 643,310,3516,189,555,190,267, 0,665,992,4555,4755,5370,5580, -,-,-,-,-,-,-, 708061 Satellite W-chromosome 585 chrUn_NT_472520v1 770 5908 GGXHOI 389 - 770 5908 0 3 348,1748,2993, 0,384,2145, -,-,-, 708066 Satellite W-chromosome 585 chrUn_NT_472521v1 2420 3577 (CGAGG)n 526 + 2420 3577 0 4 185,212,505,173, 0,241,466,984, +,+,+,+, 708076 Simple_repeat Simple_repeat 585 chrUn_NT_472521v1 4655 5376 (CGAGG)n 495 + 4655 5376 0 2 182,498, 0,223, +,+, 708082 Simple_repeat Simple_repeat 585 chrUn_NT_472521v1 6050 6484 (CGAGG)n 515 + 6050 6484 0 2 236,170, 0,264, +,+, 708085 Simple_repeat Simple_repeat 585 chrUn_NT_472522v1 510 1790 GGXHOI 351 - 510 1790 0 4 519,130,408,130, 0,551,693,1150, -,-,-,-, 708087 Satellite W-chromosome 585 chrUn_NT_472522v1 1904 2899 GGXHOI 369 - 1904 2899 0 4 231,398,138,130, 0,265,708,865, -,-,-,-, 708088 Satellite W-chromosome 585 chrUn_NT_472522v1 3270 3757 GGXHOI 352 - 3270 3757 0 2 97,359, 0,128, -,-, 708089 Satellite W-chromosome 585 chrUn_NT_472522v1 3837 4186 GGXHOI 317 - 3837 4186 0 2 141,191, 0,158, -,-, 708090 Satellite W-chromosome 585 chrUn_NT_472522v1 4260 4793 GGXHOI 393 - 4260 4793 0 3 235,134,132, 0,255,401, -,-,-, 708091 Satellite W-chromosome 585 chrUn_NT_472522v1 5288 6467 GGXHOI 339 - 5288 6467 0 4 133,577,127,228, 0,177,765,951, -,-,-,-, 708093 Satellite W-chromosome 585 chrUn_NT_472524v1 3134 6455 GGXHOI 389 + 3134 6455 0 5 621,1105,1137,216,107, 0,677,1808,2971,3214, +,+,+,+,+, 708104 Satellite W-chromosome 585 chrUn_NT_472525v1 669 1975 GGXHOI 355 - 669 1975 0 2 703,561, 0,745, -,-, 708106 Satellite W-chromosome 585 chrUn_NT_472525v1 3478 6482 GGXHOI 410 - 3478 6482 0 6 340,341,349,815,691,298, 0,379,739,1131,1998,2706, -,-,-,-,-,-, 708109 Satellite W-chromosome 585 chrUn_NT_472526v1 3324 3465 (AC)n 572 + 3324 3465 0 2 39,69, 0,72, +,+, 708113 Simple_repeat Simple_repeat 585 chrUn_NT_472530v1 2683 4782 GGXHOI 364 - 2683 4782 0 2 638,1445, 0,654, -,-, 708132 Satellite W-chromosome 585 chrUn_NT_472531v1 1267 1665 (TACTG)n 227 + 1267 1665 0 2 188,192, 0,206, +,+, 708137 Simple_repeat Simple_repeat 585 chrUn_NT_472532v1 1758 3171 GGXHOI 582 + 1758 3171 0 3 570,194,15, 0,893,1398, +,+,+, 708147 Satellite W-chromosome 585 chrUn_NT_472532v1 4118 5112 GGXHOI 529 + 4118 5112 0 3 434,188,140, 0,476,854, +,+,+, 708151 Satellite W-chromosome 585 chrUn_NT_472532v1 5181 6452 GGXHOI 474 + 5181 6452 0 3 174,404,343, 0,227,928, +,+,+, 708153 Satellite W-chromosome 585 chrUn_NT_472533v1 518 758 (ACCCCATAGGG)n 430 + 518 758 0 2 56,63, 0,177, +,+, 708158 Satellite Satellite 585 chrUn_NT_472535v1 440 558 (GGCGA)n 392 + 440 558 0 2 20,30, 0,88, +,+, 708177 Simple_repeat Simple_repeat 585 chrUn_NT_472535v1 562 1148 (CGAGG)n 517 + 562 1148 0 2 182,404, 0,182, +,+, 708179 Simple_repeat Simple_repeat 585 chrUn_NT_472535v1 1509 2068 (CGAGG)n 529 + 1509 2068 0 2 172,361, 0,198, +,+, 708183 Simple_repeat Simple_repeat 585 chrUn_NT_472535v1 2372 2899 (CGAGG)n 471 + 2372 2899 0 2 204,304, 0,223, +,+, 708184 Simple_repeat Simple_repeat 585 chrUn_NT_472535v1 3082 3729 (CGAGG)n 536 + 3082 3729 0 2 384,88, 0,559, +,+, 708186 Simple_repeat Simple_repeat 585 chrUn_NT_472535v1 4478 5992 (CGAGG)n 532 + 4478 5992 0 4 323,696,192,175, 0,353,1109,1339, +,+,+,+, 708192 Simple_repeat Simple_repeat 585 chrUn_NT_472535v1 6078 6465 (CGAGG)n 573 + 6078 6465 0 2 176,175, 0,212, +,+, 708194 Simple_repeat Simple_repeat 585 chrUn_NT_472538v1 2508 2694 A-rich 343 + 2508 2694 0 2 37,89, 0,97, +,+, 708209 Low_complexity Low_complexity 585 chrUn_NT_472541v1 743 2426 GGXHOI 453 + 743 2426 0 2 368,1297, 0,386, +,+, 708247 Satellite W-chromosome 585 chrUn_NT_472541v1 2444 6444 GGXHOI 517 + 2444 6444 0 4 2539,295,289,606, 0,2589,3088,3394, +,+,+,+, 708249 Satellite W-chromosome 585 chrUn_NT_472543v1 538 3393 GGXHOI 409 + 538 3393 0 6 155,847,433,630,395,283, 0,178,1051,1523,2164,2572, +,+,+,+,+,+, 708253 Satellite W-chromosome 585 chrUn_NT_472543v1 3482 6452 GGXHOI 397 + 3482 6452 0 6 479,563,220,484,641,472, 0,490,1070,1315,1810,2498, +,+,+,+,+,+, 708254 Satellite W-chromosome 585 chrUn_NT_472544v1 486 703 (CTCTATGGGG)n 450 - 486 703 0 2 80,26, 0,191, -,-, 708256 Satellite Satellite 585 chrUn_NT_472544v1 1136 2519 GGLTR7-int 307 + 1136 2519 0 3 98,260,274, 0,100,1109, +,+,+, 708258 LTR ERV1 585 chrUn_NT_472545v1 1650 3114 Sat-CR1_GG 182 - 1650 3114 0 2 609,117, 0,1347, -,-, 708265 Satellite Satellite 585 chrUn_NT_472545v1 3877 5541 GGXHOI 552 - 3877 5541 0 3 709,394,18, 0,929,1646, -,-,-, 708269 Satellite W-chromosome 585 chrUn_NT_472548v1 3048 3183 (GTTCTTTCC)n 878 + 3048 3183 0 2 40,43, 0,92, +,+, 708285 Simple_repeat Simple_repeat 585 chrUn_NT_472550v1 3641 6358 GGXHOI 399 - 3641 6358 0 3 1124,1140,413, 0,1144,2304, -,-,-, 708300 Satellite W-chromosome 585 chrUn_NT_472552v1 2894 3337 (CGAGG)n 527 + 2894 3337 0 2 241,189, 0,254, +,+, 708319 Simple_repeat Simple_repeat 585 chrUn_NT_472552v1 4894 5928 (CGAGG)n 554 + 4894 5928 0 4 180,340,183,231, 0,215,603,803, +,+,+,+, 708325 Simple_repeat Simple_repeat 585 chrUn_NT_472552v1 6060 6421 (CGAGG)n 496 + 6060 6421 0 2 166,28, 0,333, +,+, 708327 Simple_repeat Simple_repeat 585 chrUn_NT_472553v1 3205 5709 GGERVL-B-int 657 + 3205 5709 0 4 298,63,1056,739, 0,639,702,1765, +,+,+,+, 708333 LTR ERVL 585 chrUn_NT_472554v1 521 920 GGXHOI 382 - 521 920 0 2 128,216, 0,183, -,-, 708336 Satellite W-chromosome 585 chrUn_NT_472554v1 996 3178 GGXHOI 362 - 996 3178 0 4 134,379,806,793, 0,151,543,1389, -,-,-,-, 708337 Satellite W-chromosome 585 chrUn_NT_472554v1 3745 5000 GGXHOI 381 - 3745 5000 0 2 280,958, 0,297, -,-, 708339 Satellite W-chromosome 585 chrUn_NT_472554v1 5092 5578 GGXHOI 416 - 5092 5578 0 3 146,132,177, 0,163,309, -,-,-, 708340 Satellite W-chromosome 585 chrUn_NT_472554v1 5642 6450 GGXHOI 331 - 5642 6450 0 2 259,504, 0,304, -,-, 708341 Satellite W-chromosome 585 chrUn_NT_472556v1 3104 3706 (CCCCATTGGG)n 458 + 3104 3706 0 5 108,99,50,105,106, 0,109,309,372,496, +,+,+,+,+, 708357 Satellite Satellite 585 chrUn_NT_472556v1 3798 4067 (ACCCATTGGG)n 456 + 3798 4067 0 2 146,108, 0,161, +,+, 708359 Satellite Satellite 585 chrUn_NT_472556v1 4417 4821 (CCCCATTGGG)n 326 + 4417 4821 0 2 267,126, 0,278, +,+, 708361 Satellite Satellite 585 chrUn_NT_472556v1 5023 5393 (ACCCATTGGG)n 403 + 5023 5393 0 3 120,105,105, 0,139,265, +,+,+, 708363 Satellite Satellite 585 chrUn_NT_472558v1 294 1908 (CGAGG)n 488 + 294 1908 0 5 187,246,482,33,269, 0,203,631,1284,1345, +,+,+,+,+, 708374 Simple_repeat Simple_repeat 585 chrUn_NT_472558v1 2069 3815 (CGAGG)n 486 + 2069 3815 0 5 356,366,175,335,345, 0,393,802,1032,1401, +,+,+,+,+, 708378 Simple_repeat Simple_repeat 585 chrUn_NT_472558v1 5007 6320 (CGAGG)n 510 + 5007 6320 0 2 673,583, 0,730, +,+, 708385 Simple_repeat Simple_repeat 585 chrUn_NT_472559v1 4006 5856 GGXHOI 355 - 4006 5856 0 2 545,1268, 0,582, -,-, 708387 Satellite W-chromosome 585 chrUn_NT_472563v1 1957 6420 GGXHOI 439 - 1957 6420 0 5 722,50,796,1541,1217, 0,763,846,1681,3246, -,-,-,-,-, 708399 Satellite W-chromosome 585 chrUn_NT_472565v1 583 5484 GGXHOI 549 + 583 5484 0 9 692,196,259,114,599,26,84,107,403, 0,1181,1875,2447,2596,3686,4047,4147,4498, +,+,+,+,+,+,+,+,+, 708405 Satellite W-chromosome 585 chrUn_NT_472566v1 772 1169 (CGAGG)n 528 + 772 1169 0 2 177,184, 0,213, +,+, 708419 Simple_repeat Simple_repeat 585 chrUn_NT_472566v1 1241 2004 (CGAGG)n 518 + 1241 2004 0 3 179,349,178, 0,216,585, +,+,+, 708421 Simple_repeat Simple_repeat 585 chrUn_NT_472566v1 2296 3027 (CGAGG)n 509 + 2296 3027 0 2 355,340, 0,391, +,+, 708423 Simple_repeat Simple_repeat 585 chrUn_NT_472566v1 3115 4311 (CGAGG)n 456 + 3115 4311 0 4 418,174,261,86, 0,459,674,1110, +,+,+,+, 708425 Simple_repeat Simple_repeat 585 chrUn_NT_472566v1 5544 5950 (CGAGG)n 521 + 5544 5950 0 2 174,177, 0,229, +,+, 708430 Simple_repeat Simple_repeat 585 chrUn_NT_472571v1 352 2323 GGXHOI 335 + 352 2323 0 2 1244,676, 0,1295, +,+, 708447 Satellite W-chromosome 585 chrUn_NT_472571v1 2336 3331 (CCCTAA)n 582 + 2336 3331 0 4 178,182,297,108, 0,207,410,887, +,+,+,+, 708448 Simple_repeat Simple_repeat 585 chrUn_NT_472571v1 4418 5499 GGXHOI 335 + 4418 5499 0 2 913,114, 0,967, +,+, 708453 Satellite W-chromosome 585 chrUn_NT_472571v1 6024 6413 (CCCTAA)n 710 + 6024 6413 0 2 172,217, 0,172, +,+, 708456 Simple_repeat Simple_repeat 585 chrUn_NT_472574v1 570 1616 GGXHOI 322 + 570 1616 0 4 155,555,169,122, 0,171,738,924, +,+,+,+, 708472 Satellite W-chromosome 585 chrUn_NT_472574v1 2313 3316 GGXHOI 411 + 2313 3316 0 2 725,264, 0,739, +,+, 708474 Satellite W-chromosome 585 chrUn_NT_472574v1 3456 4926 GGXHOI 301 + 3456 4926 0 4 563,143,560,164, 0,578,733,1306, +,+,+,+, 708475 Satellite W-chromosome 585 chrUn_NT_472574v1 5061 5493 GGXHOI 331 + 5061 5493 0 2 281,105, 0,327, +,+, 708476 Satellite W-chromosome 585 chrUn_NT_472575v1 4425 6130 Sat-CR1_GG 162 + 4425 6130 0 2 117,966, 0,739, +,+, 708482 Satellite Satellite 585 chrUn_NT_472577v1 919 2314 GGXHOI 362 + 919 2314 0 5 166,137,381,138,462, 0,179,367,784,933, +,+,+,+,+, 708491 Satellite W-chromosome 585 chrUn_NT_472577v1 3526 4461 (TTAGGG)n 621 + 3526 4461 0 3 104,118,372, 0,416,563, +,+,+, 708497 Simple_repeat Simple_repeat 585 chrUn_NT_472577v1 5150 6136 (TTAGGG)n 634 + 5150 6136 0 2 451,274, 0,712, +,+, 708503 Simple_repeat Simple_repeat 585 chrUn_NT_472578v1 1881 3503 GGERVL-A-int 587 + 1881 3503 0 2 804,223, 0,1399, +,+, 708508 LTR ERVL 585 chrUn_NT_472578v1 3503 6397 GGLTR3G1 558 - 3503 6397 0 3 396,215,1523, 0,1156,1371, -,-,-, 708510 LTR ERVL 585 chrUn_NT_472581v1 80 670 (CCCTAA)n 597 + 80 670 0 3 186,186,177, 0,215,413, +,+,+, 708536 Simple_repeat Simple_repeat 585 chrUn_NT_472581v1 740 1466 (CCCTAA)n 584 + 740 1466 0 3 137,49,41, 0,315,685, +,+,+, 708538 Simple_repeat Simple_repeat 585 chrUn_NT_472581v1 1473 6423 GGXHOI 409 - 1473 6423 0 2 2523,2407, 0,2543, -,-, 708541 Satellite W-chromosome 585 chrUn_NT_472582v1 4333 5952 GGXHOI 376 - 4333 5952 0 2 515,1043, 0,576, -,-, 708548 Satellite W-chromosome 585 chrUn_NT_472583v1 968 1966 (CCCCATTGGG)n 511 + 968 1966 0 3 247,47,573, 0,366,425, +,+,+, 708552 Satellite Satellite 585 chrUn_NT_472584v1 1265 6420 GGXHOI 564 - 1265 6420 0 9 325,165,330,507,147,442,184,458,263, 0,364,570,1339,1857,2663,3422,4056,4892, -,-,-,-,-,-,-,-,-, 708559 Satellite W-chromosome 585 chrUn_NT_472586v1 735 2889 GGXHOI 564 - 735 2889 0 2 694,749, 0,1405, -,-, 708579 Satellite W-chromosome 585 chrUn_NT_472586v1 2932 3932 GGXHOI 532 - 2932 3932 0 2 105,548, 0,452, -,-, 708582 Satellite W-chromosome 585 chrUn_NT_472587v1 1488 2609 (CCTTG)n 539 + 1488 2609 0 3 194,203,673, 0,219,448, +,+,+, 708590 Simple_repeat Simple_repeat 585 chrUn_NT_472587v1 2629 3757 (CCTTG)n 626 + 2629 3757 0 5 103,77,326,189,209, 0,281,385,730,919, +,+,+,+,+, 708592 Simple_repeat Simple_repeat 585 chrUn_NT_472587v1 3842 5144 (CCTTG)n 658 + 3842 5144 0 5 104,77,231,198,383, 0,393,470,701,919, +,+,+,+,+, 708595 Simple_repeat Simple_repeat 585 chrUn_NT_472587v1 5394 6417 (CCTTG)n 626 + 5394 6417 0 4 394,204,140,54, 0,448,652,969, +,+,+,+, 708600 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 180 706 (CCTTG)n 514 + 180 706 0 2 108,226, 0,300, +,+, 708604 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 415 1146 (GCCTG)n 439 + 415 1146 0 3 87,273,190, 0,255,541, +,+,+, 708606 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 627 1419 (CCTTG)n 532 + 627 1419 0 2 329,280, 0,512, +,+, 708608 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 1447 1809 (CCTTG)n 589 + 1447 1809 0 2 174,188, 0,174, +,+, 708609 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 1870 2569 (CCTTG)n 621 + 1870 2569 0 3 282,31,201, 0,462,498, +,+,+, 708611 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 2624 4085 (CCTTG)n 593 + 2624 4085 0 5 268,103,93,197,363, 0,478,797,890,1098, +,+,+,+,+, 708614 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 4098 4645 (CCTTG)n 632 + 4098 4645 0 2 278,92, 0,455, +,+, 708618 Simple_repeat Simple_repeat 585 chrUn_NT_472588v1 5583 6392 (CCTTG)n 583 + 5583 6392 0 4 117,82,184,182, 0,290,427,627, +,+,+,+, 708627 Simple_repeat Simple_repeat 585 chrUn_NT_472594v1 2431 2489 (TTTG)n 458 + 2431 2489 0 2 24,10, 0,48, +,+, 708661 Simple_repeat Simple_repeat 585 chrUn_NT_472597v1 229 3410 GGXHOI 444 + 229 3410 0 5 972,271,1183,315,363, 0,993,1279,2477,2818, +,+,+,+,+, 708679 Satellite W-chromosome 585 chrUn_NT_472597v1 5312 5930 GGXHOI 343 + 5312 5930 0 3 144,151,268, 0,159,350, +,+,+, 708681 Satellite W-chromosome 585 chrUn_NT_472600v1 159 2433 GGXHOI 574 - 159 2433 0 2 1063,313, 0,1961, -,-, 708686 Satellite W-chromosome 585 chrUn_NT_472600v1 3263 6345 GGXHOI 600 - 3263 6345 0 4 247,148,453,886, 0,258,1072,2196, -,-,-,-, 708689 Satellite W-chromosome 585 chrUn_NT_472601v1 2648 6409 GGXHOI 403 - 2648 6409 0 8 356,770,172,107,602,1029,326,245, 0,414,1199,1384,1506,2126,3173,3516, -,-,-,-,-,-,-,-, 708695 Satellite W-chromosome 585 chrUn_NT_472603v1 1412 2050 (CAAGG)n 490 + 1412 2050 0 3 144,18,146, 0,297,492, +,+,+, 708711 Simple_repeat Simple_repeat 585 chrUn_NT_472603v1 2505 3078 (CCTTG)n 484 + 2505 3078 0 2 153,235, 0,338, +,+, 708716 Simple_repeat Simple_repeat 585 chrUn_NT_472603v1 3105 3459 (CAGGC)n 280 + 3105 3459 0 2 246,85, 0,269, +,+, 708718 Simple_repeat Simple_repeat 585 chrUn_NT_472603v1 3459 3873 (CAAGG)n 540 + 3459 3873 0 3 46,77,191, 0,146,223, +,+,+, 708719 Simple_repeat Simple_repeat 585 chrUn_NT_472603v1 3929 4835 (CCTTG)n 533 + 3929 4835 0 3 85,33,601, 0,268,305, +,+,+, 708721 Simple_repeat Simple_repeat 585 chrUn_NT_472605v1 1205 2486 GGXHOI 336 + 1205 2486 0 4 684,144,242,131, 0,734,894,1150, +,+,+,+, 708732 Satellite W-chromosome 585 chrUn_NT_472605v1 2585 3937 GGXHOI 329 + 2585 3937 0 8 149,151,128,135,125,133,85,220, 0,192,392,560,746,885,1031,1132, +,+,+,+,+,+,+,+, 708733 Satellite W-chromosome 585 chrUn_NT_472605v1 4385 5807 GGXHOI 381 + 4385 5807 0 4 147,244,191,711, 0,195,457,711, +,+,+,+, 708735 Satellite W-chromosome 585 chrUn_NT_472606v1 457 998 GGXHOI 458 - 457 998 0 2 16,345, 0,196, -,-, 708738 Satellite W-chromosome 585 chrUn_NT_472606v1 2727 3358 GGXHOI 389 - 2727 3358 0 2 186,400, 0,231, -,-, 708745 Satellite W-chromosome 585 chrUn_NT_472606v1 4284 5384 GGXHOI 527 - 4284 5384 0 3 485,17,148, 0,497,952, -,-,-, 708747 Satellite W-chromosome 585 chrUn_NT_472606v1 5459 6402 GGXHOI 518 - 5459 6402 0 3 33,394,50, 0,281,893, -,-,-, 708749 Satellite W-chromosome 585 chrUn_NT_472608v1 5780 6366 GGLTR7-int 346 + 5780 6366 0 3 116,38,47, 0,116,539, +,+,+, 708759 LTR ERV1 585 chrUn_NT_472610v1 6092 6360 (GCCCCACAGCT)n 533 + 6092 6360 0 2 130,127, 0,141, +,+, 708771 Satellite Satellite 585 chrUn_NT_472611v1 1748 1971 A-rich 253 + 1748 1971 0 2 60,101, 0,122, +,+, 708779 Low_complexity Low_complexity 585 chrUn_NT_472614v1 3317 3451 CR1-X1 459 - 3317 3451 0 2 67,62, 0,72, -,-, 708823 LINE CR1 585 chrUn_NT_472615v1 1349 2368 GGXHOI 415 - 1349 2368 0 2 459,508, 0,511, -,-, 708827 Satellite W-chromosome 585 chrUn_NT_472616v1 673 6365 GGXHOI 389 - 673 6365 0 7 1700,1182,347,178,473,1501,154, 0,1711,2918,3306,3501,3994,5538, -,-,-,-,-,-,-, 708832 Satellite W-chromosome 585 chrUn_NT_472617v1 521 2083 GGXHOI 403 - 521 2083 0 3 914,436,173, 0,933,1389, -,-,-, 708834 Satellite W-chromosome 585 chrUn_NT_472617v1 2809 3380 GGXHOI 422 - 2809 3380 0 2 398,153, 0,418, -,-, 708836 Satellite W-chromosome 585 chrUn_NT_472617v1 3494 5412 GGXHOI 380 - 3494 5412 0 3 883,605,360, 0,938,1558, -,-,-, 708837 Satellite W-chromosome 585 chrUn_NT_472618v1 2180 2566 (CCTTG)n 464 + 2180 2566 0 2 178,208, 0,178, +,+, 708852 Simple_repeat Simple_repeat 585 chrUn_NT_472618v1 3245 3893 (CAAGG)n 541 + 3245 3893 0 2 372,250, 0,398, +,+, 708856 Simple_repeat Simple_repeat 585 chrUn_NT_472618v1 3891 4501 (CCTTG)n 478 + 3891 4501 0 2 302,131, 0,479, +,+, 708857 Simple_repeat Simple_repeat 585 chrUn_NT_472622v1 1993 2713 (TTAGGG)n 661 + 1993 2713 0 2 178,509, 0,211, +,+, 708875 Simple_repeat Simple_repeat 585 chrUn_NT_472622v1 4326 5590 (TTAGGG)n 610 + 4326 5590 0 4 144,38,345,520, 0,324,377,744, +,+,+,+, 708878 Simple_repeat Simple_repeat 585 chrUn_NT_472626v1 756 1855 GGXHOI 568 - 756 1855 0 2 534,225, 0,874, -,-, 708896 Satellite W-chromosome 585 chrUn_NT_472626v1 1925 6380 GGXHOI 538 - 1925 6380 0 5 539,828,762,828,159, 0,877,2043,3128,4296, -,-,-,-,-, 708898 Satellite W-chromosome 585 chrUn_NT_472628v1 520 1786 CR1-H 563 - 520 1786 0 2 116,1150, 0,116, -,-, 708910 LINE CR1 585 chrUn_NT_472630v1 4700 5230 (ACCCATAGGG)n 357 - 4700 5230 0 3 186,106,149, 0,228,381, -,-,-, 708923 Satellite Satellite 585 chrUn_NT_472632v1 1453 4050 GGXHOI 362 - 1453 4050 0 2 1097,1484, 0,1113, -,-, 708934 Satellite W-chromosome 585 chrUn_NT_472632v1 4367 4956 GGXHOI 421 - 4367 4956 0 2 369,206, 0,383, -,-, 708936 Satellite W-chromosome 585 chrUn_NT_472634v1 2477 3034 (CAGTG)n 382 + 2477 3034 0 2 348,209, 0,348, +,+, 708948 Simple_repeat Simple_repeat 585 chrUn_NT_472634v1 4178 4483 (CTCTATGGGG)n 384 + 4178 4483 0 3 107,53,72, 0,119,233, +,+,+, 708950 Satellite Satellite 585 chrUn_NT_472635v1 1200 2216 GGXHOI 384 - 1200 2216 0 5 146,168,293,133,160, 0,186,380,708,856, -,-,-,-,-, 708956 Satellite W-chromosome 585 chrUn_NT_472635v1 2344 4555 GGXHOI 363 - 2344 4555 0 7 165,608,293,296,170,325,175, 0,213,875,1181,1492,1679,2036, -,-,-,-,-,-,-, 708957 Satellite W-chromosome 585 chrUn_NT_472635v1 4621 6366 GGXHOI 460 - 4621 6366 0 6 66,245,217,162,220,679, 0,80,354,596,801,1066, -,-,-,-,-,-, 708958 Satellite W-chromosome 585 chrUn_NT_472636v1 393 476 (C)n 682 + 393 476 0 2 28,28, 0,55, +,+, 708962 Simple_repeat Simple_repeat 585 chrUn_NT_472637v1 4372 5585 GGXHOI 367 + 4372 5585 0 2 886,270, 0,943, +,+, 708979 Satellite W-chromosome 585 chrUn_NT_472637v1 5682 6352 GGXHOI 305 + 5682 6352 0 2 479,175, 0,495, +,+, 708980 Satellite W-chromosome 585 chrUn_NT_472639v1 1888 3028 (TTAGGG)n 607 + 1888 3028 0 4 138,38,422,10, 0,316,369,1130, +,+,+,+, 708992 Simple_repeat Simple_repeat 585 chrUn_NT_472641v1 3039 3451 (ACCCATAGGG)n 436 - 3039 3451 0 3 110,87,115, 0,153,297, -,-,-, 709016 Satellite Satellite 585 chrUn_NT_472643v1 5038 6315 GGXHOI 423 - 5038 6315 0 2 333,884, 0,393, -,-, 709023 Satellite W-chromosome 585 chrUn_NT_472644v1 1685 4933 GGXHOI 550 + 1685 4933 0 5 298,193,328,320,889, 0,614,1144,1716,2359, +,+,+,+,+, 709028 Satellite W-chromosome 585 chrUn_NT_472644v1 5339 6149 GGXHOI 477 + 5339 6149 0 3 171,259,15, 0,219,795, +,+,+, 709034 Satellite W-chromosome 585 chrUn_NT_472645v1 4068 4237 (GTTGTTTCC)n 887 + 4068 4237 0 2 71,42, 0,127, +,+, 709048 Simple_repeat Simple_repeat 585 chrUn_NT_472647v1 1319 1391 (CCCGCGC)n 482 + 1319 1391 0 2 6,17, 0,55, +,+, 709064 Simple_repeat Simple_repeat 585 chrUn_NT_472651v1 4184 5173 GGXHOI 337 + 4184 5173 0 3 387,271,265, 0,408,724, +,+,+, 709114 Satellite W-chromosome 585 chrUn_NT_472652v1 2547 3308 GGXHOI 372 - 2547 3308 0 2 545,159, 0,602, -,-, 709120 Satellite W-chromosome 585 chrUn_NT_472652v1 3449 6347 GGXHOI 412 - 3449 6347 0 2 2032,803, 0,2095, -,-, 709121 Satellite W-chromosome 585 chrUn_NT_472655v1 721 952 (CAAGG)n 464 + 721 952 0 2 24,183, 0,48, +,+, 709149 Simple_repeat Simple_repeat 585 chrUn_NT_472655v1 1069 1718 (CCTTG)n 533 + 1069 1718 0 2 259,373, 0,276, +,+, 709151 Simple_repeat Simple_repeat 585 chrUn_NT_472655v1 2522 3631 (CAAGG)n 486 + 2522 3631 0 4 372,214,130,25, 0,372,614,1084, +,+,+,+, 709156 Simple_repeat Simple_repeat 585 chrUn_NT_472655v1 3685 4701 (CCTTG)n 472 + 3685 4701 0 3 197,539,220, 0,230,796, +,+,+, 709159 Simple_repeat Simple_repeat 585 chrUn_NT_472655v1 4773 5883 GGXHOI 371 - 4773 5883 0 2 560,487, 0,623, -,-, 709160 Satellite W-chromosome 585 chrUn_NT_472660v1 838 4396 GGXHOI 353 - 838 4396 0 6 423,529,704,271,595,871, 0,443,1013,1733,2030,2687, -,-,-,-,-,-, 709198 Satellite W-chromosome 585 chrUn_NT_472660v1 5052 5832 GGXHOI 343 - 5052 5832 0 2 225,513, 0,267, -,-, 709201 Satellite W-chromosome 585 chrUn_NT_472661v1 2199 3453 GGXHOI 386 - 2199 3453 0 4 220,111,363,444, 0,281,411,810, -,-,-,-, 709207 Satellite W-chromosome 585 chrUn_NT_472661v1 3557 5896 GGXHOI 450 - 3557 5896 0 5 113,930,289,356,515, 0,172,1119,1450,1824, -,-,-,-,-, 709208 Satellite W-chromosome 585 chrUn_NT_472661v1 5986 6334 GGXHOI 354 - 5986 6334 0 2 151,147, 0,201, -,-, 709209 Satellite W-chromosome 585 chrUn_NT_472663v1 856 2051 CR1-F2 773 + 856 2051 0 2 639,315, 0,880, +,+, 709220 LINE CR1 585 chrUn_NT_472664v1 3237 3339 (G)n 840 + 3237 3339 0 2 23,38, 0,64, +,+, 709230 Simple_repeat Simple_repeat 585 chrUn_NT_472665v1 864 1872 GGXHOI 403 - 864 1872 0 3 225,180,535, 0,259,473, -,-,-, 709234 Satellite W-chromosome 585 chrUn_NT_472665v1 1948 2821 GGXHOI 348 - 1948 2821 0 6 105,127,92,135,132,124, 0,149,290,416,565,749, -,-,-,-,-,-, 709235 Satellite W-chromosome 585 chrUn_NT_472665v1 2892 3622 GGXHOI 368 - 2892 3622 0 2 373,305, 0,425, -,-, 709236 Satellite W-chromosome 585 chrUn_NT_472665v1 3807 5404 GGXHOI 331 - 3807 5404 0 6 137,432,366,239,168,128, 0,185,630,1028,1288,1469, -,-,-,-,-,-, 709237 Satellite W-chromosome 585 chrUn_NT_472665v1 5628 6286 GGXHOI 263 - 5628 6286 0 2 476,128, 0,530, -,-, 709238 Satellite W-chromosome 585 chrUn_NT_472666v1 1914 6336 Z-REP 704 + 1914 6336 0 4 154,1962,311,1148, 0,911,2901,3274, +,+,+,+, 709242 Satellite macro 585 chrUn_NT_472667v1 601 1376 GGERVL-C-int 791 + 601 1376 0 2 647,128, 0,647, +,+, 709246 LTR ERVL 585 chrUn_NT_472667v1 5466 5636 CR1-C4 512 + 5466 5636 0 2 92,46, 0,124, +,+, 709249 LINE CR1 585 chrUn_NT_472668v1 1901 3470 GGXHOI 390 + 1901 3470 0 2 780,743, 0,826, +,+, 709253 Satellite W-chromosome 585 chrUn_NT_472668v1 3880 4409 GGXHOI 320 + 3880 4409 0 2 371,139, 0,390, +,+, 709254 Satellite W-chromosome 585 chrUn_NT_472668v1 5349 6332 GGXHOI 369 + 5349 6332 0 3 191,454,284, 0,228,699, +,+,+, 709258 Satellite W-chromosome 585 chrUn_NT_472669v1 904 2208 GGXHOI 202 - 904 2208 0 3 982,144,130, 0,996,1174, -,-,-, 709260 Satellite W-chromosome 585 chrUn_NT_472669v1 2348 3178 GGXHOI 316 - 2348 3178 0 2 580,203, 0,627, -,-, 709261 Satellite W-chromosome 585 chrUn_NT_472669v1 3639 4787 GGXHOI 362 - 3639 4787 0 4 134,123,668,139, 0,154,292,1009, -,-,-,-, 709263 Satellite W-chromosome 585 chrUn_NT_472669v1 4869 5256 GGXHOI 305 - 4869 5256 0 2 204,143, 0,244, -,-, 709264 Satellite W-chromosome 585 chrUn_NT_472669v1 5532 6334 GGXHOI 386 - 5532 6334 0 3 329,93,353, 0,342,449, -,-,-, 709265 Satellite W-chromosome 585 chrUn_NT_472670v1 893 3677 GGXHOI 424 - 893 3677 0 4 1705,408,250,339, 0,1731,2184,2445, -,-,-,-, 709267 Satellite W-chromosome 585 chrUn_NT_472670v1 3766 6221 GGXHOI 451 - 3766 6221 0 3 274,1410,740, 0,294,1715, -,-,-, 709268 Satellite W-chromosome 585 chrUn_NT_472672v1 5421 5531 GA-rich 429 + 5421 5531 0 2 37,54, 0,56, +,+, 709278 Low_complexity Low_complexity 585 chrUn_NT_472675v1 2204 4986 GGXHOI 581 - 2204 4986 0 5 247,148,44,360,582, 0,258,1086,1171,2200, -,-,-,-,-, 709292 Satellite W-chromosome 585 chrUn_NT_472675v1 5638 6326 GGXHOI 578 - 5638 6326 0 2 106,80, 0,608, -,-, 709297 Satellite W-chromosome 585 chrUn_NT_472676v1 319 2311 GGXHOI 345 + 319 2311 0 7 122,386,130,123,169,187,634, 0,174,601,772,936,1133,1358, +,+,+,+,+,+,+, 709300 Satellite W-chromosome 585 chrUn_NT_472676v1 3732 6314 GGXHOI 401 + 3732 6314 0 11 176,138,123,94,173,142,629,138,322,220,164, 0,188,343,504,647,834,990,1635,1821,2159,2418, +,+,+,+,+,+,+,+,+,+,+, 709303 Satellite W-chromosome 585 chrUn_NT_472678v1 1430 1809 CR1-F 720 + 1430 1809 0 2 173,157, 0,222, +,+, 709308 LINE CR1 585 chrUn_NT_472678v1 1854 2755 CR1-F 529 + 1854 2755 0 4 190,204,201,180, 0,232,478,721, +,+,+,+, 709309 LINE CR1 585 chrUn_NT_472678v1 2798 5794 CR1-F 581 + 2798 5794 0 9 176,188,199,203,204,204,154,198,180, 0,221,449,941,1186,1432,1903,2347,2816, +,+,+,+,+,+,+,+,+, 709310 LINE CR1 585 chrUn_NT_472678v1 5838 6249 CR1-F 723 + 5838 6249 0 2 177,189, 0,222, +,+, 709315 LINE CR1 585 chrUn_NT_472681v1 3298 3438 GA-rich 246 + 3298 3438 0 2 43,64, 0,76, +,+, 709323 Low_complexity Low_complexity 585 chrUn_NT_472684v1 2588 4687 GGXHOI 368 - 2588 4687 0 7 345,130,460,136,145,506,168, 0,385,529,1004,1184,1375,1931, -,-,-,-,-,-,-, 709333 Satellite W-chromosome 585 chrUn_NT_472684v1 4758 6318 GGXHOI 375 - 4758 6318 0 4 131,629,521,133, 0,190,858,1427, -,-,-,-, 709334 Satellite W-chromosome 585 chrUn_NT_472685v1 866 1141 (ACCCCATAGGG)n 326 - 866 1141 0 2 110,116, 0,159, -,-, 709341 Satellite Satellite 585 chrUn_NT_472685v1 2035 2612 (ACCCCATAGGG)n 353 - 2035 2612 0 3 144,248,111, 0,191,466, -,-,-, 709346 Satellite Satellite 585 chrUn_NT_472685v1 4710 5257 (AAGTG)n 586 + 4710 5257 0 2 262,90, 0,457, +,+, 709349 Simple_repeat Simple_repeat 585 chrUn_NT_472686v1 2563 5512 GGXHOI 408 - 2563 5512 0 4 647,1065,859,333, 0,662,1742,2616, -,-,-,-, 709353 Satellite W-chromosome 585 chrUn_NT_472686v1 5596 6315 GGXHOI 441 - 5596 6315 0 2 638,68, 0,651, -,-, 709354 Satellite W-chromosome 585 chrUn_NT_472687v1 5408 6186 CR1-E 505 + 5408 6186 0 2 180,53, 0,725, +,+, 709357 LINE CR1 585 chrUn_NT_472688v1 4412 4514 (G)n 915 + 4412 4514 0 2 25,17, 0,85, +,+, 709363 Simple_repeat Simple_repeat 585 chrUn_NT_472689v1 4336 4645 (ACCCCATAGGG)n 460 + 4336 4645 0 2 120,129, 0,180, +,+, 709372 Satellite Satellite 585 chrUn_NT_472689v1 5049 5573 (CTCTATGGGG)n 406 - 5049 5573 0 4 60,13,39,161, 0,180,311,363, -,-,-,-, 709375 Satellite Satellite 585 chrUn_NT_472689v1 5573 5975 (ACCCCATAGGG)n 449 + 5573 5975 0 2 210,181, 0,221, +,+, 709378 Satellite Satellite 585 chrUn_NT_472692v1 888 1339 (ACCCCATAGGG)n 555 + 888 1339 0 3 136,136,136, 0,153,315, +,+,+, 709409 Satellite Satellite 585 chrUn_NT_472692v1 1413 2017 (ACCCCATAGGG)n 572 + 1413 2017 0 4 138,122,134,131, 0,163,311,473, +,+,+,+, 709410 Satellite Satellite 585 chrUn_NT_472692v1 2742 2985 (ACCCCATAGGG)n 506 + 2742 2985 0 2 101,104, 0,139, +,+, 709413 Satellite Satellite 585 chrUn_NT_472692v1 4907 5208 (ACCCCATAGGG)n 453 - 4907 5208 0 2 120,119, 0,182, -,-, 709415 Satellite Satellite 585 chrUn_NT_472693v1 6110 6240 (CCTC)n 396 + 6110 6240 0 2 17,21, 0,109, +,+, 709439 Simple_repeat Simple_repeat 585 chrUn_NT_472698v1 3558 4505 (ACCCATAGGG)n 522 + 3558 4505 0 5 235,117,117,238,127, 0,278,430,558,820, +,+,+,+,+, 709485 Satellite Satellite 585 chrUn_NT_472698v1 5450 5883 (ACCCATAGAG)n 665 + 5450 5883 0 2 154,269, 0,164, +,+, 709492 Satellite Satellite 585 chrUn_NT_472699v1 684 1082 (CAT)n 646 + 684 1082 0 2 182,182, 0,216, +,+, 709498 Simple_repeat Simple_repeat 585 chrUn_NT_472700v1 2349 4951 GGXHOI 364 - 2349 4951 0 3 795,738,970, 0,838,1632, -,-,-, 709506 Satellite W-chromosome 585 chrUn_NT_472701v1 2804 6252 GGXHOI 388 - 2804 6252 0 4 307,488,370,2217, 0,328,845,1231, -,-,-,-, 709513 Satellite W-chromosome 585 chrUn_NT_472702v1 382 590 (ACCCCATAGGG)n 314 - 382 590 0 2 114,34, 0,174, -,-, 709517 Satellite Satellite 585 chrUn_NT_472702v1 965 1353 (CTCTATGGGG)n 522 - 965 1353 0 3 116,110,114, 0,145,274, -,-,-, 709520 Satellite Satellite 585 chrUn_NT_472703v1 68 1027 GGXHOI 552 - 68 1027 0 2 359,280, 0,679, -,-, 709526 Satellite W-chromosome 585 chrUn_NT_472703v1 1100 6294 GGXHOI 540 - 1100 6294 0 9 542,302,149,247,110,435,186,197,311, 0,935,1548,2060,2631,2998,3756,4363,4883, -,-,-,-,-,-,-,-,-, 709528 Satellite W-chromosome 585 chrUn_NT_472704v1 3244 3850 GGXHOI 321 + 3244 3850 0 2 460,130, 0,476, +,+, 709542 Satellite W-chromosome 585 chrUn_NT_472704v1 4772 5725 GGXHOI 343 + 4772 5725 0 3 439,125,306, 0,495,647, +,+,+, 709544 Satellite W-chromosome 585 chrUn_NT_472711v1 1144 4629 GGXHOI 541 + 1144 4629 0 6 806,257,195,468,164,17, 0,1087,1791,2306,2826,3468, +,+,+,+,+,+, 709583 Satellite W-chromosome 585 chrUn_NT_472711v1 4846 6285 GGXHOI 546 + 4846 6285 0 4 132,143,558,303, 0,150,304,1136, +,+,+,+, 709588 Satellite W-chromosome 585 chrUn_NT_472714v1 2768 3159 (CGAGG)n 460 + 2768 3159 0 2 166,189, 0,202, +,+, 709619 Simple_repeat Simple_repeat 585 chrUn_NT_472714v1 4461 5209 (CGAGG)n 528 + 4461 5209 0 3 185,324,173, 0,202,575, +,+,+, 709626 Simple_repeat Simple_repeat 585 chrUn_NT_472714v1 5479 6132 (CGAGG)n 495 + 5479 6132 0 3 130,299,183, 0,141,470, +,+,+, 709630 Simple_repeat Simple_repeat 585 chrUn_NT_472715v1 1874 3585 GGXHOI 356 + 1874 3585 0 3 583,243,778, 0,638,933, +,+,+, 709635 Satellite W-chromosome 585 chrUn_NT_472715v1 3716 4516 GGXHOI 343 + 3716 4516 0 2 525,261, 0,539, +,+, 709636 Satellite W-chromosome 585 chrUn_NT_472715v1 4588 6282 GGXHOI 345 + 4588 6282 0 3 144,255,1218, 0,192,476, +,+,+, 709637 Satellite W-chromosome 585 chrUn_NT_472717v1 583 1867 GGXHOI 388 + 583 1867 0 2 550,676, 0,608, +,+, 709666 Satellite W-chromosome 585 chrUn_NT_472719v1 2221 2363 GA-rich 250 + 2221 2363 0 2 43,63, 0,79, +,+, 709676 Low_complexity Low_complexity 585 chrUn_NT_472719v1 5345 5487 GA-rich 298 + 5345 5487 0 2 43,65, 0,77, +,+, 709682 Low_complexity Low_complexity 585 chrUn_NT_472720v1 1032 1583 (CTCTATGGGG)n 608 - 1032 1583 0 2 147,246, 0,305, -,-, 709687 Satellite Satellite 585 chrUn_NT_472720v1 1179 1601 (ACCCATAGAG)n 536 - 1179 1601 0 2 158,264, 0,158, -,-, 709688 Satellite Satellite 585 chrUn_NT_472720v1 1613 2133 (CTCTATGGGG)n 544 + 1613 2133 0 3 129,109,112, 0,169,408, +,+,+, 709689 Satellite Satellite 585 chrUn_NT_472720v1 2144 2949 (CTCTATGGGG)n 471 + 2144 2949 0 3 130,460,152, 0,174,653, +,+,+, 709692 Satellite Satellite 585 chrUn_NT_472720v1 3352 4307 (CTCTATGGGG)n 607 + 3352 4307 0 5 114,189,114,131,262, 0,157,381,530,693, +,+,+,+,+, 709696 Satellite Satellite 585 chrUn_NT_472720v1 4744 5002 (ACCCATAGAG)n 530 - 4744 5002 0 2 98,33, 0,225, -,-, 709701 Satellite Satellite 585 chrUn_NT_472720v1 5139 5668 (CTCTATGGGG)n 571 + 5139 5668 0 3 128,138,116, 0,191,413, +,+,+, 709704 Satellite Satellite 585 chrUn_NT_472721v1 1694 3210 GGXHOI 398 + 1694 3210 0 2 1243,233, 0,1283, +,+, 709712 Satellite W-chromosome 585 chrUn_NT_472721v1 4160 6279 GGXHOI 411 + 4160 6279 0 3 494,871,690, 0,537,1429, +,+,+, 709715 Satellite W-chromosome 585 chrUn_NT_472722v1 2076 2997 GGXHOI 384 - 2076 2997 0 2 468,434, 0,487, -,-, 709717 Satellite W-chromosome 585 chrUn_NT_472722v1 3082 5307 GGXHOI 396 - 3082 5307 0 4 398,304,549,879, 0,438,762,1346, -,-,-,-, 709718 Satellite W-chromosome 585 chrUn_NT_472723v1 1333 3123 GGXHOI 323 - 1333 3123 0 2 564,1209, 0,581, -,-, 709722 Satellite W-chromosome 585 chrUn_NT_472723v1 3208 4596 GGXHOI 361 - 3208 4596 0 2 119,1217, 0,171, -,-, 709723 Satellite W-chromosome 585 chrUn_NT_472727v1 1093 3551 GGLTR7-int 610 + 1093 3551 0 2 338,793, 0,1665, +,+, 709740 LTR ERV1 585 chrUn_NT_472727v1 3563 5985 GGERV10_LTR 874 - 3563 5985 0 2 38,41, 0,2381, -,-, 709743 LTR ERVL 585 chrUn_NT_472727v1 3728 5943 GGLTR10D-int 950 - 3728 5943 0 2 364,1848, 0,367, -,-, 709744 LTR ERVK 585 chrUn_NT_472729v1 1206 1734 Sat-CR1_GG 180 - 1206 1734 0 2 123,164, 0,364, -,-, 709750 Satellite Satellite 585 chrUn_NT_472731v1 4951 5856 (ACCCATAGAG)n 720 + 4951 5856 0 3 136,52,70, 0,585,835, +,+,+, 709771 Satellite Satellite 585 chrUn_NT_472731v1 5087 5536 (ACCCATAGGG)n 632 + 5087 5536 0 2 266,39, 0,410, +,+, 709772 Satellite Satellite 585 chrUn_NT_472732v1 527 985 (ACCCCATAGGG)n 379 + 527 985 0 3 113,133,118, 0,147,340, +,+,+, 709779 Satellite Satellite 585 chrUn_NT_472736v1 3362 3808 GGXHOI 428 + 3362 3808 0 2 332,64, 0,382, +,+, 709809 Satellite W-chromosome 585 chrUn_NT_472737v1 4326 5446 CR1-B2 699 - 4326 5446 0 2 891,226, 0,894, -,-, 709817 LINE CR1 585 chrUn_NT_472738v1 870 3419 GGXHOI 387 - 870 3419 0 4 288,1204,645,327, 0,335,1560,2222, -,-,-,-, 709819 Satellite W-chromosome 585 chrUn_NT_472738v1 3499 4485 GGXHOI 387 - 3499 4485 0 2 638,333, 0,653, -,-, 709820 Satellite W-chromosome 585 chrUn_NT_472738v1 4570 6250 GGXHOI 427 - 4570 6250 0 3 487,146,1023, 0,500,657, -,-,-, 709821 Satellite W-chromosome 585 chrUn_NT_472739v1 333 2190 (CAAGG)n 573 + 333 2190 0 6 134,33,285,61,188,212, 0,655,738,1384,1457,1645, +,+,+,+,+,+, 709824 Simple_repeat Simple_repeat 585 chrUn_NT_472739v1 3557 4149 (CAAGG)n 652 + 3557 4149 0 2 370,222, 0,370, +,+, 709833 Simple_repeat Simple_repeat 585 chrUn_NT_472739v1 4982 5364 (CAAGG)n 652 + 4982 5364 0 2 113,95, 0,287, +,+, 709839 Simple_repeat Simple_repeat 585 chrUn_NT_472739v1 5389 6165 (CAAGG)n 617 + 5389 6165 0 3 362,200,214, 0,362,562, +,+,+, 709842 Simple_repeat Simple_repeat 585 chrUn_NT_472740v1 4732 6159 (CGAGG)n 515 + 4732 6159 0 2 769,614, 0,813, +,+, 709860 Simple_repeat Simple_repeat 585 chrUn_NT_472743v1 4878 6260 GGLTR10C1 889 + 4878 6260 0 2 359,983, 0,399, +,+, 709897 LTR ERVK 585 chrUn_NT_472744v1 2130 6260 GGXHOI 407 - 2130 6260 0 3 911,1647,1503, 0,953,2627, -,-,-, 709900 Satellite W-chromosome 585 chrUn_NT_472749v1 390 753 (GCCCCACAGCT)n 506 + 390 753 0 2 75,224, 0,139, +,+, 709920 Satellite Satellite 585 chrUn_NT_472749v1 764 1115 (GCCCCACAGCT)n 593 + 764 1115 0 2 110,238, 0,113, +,+, 709922 Satellite Satellite 585 chrUn_NT_472749v1 1717 1990 (ACCCCATAGGG)n 503 + 1717 1990 0 2 122,129, 0,144, +,+, 709924 Satellite Satellite 585 chrUn_NT_472750v1 1390 2264 GGXHOI 363 + 1390 2264 0 3 279,158,373, 0,330,501, +,+,+, 709930 Satellite W-chromosome 585 chrUn_NT_472750v1 2347 3726 GGXHOI 389 + 2347 3726 0 6 111,133,128,240,279,298, 0,130,309,483,771,1081, +,+,+,+,+,+, 709931 Satellite W-chromosome 585 chrUn_NT_472750v1 5047 6256 GGXHOI 377 + 5047 6256 0 6 127,157,254,134,144,218, 0,173,373,645,817,991, +,+,+,+,+,+, 709934 Satellite W-chromosome 585 chrUn_NT_472751v1 1880 3138 GGXHOI 459 + 1880 3138 0 3 720,360,147, 0,732,1111, +,+,+, 709936 Satellite W-chromosome 585 chrUn_NT_472751v1 4169 6199 GGXHOI 416 + 4169 6199 0 6 149,275,761,144,157,351, 0,168,460,1280,1477,1679, +,+,+,+,+,+, 709939 Satellite W-chromosome 585 chrUn_NT_472752v1 714 4752 GGXHOI 405 - 714 4752 0 3 2021,738,1244, 0,2033,2794, -,-,-, 709941 Satellite W-chromosome 585 chrUn_NT_472752v1 4851 6163 GGXHOI 363 - 4851 6163 0 2 670,629, 0,683, -,-, 709942 Satellite W-chromosome 585 chrUn_NT_472755v1 2395 2504 (TTTGC)n 326 + 2395 2504 0 2 52,8, 0,101, +,+, 709955 Simple_repeat Simple_repeat 585 chrUn_NT_472756v1 33 1273 GGXHOI 490 + 33 1273 0 2 942,48, 0,1192, +,+, 709961 Satellite W-chromosome 585 chrUn_NT_472756v1 1328 5797 Sat-CR1_GG 166 + 1328 5797 0 2 20,809, 0,3660, +,+, 709963 Satellite Satellite 585 chrUn_NT_472757v1 1681 2031 (CATTG)n 320 + 1681 2031 0 2 206,130, 0,220, +,+, 709970 Simple_repeat Simple_repeat 585 chrUn_NT_472757v1 2057 2262 (CATTG)n 284 + 2057 2262 0 2 27,166, 0,39, +,+, 709972 Simple_repeat Simple_repeat 585 chrUn_NT_472757v1 3298 3977 (CATTG)n 265 + 3298 3977 0 3 209,191,212, 0,243,467, +,+,+, 709978 Simple_repeat Simple_repeat 585 chrUn_NT_472757v1 4066 4453 (CATTG)n 247 + 4066 4453 0 2 202,174, 0,213, +,+, 709979 Simple_repeat Simple_repeat 585 chrUn_NT_472757v1 4623 4895 (CATTG)n 333 + 4623 4895 0 2 49,212, 0,60, +,+, 709980 Simple_repeat Simple_repeat 585 chrUn_NT_472759v1 1227 2468 GGXHOI 459 + 1227 2468 0 2 579,644, 0,597, +,+, 709991 Satellite W-chromosome 585 chrUn_NT_472759v1 2799 4706 GGXHOI 443 + 2799 4706 0 2 623,1268, 0,639, +,+, 709992 Satellite W-chromosome 585 chrUn_NT_472759v1 4889 6119 GGXHOI 420 + 4889 6119 0 2 968,246, 0,984, +,+, 709993 Satellite W-chromosome 585 chrUn_NT_472760v1 114 657 (CCCTAA)n 566 + 114 657 0 2 283,81, 0,462, +,+, 709995 Simple_repeat Simple_repeat 585 chrUn_NT_472760v1 913 3430 GGXHOI 407 - 913 3430 0 5 432,925,258,591,220, 0,446,1421,1690,2297, -,-,-,-,-, 710000 Satellite W-chromosome 585 chrUn_NT_472760v1 4236 5752 GGXHOI 396 - 4236 5752 0 5 288,444,168,137,334, 0,335,814,997,1182, -,-,-,-,-, 710002 Satellite W-chromosome 585 chrUn_NT_472762v1 1452 6237 GGXHOI 368 - 1452 6237 0 7 733,940,670,643,746,626,308, 0,756,1713,2406,3072,3834,4477, -,-,-,-,-,-,-, 710012 Satellite W-chromosome 585 chrUn_NT_472764v1 710 3557 GGERVL-B-int 648 + 710 3557 0 2 1953,894, 0,1953, +,+, 710024 LTR ERVL 585 chrUn_NT_472764v1 4289 5608 GGLTR7-int 327 + 4289 5608 0 3 103,247,282, 0,115,1037, +,+,+, 710026 LTR ERV1 585 chrUn_NT_472770v1 4954 6236 GGLTR7-int 621 - 4954 6236 0 3 35,50,570, 0,35,712, -,-,-, 710046 LTR ERV1 585 chrUn_NT_472773v1 2276 4028 GGXHOI 373 + 2276 4028 0 2 713,980, 0,772, +,+, 710070 Satellite W-chromosome 585 chrUn_NT_472773v1 4795 6211 GGXHOI 368 + 4795 6211 0 3 446,704,187, 0,493,1229, +,+,+, 710071 Satellite W-chromosome 585 chrUn_NT_472774v1 1455 6228 GGXHOI 581 - 1455 6228 0 7 1275,444,414,146,407,25,53, 0,1832,2955,3380,4082,4506,4720, -,-,-,-,-,-,-, 710075 Satellite W-chromosome 585 chrUn_NT_472775v1 612 3851 GGERV10_LTR 873 + 612 3851 0 2 3021,217, 0,3022, +,+, 710081 LTR ERVL 585 chrUn_NT_472777v1 3098 3702 CR1-X 444 + 3098 3702 0 4 51,163,130,219, 0,51,214,385, +,+,+,+, 710091 LINE CR1 585 chrUn_NT_472778v1 611 3444 GGXHOI 411 + 611 3444 0 4 761,412,945,668, 0,778,1206,2165, +,+,+,+, 710096 Satellite W-chromosome 585 chrUn_NT_472778v1 3569 5642 GGXHOI 365 + 3569 5642 0 4 620,828,133,408, 0,641,1520,1665, +,+,+,+, 710097 Satellite W-chromosome 585 chrUn_NT_472779v1 111 756 (GCCTG)n 510 + 111 756 0 3 105,39,176, 0,252,469, +,+,+, 710101 Simple_repeat Simple_repeat 585 chrUn_NT_472779v1 859 1195 (CCTTG)n 610 + 859 1195 0 2 143,15, 0,321, +,+, 710105 Simple_repeat Simple_repeat 585 chrUn_NT_472779v1 2022 3125 CR1-F2 819 + 2022 3125 0 2 640,386, 0,717, +,+, 710109 LINE CR1 585 chrUn_NT_472780v1 3022 6187 GGXHOI 563 - 3022 6187 0 4 79,182,134,418, 0,984,2596,2747, -,-,-,-, 710119 Satellite W-chromosome 585 chrUn_NT_472781v1 4106 4824 GGXHOI 235 - 4106 4824 0 3 350,131,148, 0,398,570, -,-,-, 710124 Satellite W-chromosome 585 chrUn_NT_472781v1 4951 6214 GGXHOI 356 - 4951 6214 0 4 442,373,239,166, 0,453,840,1097, -,-,-,-, 710125 Satellite W-chromosome 585 chrUn_NT_472784v1 2715 3333 GGXHOI 341 - 2715 3333 0 2 153,453, 0,165, -,-, 710147 Satellite W-chromosome 585 chrUn_NT_472784v1 3502 4448 GGXHOI 268 - 3502 4448 0 2 152,750, 0,196, -,-, 710148 Satellite W-chromosome 585 chrUn_NT_472784v1 5495 6225 GGXHOI 414 - 5495 6225 0 2 448,263, 0,467, -,-, 710150 Satellite W-chromosome 585 chrUn_NT_472786v1 1589 4126 GGXHOI 414 - 1589 4126 0 4 523,188,1201,520, 0,559,779,2017, -,-,-,-, 710157 Satellite W-chromosome 585 chrUn_NT_472786v1 4203 6217 GGXHOI 365 - 4203 6217 0 4 116,752,412,650, 0,130,901,1364, -,-,-,-, 710158 Satellite W-chromosome 585 chrUn_NT_472790v1 4053 5319 CR1-H 590 - 4053 5319 0 2 117,1149, 0,117, -,-, 710168 LINE CR1 585 chrUn_NT_472791v1 407 1347 (CCTTG)n 644 + 407 1347 0 2 429,499, 0,441, +,+, 710171 Simple_repeat Simple_repeat 585 chrUn_NT_472791v1 1483 2065 (CCTTG)n 609 + 1483 2065 0 3 139,46,200, 0,325,382, +,+,+, 710173 Simple_repeat Simple_repeat 585 chrUn_NT_472791v1 2179 3146 (CCTTG)n 644 + 2179 3146 0 4 104,84,384,198, 0,285,369,769, +,+,+,+, 710176 Simple_repeat Simple_repeat 585 chrUn_NT_472791v1 3538 4076 (CCTTG)n 544 + 3538 4076 0 2 259,93, 0,445, +,+, 710181 Simple_repeat Simple_repeat 585 chrUn_NT_472791v1 4606 5162 (CCTTG)n 652 + 4606 5162 0 2 114,270, 0,286, +,+, 710186 Simple_repeat Simple_repeat 585 chrUn_NT_472792v1 1129 1909 GGXHOI 293 + 1129 1909 0 3 180,307,227, 0,204,553, +,+,+, 710196 Satellite W-chromosome 585 chrUn_NT_472792v1 2184 2634 GGXHOI 340 + 2184 2634 0 2 177,256, 0,194, +,+, 710197 Satellite W-chromosome 585 chrUn_NT_472792v1 2719 5096 GGXHOI 351 + 2719 5096 0 4 511,615,606,516, 0,549,1214,1861, +,+,+,+, 710198 Satellite W-chromosome 585 chrUn_NT_472795v1 1935 3046 GGXHOI 401 + 1935 3046 0 2 536,522, 0,589, +,+, 710215 Satellite W-chromosome 585 chrUn_NT_472795v1 3165 4510 GGXHOI 344 + 3165 4510 0 4 136,553,465,146, 0,148,720,1199, +,+,+,+, 710216 Satellite W-chromosome 585 chrUn_NT_472795v1 4589 5208 GGXHOI 360 + 4589 5208 0 2 408,149, 0,470, +,+, 710217 Satellite W-chromosome 585 chrUn_NT_472797v1 3788 3970 (CCACT)n 186 + 3788 3970 0 2 9,86, 0,96, +,+, 710241 Simple_repeat Simple_repeat 585 chrUn_NT_472798v1 1136 2139 GGLTR3D 678 - 1136 2139 0 2 586,413, 0,590, -,-, 710252 LTR ERVL 585 chrUn_NT_472798v1 2348 2664 GGERV10_LTR 456 + 2348 2664 0 2 74,158, 0,158, +,+, 710255 LTR ERVL 585 chrUn_NT_472799v1 612 667 (AGGCA)n 412 + 612 667 0 2 11,15, 0,40, +,+, 710259 Simple_repeat Simple_repeat 585 chrUn_NT_472799v1 1457 2140 (CAAGG)n 597 + 1457 2140 0 2 308,375, 0,308, +,+, 710266 Simple_repeat Simple_repeat 585 chrUn_NT_472799v1 2669 3314 (CAAGG)n 681 + 2669 3314 0 3 205,234,187, 0,224,458, +,+,+, 710270 Simple_repeat Simple_repeat 585 chrUn_NT_472799v1 3327 4051 (CAAGG)n 630 + 3327 4051 0 2 178,229, 0,495, +,+, 710272 Simple_repeat Simple_repeat 585 chrUn_NT_472799v1 4587 5149 (CAAGG)n 607 + 4587 5149 0 3 187,161,20, 0,198,542, +,+,+, 710278 Simple_repeat Simple_repeat 585 chrUn_NT_472801v1 760 4602 GGXHOI 417 + 760 4602 0 6 335,504,900,1488,64,434, 0,346,863,1779,3324,3408, +,+,+,+,+,+, 710289 Satellite W-chromosome 585 chrUn_NT_472801v1 4717 6145 GGXHOI 382 + 4717 6145 0 2 483,925, 0,503, +,+, 710290 Satellite W-chromosome 585 chrUn_NT_472804v1 3225 4157 GGXHOI 406 - 3225 4157 0 2 582,337, 0,595, -,-, 710304 Satellite W-chromosome 585 chrUn_NT_472804v1 4241 5457 GGXHOI 375 - 4241 5457 0 4 357,99,215,454, 0,373,489,762, -,-,-,-, 710305 Satellite W-chromosome 585 chrUn_NT_472807v1 4711 5497 (ACCCCATAGGG)n 501 - 4711 5497 0 3 350,152,215, 0,375,571, -,-,-, 710328 Satellite Satellite 585 chrUn_NT_472809v1 911 995 (CCCTC)n 322 + 911 995 0 2 37,12, 0,72, +,+, 710338 Simple_repeat Simple_repeat 585 chrUn_NT_472811v1 5200 6158 GGXHOI 401 - 5200 6158 0 2 360,542, 0,416, -,-, 710361 Satellite W-chromosome 585 chrUn_NT_472812v1 6068 6165 G-rich 540 + 6068 6165 0 2 29,43, 0,54, +,+, 710370 Low_complexity Low_complexity 585 chrUn_NT_472813v1 2225 2599 (CGAGG)n 555 + 2225 2599 0 2 178,181, 0,193, +,+, 710383 Simple_repeat Simple_repeat 585 chrUn_NT_472813v1 4731 5634 (CGAGG)n 524 + 4731 5634 0 3 185,172,477, 0,231,426, +,+,+, 710393 Simple_repeat Simple_repeat 585 chrUn_NT_472815v1 4882 5758 GGXHOI 340 + 4882 5758 0 2 599,215, 0,661, +,+, 710421 Satellite W-chromosome 585 chrUn_NT_472817v1 139 749 (CAAGG)n 530 + 139 749 0 2 284,180, 0,430, +,+, 710427 Simple_repeat Simple_repeat 585 chrUn_NT_472818v1 314 551 (CTCTATGGGG)n 444 + 314 551 0 2 94,22, 0,215, +,+, 710441 Satellite Satellite 585 chrUn_NT_472818v1 533 891 (ACCCATAGAG)n 596 - 533 891 0 2 204,32, 0,326, -,-, 710443 Satellite Satellite 585 chrUn_NT_472818v1 1683 2552 (ACCCATAGAG)n 647 - 1683 2552 0 3 245,422,22, 0,245,847, -,-,-, 710450 Satellite Satellite 585 chrUn_NT_472818v1 2904 3678 (ACCCATAGAG)n 629 - 2904 3678 0 4 32,32,196,75, 0,154,186,699, -,-,-,-, 710455 Satellite Satellite 585 chrUn_NT_472818v1 3286 3531 (CTCTATGGGG)n 506 + 3286 3531 0 2 66,61, 0,184, +,+, 710457 Satellite Satellite 585 chrUn_NT_472818v1 3813 4626 (ACCCATAGGG)n 612 - 3813 4626 0 3 139,164,269, 0,259,544, -,-,-, 710461 Satellite Satellite 585 chrUn_NT_472819v1 841 5431 GGXHOI 377 - 841 5431 0 4 2087,357,1020,1024, 0,2106,2518,3566, -,-,-,-, 710470 Satellite W-chromosome 585 chrUn_NT_472819v1 5495 6191 GGXHOI 354 - 5495 6191 0 2 531,149, 0,547, -,-, 710471 Satellite W-chromosome 585 chrUn_NT_472820v1 4123 4740 CR1-H 660 - 4123 4740 0 2 140,471, 0,146, -,-, 710476 LINE CR1 585 chrUn_NT_472821v1 1568 3267 GGXHOI 370 - 1568 3267 0 4 683,123,136,671, 0,709,846,1028, -,-,-,-, 710479 Satellite W-chromosome 585 chrUn_NT_472821v1 3632 6190 GGXHOI 392 - 3632 6190 0 3 505,1632,326, 0,548,2232, -,-,-, 710481 Satellite W-chromosome 585 chrUn_NT_472823v1 529 2589 (CGAGG)n 590 + 529 2589 0 4 192,18,165,238, 0,1141,1657,1822, +,+,+,+, 710485 Simple_repeat Simple_repeat 585 chrUn_NT_472823v1 3133 3515 (CGAGG)n 590 + 3133 3515 0 2 183,179, 0,203, +,+, 710494 Simple_repeat Simple_repeat 585 chrUn_NT_472823v1 3549 4695 (CGAGG)n 585 + 3549 4695 0 5 180,184,230,190,155, 0,180,375,625,991, +,+,+,+,+, 710496 Simple_repeat Simple_repeat 585 chrUn_NT_472823v1 5396 5870 (CAAGG)n 486 + 5396 5870 0 2 255,36, 0,438, +,+, 710502 Simple_repeat Simple_repeat 585 chrUn_NT_472826v1 682 1665 GGXHOI 387 - 682 1665 0 3 265,352,332, 0,285,651, -,-,-, 710507 Satellite W-chromosome 585 chrUn_NT_472826v1 1749 2563 GGXHOI 345 - 1749 2563 0 2 490,310, 0,504, -,-, 710508 Satellite W-chromosome 585 chrUn_NT_472828v1 91 461 (CGAGG)n 536 + 91 461 0 2 171,178, 0,192, +,+, 710515 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 758 1263 (CGAGG)n 506 + 758 1263 0 2 246,80, 0,425, +,+, 710516 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 1998 3061 (CGAGG)n 543 + 1998 3061 0 2 352,675, 0,388, +,+, 710520 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 3133 3715 (CGAGG)n 487 + 3133 3715 0 2 192,351, 0,231, +,+, 710521 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 4102 4477 (CGAGG)n 511 + 4102 4477 0 2 182,179, 0,196, +,+, 710523 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 4845 5210 (CGAGG)n 514 + 4845 5210 0 2 176,175, 0,190, +,+, 710525 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 5312 5709 (CGAGG)n 522 + 5312 5709 0 2 174,176, 0,221, +,+, 710526 Simple_repeat Simple_repeat 585 chrUn_NT_472828v1 5799 6159 (CGAGG)n 497 + 5799 6159 0 2 152,190, 0,170, +,+, 710528 Simple_repeat Simple_repeat 585 chrUn_NT_472830v1 1230 2269 GGXHOI 570 - 1230 2269 0 2 227,589, 0,450, -,-, 710557 Satellite W-chromosome 585 chrUn_NT_472831v1 3935 4249 CR1-F 396 + 3935 4249 0 2 114,89, 0,225, +,+, 710565 LINE CR1 585 chrUn_NT_472833v1 4817 5148 CR1-F2 524 - 4817 5148 0 2 145,73, 0,258, -,-, 710570 LINE CR1 585 chrUn_NT_472834v1 2111 6139 GGXHOI 495 - 2111 6139 0 4 424,441,1152,1249, 0,835,1584,2779, -,-,-,-, 710576 Satellite W-chromosome 585 chrUn_NT_472835v1 5423 6182 GGXHOI 415 - 5423 6182 0 2 543,176, 0,583, -,-, 710584 Satellite W-chromosome 585 chrUn_NT_472836v1 278 1062 GGXHOI 572 - 278 1062 0 2 200,219, 0,565, -,-, 710586 Satellite W-chromosome 585 chrUn_NT_472836v1 1668 4967 GGXHOI 456 - 1668 4967 0 2 145,3136, 0,163, -,-, 710589 Satellite W-chromosome 585 chrUn_NT_472837v1 3695 4291 GGXHOI 390 + 3695 4291 0 2 142,438, 0,158, +,+, 710593 Satellite W-chromosome 585 chrUn_NT_472837v1 4878 6185 GGXHOI 394 + 4878 6185 0 2 667,588, 0,719, +,+, 710595 Satellite W-chromosome 585 chrUn_NT_472838v1 972 1268 GGXHOI 343 - 972 1268 0 2 148,131, 0,165, -,-, 710597 Satellite W-chromosome 585 chrUn_NT_472838v1 1390 2361 GGXHOI 365 - 1390 2361 0 3 256,260,365, 0,299,606, -,-,-, 710598 Satellite W-chromosome 585 chrUn_NT_472838v1 3093 4297 GGXHOI 421 - 3093 4297 0 5 223,146,443,137,103, 0,286,469,923,1101, -,-,-,-,-, 710601 Satellite W-chromosome 585 chrUn_NT_472838v1 4592 6109 GGXHOI 428 - 4592 6109 0 6 150,139,179,187,402,363, 0,162,321,514,739,1154, -,-,-,-,-,-, 710603 Satellite W-chromosome 585 chrUn_NT_472839v1 1028 2677 (CA)n 448 + 1028 2677 0 4 199,922,198,285, 0,220,1153,1364, +,+,+,+, 710607 Simple_repeat Simple_repeat 585 chrUn_NT_472840v1 2642 6088 CR1-F 592 + 2642 6088 0 11 175,190,200,203,204,201,149,198,178,168,190, 0,220,452,952,1197,1443,1906,2343,2813,3036,3256, +,+,+,+,+,+,+,+,+,+,+, 710615 LINE CR1 585 chrUn_NT_472841v1 727 1109 (ACCCCATAGGG)n 614 + 727 1109 0 3 93,40,188, 0,154,194, +,+,+, 710624 Satellite Satellite 585 chrUn_NT_472841v1 1445 1796 (ACCCCATAGGG)n 687 + 1445 1796 0 3 103,26,162, 0,163,189, +,+,+, 710628 Satellite Satellite 585 chrUn_NT_472841v1 1959 2245 (ACCCCATAGGG)n 696 + 1959 2245 0 2 145,141, 0,145, +,+, 710631 Satellite Satellite 585 chrUn_NT_472841v1 2658 3499 (ACCCCATAGGG)n 692 + 2658 3499 0 2 254,442, 0,399, +,+, 710635 Satellite Satellite 585 chrUn_NT_472841v1 4656 6175 (ACCCCATAGGG)n 610 + 4656 6175 0 6 273,182,126,259,265,29, 0,513,741,925,1184,1490, +,+,+,+,+,+, 710645 Satellite Satellite 585 chrUn_NT_472842v1 1666 2551 GGXHOI 430 + 1666 2551 0 2 721,148, 0,737, +,+, 710653 Satellite W-chromosome 585 chrUn_NT_472842v1 3429 3980 GGXHOI 367 + 3429 3980 0 2 172,359, 0,192, +,+, 710656 Satellite W-chromosome 585 chrUn_NT_472843v1 3692 4743 GGXHOI 378 - 3692 4743 0 2 516,472, 0,579, -,-, 710665 Satellite W-chromosome 585 chrUn_NT_472845v1 981 4097 CR1-F 885 - 981 4097 0 2 520,2487, 0,629, -,-, 710673 LINE CR1 585 chrUn_NT_472847v1 842 1127 (GCCCCACAGCT)n 365 - 842 1127 0 2 125,124, 0,161, -,-, 710678 Satellite Satellite 585 chrUn_NT_472849v1 1266 1580 GGXHOI 290 . 1266 1580 0 2 152,143, 0,171, +,-, 710690 Satellite W-chromosome 585 chrUn_NT_472849v1 1467 3676 Sat-CR1_GG 203 - 1467 3676 0 4 257,65,107,65, 0,449,1844,2144, -,-,-,-, 710691 Satellite Satellite 585 chrUn_NT_472849v1 4849 5165 GGXHOI 298 . 4849 5165 0 2 154,143, 0,173, +,-, 710698 Satellite W-chromosome 585 chrUn_NT_472849v1 5052 5574 Sat-CR1_GG 176 - 5052 5574 0 2 257,72, 0,450, -,-, 710699 Satellite Satellite 585 chrUn_NT_472851v1 755 2288 GGXHOI 369 - 755 2288 0 2 1033,486, 0,1047, -,-, 710704 Satellite W-chromosome 585 chrUn_NT_472851v1 2372 4401 GGXHOI 400 - 2372 4401 0 5 479,145,916,147,284, 0,493,653,1583,1745, -,-,-,-,-, 710705 Satellite W-chromosome 585 chrUn_NT_472851v1 4483 6169 GGXHOI 390 - 4483 6169 0 4 355,177,148,956, 0,367,567,730, -,-,-,-, 710706 Satellite W-chromosome 585 chrUn_NT_472852v1 4624 6148 GGXHOI 504 - 4624 6148 0 3 645,195,72, 0,1022,1452, -,-,-, 710712 Satellite W-chromosome 585 chrUn_NT_472854v1 1150 1741 (GCCCCACAGCT)n 508 - 1150 1741 0 3 98,101,44, 0,228,547, -,-,-, 710718 Satellite Satellite 585 chrUn_NT_472854v1 3697 4229 (ACCCCATAGGG)n 514 - 3697 4229 0 2 386,40, 0,492, -,-, 710733 Satellite Satellite 585 chrUn_NT_472854v1 4884 5225 (ACCCCATAGGG)n 604 - 4884 5225 0 2 215,114, 0,227, -,-, 710740 Satellite Satellite 585 chrUn_NT_472854v1 5664 6163 (ACCCATAGGG)n 580 - 5664 6163 0 2 207,175, 0,324, -,-, 710743 Satellite Satellite 585 chrUn_NT_472856v1 3577 3868 CR1-X2 395 - 3577 3868 0 2 228,63, 0,228, -,-, 710749 LINE CR1 585 chrUn_NT_472857v1 234 3903 CR1-F 516 + 234 3903 0 10 203,153,196,190,202,203,204,155,199,186, 0,459,894,1348,1836,2080,2325,2795,3240,3483, +,+,+,+,+,+,+,+,+,+, 710753 LINE CR1 585 chrUn_NT_472857v1 3945 6157 CR1-F 545 + 3945 6157 0 7 199,203,203,206,152,202,67, 0,495,740,985,1456,1896,2145, +,+,+,+,+,+,+, 710760 LINE CR1 585 chrUn_NT_472860v1 1313 3062 GGXHOI 376 - 1313 3062 0 4 260,645,566,206, 0,273,935,1543, -,-,-,-, 710767 Satellite W-chromosome 585 chrUn_NT_472860v1 4032 4606 GGXHOI 380 - 4032 4606 0 2 409,130, 0,444, -,-, 710770 Satellite W-chromosome 585 chrUn_NT_472860v1 4692 6153 GGXHOI 373 - 4692 6153 0 3 262,202,918, 0,324,543, -,-,-, 710771 Satellite W-chromosome 585 chrUn_NT_472862v1 4333 6146 GGXHOI 382 - 4333 6146 0 2 999,766, 0,1047, -,-, 710777 Satellite W-chromosome 585 chrUn_NT_472863v1 3718 4339 CR1-H 683 - 3718 4339 0 2 139,476, 0,145, -,-, 710782 LINE CR1 585 chrUn_NT_472864v1 890 1372 (GCCTG)n 472 + 890 1372 0 2 131,173, 0,309, +,+, 710785 Simple_repeat Simple_repeat 585 chrUn_NT_472864v1 1469 3392 (CCTTG)n 640 + 1469 3392 0 7 680,57,176,185,175,185,177, 0,864,937,1128,1335,1547,1746, +,+,+,+,+,+,+, 710789 Simple_repeat Simple_repeat 585 chrUn_NT_472864v1 3453 4480 (CCTTG)n 514 + 3453 4480 0 3 215,417,34, 0,230,993, +,+,+, 710792 Simple_repeat Simple_repeat 585 chrUn_NT_472864v1 4621 5256 (CCTTG)n 602 + 4621 5256 0 2 250,353, 0,282, +,+, 710795 Simple_repeat Simple_repeat 585 chrUn_NT_472864v1 5364 6148 (CCTTG)n 559 + 5364 6148 0 3 237,141,192, 0,428,592, +,+,+, 710796 Simple_repeat Simple_repeat 585 chrUn_NT_472865v1 2636 2883 CR1-X 468 + 2636 2883 0 2 170,76, 0,171, +,+, 710801 LINE CR1 585 chrUn_NT_472865v1 4281 4969 GGERVL-C-int 386 + 4281 4969 0 2 528,96, 0,592, +,+, 710802 LTR ERVL 585 chrUn_NT_472866v1 334 1593 (TTAGGG)n 559 + 334 1593 0 3 524,301,363, 0,582,896, +,+,+, 710806 Simple_repeat Simple_repeat 585 chrUn_NT_472866v1 2486 4023 (TTAGGG)n 612 + 2486 4023 0 3 374,557,565, 0,389,972, +,+,+, 710809 Simple_repeat Simple_repeat 585 chrUn_NT_472866v1 4119 4511 (TTAGGG)n 554 + 4119 4511 0 2 179,196, 0,196, +,+, 710811 Simple_repeat Simple_repeat 585 chrUn_NT_472866v1 5036 6148 (TTAGGG)n 660 + 5036 6148 0 3 453,208,187, 0,717,925, +,+,+, 710816 Simple_repeat Simple_repeat 585 chrUn_NT_472867v1 1358 2950 GGXHOI 383 - 1358 2950 0 4 385,475,394,291, 0,407,896,1301, -,-,-,-, 710819 Satellite W-chromosome 585 chrUn_NT_472867v1 3241 6138 GGXHOI 399 - 3241 6138 0 6 550,432,393,693,473,253, 0,575,1032,1441,2156,2644, -,-,-,-,-,-, 710820 Satellite W-chromosome 585 chrUn_NT_472868v1 1495 3086 GGXHOI 392 + 1495 3086 0 4 133,144,1118,130, 0,148,330,1461, +,+,+,+, 710823 Satellite W-chromosome 585 chrUn_NT_472868v1 3230 5755 GGXHOI 371 + 3230 5755 0 4 363,549,1336,234, 0,379,940,2291, +,+,+,+, 710824 Satellite W-chromosome 585 chrUn_NT_472870v1 1923 4759 GGERVL-B-int 723 + 1923 4759 0 2 1925,911, 0,1925, +,+, 710835 LTR ERVL 585 chrUn_NT_472870v1 5491 5905 GGLTR7B 281 + 5491 5905 0 2 101,311, 0,103, +,+, 710837 LTR ERV1 585 chrUn_NT_472872v1 161 798 (CGAGG)n 493 + 161 798 0 2 405,187, 0,450, +,+, 710842 Simple_repeat Simple_repeat 585 chrUn_NT_472872v1 2466 3548 (CGAGG)n 530 + 2466 3548 0 2 178,870, 0,212, +,+, 710847 Simple_repeat Simple_repeat 585 chrUn_NT_472874v1 3317 3627 (ACCCATAGAG)n 582 - 3317 3627 0 2 119,191, 0,119, -,-, 710871 Satellite Satellite 585 chrUn_NT_472874v1 3663 4512 (GCCCCACAGCT)n 401 - 3663 4512 0 3 24,41,226, 0,524,623, -,-,-, 710873 Satellite Satellite 585 chrUn_NT_472874v1 3741 3912 (GCCCCACAGCT)n 460 - 3741 3912 0 2 55,59, 0,112, -,-, 710875 Satellite Satellite 585 chrUn_NT_472878v1 2076 3620 GGXHOI 387 + 2076 3620 0 2 472,1009, 0,535, +,+, 710921 Satellite W-chromosome 585 chrUn_NT_472878v1 3800 5425 GGXHOI 392 + 3800 5425 0 2 1046,516, 0,1109, +,+, 710922 Satellite W-chromosome 585 chrUn_NT_472879v1 2488 5020 GGXHOI 343 + 2488 5020 0 4 1454,303,145,576, 0,1471,1794,1956, +,+,+,+, 710926 Satellite W-chromosome 585 chrUn_NT_472879v1 5414 6134 GGXHOI 405 + 5414 6134 0 3 151,243,296, 0,167,424, +,+,+, 710928 Satellite W-chromosome 585 chrUn_NT_472880v1 5506 5881 (CTCTATGGGG)n 597 + 5506 5881 0 2 227,115, 0,260, +,+, 710932 Satellite Satellite 585 chrUn_NT_472882v1 549 6132 GGXHOI 390 - 549 6132 0 3 2743,52,2752, 0,2757,2831, -,-,-, 710938 Satellite W-chromosome 585 chrUn_NT_472885v1 1837 2845 GGXHOI 550 + 1837 2845 0 3 235,44,224, 0,517,784, +,+,+, 710947 Satellite W-chromosome 585 chrUn_NT_472885v1 2910 4545 GGXHOI 581 + 2910 4545 0 4 148,380,466,228, 0,161,591,1407, +,+,+,+, 710950 Satellite W-chromosome 585 chrUn_NT_472885v1 4609 5368 GGXHOI 574 + 4609 5368 0 2 544,165, 0,594, +,+, 710952 Satellite W-chromosome 585 chrUn_NT_472885v1 5448 6116 GGXHOI 560 + 5448 6116 0 2 344,99, 0,569, +,+, 710953 Satellite W-chromosome 585 chrUn_NT_472886v1 1719 4093 GGXHOI 357 - 1719 4093 0 3 842,679,779, 0,900,1595, -,-,-, 710956 Satellite W-chromosome 585 chrUn_NT_472886v1 4396 5986 GGXHOI 343 - 4396 5986 0 3 844,354,321, 0,902,1269, -,-,-, 710957 Satellite W-chromosome 585 chrUn_NT_472887v1 1741 1945 (TCCAC)n 294 + 1741 1945 0 2 73,84, 0,120, +,+, 710961 Simple_repeat Simple_repeat 585 chrUn_NT_472887v1 6058 6130 (TCCTC)n 542 + 6058 6130 0 2 8,25, 0,47, +,+, 710977 Simple_repeat Simple_repeat 585 chrUn_NT_472888v1 665 3984 GGXHOI 397 - 665 3984 0 7 760,145,468,136,1139,258,265, 0,804,981,1466,1624,2781,3054, -,-,-,-,-,-,-, 710980 Satellite W-chromosome 585 chrUn_NT_472888v1 4177 4449 GGXHOI 315 - 4177 4449 0 2 127,127, 0,145, -,-, 710981 Satellite W-chromosome 585 chrUn_NT_472888v1 4569 4902 GGXHOI 333 - 4569 4902 0 2 140,180, 0,153, -,-, 710982 Satellite W-chromosome 585 chrUn_NT_472888v1 5060 5560 GGXHOI 298 - 5060 5560 0 2 167,314, 0,186, -,-, 710983 Satellite W-chromosome 585 chrUn_NT_472888v1 5694 6126 GGXHOI 346 - 5694 6126 0 2 143,271, 0,161, -,-, 710984 Satellite W-chromosome 585 chrUn_NT_472890v1 3582 3976 (GCCCCACAGCT)n 449 - 3582 3976 0 2 228,166, 0,228, -,-, 711001 Satellite Satellite 585 chrUn_NT_472890v1 5000 5383 (ACCCATTGGG)n 541 + 5000 5383 0 2 123,240, 0,143, +,+, 711004 Satellite Satellite 585 chrUn_NT_472890v1 5297 5555 (CCCCATTGGG)n 470 + 5297 5555 0 2 114,107, 0,151, +,+, 711005 Satellite Satellite 585 chrUn_NT_472894v1 4694 5325 (GGATG)n 604 + 4694 5325 0 3 190,194,192, 0,221,439, +,+,+, 711044 Simple_repeat Simple_repeat 585 chrUn_NT_472894v1 5385 5793 (GGATG)n 670 + 5385 5793 0 2 192,185, 0,223, +,+, 711046 Simple_repeat Simple_repeat 585 chrUn_NT_472896v1 3065 3458 (ACCCATAGGG)n 307 + 3065 3458 0 2 252,125, 0,268, +,+, 711078 Satellite Satellite 585 chrUn_NT_472902v1 2207 2872 (CGAGG)n 492 + 2207 2872 0 2 242,395, 0,270, +,+, 711105 Simple_repeat Simple_repeat 585 chrUn_NT_472902v1 4224 5488 (CGAGG)n 379 + 4224 5488 0 2 241,1008, 0,256, +,+, 711110 Simple_repeat Simple_repeat 585 chrUn_NT_472902v1 5545 6099 (CGAGG)n 477 + 5545 6099 0 2 228,289, 0,265, +,+, 711112 Simple_repeat Simple_repeat 585 chrUn_NT_472904v1 2337 3835 GGXHOI 499 - 2337 3835 0 3 167,13,878, 0,178,620, -,-,-, 711129 Satellite W-chromosome 585 chrUn_NT_472904v1 4061 6110 GGXHOI 538 - 4061 6110 0 4 563,248,194,18, 0,1010,1581,2031, -,-,-,-, 711132 Satellite W-chromosome 585 chrUn_NT_472905v1 432 1585 (CGAGG)n 549 + 432 1585 0 3 661,178,260, 0,681,893, +,+,+, 711142 Simple_repeat Simple_repeat 585 chrUn_NT_472905v1 1602 2695 (CGAGG)n 588 + 1602 2695 0 2 238,610, 0,483, +,+, 711144 Simple_repeat Simple_repeat 585 chrUn_NT_472905v1 2716 3446 (CGAGG)n 605 + 2716 3446 0 3 119,234,178, 0,302,552, +,+,+, 711147 Simple_repeat Simple_repeat 585 chrUn_NT_472905v1 3535 5731 (CGAGG)n 527 + 3535 5731 0 6 295,512,177,667,38,179, 0,334,876,1083,1928,2017, +,+,+,+,+,+, 711149 Simple_repeat Simple_repeat 585 chrUn_NT_472906v1 2301 2922 CR1-H 683 - 2301 2922 0 2 139,476, 0,145, -,-, 711155 LINE CR1 585 chrUn_NT_472906v1 5532 5987 CR1-H 679 - 5532 5987 0 2 162,293, 0,162, -,-, 711159 LINE CR1 585 chrUn_NT_472907v1 1692 2314 CR1-H 680 - 1692 2314 0 2 139,477, 0,145, -,-, 711161 LINE CR1 585 chrUn_NT_472907v1 5518 5974 CR1-H 665 - 5518 5974 0 2 161,295, 0,161, -,-, 711165 LINE CR1 585 chrUn_NT_472908v1 4619 5882 GGLTR7-int 276 - 4619 5882 0 2 287,233, 0,1030, -,-, 711168 LTR ERV1 585 chrUn_NT_472909v1 233 592 (CAGGC)n 482 + 233 592 0 2 106,73, 0,286, +,+, 711170 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 531 1051 (CAAGG)n 636 + 531 1051 0 2 126,64, 0,456, +,+, 711172 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 1224 2063 (CAAGG)n 599 + 1224 2063 0 2 377,445, 0,394, +,+, 711177 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 2090 2570 (CAAGG)n 616 + 2090 2570 0 2 221,81, 0,399, +,+, 711179 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 2311 2700 (CAGGC)n 512 + 2311 2700 0 2 178,211, 0,178, +,+, 711180 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 2718 3283 (CAAGG)n 623 + 2718 3283 0 2 130,231, 0,334, +,+, 711181 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 3260 4119 (CAAGG)n 600 + 3260 4119 0 2 219,449, 0,410, +,+, 711183 Simple_repeat Simple_repeat 585 chrUn_NT_472909v1 4136 6001 (CAAGG)n 610 + 4136 6001 0 4 671,209,80,215, 0,1027,1236,1650, +,+,+,+, 711186 Simple_repeat Simple_repeat 585 chrUn_NT_472912v1 586 1395 (ACCCATAGAG)n 610 + 586 1395 0 3 250,169,63, 0,469,746, +,+,+, 711207 Satellite Satellite 585 chrUn_NT_472912v1 1365 1806 (ACCCATAGGG)n 610 - 1365 1806 0 3 152,22,31, 0,268,410, -,-,-, 711210 Satellite Satellite 585 chrUn_NT_472912v1 5129 5410 (ACCCATAGGG)n 526 - 5129 5410 0 2 157,52, 0,229, -,-, 711226 Satellite Satellite 585 chrUn_NT_472913v1 1524 2588 (CGAGG)n 572 + 1524 2588 0 2 529,535, 0,529, +,+, 711239 Simple_repeat Simple_repeat 585 chrUn_NT_472913v1 3851 4301 (CGAGG)n 604 + 3851 4301 0 2 184,266, 0,184, +,+, 711246 Simple_repeat Simple_repeat 585 chrUn_NT_472913v1 4656 5486 (CGAGG)n 577 + 4656 5486 0 2 613,179, 0,651, +,+, 711250 Simple_repeat Simple_repeat 585 chrUn_NT_472914v1 2195 3854 GGXHOI 402 - 2195 3854 0 3 77,1150,363, 0,97,1296, -,-,-, 711256 Satellite W-chromosome 585 chrUn_NT_472914v1 3983 4478 GGXHOI 431 - 3983 4478 0 2 224,259, 0,236, -,-, 711257 Satellite W-chromosome 585 chrUn_NT_472914v1 4548 5359 GGXHOI 403 - 4548 5359 0 2 649,128, 0,683, -,-, 711258 Satellite W-chromosome 585 chrUn_NT_472914v1 5448 6098 GGXHOI 383 - 5448 6098 0 3 134,314,133, 0,153,517, -,-,-, 711259 Satellite W-chromosome 585 chrUn_NT_472915v1 5121 6094 GGXHOI 350 + 5121 6094 0 2 397,528, 0,445, +,+, 711262 Satellite W-chromosome 585 chrUn_NT_472917v1 1516 5985 GGXHOI 424 - 1516 5985 0 12 565,155,631,587,239,147,367,560,229,158,153,435, 0,582,748,1390,1988,2239,2405,2783,3360,3638,3857,4034, -,-,-,-,-,-,-,-,-,-,-,-, 711271 Satellite W-chromosome 585 chrUn_NT_472919v1 1672 2754 GGXHOI 404 - 1672 2754 0 2 262,807, 0,275, -,-, 711289 Satellite W-chromosome 585 chrUn_NT_472919v1 3797 6094 GGXHOI 376 - 3797 6094 0 2 790,1488, 0,809, -,-, 711291 Satellite W-chromosome 585 chrUn_NT_472921v1 1452 1939 GGXHOI 291 + 1452 1939 0 2 304,126, 0,361, +,+, 711304 Satellite W-chromosome 585 chrUn_NT_472921v1 2349 2899 GGXHOI 398 + 2349 2899 0 3 132,249,137, 0,148,413, +,+,+, 711305 Satellite W-chromosome 585 chrUn_NT_472921v1 3622 6011 GGXHOI 353 + 3622 6011 0 5 779,176,306,597,419, 0,794,1017,1357,1970, +,+,+,+,+, 711308 Satellite W-chromosome 585 chrUn_NT_472922v1 1394 1789 (TACTG)n 315 + 1394 1789 0 2 185,176, 0,219, +,+, 711312 Simple_repeat Simple_repeat 585 chrUn_NT_472922v1 3435 4112 (TACTG)n 390 + 3435 4112 0 2 327,305, 0,372, +,+, 711314 Simple_repeat Simple_repeat 585 chrUn_NT_472924v1 1281 2468 GGXHOI 546 - 1281 2468 0 2 157,983, 0,204, -,-, 711337 Satellite W-chromosome 585 chrUn_NT_472924v1 2572 5068 GGXHOI 549 - 2572 5068 0 3 968,625,497, 0,996,1999, -,-,-, 711339 Satellite W-chromosome 585 chrUn_NT_472925v1 1948 2572 CR1-C4 532 + 1948 2572 0 2 334,177, 0,447, +,+, 711343 LINE CR1 585 chrUn_NT_472926v1 1506 4310 (ACCCATAGGG)n 655 + 1506 4310 0 11 201,81,116,98,53,48,135,323,156,136,539, 0,529,672,799,1132,1391,1487,1622,1952,2129,2265, +,+,+,+,+,+,+,+,+,+,+, 711352 Satellite Satellite 585 chrUn_NT_472926v1 1707 2175 (ACCCATAGAG)n 616 + 1707 2175 0 3 118,210,140, 0,118,328, +,+,+, 711353 Satellite Satellite 585 chrUn_NT_472926v1 2403 2638 (ACCCATAGAG)n 674 + 2403 2638 0 2 79,36, 0,199, +,+, 711354 Satellite Satellite 585 chrUn_NT_472926v1 4333 4987 (ACCCATAGGG)n 577 + 4333 4987 0 2 387,224, 0,430, +,+, 711359 Satellite Satellite 585 chrUn_NT_472926v1 4999 5773 (ACCCATAGGG)n 694 + 4999 5773 0 4 116,278,83,30, 0,141,537,744, +,+,+,+, 711361 Satellite Satellite 585 chrUn_NT_472927v1 1513 1796 (CCCCATTGGG)n 434 - 1513 1796 0 2 114,110, 0,173, -,-, 711367 Satellite Satellite 585 chrUn_NT_472928v1 4446 6074 GGXHOI 383 - 4446 6074 0 2 757,812, 0,816, -,-, 711372 Satellite W-chromosome 585 chrUn_NT_472931v1 1036 1648 GGXHOI 242 + 1036 1648 0 2 301,298, 0,314, +,+, 711381 Satellite W-chromosome 585 chrUn_NT_472931v1 1820 2437 GGXHOI 327 + 1820 2437 0 2 358,202, 0,415, +,+, 711382 Satellite W-chromosome 585 chrUn_NT_472931v1 2896 4912 GGXHOI 425 + 2896 4912 0 2 590,1382, 0,634, +,+, 711384 Satellite W-chromosome 585 chrUn_NT_472931v1 4998 5599 GGXHOI 335 + 4998 5599 0 2 217,342, 0,259, +,+, 711385 Satellite W-chromosome 585 chrUn_NT_472932v1 274 1300 (GAGTG)n 428 + 274 1300 0 4 335,175,216,189, 0,380,598,837, +,+,+,+, 711389 Simple_repeat Simple_repeat 585 chrUn_NT_472933v1 1094 5944 GGXHOI 387 + 1094 5944 0 6 1668,224,188,357,1812,509, 0,1686,1932,2132,2509,4341, +,+,+,+,+,+, 711397 Satellite W-chromosome 585 chrUn_NT_472937v1 221 1999 CR1-Y3 487 + 221 1999 0 3 67,57,205, 0,929,1573, +,+,+, 711415 LINE CR1 585 chrUn_NT_472937v1 5597 6070 G-rich 431 + 5597 6070 0 2 76,381, 0,92, +,+, 711421 Low_complexity Low_complexity 585 chrUn_NT_472939v1 1756 2830 GGXHOI 409 - 1756 2830 0 3 445,268,284, 0,486,790, -,-,-, 711426 Satellite W-chromosome 585 chrUn_NT_472939v1 3180 3775 GGXHOI 367 - 3180 3775 0 2 271,261, 0,334, -,-, 711427 Satellite W-chromosome 585 chrUn_NT_472939v1 3982 5766 GGXHOI 397 - 3982 5766 0 2 1037,694, 0,1090, -,-, 711428 Satellite W-chromosome 585 chrUn_NT_472940v1 2602 5094 GGXHOI 406 + 2602 5094 0 2 879,1592, 0,900, +,+, 711431 Satellite W-chromosome 585 chrUn_NT_472941v1 290 1590 Sat-CR1_GG 154 + 290 1590 0 2 107,416, 0,884, +,+, 711435 Satellite Satellite 585 chrUn_NT_472941v1 1288 6049 GGXHOI 518 + 1288 6049 0 7 660,500,20,1143,164,510,255, 0,1031,1549,1943,3783,3960,4506, +,+,+,+,+,+,+, 711437 Satellite W-chromosome 585 chrUn_NT_472942v1 1470 1976 (ACCCATTGGG)n 551 + 1470 1976 0 3 119,81,156, 0,247,350, +,+,+, 711443 Satellite Satellite 585 chrUn_NT_472942v1 2409 2780 (CAACG)n 560 + 2409 2780 0 2 178,176, 0,195, +,+, 711447 Simple_repeat Simple_repeat 585 chrUn_NT_472943v1 2583 4042 GGXHOI 345 - 2583 4042 0 3 919,227,250, 0,962,1209, -,-,-, 711453 Satellite W-chromosome 585 chrUn_NT_472943v1 4178 5978 GGXHOI 405 - 4178 5978 0 2 1165,604, 0,1196, -,-, 711454 Satellite W-chromosome 585 chrUn_NT_472944v1 113 1865 GGERVL-A-int 744 + 113 1865 0 2 456,1296, 0,456, +,+, 711457 LTR ERVL 585 chrUn_NT_472946v1 421 1538 (CGAGG)n 552 + 421 1538 0 4 266,360,244,52, 0,295,655,1065, +,+,+,+, 711467 Simple_repeat Simple_repeat 585 chrUn_NT_472946v1 1621 2215 (CGAGG)n 564 + 1621 2215 0 3 109,51,186, 0,340,408, +,+,+, 711469 Simple_repeat Simple_repeat 585 chrUn_NT_472946v1 2217 2838 (CCTCG)n 431 + 2217 2838 0 2 185,418, 0,203, +,+, 711471 Simple_repeat Simple_repeat 585 chrUn_NT_472946v1 3030 3618 (CCTCG)n 469 + 3030 3618 0 2 411,164, 0,424, +,+, 711472 Simple_repeat Simple_repeat 585 chrUn_NT_472946v1 4443 4851 (CCTCG)n 512 + 4443 4851 0 2 185,177, 0,231, +,+, 711477 Simple_repeat Simple_repeat 585 chrUn_NT_472947v1 2273 3389 CR1-B2 692 + 2273 3389 0 2 222,891, 0,225, +,+, 711483 LINE CR1 585 chrUn_NT_472948v1 4713 4947 (AAAGAACGG)n 915 + 4713 4947 0 3 43,43,39, 0,98,195, +,+,+, 711493 Simple_repeat Simple_repeat 585 chrUn_NT_472949v1 4683 5363 GGXHOI 307 - 4683 5363 0 2 164,479, 0,201, -,-, 711498 Satellite W-chromosome 585 chrUn_NT_472949v1 5453 6023 GGXHOI 362 - 5453 6023 0 2 180,341, 0,229, -,-, 711499 Satellite W-chromosome 585 chrUn_NT_472951v1 363 6059 GGLTR7-int 485 + 363 6059 0 8 608,196,185,250,1314,442,59,192, 0,610,806,1271,2815,4364,5036,5504, +,+,+,+,+,+,+,+, 711505 LTR ERV1 585 chrUn_NT_472956v1 2354 6046 GGXHOI 382 - 2354 6046 0 5 2398,175,463,355,224, 0,2414,2611,3097,3468, -,-,-,-,-, 711550 Satellite W-chromosome 585 chrUn_NT_472957v1 4078 6029 GGXHOI 578 - 4078 6029 0 2 1090,673, 0,1278, -,-, 711554 Satellite W-chromosome 585 chrUn_NT_472958v1 1243 2688 GGXHOI 513 - 1243 2688 0 2 1028,377, 0,1068, -,-, 711557 Satellite W-chromosome 585 chrUn_NT_472958v1 4283 5740 GGXHOI 530 - 4283 5740 0 2 1040,377, 0,1080, -,-, 711559 Satellite W-chromosome 585 chrUn_NT_472959v1 3531 6052 GGXHOI 398 - 3531 6052 0 3 512,1426,536, 0,527,1985, -,-,-, 711562 Satellite W-chromosome 585 chrUn_NT_472960v1 643 782 G-rich 485 + 643 782 0 2 64,48, 0,91, +,+, 711567 Low_complexity Low_complexity 585 chrUn_NT_472960v1 3063 3191 (G)n 795 + 3063 3191 0 2 44,27, 0,101, +,+, 711574 Simple_repeat Simple_repeat 585 chrUn_NT_472965v1 776 1824 (CGAGG)n 521 + 776 1824 0 3 189,617,179, 0,237,869, +,+,+, 711600 Simple_repeat Simple_repeat 585 chrUn_NT_472965v1 3544 4141 (CGAGG)n 473 + 3544 4141 0 2 368,187, 0,410, +,+, 711607 Simple_repeat Simple_repeat 585 chrUn_NT_472965v1 4508 5057 (CGAGG)n 382 + 4508 5057 0 2 293,219, 0,330, +,+, 711609 Simple_repeat Simple_repeat 585 chrUn_NT_472965v1 5117 5479 (CGAGG)n 541 + 5117 5479 0 2 170,172, 0,190, +,+, 711612 Simple_repeat Simple_repeat 585 chrUn_NT_472965v1 5585 5952 (CGAGG)n 477 + 5585 5952 0 2 179,176, 0,191, +,+, 711614 Simple_repeat Simple_repeat 585 chrUn_NT_472966v1 600 1254 GGXHOI 330 - 600 1254 0 2 340,251, 0,403, -,-, 711617 Satellite W-chromosome 585 chrUn_NT_472966v1 2527 3261 GGXHOI 332 - 2527 3261 0 2 421,259, 0,475, -,-, 711619 Satellite W-chromosome 585 chrUn_NT_472966v1 3406 4401 GGXHOI 326 - 3406 4401 0 2 551,381, 0,614, -,-, 711620 Satellite W-chromosome 585 chrUn_NT_472969v1 3429 4963 GGXHOI 598 - 3429 4963 0 2 405,572, 0,962, -,-, 711642 Satellite W-chromosome 585 chrUn_NT_472971v1 2116 6028 GGXHOI 410 - 2116 6028 0 8 212,139,281,275,302,1889,188,509, 0,226,381,679,967,1297,3199,3403, -,-,-,-,-,-,-,-, 711651 Satellite W-chromosome 585 chrUn_NT_472972v1 2170 3603 GGXHOI 364 - 2170 3603 0 5 136,455,258,138,382, 0,153,622,895,1051, -,-,-,-,-, 711654 Satellite W-chromosome 585 chrUn_NT_472972v1 4345 6040 GGXHOI 440 - 4345 6040 0 3 141,331,1117, 0,199,578, -,-,-, 711656 Satellite W-chromosome 585 chrUn_NT_472974v1 568 5964 GGXHOI 401 - 568 5964 0 8 357,359,439,2127,434,719,354,481, 0,372,751,1210,3357,3807,4541,4915, -,-,-,-,-,-,-,-, 711660 Satellite W-chromosome 585 chrUn_NT_472975v1 2848 4113 GGXHOI 347 - 2848 4113 0 2 322,926, 0,339, -,-, 711662 Satellite W-chromosome 585 chrUn_NT_472976v1 3177 4905 GGERVL-A-int 643 + 3177 4905 0 2 430,1298, 0,430, +,+, 711666 LTR ERVL 585 chrUn_NT_472977v1 3734 4124 (ACCCATAGGG)n 449 - 3734 4124 0 3 119,92,113, 0,155,277, -,-,-, 711670 Satellite Satellite 585 chrUn_NT_472978v1 312 1267 (CAAGG)n 617 + 312 1267 0 3 211,535,209, 0,211,746, +,+,+, 711674 Simple_repeat Simple_repeat 585 chrUn_NT_472978v1 1626 2436 (CAAGG)n 655 + 1626 2436 0 3 178,235,193, 0,204,617, +,+,+, 711678 Simple_repeat Simple_repeat 585 chrUn_NT_472978v1 2727 3115 (CAAGG)n 687 + 2727 3115 0 2 180,203, 0,185, +,+, 711683 Simple_repeat Simple_repeat 585 chrUn_NT_472978v1 3203 3685 (CAAGG)n 564 + 3203 3685 0 2 185,286, 0,196, +,+, 711685 Simple_repeat Simple_repeat 585 chrUn_NT_472978v1 3713 4369 (CAAGG)n 639 + 3713 4369 0 3 175,195,244, 0,211,412, +,+,+, 711687 Simple_repeat Simple_repeat 585 chrUn_NT_472979v1 2671 6034 GGERV20_I-int 921 + 2671 6034 0 3 930,1998,118, 0,1247,3245, +,+,+, 711697 LTR ERVL 585 chrUn_NT_472980v1 998 4351 (GCCCCACAGCT)n 393 - 998 4351 0 21 114,102,97,111,115,105,103,114,113,114,115,113,96,98,111,113,102,114,107,116,114, 0,166,324,474,638,805,962,1117,1284,1451,1618,1786,1957,2110,2260,2424,2590,2744,2910,3070,3239, -,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-, 711700 Satellite Satellite 585 chrUn_NT_472980v1 4456 5181 (GCCCCACAGCT)n 405 - 4456 5181 0 5 60,110,113,114,113, 0,112,274,439,612, -,-,-,-,-, 711701 Satellite Satellite 585 chrUn_NT_472981v1 672 986 (ACCCATAGGG)n 627 + 672 986 0 2 180,113, 0,201, +,+, 711705 Satellite Satellite 585 chrUn_NT_472981v1 3994 4125 (CCTAAC)n 925 + 3994 4125 0 2 33,46, 0,85, +,+, 711711 Simple_repeat Simple_repeat 585 chrUn_NT_472981v1 4953 5080 (ACCCTA)n 881 + 4953 5080 0 2 35,52, 0,75, +,+, 711717 Simple_repeat Simple_repeat 585 chrUn_NT_472983v1 5448 5738 (GCCCCACAGCT)n 264 - 5448 5738 0 2 113,129, 0,161, -,-, 711741 Satellite Satellite 585 chrUn_NT_472984v1 1029 4236 GGERV10_LTR 828 - 1029 4236 0 2 230,2975, 0,232, -,-, 711743 LTR ERVL 585 chrUn_NT_472985v1 2308 2675 (ACCCCATAGGG)n 535 + 2308 2675 0 2 148,219, 0,148, +,+, 711747 Satellite Satellite 585 chrUn_NT_472985v1 2739 3164 (ACCCCATAGGG)n 523 + 2739 3164 0 3 113,123,124, 0,124,301, +,+,+, 711748 Satellite Satellite 585 chrUn_NT_472985v1 3237 3724 (ACCCCATAGGG)n 550 + 3237 3724 0 3 126,152,165, 0,159,322, +,+,+, 711749 Satellite Satellite 585 chrUn_NT_472987v1 471 699 GGXHOI 428 + 471 699 0 2 148,64, 0,164, +,+, 711754 Satellite W-chromosome 585 chrUn_NT_472987v1 1076 2842 GGXHOI 387 + 1076 2842 0 5 392,268,582,145,270, 0,409,735,1334,1496, +,+,+,+,+, 711755 Satellite W-chromosome 585 chrUn_NT_472987v1 3023 6004 GGXHOI 353 + 3023 6004 0 3 1369,146,1432, 0,1386,1549, +,+,+, 711756 Satellite W-chromosome 585 chrUn_NT_472990v1 5749 6002 (GCCCCACAGCT)n 378 - 5749 6002 0 2 102,23, 0,230, -,-, 711773 Satellite Satellite 585 chrUn_NT_472991v1 1403 2478 (CGAGG)n 504 + 1403 2478 0 3 171,648,178, 0,217,897, +,+,+, 711784 Simple_repeat Simple_repeat 585 chrUn_NT_472991v1 2823 3780 (CGAGG)n 449 + 2823 3780 0 3 169,537,185, 0,212,772, +,+,+, 711787 Simple_repeat Simple_repeat 585 chrUn_NT_472993v1 1196 5348 GGXHOI 467 + 1196 5348 0 7 218,477,452,287,57,276,597, 0,704,1210,1950,2292,2685,3555, +,+,+,+,+,+,+, 711799 Satellite W-chromosome 585 chrUn_NT_472996v1 4583 5057 (GCCCCACAGCT)n 448 - 4583 5057 0 3 185,76,44, 0,223,430, -,-,-, 711821 Satellite Satellite 585 chrUn_NT_472998v1 3393 5985 (TTAGGG)n 646 + 3393 5985 0 6 805,872,190,187,177,181, 0,860,1732,1984,2203,2411, +,+,+,+,+,+, 711833 Simple_repeat Simple_repeat 585 chrUn_NT_472999v1 5119 5959 GGXHOI 260 - 5119 5959 0 2 156,656, 0,184, -,-, 711835 Satellite W-chromosome 585 chrUn_NT_473001v1 4376 4735 GGLTR3F2 472 + 4376 4735 0 2 80,228, 0,131, +,+, 711844 LTR ERVL 585 chrUn_NT_473002v1 4802 4917 (TCTCC)n 456 + 4802 4917 0 2 32,53, 0,62, +,+, 711868 Simple_repeat Simple_repeat 585 chrUn_NT_473004v1 572 4134 GGXHOI 437 + 572 4134 0 4 306,2022,185,964, 0,321,2361,2598, +,+,+,+, 711879 Satellite W-chromosome 585 chrUn_NT_473004v1 5063 5996 GGXHOI 292 + 5063 5996 0 3 457,144,264, 0,508,669, +,+,+, 711882 Satellite W-chromosome 585 chrUn_NT_473006v1 209 5159 GGXHOI 432 - 209 5159 0 3 3849,396,673, 0,3866,4277, -,-,-, 711895 Satellite W-chromosome 585 chrUn_NT_473007v1 4945 6006 GGXHOI 434 - 4945 6006 0 3 145,71,802, 0,157,259, -,-,-, 711901 Satellite W-chromosome 585 chrUn_NT_473009v1 117 1487 (CGAGG)n 520 + 117 1487 0 2 614,739, 0,631, +,+, 711909 Simple_repeat Simple_repeat 585 chrUn_NT_473009v1 1636 2216 (CGAGG)n 536 + 1636 2216 0 2 215,306, 0,274, +,+, 711910 Simple_repeat Simple_repeat 585 chrUn_NT_473009v1 2708 3882 (CGAGG)n 521 + 2708 3882 0 3 451,302,202, 0,492,972, +,+,+, 711914 Simple_repeat Simple_repeat 585 chrUn_NT_473009v1 4815 5437 (CGAGG)n 544 + 4815 5437 0 2 90,332, 0,290, +,+, 711918 Simple_repeat Simple_repeat 585 chrUn_NT_473010v1 2535 3926 GGLTR7-int 348 + 2535 3926 0 3 88,238,278, 0,90,1113, +,+,+, 711928 LTR ERV1 585 chrUn_NT_473012v1 3707 4331 CR1-H 681 + 3707 4331 0 2 479,139, 0,485, +,+, 711939 LINE CR1 585 chrUn_NT_473013v1 3395 4082 (CGAGG)n 509 + 3395 4082 0 2 493,179, 0,508, +,+, 711946 Simple_repeat Simple_repeat 585 chrUn_NT_473014v1 1617 2436 GGXHOI 417 - 1617 2436 0 2 307,491, 0,328, -,-, 711956 Satellite W-chromosome 585 chrUn_NT_473014v1 3405 4227 GGXHOI 410 - 3405 4227 0 2 307,494, 0,328, -,-, 711960 Satellite W-chromosome 585 chrUn_NT_473014v1 4265 5394 GGXHOI 389 - 4265 5394 0 2 691,419, 0,710, -,-, 711962 Satellite W-chromosome 585 chrUn_NT_473014v1 5412 6007 GGXHOI 434 - 5412 6007 0 2 307,267, 0,328, -,-, 711964 Satellite W-chromosome 585 chrUn_NT_473016v1 3020 4611 GGXHOI 416 + 3020 4611 0 4 976,163,192,160, 0,1002,1202,1431, +,+,+,+, 711990 Satellite W-chromosome 585 chrUn_NT_473019v1 5376 6002 CR1-D 758 + 5376 6002 0 2 327,279, 0,347, +,+, 712013 LINE CR1 585 chrUn_NT_473024v1 460 2533 GGXHOI 578 - 460 2533 0 5 403,28,13,48,247, 0,716,1096,1735,1826, -,-,-,-,-, 712062 Satellite W-chromosome 585 chrUn_NT_473024v1 3561 5995 GGXHOI 563 - 3561 5995 0 5 245,294,148,121,140, 0,1010,1315,2152,2294, -,-,-,-,-, 712068 Satellite W-chromosome 585 chrUn_NT_473026v1 3309 3718 (ACCCCATAGGG)n 312 + 3309 3718 0 2 214,136, 0,273, +,+, 712081 Satellite Satellite 585 chrUn_NT_473029v1 4186 4251 (T)n 873 + 4186 4251 0 2 26,18, 0,47, +,+, 712097 Simple_repeat Simple_repeat 585 chrUn_NT_473030v1 3438 4488 GGXHOI 373 - 3438 4488 0 2 515,472, 0,578, -,-, 712113 Satellite W-chromosome 585 chrUn_NT_473031v1 5515 5610 (TCCCC)n 334 + 5515 5610 0 2 6,59, 0,36, +,+, 712128 Simple_repeat Simple_repeat 585 chrUn_NT_473033v1 3068 3915 Z-REP 525 + 3068 3915 0 2 441,322, 0,525, +,+, 712137 Satellite macro 585 chrUn_NT_473034v1 2235 3499 GGXHOI 330 - 2235 3499 0 2 297,952, 0,312, -,-, 712140 Satellite W-chromosome 585 chrUn_NT_473034v1 3580 4910 GGXHOI 376 - 3580 4910 0 2 532,781, 0,549, -,-, 712141 Satellite W-chromosome 585 chrUn_NT_473035v1 755 3839 GGXHOI 381 - 755 3839 0 3 1260,1302,450, 0,1320,2634, -,-,-, 712144 Satellite W-chromosome 585 chrUn_NT_473035v1 3989 5966 GGXHOI 363 - 3989 5966 0 2 756,1209, 0,768, -,-, 712145 Satellite W-chromosome 585 chrUn_NT_473036v1 584 2030 GGXHOI 342 - 584 2030 0 3 223,851,312, 0,260,1134, -,-,-, 712148 Satellite W-chromosome 585 chrUn_NT_473036v1 2232 4671 GGXHOI 395 - 2232 4671 0 4 171,303,1740,140, 0,226,543,2299, -,-,-,-, 712149 Satellite W-chromosome 585 chrUn_NT_473039v1 191 3409 CR1-F 580 + 191 3409 0 10 180,176,188,200,203,203,204,155,194,172, 0,223,444,669,1170,1415,1660,2130,2575,3046, +,+,+,+,+,+,+,+,+,+, 712162 LINE CR1 585 chrUn_NT_473039v1 3453 5974 CR1-F 553 + 3453 5974 0 8 174,190,197,201,202,204,155,173, 0,219,451,946,1189,1433,1905,2348, +,+,+,+,+,+,+,+, 712167 LINE CR1 585 chrUn_NT_473041v1 5050 5934 (ATGGTG)n 356 + 5050 5934 0 2 534,339, 0,545, +,+, 712173 Simple_repeat Simple_repeat 585 chrUn_NT_473044v1 3986 4178 GA-rich 392 + 3986 4178 0 2 39,127, 0,65, +,+, 712196 Low_complexity Low_complexity 585 chrUn_NT_473045v1 3872 5895 GGXHOI 391 + 3872 5895 0 3 395,1450,143, 0,411,1880, +,+,+, 712207 Satellite W-chromosome 585 chrUn_NT_473048v1 5657 5967 CR1-H 628 - 5657 5967 0 2 117,193, 0,117, -,-, 712234 LINE CR1 585 chrUn_NT_473052v1 2374 3091 GGXHOI 331 + 2374 3091 0 4 267,131,74,143, 0,311,457,574, +,+,+,+, 712242 Satellite W-chromosome 585 chrUn_NT_473052v1 3307 5765 GGXHOI 353 + 3307 5765 0 5 646,462,213,662,382, 0,663,1158,1401,2076, +,+,+,+,+, 712243 Satellite W-chromosome 585 chrUn_NT_473053v1 4169 5758 GGXHOI 437 - 4169 5758 0 3 444,231,830, 0,471,759, -,-,-, 712246 Satellite W-chromosome 585 chrUn_NT_473058v1 5043 5959 GGXHOI 582 - 5043 5959 0 2 518,131, 0,785, -,-, 712290 Satellite W-chromosome 585 chrUn_NT_473059v1 1979 4303 GGXHOI 455 - 1979 4303 0 2 2102,164, 0,2160, -,-, 712293 Satellite W-chromosome 585 chrUn_NT_473060v1 4136 4638 GGXHOI 411 - 4136 4638 0 2 145,340, 0,162, -,-, 712297 Satellite W-chromosome 585 chrUn_NT_473061v1 1285 2141 GGXHOI 418 - 1285 2141 0 2 571,270, 0,586, -,-, 712301 Satellite W-chromosome 585 chrUn_NT_473061v1 2841 4091 GGXHOI 414 - 2841 4091 0 2 570,664, 0,586, -,-, 712303 Satellite W-chromosome 585 chrUn_NT_473061v1 4188 5329 GGXHOI 391 - 4188 5329 0 3 221,532,356, 0,233,785, -,-,-, 712304 Satellite W-chromosome 585 chrUn_NT_473063v1 688 5934 GGXHOI 429 + 688 5934 0 4 1230,1743,2060,142, 0,1251,3005,5104, +,+,+,+, 712309 Satellite W-chromosome 585 chrUn_NT_473065v1 145 972 (CGAGG)n 485 + 145 972 0 3 181,313,265, 0,198,562, +,+,+, 712312 Simple_repeat Simple_repeat 585 chrUn_NT_473065v1 1148 1663 (CGAGG)n 525 + 1148 1663 0 2 172,309, 0,206, +,+, 712314 Simple_repeat Simple_repeat 585 chrUn_NT_473065v1 2461 3354 (CGAGG)n 488 + 2461 3354 0 2 318,549, 0,344, +,+, 712319 Simple_repeat Simple_repeat 585 chrUn_NT_473065v1 3755 4474 (CGAGG)n 517 + 3755 4474 0 3 184,178,318, 0,198,401, +,+,+, 712322 Simple_repeat Simple_repeat 585 chrUn_NT_473065v1 4816 5567 (CGAGG)n 508 + 4816 5567 0 3 360,176,182, 0,379,569, +,+,+, 712325 Simple_repeat Simple_repeat 585 chrUn_NT_473066v1 2122 4662 GGXHOI 389 - 2122 4662 0 3 319,480,1708, 0,338,832, -,-,-, 712330 Satellite W-chromosome 585 chrUn_NT_473069v1 3341 4714 GGXHOI 328 + 3341 4714 0 6 162,174,266,256,162,130, 0,209,416,731,1042,1243, +,+,+,+,+,+, 712347 Satellite W-chromosome 585 chrUn_NT_473069v1 4802 5903 GGXHOI 273 + 4802 5903 0 3 160,690,169, 0,207,932, +,+,+, 712348 Satellite W-chromosome 585 chrUn_NT_473070v1 2649 5946 GGXHOI 568 - 2649 5946 0 2 2054,258, 0,3039, -,-, 712351 Satellite W-chromosome 585 chrUn_NT_473073v1 1653 1936 (ACCCCATAGGG)n 458 - 1653 1936 0 2 135,120, 0,163, -,-, 712375 Satellite Satellite 585 chrUn_NT_473073v1 2426 2724 (ACCCCATAGGG)n 352 - 2426 2724 0 2 122,176, 0,122, -,-, 712378 Satellite Satellite 585 chrUn_NT_473073v1 2827 3535 (ACCCCATAGGG)n 372 - 2827 3535 0 4 134,120,112,245, 0,161,292,463, -,-,-,-, 712379 Satellite Satellite 585 chrUn_NT_473073v1 3941 4277 (ACCCCATAGGG)n 386 + 3941 4277 0 2 140,81, 0,255, +,+, 712381 Satellite Satellite 585 chrUn_NT_473073v1 4769 5065 (ACCCCATAGGG)n 346 - 4769 5065 0 2 122,174, 0,122, -,-, 712385 Satellite Satellite 585 chrUn_NT_473074v1 339 663 (CGAGG)n 514 + 339 663 0 2 180,123, 0,201, +,+, 712391 Simple_repeat Simple_repeat 585 chrUn_NT_473074v1 746 2050 (CGAGG)n 511 + 746 2050 0 3 501,362,399, 0,518,905, +,+,+, 712393 Simple_repeat Simple_repeat 585 chrUn_NT_473074v1 2461 3161 (CGAGG)n 538 + 2461 3161 0 2 294,385, 0,315, +,+, 712396 Simple_repeat Simple_repeat 585 chrUn_NT_473074v1 3280 4823 (CGAGG)n 535 + 3280 4823 0 4 253,60,620,373, 0,430,531,1170, +,+,+,+, 712398 Simple_repeat Simple_repeat 585 chrUn_NT_473074v1 5111 5946 (CGAGG)n 555 + 5111 5946 0 2 372,463, 0,372, +,+, 712404 Simple_repeat Simple_repeat 585 chrUn_NT_473076v1 1110 1491 (CGAGG)n 517 + 1110 1491 0 2 169,177, 0,204, +,+, 712415 Simple_repeat Simple_repeat 585 chrUn_NT_473076v1 1559 2650 (CGAGG)n 518 + 1559 2650 0 2 182,855, 0,236, +,+, 712417 Simple_repeat Simple_repeat 585 chrUn_NT_473076v1 3089 3865 (CGAGG)n 509 + 3089 3865 0 3 307,181,184, 0,364,592, +,+,+, 712419 Simple_repeat Simple_repeat 585 chrUn_NT_473076v1 4062 5206 (CGAGG)n 522 + 4062 5206 0 4 325,139,42,390, 0,374,696,754, +,+,+,+, 712420 Simple_repeat Simple_repeat 585 chrUn_NT_473077v1 2278 5734 GGXHOI 385 - 2278 5734 0 4 757,1626,190,835, 0,778,2419,2621, -,-,-,-, 712425 Satellite W-chromosome 585 chrUn_NT_473078v1 1787 2334 GGXHOI 350 + 1787 2334 0 2 131,378, 0,169, +,+, 712429 Satellite W-chromosome 585 chrUn_NT_473078v1 3596 4810 GGXHOI 336 + 3596 4810 0 2 402,786, 0,428, +,+, 712433 Satellite W-chromosome 585 chrUn_NT_473079v1 668 1204 (ACCCATAGGG)n 395 - 668 1204 0 4 116,115,115,115, 0,131,271,421, -,-,-,-, 712440 Satellite Satellite 585 chrUn_NT_473079v1 1238 1544 (ACCCATAGGG)n 411 - 1238 1544 0 2 117,165, 0,141, -,-, 712442 Satellite Satellite 585 chrUn_NT_473079v1 1647 1808 (ACCCCATAGGG)n 476 + 1647 1808 0 2 120,41, 0,120, +,+, 712444 Satellite Satellite 585 chrUn_NT_473080v1 55 913 (CAAGG)n 635 + 55 913 0 2 235,620, 0,238, +,+, 712470 Simple_repeat Simple_repeat 585 chrUn_NT_473080v1 968 1357 (CAAGG)n 641 + 968 1357 0 2 185,204, 0,185, +,+, 712472 Simple_repeat Simple_repeat 585 chrUn_NT_473080v1 2132 2731 (CAAGG)n 650 + 2132 2731 0 3 155,39,229, 0,331,370, +,+,+, 712478 Simple_repeat Simple_repeat 585 chrUn_NT_473080v1 3179 3867 (CAAGG)n 631 + 3179 3867 0 3 67,231,220, 0,237,468, +,+,+, 712483 Simple_repeat Simple_repeat 585 chrUn_NT_473080v1 3790 4404 (CAGGC)n 494 + 3790 4404 0 2 204,51, 0,563, +,+, 712485 Simple_repeat Simple_repeat 585 chrUn_NT_473080v1 4433 5942 (CAAGG)n 637 + 4433 5942 0 5 181,202,363,360,332, 0,184,412,787,1177, +,+,+,+,+, 712488 Simple_repeat Simple_repeat 585 chrUn_NT_473081v1 603 1285 GGXHOI 419 - 603 1285 0 3 151,150,273, 0,202,409, -,-,-, 712490 Satellite W-chromosome 585 chrUn_NT_473081v1 1829 2239 GGXHOI 386 - 1829 2239 0 2 255,141, 0,269, -,-, 712492 Satellite W-chromosome 585 chrUn_NT_473081v1 3792 5020 GGXHOI 350 - 3792 5020 0 4 563,309,133,157, 0,578,915,1071, -,-,-,-, 712495 Satellite W-chromosome 585 chrUn_NT_473081v1 5130 5941 GGXHOI 385 - 5130 5941 0 2 204,590, 0,221, -,-, 712496 Satellite W-chromosome 585 chrUn_NT_473082v1 4843 5937 GGXHOI 397 - 4843 5937 0 3 687,240,69, 0,741,1025, -,-,-, 712505 Satellite W-chromosome 585 chrUn_NT_473084v1 1810 1911 (C)n 846 + 1810 1911 0 2 36,20, 0,81, +,+, 712509 Simple_repeat Simple_repeat 585 chrUn_NT_473084v1 3086 3758 (CTCTATGGGG)n 301 - 3086 3758 0 4 138,138,138,139, 0,178,355,533, -,-,-,-, 712515 Satellite Satellite 585 chrUn_NT_473086v1 3932 5903 GGXHOI 383 - 3932 5903 0 2 1773,147, 0,1824, -,-, 712524 Satellite W-chromosome 585 chrUn_NT_473087v1 313 2777 GGERVL-B-int 691 - 313 2777 0 6 188,446,670,293,68,317, 0,277,723,1421,1714,2147, -,-,-,-,-,-, 712527 LTR ERVL 585 chrUn_NT_473087v1 5162 5936 GGLTR7A 827 - 5162 5936 0 2 591,174, 0,600, -,-, 712531 LTR ERV1 585 chrUn_NT_473089v1 4324 4955 (ACCCATAGGG)n 399 - 4324 4955 0 4 129,113,109,152, 0,174,328,479, -,-,-,-, 712535 Satellite Satellite 585 chrUn_NT_473091v1 3951 4355 (GGATG)n 648 + 3951 4355 0 2 180,188, 0,216, +,+, 712544 Simple_repeat Simple_repeat 585 chrUn_NT_473093v1 974 3082 GGXHOI 411 - 974 3082 0 3 1308,359,393, 0,1322,1715, -,-,-, 712557 Satellite W-chromosome 585 chrUn_NT_473093v1 3191 5930 GGXHOI 410 - 3191 5930 0 6 227,55,143,789,745,642, 0,242,310,510,1339,2097, -,-,-,-,-,-, 712558 Satellite W-chromosome 585 chrUn_NT_473095v1 2237 3312 (CCCTAA)n 569 + 2237 3312 0 2 174,857, 0,218, +,+, 712572 Simple_repeat Simple_repeat 585 chrUn_NT_473095v1 4642 5930 (CCCTAA)n 622 + 4642 5930 0 5 206,186,414,48,175, 0,222,408,1023,1113, +,+,+,+,+, 712578 Simple_repeat Simple_repeat 585 chrUn_NT_473096v1 1824 2110 (ACCCATAGGG)n 493 + 1824 2110 0 2 153,119, 0,167, +,+, 712588 Satellite Satellite 585 chrUn_NT_473097v1 3058 3294 (ACCCCATAGGG)n 482 - 3058 3294 0 2 94,23, 0,213, -,-, 712601 Satellite Satellite 585 chrUn_NT_473097v1 3658 4137 (ACCCCATAGGG)n 502 - 3658 4137 0 2 284,74, 0,405, -,-, 712605 Satellite Satellite 585 chrUn_NT_473099v1 1294 1612 (CTCTATGGGG)n 466 + 1294 1612 0 2 151,116, 0,202, +,+, 712614 Satellite Satellite 585 chrUn_NT_473099v1 2243 3155 (CTCTATGGGG)n 642 + 2243 3155 0 6 124,126,134,93,122,105, 0,186,350,520,648,807, +,+,+,+,+,+, 712619 Satellite Satellite 585 chrUn_NT_473099v1 3194 3370 (CTATGGGGCG)n 750 + 3194 3370 0 2 63,62, 0,114, +,+, 712620 Simple_repeat Simple_repeat 585 chrUn_NT_473099v1 4476 4936 (CTCTATGGGG)n 630 + 4476 4936 0 3 124,122,116, 0,173,344, +,+,+, 712628 Satellite Satellite 585 chrUn_NT_473099v1 5527 5771 (CTCTATGGGG)n 623 + 5527 5771 0 2 116,93, 0,151, +,+, 712633 Satellite Satellite 585 chrUn_NT_473102v1 4076 5011 GGXHOI 373 - 4076 5011 0 3 202,171,510, 0,217,425, -,-,-, 712644 Satellite W-chromosome 585 chrUn_NT_473102v1 5569 5922 GGXHOI 269 - 5569 5922 0 2 124,174, 0,179, -,-, 712646 Satellite W-chromosome 585 chrUn_NT_473103v1 1443 3412 GGLTR7-int 629 - 1443 3412 0 3 35,50,1255, 0,35,714, -,-,-, 712649 LTR ERV1 585 chrUn_NT_473106v1 691 3071 (CGAGG)n 516 + 691 3071 0 6 625,695,189,392,181,172, 0,643,1390,1593,2013,2208, +,+,+,+,+,+, 712656 Simple_repeat Simple_repeat 585 chrUn_NT_473106v1 3984 4569 (CGAGG)n 488 + 3984 4569 0 2 174,363, 0,222, +,+, 712664 Simple_repeat Simple_repeat 585 chrUn_NT_473106v1 4921 5337 (CGAGG)n 510 + 4921 5337 0 2 183,173, 0,243, +,+, 712668 Simple_repeat Simple_repeat 585 chrUn_NT_473107v1 474 896 Sat-CR1_GG 126 - 474 896 0 2 106,57, 0,365, -,-, 712673 Satellite Satellite 585 chrUn_NT_473107v1 4730 5258 Sat-CR1_GG 164 - 4730 5258 0 2 105,164, 0,364, -,-, 712691 Satellite Satellite 585 chrUn_NT_473108v1 630 2391 GGXHOI 392 + 630 2391 0 3 333,1116,260, 0,373,1501, +,+,+, 712698 Satellite W-chromosome 585 chrUn_NT_473108v1 2475 3418 GGXHOI 484 + 2475 3418 0 3 137,489,264, 0,175,679, +,+,+, 712699 Satellite W-chromosome 585 chrUn_NT_473108v1 3694 5777 GGXHOI 386 + 3694 5777 0 3 165,1577,271, 0,219,1812, +,+,+, 712700 Satellite W-chromosome 585 chrUn_NT_473109v1 244 882 (TTAGGG)n 677 + 244 882 0 2 182,444, 0,194, +,+, 712703 Simple_repeat Simple_repeat 585 chrUn_NT_473109v1 941 1585 (TTAGGG)n 479 + 941 1585 0 2 209,402, 0,242, +,+, 712705 Simple_repeat Simple_repeat 585 chrUn_NT_473109v1 1847 2229 (TTAGGG)n 698 + 1847 2229 0 2 157,40, 0,342, +,+, 712709 Simple_repeat Simple_repeat 585 chrUn_NT_473109v1 2304 3212 (TTAGGG)n 578 + 2304 3212 0 4 81,99,357,188, 0,247,363,720, +,+,+,+, 712712 Simple_repeat Simple_repeat 585 chrUn_NT_473109v1 3299 4322 (TTAGGG)n 643 + 3299 4322 0 3 418,302,281, 0,429,742, +,+,+, 712715 Simple_repeat Simple_repeat 585 chrUn_NT_473109v1 4363 5917 (TTAGGG)n 591 + 4363 5917 0 7 174,147,63,188,190,243,227, 0,195,536,640,840,1030,1327, +,+,+,+,+,+,+, 712717 Simple_repeat Simple_repeat 585 chrUn_NT_473110v1 471 2587 GGXHOI 429 - 471 2587 0 2 1169,931, 0,1185, -,-, 712720 Satellite W-chromosome 585 chrUn_NT_473110v1 2723 3917 GGXHOI 373 - 2723 3917 0 2 259,919, 0,275, -,-, 712721 Satellite W-chromosome 585 chrUn_NT_473110v1 4771 5819 GGXHOI 377 - 4771 5819 0 2 736,294, 0,754, -,-, 712723 Satellite W-chromosome 585 chrUn_NT_473111v1 808 1041 (CCCCATTGGG)n 378 + 808 1041 0 2 87,30, 0,203, +,+, 712726 Satellite Satellite 585 chrUn_NT_473111v1 1023 2063 (ACCCATTGGG)n 512 + 1023 2063 0 4 220,58,337,239, 0,334,452,801, +,+,+,+, 712728 Satellite Satellite 585 chrUn_NT_473111v1 2094 3377 (ACCCATTGGG)n 487 + 2094 3377 0 6 138,119,128,474,130,100, 0,180,310,459,935,1183, +,+,+,+,+,+, 712731 Satellite Satellite 585 chrUn_NT_473111v1 3159 3427 (CCCCATTGGG)n 373 + 3159 3427 0 2 118,118, 0,150, +,+, 712732 Satellite Satellite 585 chrUn_NT_473111v1 3408 5467 (ACCCATTGGG)n 515 + 3408 5467 0 7 148,359,348,117,119,659,70, 0,170,551,921,1050,1211,1989, +,+,+,+,+,+,+, 712733 Satellite Satellite 585 chrUn_NT_473114v1 653 1856 GGXHOI 411 + 653 1856 0 2 202,979, 0,224, +,+, 712751 Satellite W-chromosome 585 chrUn_NT_473114v1 2566 3762 GGXHOI 401 + 2566 3762 0 3 365,492,302, 0,381,894, +,+,+, 712753 Satellite W-chromosome 585 chrUn_NT_473115v1 4379 4717 CR1-C4 526 - 4379 4717 0 2 146,143, 0,195, -,-, 712762 LINE CR1 585 chrUn_NT_473116v1 68 1220 (CTCTATGGGG)n 294 - 68 1220 0 2 99,109, 0,1043, -,-, 712766 Satellite Satellite 585 chrUn_NT_473117v1 911 2250 (CGAGG)n 485 + 911 2250 0 4 174,677,179,175, 0,229,940,1164, +,+,+,+, 712777 Simple_repeat Simple_repeat 585 chrUn_NT_473117v1 2852 3977 (CGAGG)n 503 + 2852 3977 0 3 341,209,515, 0,354,610, +,+,+, 712781 Simple_repeat Simple_repeat 585 chrUn_NT_473118v1 1271 2672 GGXHOI 364 + 1271 2672 0 2 1078,262, 0,1139, +,+, 712791 Satellite W-chromosome 585 chrUn_NT_473118v1 3899 4944 GGXHOI 373 + 3899 4944 0 2 466,516, 0,529, +,+, 712794 Satellite W-chromosome 585 chrUn_NT_473119v1 599 939 GGXHOI 610 + 599 939 0 2 30,17, 0,323, +,+, 712798 Satellite W-chromosome 585 chrUn_NT_473119v1 1009 4105 GGXHOI 570 + 1009 4105 0 6 202,300,290,300,290,299, 0,453,1084,1625,2256,2797, +,+,+,+,+,+, 712800 Satellite W-chromosome 585 chrUn_NT_473119v1 4522 5037 GGXHOI 458 + 4522 5037 0 2 324,140, 0,375, +,+, 712807 Satellite W-chromosome 585 chrUn_NT_473122v1 401 730 (CGAGG)n 497 + 401 730 0 2 141,177, 0,152, +,+, 712825 Simple_repeat Simple_repeat 585 chrUn_NT_473122v1 1986 3221 (CGAGG)n 539 + 1986 3221 0 3 180,266,597, 0,201,638, +,+,+, 712835 Simple_repeat Simple_repeat 585 chrUn_NT_473122v1 4406 4715 (CGAGG)n 568 + 4406 4715 0 2 84,44, 0,265, +,+, 712841 Simple_repeat Simple_repeat 585 chrUn_NT_473122v1 4838 5702 (CGAGG)n 545 + 4838 5702 0 3 371,175,268, 0,394,596, +,+,+, 712844 Simple_repeat Simple_repeat 585 chrUn_NT_473123v1 483 1817 GGXHOI 399 - 483 1817 0 5 555,240,219,98,120, 0,566,828,1061,1214, -,-,-,-,-, 712847 Satellite W-chromosome 585 chrUn_NT_473123v1 1891 2831 GGXHOI 378 - 1891 2831 0 3 122,481,256, 0,185,684, -,-,-, 712848 Satellite W-chromosome 585 chrUn_NT_473123v1 2901 3704 GGXHOI 319 - 2901 3704 0 2 649,124, 0,679, -,-, 712849 Satellite W-chromosome 585 chrUn_NT_473123v1 4049 5561 GGXHOI 359 - 4049 5561 0 3 305,1002,151, 0,339,1361, -,-,-, 712851 Satellite W-chromosome 585 chrUn_NT_473126v1 4185 5356 CR1-F 724 - 4185 5356 0 2 295,347, 0,824, -,-, 712862 LINE CR1 585 chrUn_NT_473128v1 1629 1934 (ACCCCATAGGG)n 418 - 1629 1934 0 2 118,125, 0,180, -,-, 712879 Satellite Satellite 585 chrUn_NT_473129v1 4877 5488 CR1-H 623 - 4877 5488 0 2 138,454, 0,157, -,-, 712885 LINE CR1 585 chrUn_NT_473131v1 5593 5838 (CTCTATGGGG)n 446 - 5593 5838 0 2 89,20, 0,225, -,-, 712894 Satellite Satellite 585 chrUn_NT_473132v1 1371 3115 GGERVL-A-int 740 + 1371 3115 0 2 454,1290, 0,454, +,+, 712897 LTR ERVL 585 chrUn_NT_473133v1 322 2892 GGXHOI 361 - 322 2892 0 2 729,1820, 0,750, -,-, 712903 Satellite W-chromosome 585 chrUn_NT_473133v1 4822 5881 GGXHOI 385 - 4822 5881 0 2 457,573, 0,486, -,-, 712907 Satellite W-chromosome 585 chrUn_NT_473136v1 1583 3384 (TTGGGG)n 702 + 1583 3384 0 4 180,487,42,686, 0,192,1043,1115, +,+,+,+, 712928 Simple_repeat Simple_repeat 585 chrUn_NT_473139v1 1369 2137 GGXHOI 370 - 1369 2137 0 2 408,342, 0,426, -,-, 712950 Satellite W-chromosome 585 chrUn_NT_473139v1 3898 5879 GGXHOI 327 - 3898 5879 0 3 220,615,1105, 0,238,876, -,-,-, 712954 Satellite W-chromosome 585 chrUn_NT_473140v1 1082 1976 GGXHOI 388 + 1082 1976 0 2 411,463, 0,431, +,+, 712956 Satellite W-chromosome 585 chrUn_NT_473140v1 2170 3838 GGXHOI 372 + 2170 3838 0 2 275,1378, 0,290, +,+, 712957 Satellite W-chromosome 585 chrUn_NT_473140v1 3997 5539 GGXHOI 397 + 3997 5539 0 3 389,105,1012, 0,405,530, +,+,+, 712958 Satellite W-chromosome 585 chrUn_NT_473142v1 2557 3653 (ACCCCATAGGG)n 627 - 2557 3653 0 4 172,84,138,363, 0,439,558,733, -,-,-,-, 712963 Satellite Satellite 585 chrUn_NT_473143v1 78 909 (CGAGG)n 506 + 78 909 0 3 362,239,180, 0,401,651, +,+,+, 712973 Simple_repeat Simple_repeat 585 chrUn_NT_473143v1 990 1523 (CGAGG)n 555 + 990 1523 0 2 183,305, 0,228, +,+, 712975 Simple_repeat Simple_repeat 585 chrUn_NT_473143v1 4228 4643 (CGAGG)n 498 + 4228 4643 0 2 185,178, 0,237, +,+, 712988 Simple_repeat Simple_repeat 585 chrUn_NT_473144v1 4174 5136 GGXHOI 387 + 4174 5136 0 2 385,514, 0,448, +,+, 712998 Satellite W-chromosome 585 chrUn_NT_473145v1 2408 2882 (CATTG)n 372 + 2408 2882 0 2 100,24, 0,450, +,+, 713006 Simple_repeat Simple_repeat 585 chrUn_NT_473145v1 2637 3172 (CTGTG)n 248 + 2637 3172 0 2 248,117, 0,418, +,+, 713008 Simple_repeat Simple_repeat 585 chrUn_NT_473145v1 4083 4441 CR1-F2 376 + 4083 4441 0 2 87,268, 0,90, +,+, 713011 LINE CR1 585 chrUn_NT_473146v1 717 890 (GTTATTTCC)n 837 + 717 890 0 2 66,53, 0,120, +,+, 713015 Simple_repeat Simple_repeat 585 chrUn_NT_473146v1 3526 3700 (GTTATTTCC)n 820 + 3526 3700 0 2 66,53, 0,121, +,+, 713023 Simple_repeat Simple_repeat 585 chrUn_NT_473147v1 3696 5884 GGLTR7-int 491 + 3696 5884 0 3 312,1127,692, 0,361,1496, +,+,+, 713040 LTR ERV1 585 chrUn_NT_473148v1 2215 2665 GGXHOI 304 + 2215 2665 0 2 223,215, 0,235, +,+, 713043 Satellite W-chromosome 585 chrUn_NT_473148v1 2756 3626 GGXHOI 301 + 2756 3626 0 3 364,253,214, 0,385,656, +,+,+, 713044 Satellite W-chromosome 585 chrUn_NT_473149v1 4161 4296 GA-rich 330 + 4161 4296 0 2 12,63, 0,72, +,+, 713056 Low_complexity Low_complexity 585 chrUn_NT_473150v1 2480 3449 GGXHOI 401 - 2480 3449 0 2 340,614, 0,355, -,-, 713061 Satellite W-chromosome 585 chrUn_NT_473150v1 3520 5881 GGXHOI 471 - 3520 5881 0 2 2071,261, 0,2100, -,-, 713062 Satellite W-chromosome 585 chrUn_NT_473154v1 2268 3337 GGXHOI 360 - 2268 3337 0 2 887,131, 0,938, -,-, 713069 Satellite W-chromosome 585 chrUn_NT_473154v1 3420 3663 GGXHOI 362 - 3420 3663 0 2 92,134, 0,109, -,-, 713070 Satellite W-chromosome 585 chrUn_NT_473156v1 2581 5867 GGXHOI 403 - 2581 5867 0 12 417,236,629,131,162,58,156,164,217,183,346,281, 0,432,682,1322,1495,1668,1741,1957,2137,2372,2612,3005, -,-,-,-,-,-,-,-,-,-,-,-, 713080 Satellite W-chromosome 585 chrUn_NT_473157v1 2077 3806 (CCTCG)n 550 + 2077 3806 0 5 507,254,66,299,192, 0,537,978,1055,1537, +,+,+,+,+, 713087 Simple_repeat Simple_repeat 585 chrUn_NT_473157v1 3845 5871 GGLTR10D-int 925 + 3845 5871 0 2 1847,176, 0,1850, +,+, 713091 LTR ERVK 585 chrUn_NT_473158v1 620 1271 GGXHOI 361 + 620 1271 0 2 275,362, 0,289, +,+, 713093 Satellite W-chromosome 585 chrUn_NT_473158v1 1360 1894 GGXHOI 331 + 1360 1894 0 2 330,159, 0,375, +,+, 713094 Satellite W-chromosome 585 chrUn_NT_473158v1 1972 2244 GGXHOI 401 + 1972 2244 0 2 126,135, 0,137, +,+, 713095 Satellite W-chromosome 585 chrUn_NT_473158v1 2713 3111 GGXHOI 442 + 2713 3111 0 2 216,124, 0,274, +,+, 713097 Satellite W-chromosome 585 chrUn_NT_473158v1 3175 5242 GGXHOI 391 + 3175 5242 0 6 129,187,257,453,289,569, 0,171,374,679,1147,1498, +,+,+,+,+,+, 713098 Satellite W-chromosome 585 chrUn_NT_473158v1 5517 5870 GGXHOI 365 + 5517 5870 0 2 164,135, 0,218, +,+, 713099 Satellite W-chromosome 585 chrUn_NT_473160v1 2873 5867 GGXHOI 346 - 2873 5867 0 5 703,447,200,991,574, 0,724,1192,1406,2420, -,-,-,-,-, 713104 Satellite W-chromosome 585 chrUn_NT_473163v1 1661 3783 GGXHOI 376 - 1661 3783 0 5 382,434,505,378,311, 0,422,904,1422,1811, -,-,-,-,-, 713112 Satellite W-chromosome 585 chrUn_NT_473163v1 3851 4990 GGXHOI 364 - 3851 4990 0 2 607,493, 0,646, -,-, 713113 Satellite W-chromosome 585 chrUn_NT_473166v1 1190 3270 Z-REP 499 - 1190 3270 0 2 69,131, 0,1949, -,-, 713132 Satellite macro 585 chrUn_NT_473167v1 4581 4750 (AACAACGGA)n 965 + 4581 4750 0 2 50,68, 0,101, +,+, 713151 Simple_repeat Simple_repeat 585 chrUn_NT_473168v1 981 1390 (CAGGC)n 541 + 981 1390 0 2 213,196, 0,213, +,+, 713160 Simple_repeat Simple_repeat 585 chrUn_NT_473168v1 2043 3102 (CAAGG)n 594 + 2043 3102 0 4 203,291,89,232, 0,244,713,827, +,+,+,+, 713167 Simple_repeat Simple_repeat 585 chrUn_NT_473168v1 4000 5830 (CAAGG)n 590 + 4000 5830 0 7 275,317,212,224,160,25,182, 0,449,766,978,1239,1586,1648, +,+,+,+,+,+,+, 713176 Simple_repeat Simple_repeat 585 chrUn_NT_473171v1 5212 5857 GGLTR11-int 430 + 5212 5857 0 2 106,80, 0,565, +,+, 713215 LTR ERV1 585 chrUn_NT_473174v1 1349 5422 GGXHOI 574 + 1349 5422 0 2 488,268, 0,3805, +,+, 713245 Satellite W-chromosome 585 chrUn_NT_473174v1 5529 5855 GGXHOI 560 + 5529 5855 0 2 17,33, 0,293, +,+, 713248 Satellite W-chromosome 585 chrUn_NT_473177v1 5507 5759 (ACCCATAGGG)n 376 + 5507 5759 0 2 111,112, 0,140, +,+, 713289 Satellite Satellite 585 chrUn_NT_473178v1 1835 2956 GGXHOI 389 + 1835 2956 0 2 231,872, 0,249, +,+, 713292 Satellite W-chromosome 585 chrUn_NT_473181v1 293 2773 GGXHOI 550 - 293 2773 0 3 330,407,707, 0,993,1773, -,-,-, 713300 Satellite W-chromosome 585 chrUn_NT_473181v1 2793 5840 GGXHOI 582 - 2793 5840 0 3 496,145,40, 0,2033,3007, -,-,-, 713304 Satellite W-chromosome 585 chrUn_NT_473186v1 1149 1954 (CGAGG)n 613 + 1149 1954 0 3 182,225,392, 0,188,413, +,+,+, 713328 Simple_repeat Simple_repeat 585 chrUn_NT_473186v1 2028 3347 (CGAGG)n 580 + 2028 3347 0 5 179,181,178,475,180, 0,209,422,644,1139, +,+,+,+,+, 713329 Simple_repeat Simple_repeat 585 chrUn_NT_473186v1 3417 4223 (CGAGG)n 574 + 3417 4223 0 2 157,470, 0,336, +,+, 713330 Simple_repeat Simple_repeat 585 chrUn_NT_473186v1 4204 5141 (CGAGG)n 572 + 4204 5141 0 3 216,210,273, 0,267,664, +,+,+, 713333 Simple_repeat Simple_repeat 585 chrUn_NT_473186v1 5232 5838 (CGAGG)n 562 + 5232 5838 0 2 184,412, 0,194, +,+, 713336 Simple_repeat Simple_repeat 585 chrUn_NT_473188v1 704 1097 GGXHOI 379 - 704 1097 0 2 164,177, 0,216, -,-, 713340 Satellite W-chromosome 585 chrUn_NT_473188v1 1490 3163 GGXHOI 368 - 1490 3163 0 5 316,211,410,463,152, 0,364,590,1042,1521, -,-,-,-,-, 713342 Satellite W-chromosome 585 chrUn_NT_473188v1 3249 4194 GGXHOI 389 - 3249 4194 0 4 134,100,246,361, 0,181,324,584, -,-,-,-, 713343 Satellite W-chromosome 585 chrUn_NT_473188v1 5078 5839 GGXHOI 449 - 5078 5839 0 3 495,59,157, 0,511,604, -,-,-, 713346 Satellite W-chromosome 585 chrUn_NT_473190v1 2695 3449 GGXHOI 360 + 2695 3449 0 4 122,137,181,204, 0,170,322,550, +,+,+,+, 713357 Satellite W-chromosome 585 chrUn_NT_473190v1 3815 4227 GGXHOI 380 + 3815 4227 0 2 190,176, 0,236, +,+, 713359 Satellite W-chromosome 585 chrUn_NT_473190v1 4730 5782 GGXHOI 360 + 4730 5782 0 4 127,328,287,216, 0,183,528,836, +,+,+,+, 713361 Satellite W-chromosome 585 chrUn_NT_473191v1 1803 2328 (CTCTATGGGG)n 513 - 1803 2328 0 3 167,134,106, 0,167,419, -,-,-, 713375 Satellite Satellite 585 chrUn_NT_473191v1 2516 3057 (ACCCCATAGGG)n 450 - 2516 3057 0 2 132,148, 0,393, -,-, 713379 Satellite Satellite 585 chrUn_NT_473191v1 4550 4777 (CTCTATGGGG)n 438 + 4550 4777 0 2 64,48, 0,179, +,+, 713389 Satellite Satellite 585 chrUn_NT_473191v1 4897 5292 (CTCTATGGGG)n 542 + 4897 5292 0 2 82,199, 0,196, +,+, 713392 Satellite Satellite 585 chrUn_NT_473193v1 1796 2412 GGXHOI 498 - 1796 2412 0 3 96,47,192, 0,363,424, -,-,-, 713407 Satellite W-chromosome 585 chrUn_NT_473193v1 2481 3177 GGXHOI 367 - 2481 3177 0 2 402,233, 0,463, -,-, 713409 Satellite W-chromosome 585 chrUn_NT_473193v1 4623 5645 GGXHOI 558 - 4623 5645 0 2 455,278, 0,744, -,-, 713412 Satellite W-chromosome 585 chrUn_NT_473194v1 1757 5829 GGXHOI 398 - 1757 5829 0 10 135,629,758,311,274,271,386,597,143,339, 0,151,794,1568,1928,2218,2523,2920,3569,3733, -,-,-,-,-,-,-,-,-,-, 713416 Satellite W-chromosome 585 chrUn_NT_473198v1 754 1346 (CGAGG)n 563 + 754 1346 0 3 177,179,181, 0,190,411, +,+,+, 713430 Simple_repeat Simple_repeat 585 chrUn_NT_473198v1 2395 3267 (CGAGG)n 515 + 2395 3267 0 3 173,310,186, 0,357,686, +,+,+, 713436 Simple_repeat Simple_repeat 585 chrUn_NT_473198v1 3353 3852 (CGAGG)n 618 + 3353 3852 0 2 311,177, 0,322, +,+, 713438 Simple_repeat Simple_repeat 585 chrUn_NT_473199v1 841 1295 (CAGGC)n 500 + 841 1295 0 2 150,124, 0,330, +,+, 713449 Simple_repeat Simple_repeat 585 chrUn_NT_473199v1 2051 3016 (CAAGG)n 604 + 2051 3016 0 2 392,562, 0,403, +,+, 713455 Simple_repeat Simple_repeat 585 chrUn_NT_473199v1 3028 3691 (CAAGG)n 618 + 3028 3691 0 2 65,259, 0,404, +,+, 713457 Simple_repeat Simple_repeat 585 chrUn_NT_473199v1 3740 4746 (CAAGG)n 624 + 3740 4746 0 2 233,607, 0,399, +,+, 713461 Simple_repeat Simple_repeat 585 chrUn_NT_473199v1 4788 5188 (CAAGG)n 578 + 4788 5188 0 2 116,103, 0,297, +,+, 713464 Simple_repeat Simple_repeat 585 chrUn_NT_473199v1 5280 5785 (CAAGG)n 640 + 5280 5785 0 2 177,315, 0,190, +,+, 713467 Simple_repeat Simple_repeat 585 chrUn_NT_473201v1 1774 2451 (GGATG)n 706 + 1774 2451 0 2 150,345, 0,332, +,+, 713495 Simple_repeat Simple_repeat 585 chrUn_NT_473201v1 2678 3402 (ACCTG)n 434 + 2678 3402 0 2 274,416, 0,308, +,+, 713497 Simple_repeat Simple_repeat 585 chrUn_NT_473203v1 1566 5808 GGXHOI 316 - 1566 5808 0 5 244,110,2774,752,264, 0,263,419,3211,3978, -,-,-,-,-, 713524 Satellite W-chromosome 585 chrUn_NT_473204v1 4174 4695 (ACCCATAGGG)n 660 - 4174 4695 0 3 87,74,181, 0,203,340, -,-,-, 713532 Satellite Satellite 585 chrUn_NT_473205v1 750 1793 GGXHOI 504 - 750 1793 0 3 170,324,259, 0,185,784, -,-,-, 713539 Satellite W-chromosome 585 chrUn_NT_473205v1 1862 2961 GGXHOI 540 - 1862 2961 0 2 505,205, 0,894, -,-, 713541 Satellite W-chromosome 585 chrUn_NT_473205v1 3038 5329 GGXHOI 534 - 3038 5329 0 5 19,174,371,28,210, 0,327,817,1666,2081, -,-,-,-,-, 713543 Satellite W-chromosome 585 chrUn_NT_473206v1 2440 5809 GGXHOI 424 - 2440 5809 0 5 357,219,262,947,1524, 0,369,603,882,1845, -,-,-,-,-, 713550 Satellite W-chromosome 585 chrUn_NT_473210v1 5381 5822 CR1-H 641 - 5381 5822 0 2 139,297, 0,144, -,-, 713574 LINE CR1 585 chrUn_NT_473211v1 3076 3696 CR1-H 680 - 3076 3696 0 2 139,475, 0,145, -,-, 713578 LINE CR1 585 chrUn_NT_473212v1 3665 5729 GGXHOI 364 - 3665 5729 0 3 381,724,923, 0,397,1141, -,-,-, 713581 Satellite W-chromosome 585 chrUn_NT_473213v1 604 2130 (CCCTAA)n 650 + 604 2130 0 2 1315,174, 0,1352, +,+, 713584 Simple_repeat Simple_repeat 585 chrUn_NT_473213v1 3450 4646 GGXHOI 398 + 3450 4646 0 2 954,230, 0,966, +,+, 713587 Satellite W-chromosome 585 chrUn_NT_473213v1 4773 5790 GGXHOI 320 + 4773 5790 0 3 111,579,268, 0,157,749, +,+,+, 713590 Satellite W-chromosome 585 chrUn_NT_473215v1 209 1670 GGXHOI 375 - 209 1670 0 6 270,444,57,170,207,172, 0,313,774,851,1066,1289, -,-,-,-,-,-, 713604 Satellite W-chromosome 585 chrUn_NT_473215v1 2340 3044 GGXHOI 428 - 2340 3044 0 3 86,160,416, 0,107,288, -,-,-, 713606 Satellite W-chromosome 585 chrUn_NT_473215v1 3932 5817 GGXHOI 439 - 3932 5817 0 7 149,220,58,258,383,219,468, 0,186,418,494,783,1181,1417, -,-,-,-,-,-,-, 713609 Satellite W-chromosome 585 chrUn_NT_473217v1 643 1051 (CTCTATGGGG)n 509 + 643 1051 0 2 156,221, 0,187, +,+, 713619 Satellite Satellite 585 chrUn_NT_473217v1 1132 1523 (ACCCCATAGGG)n 595 - 1132 1523 0 2 139,240, 0,151, -,-, 713620 Satellite Satellite 585 chrUn_NT_473217v1 1956 2198 (CTCTATGGGG)n 410 + 1956 2198 0 2 70,32, 0,210, +,+, 713625 Satellite Satellite 585 chrUn_NT_473217v1 2169 2477 (ACCCCATAGGG)n 546 - 2169 2477 0 2 145,43, 0,265, -,-, 713627 Satellite Satellite 585 chrUn_NT_473217v1 3182 3434 (CTCTATGGGG)n 480 + 3182 3434 0 2 75,20, 0,232, +,+, 713636 Satellite Satellite 585 chrUn_NT_473217v1 3918 5313 (ACCCCATAGGG)n 422 - 3918 5313 0 7 359,153,158,142,51,72,65, 0,402,675,833,975,1146,1330, -,-,-,-,-,-,-, 713640 Satellite Satellite 585 chrUn_NT_473217v1 5525 5704 (CTCTATGGGG)n 376 + 5525 5704 0 2 71,54, 0,125, +,+, 713645 Satellite Satellite 585 chrUn_NT_473223v1 742 1155 (CGAGG)n 486 + 742 1155 0 2 180,180, 0,233, +,+, 713663 Simple_repeat Simple_repeat 585 chrUn_NT_473223v1 2001 2367 (CGAGG)n 523 + 2001 2367 0 2 176,176, 0,190, +,+, 713667 Simple_repeat Simple_repeat 585 chrUn_NT_473223v1 2473 3089 (CGAGG)n 518 + 2473 3089 0 3 172,182,186, 0,205,430, +,+,+, 713668 Simple_repeat Simple_repeat 585 chrUn_NT_473224v1 1221 5807 (CCCTAA)n 608 + 1221 5807 0 13 182,185,187,178,177,178,1206,181,177,179,712,377,375, 0,193,396,620,843,1042,1237,2496,2701,2899,3078,3804,4211, +,+,+,+,+,+,+,+,+,+,+,+,+, 713686 Simple_repeat Simple_repeat 585 chrUn_NT_473225v1 876 2189 GGXHOI 341 - 876 2189 0 2 265,991, 0,322, -,-, 713688 Satellite W-chromosome 585 chrUn_NT_473225v1 2947 4420 GGXHOI 357 - 2947 4420 0 2 383,1028, 0,445, -,-, 713690 Satellite W-chromosome 585 chrUn_NT_473225v1 5085 5797 GGXHOI 341 - 5085 5797 0 2 507,181, 0,531, -,-, 713692 Satellite W-chromosome 585 chrUn_NT_473226v1 1908 2153 (CTCTATGGGG)n 451 - 1908 2153 0 2 119,126, 0,119, -,-, 713696 Satellite Satellite 585 chrUn_NT_473227v1 2056 2510 A-rich 598 + 2056 2510 0 2 358,38, 0,416, +,+, 713706 Low_complexity Low_complexity 585 chrUn_NT_473228v1 2475 5794 GGXHOI 426 - 2475 5794 0 4 239,224,2343,403, 0,252,520,2916, -,-,-,-, 713718 Satellite W-chromosome 585 chrUn_NT_473229v1 5023 5170 (ACCCATAGAG)n 350 - 5023 5170 0 2 15,18, 0,129, -,-, 713726 Satellite Satellite 585 chrUn_NT_473229v1 5178 5555 (CTCTATGGGG)n 297 - 5178 5555 0 3 113,104,112, 0,137,265, -,-,-, 713728 Satellite Satellite 585 chrUn_NT_473230v1 699 1346 GGXHOI 325 - 699 1346 0 3 130,296,137, 0,183,510, -,-,-, 713732 Satellite W-chromosome 585 chrUn_NT_473230v1 2395 2963 GGXHOI 446 - 2395 2963 0 2 132,408, 0,160, -,-, 713735 Satellite W-chromosome 585 chrUn_NT_473230v1 3095 3407 GGXHOI 340 - 3095 3407 0 2 129,135, 0,177, -,-, 713736 Satellite W-chromosome 585 chrUn_NT_473230v1 3480 4241 GGXHOI 319 - 3480 4241 0 2 602,144, 0,617, -,-, 713737 Satellite W-chromosome 585 chrUn_NT_473230v1 5090 5796 GGXHOI 454 - 5090 5796 0 2 603,88, 0,618, -,-, 713739 Satellite W-chromosome 585 chrUn_NT_473233v1 308 638 (ACCCCATAGGG)n 526 - 308 638 0 2 163,167, 0,163, -,-, 713747 Satellite Satellite 585 chrUn_NT_473233v1 670 1545 (ACCCATAGGG)n 565 - 670 1545 0 3 249,83,422, 0,370,453, -,-,-, 713749 Satellite Satellite 585 chrUn_NT_473239v1 1799 5333 GGLTR7-int 400 - 1799 5333 0 4 278,888,1624,103, 0,358,1341,3431, -,-,-,-, 713796 LTR ERV1 585 chrUn_NT_473240v1 3351 4473 (CGAGG)n 508 + 3351 4473 0 2 909,177, 0,945, +,+, 713813 Simple_repeat Simple_repeat 585 chrUn_NT_473241v1 1973 3689 (CCTTG)n 602 + 1973 3689 0 4 500,450,221,348, 0,511,1135,1368, +,+,+,+, 713828 Simple_repeat Simple_repeat 585 chrUn_NT_473241v1 3729 5188 (CCTTG)n 616 + 3729 5188 0 6 240,47,176,114,173,310, 0,417,492,826,962,1149, +,+,+,+,+,+, 713831 Simple_repeat Simple_repeat 585 chrUn_NT_473241v1 5259 5791 (CCTTG)n 563 + 5259 5791 0 2 175,322, 0,210, +,+, 713835 Simple_repeat Simple_repeat 585 chrUn_NT_473242v1 1926 3135 GGXHOI 331 - 1926 3135 0 2 375,779, 0,430, -,-, 713837 Satellite W-chromosome 585 chrUn_NT_473242v1 3208 5791 GGXHOI 376 - 3208 5791 0 4 590,547,882,429, 0,617,1214,2154, -,-,-,-, 713838 Satellite W-chromosome 585 chrUn_NT_473243v1 5341 5768 (ATG)n 706 + 5341 5768 0 2 186,241, 0,186, +,+, 713845 Simple_repeat Simple_repeat 585 chrUn_NT_473245v1 3916 5770 GGXHOI 567 - 3916 5770 0 2 288,1524, 0,330, -,-, 713863 Satellite W-chromosome 585 chrUn_NT_473247v1 4373 5645 GGXHOI 351 + 4373 5645 0 3 371,594,277, 0,386,995, +,+,+, 713867 Satellite W-chromosome 585 chrUn_NT_473248v1 5234 5768 GGXHOI 404 - 5234 5768 0 2 219,295, 0,239, -,-, 713869 Satellite W-chromosome 585 chrUn_NT_473250v1 2234 3682 CR1-B2 304 + 2234 3682 0 2 76,97, 0,1351, +,+, 713884 LINE CR1 585 chrUn_NT_473250v1 5584 5706 G-rich 568 + 5584 5706 0 2 47,38, 0,84, +,+, 713887 Low_complexity Low_complexity 585 chrUn_NT_473252v1 3439 5781 GGLTR10D 911 + 3439 5781 0 2 342,2000, 0,342, +,+, 713891 LTR ERVK 585 chrUn_NT_473260v1 3962 4588 CR1-H 673 + 3962 4588 0 2 478,139, 0,487, +,+, 713914 LINE CR1 585 chrUn_NT_473261v1 634 3204 GGXHOI 423 - 634 3204 0 6 623,97,830,135,368,405, 0,635,744,1589,1773,2165, -,-,-,-,-,-, 713918 Satellite W-chromosome 585 chrUn_NT_473261v1 3300 4241 GGXHOI 316 - 3300 4241 0 4 151,211,285,239, 0,167,403,702, -,-,-,-, 713919 Satellite W-chromosome 585 chrUn_NT_473261v1 4652 5769 GGXHOI 425 - 4652 5769 0 2 769,335, 0,782, -,-, 713921 Satellite W-chromosome 585 chrUn_NT_473262v1 35 3917 GGXHOI 574 - 35 3917 0 3 427,124,1539, 0,1395,2343, -,-,-, 713923 Satellite W-chromosome 585 chrUn_NT_473262v1 4071 5466 GGXHOI 522 - 4071 5466 0 2 155,237, 0,1158, -,-, 713927 Satellite W-chromosome 585 chrUn_NT_473263v1 513 1687 (ACCCCATAGGG)n 582 + 513 1687 0 4 122,45,200,207, 0,363,643,967, +,+,+,+, 713934 Satellite Satellite 585 chrUn_NT_473263v1 1676 2004 (CTCTATGGGG)n 692 + 1676 2004 0 2 64,19, 0,309, +,+, 713939 Satellite Satellite 585 chrUn_NT_473263v1 1986 2326 (ACCCCATAGGG)n 576 - 1986 2326 0 2 191,20, 0,320, -,-, 713941 Satellite Satellite 585 chrUn_NT_473265v1 1806 2055 CR1-X 434 - 1806 2055 0 2 74,172, 0,77, -,-, 713959 LINE CR1 585 chrUn_NT_473266v1 3710 4099 (GAGTG)n 303 + 3710 4099 0 2 186,192, 0,197, +,+, 713967 Simple_repeat Simple_repeat 585 chrUn_NT_473266v1 5311 5401 (GGAGT)n 82 + 5311 5401 0 2 12,36, 0,54, +,+, 713970 Simple_repeat Simple_repeat 585 chrUn_NT_473266v1 5565 5764 A-rich 479 + 5565 5764 0 2 35,102, 0,97, +,+, 713973 Low_complexity Low_complexity 585 chrUn_NT_473267v1 608 1379 (CAGGC)n 468 + 608 1379 0 3 69,18,281, 0,284,490, +,+,+, 713978 Simple_repeat Simple_repeat 585 chrUn_NT_473267v1 1129 1847 (CAAGG)n 631 + 1129 1847 0 3 261,87,197, 0,434,521, +,+,+, 713981 Simple_repeat Simple_repeat 585 chrUn_NT_473267v1 2057 2876 (CAAGG)n 550 + 2057 2876 0 2 267,362, 0,457, +,+, 713984 Simple_repeat Simple_repeat 585 chrUn_NT_473267v1 2893 4024 (CAAGG)n 641 + 2893 4024 0 3 340,32,174, 0,885,957, +,+,+, 713987 Simple_repeat Simple_repeat 585 chrUn_NT_473267v1 4331 4783 (CAAGG)n 636 + 4331 4783 0 2 191,81, 0,371, +,+, 713991 Simple_repeat Simple_repeat 585 chrUn_NT_473267v1 5162 5765 (CAAGG)n 605 + 5162 5765 0 3 188,183,54, 0,188,549, +,+,+, 713995 Simple_repeat Simple_repeat 585 chrUn_NT_473268v1 4583 5622 (CTCTATGGGG)n 559 + 4583 5622 0 5 185,267,71,165,78, 0,216,601,672,961, +,+,+,+,+, 714002 Satellite Satellite 585 chrUn_NT_473268v1 5420 5709 (ACCCCATAGGG)n 504 + 5420 5709 0 2 124,165, 0,124, +,+, 714004 Satellite Satellite 585 chrUn_NT_473269v1 4753 5750 GGXHOI 402 - 4753 5750 0 4 212,327,251,115, 0,260,605,882, -,-,-,-, 714007 Satellite W-chromosome 585 chrUn_NT_473270v1 2890 3890 GGXHOI 387 - 2890 3890 0 2 264,687, 0,313, -,-, 714012 Satellite W-chromosome 585 chrUn_NT_473271v1 3773 4610 (ACCCCATAGGG)n 620 - 3773 4610 0 2 271,566, 0,271, -,-, 714018 Satellite Satellite 585 chrUn_NT_473271v1 4632 5314 (ACCCCATAGGG)n 573 - 4632 5314 0 3 260,28,149, 0,505,533, -,-,-, 714020 Satellite Satellite 585 chrUn_NT_473271v1 4892 5137 (ACCCATAGGG)n 578 - 4892 5137 0 3 98,125,22, 0,98,223, -,-,-, 714021 Satellite Satellite 585 chrUn_NT_473272v1 721 3534 GGXHOI 395 - 721 3534 0 3 851,1033,879, 0,868,1934, -,-,-, 714024 Satellite W-chromosome 585 chrUn_NT_473272v1 3610 5764 GGXHOI 380 - 3610 5764 0 3 1659,312,144, 0,1676,2010, -,-,-, 714025 Satellite W-chromosome 585 chrUn_NT_473274v1 1540 4512 GGXHOI 359 + 1540 4512 0 3 333,920,1650, 0,390,1322, +,+,+, 714032 Satellite W-chromosome 585 chrUn_NT_473275v1 4875 5757 GGXHOI 356 - 4875 5757 0 2 622,218, 0,664, -,-, 714036 Satellite W-chromosome 585 chrUn_NT_473276v1 694 1513 GGXHOI 306 + 694 1513 0 3 221,279,224, 0,266,595, +,+,+, 714039 Satellite W-chromosome 585 chrUn_NT_473276v1 2237 2597 GGXHOI 308 + 2237 2597 0 2 176,135, 0,225, +,+, 714041 Satellite W-chromosome 585 chrUn_NT_473276v1 2852 3949 GGXHOI 358 + 2852 3949 0 4 130,126,571,138, 0,176,346,959, +,+,+,+, 714042 Satellite W-chromosome 585 chrUn_NT_473276v1 4197 5752 GGXHOI 405 + 4197 5752 0 3 136,1191,162, 0,187,1393, +,+,+, 714043 Satellite W-chromosome 585 chrUn_NT_473280v1 1461 1952 GGXHOI 345 + 1461 1952 0 3 170,126,142, 0,211,349, +,+,+, 714067 Satellite W-chromosome 585 chrUn_NT_473280v1 2729 3772 GGXHOI 371 + 2729 3772 0 3 520,194,269, 0,563,774, +,+,+, 714069 Satellite W-chromosome 585 chrUn_NT_473280v1 3878 5735 GGXHOI 363 + 3878 5735 0 2 1508,327, 0,1530, +,+, 714070 Satellite W-chromosome 585 chrUn_NT_473281v1 2027 4509 GGERVL-B-int 781 + 2027 4509 0 3 317,1258,907, 0,317,1575, +,+,+, 714075 LTR ERVL 585 chrUn_NT_473283v1 2209 2317 (TCC)n 814 + 2209 2317 0 2 22,24, 0,84, +,+, 714080 Simple_repeat Simple_repeat 585 chrUn_NT_473283v1 2454 2585 (TCC)n 704 + 2454 2585 0 2 28,41, 0,90, +,+, 714081 Simple_repeat Simple_repeat 585 chrUn_NT_473283v1 4697 4886 (TCC)n 804 + 4697 4886 0 3 22,22,22, 0,84,167, +,+,+, 714083 Simple_repeat Simple_repeat 585 chrUn_NT_473283v1 4967 5098 (TCC)n 740 + 4967 5098 0 2 28,43, 0,88, +,+, 714084 Simple_repeat Simple_repeat 585 chrUn_NT_473285v1 1036 1409 (ACCCCATAGGG)n 361 - 1036 1409 0 2 227,126, 0,247, -,-, 714092 Satellite Satellite 585 chrUn_NT_473289v1 919 1375 CR1-H 652 - 919 1375 0 2 162,294, 0,162, -,-, 714110 LINE CR1 585 chrUn_NT_473292v1 4579 5686 GGXHOI 357 - 4579 5686 0 2 414,672, 0,435, -,-, 714139 Satellite W-chromosome 585 chrUn_NT_473293v1 2911 5611 GGXHOI 369 + 2911 5611 0 11 137,118,150,231,539,412,231,145,216,133,168, 0,153,289,453,698,1291,1727,1971,2159,2388,2532, +,+,+,+,+,+,+,+,+,+,+, 714143 Satellite W-chromosome 585 chrUn_NT_473294v1 4667 5741 Z-REP 486 - 4667 5741 0 2 92,953, 0,121, -,-, 714147 Satellite macro 585 chrUn_NT_473295v1 266 1641 (CAAGG)n 646 + 266 1641 0 6 177,174,209,337,219,221, 0,188,389,598,935,1154, +,+,+,+,+,+, 714150 Simple_repeat Simple_repeat 585 chrUn_NT_473295v1 1736 2607 (CAAGG)n 628 + 1736 2607 0 3 240,33,216, 0,441,655, +,+,+, 714152 Simple_repeat Simple_repeat 585 chrUn_NT_473295v1 2675 3800 (CAAGG)n 638 + 2675 3800 0 3 181,456,444, 0,181,681, +,+,+, 714156 Simple_repeat Simple_repeat 585 chrUn_NT_473295v1 4084 5003 (CAAGG)n 627 + 4084 5003 0 4 140,44,203,152, 0,323,382,767, +,+,+,+, 714160 Simple_repeat Simple_repeat 585 chrUn_NT_473295v1 5267 5740 (CAAGG)n 629 + 5267 5740 0 2 174,283, 0,190, +,+, 714166 Simple_repeat Simple_repeat 585 chrUn_NT_473296v1 3604 5741 GGXHOI 378 + 3604 5741 0 4 871,570,266,345, 0,888,1488,1792, +,+,+,+, 714168 Satellite W-chromosome 585 chrUn_NT_473297v1 4637 5739 GGXHOI 383 - 4637 5739 0 2 424,660, 0,442, -,-, 714170 Satellite W-chromosome 585 chrUn_NT_473298v1 843 1545 GGXHOI 416 + 843 1545 0 2 463,221, 0,481, +,+, 714172 Satellite W-chromosome 585 chrUn_NT_473298v1 1823 5739 GGXHOI 414 + 1823 5739 0 4 626,1923,471,776, 0,669,2654,3140, +,+,+,+, 714173 Satellite W-chromosome 585 chrUn_NT_473299v1 2487 5672 GGXHOI 350 - 2487 5672 0 4 136,2154,719,135, 0,147,2317,3050, -,-,-,-, 714175 Satellite W-chromosome 585 chrUn_NT_473300v1 668 1283 (ACCCATTGGG)n 395 - 668 1283 0 3 251,141,173, 0,301,442, -,-,-, 714177 Satellite Satellite 585 chrUn_NT_473300v1 1805 2228 (ACCCATAGGG)n 440 - 1805 2228 0 3 124,145,125, 0,124,298, -,-,-, 714179 Satellite Satellite 585 chrUn_NT_473308v1 3300 4691 GGXHOI 382 + 3300 4691 0 3 86,612,646, 0,116,745, +,+,+, 714252 Satellite W-chromosome 585 chrUn_NT_473309v1 2879 2975 (CCTTG)n 302 + 2879 2975 0 2 33,24, 0,72, +,+, 714260 Simple_repeat Simple_repeat 585 chrUn_NT_473311v1 4748 5722 GGXHOI 556 + 4748 5722 0 3 150,199,76, 0,197,898, +,+,+, 714271 Satellite W-chromosome 585 chrUn_NT_473312v1 1763 3149 GGLTR7-int 294 - 1763 3149 0 3 281,288,101, 0,971,1285, -,-,-, 714276 LTR ERV1 585 chrUn_NT_473313v1 1213 1730 GGXHOI 424 + 1213 1730 0 2 227,278, 0,239, +,+, 714280 Satellite W-chromosome 585 chrUn_NT_473313v1 4145 5434 GGXHOI 411 + 4145 5434 0 2 913,365, 0,924, +,+, 714283 Satellite W-chromosome 585 chrUn_NT_473314v1 3702 5721 GGXHOI 567 - 3702 5721 0 4 423,27,830,31, 0,463,746,1988, -,-,-,-, 714289 Satellite W-chromosome 585 chrUn_NT_473315v1 3576 4162 CR1-Y2 556 - 3576 4162 0 2 87,395, 0,191, -,-, 714296 LINE CR1 585 chrUn_NT_473316v1 3286 5712 Z-REP 741 - 3286 5712 0 2 1833,520, 0,1906, -,-, 714299 Satellite macro 585 chrUn_NT_473320v1 206 3785 GGXHOI 556 - 206 3785 0 8 223,520,24,17,744,14,578,266, 0,416,1234,1481,1512,2492,2520,3313, -,-,-,-,-,-,-,-, 714313 Satellite W-chromosome 585 chrUn_NT_473320v1 3859 5726 GGXHOI 561 - 3859 5726 0 2 220,1633, 0,234, -,-, 714319 Satellite W-chromosome 585 chrUn_NT_473322v1 774 5648 GGXHOI 380 + 774 5648 0 6 351,1132,1135,1102,407,537, 0,377,1535,2726,3884,4337, +,+,+,+,+,+, 714326 Satellite W-chromosome 585 chrUn_NT_473323v1 457 1394 (CCTTG)n 610 + 457 1394 0 2 428,482, 0,455, +,+, 714330 Simple_repeat Simple_repeat 585 chrUn_NT_473323v1 1469 2148 (CCTTG)n 624 + 1469 2148 0 2 109,75, 0,604, +,+, 714332 Simple_repeat Simple_repeat 585 chrUn_NT_473323v1 3994 4742 (CCTTG)n 612 + 3994 4742 0 3 112,75,353, 0,297,395, +,+,+, 714345 Simple_repeat Simple_repeat 585 chrUn_NT_473323v1 4753 5707 (CCTTG)n 551 + 4753 5707 0 3 236,74,349, 0,482,605, +,+,+, 714348 Simple_repeat Simple_repeat 585 chrUn_NT_473325v1 28 4296 Sat-CR1_GG 152 - 28 4296 0 2 1294,80, 0,4188, -,-, 714368 Satellite Satellite 585 chrUn_NT_473325v1 1322 4216 GGXHOI 566 - 1322 4216 0 2 896,1680, 0,1214, -,-, 714369 Satellite W-chromosome 585 chrUn_NT_473325v1 4247 5640 GGXHOI 592 - 4247 5640 0 3 161,279,291, 0,204,1102, -,-,-, 714370 Satellite W-chromosome 585 chrUn_NT_473327v1 1821 4875 GGXHOI 369 - 1821 4875 0 3 510,2048,377, 0,566,2677, -,-,-, 714402 Satellite W-chromosome 585 chrUn_NT_473328v1 217 564 (ACCCCATAGGG)n 437 + 217 564 0 2 142,173, 0,174, +,+, 714405 Satellite Satellite 585 chrUn_NT_473328v1 2444 3278 (ACCCCATAGGG)n 513 + 2444 3278 0 5 158,172,116,86,151, 0,196,404,556,683, +,+,+,+,+, 714407 Satellite Satellite 585 chrUn_NT_473329v1 821 1454 GGXHOI 361 - 821 1454 0 2 150,426, 0,207, -,-, 714412 Satellite W-chromosome 585 chrUn_NT_473329v1 1546 1955 GGXHOI 362 - 1546 1955 0 2 133,222, 0,187, -,-, 714413 Satellite W-chromosome 585 chrUn_NT_473329v1 2541 4598 GGXHOI 389 - 2541 4598 0 2 1037,1009, 0,1048, -,-, 714415 Satellite W-chromosome 585 chrUn_NT_473329v1 4665 5572 GGXHOI 358 - 4665 5572 0 2 513,379, 0,528, -,-, 714416 Satellite W-chromosome 585 chrUn_NT_473330v1 1556 5713 GGXHOI 383 - 1556 5713 0 4 1623,261,485,1694, 0,1638,1923,2463, -,-,-,-, 714418 Satellite W-chromosome 585 chrUn_NT_473331v1 2204 3088 GGXHOI 552 - 2204 3088 0 2 593,113, 0,771, -,-, 714421 Satellite W-chromosome 585 chrUn_NT_473331v1 3168 5713 GGXHOI 556 - 3168 5713 0 3 506,1608,349, 0,548,2196, -,-,-, 714423 Satellite W-chromosome 585 chrUn_NT_473335v1 727 1029 (ACCCATAGGG)n 352 + 727 1029 0 2 114,131, 0,171, +,+, 714457 Satellite Satellite 585 chrUn_NT_473336v1 5094 5577 (ACCCCATAGGG)n 560 - 5094 5577 0 3 162,20,21, 0,311,462, -,-,-, 714465 Satellite Satellite 585 chrUn_NT_473337v1 3645 5692 GGXHOI 586 - 3645 5692 0 4 407,125,404,64, 0,965,1132,1983, -,-,-,-, 714473 Satellite W-chromosome 585 chrUn_NT_473342v1 2960 5672 GGXHOI 407 - 2960 5672 0 6 884,144,995,187,127,145, 0,940,1126,2155,2392,2567, -,-,-,-,-,-, 714495 Satellite W-chromosome 585 chrUn_NT_473343v1 1004 3574 GGXHOI 362 + 1004 3574 0 6 452,211,533,189,627,418, 0,473,701,1262,1462,2152, +,+,+,+,+,+, 714498 Satellite W-chromosome 585 chrUn_NT_473343v1 4224 5703 GGXHOI 306 + 4224 5703 0 4 590,154,152,522, 0,602,788,957, +,+,+,+, 714499 Satellite W-chromosome 585 chrUn_NT_473344v1 408 841 (ACCCCATAGGG)n 506 + 408 841 0 3 112,90,107, 0,175,326, +,+,+, 714501 Satellite Satellite 585 chrUn_NT_473344v1 1325 2045 (ACCCCATAGGG)n 470 + 1325 2045 0 5 102,105,96,113,87, 0,164,325,471,633, +,+,+,+,+, 714502 Satellite Satellite 585 chrUn_NT_473344v1 2389 2798 (ACCCCATAGGG)n 453 + 2389 2798 0 3 107,99,90, 0,157,319, +,+,+, 714503 Satellite Satellite 585 chrUn_NT_473344v1 3006 3411 (ACCCCATAGGG)n 477 + 3006 3411 0 3 82,111,112, 0,132,293, +,+,+, 714504 Satellite Satellite 585 chrUn_NT_473344v1 3617 4832 (ACCCCATAGGG)n 477 + 3617 4832 0 8 123,101,122,101,122,92,101,100, 0,173,324,497,649,822,964,1115, +,+,+,+,+,+,+,+, 714505 Satellite Satellite 585 chrUn_NT_473344v1 5161 5368 (ACCCCATAGGG)n 595 + 5161 5368 0 2 49,101, 0,106, +,+, 714507 Satellite Satellite 585 chrUn_NT_473345v1 275 1170 (CGAGG)n 531 + 275 1170 0 3 281,255,175, 0,449,720, +,+,+, 714511 Simple_repeat Simple_repeat 585 chrUn_NT_473345v1 1339 2245 (CGAGG)n 506 + 1339 2245 0 2 462,410, 0,496, +,+, 714514 Simple_repeat Simple_repeat 585 chrUn_NT_473345v1 2300 2646 (CGAGG)n 522 + 2300 2646 0 2 123,45, 0,301, +,+, 714516 Simple_repeat Simple_repeat 585 chrUn_NT_473345v1 4804 5537 (CGAGG)n 491 + 4804 5537 0 2 407,276, 0,457, +,+, 714530 Simple_repeat Simple_repeat 585 chrUn_NT_473347v1 1361 1719 Sat-CR1_GG 154 - 1361 1719 0 2 123,27, 0,331, -,-, 714534 Satellite Satellite 585 chrUn_NT_473347v1 4075 4361 Sat-CR1_GG 210 - 4075 4361 0 2 24,52, 0,234, -,-, 714542 Satellite Satellite 585 chrUn_NT_473348v1 5194 5700 CR1-H 683 - 5194 5700 0 2 117,389, 0,117, -,-, 714552 LINE CR1 585 chrUn_NT_473353v1 4348 5623 GGXHOI 337 - 4348 5623 0 3 800,150,251, 0,827,1024, -,-,-, 714571 Satellite W-chromosome 585 chrUn_NT_473354v1 909 4431 GGERV28_I-int 144 - 909 4431 0 4 560,1253,373,643, 0,654,2221,2879, -,-,-,-, 714573 LTR ERVK 585 chrUn_NT_473357v1 3096 3623 GGERVL-C-int 190 + 3096 3623 0 2 142,364, 0,163, +,+, 714587 LTR ERVL 585 chrUn_NT_473364v1 4311 5683 GGXHOI 388 - 4311 5683 0 2 1073,250, 0,1122, -,-, 714611 Satellite W-chromosome 585 chrUn_NT_473365v1 2243 2978 GGXHOI 313 + 2243 2978 0 2 182,503, 0,232, +,+, 714613 Satellite W-chromosome 585 chrUn_NT_473365v1 3607 4079 GGXHOI 369 + 3607 4079 0 2 133,297, 0,175, +,+, 714615 Satellite W-chromosome 585 chrUn_NT_473365v1 4375 5379 GGXHOI 367 + 4375 5379 0 3 453,279,181, 0,498,823, +,+,+, 714616 Satellite W-chromosome 585 chrUn_NT_473367v1 1912 5668 GGXHOI 417 - 1912 5668 0 3 1449,1464,795, 0,1468,2961, -,-,-, 714644 Satellite W-chromosome 585 chrUn_NT_473368v1 650 5679 Z-REP 763 + 650 5679 0 3 154,1453,2547, 0,905,2482, +,+,+, 714646 Satellite macro 585 chrUn_NT_473369v1 3182 5027 GGXHOI 317 + 3182 5027 0 4 124,1272,135,264, 0,137,1425,1581, +,+,+,+, 714649 Satellite W-chromosome 585 chrUn_NT_473373v1 945 1947 GGXHOI 492 - 945 1947 0 2 332,622, 0,380, -,-, 714670 Satellite W-chromosome 585 chrUn_NT_473373v1 2233 3037 GGXHOI 535 - 2233 3037 0 2 334,459, 0,345, -,-, 714672 Satellite W-chromosome 585 chrUn_NT_473373v1 4287 5278 GGXHOI 506 - 4287 5278 0 4 19,168,159,436, 0,205,385,555, -,-,-,-, 714677 Satellite W-chromosome 585 chrUn_NT_473375v1 1712 2820 GGXHOI 518 - 1712 2820 0 2 634,463, 0,645, -,-, 714685 Satellite W-chromosome 585 chrUn_NT_473375v1 3749 5675 GGXHOI 499 - 3749 5675 0 3 1139,106,435, 0,1324,1491, -,-,-, 714687 Satellite W-chromosome 585 chrUn_NT_473376v1 3559 5316 GGERVL-A-int 750 - 3559 5316 0 2 1299,458, 0,1299, -,-, 714691 LTR ERVL 585 chrUn_NT_473378v1 1781 2887 CR1-B2 645 - 1781 2887 0 2 878,225, 0,881, -,-, 714697 LINE CR1 585 chrUn_NT_473379v1 781 2389 (CGAGG)n 490 + 781 2389 0 5 90,172,441,324,337, 0,111,298,773,1271, +,+,+,+,+, 714702 Simple_repeat Simple_repeat 585 chrUn_NT_473379v1 3531 3902 (CCTCG)n 590 + 3531 3902 0 2 137,53, 0,318, +,+, 714707 Simple_repeat Simple_repeat 585 chrUn_NT_473379v1 4362 5533 (CCTCG)n 490 + 4362 5533 0 4 405,192,169,309, 0,425,634,862, +,+,+,+, 714713 Simple_repeat Simple_repeat 585 chrUn_NT_473381v1 769 2221 GGXHOI 405 + 769 2221 0 2 391,1048, 0,404, +,+, 714720 Satellite W-chromosome 585 chrUn_NT_473381v1 2401 5544 GGXHOI 447 + 2401 5544 0 3 811,853,1446, 0,827,1697, +,+,+, 714721 Satellite W-chromosome 585 chrUn_NT_473382v1 937 1269 (ACCCATAGAG)n 582 - 937 1269 0 2 146,30, 0,302, -,-, 714727 Satellite Satellite 585 chrUn_NT_473382v1 1252 1822 (CTCTATGGGG)n 694 - 1252 1822 0 2 225,187, 0,383, -,-, 714729 Satellite Satellite 585 chrUn_NT_473382v1 1742 2036 (ACCCCATAGGG)n 460 - 1742 2036 0 2 130,42, 0,252, -,-, 714732 Satellite Satellite 585 chrUn_NT_473383v1 1064 3929 GGXHOI 570 + 1064 3929 0 2 471,2016, 0,849, +,+, 714745 Satellite W-chromosome 585 chrUn_NT_473385v1 899 1594 (CTCTATGGGG)n 585 + 899 1594 0 5 68,12,35,148,67, 0,179,312,369,628, +,+,+,+,+, 714751 Satellite Satellite 585 chrUn_NT_473385v1 1793 2050 (ACCCATAGAG)n 540 - 1793 2050 0 2 90,49, 0,208, -,-, 714757 Satellite Satellite 585 chrUn_NT_473385v1 2306 3378 (ACCCATAGAG)n 714 - 2306 3378 0 5 277,70,22,40,144, 0,531,722,866,928, -,-,-,-,-, 714761 Satellite Satellite 585 chrUn_NT_473385v1 2907 3172 (ACCCCATAGGG)n 579 - 2907 3172 0 2 121,122, 0,143, -,-, 714763 Satellite Satellite 585 chrUn_NT_473385v1 4229 4626 (ACCCATAGAG)n 766 - 4229 4626 0 2 143,136, 0,261, -,-, 714767 Satellite Satellite 585 chrUn_NT_473385v1 4964 5218 (ACCCCATAGGG)n 694 + 4964 5218 0 2 74,13, 0,241, +,+, 714771 Satellite Satellite 585 chrUn_NT_473389v1 458 1436 GGXHOI 379 - 458 1436 0 2 631,333, 0,645, -,-, 714790 Satellite W-chromosome 585 chrUn_NT_473389v1 1521 5579 GGXHOI 390 - 1521 5579 0 5 1007,324,691,148,1822, 0,1025,1360,2071,2236, -,-,-,-,-, 714791 Satellite W-chromosome 585 chrUn_NT_473390v1 2713 2812 (GATGG)n 316 + 2713 2812 0 2 32,30, 0,69, +,+, 714795 Simple_repeat Simple_repeat 585 chrUn_NT_473393v1 1220 4453 GGXHOI 526 - 1220 4453 0 3 1618,319,726, 0,1991,2507, -,-,-, 714820 Satellite W-chromosome 585 chrUn_NT_473393v1 4496 5524 GGXHOI 532 - 4496 5524 0 2 503,12, 0,1016, -,-, 714824 Satellite W-chromosome 585 chrUn_NT_473394v1 421 2854 GGXHOI 408 + 421 2854 0 5 263,135,88,251,1564, 0,274,420,565,869, +,+,+,+,+, 714827 Satellite W-chromosome 585 chrUn_NT_473394v1 4946 5647 GGXHOI 363 + 4946 5647 0 2 537,150, 0,551, +,+, 714832 Satellite W-chromosome 585 chrUn_NT_473396v1 1496 1973 CR1-H 550 + 1496 1973 0 2 332,131, 0,346, +,+, 714841 LINE CR1 585 chrUn_NT_473397v1 5582 5626 (GTTAG)n 628 + 5582 5626 0 2 7,6, 0,38, +,+, 714846 Simple_repeat Simple_repeat 585 chrUn_NT_473398v1 369 4147 GGXHOI 401 - 369 4147 0 4 2552,518,321,240, 0,2592,3166,3538, -,-,-,-, 714849 Satellite W-chromosome 585 chrUn_NT_473398v1 4230 4897 GGXHOI 390 - 4230 4897 0 2 476,139, 0,528, -,-, 714850 Satellite W-chromosome 585 chrUn_NT_473398v1 4963 5641 GGXHOI 356 - 4963 5641 0 2 257,405, 0,273, -,-, 714851 Satellite W-chromosome 585 chrUn_NT_473400v1 1037 2504 GGXHOI 386 - 1037 2504 0 5 365,107,490,153,280, 0,383,502,1011,1187, -,-,-,-,-, 714856 Satellite W-chromosome 585 chrUn_NT_473400v1 3139 5641 GGXHOI 451 - 3139 5641 0 6 378,404,227,282,855,220, 0,394,846,1116,1409,2282, -,-,-,-,-,-, 714859 Satellite W-chromosome 585 chrUn_NT_473401v1 4391 4490 (C)n 893 + 4391 4490 0 2 30,19, 0,80, +,+, 714864 Simple_repeat Simple_repeat 585 chrUn_NT_473401v1 4602 4737 (C)n 541 + 4602 4737 0 2 35,44, 0,91, +,+, 714865 Simple_repeat Simple_repeat 585 chrUn_NT_473403v1 3894 4322 GGXHOI 356 + 3894 4322 0 2 201,175, 0,253, +,+, 714871 Satellite W-chromosome 585 chrUn_NT_473406v1 4497 5188 (GCCCCACAGCT)n 424 + 4497 5188 0 4 123,250,65,41, 0,155,460,650, +,+,+,+, 714898 Satellite Satellite 585 chrUn_NT_473406v1 5355 5637 (GCCCCACAGCT)n 379 + 5355 5637 0 2 119,130, 0,152, +,+, 714901 Satellite Satellite 585 chrUn_NT_473407v1 2777 4128 CR1-H 683 + 2777 4128 0 2 1239,112, 0,1239, +,+, 714905 LINE CR1 585 chrUn_NT_473408v1 1521 1830 (ACCCCATAGGG)n 338 - 1521 1830 0 2 132,122, 0,187, -,-, 714909 Satellite Satellite 585 chrUn_NT_473408v1 2072 2360 (ACCCCATAGGG)n 371 - 2072 2360 0 2 121,112, 0,176, -,-, 714911 Satellite Satellite 585 chrUn_NT_473408v1 3310 3620 (ACCCCATAGGG)n 386 - 3310 3620 0 2 132,123, 0,187, -,-, 714917 Satellite Satellite 585 chrUn_NT_473408v1 3703 3991 (ACCCCATAGGG)n 365 - 3703 3991 0 2 121,125, 0,163, -,-, 714918 Satellite Satellite 585 chrUn_NT_473408v1 4559 4858 (ACCCCATAGGG)n 351 - 4559 4858 0 2 132,125, 0,174, -,-, 714922 Satellite Satellite 585 chrUn_NT_473411v1 512 1000 (CAAGG)n 558 + 512 1000 0 2 374,99, 0,389, +,+, 714939 Simple_repeat Simple_repeat 585 chrUn_NT_473411v1 1215 1690 (CCTTG)n 518 + 1215 1690 0 2 251,54, 0,421, +,+, 714940 Simple_repeat Simple_repeat 585 chrUn_NT_473411v1 2902 4695 GGXHOI 369 + 2902 4695 0 2 465,1267, 0,526, +,+, 714943 Satellite W-chromosome 585 chrUn_NT_473411v1 4794 5637 GGXHOI 347 + 4794 5637 0 2 466,315, 0,528, +,+, 714944 Satellite W-chromosome 585 chrUn_NT_473412v1 400 1299 Sat-CR1_GG 208 + 400 1299 0 2 162,476, 0,423, +,+, 714947 Satellite Satellite 585 chrUn_NT_473412v1 3258 3786 Sat-CR1_GG 166 + 3258 3786 0 2 162,123, 0,405, +,+, 714957 Satellite Satellite 585 chrUn_NT_473415v1 346 5596 GGXHOI 401 - 346 5596 0 11 181,165,474,1183,339,163,201,137,640,637,768, 0,228,440,943,2163,2548,2774,2999,3150,3818,4482, -,-,-,-,-,-,-,-,-,-,-, 714986 Satellite W-chromosome 585 chrUn_NT_473416v1 4239 5115 GA-rich 336 + 4239 5115 0 2 352,345, 0,531, +,+, 714998 Low_complexity Low_complexity 585 chrUn_NT_473418v1 47 266 CR1-H 658 + 47 266 0 2 96,115, 0,104, +,+, 715004 LINE CR1 585 chrUn_NT_473418v1 264 1103 Z-REP 528 + 264 1103 0 2 440,315, 0,524, +,+, 715005 Satellite macro 585 chrUn_NT_473418v1 5257 5365 GGLTR7-int 649 - 5257 5365 0 2 33,74, 0,34, -,-, 715009 LTR ERV1 585 chrUn_NT_473419v1 700 5622 GGXHOI 460 - 700 5622 0 6 101,839,640,1015,1003,1188, 0,122,976,1674,2710,3734, -,-,-,-,-,-, 715011 Satellite W-chromosome 585 chrUn_NT_473420v1 2382 5627 GGXHOI 395 - 2382 5627 0 5 1181,132,976,365,425, 0,1200,1376,2411,2820, -,-,-,-,-, 715013 Satellite W-chromosome 585 chrUn_NT_473422v1 1355 3017 GGXHOI 358 - 1355 3017 0 5 130,144,214,639,379, 0,189,351,602,1283, -,-,-,-,-, 715019 Satellite W-chromosome 585 chrUn_NT_473422v1 3082 5614 GGXHOI 380 - 3082 5614 0 4 842,702,611,280, 0,857,1607,2252, -,-,-,-, 715020 Satellite W-chromosome 585 chrUn_NT_473425v1 871 1547 GGXHOI 369 + 871 1547 0 2 402,256, 0,420, +,+, 715031 Satellite W-chromosome 585 chrUn_NT_473425v1 3680 5606 GGXHOI 419 + 3680 5606 0 3 571,575,727, 0,612,1199, +,+,+, 715034 Satellite W-chromosome 585 chrUn_NT_473433v1 2989 5593 GGXHOI 374 + 2989 5593 0 5 436,921,747,77,314, 0,456,1394,2182,2290, +,+,+,+,+, 715089 Satellite W-chromosome 585 chrUn_NT_473435v1 1920 4809 GGXHOI 403 - 1920 4809 0 4 777,801,251,938, 0,827,1668,1951, -,-,-,-, 715094 Satellite W-chromosome 585 chrUn_NT_473436v1 732 1305 GGXHOI 411 - 732 1305 0 3 285,100,161, 0,297,412, -,-,-, 715098 Satellite W-chromosome 585 chrUn_NT_473436v1 1423 2163 GGXHOI 363 - 1423 2163 0 3 285,125,261, 0,316,479, -,-,-, 715099 Satellite W-chromosome 585 chrUn_NT_473436v1 2227 3707 GGXHOI 374 - 2227 3707 0 6 204,141,547,60,130,277, 0,220,374,957,1061,1203, -,-,-,-,-,-, 715100 Satellite W-chromosome 585 chrUn_NT_473436v1 3795 4483 GGXHOI 386 - 3795 4483 0 4 134,158,175,107, 0,171,345,581, -,-,-,-, 715101 Satellite W-chromosome 585 chrUn_NT_473436v1 4606 5487 GGXHOI 363 - 4606 5487 0 2 510,357, 0,524, -,-, 715102 Satellite W-chromosome 585 chrUn_NT_473440v1 316 984 (CCCCATTGGG)n 550 + 316 984 0 3 100,227,108, 0,213,560, +,+,+, 715129 Satellite Satellite 585 chrUn_NT_473442v1 3020 5564 GGXHOI 403 - 3020 5564 0 2 1456,1058, 0,1486, -,-, 715145 Satellite W-chromosome 585 chrUn_NT_473443v1 543 927 (CAAGG)n 608 + 543 927 0 2 180,204, 0,180, +,+, 715150 Simple_repeat Simple_repeat 585 chrUn_NT_473443v1 1059 1646 (CAAGG)n 602 + 1059 1646 0 2 94,315, 0,272, +,+, 715152 Simple_repeat Simple_repeat 585 chrUn_NT_473443v1 1716 2500 CR1-F0 852 + 1716 2500 0 2 698,86, 0,698, +,+, 715155 LINE CR1 585 chrUn_NT_473443v1 2723 3145 (TCCCT)n 234 + 2723 3145 0 2 38,29, 0,393, +,+, 715156 Simple_repeat Simple_repeat 585 chrUn_NT_473445v1 17 502 (GCCTG)n 542 + 17 502 0 2 280,30, 0,455, +,+, 715167 Simple_repeat Simple_repeat 585 chrUn_NT_473445v1 1093 1500 GGLTR7A 600 - 1093 1500 0 2 334,72, 0,335, -,-, 715173 LTR ERV1 585 chrUn_NT_473445v1 1596 2016 (CCCTAA)n 569 + 1596 2016 0 2 176,191, 0,229, +,+, 715175 Simple_repeat Simple_repeat 585 chrUn_NT_473445v1 2374 3183 (CCCTAA)n 520 + 2374 3183 0 4 193,178,180,181, 0,206,401,628, +,+,+,+, 715178 Simple_repeat Simple_repeat 585 chrUn_NT_473445v1 4187 4590 (CCCTAA)n 453 + 4187 4590 0 2 189,198, 0,205, +,+, 715182 Simple_repeat Simple_repeat 585 chrUn_NT_473445v1 4653 5540 (CCCTAA)n 647 + 4653 5540 0 2 687,200, 0,687, +,+, 715184 Simple_repeat Simple_repeat 585 chrUn_NT_473447v1 2306 5521 GGXHOI 359 - 2306 5521 0 9 132,296,618,223,479,345,387,258,286, 0,174,510,1146,1385,1879,2249,2656,2929, -,-,-,-,-,-,-,-,-, 715189 Satellite W-chromosome 585 chrUn_NT_473450v1 2966 3306 (ACCCATAGAG)n 505 - 2966 3306 0 3 100,120,120, 0,100,220, -,-,-, 715197 Satellite Satellite 585 chrUn_NT_473450v1 4225 4675 (ACCCCATAGGG)n 652 - 4225 4675 0 2 190,50, 0,400, -,-, 715200 Satellite Satellite 585 chrUn_NT_473450v1 4810 5204 (CTCTATGGGG)n 365 - 4810 5204 0 2 139,232, 0,162, -,-, 715202 Satellite Satellite 585 chrUn_NT_473451v1 2269 2851 (GCCCCACAGCT)n 492 - 2269 2851 0 3 269,134,112, 0,316,470, -,-,-, 715207 Satellite Satellite 585 chrUn_NT_473451v1 4035 4219 (GCCCCACAGCT)n 436 - 4035 4219 0 2 55,71, 0,113, -,-, 715214 Satellite Satellite 585 chrUn_NT_473451v1 4211 4812 (CTCTATGGGG)n 365 + 4211 4812 0 2 19,214, 0,387, +,+, 715216 Satellite Satellite 585 chrUn_NT_473453v1 242 1175 (CAAGG)n 594 + 242 1175 0 4 176,233,74,49, 0,211,626,884, +,+,+,+, 715230 Simple_repeat Simple_repeat 585 chrUn_NT_473453v1 1290 2068 (CAAGG)n 689 + 1290 2068 0 4 180,179,174,181, 0,199,406,597, +,+,+,+, 715234 Simple_repeat Simple_repeat 585 chrUn_NT_473453v1 2126 3005 (CAAGG)n 632 + 2126 3005 0 5 177,178,102,45,177, 0,190,368,645,702, +,+,+,+,+, 715236 Simple_repeat Simple_repeat 585 chrUn_NT_473453v1 3057 4632 (CAAGG)n 557 + 3057 4632 0 6 206,184,219,289,34,226, 0,231,443,846,1315,1349, +,+,+,+,+,+, 715240 Simple_repeat Simple_repeat 585 chrUn_NT_473453v1 5113 5588 (CAAGG)n 546 + 5113 5588 0 2 140,25, 0,450, +,+, 715247 Simple_repeat Simple_repeat 585 chrUn_NT_473454v1 155 636 GGXHOI 329 - 155 636 0 2 246,172, 0,309, -,-, 715250 Satellite W-chromosome 585 chrUn_NT_473454v1 1314 3802 GGXHOI 346 - 1314 3802 0 5 103,196,129,782,1171, 0,119,357,497,1317, -,-,-,-,-, 715252 Satellite W-chromosome 585 chrUn_NT_473454v1 4475 5595 GGXHOI 353 - 4475 5595 0 3 380,191,489, 0,419,631, -,-,-, 715254 Satellite W-chromosome 585 chrUn_NT_473455v1 988 5603 GGXHOI 544 - 988 5603 0 4 1255,171,331,250, 0,2005,3507,4365, -,-,-,-, 715258 Satellite W-chromosome 585 chrUn_NT_473456v1 2780 3555 GGXHOI 318 - 2780 3555 0 3 272,284,162, 0,314,613, -,-,-, 715263 Satellite W-chromosome 585 chrUn_NT_473456v1 3649 5600 GGXHOI 459 - 3649 5600 0 4 1116,141,153,492, 0,1132,1288,1459, -,-,-,-, 715264 Satellite W-chromosome 585 chrUn_NT_473459v1 2328 5592 Z-REP 727 + 2328 5592 0 3 129,814,1612, 0,827,1652, +,+,+, 715277 Satellite macro 585 chrUn_NT_473461v1 1088 5214 GGXHOI 409 + 1088 5214 0 3 1012,2967,108, 0,1034,4018, +,+,+, 715297 Satellite W-chromosome 585 chrUn_NT_473463v1 2703 3215 (ACCCCATAGGG)n 310 - 2703 3215 0 2 309,158, 0,354, -,-, 715309 Satellite Satellite 585 chrUn_NT_473463v1 3957 4227 (ACCCCATAGGG)n 303 - 3957 4227 0 2 110,142, 0,128, -,-, 715311 Satellite Satellite 585 chrUn_NT_473465v1 3946 5169 GGXHOI 418 - 3946 5169 0 3 464,149,575, 0,483,648, -,-,-, 715319 Satellite W-chromosome 585 chrUn_NT_473468v1 744 2706 GGXHOI 354 - 744 2706 0 2 139,1808, 0,154, -,-, 715347 Satellite W-chromosome 585 chrUn_NT_473468v1 2823 5555 GGXHOI 329 - 2823 5555 0 4 908,235,124,1329, 0,956,1235,1403, -,-,-,-, 715348 Satellite W-chromosome 585 chrUn_NT_473474v1 3026 3374 (TTGGGG)n 534 + 3026 3374 0 2 178,156, 0,192, +,+, 715391 Simple_repeat Simple_repeat 585 chrUn_NT_473476v1 2781 4237 GGXHOI 413 - 2781 4237 0 2 634,805, 0,651, -,-, 715399 Satellite W-chromosome 585 chrUn_NT_473476v1 4723 5591 GGXHOI 292 - 4723 5591 0 2 497,341, 0,527, -,-, 715401 Satellite W-chromosome 585 chrUn_NT_473480v1 1766 4001 GGXHOI 315 + 1766 4001 0 6 303,515,222,254,118,685, 0,315,855,1122,1409,1550, +,+,+,+,+,+, 715420 Satellite W-chromosome 585 chrUn_NT_473480v1 4127 5578 GGXHOI 419 + 4127 5578 0 3 268,231,918, 0,286,533, +,+,+, 715421 Satellite W-chromosome 585 chrUn_NT_473481v1 4364 4988 CR1-H 676 + 4364 4988 0 2 479,139, 0,485, +,+, 715427 LINE CR1 585 chrUn_NT_473483v1 1819 4881 GGXHOI 434 - 1819 4881 0 4 616,881,697,803, 0,654,1546,2259, -,-,-,-, 715430 Satellite W-chromosome 585 chrUn_NT_473484v1 1466 2759 GGXHOI 381 + 1466 2759 0 3 355,148,752, 0,376,541, +,+,+, 715435 Satellite W-chromosome 585 chrUn_NT_473484v1 2864 4754 GGXHOI 428 + 2864 4754 0 2 1679,199, 0,1691, +,+, 715436 Satellite W-chromosome 585 chrUn_NT_473485v1 3244 3314 (C)n 868 + 3244 3314 0 2 17,25, 0,45, +,+, 715442 Simple_repeat Simple_repeat 585 chrUn_NT_473488v1 523 857 GGXHOI 319 - 523 857 0 2 113,206, 0,128, -,-, 715455 Satellite W-chromosome 585 chrUn_NT_473488v1 1012 1949 GGXHOI 366 - 1012 1949 0 4 135,414,138,206, 0,152,577,731, -,-,-,-, 715456 Satellite W-chromosome 585 chrUn_NT_473488v1 2036 4130 GGXHOI 383 - 2036 4130 0 5 298,597,367,481,251, 0,309,949,1344,1843, -,-,-,-,-, 715457 Satellite W-chromosome 585 chrUn_NT_473488v1 4246 5560 GGXHOI 432 - 4246 5560 0 5 458,180,137,268,133, 0,503,700,875,1181, -,-,-,-,-, 715458 Satellite W-chromosome 585 chrUn_NT_473489v1 598 2197 GGXHOI 532 - 598 2197 0 4 18,221,304,161, 0,297,826,1438, -,-,-,-, 715460 Satellite W-chromosome 585 chrUn_NT_473489v1 2209 3494 GGXHOI 501 - 2209 3494 0 4 372,344,17,273, 0,410,766,1012, -,-,-,-, 715465 Satellite W-chromosome 585 chrUn_NT_473489v1 4040 5567 GGXHOI 534 - 4040 5567 0 3 543,141,42, 0,837,1485, -,-,-, 715468 Satellite W-chromosome 585 chrUn_NT_473492v1 3039 3724 (ACCCATAGAG)n 670 + 3039 3724 0 3 141,145,279, 0,141,406, +,+,+, 715484 Satellite Satellite 585 chrUn_NT_473492v1 3900 4480 (CTCTATGGGG)n 598 + 3900 4480 0 2 414,41, 0,539, +,+, 715488 Satellite Satellite 585 chrUn_NT_473492v1 4542 4939 (ACCCATAGAG)n 734 - 4542 4939 0 2 131,144, 0,253, -,-, 715491 Satellite Satellite 585 chrUn_NT_473493v1 1077 1492 (CCCTAA)n 692 + 1077 1492 0 2 185,213, 0,202, +,+, 715498 Simple_repeat Simple_repeat 585 chrUn_NT_473493v1 1934 2989 (CCCTAA)n 596 + 1934 2989 0 3 368,167,449, 0,412,606, +,+,+, 715499 Simple_repeat Simple_repeat 585 chrUn_NT_473493v1 3302 4019 (CCCTAA)n 601 + 3302 4019 0 2 176,511, 0,206, +,+, 715503 Simple_repeat Simple_repeat 585 chrUn_NT_473493v1 4076 4864 (CCCTAA)n 606 + 4076 4864 0 3 197,236,181, 0,197,607, +,+,+, 715505 Simple_repeat Simple_repeat 585 chrUn_NT_473493v1 4963 5564 (CCCTAA)n 633 + 4963 5564 0 2 220,334, 0,267, +,+, 715508 Simple_repeat Simple_repeat 585 chrUn_NT_473500v1 1075 1676 (ACCCATAGGG)n 619 + 1075 1676 0 3 133,304,103, 0,133,498, +,+,+, 715549 Satellite Satellite 585 chrUn_NT_473500v1 1729 2128 (ACCCATAGAG)n 600 + 1729 2128 0 2 123,154, 0,245, +,+, 715550 Satellite Satellite 585 chrUn_NT_473500v1 2192 2789 (ACCCATAGGG)n 438 + 2192 2789 0 4 19,85,92,271, 0,87,223,326, +,+,+,+, 715552 Satellite Satellite 585 chrUn_NT_473500v1 3922 4736 (ACCCATAGAG)n 486 + 3922 4736 0 2 268,419, 0,395, +,+, 715559 Satellite Satellite 585 chrUn_NT_473500v1 4843 5423 (ACCCATAGAG)n 522 + 4843 5423 0 2 277,186, 0,394, +,+, 715562 Satellite Satellite 585 chrUn_NT_473504v1 1098 1556 (ACCCATAGGG)n 797 + 1098 1556 0 3 170,73,17, 0,230,441, +,+,+, 715574 Satellite Satellite 585 chrUn_NT_473504v1 1932 2558 (ACCCATAGGG)n 732 + 1932 2558 0 3 204,107,223, 0,252,403, +,+,+, 715579 Satellite Satellite 585 chrUn_NT_473504v1 3050 4533 (ACCCATAGGG)n 714 + 3050 4533 0 5 387,125,140,314,305, 0,484,666,806,1178, +,+,+,+,+, 715581 Satellite Satellite 585 chrUn_NT_473506v1 640 1419 GGXHOI 315 + 640 1419 0 2 248,513, 0,266, +,+, 715590 Satellite W-chromosome 585 chrUn_NT_473506v1 1523 3469 GGXHOI 400 + 1523 3469 0 2 747,1151, 0,795, +,+, 715591 Satellite W-chromosome 585 chrUn_NT_473506v1 3940 4392 GGXHOI 350 + 3940 4392 0 2 261,176, 0,276, +,+, 715593 Satellite W-chromosome 585 chrUn_NT_473506v1 4652 5101 GGXHOI 405 + 4652 5101 0 2 163,262, 0,187, +,+, 715595 Satellite W-chromosome 585 chrUn_NT_473508v1 3212 3565 (ACCCCATAGGG)n 301 - 3212 3565 0 2 139,161, 0,192, -,-, 715602 Satellite Satellite 585 chrUn_NT_473508v1 4003 4234 (ACCCCATAGGG)n 318 - 4003 4234 0 2 122,91, 0,140, -,-, 715605 Satellite Satellite 585 chrUn_NT_473510v1 105 513 (CCTTG)n 627 + 105 513 0 2 194,214, 0,194, +,+, 715617 Simple_repeat Simple_repeat 585 chrUn_NT_473510v1 728 2651 (CCTTG)n 636 + 728 2651 0 6 292,254,360,192,103,262, 0,474,744,1135,1555,1661, +,+,+,+,+,+, 715619 Simple_repeat Simple_repeat 585 chrUn_NT_473510v1 2944 3526 (CCTTG)n 568 + 2944 3526 0 2 364,193, 0,389, +,+, 715625 Simple_repeat Simple_repeat 585 chrUn_NT_473510v1 3636 5025 (CCTTG)n 565 + 3636 5025 0 5 433,93,100,203,157, 0,446,721,855,1232, +,+,+,+,+, 715627 Simple_repeat Simple_repeat 585 chrUn_NT_473511v1 1573 2194 CR1-H 683 - 1573 2194 0 2 139,476, 0,145, -,-, 715635 LINE CR1 585 chrUn_NT_473511v1 4422 4879 CR1-H 677 - 4422 4879 0 2 163,294, 0,163, -,-, 715639 LINE CR1 585 chrUn_NT_473512v1 3945 4397 CR1-H 659 - 3945 4397 0 2 161,291, 0,161, -,-, 715644 LINE CR1 585 chrUn_NT_473515v1 2189 2724 (TTAGGG)n 454 + 2189 2724 0 2 248,111, 0,424, +,+, 715674 Simple_repeat Simple_repeat 585 chrUn_NT_473515v1 2897 5546 GGXHOI 401 - 2897 5546 0 2 832,1797, 0,852, -,-, 715677 Satellite W-chromosome 585 chrUn_NT_473516v1 1237 3314 GGXHOI 420 + 1237 3314 0 4 338,146,907,647, 0,349,508,1430, +,+,+,+, 715681 Satellite W-chromosome 585 chrUn_NT_473516v1 3399 4394 GGXHOI 428 + 3399 4394 0 3 338,146,487, 0,349,508, +,+,+, 715682 Satellite W-chromosome 585 chrUn_NT_473516v1 4477 4970 GGXHOI 429 + 4477 4970 0 2 336,146, 0,347, +,+, 715683 Satellite W-chromosome 585 chrUn_NT_473520v1 434 529 CR1-E 649 + 434 529 0 2 52,43, 0,52, +,+, 715697 LINE CR1 585 chrUn_NT_473520v1 813 2385 CR1-E 629 + 813 2385 0 3 46,53,52, 0,1043,1520, +,+,+, 715700 LINE CR1 585 chrUn_NT_473520v1 1336 1436 CR1-E 596 + 1336 1436 0 2 52,48, 0,52, +,+, 715706 LINE CR1 585 chrUn_NT_473520v1 1864 2006 CR1-Y2_Aves 568 + 1864 2006 0 2 52,52, 0,90, +,+, 715711 LINE CR1 585 chrUn_NT_473520v1 2579 3848 CR1-E 598 + 2579 3848 0 4 51,58,47,48, 0,982,1174,1221, +,+,+,+, 715715 LINE CR1 585 chrUn_NT_473520v1 4680 4775 CR1-E 621 + 4680 4775 0 2 53,42, 0,53, +,+, 715727 LINE CR1 585 chrUn_NT_473524v1 984 1220 (GCCCCACAGCT)n 358 + 984 1220 0 2 132,92, 0,144, +,+, 715748 Satellite Satellite 585 chrUn_NT_473524v1 4378 4644 (CTCTATGGGG)n 504 + 4378 4644 0 2 109,119, 0,147, +,+, 715762 Satellite Satellite 585 chrUn_NT_473524v1 4628 5144 (GCCCCACAGCT)n 411 - 4628 5144 0 3 112,119,256, 0,123,260, -,-,-, 715763 Satellite Satellite 585 chrUn_NT_473525v1 210 750 (CAGGC)n 518 + 210 750 0 2 90,270, 0,270, +,+, 715768 Simple_repeat Simple_repeat 585 chrUn_NT_473525v1 1086 1613 (CAAGG)n 644 + 1086 1613 0 2 233,273, 0,254, +,+, 715772 Simple_repeat Simple_repeat 585 chrUn_NT_473525v1 1658 4773 (CAAGG)n 555 + 1658 4773 0 9 124,106,358,38,179,586,686,182,201, 0,304,428,973,1061,1264,1870,2556,2914, +,+,+,+,+,+,+,+,+, 715774 Simple_repeat Simple_repeat 585 chrUn_NT_473525v1 4828 5528 (CAAGG)n 595 + 4828 5528 0 3 257,202,184, 0,283,516, +,+,+, 715779 Simple_repeat Simple_repeat 585 chrUn_NT_473527v1 1320 1491 (GTTGTTTCC)n 935 + 1320 1491 0 2 76,43, 0,128, +,+, 715791 Simple_repeat Simple_repeat 585 chrUn_NT_473527v1 2846 3016 (GTTGTTTCC)n 980 + 2846 3016 0 2 69,50, 0,120, +,+, 715796 Simple_repeat Simple_repeat 585 chrUn_NT_473527v1 4750 4921 (GTTGTTTCC)n 922 + 4750 4921 0 2 70,50, 0,121, +,+, 715804 Simple_repeat Simple_repeat 585 chrUn_NT_473528v1 2645 5486 GGXHOI 389 - 2645 5486 0 6 485,245,462,594,176,697, 0,536,800,1307,1912,2144, -,-,-,-,-,-, 715809 Satellite W-chromosome 585 chrUn_NT_473530v1 948 2485 GGXHOI 586 - 948 2485 0 2 407,573, 0,964, -,-, 715819 Satellite W-chromosome 585 chrUn_NT_473530v1 3210 5530 GGXHOI 581 - 3210 5530 0 4 199,234,149,112, 0,1137,1382,2208, -,-,-,-, 715822 Satellite W-chromosome 585 chrUn_NT_473533v1 1831 5524 GGXHOI 367 - 1831 5524 0 4 1585,1011,150,898, 0,1600,2627,2795, -,-,-,-, 715840 Satellite W-chromosome 585 chrUn_NT_473536v1 1550 3539 (TTAGGG)n 617 + 1550 3539 0 8 114,277,278,47,73,188,194,186, 0,287,575,1046,1275,1370,1583,1803, +,+,+,+,+,+,+,+, 715855 Simple_repeat Simple_repeat 585 chrUn_NT_473536v1 3937 5238 (TTAGGG)n 603 + 3937 5238 0 5 181,165,205,206,435, 0,210,423,649,866, +,+,+,+,+, 715861 Simple_repeat Simple_repeat 585 chrUn_NT_473537v1 1882 2422 GGXHOI 436 + 1882 2422 0 3 287,59,136, 0,309,404, +,+,+, 715866 Satellite W-chromosome 585 chrUn_NT_473537v1 3261 4722 GGXHOI 279 + 3261 4722 0 4 163,350,235,627, 0,180,545,834, +,+,+,+, 715869 Satellite W-chromosome 585 chrUn_NT_473537v1 4793 5467 GGXHOI 343 + 4793 5467 0 2 311,328, 0,346, +,+, 715870 Satellite W-chromosome 585 chrUn_NT_473540v1 3301 4264 (ACCCCATAGGG)n 604 - 3301 4264 0 4 185,134,229,235, 0,203,382,728, -,-,-,-, 715898 Satellite Satellite 585 chrUn_NT_473540v1 4072 4339 (ACCCATAGGG)n 471 - 4072 4339 0 3 111,103,53, 0,111,214, -,-,-, 715900 Satellite Satellite 585 chrUn_NT_473542v1 2012 2572 GGXHOI 385 - 2012 2572 0 2 118,413, 0,147, -,-, 715911 Satellite W-chromosome 585 chrUn_NT_473543v1 4570 5497 GGXHOI 398 - 4570 5497 0 2 433,478, 0,449, -,-, 715916 Satellite W-chromosome 585 chrUn_NT_473545v1 885 1426 GGXHOI 523 + 885 1426 0 2 382,145, 0,396, +,+, 715921 Satellite W-chromosome 585 chrUn_NT_473545v1 1771 5513 GGXHOI 432 + 1771 5513 0 4 267,180,2901,290, 0,313,538,3452, +,+,+,+, 715923 Satellite W-chromosome 585 chrUn_NT_473546v1 867 3239 GGXHOI 532 + 867 3239 0 3 1426,371,17, 0,1655,2355, +,+,+, 715926 Satellite W-chromosome 585 chrUn_NT_473546v1 4440 5515 GGXHOI 510 + 4440 5515 0 3 70,209,183, 0,393,892, +,+,+, 715932 Satellite W-chromosome 585 chrUn_NT_473547v1 2038 3293 GGXHOI 524 + 2038 3293 0 2 720,301, 0,954, +,+, 715938 Satellite W-chromosome 585 chrUn_NT_473548v1 4209 4980 GGXHOI 330 - 4209 4980 0 2 669,85, 0,686, -,-, 715945 Satellite W-chromosome 585 chrUn_NT_473550v1 1260 1706 (ACCCATTGGG)n 422 - 1260 1706 0 3 88,149,109, 0,131,337, -,-,-, 715966 Satellite Satellite 585 chrUn_NT_473550v1 1911 2223 (ACCCATTGGG)n 420 - 1911 2223 0 2 157,155, 0,157, -,-, 715967 Satellite Satellite 585 chrUn_NT_473550v1 2783 3126 (ACCCCATAGGG)n 386 - 2783 3126 0 2 168,129, 0,214, -,-, 715971 Satellite Satellite 585 chrUn_NT_473552v1 3724 3965 (ACCCATTGGG)n 370 - 3724 3965 0 2 110,111, 0,130, -,-, 715984 Satellite Satellite 585 chrUn_NT_473552v1 4052 4758 (ACCCATTGGG)n 334 - 4052 4758 0 3 155,122,336, 0,190,370, -,-,-, 715985 Satellite Satellite 585 chrUn_NT_473554v1 1581 2778 (TTAGGG)n 587 + 1581 2778 0 3 144,38,821, 0,323,376, +,+,+, 715992 Simple_repeat Simple_repeat 585 chrUn_NT_473554v1 3803 4464 (TTAGGG)n 548 + 3803 4464 0 3 145,38,286, 0,324,375, +,+,+, 715997 Simple_repeat Simple_repeat 585 chrUn_NT_473559v1 1140 1336 (TTAGG)n 570 + 1140 1336 0 2 16,7, 0,189, +,+, 716031 Simple_repeat Simple_repeat 585 chrUn_NT_473559v1 1359 2539 (TTAGGG)n 616 + 1359 2539 0 4 351,295,101,218, 0,362,843,962, +,+,+,+, 716034 Simple_repeat Simple_repeat 585 chrUn_NT_473559v1 3406 4204 (TTAGGG)n 600 + 3406 4204 0 3 415,107,56, 0,430,742, +,+,+, 716039 Simple_repeat Simple_repeat 585 chrUn_NT_473559v1 4265 4662 (TTAGGG)n 578 + 4265 4662 0 2 182,215, 0,182, +,+, 716042 Simple_repeat Simple_repeat 585 chrUn_NT_473559v1 4953 5485 (TTAGGG)n 566 + 4953 5485 0 2 175,329, 0,203, +,+, 716045 Simple_repeat Simple_repeat 585 chrUn_NT_473563v1 961 1365 (CTCTATGGGG)n 694 - 961 1365 0 2 148,20, 0,384, -,-, 716067 Satellite Satellite 585 chrUn_NT_473563v1 1514 1782 (CTCTATGGGG)n 733 + 1514 1782 0 2 122,123, 0,145, +,+, 716070 Satellite Satellite 585 chrUn_NT_473563v1 1929 2332 (CTCTATGGGG)n 750 - 1929 2332 0 2 173,104, 0,299, -,-, 716072 Satellite Satellite 585 chrUn_NT_473563v1 2439 2967 (CTCTATGGGG)n 713 + 2439 2967 0 3 247,123,123, 0,259,405, +,+,+, 716075 Satellite Satellite 585 chrUn_NT_473563v1 3432 3975 (CTCTATGGGG)n 751 + 3432 3975 0 3 121,135,143, 0,143,400, +,+,+, 716079 Satellite Satellite 585 chrUn_NT_473563v1 3875 4129 (ACCCATAGAG)n 727 - 3875 4129 0 2 119,120, 0,134, -,-, 716081 Satellite Satellite 585 chrUn_NT_473563v1 4141 4642 (ACCCATAGGG)n 728 - 4141 4642 0 2 118,163, 0,338, -,-, 716082 Satellite Satellite 585 chrUn_NT_473567v1 690 4156 GGXHOI 360 - 690 4156 0 13 562,142,144,262,122,452,125,121,318,211,183,169,340, 0,594,787,951,1224,1375,1841,1989,2127,2489,2736,2943,3126, -,-,-,-,-,-,-,-,-,-,-,-,-, 716104 Satellite W-chromosome 585 chrUn_NT_473567v1 4235 5484 GGXHOI 443 - 4235 5484 0 3 202,166,847, 0,222,402, -,-,-, 716105 Satellite W-chromosome 585 chrUn_NT_473568v1 109 4418 GGXHOI 445 + 109 4418 0 3 818,1578,1874, 0,836,2435, +,+,+, 716108 Satellite W-chromosome 585 chrUn_NT_473570v1 4180 5468 GGXHOI 369 - 4180 5468 0 2 437,836, 0,452, -,-, 716126 Satellite W-chromosome 585 chrUn_NT_473574v1 160 1350 (CGAGG)n 516 + 160 1350 0 4 241,112,192,250, 0,422,569,940, +,+,+,+, 716136 Simple_repeat Simple_repeat 585 chrUn_NT_473574v1 2000 3316 (CGAGG)n 559 + 2000 3316 0 5 268,218,179,189,178, 0,445,698,919,1138, +,+,+,+,+, 716142 Simple_repeat Simple_repeat 585 chrUn_NT_473574v1 3929 4193 (GGCGG)n 166 + 3929 4193 0 2 24,198, 0,66, +,+, 716146 Simple_repeat Simple_repeat 585 chrUn_NT_473574v1 4549 5477 (CGAGG)n 527 + 4549 5477 0 3 376,171,199, 0,558,729, +,+,+, 716150 Simple_repeat Simple_repeat 585 chrUn_NT_473580v1 967 1345 GGXHOI 329 + 967 1345 0 2 126,202, 0,176, +,+, 716185 Satellite W-chromosome 585 chrUn_NT_473580v1 1416 5486 GGXHOI 404 + 1416 5486 0 6 263,1150,302,416,1490,313, 0,283,1491,1824,2251,3757, +,+,+,+,+,+, 716186 Satellite W-chromosome 585 chrUn_NT_473582v1 4538 5459 GGXHOI 605 - 4538 5459 0 2 247,663, 0,258, -,-, 716196 Satellite W-chromosome 585 chrUn_NT_473585v1 2620 2716 (ACCCTA)n 841 + 2620 2716 0 2 47,34, 0,62, +,+, 716226 Simple_repeat Simple_repeat 585 chrUn_NT_473585v1 3178 3407 (ACCCTA)n 617 + 3178 3407 0 2 38,155, 0,74, +,+, 716229 Simple_repeat Simple_repeat 585 chrUn_NT_473585v1 4149 4464 (ACCCTA)n 714 + 4149 4464 0 2 27,270, 0,45, +,+, 716234 Simple_repeat Simple_repeat 585 chrUn_NT_473585v1 4736 4829 (ACCCTA)n 1000 + 4736 4829 0 2 32,28, 0,65, +,+, 716237 Simple_repeat Simple_repeat 585 chrUn_NT_473588v1 1968 2039 (G)n 798 + 1968 2039 0 2 30,19, 0,52, +,+, 716263 Simple_repeat Simple_repeat 585 chrUn_NT_473590v1 1805 2311 CR1-H 527 + 1805 2311 0 3 218,141,138, 0,218,368, +,+,+, 716274 LINE CR1 585 chrUn_NT_473591v1 236 2597 GGXHOI 568 - 236 2597 0 3 152,329,32, 0,1653,2329, -,-,-, 716277 Satellite W-chromosome 585 chrUn_NT_473592v1 206 1614 (CCCTAA)n 619 + 206 1614 0 4 267,107,159,499, 0,448,572,909, +,+,+,+, 716282 Simple_repeat Simple_repeat 585 chrUn_NT_473592v1 1657 3337 (CCCTAA)n 653 + 1657 3337 0 4 253,32,107,899, 0,436,657,781, +,+,+,+, 716286 Simple_repeat Simple_repeat 585 chrUn_NT_473592v1 3723 5467 (CCCTAA)n 560 + 3723 5467 0 5 540,185,377,151,384, 0,558,771,1192,1360, +,+,+,+,+, 716292 Simple_repeat Simple_repeat 585 chrUn_NT_473595v1 352 1516 CR1-F 563 + 352 1516 0 4 180,150,191,175, 0,225,661,989, +,+,+,+, 716300 LINE CR1 585 chrUn_NT_473595v1 1558 3620 CR1-F 528 + 1558 3620 0 6 199,204,204,155,197,182, 0,241,487,957,1407,1880, +,+,+,+,+,+, 716302 LINE CR1 585 chrUn_NT_473595v1 3663 5448 CR1-F 546 + 3663 5448 0 6 203,203,205,153,201,136, 0,245,490,960,1402,1649, +,+,+,+,+,+, 716306 LINE CR1 585 chrUn_NT_473599v1 522 3839 GGXHOI 351 + 522 3839 0 11 170,127,143,730,422,215,118,136,613,253,110, 0,206,351,523,1296,1729,1961,2100,2289,2936,3207, +,+,+,+,+,+,+,+,+,+,+, 716317 Satellite W-chromosome 585 chrUn_NT_473599v1 4495 5411 GGXHOI 413 + 4495 5411 0 3 458,141,271, 0,470,645, +,+,+, 716319 Satellite W-chromosome 585 chrUn_NT_473600v1 2515 5451 GGXHOI 407 - 2515 5451 0 3 756,1660,442, 0,797,2494, -,-,-, 716321 Satellite W-chromosome 585 chrUn_NT_473602v1 2812 5122 GGXHOI 509 + 2812 5122 0 3 1234,290,748, 0,1254,1562, +,+,+, 716329 Satellite W-chromosome 585 chrUn_NT_473606v1 2223 3614 GGLTR7-int 303 - 2223 3614 0 3 277,287,105, 0,971,1286, -,-,-, 716339 LTR ERV1 585 chrUn_NT_473606v1 4307 5448 GGERVL-B-int 698 - 4307 5448 0 2 866,275, 0,866, -,-, 716341 LTR ERVL 585 chrUn_NT_473608v1 51 970 (CGAGG)n 524 + 51 970 0 4 329,178,196,174, 0,359,537,745, +,+,+,+, 716350 Simple_repeat Simple_repeat 585 chrUn_NT_473608v1 2166 2661 (CGAGG)n 520 + 2166 2661 0 2 181,295, 0,200, +,+, 716356 Simple_repeat Simple_repeat 585 chrUn_NT_473608v1 2906 3393 (CGAGG)n 537 + 2906 3393 0 2 290,181, 0,306, +,+, 716358 Simple_repeat Simple_repeat 585 chrUn_NT_473608v1 3460 3953 (CGAGG)n 486 + 3460 3953 0 2 164,150, 0,343, +,+, 716360 Simple_repeat Simple_repeat 585 chrUn_NT_473609v1 2816 5446 GGXHOI 364 - 2816 5446 0 2 377,2237, 0,393, -,-, 716371 Satellite W-chromosome 585 chrUn_NT_473611v1 1929 2338 Sat-CR1_GG 142 - 1929 2338 0 2 26,228, 0,181, -,-, 716379 Satellite Satellite 585 chrUn_NT_473611v1 2122 3005 GGXHOI 547 - 2122 3005 0 3 372,17,102, 0,441,781, -,-,-, 716381 Satellite W-chromosome 585 chrUn_NT_473611v1 4037 5093 GGXHOI 532 - 4037 5093 0 3 131,113,356, 0,332,700, -,-,-, 716385 Satellite W-chromosome 585 chrUn_NT_473612v1 1758 5440 CR1-Y1_Aves 480 - 1758 5440 0 2 274,61, 0,3621, -,-, 716393 LINE CR1 585 chrUn_NT_473612v1 2281 2985 Charlie12_GG 488 - 2281 2985 0 2 518,186, 0,518, -,-, 716395 DNA hAT-Charlie 585 chrUn_NT_473612v1 2985 3233 CR1-Y4 513 + 2985 3233 0 2 187,61, 0,187, +,+, 716396 LINE CR1 585 chrUn_NT_473612v1 3232 5377 CR1-Y 539 - 3232 5377 0 3 225,183,376, 0,1318,1769, -,-,-, 716397 LINE CR1 585 chrUn_NT_473615v1 1234 3492 GGXHOI 385 - 1234 3492 0 4 268,147,1416,378, 0,284,447,1880, -,-,-,-, 716412 Satellite W-chromosome 585 chrUn_NT_473615v1 3796 5019 GGXHOI 340 - 3796 5019 0 3 312,485,313, 0,369,910, -,-,-, 716413 Satellite W-chromosome 585 chrUn_NT_473617v1 4558 5439 GGXHOI 363 - 4558 5439 0 2 218,638, 0,243, -,-, 716419 Satellite W-chromosome 585 chrUn_NT_473618v1 2301 2796 Sat-CR1_GG 196 - 2301 2796 0 2 235,215, 0,280, -,-, 716426 Satellite Satellite 585 chrUn_NT_473625v1 4362 5435 GGERVL-B-int 740 - 4362 5435 0 2 824,216, 0,857, -,-, 716476 LTR ERVL 585 chrUn_NT_473628v1 390 887 (CGAGG)n 500 + 390 887 0 2 112,209, 0,288, +,+, 716483 Simple_repeat Simple_repeat 585 chrUn_NT_473628v1 2239 2525 (CGAGG)n 450 + 2239 2525 0 2 57,182, 0,104, +,+, 716491 Simple_repeat Simple_repeat 585 chrUn_NT_473628v1 2608 3007 (CAAGG)n 407 + 2608 3007 0 2 179,176, 0,223, +,+, 716492 Simple_repeat Simple_repeat 585 chrUn_NT_473628v1 3100 4228 (CGAGG)n 530 + 3100 4228 0 4 177,343,171,357, 0,202,562,771, +,+,+,+, 716494 Simple_repeat Simple_repeat 585 chrUn_NT_473628v1 4349 4892 (CGAGG)n 515 + 4349 4892 0 2 348,178, 0,365, +,+, 716496 Simple_repeat Simple_repeat 585 chrUn_NT_473630v1 1281 4643 GGXHOI 530 - 1281 4643 0 6 185,296,149,371,185,493, 0,543,1161,1629,2323,2869, -,-,-,-,-,-, 716507 Satellite W-chromosome 585 chrUn_NT_473630v1 4688 5432 GGXHOI 511 - 4688 5432 0 3 236,21,159, 0,249,585, -,-,-, 716514 Satellite W-chromosome 585 chrUn_NT_473635v1 1340 3565 (CCTTG)n 611 + 1340 3565 0 7 400,89,397,273,93,136,235, 0,617,706,1114,1566,1829,1990, +,+,+,+,+,+,+, 716534 Simple_repeat Simple_repeat 585 chrUn_NT_473635v1 4063 4793 (CCTTG)n 598 + 4063 4793 0 2 183,526, 0,204, +,+, 716542 Simple_repeat Simple_repeat 585 chrUn_NT_473635v1 4839 5427 (CCTTG)n 572 + 4839 5427 0 2 114,297, 0,291, +,+, 716544 Simple_repeat Simple_repeat 585 chrUn_NT_473637v1 3092 3192 (G)n 907 + 3092 3192 0 2 23,17, 0,83, +,+, 716550 Simple_repeat Simple_repeat 585 chrUn_NT_473640v1 3616 4048 (ATGGTG)n 684 + 3616 4048 0 2 198,54, 0,378, +,+, 716586 Simple_repeat Simple_repeat 585 chrUn_NT_473640v1 4006 4744 (ATG)n 608 + 4006 4744 0 2 416,309, 0,429, +,+, 716588 Simple_repeat Simple_repeat 585 chrUn_NT_473640v1 4943 5415 (ATG)n 722 + 4943 5415 0 2 253,219, 0,253, +,+, 716590 Simple_repeat Simple_repeat 585 chrUn_NT_473643v1 2624 4045 GGXHOI 518 - 2624 4045 0 2 532,442, 0,979, -,-, 716600 Satellite W-chromosome 585 chrUn_NT_473643v1 3850 4269 Sat-CR1_GG 130 - 3850 4269 0 2 236,45, 0,374, -,-, 716602 Satellite Satellite 585 chrUn_NT_473643v1 4240 5365 GGXHOI 532 - 4240 5365 0 2 554,374, 0,751, -,-, 716604 Satellite W-chromosome 585 chrUn_NT_473645v1 3266 3810 GGXHOI 393 + 3266 3810 0 2 229,300, 0,244, +,+, 716610 Satellite W-chromosome 585 chrUn_NT_473647v1 502 1995 (CCTTG)n 607 + 502 1995 0 4 500,214,159,105, 0,516,731,1388, +,+,+,+, 716616 Simple_repeat Simple_repeat 585 chrUn_NT_473647v1 1590 1890 (GCCTG)n 522 + 1590 1890 0 2 105,17, 0,283, +,+, 716619 Simple_repeat Simple_repeat 585 chrUn_NT_473647v1 2510 3507 (CCTTG)n 568 + 2510 3507 0 3 241,479,183, 0,294,814, +,+,+, 716621 Simple_repeat Simple_repeat 585 chrUn_NT_473647v1 3651 4012 (CCTTG)n 586 + 3651 4012 0 2 110,67, 0,294, +,+, 716623 Simple_repeat Simple_repeat 585 chrUn_NT_473647v1 4404 5417 (CCTTG)n 569 + 4404 5417 0 3 283,133,388, 0,465,625, +,+,+, 716628 Simple_repeat Simple_repeat 585 chrUn_NT_473652v1 2600 2880 (CTCTATGGGG)n 539 - 2600 2880 0 2 117,110, 0,170, -,-, 716648 Satellite Satellite 585 chrUn_NT_473653v1 2728 4110 GGLTR7-int 310 - 2728 4110 0 3 279,227,98, 0,1055,1284, -,-,-, 716651 LTR ERV1 585 chrUn_NT_473654v1 1524 1807 (CTCTATGGGG)n 561 - 1524 1807 0 2 123,112, 0,171, -,-, 716658 Satellite Satellite 585 chrUn_NT_473654v1 3810 4252 (ACCCCATAGGG)n 304 - 3810 4252 0 2 255,150, 0,292, -,-, 716660 Satellite Satellite 585 chrUn_NT_473655v1 40 440 (TTAGGG)n 666 + 40 440 0 2 182,176, 0,224, +,+, 716665 Simple_repeat Simple_repeat 585 chrUn_NT_473655v1 532 1579 (TTAGGG)n 692 + 532 1579 0 2 137,732, 0,315, +,+, 716667 Simple_repeat Simple_repeat 585 chrUn_NT_473655v1 1602 4310 (TTAGGG)n 541 + 1602 4310 0 8 377,186,372,255,201,538,184,384, 0,401,631,1026,1324,1575,2126,2324, +,+,+,+,+,+,+,+, 716670 Simple_repeat Simple_repeat 585 chrUn_NT_473660v1 880 1467 (ACCCCATAGGG)n 518 - 880 1467 0 3 254,39,43, 0,384,544, -,-,-, 716696 Satellite Satellite 585 chrUn_NT_473660v1 1134 1424 (ACCCATAGGG)n 409 - 1134 1424 0 2 130,121, 0,169, -,-, 716697 Satellite Satellite 585 chrUn_NT_473661v1 1250 2905 GGXHOI 395 + 1250 2905 0 3 392,1079,147, 0,412,1508, +,+,+, 716703 Satellite W-chromosome 585 chrUn_NT_473661v1 4162 5136 GGXHOI 377 + 4162 5136 0 2 441,516, 0,458, +,+, 716705 Satellite W-chromosome 585 chrUn_NT_473662v1 4526 5401 GGLTR7-int 271 - 4526 5401 0 2 276,552, 0,323, -,-, 716710 LTR ERV1 585 chrUn_NT_473663v1 2377 2518 (TTAGGG)n 883 + 2377 2518 0 2 55,51, 0,90, +,+, 716725 Simple_repeat Simple_repeat 585 chrUn_NT_473663v1 4652 4768 (GGTTAG)n 763 + 4652 4768 0 2 37,48, 0,68, +,+, 716738 Simple_repeat Simple_repeat 585 chrUn_NT_473663v1 5130 5219 (GGGTTA)n 905 + 5130 5219 0 2 34,39, 0,50, +,+, 716741 Simple_repeat Simple_repeat 585 chrUn_NT_473666v1 1327 4650 GGXHOI 375 - 1327 4650 0 3 1270,641,1374, 0,1292,1949, -,-,-, 716750 Satellite W-chromosome 585 chrUn_NT_473667v1 1870 2489 CR1-H 369 + 1870 2489 0 2 208,377, 0,242, +,+, 716754 LINE CR1 585 chrUn_NT_473667v1 4107 4730 CR1-H 367 + 4107 4730 0 2 208,379, 0,244, +,+, 716756 LINE CR1 585 chrUn_NT_473668v1 901 2396 GGXHOI 403 + 901 2396 0 2 1024,410, 0,1085, +,+, 716759 Satellite W-chromosome 585 chrUn_NT_473668v1 2480 3630 GGXHOI 340 + 2480 3630 0 3 283,461,330, 0,336,820, +,+,+, 716760 Satellite W-chromosome 585 chrUn_NT_473668v1 4815 5396 GGXHOI 345 + 4815 5396 0 2 146,417, 0,164, +,+, 716763 Satellite W-chromosome 585 chrUn_NT_473669v1 975 1607 (ACCCATAGAG)n 624 - 975 1607 0 2 359,237, 0,395, -,-, 716767 Satellite Satellite 585 chrUn_NT_473669v1 3138 3415 (ACCCATAGAG)n 665 - 3138 3415 0 2 122,155, 0,122, -,-, 716777 Satellite Satellite 585 chrUn_NT_473669v1 3698 4295 (ACCCATAGAG)n 659 - 3698 4295 0 3 347,60,75, 0,347,522, -,-,-, 716779 Satellite Satellite 585 chrUn_NT_473669v1 4631 5244 (ACCCATAGAG)n 675 - 4631 5244 0 3 123,165,205, 0,123,408, -,-,-, 716782 Satellite Satellite 585 chrUn_NT_473670v1 2374 2942 CR1-H 420 + 2374 2942 0 2 436,129, 0,439, +,+, 716787 LINE CR1 585 chrUn_NT_473672v1 3549 5232 GGXHOI 379 - 3549 5232 0 3 723,207,700, 0,746,983, -,-,-, 716797 Satellite W-chromosome 585 chrUn_NT_473675v1 515 4965 ENS1-LTR 805 - 515 4965 0 3 869,2840,741, 0,869,3709, -,-,-, 716828 LTR ERVL 585 chrUn_NT_473681v1 3746 4154 Sat-CR1_GG 170 - 3746 4154 0 2 167,77, 0,331, -,-, 716857 Satellite Satellite 585 chrUn_NT_473683v1 327 1216 (CGAGG)n 501 + 327 1216 0 3 175,494,188, 0,186,701, +,+,+, 716867 Simple_repeat Simple_repeat 585 chrUn_NT_473683v1 1718 3549 (CGAGG)n 550 + 1718 3549 0 5 248,406,263,179,637, 0,262,718,1002,1194, +,+,+,+,+, 716871 Simple_repeat Simple_repeat 585 chrUn_NT_473683v1 4267 4879 (CGAGG)n 534 + 4267 4879 0 3 180,178,183, 0,214,429, +,+,+, 716874 Simple_repeat Simple_repeat 585 chrUn_NT_473683v1 4986 5349 (CGAGG)n 519 + 4986 5349 0 2 181,171, 0,192, +,+, 716876 Simple_repeat Simple_repeat 585 chrUn_NT_473684v1 4884 5312 (GCCCCACAGCT)n 439 + 4884 5312 0 3 119,117,119, 0,146,309, +,+,+, 716882 Satellite Satellite 585 chrUn_NT_473687v1 4101 5020 GGXHOI 380 + 4101 5020 0 2 384,516, 0,403, +,+, 716907 Satellite W-chromosome 585 chrUn_NT_473688v1 1236 3349 GGXHOI 484 + 1236 3349 0 3 1004,461,553, 0,1058,1560, +,+,+, 716911 Satellite W-chromosome 585 chrUn_NT_473688v1 3428 4558 GGXHOI 451 + 3428 4558 0 2 356,194, 0,936, +,+, 716912 Satellite W-chromosome 585 chrUn_NT_473692v1 3662 4079 (ACCCCATAGGG)n 536 - 3662 4079 0 3 112,11,49, 0,236,368, -,-,-, 716954 Satellite Satellite 585 chrUn_NT_473695v1 2067 3020 GGXHOI 560 - 2067 3020 0 2 409,205, 0,748, -,-, 716977 Satellite W-chromosome 585 chrUn_NT_473695v1 3107 5266 GGXHOI 510 - 3107 5266 0 2 539,1280, 0,879, -,-, 716979 Satellite W-chromosome 585 chrUn_NT_473696v1 4338 5371 GGXHOI 383 - 4338 5371 0 2 508,508, 0,525, -,-, 716982 Satellite W-chromosome 585 chrUn_NT_473698v1 2172 2900 (TTAGGG)n 635 + 2172 2900 0 3 188,268,41, 0,217,687, +,+,+, 716992 Simple_repeat Simple_repeat 585 chrUn_NT_473699v1 1360 1414 (CCCCAA)n 426 + 1360 1414 0 2 22,6, 0,48, +,+, 716996 Simple_repeat Simple_repeat 585 chrUn_NT_473699v1 5081 5336 (ACCCATAGGG)n 674 - 5081 5336 0 2 119,115, 0,140, -,-, 717002 Satellite Satellite 585 chrUn_NT_473701v1 1811 3100 GGXHOI 365 + 1811 3100 0 2 376,850, 0,439, +,+, 717007 Satellite W-chromosome 585 chrUn_NT_473701v1 4210 5068 GGXHOI 330 + 4210 5068 0 2 142,682, 0,176, +,+, 717010 Satellite W-chromosome 585 chrUn_NT_473702v1 2061 4241 GGXHOI 550 - 2061 4241 0 4 369,43,64,726, 0,381,737,1454, -,-,-,-, 717015 Satellite W-chromosome 585 chrUn_NT_473702v1 4285 5364 GGXHOI 557 - 4285 5364 0 3 665,156,28, 0,708,1051, -,-,-, 717019 Satellite W-chromosome 585 chrUn_NT_473703v1 914 1705 (CAAGG)n 643 + 914 1705 0 4 178,179,186,186, 0,193,398,605, +,+,+,+, 717025 Simple_repeat Simple_repeat 585 chrUn_NT_473703v1 1764 2586 (CAAGG)n 603 + 1764 2586 0 3 367,7,185, 0,617,637, +,+,+, 717027 Simple_repeat Simple_repeat 585 chrUn_NT_473703v1 2634 3342 (CAAGG)n 647 + 2634 3342 0 3 238,44,229, 0,419,479, +,+,+, 717031 Simple_repeat Simple_repeat 585 chrUn_NT_473703v1 3391 3807 (CAAGG)n 672 + 3391 3807 0 2 190,226, 0,190, +,+, 717035 Simple_repeat Simple_repeat 585 chrUn_NT_473703v1 3828 4721 (CAAGG)n 571 + 3828 4721 0 2 344,538, 0,355, +,+, 717037 Simple_repeat Simple_repeat 585 chrUn_NT_473703v1 4760 5364 (CAAGG)n 565 + 4760 5364 0 3 184,186,175, 0,223,429, +,+,+, 717039 Simple_repeat Simple_repeat 585 chrUn_NT_473704v1 231 1112 CR1-F0 890 + 231 1112 0 2 748,133, 0,748, +,+, 717041 LINE CR1 585 chrUn_NT_473705v1 287 814 (GCCTG)n 526 + 287 814 0 2 101,248, 0,279, +,+, 717048 Simple_repeat Simple_repeat 585 chrUn_NT_473705v1 1803 2440 (CCTTG)n 529 + 1803 2440 0 2 190,423, 0,214, +,+, 717053 Simple_repeat Simple_repeat 585 chrUn_NT_473705v1 2540 3030 (GCCTG)n 414 + 2540 3030 0 2 267,39, 0,451, +,+, 717056 Simple_repeat Simple_repeat 585 chrUn_NT_473705v1 2807 4058 (CCTTG)n 599 + 2807 4058 0 4 184,171,44,149, 0,184,776,1102, +,+,+,+, 717057 Simple_repeat Simple_repeat 585 chrUn_NT_473705v1 3926 4328 (GCCTG)n 432 + 3926 4328 0 2 148,70, 0,332, +,+, 717062 Simple_repeat Simple_repeat 585 chrUn_NT_473705v1 4343 5107 (CCTTG)n 621 + 4343 5107 0 3 177,182,379, 0,203,385, +,+,+, 717064 Simple_repeat Simple_repeat 585 chrUn_NT_473705v1 4884 5241 (GCCTG)n 500 + 4884 5241 0 2 119,65, 0,292, +,+, 717065 Simple_repeat Simple_repeat 585 chrUn_NT_473707v1 799 1794 GGXHOI 420 - 799 1794 0 3 487,146,338, 0,500,657, -,-,-, 717075 Satellite W-chromosome 585 chrUn_NT_473707v1 1879 2870 GGXHOI 415 - 1879 2870 0 3 485,146,336, 0,498,655, -,-,-, 717076 Satellite W-chromosome 585 chrUn_NT_473707v1 3955 4955 GGXHOI 395 - 3955 4955 0 2 651,334, 0,666, -,-, 717079 Satellite W-chromosome 585 chrUn_NT_473710v1 2304 5357 GGXHOI 520 - 2304 5357 0 7 18,563,298,222,282,107,534, 0,328,926,1502,2045,2390,2519, -,-,-,-,-,-,-, 717088 Satellite W-chromosome 585 chrUn_NT_473711v1 2775 4245 GGXHOI 433 - 2775 4245 0 3 665,344,400, 0,687,1070, -,-,-, 717094 Satellite W-chromosome 585 chrUn_NT_473713v1 1455 2527 GGXHOI 332 - 1455 2527 0 4 259,330,356,83, 0,276,622,989, -,-,-,-, 717101 Satellite W-chromosome 585 chrUn_NT_473713v1 2613 3703 GGXHOI 367 - 2613 3703 0 3 139,399,521, 0,154,569, -,-,-, 717102 Satellite W-chromosome 585 chrUn_NT_473713v1 3812 4797 GGXHOI 404 - 3812 4797 0 2 155,803, 0,182, -,-, 717103 Satellite W-chromosome 585 chrUn_NT_473716v1 420 1502 GGXHOI 588 - 420 1502 0 2 114,65, 0,1017, -,-, 717109 Satellite W-chromosome 585 chrUn_NT_473716v1 2314 4295 GGXHOI 603 + 2314 4295 0 4 22,22,126,875, 0,706,967,1106, +,+,+,+, 717112 Satellite W-chromosome 585 chrUn_NT_473718v1 560 999 (CGAGG)n 504 + 560 999 0 2 112,151, 0,288, +,+, 717121 Simple_repeat Simple_repeat 585 chrUn_NT_473718v1 2485 3574 (CGAGG)n 517 + 2485 3574 0 2 177,867, 0,222, +,+, 717132 Simple_repeat Simple_repeat 585 chrUn_NT_473718v1 3765 4602 (CGAGG)n 519 + 3765 4602 0 2 592,186, 0,651, +,+, 717134 Simple_repeat Simple_repeat 585 chrUn_NT_473718v1 4697 5178 (CGAGG)n 470 + 4697 5178 0 2 185,247, 0,234, +,+, 717135 Simple_repeat Simple_repeat 585 chrUn_NT_473719v1 1994 3686 GGXHOI 385 - 1994 3686 0 4 658,266,472,217, 0,675,959,1475, -,-,-,-, 717141 Satellite W-chromosome 585 chrUn_NT_473719v1 3894 4722 GGXHOI 347 - 3894 4722 0 2 172,640, 0,188, -,-, 717142 Satellite W-chromosome 585 chrUn_NT_473722v1 1805 2707 (CCTCG)n 516 + 1805 2707 0 4 180,313,112,48, 0,217,567,854, +,+,+,+, 717155 Simple_repeat Simple_repeat 585 chrUn_NT_473722v1 3271 4884 (CCTCG)n 496 + 3271 4884 0 4 195,341,600,419, 0,226,582,1194, +,+,+,+, 717159 Simple_repeat Simple_repeat 585 chrUn_NT_473723v1 3720 5285 GGXHOI 390 - 3720 5285 0 6 308,261,214,225,294,125, 0,320,627,882,1126,1440, -,-,-,-,-,-, 717168 Satellite W-chromosome 585 chrUn_NT_473726v1 1043 1581 (CGAGG)n 526 + 1043 1581 0 2 169,357, 0,181, +,+, 717205 Simple_repeat Simple_repeat 585 chrUn_NT_473726v1 2245 3416 (CGAGG)n 523 + 2245 3416 0 3 243,674,186, 0,270,985, +,+,+, 717209 Simple_repeat Simple_repeat 585 chrUn_NT_473726v1 5196 5350 (GAGGC)n 198 + 5196 5350 0 2 7,96, 0,58, +,+, 717221 Simple_repeat Simple_repeat 585 chrUn_NT_473729v1 2326 3338 GGXHOI 443 - 2326 3338 0 2 587,366, 0,646, -,-, 717229 Satellite W-chromosome 585 chrUn_NT_473729v1 4324 5344 GGXHOI 437 - 4324 5344 0 2 486,518, 0,502, -,-, 717231 Satellite W-chromosome 585 chrUn_NT_473730v1 796 5347 GGXHOI 551 - 796 5347 0 3 2168,946,1172, 0,2371,3379, -,-,-, 717234 Satellite W-chromosome 585 chrUn_NT_473734v1 3807 5275 GGXHOI 447 - 3807 5275 0 3 744,298,361, 0,762,1107, -,-,-, 717272 Satellite W-chromosome 585 chrUn_NT_473735v1 3399 5325 GGXHOI 408 - 3399 5325 0 2 594,1315, 0,611, -,-, 717275 Satellite W-chromosome 585 chrUn_NT_473736v1 1013 1287 CR1-X2 370 + 1013 1287 0 2 64,210, 0,64, +,+, 717277 LINE CR1 585 chrUn_NT_473738v1 540 2404 GGXHOI 389 - 540 2404 0 4 476,235,622,438, 0,495,788,1426, -,-,-,-, 717288 Satellite W-chromosome 585 chrUn_NT_473738v1 2544 4282 GGXHOI 403 - 2544 4282 0 4 233,431,495,529, 0,252,695,1209, -,-,-,-, 717289 Satellite W-chromosome 585 chrUn_NT_473738v1 4369 5340 GGXHOI 359 - 4369 5340 0 2 253,691, 0,280, -,-, 717290 Satellite W-chromosome 585 chrUn_NT_473739v1 1771 2193 (ACCCATAGAG)n 680 + 1771 2193 0 3 121,33,117, 0,220,305, +,+,+, 717295 Satellite Satellite 585 chrUn_NT_473739v1 2307 2941 (ACCCATAGAG)n 678 + 2307 2941 0 3 345,118,139, 0,356,495, +,+,+, 717298 Satellite Satellite 585 chrUn_NT_473742v1 1098 2366 GGXHOI 494 - 1098 2366 0 2 394,434, 0,834, -,-, 717309 Satellite W-chromosome 585 chrUn_NT_473742v1 2406 4676 GGXHOI 522 - 2406 4676 0 4 269,257,186,493, 0,663,1232,1777, -,-,-,-, 717312 Satellite W-chromosome 585 chrUn_NT_473747v1 3680 4553 GGXHOI 360 - 3680 4553 0 2 341,469, 0,404, -,-, 717338 Satellite W-chromosome 585 chrUn_NT_473750v1 875 2231 GGLTR7-int 387 + 875 2231 0 3 69,230,290, 0,72,1066, +,+,+, 717354 LTR ERV1 585 chrUn_NT_473752v1 2034 4109 (CCCCATTGGG)n 548 + 2034 4109 0 6 117,246,628,476,117,299, 0,129,375,1121,1648,1776, +,+,+,+,+,+, 717364 Satellite Satellite 585 chrUn_NT_473752v1 4487 5011 (CCCCATTGGG)n 551 + 4487 5011 0 3 121,169,109, 0,133,415, +,+,+, 717369 Satellite Satellite 585 chrUn_NT_473753v1 1775 5310 GGXHOI 416 + 1775 5310 0 4 2018,296,467,658, 0,2034,2393,2877, +,+,+,+, 717374 Satellite W-chromosome 585 chrUn_NT_473754v1 2142 4234 GGXHOI 521 - 2142 4234 0 2 397,1680, 0,412, -,-, 717378 Satellite W-chromosome 585 chrUn_NT_473755v1 4904 5010 (C)n 712 + 4904 5010 0 2 34,26, 0,80, +,+, 717383 Simple_repeat Simple_repeat 585 chrUn_NT_473756v1 988 5317 GGXHOI 370 + 988 5317 0 2 2180,2123, 0,2206, +,+, 717386 Satellite W-chromosome 585 chrUn_NT_473757v1 3057 5317 GGXHOI 390 - 3057 5317 0 3 417,1321,487, 0,435,1773, -,-,-, 717389 Satellite W-chromosome 585 chrUn_NT_473758v1 1289 1630 (ACCCCATAGGG)n 534 - 1289 1630 0 2 151,172, 0,169, -,-, 717395 Satellite Satellite 585 chrUn_NT_473759v1 300 2625 GGXHOI 311 + 300 2625 0 4 1312,471,148,306, 0,1348,1833,2019, +,+,+,+, 717401 Satellite W-chromosome 585 chrUn_NT_473759v1 3686 5316 GGXHOI 370 + 3686 5316 0 3 317,809,469, 0,336,1161, +,+,+, 717404 Satellite W-chromosome 585 chrUn_NT_473761v1 2942 3297 GGXHOI 318 - 2942 3297 0 2 102,200, 0,155, -,-, 717410 Satellite W-chromosome 585 chrUn_NT_473761v1 3595 5305 GGXHOI 344 - 3595 5305 0 2 1396,301, 0,1409, -,-, 717411 Satellite W-chromosome 585 chrUn_NT_473762v1 1936 2866 GGXHOI 357 - 1936 2866 0 2 703,191, 0,739, -,-, 717414 Satellite W-chromosome 585 chrUn_NT_473762v1 2958 5248 GGXHOI 379 - 2958 5248 0 4 160,282,1497,286, 0,172,489,2004, -,-,-,-, 717415 Satellite W-chromosome 585 chrUn_NT_473764v1 2369 2943 GGXHOI 368 - 2369 2943 0 2 356,171, 0,403, -,-, 717428 Satellite W-chromosome 585 chrUn_NT_473764v1 3281 5312 GGXHOI 395 - 3281 5312 0 3 943,144,870, 0,970,1161, -,-,-, 717429 Satellite W-chromosome 585 chrUn_NT_473765v1 137 529 (CAAGG)n 616 + 137 529 0 2 169,223, 0,169, +,+, 717431 Simple_repeat Simple_repeat 585 chrUn_NT_473765v1 1649 4736 (CAAGG)n 619 + 1649 4736 0 10 519,232,187,181,177,230,185,402,178,289, 0,680,964,1169,1378,1565,1831,2043,2607,2798, +,+,+,+,+,+,+,+,+,+, 717439 Simple_repeat Simple_repeat 585 chrUn_NT_473765v1 4842 5313 (CAAGG)n 585 + 4842 5313 0 2 214,219, 0,252, +,+, 717443 Simple_repeat Simple_repeat 585 chrUn_NT_473768v1 2482 5312 GGXHOI 444 - 2482 5312 0 5 597,532,375,143,1095, 0,609,1162,1550,1735, -,-,-,-,-, 717455 Satellite W-chromosome 585 chrUn_NT_473769v1 1877 3370 GGXHOI 380 - 1877 3370 0 2 386,1044, 0,449, -,-, 717458 Satellite W-chromosome 585 chrUn_NT_473769v1 3550 5226 GGXHOI 370 - 3550 5226 0 2 1007,606, 0,1070, -,-, 717459 Satellite W-chromosome 585 chrUn_NT_473770v1 3202 4395 GGXHOI 376 + 3202 4395 0 2 599,583, 0,610, +,+, 717465 Satellite W-chromosome 585 chrUn_NT_473771v1 2733 3989 CR1-H 509 - 2733 3989 0 2 110,1145, 0,111, -,-, 717472 LINE CR1 585 chrUn_NT_473772v1 2689 5302 GGXHOI 361 + 2689 5302 0 2 796,1773, 0,840, +,+, 717474 Satellite W-chromosome 585 chrUn_NT_473776v1 2548 4497 GGXHOI 387 + 2548 4497 0 2 145,1745, 0,204, +,+, 717482 Satellite W-chromosome 585 chrUn_NT_473779v1 1530 1875 (CTCTATGGGG)n 554 + 1530 1875 0 2 101,226, 0,119, +,+, 717498 Satellite Satellite 585 chrUn_NT_473780v1 2214 2532 (TTAGGC)n 434 + 2214 2532 0 2 105,35, 0,283, +,+, 717510 Simple_repeat Simple_repeat 585 chrUn_NT_473780v1 2827 3369 (TTAGGG)n 614 + 2827 3369 0 2 183,317, 0,225, +,+, 717513 Simple_repeat Simple_repeat 585 chrUn_NT_473780v1 3368 5291 (CCCTAA)n 589 + 3368 5291 0 7 269,298,198,196,164,60,281, 0,476,774,992,1220,1572,1642, +,+,+,+,+,+,+, 717514 Simple_repeat Simple_repeat 585 chrUn_NT_473782v1 1359 4991 GGXHOI 364 + 1359 4991 0 6 863,924,132,791,281,464, 0,919,1862,2026,2849,3168, +,+,+,+,+,+, 717525 Satellite W-chromosome 585 chrUn_NT_473784v1 709 2586 GGLTR7-int 614 - 709 2586 0 5 35,50,762,28,345, 0,35,715,1504,1532, -,-,-,-,-, 717528 LTR ERV1 585 chrUn_NT_473785v1 2193 2442 (ACCCCATAGGG)n 435 + 2193 2442 0 2 102,129, 0,120, +,+, 717535 Satellite Satellite 585 chrUn_NT_473785v1 3959 4282 (ACCCATAGGG)n 395 + 3959 4282 0 2 147,125, 0,198, +,+, 717546 Satellite Satellite 585 chrUn_NT_473785v1 4334 4770 (ACCCCATAGGG)n 346 + 4334 4770 0 2 130,245, 0,191, +,+, 717547 Satellite Satellite 585 chrUn_NT_473788v1 80 1249 (CGAGG)n 520 + 80 1249 0 5 182,124,108,177,348, 0,195,496,644,821, +,+,+,+,+, 717577 Simple_repeat Simple_repeat 585 chrUn_NT_473788v1 1483 3364 (CGAGG)n 551 + 1483 3364 0 6 506,26,195,53,189,305, 0,682,744,1121,1350,1576, +,+,+,+,+,+, 717581 Simple_repeat Simple_repeat 585 chrUn_NT_473788v1 3471 4098 (CGAGG)n 520 + 3471 4098 0 2 182,413, 0,214, +,+, 717586 Simple_repeat Simple_repeat 585 chrUn_NT_473788v1 4435 5019 (CGAGG)n 531 + 4435 5019 0 3 152,36,189, 0,337,395, +,+,+, 717590 Simple_repeat Simple_repeat 585 chrUn_NT_473789v1 2041 3815 GGXHOI 398 + 2041 3815 0 5 525,146,242,611,149, 0,583,741,997,1625, +,+,+,+,+, 717597 Satellite W-chromosome 585 chrUn_NT_473789v1 3884 5178 GGXHOI 416 + 3884 5178 0 3 402,329,502, 0,444,792, +,+,+, 717598 Satellite W-chromosome 585 chrUn_NT_473793v1 1500 4153 GGXHOI 443 + 1500 4153 0 4 145,1331,444,619, 0,195,1579,2034, +,+,+,+, 717608 Satellite W-chromosome 585 chrUn_NT_473794v1 2338 4348 GGLTR7-int 623 - 2338 4348 0 3 35,49,1298, 0,35,712, -,-,-, 717613 LTR ERV1 585 chrUn_NT_473796v1 1397 1589 (ACCCATAGAG)n 636 - 1397 1589 0 2 58,19, 0,173, -,-, 717622 Satellite Satellite 585 chrUn_NT_473796v1 2148 2606 (ACCCATAGGG)n 518 - 2148 2606 0 3 127,78,129, 0,251,329, -,-,-, 717626 Satellite Satellite 585 chrUn_NT_473798v1 3261 4828 GGXHOI 405 + 3261 4828 0 4 254,376,632,244, 0,275,669,1323, +,+,+,+, 717633 Satellite W-chromosome 585 chrUn_NT_473801v1 363 885 GGLTR3F2 590 - 363 885 0 2 257,235, 0,287, -,-, 717644 LTR ERVL 585 chrUn_NT_473803v1 2348 2430 (G)n 869 + 2348 2430 0 2 26,18, 0,64, +,+, 717652 Simple_repeat Simple_repeat 585 chrUn_NT_473806v1 866 1929 GGXHOI 345 - 866 1929 0 3 469,129,391, 0,486,672, -,-,-, 717657 Satellite W-chromosome 585 chrUn_NT_473806v1 2013 2484 GGXHOI 314 - 2013 2484 0 2 290,137, 0,334, -,-, 717658 Satellite W-chromosome 585 chrUn_NT_473808v1 304 4643 GGXHOI 495 + 304 4643 0 5 1172,97,187,2057,466, 0,1195,1313,1541,3873, +,+,+,+,+, 717667 Satellite W-chromosome 585 chrUn_NT_473809v1 3220 4689 GGXHOI 368 - 3220 4689 0 2 1006,400, 0,1069, -,-, 717676 Satellite W-chromosome 585 chrUn_NT_473810v1 4358 4518 (GGAGT)n 198 + 4358 4518 0 2 115,12, 0,148, +,+, 717699 Simple_repeat Simple_repeat 585 chrUn_NT_473812v1 748 990 (ACCCATAGGG)n 606 + 748 990 0 2 70,64, 0,178, +,+, 717708 Satellite Satellite 585 chrUn_NT_473812v1 1393 1616 (ACCCCATAGGG)n 503 + 1393 1616 0 2 86,137, 0,86, +,+, 717713 Satellite Satellite 585 chrUn_NT_473812v1 2030 2408 (ACCCATAGGG)n 596 - 2030 2408 0 2 154,68, 0,310, -,-, 717716 Satellite Satellite 585 chrUn_NT_473812v1 2771 3373 (ACCCATAGGG)n 623 + 2771 3373 0 3 172,243,59, 0,178,543, +,+,+, 717720 Satellite Satellite 585 chrUn_NT_473814v1 130 374 (ACCCATAGAG)n 694 - 130 374 0 2 81,41, 0,203, -,-, 717727 Satellite Satellite 585 chrUn_NT_473814v1 2268 2512 (ACCCATAGAG)n 694 - 2268 2512 0 2 81,41, 0,203, -,-, 717739 Satellite Satellite 585 chrUn_NT_473814v1 3385 3742 (CTCTATGGGG)n 648 + 3385 3742 0 2 124,27, 0,330, +,+, 717745 Satellite Satellite 585 chrUn_NT_473814v1 3816 4090 (ACCCCATAGGG)n 680 - 3816 4090 0 2 79,72, 0,202, -,-, 717748 Satellite Satellite 585 chrUn_NT_473814v1 5054 5256 (CTCTATGGGG)n 425 - 5054 5256 0 2 13,126, 0,76, -,-, 717755 Satellite Satellite 585 chrUn_NT_473816v1 2415 5257 GGXHOI 428 - 2415 5257 0 5 173,140,630,1190,630, 0,188,350,1002,2212, -,-,-,-,-, 717759 Satellite W-chromosome 585 chrUn_NT_473818v1 2836 3750 GGXHOI 382 - 2836 3750 0 2 420,472, 0,442, -,-, 717765 Satellite W-chromosome 585 chrUn_NT_473818v1 3849 5256 GGXHOI 387 - 3849 5256 0 2 516,828, 0,579, -,-, 717766 Satellite W-chromosome 585 chrUn_NT_473819v1 2950 5042 GGERV28_I-int 210 + 2950 5042 0 3 743,378,340, 0,1071,1752, +,+,+, 717769 LTR ERVK 585 chrUn_NT_473822v1 585 1327 (CAGAG)n 332 + 585 1327 0 3 116,16,309, 0,244,433, +,+,+, 717775 Simple_repeat Simple_repeat 585 chrUn_NT_473822v1 2115 2532 (CAGAG)n 370 + 2115 2532 0 2 116,173, 0,244, +,+, 717781 Simple_repeat Simple_repeat 585 chrUn_NT_473822v1 3205 4363 (CAGAG)n 396 + 3205 4363 0 2 715,27, 0,1131, +,+, 717788 Simple_repeat Simple_repeat 585 chrUn_NT_473826v1 940 3075 GGXHOI 539 + 940 3075 0 3 161,20,1592, 0,510,543, +,+,+, 717799 Satellite W-chromosome 585 chrUn_NT_473826v1 3152 4176 GGXHOI 539 + 3152 4176 0 3 197,147,482, 0,384,542, +,+,+, 717801 Satellite W-chromosome 585 chrUn_NT_473826v1 4254 5242 GGXHOI 526 + 4254 5242 0 2 692,95, 0,893, +,+, 717803 Satellite W-chromosome 585 chrUn_NT_473830v1 144 529 (CGAGG)n 484 + 144 529 0 2 176,168, 0,217, +,+, 717833 Simple_repeat Simple_repeat 585 chrUn_NT_473830v1 2946 3965 (CGAGG)n 516 + 2946 3965 0 3 183,149,662, 0,197,357, +,+,+, 717841 Simple_repeat Simple_repeat 585 chrUn_NT_473830v1 4129 5065 (CGAGG)n 468 + 4129 5065 0 4 181,137,207,189, 0,212,528,747, +,+,+,+, 717843 Simple_repeat Simple_repeat 585 chrUn_NT_473831v1 63 2531 (TTAGGG)n 614 + 63 2531 0 8 275,179,177,198,493,214,382,202, 0,292,493,715,1082,1588,1833,2266, +,+,+,+,+,+,+,+, 717847 Simple_repeat Simple_repeat 585 chrUn_NT_473831v1 2630 3413 (TTAGGG)n 646 + 2630 3413 0 4 184,188,173,177, 0,202,416,606, +,+,+,+, 717849 Simple_repeat Simple_repeat 585 chrUn_NT_473831v1 3749 5240 (TTAGGG)n 547 + 3749 5240 0 4 387,197,738,120, 0,420,617,1371, +,+,+,+, 717852 Simple_repeat Simple_repeat 585 chrUn_NT_473834v1 659 1490 (TTAGGG)n 596 + 659 1490 0 4 197,183,187,182, 0,234,438,649, +,+,+,+, 717860 Simple_repeat Simple_repeat 585 chrUn_NT_473834v1 2399 3224 (TTAGGG)n 616 + 2399 3224 0 4 201,172,189,177, 0,231,447,648, +,+,+,+, 717866 Simple_repeat Simple_repeat 585 chrUn_NT_473834v1 3562 4488 (TTAGGG)n 577 + 3562 4488 0 3 389,132,171, 0,584,755, +,+,+, 717870 Simple_repeat Simple_repeat 585 chrUn_NT_473834v1 4592 5162 (TTAGGG)n 555 + 4592 5162 0 2 370,170, 0,400, +,+, 717872 Simple_repeat Simple_repeat 585 chrUn_NT_473839v1 399 1183 (TTAGGG)n 591 + 399 1183 0 4 183,174,185,177, 0,206,405,607, +,+,+,+, 717892 Simple_repeat Simple_repeat 585 chrUn_NT_473839v1 2009 4204 (TTAGGG)n 589 + 2009 4204 0 6 666,181,202,196,301,427, 0,679,860,1086,1439,1768, +,+,+,+,+,+, 717898 Simple_repeat Simple_repeat 585 chrUn_NT_473839v1 4223 4721 (TTAGGG)n 538 + 4223 4721 0 2 282,196, 0,302, +,+, 717901 Simple_repeat Simple_repeat 585 chrUn_NT_473839v1 4810 5192 (TTAGGG)n 611 + 4810 5192 0 2 183,175, 0,207, +,+, 717903 Simple_repeat Simple_repeat 585 chrUn_NT_473840v1 3100 4193 GGXHOI 368 - 3100 4193 0 4 128,132,495,246, 0,143,335,847, -,-,-,-, 717905 Satellite W-chromosome 585 chrUn_NT_473841v1 705 1104 (CCCTAA)n 515 + 705 1104 0 2 183,216, 0,183, +,+, 717909 Simple_repeat Simple_repeat 585 chrUn_NT_473841v1 1427 2003 (CCCTAA)n 697 + 1427 2003 0 3 181,178,175, 0,192,401, +,+,+, 717913 Simple_repeat Simple_repeat 585 chrUn_NT_473841v1 2269 2763 (CCCTAG)n 348 + 2269 2763 0 2 229,85, 0,409, +,+, 717916 Simple_repeat Simple_repeat 585 chrUn_NT_473841v1 2498 2885 (CCCTAA)n 626 + 2498 2885 0 2 180,207, 0,180, +,+, 717917 Simple_repeat Simple_repeat 585 chrUn_NT_473841v1 3007 3826 (CCCTAA)n 611 + 3007 3826 0 3 245,126,277, 0,416,542, +,+,+, 717919 Simple_repeat Simple_repeat 585 chrUn_NT_473841v1 3923 4972 (CCCTAA)n 558 + 3923 4972 0 3 266,12,468, 0,406,581, +,+,+, 717922 Simple_repeat Simple_repeat 585 chrUn_NT_473846v1 141 4086 CR1-F 523 + 141 4086 0 11 193,199,203,203,204,155,198,181,154,197,203, 0,465,961,1206,1451,1920,2365,2840,3065,3500,3742, +,+,+,+,+,+,+,+,+,+,+, 717954 LINE CR1 585 chrUn_NT_473846v1 4129 5224 CR1-F 483 + 4129 5224 0 4 203,203,203,138, 0,245,490,957, +,+,+,+, 717961 LINE CR1 585 chrUn_NT_473847v1 2708 3829 CR1-B2 704 + 2708 3829 0 2 225,893, 0,228, +,+, 717964 LINE CR1 585 chrUn_NT_473848v1 625 2001 GGXHOI 311 + 625 2001 0 2 998,354, 0,1022, +,+, 717969 Satellite W-chromosome 585 chrUn_NT_473848v1 2158 2832 GGXHOI 334 + 2158 2832 0 2 424,229, 0,445, +,+, 717970 Satellite W-chromosome 585 chrUn_NT_473848v1 4118 5221 GGXHOI 339 + 4118 5221 0 2 951,136, 0,967, +,+, 717972 Satellite W-chromosome 585 chrUn_NT_473849v1 579 1392 GGXHOI 373 - 579 1392 0 3 166,215,407, 0,177,406, -,-,-, 717974 Satellite W-chromosome 585 chrUn_NT_473849v1 2516 4611 GGXHOI 383 - 2516 4611 0 6 404,174,951,139,140,140, 0,455,643,1629,1800,1955, -,-,-,-,-,-, 717977 Satellite W-chromosome 585 chrUn_NT_473849v1 4732 5134 GGXHOI 354 - 4732 5134 0 2 127,259, 0,143, -,-, 717978 Satellite W-chromosome 585 chrUn_NT_473851v1 2003 2506 GGXHOI 399 - 2003 2506 0 2 304,184, 0,319, -,-, 717982 Satellite W-chromosome 585 chrUn_NT_473851v1 2577 5214 GGXHOI 356 - 2577 5214 0 2 1387,1229, 0,1408, -,-, 717983 Satellite W-chromosome 585 chrUn_NT_473853v1 1499 1783 CR1-X2 410 + 1499 1783 0 2 61,221, 0,63, +,+, 717987 LINE CR1 585 chrUn_NT_473854v1 1857 2938 GGXHOI 351 + 1857 2938 0 3 284,218,516, 0,320,565, +,+,+, 717991 Satellite W-chromosome 585 chrUn_NT_473854v1 3018 3755 GGXHOI 346 + 3018 3755 0 2 597,118, 0,619, +,+, 717992 Satellite W-chromosome 585 chrUn_NT_473854v1 4535 5172 GGXHOI 429 + 4535 5172 0 3 176,175,225, 0,192,412, +,+,+, 717994 Satellite W-chromosome 585 chrUn_NT_473855v1 3078 3532 CR1-H 671 + 3078 3532 0 2 296,158, 0,296, +,+, 717996 LINE CR1 585 chrUn_NT_473857v1 545 1410 (CCTTG)n 623 + 545 1410 0 3 185,403,263, 0,190,602, +,+,+, 718011 Simple_repeat Simple_repeat 585 chrUn_NT_473857v1 1661 2492 (CCTTG)n 514 + 1661 2492 0 4 165,200,223,197, 0,165,411,634, +,+,+,+, 718014 Simple_repeat Simple_repeat 585 chrUn_NT_473857v1 2556 2933 (CCTTG)n 600 + 2556 2933 0 2 181,181, 0,196, +,+, 718016 Simple_repeat Simple_repeat 585 chrUn_NT_473857v1 3026 3512 (CCTTG)n 590 + 3026 3512 0 2 102,17, 0,469, +,+, 718018 Simple_repeat Simple_repeat 585 chrUn_NT_473857v1 3128 3495 (GCCTG)n 490 + 3128 3495 0 2 158,34, 0,333, +,+, 718019 Simple_repeat Simple_repeat 585 chrUn_NT_473857v1 4253 5209 (CCTTG)n 576 + 4253 5209 0 4 122,47,227,293, 0,300,406,663, +,+,+,+, 718024 Simple_repeat Simple_repeat 585 chrUn_NT_473862v1 1236 1501 (CTCTATGGGG)n 264 - 1236 1501 0 2 122,32, 0,233, -,-, 718099 Satellite Satellite 585 chrUn_NT_473862v1 1517 2037 (CTCTATGGGG)n 370 + 1517 2037 0 2 379,128, 0,392, +,+, 718101 Satellite Satellite 585 chrUn_NT_473862v1 4795 4970 (CAGTG)n 258 + 4795 4970 0 2 7,42, 0,133, +,+, 718111 Simple_repeat Simple_repeat 585 chrUn_NT_473863v1 4255 4672 (GGATG)n 575 + 4255 4672 0 2 192,194, 0,223, +,+, 718122 Simple_repeat Simple_repeat 585 chrUn_NT_473865v1 1846 3512 (CGAGG)n 497 + 1846 3512 0 3 341,945,302, 0,359,1364, +,+,+, 718129 Simple_repeat Simple_repeat 585 chrUn_NT_473865v1 3562 4679 (CGAGG)n 407 + 3562 4679 0 2 915,183, 0,934, +,+, 718131 Simple_repeat Simple_repeat 585 chrUn_NT_473865v1 4781 5180 (CGAGG)n 567 + 4781 5180 0 2 179,177, 0,222, +,+, 718133 Simple_repeat Simple_repeat 585 chrUn_NT_473866v1 1947 2877 Sat-CR1_GG 132 + 1947 2877 0 2 186,86, 0,844, +,+, 718138 Satellite Satellite 585 chrUn_NT_473866v1 2832 4025 GGXHOI 464 + 2832 4025 0 2 564,381, 0,812, +,+, 718140 Satellite W-chromosome 585 chrUn_NT_473866v1 4110 5199 GGXHOI 426 + 4110 5199 0 2 101,596, 0,493, +,+, 718142 Satellite W-chromosome 585 chrUn_NT_473867v1 1557 3398 GGXHOI 403 - 1557 3398 0 2 808,1017, 0,824, -,-, 718147 Satellite W-chromosome 585 chrUn_NT_473867v1 3478 5204 GGXHOI 418 - 3478 5204 0 2 1347,363, 0,1363, -,-, 718148 Satellite W-chromosome 585 chrUn_NT_473868v1 3073 5149 GGXHOI 335 - 3073 5149 0 3 1110,771,135, 0,1139,1941, -,-,-, 718151 Satellite W-chromosome 585 chrUn_NT_473869v1 184 496 (ACCCCATAGGG)n 504 - 184 496 0 2 134,42, 0,270, -,-, 718153 Satellite Satellite 585 chrUn_NT_473869v1 576 869 (ACCCCATAGGG)n 488 - 576 869 0 2 125,135, 0,158, -,-, 718155 Satellite Satellite 585 chrUn_NT_473869v1 1638 1941 (ACCCCATAGGG)n 522 - 1638 1941 0 2 129,139, 0,164, -,-, 718160 Satellite Satellite 585 chrUn_NT_473869v1 2017 2318 (ACCCCATAGGG)n 495 - 2017 2318 0 2 130,154, 0,147, -,-, 718161 Satellite Satellite 585 chrUn_NT_473869v1 2394 2696 (ACCCCATAGGG)n 491 - 2394 2696 0 2 129,165, 0,137, -,-, 718162 Satellite Satellite 585 chrUn_NT_473869v1 2775 3078 (ACCCCATAGGG)n 488 - 2775 3078 0 2 131,137, 0,166, -,-, 718163 Satellite Satellite 585 chrUn_NT_473869v1 3153 3455 (ACCCCATAGGG)n 506 - 3153 3455 0 2 129,173, 0,129, -,-, 718164 Satellite Satellite 585 chrUn_NT_473869v1 3531 3811 (ACCCCATAGGG)n 488 - 3531 3811 0 2 116,24, 0,256, -,-, 718165 Satellite Satellite 585 chrUn_NT_473869v1 3910 4209 (ACCCCATAGGG)n 486 - 3910 4209 0 2 129,158, 0,141, -,-, 718167 Satellite Satellite 585 chrUn_NT_473870v1 3072 5203 GGXHOI 361 - 3072 5203 0 2 1743,367, 0,1764, -,-, 718175 Satellite W-chromosome 585 chrUn_NT_473871v1 3607 5200 GGXHOI 444 + 3607 5200 0 2 414,1163, 0,430, +,+, 718178 Satellite W-chromosome 585 chrUn_NT_473872v1 2632 2901 (ACCCCATAGGG)n 320 + 2632 2901 0 2 113,113, 0,156, +,+, 718180 Satellite Satellite 585 chrUn_NT_473873v1 1460 5194 GGXHOI 343 - 1460 5194 0 5 246,122,1210,130,1880, 0,267,415,1680,1854, -,-,-,-,-, 718182 Satellite W-chromosome 585 chrUn_NT_473874v1 2262 2397 (GCCATGTAAT)n 774 + 2262 2397 0 2 44,53, 0,82, +,+, 718194 Simple_repeat Simple_repeat 585 chrUn_NT_473874v1 2407 2888 (CAATG)n 374 + 2407 2888 0 2 170,45, 0,436, +,+, 718195 Simple_repeat Simple_repeat 585 chrUn_NT_473874v1 3246 3574 (CAGTG)n 166 + 3246 3574 0 2 101,111, 0,217, +,+, 718201 Simple_repeat Simple_repeat 585 chrUn_NT_473874v1 3596 3923 (CAGTG)n 208 + 3596 3923 0 2 119,32, 0,295, +,+, 718204 Simple_repeat Simple_repeat 585 chrUn_NT_473877v1 860 1387 Sat-CR1_GG 158 - 860 1387 0 2 123,163, 0,364, -,-, 718235 Satellite Satellite 585 chrUn_NT_473877v1 2171 2525 Sat-CR1_GG 180 + 2171 2525 0 2 69,123, 0,231, +,+, 718239 Satellite Satellite 585 chrUn_NT_473877v1 3687 4215 Sat-CR1_GG 158 - 3687 4215 0 2 121,164, 0,364, -,-, 718244 Satellite Satellite 585 chrUn_NT_473878v1 1236 4378 GGXHOI 398 - 1236 4378 0 2 2805,315, 0,2827, -,-, 718252 Satellite W-chromosome 585 chrUn_NT_473885v1 3657 4742 CR1-B2 638 - 3657 4742 0 2 863,219, 0,866, -,-, 718299 LINE CR1 585 chrUn_NT_473889v1 3611 5107 GGXHOI 428 - 3611 5107 0 2 1003,482, 0,1014, -,-, 718309 Satellite W-chromosome 585 chrUn_NT_473895v1 696 2865 GGXHOI 363 - 696 2865 0 2 819,1327, 0,842, -,-, 718327 Satellite W-chromosome 585 chrUn_NT_473895v1 4153 5181 GGXHOI 356 - 4153 5181 0 3 266,377,345, 0,283,683, -,-,-, 718329 Satellite W-chromosome 585 chrUn_NT_473897v1 641 2023 GGXHOI 348 - 641 2023 0 3 529,437,358, 0,573,1024, -,-,-, 718332 Satellite W-chromosome 585 chrUn_NT_473897v1 2236 3847 GGXHOI 350 - 2236 3847 0 3 222,734,598, 0,242,1013, -,-,-, 718333 Satellite W-chromosome 585 chrUn_NT_473897v1 3915 5111 GGXHOI 357 - 3915 5111 0 2 305,850, 0,346, -,-, 718334 Satellite W-chromosome 585 chrUn_NT_473899v1 1666 4636 GGXHOI 411 - 1666 4636 0 12 134,294,280,150,212,335,101,432,260,128,187,172, 0,147,490,786,966,1191,1555,1699,2142,2417,2572,2798, -,-,-,-,-,-,-,-,-,-,-,-, 718338 Satellite W-chromosome 585 chrUn_NT_473899v1 4722 5180 GGXHOI 295 - 4722 5180 0 3 134,158,124, 0,149,334, -,-,-, 718339 Satellite W-chromosome 585 chrUn_NT_473902v1 1904 5160 GGXHOI 361 - 1904 5160 0 5 657,949,179,624,730, 0,681,1643,1844,2526, -,-,-,-,-, 718345 Satellite W-chromosome 585 chrUn_NT_473905v1 2029 2175 (ACCCATTGGG)n 388 - 2029 2175 0 2 36,46, 0,100, -,-, 718374 Satellite Satellite 585 chrUn_NT_473905v1 2472 2661 (CCCCATTGGG)n 448 - 2472 2661 0 2 94,49, 0,140, -,-, 718377 Satellite Satellite 585 chrUn_NT_473905v1 2984 3143 (CCCCATTGGG)n 356 - 2984 3143 0 2 44,67, 0,92, -,-, 718380 Satellite Satellite 585 chrUn_NT_473906v1 1989 3550 GGXHOI 399 - 1989 3550 0 3 596,340,566, 0,641,995, -,-,-, 718394 Satellite W-chromosome 585 chrUn_NT_473906v1 3651 5110 GGXHOI 366 - 3651 5110 0 2 344,1097, 0,362, -,-, 718395 Satellite W-chromosome 585 chrUn_NT_473907v1 4391 5163 GGXHOI 434 - 4391 5163 0 2 146,604, 0,168, -,-, 718398 Satellite W-chromosome 585 chrUn_NT_473910v1 1162 4345 GGXHOI 572 + 1162 4345 0 2 746,250, 0,2933, +,+, 718407 Satellite W-chromosome 585 chrUn_NT_473910v1 4410 5047 GGXHOI 422 + 4410 5047 0 2 157,462, 0,175, +,+, 718409 Satellite W-chromosome 585 chrUn_NT_473911v1 3551 3663 (C)n 685 + 3551 3663 0 2 32,22, 0,90, +,+, 718412 Simple_repeat Simple_repeat 585 chrUn_NT_473915v1 3560 5036 GGXHOI 331 + 3560 5036 0 3 90,1070,238, 0,132,1238, +,+,+, 718445 Satellite W-chromosome 585 chrUn_NT_473916v1 873 1307 (CTCTATGGGG)n 514 + 873 1307 0 3 108,132,130, 0,148,304, +,+,+, 718452 Satellite Satellite 585 chrUn_NT_473916v1 1665 2151 (CTCTATGGGG)n 507 + 1665 2151 0 2 345,127, 0,359, +,+, 718456 Satellite Satellite 585 chrUn_NT_473916v1 2228 2536 (CTCTATGGGG)n 567 - 2228 2536 0 2 154,154, 0,154, -,-, 718457 Satellite Satellite 585 chrUn_NT_473916v1 2557 2960 (CTCTATGGGG)n 639 + 2557 2960 0 2 248,115, 0,288, +,+, 718458 Satellite Satellite 585 chrUn_NT_473916v1 3327 3640 (CTCTATGGGG)n 505 - 3327 3640 0 2 180,133, 0,180, -,-, 718462 Satellite Satellite 585 chrUn_NT_473916v1 4198 4464 (CTCTATGGGG)n 628 + 4198 4464 0 2 122,122, 0,144, +,+, 718465 Satellite Satellite 585 chrUn_NT_473916v1 4544 4780 (CTCTATGGGG)n 571 + 4544 4780 0 2 119,105, 0,131, +,+, 718466 Satellite Satellite 585 chrUn_NT_473917v1 2769 3153 (CATTG)n 288 + 2769 3153 0 2 165,181, 0,203, +,+, 718475 Simple_repeat Simple_repeat 585 chrUn_NT_473918v1 2128 3276 CR1-F 808 + 2128 3276 0 2 338,291, 0,857, +,+, 718487 LINE CR1 585 chrUn_NT_473919v1 4236 5160 GGXHOI 376 - 4236 5160 0 2 577,332, 0,592, -,-, 718491 Satellite W-chromosome 585 chrUn_NT_473923v1 2951 3524 GGXHOI 366 - 2951 3524 0 2 394,133, 0,440, -,-, 718523 Satellite W-chromosome 585 chrUn_NT_473923v1 3695 5154 GGXHOI 437 - 3695 5154 0 4 261,415,125,562, 0,301,758,897, -,-,-,-, 718524 Satellite W-chromosome 585 chrUn_NT_473925v1 52 691 (CAAGG)n 530 + 52 691 0 2 135,490, 0,149, +,+, 718530 Simple_repeat Simple_repeat 585 chrUn_NT_473925v1 754 2637 (CAAGG)n 630 + 754 2637 0 6 181,195,22,10,410,448, 0,212,624,825,1013,1435, +,+,+,+,+,+, 718532 Simple_repeat Simple_repeat 585 chrUn_NT_473925v1 3006 3590 (CAAGG)n 587 + 3006 3590 0 3 177,176,188, 0,204,396, +,+,+, 718540 Simple_repeat Simple_repeat 585 chrUn_NT_473925v1 3608 4928 (CAAGG)n 634 + 3608 4928 0 4 353,219,157,371, 0,376,768,949, +,+,+,+, 718542 Simple_repeat Simple_repeat 585 chrUn_NT_473928v1 641 4031 GGXHOI 403 - 641 4031 0 7 687,672,164,590,243,252,593, 0,739,1470,1671,2276,2530,2797, -,-,-,-,-,-,-, 718555 Satellite W-chromosome 585 chrUn_NT_473928v1 4148 5053 GGXHOI 398 - 4148 5053 0 2 255,638, 0,267, -,-, 718556 Satellite W-chromosome 585 chrUn_NT_473931v1 198 575 (CCTTG)n 741 + 198 575 0 2 181,171, 0,206, +,+, 718564 Simple_repeat Simple_repeat 585 chrUn_NT_473931v1 619 1044 (CCTTG)n 702 + 619 1044 0 2 181,235, 0,190, +,+, 718566 Simple_repeat Simple_repeat 585 chrUn_NT_473931v1 1381 3347 (CCTTG)n 598 + 1381 3347 0 6 105,99,484,216,184,426, 0,290,443,1115,1356,1540, +,+,+,+,+,+, 718570 Simple_repeat Simple_repeat 585 chrUn_NT_473931v1 3651 5139 (CCTTG)n 633 + 3651 5139 0 6 453,177,29,71,207,200, 0,453,805,1010,1081,1288, +,+,+,+,+,+, 718576 Simple_repeat Simple_repeat 585 chrUn_NT_473936v1 2797 3359 (TTAGGG)n 463 + 2797 3359 0 2 362,170, 0,392, +,+, 718623 Simple_repeat Simple_repeat 585 chrUn_NT_473936v1 4063 5137 GGXHOI 346 - 4063 5137 0 2 497,533, 0,541, -,-, 718626 Satellite W-chromosome 585 chrUn_NT_473937v1 2218 2942 GGXHOI 363 - 2218 2942 0 2 346,367, 0,357, -,-, 718628 Satellite W-chromosome 585 chrUn_NT_473937v1 3027 5131 GGXHOI 379 - 3027 5131 0 3 376,1349,342, 0,394,1762, -,-,-, 718629 Satellite W-chromosome 585 chrUn_NT_473938v1 2853 3006 (GTTGTTTCC)n 942 + 2853 3006 0 2 59,49, 0,104, +,+, 718637 Simple_repeat Simple_repeat 585 chrUn_NT_473938v1 3810 3957 (GTTCTTTCC)n 900 + 3810 3957 0 2 38,58, 0,89, +,+, 718641 Simple_repeat Simple_repeat 585 chrUn_NT_473939v1 1857 4376 GGXHOI 431 + 1857 4376 0 5 1128,563,354,225,134, 0,1189,1774,2144,2385, +,+,+,+,+, 718648 Satellite W-chromosome 585 chrUn_NT_473941v1 1645 1835 (CCCCATATCA)n 860 + 1645 1835 0 2 108,46, 0,144, +,+, 718656 Simple_repeat Simple_repeat 585 chrUn_NT_473941v1 4362 5151 (CCA)n 689 + 4362 5151 0 2 536,253, 0,536, +,+, 718658 Simple_repeat Simple_repeat 585 chrUn_NT_473943v1 634 3601 GGXHOI 386 - 634 3601 0 4 296,171,268,2150, 0,311,530,817, -,-,-,-, 718661 Satellite W-chromosome 585 chrUn_NT_473946v1 1099 2981 (TTAGGG)n 560 + 1099 2981 0 6 580,253,204,190,181,386, 0,593,863,1084,1304,1496, +,+,+,+,+,+, 718678 Simple_repeat Simple_repeat 585 chrUn_NT_473946v1 3035 5141 (TTAGGG)n 564 + 3035 5141 0 7 544,72,189,181,413,347,197, 0,555,638,838,1068,1511,1909, +,+,+,+,+,+,+, 718680 Simple_repeat Simple_repeat 585 chrUn_NT_473949v1 3598 3873 CR1-X2 347 + 3598 3873 0 2 61,214, 0,61, +,+, 718700 LINE CR1 585 chrUn_NT_473950v1 671 3433 GGXHOI 513 + 671 3433 0 4 208,154,1184,494, 0,245,828,2268, +,+,+,+, 718702 Satellite W-chromosome 585 chrUn_NT_473950v1 3499 5121 GGXHOI 562 + 3499 5121 0 2 911,440, 0,1182, +,+, 718705 Satellite W-chromosome 585 chrUn_NT_473951v1 3881 4952 GGXHOI 552 - 3881 4952 0 3 187,59,207, 0,468,864, -,-,-, 718712 Satellite W-chromosome 585 chrUn_NT_473952v1 1249 2146 GGXHOI 358 + 1249 2146 0 2 598,257, 0,640, +,+, 718717 Satellite W-chromosome 585 chrUn_NT_473953v1 1366 5135 GGXHOI 358 - 1366 5135 0 7 998,353,596,772,583,161,115, 0,1014,1421,2073,2861,3481,3654, -,-,-,-,-,-,-, 718724 Satellite W-chromosome 585 chrUn_NT_473955v1 776 5135 GGERVL-A-int 839 - 776 5135 0 3 726,3080,511, 0,768,3848, -,-,-, 718738 LTR ERVL 585 chrUn_NT_473956v1 820 1185 (TTAGGG)n 652 + 820 1185 0 2 130,102, 0,263, +,+, 718740 Simple_repeat Simple_repeat 585 chrUn_NT_473956v1 1667 5121 (TTAGGG)n 643 + 1667 5121 0 10 207,236,391,217,262,302,50,506,348,82, 0,387,670,1101,1318,1615,2108,2164,2670,3372, +,+,+,+,+,+,+,+,+,+, 718745 Simple_repeat Simple_repeat 585 chrUn_NT_473957v1 1244 1802 (CGAGG)n 541 + 1244 1802 0 2 180,352, 0,206, +,+, 718753 Simple_repeat Simple_repeat 585 chrUn_NT_473957v1 2590 3144 (CGAGG)n 513 + 2590 3144 0 3 160,182,178, 0,172,376, +,+,+, 718759 Simple_repeat Simple_repeat 585 chrUn_NT_473957v1 3739 4791 (CGAGG)n 471 + 3739 4791 0 4 192,354,238,8, 0,231,624,1044, +,+,+,+, 718763 Simple_repeat Simple_repeat 585 chrUn_NT_473958v1 2496 2953 CR1-H 677 - 2496 2953 0 2 163,294, 0,163, -,-, 718771 LINE CR1 585 chrUn_NT_473959v1 3930 4147 A-rich 278 + 3930 4147 0 2 59,98, 0,119, +,+, 718787 Low_complexity Low_complexity 585 chrUn_NT_473961v1 662 3726 GGXHOI 414 - 662 3726 0 3 1826,1056,144, 0,1844,2920, -,-,-, 718799 Satellite W-chromosome 585 chrUn_NT_473963v1 76 1497 GGXHOI 578 + 76 1497 0 3 569,194,17, 0,889,1404, +,+,+, 718810 Satellite W-chromosome 585 chrUn_NT_473963v1 2198 3017 GGXHOI 542 + 2198 3017 0 3 210,209,57, 0,280,762, +,+,+, 718815 Satellite W-chromosome 585 chrUn_NT_473963v1 3441 5124 GGXHOI 546 + 3441 5124 0 5 206,194,103,26,213, 0,680,933,1416,1470, +,+,+,+,+, 718818 Satellite W-chromosome 585 chrUn_NT_473964v1 431 1026 (CCTTG)n 518 + 431 1026 0 2 226,352, 0,243, +,+, 718824 Simple_repeat Simple_repeat 585 chrUn_NT_473964v1 1662 1931 (CAAGG)n 654 + 1662 1931 0 2 46,223, 0,46, +,+, 718829 Simple_repeat Simple_repeat 585 chrUn_NT_473964v1 2454 3186 (CAAGG)n 487 + 2454 3186 0 3 185,206,330, 0,185,402, +,+,+, 718834 Simple_repeat Simple_repeat 585 chrUn_NT_473964v1 3340 4248 (CCTTG)n 507 + 3340 4248 0 3 472,75,165, 0,651,743, +,+,+, 718835 Simple_repeat Simple_repeat 585 chrUn_NT_473965v1 2534 5021 GGERVL-C-int 836 - 2534 5021 0 2 508,1979, 0,508, -,-, 718840 LTR ERVL 585 chrUn_NT_473967v1 516 3002 GGXHOI 416 - 516 3002 0 6 139,1168,401,171,300,153, 0,180,1362,1779,2005,2333, -,-,-,-,-,-, 718847 Satellite W-chromosome 585 chrUn_NT_473970v1 2361 3215 GGXHOI 373 + 2361 3215 0 2 555,283, 0,571, +,+, 718866 Satellite W-chromosome 585 chrUn_NT_473970v1 3433 4955 GGXHOI 385 + 3433 4955 0 2 973,531, 0,991, +,+, 718867 Satellite W-chromosome 585 chrUn_NT_473971v1 1330 5119 GGXHOI 526 - 1330 5119 0 6 676,191,362,186,374,467, 0,999,1477,2162,2638,3322, -,-,-,-,-,-, 718872 Satellite W-chromosome 585 chrUn_NT_473973v1 4389 5100 GGXHOI 346 - 4389 5100 0 3 126,371,145, 0,140,566, -,-,-, 718879 Satellite W-chromosome 585 chrUn_NT_473975v1 547 1025 (CAGTG)n 226 + 547 1025 0 2 237,186, 0,292, +,+, 718886 Simple_repeat Simple_repeat 585 chrUn_NT_473976v1 1238 1732 GGXHOI 400 - 1238 1732 0 2 144,336, 0,158, -,-, 718895 Satellite W-chromosome 585 chrUn_NT_473976v1 2959 4285 GGXHOI 360 - 2959 4285 0 2 1007,302, 0,1024, -,-, 718897 Satellite W-chromosome 585 chrUn_NT_473978v1 410 3982 GGXHOI 424 - 410 3982 0 6 291,1824,131,913,148,145, 0,304,2148,2337,3263,3427, -,-,-,-,-,-, 718909 Satellite W-chromosome 585 chrUn_NT_473978v1 4097 4414 GGXHOI 396 - 4097 4414 0 2 146,134, 0,183, -,-, 718910 Satellite W-chromosome 585 chrUn_NT_473978v1 4525 4957 GGXHOI 461 - 4525 4957 0 2 265,152, 0,280, -,-, 718911 Satellite W-chromosome 585 chrUn_NT_473981v1 2141 5109 GGXHOI 377 - 2141 5109 0 6 194,136,119,703,680,1009, 0,205,353,517,1264,1959, -,-,-,-,-,-, 718928 Satellite W-chromosome 585 chrUn_NT_473983v1 872 1333 GGLTR5B 447 + 872 1333 0 2 139,255, 0,206, +,+, 718937 LTR ERVL 585 chrUn_NT_473988v1 1010 1307 CR1-Y4 560 + 1010 1307 0 2 66,60, 0,237, +,+, 718966 LINE CR1 585 chrUn_NT_473988v1 1362 1659 CR1-Y4 477 + 1362 1659 0 2 66,60, 0,237, +,+, 718968 LINE CR1 585 chrUn_NT_473988v1 4133 4562 CR1-Y4 560 + 4133 4562 0 2 66,60, 0,369, +,+, 718989 LINE CR1 585 chrUn_NT_473989v1 915 1049 (CACTC)n 92 + 915 1049 0 2 19,77, 0,57, +,+, 718995 Simple_repeat Simple_repeat 585 chrUn_NT_473993v1 3385 4222 (CTCTATGGGG)n 685 + 3385 4222 0 4 80,11,133,241, 0,203,417,596, +,+,+,+, 719034 Satellite Satellite 585 chrUn_NT_473993v1 4449 4754 (CTCTATGGGG)n 602 - 4449 4754 0 2 152,31, 0,274, -,-, 719040 Satellite Satellite 585 chrUn_NT_473994v1 2144 3521 GGXHOI 582 - 2144 3521 0 3 156,13,229, 0,511,1148, -,-,-, 719048 Satellite W-chromosome 585 chrUn_NT_473994v1 3668 4882 GGXHOI 546 - 3668 4882 0 4 11,13,141,55, 0,197,976,1159, -,-,-,-, 719051 Satellite W-chromosome 585 chrUn_NT_473995v1 4970 5053 (C)n 734 + 4970 5053 0 2 26,24, 0,59, +,+, 719062 Simple_repeat Simple_repeat 585 chrUn_NT_473996v1 1087 1458 (ACCCATAGAG)n 638 - 1087 1458 0 2 118,33, 0,338, -,-, 719070 Satellite Satellite 585 chrUn_NT_473999v1 3109 3762 GGXHOI 319 + 3109 3762 0 2 200,434, 0,219, +,+, 719086 Satellite W-chromosome 585 chrUn_NT_473999v1 4312 4604 GGXHOI 339 + 4312 4604 0 2 115,120, 0,172, +,+, 719087 Satellite W-chromosome 585 chrUn_NT_474005v1 926 1337 (CAGG)n 386 + 926 1337 0 2 201,184, 0,227, +,+, 719109 Simple_repeat Simple_repeat 585 chrUn_NT_474007v1 2850 3173 (GCCCCACAGCT)n 408 - 2850 3173 0 2 119,141, 0,182, -,-, 719128 Satellite Satellite 585 chrUn_NT_474009v1 2153 5081 GGXHOI 460 - 2153 5081 0 5 283,946,520,437,645, 0,334,1294,1829,2283, -,-,-,-,-, 719137 Satellite W-chromosome 585 chrUn_NT_474010v1 3363 3544 (ACCCATTGGG)n 224 - 3363 3544 0 2 70,59, 0,122, -,-, 719145 Satellite Satellite 585 chrUn_NT_474011v1 301 546 (ACCCCATAGGG)n 360 - 301 546 0 2 90,48, 0,197, -,-, 719153 Satellite Satellite 585 chrUn_NT_474011v1 833 1571 (ACCCCATAGGG)n 390 - 833 1571 0 4 159,106,111,233, 0,217,380,505, -,-,-,-, 719156 Satellite Satellite 585 chrUn_NT_474011v1 1598 1841 (ACCCCATAGGG)n 353 - 1598 1841 0 2 119,105, 0,138, -,-, 719158 Satellite Satellite 585 chrUn_NT_474011v1 3784 4921 (AAGTG)n 585 + 3784 4921 0 3 553,197,344, 0,569,793, +,+,+, 719160 Simple_repeat Simple_repeat 585 chrUn_NT_474012v1 3548 5057 GGXHOI 318 + 3548 5057 0 5 449,298,122,325,135, 0,501,816,986,1374, +,+,+,+,+, 719163 Satellite W-chromosome 585 chrUn_NT_474013v1 2276 4612 (TGGA)n 620 + 2276 4612 0 6 247,750,260,65,68,372, 0,280,1087,1631,1875,1964, +,+,+,+,+,+, 719169 Simple_repeat Simple_repeat 585 chrUn_NT_474014v1 816 1991 GGXHOI 521 + 816 1991 0 4 345,70,47,149, 0,657,771,1026, +,+,+,+, 719176 Satellite W-chromosome 585 chrUn_NT_474014v1 2903 4904 GGXHOI 513 + 2903 4904 0 3 472,363,844, 0,739,1157, +,+,+, 719181 Satellite W-chromosome 585 chrUn_NT_474021v1 2247 3527 GGLTR7-int 302 + 2247 3527 0 2 255,281, 0,999, +,+, 719219 LTR ERV1 585 chrUn_NT_474022v1 3466 5057 GGXHOI 374 - 3466 5057 0 4 244,841,217,234, 0,263,1119,1357, -,-,-,-, 719222 Satellite W-chromosome 585 chrUn_NT_474030v1 4610 4952 GGERVL-A-int 483 - 4610 4952 0 2 111,141, 0,201, -,-, 719257 LTR ERVL 585 chrUn_NT_474031v1 1543 3827 GGXHOI 386 - 1543 3827 0 3 288,1724,237, 0,299,2047, -,-,-, 719259 Satellite W-chromosome 585 chrUn_NT_474031v1 3951 5001 GGXHOI 362 - 3951 5001 0 2 271,759, 0,291, -,-, 719260 Satellite W-chromosome 585 chrUn_NT_474034v1 289 5057 GGXHOI 413 - 289 5057 0 4 107,1507,1285,1791, 0,145,1675,2977, -,-,-,-, 719270 Satellite W-chromosome 585 chrUn_NT_474036v1 394 5011 GGXHOI 508 + 394 5011 0 8 577,157,993,720,136,292,350,26, 0,595,944,2261,3002,3432,3973,4591, +,+,+,+,+,+,+,+, 719275 Satellite W-chromosome 585 chrUn_NT_474038v1 408 1179 GGXHOI 356 - 408 1179 0 2 472,282, 0,489, -,-, 719282 Satellite W-chromosome 585 chrUn_NT_474038v1 1274 2053 GGXHOI 346 - 1274 2053 0 3 155,222,330, 0,167,449, -,-,-, 719283 Satellite W-chromosome 585 chrUn_NT_474038v1 2268 4857 GGXHOI 400 - 2268 4857 0 5 798,404,265,746,245, 0,852,1294,1577,2344, -,-,-,-,-, 719284 Satellite W-chromosome 585 chrUn_NT_474039v1 648 1450 (ACCCATAGAG)n 717 + 648 1450 0 3 282,126,338, 0,333,464, +,+,+, 719286 Satellite Satellite 585 chrUn_NT_474039v1 4384 4888 (ACCCCATAGGG)n 404 - 4384 4888 0 2 32,429, 0,75, -,-, 719294 Satellite Satellite 585 chrUn_NT_474040v1 2469 3775 GGXHOI 344 + 2469 3775 0 3 95,151,563, 0,579,743, +,+,+, 719298 Satellite W-chromosome 585 chrUn_NT_474040v1 3994 5050 GGXHOI 300 + 3994 5050 0 2 722,291, 0,765, +,+, 719301 Satellite W-chromosome 585 chrUn_NT_474041v1 3888 4590 CR1-C4 231 + 3888 4590 0 2 294,328, 0,374, +,+, 719303 LINE CR1 585 chrUn_NT_474043v1 2233 2362 G-rich 559 + 2233 2362 0 2 34,37, 0,92, +,+, 719308 Low_complexity Low_complexity 585 chrUn_NT_474046v1 3516 5030 GGXHOI 387 + 3516 5030 0 4 484,474,189,265, 0,504,1009,1249, +,+,+,+, 719329 Satellite W-chromosome 585 chrUn_NT_474052v1 2096 2233 GA-rich 232 + 2096 2233 0 2 42,61, 0,76, +,+, 719356 Low_complexity Low_complexity 585 chrUn_NT_474052v1 3645 3788 GA-rich 278 + 3645 3788 0 2 43,43, 0,100, +,+, 719358 Low_complexity Low_complexity 585 chrUn_NT_474053v1 2004 2310 (CTCTATGGGG)n 302 - 2004 2310 0 2 116,38, 0,268, -,-, 719362 Satellite Satellite 585 chrUn_NT_474061v1 850 2074 GGXHOI 333 - 850 2074 0 2 214,950, 0,274, -,-, 719385 Satellite W-chromosome 585 chrUn_NT_474061v1 2206 3236 GGXHOI 331 - 2206 3236 0 2 546,428, 0,602, -,-, 719386 Satellite W-chromosome 585 chrUn_NT_474061v1 3341 4973 GGXHOI 313 - 3341 4973 0 3 949,265,347, 0,999,1285, -,-,-, 719387 Satellite W-chromosome 585 chrUn_NT_474062v1 700 1749 GGXHOI 396 - 700 1749 0 3 300,438,277, 0,318,772, -,-,-, 719389 Satellite W-chromosome 585 chrUn_NT_474062v1 2172 3515 GGXHOI 281 - 2172 3515 0 3 1058,129,122, 0,1071,1221, -,-,-, 719391 Satellite W-chromosome 585 chrUn_NT_474062v1 3997 4996 GGXHOI 352 - 3997 4996 0 5 164,121,135,136,299, 0,215,350,526,700, -,-,-,-,-, 719393 Satellite W-chromosome 585 chrUn_NT_474065v1 3103 4127 GGXHOI 395 - 3103 4127 0 3 676,153,135, 0,693,889, -,-,-, 719418 Satellite W-chromosome 585 chrUn_NT_474067v1 1316 5077 A-rich 342 + 1316 5077 0 2 2051,1676, 0,2085, +,+, 719424 Low_complexity Low_complexity 585 chrUn_NT_474068v1 2040 3075 GGXHOI 359 + 2040 3075 0 3 389,261,293, 0,450,742, +,+,+, 719427 Satellite W-chromosome 585 chrUn_NT_474068v1 3181 4190 GGXHOI 332 + 3181 4190 0 2 434,552, 0,457, +,+, 719428 Satellite W-chromosome 585 chrUn_NT_474071v1 939 1811 (TTAGGG)n 525 + 939 1811 0 3 350,274,184, 0,361,688, +,+,+, 719453 Simple_repeat Simple_repeat 585 chrUn_NT_474071v1 1925 2333 GGLTR7A 651 + 1925 2333 0 2 77,331, 0,77, +,+, 719455 LTR ERV1 585 chrUn_NT_474071v1 3718 4338 GGXHOI 295 + 3718 4338 0 2 399,172, 0,448, +,+, 719465 Satellite W-chromosome 585 chrUn_NT_474073v1 725 2560 GGXHOI 320 + 725 2560 0 5 125,372,573,124,572, 0,144,532,1125,1263, +,+,+,+,+, 719473 Satellite W-chromosome 585 chrUn_NT_474073v1 2982 3996 GGXHOI 356 + 2982 3996 0 3 159,208,593, 0,176,421, +,+,+, 719475 Satellite W-chromosome 585 chrUn_NT_474073v1 4073 4944 GGXHOI 308 + 4073 4944 0 3 162,195,449, 0,208,422, +,+,+, 719476 Satellite W-chromosome 585 chrUn_NT_474074v1 136 1120 (ACCCCATAGGG)n 556 - 136 1120 0 2 558,296, 0,688, -,-, 719478 Satellite Satellite 585 chrUn_NT_474074v1 3671 4950 (ACCCCATAGGG)n 502 + 3671 4950 0 7 91,33,91,123,82,161,23, 0,209,266,471,820,924,1256, +,+,+,+,+,+,+, 719485 Satellite Satellite 585 chrUn_NT_474077v1 1685 5004 GGXHOI 371 - 1685 5004 0 8 279,458,159,272,174,108,1563,163, 0,291,789,960,1249,1454,1576,3156, -,-,-,-,-,-,-,-, 719496 Satellite W-chromosome 585 chrUn_NT_474080v1 774 3011 GGXHOI 390 + 774 3011 0 2 1581,614, 0,1623, +,+, 719523 Satellite W-chromosome 585 chrUn_NT_474084v1 1899 3551 GGXHOI 366 - 1899 3551 0 2 399,1196, 0,456, -,-, 719534 Satellite W-chromosome 585 chrUn_NT_474086v1 302 614 CR1-Y2 476 + 302 614 0 2 217,66, 0,246, +,+, 719546 LINE CR1 585 chrUn_NT_474086v1 710 927 CR1-Y2 532 + 710 927 0 2 114,103, 0,114, +,+, 719549 LINE CR1 585 chrUn_NT_474086v1 955 1187 CR1-Y2 431 + 955 1187 0 2 106,126, 0,106, +,+, 719551 LINE CR1 585 chrUn_NT_474086v1 1259 1469 CR1-Y2 523 + 1259 1469 0 3 89,63,58, 0,89,152, +,+,+, 719554 LINE CR1 585 chrUn_NT_474086v1 1534 1654 CR1-Y2 667 + 1534 1654 0 2 52,65, 0,55, +,+, 719556 LINE CR1 585 chrUn_NT_474086v1 1975 2458 CR1-Y2 392 + 1975 2458 0 2 85,77, 0,406, +,+, 719561 LINE CR1 585 chrUn_NT_474086v1 3525 3629 CR1-C4 647 - 3525 3629 0 2 53,51, 0,53, -,-, 719572 LINE CR1 585 chrUn_NT_474089v1 974 1747 GGXHOI 361 + 974 1747 0 3 324,219,203, 0,335,570, +,+,+, 719584 Satellite W-chromosome 585 chrUn_NT_474089v1 1917 2959 GGXHOI 369 + 1917 2959 0 2 224,801, 0,241, +,+, 719585 Satellite W-chromosome 585 chrUn_NT_474091v1 381 1184 GGXHOI 326 - 381 1184 0 2 314,452, 0,351, -,-, 719610 Satellite W-chromosome 585 chrUn_NT_474095v1 1872 3361 GGXHOI 361 + 1872 3361 0 2 470,956, 0,533, +,+, 719633 Satellite W-chromosome 585 chrUn_NT_474095v1 3517 5002 GGXHOI 378 - 3517 5002 0 2 513,910, 0,575, -,-, 719634 Satellite W-chromosome 585 chrUn_NT_474097v1 1005 1605 (CGAGG)n 553 + 1005 1605 0 2 175,362, 0,238, +,+, 719645 Simple_repeat Simple_repeat 585 chrUn_NT_474100v1 3363 3601 (GCCCCACAGCT)n 666 - 3363 3601 0 2 96,106, 0,132, -,-, 719672 Satellite Satellite 585 chrUn_NT_474102v1 2449 2549 (C)n 639 + 2449 2549 0 2 42,24, 0,76, +,+, 719681 Simple_repeat Simple_repeat 585 chrUn_NT_474103v1 3986 4996 GGXHOI 309 + 3986 4996 0 3 249,404,313, 0,273,697, +,+,+, 719689 Satellite W-chromosome 585 chrUn_NT_474108v1 595 3142 GGXHOI 387 - 595 3142 0 7 221,475,614,240,268,333,175, 0,266,778,1437,1727,2013,2372, -,-,-,-,-,-,-, 719715 Satellite W-chromosome 585 chrUn_NT_474108v1 3206 4301 GGXHOI 333 - 3206 4301 0 4 294,429,145,130, 0,309,757,965, -,-,-,-, 719716 Satellite W-chromosome 585 chrUn_NT_474108v1 4418 4994 GGXHOI 321 - 4418 4994 0 2 429,127, 0,449, -,-, 719717 Satellite W-chromosome 585 chrUn_NT_474112v1 2524 2990 (ACCCCATAGGG)n 413 + 2524 2990 0 3 115,132,120, 0,153,346, +,+,+, 719743 Satellite Satellite 585 chrUn_NT_474114v1 2873 3847 GGXHOI 348 - 2873 3847 0 3 357,415,167, 0,373,807, -,-,-, 719749 Satellite W-chromosome 585 chrUn_NT_474114v1 4228 4915 GGXHOI 399 - 4228 4915 0 2 219,445, 0,242, -,-, 719751 Satellite W-chromosome 585 chrUn_NT_474115v1 323 943 (TTAGGG)n 644 + 323 943 0 2 247,200, 0,420, +,+, 719754 Simple_repeat Simple_repeat 585 chrUn_NT_474115v1 2126 2782 (TTAGGG)n 618 + 2126 2782 0 2 463,181, 0,475, +,+, 719765 Simple_repeat Simple_repeat 585 chrUn_NT_474115v1 2860 4504 (TTAGGG)n 651 + 2860 4504 0 5 187,409,242,333,438, 0,187,596,838,1206, +,+,+,+,+, 719767 Simple_repeat Simple_repeat 585 chrUn_NT_474117v1 811 4923 GGXHOI 428 - 811 4923 0 4 1876,768,577,803, 0,1888,2717,3309, -,-,-,-, 719777 Satellite W-chromosome 585 chrUn_NT_474118v1 1801 4107 GGXHOI 364 - 1801 4107 0 6 675,121,345,136,332,601, 0,689,851,1207,1359,1705, -,-,-,-,-,-, 719779 Satellite W-chromosome 585 chrUn_NT_474118v1 4347 4972 GGXHOI 407 - 4347 4972 0 2 298,312, 0,313, -,-, 719780 Satellite W-chromosome 585 chrUn_NT_474119v1 3527 4975 GGXHOI 414 - 3527 4975 0 3 552,352,511, 0,567,937, -,-,-, 719784 Satellite W-chromosome 585 chrUn_NT_474121v1 741 1142 (ACCCATAGAG)n 586 + 741 1142 0 3 130,94,35, 0,165,366, +,+,+, 719787 Satellite Satellite 585 chrUn_NT_474121v1 1143 1624 (CTCTATGGGG)n 660 + 1143 1624 0 3 139,112,58, 0,139,423, +,+,+, 719789 Satellite Satellite 585 chrUn_NT_474121v1 2104 2598 (CTCTATGGGG)n 648 + 2104 2598 0 2 219,105, 0,389, +,+, 719792 Satellite Satellite 585 chrUn_NT_474122v1 4199 4969 GGXHOI 486 + 4199 4969 0 2 251,205, 0,565, +,+, 719816 Satellite W-chromosome 585 chrUn_NT_474128v1 1192 1809 CR1-H 381 + 1192 1809 0 2 208,373, 0,244, +,+, 719832 LINE CR1 585 chrUn_NT_474128v1 3270 3885 CR1-H 389 + 3270 3885 0 2 206,374, 0,241, +,+, 719835 LINE CR1 585 chrUn_NT_474130v1 895 2866 (CCCTAA)n 612 + 895 2866 0 6 442,372,182,449,201,193, 0,480,894,1094,1577,1778, +,+,+,+,+,+, 719847 Simple_repeat Simple_repeat 585 chrUn_NT_474130v1 2878 3778 (CCCTAA)n 639 + 2878 3778 0 3 365,301,44, 0,381,856, +,+,+, 719849 Simple_repeat Simple_repeat 585 chrUn_NT_474130v1 4201 4946 (CCCTAA)n 770 + 4201 4946 0 3 271,53,193, 0,478,552, +,+,+, 719853 Simple_repeat Simple_repeat 585 chrUn_NT_474131v1 669 1056 (TTAGGG)n 469 + 669 1056 0 2 182,193, 0,194, +,+, 719858 Simple_repeat Simple_repeat 585 chrUn_NT_474131v1 1073 1462 (TTAGGG)n 700 + 1073 1462 0 2 179,177, 0,212, +,+, 719860 Simple_repeat Simple_repeat 585 chrUn_NT_474131v1 1543 2294 (TTAGGG)n 640 + 1543 2294 0 2 357,360, 0,391, +,+, 719862 Simple_repeat Simple_repeat 585 chrUn_NT_474131v1 2381 3559 (TTAGGG)n 606 + 2381 3559 0 4 193,246,405,123, 0,193,470,1055, +,+,+,+, 719864 Simple_repeat Simple_repeat 585 chrUn_NT_474131v1 3637 4956 (TTAGGG)n 612 + 3637 4956 0 4 372,171,373,20, 0,570,747,1299, +,+,+,+, 719866 Simple_repeat Simple_repeat 585 chrUn_NT_474139v1 3459 4887 GGXHOI 377 - 3459 4887 0 3 385,102,908, 0,396,520, -,-,-, 719896 Satellite W-chromosome 585 chrUn_NT_474140v1 4141 4933 GGXHOI 361 + 4141 4933 0 2 300,472, 0,320, +,+, 719900 Satellite W-chromosome 585 chrUn_NT_474141v1 540 1697 (TTAGGG)n 591 + 540 1697 0 3 179,295,343, 0,191,814, +,+,+, 719904 Simple_repeat Simple_repeat 585 chrUn_NT_474141v1 1743 2259 (TTAGGG)n 666 + 1743 2259 0 2 247,90, 0,426, +,+, 719908 Simple_repeat Simple_repeat 585 chrUn_NT_474141v1 2552 3041 (TTAGGG)n 584 + 2552 3041 0 2 278,21, 0,468, +,+, 719911 Simple_repeat Simple_repeat 585 chrUn_NT_474141v1 3443 4692 (TTAGGG)n 643 + 3443 4692 0 4 328,94,185,442, 0,514,608,807, +,+,+,+, 719915 Simple_repeat Simple_repeat 585 chrUn_NT_474142v1 95 1246 (CGAGG)n 573 + 95 1246 0 3 242,90,606, 0,432,545, +,+,+, 719920 Simple_repeat Simple_repeat 585 chrUn_NT_474142v1 1279 3593 (CGAGG)n 587 + 1279 3593 0 7 275,130,350,14,64,284,210, 0,584,727,1358,1548,1634,2104, +,+,+,+,+,+,+, 719923 Simple_repeat Simple_repeat 585 chrUn_NT_474142v1 3653 4251 (CGAGG)n 606 + 3653 4251 0 2 211,369, 0,229, +,+, 719930 Simple_repeat Simple_repeat 585 chrUn_NT_474142v1 4364 4943 (CGAGG)n 612 + 4364 4943 0 2 369,210, 0,369, +,+, 719932 Simple_repeat Simple_repeat 585 chrUn_NT_474143v1 239 1779 (CCTCG)n 485 + 239 1779 0 7 289,12,119,195,56,224,81, 0,449,801,920,1128,1184,1459, +,+,+,+,+,+,+, 719936 Simple_repeat Simple_repeat 585 chrUn_NT_474143v1 2002 3145 (CCTCG)n 582 + 2002 3145 0 4 524,175,183,182, 0,555,762,961, +,+,+,+, 719943 Simple_repeat Simple_repeat 585 chrUn_NT_474143v1 3318 4309 (CCTCG)n 567 + 3318 4309 0 2 472,475, 0,516, +,+, 719945 Simple_repeat Simple_repeat 585 chrUn_NT_474149v1 2803 4942 GGXHOI 465 - 2803 4942 0 2 1355,769, 0,1370, -,-, 719973 Satellite W-chromosome 585 chrUn_NT_474153v1 4413 4819 GGXHOI 470 - 4413 4819 0 2 252,140, 0,266, -,-, 719989 Satellite W-chromosome 585 chrUn_NT_474154v1 1107 3313 (CCGT)n 116 + 1107 3313 0 2 81,2072, 0,134, +,+, 719991 Simple_repeat Simple_repeat 585 chrUn_NT_474156v1 2727 3778 GGXHOI 392 + 2727 3778 0 2 472,516, 0,535, +,+, 720005 Satellite W-chromosome 585 chrUn_NT_474156v1 3877 4904 GGXHOI 368 + 3877 4904 0 2 472,492, 0,535, +,+, 720006 Satellite W-chromosome 585 chrUn_NT_474157v1 1160 3392 GGXHOI 367 + 1160 3392 0 5 214,425,611,143,723, 0,236,683,1311,1509, +,+,+,+,+, 720008 Satellite W-chromosome 585 chrUn_NT_474158v1 1298 1856 (CCTCG)n 509 + 1298 1856 0 2 180,353, 0,205, +,+, 720017 Simple_repeat Simple_repeat 585 chrUn_NT_474158v1 2512 3487 (CCTCG)n 545 + 2512 3487 0 4 178,181,314,242, 0,205,403,733, +,+,+,+, 720023 Simple_repeat Simple_repeat 585 chrUn_NT_474164v1 4181 4813 GA-rich 292 + 4181 4813 0 2 298,265, 0,367, +,+, 720060 Low_complexity Low_complexity 585 chrUn_NT_474167v1 473 1730 GGXHOI 324 + 473 1730 0 3 550,459,216, 0,566,1041, +,+,+, 720070 Satellite W-chromosome 585 chrUn_NT_474167v1 1795 3221 GGXHOI 355 + 1795 3221 0 3 482,552,307, 0,506,1119, +,+,+, 720071 Satellite W-chromosome 585 chrUn_NT_474167v1 3685 4919 GGXHOI 373 + 3685 4919 0 5 530,99,203,140,112, 0,579,706,920,1122, +,+,+,+,+, 720073 Satellite W-chromosome 585 chrUn_NT_474173v1 3425 4897 GGXHOI 427 - 3425 4897 0 3 684,98,618, 0,695,854, -,-,-, 720109 Satellite W-chromosome 585 chrUn_NT_474175v1 1802 4179 GGLTR7-int 616 - 1802 4179 0 2 794,255, 0,2122, -,-, 720113 LTR ERV1 585 chrUn_NT_474176v1 1369 1891 GGXHOI 313 - 1369 1891 0 2 155,350, 0,172, -,-, 720118 Satellite W-chromosome 585 chrUn_NT_474176v1 1971 4929 GGXHOI 352 - 1971 4929 0 5 113,1071,127,878,646, 0,127,1254,1416,2312, -,-,-,-,-, 720119 Satellite W-chromosome 585 chrUn_NT_474177v1 1480 1696 (CCATCC)n 350 + 1480 1696 0 2 6,6, 0,210, +,+, 720123 Simple_repeat Simple_repeat 585 chrUn_NT_474177v1 2652 3589 (CCCTAA)n 573 + 2652 3589 0 3 307,381,206, 0,307,731, +,+,+, 720126 Simple_repeat Simple_repeat 585 chrUn_NT_474179v1 1655 3215 (GGAAGT)n 378 + 1655 3215 0 2 62,1470, 0,90, +,+, 720142 Simple_repeat Simple_repeat 585 chrUn_NT_474179v1 3215 4317 (AAGTG)n 587 + 3215 4317 0 4 206,199,195,400, 0,266,494,702, +,+,+,+, 720144 Simple_repeat Simple_repeat 585 chrUn_NT_474180v1 3664 3746 G-rich 675 + 3664 3746 0 2 27,28, 0,54, +,+, 720156 Low_complexity Low_complexity 585 chrUn_NT_474182v1 3425 4914 GGXHOI 387 - 3425 4914 0 3 728,249,449, 0,750,1040, -,-,-, 720172 Satellite W-chromosome 585 chrUn_NT_474186v1 1098 2622 GGXHOI 572 - 1098 2622 0 2 273,776, 0,748, -,-, 720183 Satellite W-chromosome 585 chrUn_NT_474186v1 2838 4917 GGXHOI 538 - 2838 4917 0 3 276,158,65, 0,1531,2014, -,-,-, 720187 Satellite W-chromosome 585 chrUn_NT_474187v1 4021 4633 CR1-H 665 + 4021 4633 0 2 471,135, 0,477, +,+, 720193 LINE CR1 585 chrUn_NT_474188v1 2445 4046 GGXHOI 303 - 2445 4046 0 4 407,277,151,695, 0,438,739,906, -,-,-,-, 720195 Satellite W-chromosome 585 chrUn_NT_474188v1 4217 4844 GGXHOI 376 - 4217 4844 0 3 190,178,175, 0,217,452, -,-,-, 720196 Satellite W-chromosome 585 chrUn_NT_474189v1 210 483 (CTCTATGGGG)n 481 + 210 483 0 2 116,118, 0,155, +,+, 720198 Satellite Satellite 585 chrUn_NT_474191v1 2089 4569 GGXHOI 358 - 2089 4569 0 5 159,997,409,329,465, 0,179,1191,1658,2015, -,-,-,-,-, 720206 Satellite W-chromosome 585 chrUn_NT_474195v1 4104 4566 GGLTR3F2 623 + 4104 4566 0 3 192,140,74, 0,222,388, +,+,+, 720222 LTR ERVL 585 chrUn_NT_474196v1 543 4385 GGXHOI 371 - 543 4385 0 7 1091,592,644,171,139,791,255, 0,1107,1713,2398,2583,2733,3587, -,-,-,-,-,-,-, 720227 Satellite W-chromosome 585 chrUn_NT_474196v1 4473 4917 GGXHOI 390 - 4473 4917 0 2 181,242, 0,202, -,-, 720228 Satellite W-chromosome 585 chrUn_NT_474200v1 2250 3363 (CGAGG)n 438 + 2250 3363 0 2 228,707, 0,406, +,+, 720248 Simple_repeat Simple_repeat 585 chrUn_NT_474200v1 3405 3600 (CGAGG)n 465 + 3405 3600 0 2 16,165, 0,30, +,+, 720251 Simple_repeat Simple_repeat 585 chrUn_NT_474201v1 520 3767 GGXHOI 350 - 520 3767 0 3 1345,1564,299, 0,1368,2948, -,-,-, 720256 Satellite W-chromosome 585 chrUn_NT_474203v1 1446 2497 GGXHOI 392 + 1446 2497 0 2 472,516, 0,535, +,+, 720261 Satellite W-chromosome 585 chrUn_NT_474203v1 2596 3647 GGXHOI 392 + 2596 3647 0 2 472,516, 0,535, +,+, 720262 Satellite W-chromosome 585 chrUn_NT_474205v1 2533 2892 (ACATG)n 309 + 2533 2892 0 2 165,165, 0,194, +,+, 720270 Simple_repeat Simple_repeat 585 chrUn_NT_474205v1 3077 3447 (ACATG)n 301 + 3077 3447 0 2 175,165, 0,205, +,+, 720271 Simple_repeat Simple_repeat 585 chrUn_NT_474207v1 1445 1853 (ACCCCATAGGG)n 522 + 1445 1853 0 2 238,114, 0,294, +,+, 720282 Satellite Satellite 585 chrUn_NT_474208v1 2834 3107 (ACCCATAGAG)n 385 - 2834 3107 0 2 110,103, 0,170, -,-, 720287 Satellite Satellite 585 chrUn_NT_474209v1 441 1288 (CAAGG)n 650 + 441 1288 0 2 389,125, 0,722, +,+, 720292 Simple_repeat Simple_repeat 585 chrUn_NT_474209v1 1345 1771 (CAAGG)n 604 + 1345 1771 0 2 189,237, 0,189, +,+, 720295 Simple_repeat Simple_repeat 585 chrUn_NT_474209v1 1896 2737 (CAAGG)n 632 + 1896 2737 0 3 108,15,436, 0,346,405, +,+,+, 720297 Simple_repeat Simple_repeat 585 chrUn_NT_474209v1 2763 4464 (CAAGG)n 595 + 2763 4464 0 5 405,238,238,42,190, 0,405,662,1469,1511, +,+,+,+,+, 720300 Simple_repeat Simple_repeat 585 chrUn_NT_474210v1 796 1894 CR1-B2 674 - 796 1894 0 2 894,198, 0,900, -,-, 720308 LINE CR1 585 chrUn_NT_474212v1 602 1258 GGXHOI 297 - 602 1258 0 2 99,498, 0,158, -,-, 720312 Satellite W-chromosome 585 chrUn_NT_474212v1 1888 2519 GGXHOI 339 - 1888 2519 0 2 272,345, 0,286, -,-, 720314 Satellite W-chromosome 585 chrUn_NT_474212v1 2622 4083 GGXHOI 325 - 2622 4083 0 4 409,346,177,429, 0,452,830,1032, -,-,-,-, 720315 Satellite W-chromosome 585 chrUn_NT_474213v1 766 1891 GGXHOI 582 + 766 1891 0 3 210,120,17, 0,668,1108, +,+,+, 720319 Satellite W-chromosome 585 chrUn_NT_474213v1 4472 4835 GGXHOI 336 + 4472 4835 0 2 148,162, 0,201, +,+, 720325 Satellite W-chromosome 585 chrUn_NT_474216v1 42 1817 (CGAGG)n 510 + 42 1817 0 5 180,711,190,278,178, 0,195,1092,1296,1597, +,+,+,+,+, 720329 Simple_repeat Simple_repeat 585 chrUn_NT_474216v1 2211 3762 (CGAGG)n 508 + 2211 3762 0 5 252,119,174,495,183, 0,434,610,831,1368, +,+,+,+,+, 720333 Simple_repeat Simple_repeat 585 chrUn_NT_474216v1 3896 4300 (CGAGG)n 488 + 3896 4300 0 2 182,179, 0,225, +,+, 720336 Simple_repeat Simple_repeat 585 chrUn_NT_474218v1 1364 4620 CR1-D 647 - 1364 4620 0 4 646,755,888,902, 0,710,1466,2354, -,-,-,-, 720342 LINE CR1 585 chrUn_NT_474218v1 4610 4792 Char12Mar1_GG 582 - 4610 4792 0 2 74,108, 0,74, -,-, 720343 DNA hAT-Charlie 585 chrUn_NT_474219v1 3996 4215 (CCCTC)n 280 + 3996 4215 0 2 57,73, 0,146, +,+, 720350 Simple_repeat Simple_repeat 585 chrUn_NT_474219v1 4701 4842 (CCCTT)n 258 + 4701 4842 0 2 57,26, 0,115, +,+, 720354 Simple_repeat Simple_repeat 585 chrUn_NT_474220v1 2332 3379 GGXHOI 370 + 2332 3379 0 2 468,516, 0,531, +,+, 720361 Satellite W-chromosome 585 chrUn_NT_474224v1 47 2350 GGXHOI 529 + 47 2350 0 4 773,228,463,347, 0,805,1283,1956, +,+,+,+, 720382 Satellite W-chromosome 585 chrUn_NT_474224v1 2495 4803 GGXHOI 487 + 2495 4803 0 4 111,440,392,205, 0,167,1146,2103, +,+,+,+, 720385 Satellite W-chromosome 585 chrUn_NT_474232v1 4583 4874 GGLTR7-int 721 + 4583 4874 0 2 200,91, 0,200, +,+, 720436 LTR ERV1 585 chrUn_NT_474233v1 3759 4239 GGXHOI 482 - 3759 4239 0 2 312,153, 0,327, -,-, 720438 Satellite W-chromosome 585 chrUn_NT_474239v1 671 1444 GGXHOI 591 - 671 1444 0 2 243,519, 0,254, -,-, 720472 Satellite W-chromosome 585 chrUn_NT_474239v1 1545 4837 GGXHOI 551 - 1545 4837 0 4 643,431,904,310, 0,1315,1762,2982, -,-,-,-, 720474 Satellite W-chromosome 585 chrUn_NT_474241v1 2074 4864 GGXHOI 426 - 2074 4864 0 7 391,301,269,144,618,512,422, 0,403,721,1016,1177,1809,2368, -,-,-,-,-,-,-, 720482 Satellite W-chromosome 585 chrUn_NT_474242v1 2995 3810 GGXHOI 381 - 2995 3810 0 3 289,110,358, 0,332,457, -,-,-, 720487 Satellite W-chromosome 585 chrUn_NT_474244v1 1045 2405 GGXHOI 312 - 1045 2405 0 3 428,382,430, 0,490,930, -,-,-, 720495 Satellite W-chromosome 585 chrUn_NT_474244v1 3824 4783 GGXHOI 305 - 3824 4783 0 3 266,137,503, 0,287,456, -,-,-, 720498 Satellite W-chromosome 585 chrUn_NT_474245v1 502 706 (TTAGG)n 656 + 502 706 0 2 9,16, 0,188, +,+, 720500 Simple_repeat Simple_repeat 585 chrUn_NT_474245v1 1709 2074 (TTAGGG)n 658 + 1709 2074 0 2 120,66, 0,299, +,+, 720505 Simple_repeat Simple_repeat 585 chrUn_NT_474245v1 2173 2696 (TTAGGG)n 628 + 2173 2696 0 2 277,75, 0,448, +,+, 720508 Simple_repeat Simple_repeat 585 chrUn_NT_474245v1 2797 4465 (TTAGGG)n 565 + 2797 4465 0 6 195,214,190,223,206,524, 0,222,452,687,910,1144, +,+,+,+,+,+, 720510 Simple_repeat Simple_repeat 585 chrUn_NT_474246v1 2253 3215 (ACCCATAGGG)n 637 + 2253 3215 0 3 458,116,275, 0,459,687, +,+,+, 720517 Satellite Satellite 585 chrUn_NT_474246v1 3081 3913 (ACCCATAGAG)n 646 + 3081 3913 0 3 96,165,285, 0,334,547, +,+,+, 720519 Satellite Satellite 585 chrUn_NT_474246v1 3177 3415 (CTCTATGGGG)n 548 - 3177 3415 0 2 58,61, 0,177, -,-, 720520 Satellite Satellite 585 chrUn_NT_474246v1 4555 4857 (ACCCATAGAG)n 536 + 4555 4857 0 2 90,96, 0,206, +,+, 720527 Satellite Satellite 585 chrUn_NT_474247v1 2071 3051 GGXHOI 345 + 2071 3051 0 2 270,656, 0,324, +,+, 720532 Satellite W-chromosome 585 chrUn_NT_474247v1 3146 4123 GGXHOI 342 + 3146 4123 0 2 253,670, 0,307, +,+, 720533 Satellite W-chromosome 585 chrUn_NT_474251v1 634 4858 GGXHOI 428 - 634 4858 0 3 3199,604,339, 0,3240,3885, -,-,-, 720556 Satellite W-chromosome 585 chrUn_NT_474254v1 1201 1828 CR1-H 362 - 1201 1828 0 2 382,209, 0,418, -,-, 720571 LINE CR1 585 chrUn_NT_474254v1 3726 4363 CR1-H 467 - 3726 4363 0 2 386,93, 0,544, -,-, 720574 LINE CR1 585 chrUn_NT_474258v1 807 3511 GGXHOI 406 - 807 3511 0 4 229,1494,150,785, 0,241,1757,1919, -,-,-,-, 720586 Satellite W-chromosome 585 chrUn_NT_474258v1 3720 4848 GGXHOI 362 - 3720 4848 0 2 438,674, 0,454, -,-, 720587 Satellite W-chromosome 585 chrUn_NT_474259v1 599 981 (CAAGG)n 628 + 599 981 0 2 111,98, 0,284, +,+, 720591 Simple_repeat Simple_repeat 585 chrUn_NT_474259v1 1001 1987 CR1-F0 847 + 1001 1987 0 2 546,433, 0,553, +,+, 720593 LINE CR1 585 chrUn_NT_474261v1 1815 4844 GGXHOI 449 - 1815 4844 0 9 389,356,148,228,343,147,315,695,198, 0,404,778,976,1247,1602,1768,2113,2831, -,-,-,-,-,-,-,-,-, 720599 Satellite W-chromosome 585 chrUn_NT_474267v1 1357 4758 GGXHOI 364 + 1357 4758 0 4 328,2062,608,310, 0,360,2441,3091, +,+,+,+, 720631 Satellite W-chromosome 585 chrUn_NT_474268v1 360 772 (CAAGG)n 593 + 360 772 0 2 183,229, 0,183, +,+, 720635 Simple_repeat Simple_repeat 585 chrUn_NT_474268v1 843 1923 (CAAGG)n 648 + 843 1923 0 3 430,185,396, 0,457,684, +,+,+, 720637 Simple_repeat Simple_repeat 585 chrUn_NT_474268v1 2005 2544 (CAAGG)n 612 + 2005 2544 0 2 253,100, 0,439, +,+, 720638 Simple_repeat Simple_repeat 585 chrUn_NT_474268v1 4222 4833 (CAAGG)n 571 + 4222 4833 0 2 202,409, 0,202, +,+, 720649 Simple_repeat Simple_repeat 585 chrUn_NT_474273v1 3474 4820 GGXHOI 364 + 3474 4820 0 2 236,1060, 0,286, +,+, 720699 Satellite W-chromosome 585 chrUn_NT_474274v1 849 1079 (CTCTATGGGG)n 464 - 849 1079 0 2 103,116, 0,114, -,-, 720705 Satellite Satellite 585 chrUn_NT_474274v1 1801 2115 (ACCCCATAGGG)n 470 + 1801 2115 0 2 149,129, 0,185, +,+, 720711 Satellite Satellite 585 chrUn_NT_474274v1 2296 2573 (CTCTATGGGG)n 422 - 2296 2573 0 2 112,41, 0,236, -,-, 720713 Satellite Satellite 585 chrUn_NT_474274v1 2878 3472 (ACCCCATAGGG)n 546 + 2878 3472 0 3 121,264,178, 0,133,416, +,+,+, 720716 Satellite Satellite 585 chrUn_NT_474275v1 988 2346 GGLTR7-int 656 + 988 2346 0 3 585,172,600, 0,585,758, +,+,+, 720726 LTR ERV1 585 chrUn_NT_474276v1 1739 2189 GGXHOI 339 + 1739 2189 0 2 343,66, 0,384, +,+, 720731 Satellite W-chromosome 585 chrUn_NT_474276v1 2541 4046 GGXHOI 318 + 2541 4046 0 3 809,124,491, 0,869,1014, +,+,+, 720732 Satellite W-chromosome 585 chrUn_NT_474277v1 1311 2267 GGXHOI 404 - 1311 2267 0 2 345,595, 0,361, -,-, 720735 Satellite W-chromosome 585 chrUn_NT_474277v1 2410 4818 GGXHOI 385 - 2410 4818 0 3 1460,368,535, 0,1491,1873, -,-,-, 720736 Satellite W-chromosome 585 chrUn_NT_474280v1 4364 4547 (C)n 818 + 4364 4547 0 4 19,49,28,33, 0,31,94,150, +,+,+,+, 720746 Simple_repeat Simple_repeat 585 chrUn_NT_474281v1 2822 4263 GGXHOI 413 - 2822 4263 0 3 359,806,242, 0,374,1199, -,-,-, 720749 Satellite W-chromosome 585 chrUn_NT_474284v1 543 1160 (GCCTG)n 518 + 543 1160 0 3 158,60,34, 0,339,583, +,+,+, 720792 Simple_repeat Simple_repeat 585 chrUn_NT_474285v1 2741 3795 (TTAGGG)n 562 + 2741 3795 0 3 421,214,33, 0,623,1021, +,+,+, 720805 Simple_repeat Simple_repeat 585 chrUn_NT_474288v1 2488 3622 GGXHOI 585 + 2488 3622 0 4 146,18,158,17, 0,608,645,1117, +,+,+,+, 720827 Satellite W-chromosome 585 chrUn_NT_474288v1 3702 4586 GGXHOI 528 + 3702 4586 0 2 270,219, 0,665, +,+, 720830 Satellite W-chromosome 585 chrUn_NT_474290v1 1160 1585 (CGAGG)n 515 + 1160 1585 0 2 181,197, 0,228, +,+, 720837 Simple_repeat Simple_repeat 585 chrUn_NT_474290v1 1662 2375 (CGAGG)n 523 + 1662 2375 0 3 178,195,298, 0,201,415, +,+,+, 720839 Simple_repeat Simple_repeat 585 chrUn_NT_474290v1 2498 3793 (CGAGG)n 531 + 2498 3793 0 3 363,277,413, 0,422,882, +,+,+, 720841 Simple_repeat Simple_repeat 585 chrUn_NT_474290v1 3773 4294 (CGAGG)n 602 + 3773 4294 0 2 229,282, 0,239, +,+, 720844 Simple_repeat Simple_repeat 585 chrUn_NT_474290v1 4294 4628 (CCTCG)n 502 + 4294 4628 0 2 139,184, 0,150, +,+, 720845 Simple_repeat Simple_repeat 585 chrUn_NT_474292v1 4191 4820 GGLTR7A 801 - 4191 4820 0 2 587,34, 0,595, -,-, 720856 LTR ERV1 585 chrUn_NT_474293v1 4010 4807 GGXHOI 426 - 4010 4807 0 2 603,146, 0,651, -,-, 720859 Satellite W-chromosome 585 chrUn_NT_474294v1 369 1704 (CAAGG)n 626 + 369 1704 0 4 503,145,41,411, 0,538,871,924, +,+,+,+, 720862 Simple_repeat Simple_repeat 585 chrUn_NT_474294v1 2019 2538 (CAAGG)n 606 + 2019 2538 0 2 185,158, 0,361, +,+, 720866 Simple_repeat Simple_repeat 585 chrUn_NT_474294v1 2564 3601 (CAAGG)n 620 + 2564 3601 0 3 184,284,102, 0,184,935, +,+,+, 720869 Simple_repeat Simple_repeat 585 chrUn_NT_474294v1 3739 4113 (CAAGG)n 619 + 3739 4113 0 2 179,184, 0,190, +,+, 720872 Simple_repeat Simple_repeat 585 chrUn_NT_474294v1 4173 4788 (CAAGG)n 617 + 4173 4788 0 3 220,172,181, 0,232,434, +,+,+, 720874 Simple_repeat Simple_repeat 585 chrUn_NT_474301v1 1657 1838 (GCCAC)n 397 + 1657 1838 0 2 77,47, 0,134, +,+, 720893 Simple_repeat Simple_repeat 585 chrUn_NT_474302v1 2642 4789 GGXHOI 369 + 2642 4789 0 2 211,1877, 0,270, +,+, 720903 Satellite W-chromosome 585 chrUn_NT_474307v1 4137 4801 CR1-C4 206 + 4137 4801 0 2 295,289, 0,375, +,+, 720932 LINE CR1 585 chrUn_NT_474308v1 1919 3208 (CAAGG)n 600 + 1919 3208 0 3 191,7,678, 0,435,611, +,+,+, 720937 Simple_repeat Simple_repeat 585 chrUn_NT_474308v1 3257 4042 (CAAGG)n 630 + 3257 4042 0 3 232,226,314, 0,245,471, +,+,+, 720941 Simple_repeat Simple_repeat 585 chrUn_NT_474309v1 1686 2945 GGLTR7-int 275 - 1686 2945 0 3 277,227,100, 0,930,1159, -,-,-, 720946 LTR ERV1 585 chrUn_NT_474309v1 3677 4801 GGERVL-B-int 746 - 3677 4801 0 2 865,259, 0,865, -,-, 720948 LTR ERVL 585 chrUn_NT_474312v1 2423 2483 (C)n 944 + 2423 2483 0 2 19,25, 0,35, +,+, 720965 Simple_repeat Simple_repeat 585 chrUn_NT_474317v1 4308 4795 GGXHOI 572 + 4308 4795 0 2 13,154, 0,333, +,+, 720977 Satellite W-chromosome 585 chrUn_NT_474318v1 1037 4112 GGXHOI 369 + 1037 4112 0 3 1028,1006,960, 0,1091,2115, +,+,+, 720980 Satellite W-chromosome 585 chrUn_NT_474319v1 697 1481 GGXHOI 347 + 697 1481 0 3 198,147,364, 0,212,420, +,+,+, 720983 Satellite W-chromosome 585 chrUn_NT_474319v1 1732 2401 GGXHOI 454 + 1732 2401 0 2 99,558, 0,111, +,+, 720984 Satellite W-chromosome 585 chrUn_NT_474319v1 2572 3062 GGXHOI 319 + 2572 3062 0 2 155,284, 0,206, +,+, 720985 Satellite W-chromosome 585 chrUn_NT_474319v1 3276 4093 GGXHOI 387 + 3276 4093 0 4 136,101,322,163, 0,170,313,654, +,+,+,+, 720986 Satellite W-chromosome 585 chrUn_NT_474321v1 92 1808 (CAAGG)n 579 + 92 1808 0 5 152,399,24,227,89, 0,340,1166,1201,1627, +,+,+,+,+, 720991 Simple_repeat Simple_repeat 585 chrUn_NT_474321v1 1959 3041 (CAAGG)n 616 + 1959 3041 0 3 185,166,555, 0,191,527, +,+,+, 720996 Simple_repeat Simple_repeat 585 chrUn_NT_474323v1 2641 3029 (ACCCCATAGGG)n 557 + 2641 3029 0 2 126,229, 0,159, +,+, 721024 Satellite Satellite 585 chrUn_NT_474325v1 2082 2666 (ACCCATAGGG)n 398 - 2082 2666 0 4 125,106,125,106, 0,165,312,478, -,-,-,-, 721038 Satellite Satellite 585 chrUn_NT_474325v1 2772 3054 (ACCCATAGGG)n 377 - 2772 3054 0 2 134,107, 0,175, -,-, 721039 Satellite Satellite 585 chrUn_NT_474326v1 3359 4087 (TTCGG)n 364 + 3359 4087 0 4 170,186,186,139, 0,188,389,589, +,+,+,+, 721051 Simple_repeat Simple_repeat 585 chrUn_NT_474326v1 4182 4569 (TTCGG)n 351 + 4182 4569 0 2 189,171, 0,216, +,+, 721053 Simple_repeat Simple_repeat 585 chrUn_NT_474328v1 1938 3066 GGXHOI 376 + 1938 3066 0 3 247,164,652, 0,296,476, +,+,+, 721064 Satellite W-chromosome 585 chrUn_NT_474328v1 3573 4344 GGXHOI 330 + 3573 4344 0 3 220,148,338, 0,244,433, +,+,+, 721066 Satellite W-chromosome 585 chrUn_NT_474329v1 341 1094 (CAAGG)n 560 + 341 1094 0 2 202,111, 0,642, +,+, 721070 Simple_repeat Simple_repeat 585 chrUn_NT_474329v1 1133 2278 (CAAGG)n 613 + 1133 2278 0 4 156,59,211,259, 0,400,459,886, +,+,+,+, 721074 Simple_repeat Simple_repeat 585 chrUn_NT_474329v1 2803 3219 (CAGGC)n 472 + 2803 3219 0 2 209,30, 0,386, +,+, 721079 Simple_repeat Simple_repeat 585 chrUn_NT_474329v1 3301 4605 GGXHOI 348 + 3301 4605 0 2 1018,234, 0,1070, +,+, 721081 Satellite W-chromosome 585 chrUn_NT_474332v1 2455 4407 GGXHOI 557 - 2455 4407 0 3 552,677,658, 0,594,1294, -,-,-, 721088 Satellite W-chromosome 585 chrUn_NT_474332v1 4473 4786 GGXHOI 538 - 4473 4786 0 2 208,79, 0,234, -,-, 721089 Satellite W-chromosome 585 chrUn_NT_474334v1 1473 4211 GGXHOI 467 + 1473 4211 0 7 413,433,162,232,266,420,658, 0,435,914,1093,1341,1629,2080, +,+,+,+,+,+,+, 721094 Satellite W-chromosome 585 chrUn_NT_474337v1 1125 2632 (GAGTG)n 426 + 1125 2632 0 5 535,182,185,205,143, 0,546,741,981,1364, +,+,+,+,+, 721117 Simple_repeat Simple_repeat 585 chrUn_NT_474337v1 3134 4798 GGERVL-B-int 728 - 3134 4798 0 2 1319,345, 0,1319, -,-, 721121 LTR ERVL 585 chrUn_NT_474341v1 2601 3661 GGLTR7A 826 - 2601 3661 0 2 604,455, 0,605, -,-, 721138 LTR ERV1 585 chrUn_NT_474341v1 4186 4619 GGLTR7A 861 - 4186 4619 0 2 254,179, 0,254, -,-, 721140 LTR ERV1 585 chrUn_NT_474342v1 4107 4281 (ACCCCATAGGG)n 441 - 4107 4281 0 2 94,64, 0,110, -,-, 721155 Satellite Satellite 585 chrUn_NT_474349v1 1277 1768 (CAAGG)n 576 + 1277 1768 0 2 364,112, 0,379, +,+, 721171 Simple_repeat Simple_repeat 585 chrUn_NT_474349v1 3949 4711 GGXHOI 341 + 3949 4711 0 2 224,506, 0,256, +,+, 721180 Satellite W-chromosome 585 chrUn_NT_474350v1 784 2774 GGXHOI 554 - 784 2774 0 2 731,942, 0,1048, -,-, 721183 Satellite W-chromosome 585 chrUn_NT_474350v1 2224 4757 Sat-CR1_GG 194 - 2224 4757 0 2 597,869, 0,1664, -,-, 721184 Satellite Satellite 585 chrUn_NT_474353v1 887 1195 (ACCCATAGAG)n 476 + 887 1195 0 2 125,122, 0,186, +,+, 721210 Satellite Satellite 585 chrUn_NT_474353v1 1382 2023 (ACCCATAGAG)n 683 + 1382 2023 0 3 300,153,187, 0,301,454, +,+,+, 721212 Satellite Satellite 585 chrUn_NT_474353v1 2064 2354 (ACCCATAGGG)n 580 + 2064 2354 0 2 124,154, 0,136, +,+, 721213 Satellite Satellite 585 chrUn_NT_474353v1 2870 3545 (ACCCATAGGG)n 690 + 2870 3545 0 2 395,166, 0,509, +,+, 721218 Satellite Satellite 585 chrUn_NT_474353v1 3265 3725 (ACCCCATAGGG)n 687 + 3265 3725 0 2 114,346, 0,114, +,+, 721219 Satellite Satellite 585 chrUn_NT_474353v1 3557 3805 (ACCCATAGGG)n 682 - 3557 3805 0 2 123,17, 0,231, -,-, 721220 Satellite Satellite 585 chrUn_NT_474354v1 421 1461 GGXHOI 396 - 421 1461 0 2 181,845, 0,195, -,-, 721229 Satellite W-chromosome 585 chrUn_NT_474354v1 1565 4198 GGXHOI 367 - 1565 4198 0 5 1087,128,454,343,428, 0,1122,1306,1819,2205, -,-,-,-,-, 721230 Satellite W-chromosome 585 chrUn_NT_474356v1 978 1387 (ACCCCATAGGG)n 630 - 978 1387 0 3 109,23,32, 0,232,377, -,-,-, 721240 Satellite Satellite 585 chrUn_NT_474356v1 2087 2343 (ACCCCATAGGG)n 668 + 2087 2343 0 2 92,42, 0,214, +,+, 721248 Satellite Satellite 585 chrUn_NT_474356v1 2422 2981 (CTCTATGGGG)n 730 + 2422 2981 0 2 174,12, 0,547, +,+, 721250 Satellite Satellite 585 chrUn_NT_474356v1 3055 3429 (CTCTATGGGG)n 762 + 3055 3429 0 2 238,12, 0,362, +,+, 721254 Satellite Satellite 585 chrUn_NT_474356v1 4212 4754 (ACCCCATAGGG)n 645 - 4212 4754 0 4 124,57,113,126, 0,167,263,416, -,-,-,-, 721260 Satellite Satellite 585 chrUn_NT_474358v1 3580 4740 GGXHOI 498 + 3580 4740 0 5 24,65,180,147,158, 0,194,612,819,1002, +,+,+,+,+, 721267 Satellite W-chromosome 585 chrUn_NT_474359v1 299 1188 (CGAGG)n 537 + 299 1188 0 3 111,365,173, 0,292,716, +,+,+, 721271 Simple_repeat Simple_repeat 585 chrUn_NT_474359v1 1347 2455 (CGAGG)n 541 + 1347 2455 0 2 524,529, 0,579, +,+, 721274 Simple_repeat Simple_repeat 585 chrUn_NT_474362v1 2752 3316 (CGAGG)n 483 + 2752 3316 0 2 347,178, 0,386, +,+, 721293 Simple_repeat Simple_repeat 585 chrUn_NT_474362v1 3847 4232 (CGAGG)n 548 + 3847 4232 0 2 179,178, 0,207, +,+, 721296 Simple_repeat Simple_repeat 585 chrUn_NT_474363v1 2946 4171 GGXHOI 353 - 2946 4171 0 2 195,1013, 0,212, -,-, 721301 Satellite W-chromosome 585 chrUn_NT_474364v1 579 660 (C)n 728 + 579 660 0 2 19,32, 0,49, +,+, 721305 Simple_repeat Simple_repeat 585 chrUn_NT_474364v1 3317 3463 (T)n 865 + 3317 3463 0 2 50,38, 0,108, +,+, 721311 Simple_repeat Simple_repeat 585 chrUn_NT_474364v1 4302 4376 (G)n 805 + 4302 4376 0 2 28,27, 0,47, +,+, 721318 Simple_repeat Simple_repeat 585 chrUn_NT_474367v1 2277 4576 GGXHOI 536 - 2277 4576 0 5 19,180,377,303,209, 0,328,832,1518,2090, -,-,-,-,-, 721333 Satellite W-chromosome 585 chrUn_NT_474368v1 1838 3112 GGXHOI 344 - 1838 3112 0 2 624,634, 0,640, -,-, 721341 Satellite W-chromosome 585 chrUn_NT_474370v1 309 581 (ACCCATAGGG)n 491 + 309 581 0 2 117,115, 0,157, +,+, 721357 Satellite Satellite 585 chrUn_NT_474370v1 3581 3855 (ACCCATAGGG)n 502 + 3581 3855 0 2 118,116, 0,158, +,+, 721376 Satellite Satellite 585 chrUn_NT_474373v1 3187 4742 GGXHOI 396 + 3187 4742 0 5 133,104,655,294,301, 0,145,279,948,1254, +,+,+,+,+, 721389 Satellite W-chromosome 585 chrUn_NT_474374v1 1622 2175 (ACCCCATAGGG)n 595 + 1622 2175 0 3 215,139,137, 0,264,416, +,+,+, 721392 Satellite Satellite 585 chrUn_NT_474374v1 2250 2811 (ACCCCATAGGG)n 567 + 2250 2811 0 3 140,140,220, 0,189,341, +,+,+, 721393 Satellite Satellite 585 chrUn_NT_474374v1 2888 4748 (ACCCCATAGGG)n 580 + 2888 4748 0 8 399,140,329,140,200,141,182,31, 0,448,600,944,1107,1344,1523,1829, +,+,+,+,+,+,+,+, 721394 Satellite Satellite 585 chrUn_NT_474378v1 270 934 (CTCTATGGGG)n 563 - 270 934 0 4 121,119,120,233, 0,155,299,431, -,-,-,-, 721417 Satellite Satellite 585 chrUn_NT_474378v1 1567 2575 (GCCCCACAGCT)n 495 - 1567 2575 0 5 394,110,20,130,128, 0,440,680,737,880, -,-,-,-,-, 721419 Satellite Satellite 585 chrUn_NT_474378v1 3250 3645 (TACTG)n 315 + 3250 3645 0 2 185,176, 0,219, +,+, 721422 Simple_repeat Simple_repeat 585 chrUn_NT_474384v1 3506 4661 GGXHOI 428 + 3506 4661 0 3 364,129,571, 0,406,584, +,+,+, 721449 Satellite W-chromosome 585 chrUn_NT_474391v1 566 1269 (CGAGG)n 474 + 566 1269 0 3 211,49,418, 0,225,285, +,+,+, 721467 Simple_repeat Simple_repeat 585 chrUn_NT_474391v1 1455 2006 (CGAGG)n 575 + 1455 2006 0 2 174,377, 0,174, +,+, 721469 Simple_repeat Simple_repeat 585 chrUn_NT_474391v1 2651 4717 (CGAGG)n 584 + 2651 4717 0 6 232,166,289,20,235,220, 0,294,623,1382,1434,1846, +,+,+,+,+,+, 721473 Simple_repeat Simple_repeat 585 chrUn_NT_474394v1 578 3425 GGXHOI 329 - 578 3425 0 6 1079,630,206,124,553,126, 0,1091,1772,2013,2151,2721, -,-,-,-,-,-, 721492 Satellite W-chromosome 585 chrUn_NT_474396v1 1127 4714 GGXHOI 352 - 1127 4714 0 12 132,175,129,133,449,526,314,136,179,134,573,330, 0,176,362,506,668,1180,1755,2084,2264,2494,2668,3257, -,-,-,-,-,-,-,-,-,-,-,-, 721498 Satellite W-chromosome 585 chrUn_NT_474398v1 629 1032 (CGAGG)n 444 + 629 1032 0 2 188,188, 0,215, +,+, 721517 Simple_repeat Simple_repeat 585 chrUn_NT_474398v1 2571 3026 (CGAGG)n 630 + 2571 3026 0 2 50,360, 0,95, +,+, 721525 Simple_repeat Simple_repeat 585 chrUn_NT_474398v1 3893 4703 (CGAGG)n 464 + 3893 4703 0 2 679,115, 0,695, +,+, 721529 Simple_repeat Simple_repeat 585 chrUn_NT_474401v1 1194 1503 (TTAGGG)n 424 + 1194 1503 0 2 211,42, 0,267, +,+, 721533 Simple_repeat Simple_repeat 585 chrUn_NT_474401v1 1553 2099 (TTAGGG)n 567 + 1553 2099 0 2 155,356, 0,190, +,+, 721535 Simple_repeat Simple_repeat 585 chrUn_NT_474401v1 2383 3180 (TTAGGG)n 580 + 2383 3180 0 2 257,353, 0,444, +,+, 721539 Simple_repeat Simple_repeat 585 chrUn_NT_474401v1 3250 4334 (TTAGGG)n 571 + 3250 4334 0 4 200,172,476,191, 0,230,402,893, +,+,+,+, 721542 Simple_repeat Simple_repeat 585 chrUn_NT_474405v1 1546 1979 (CAGA)n 447 + 1546 1979 0 2 181,238, 0,195, +,+, 721554 Simple_repeat Simple_repeat 585 chrUn_NT_474406v1 273 462 (CCCCATTGGG)n 438 + 273 462 0 2 48,94, 0,95, +,+, 721557 Satellite Satellite 585 chrUn_NT_474406v1 1869 2035 (CCCCATTGGG)n 280 + 1869 2035 0 2 38,43, 0,123, +,+, 721566 Satellite Satellite 585 chrUn_NT_474409v1 2142 2241 (C)n 907 + 2142 2241 0 2 23,21, 0,78, +,+, 721580 Simple_repeat Simple_repeat 585 chrUn_NT_474410v1 2051 3411 (CTCTATGGGG)n 687 - 2051 3411 0 6 122,327,116,118,241,192, 0,184,557,708,882,1168, -,-,-,-,-,-, 721600 Satellite Satellite 585 chrUn_NT_474412v1 354 1450 GGXHOI 385 - 354 1450 0 2 523,558, 0,538, -,-, 721606 Satellite W-chromosome 585 chrUn_NT_474412v1 1573 2210 GGXHOI 450 - 1573 2210 0 3 179,68,329, 0,226,308, -,-,-, 721607 Satellite W-chromosome 585 chrUn_NT_474412v1 2289 4706 GGXHOI 386 - 2289 4706 0 5 593,269,775,206,497, 0,619,910,1701,1920, -,-,-,-,-, 721608 Satellite W-chromosome 585 chrUn_NT_474413v1 3274 4718 CR1-F 884 - 3274 4718 0 2 347,1097, 0,347, -,-, 721616 LINE CR1 585 chrUn_NT_474417v1 2367 4646 GGXHOI 330 - 2367 4646 0 5 351,723,590,357,135, 0,406,1146,1747,2144, -,-,-,-,-, 721627 Satellite W-chromosome 585 chrUn_NT_474420v1 1807 2478 GGXHOI 316 - 1807 2478 0 2 233,412, 0,259, -,-, 721641 Satellite W-chromosome 585 chrUn_NT_474420v1 2849 3894 GGXHOI 384 - 2849 3894 0 2 138,889, 0,156, -,-, 721642 Satellite W-chromosome 585 chrUn_NT_474424v1 810 1303 CR1-X 372 + 810 1303 0 2 168,221, 0,272, +,+, 721664 LINE CR1 585 chrUn_NT_474426v1 670 1480 (CCCTAA)n 592 + 670 1480 0 2 399,232, 0,578, +,+, 721674 Simple_repeat Simple_repeat 585 chrUn_NT_474426v1 1525 2702 (CCCTAA)n 576 + 1525 2702 0 4 176,181,334,242, 0,197,425,935, +,+,+,+, 721677 Simple_repeat Simple_repeat 585 chrUn_NT_474426v1 3346 3912 (CCCTAA)n 643 + 3346 3912 0 2 365,182, 0,384, +,+, 721682 Simple_repeat Simple_repeat 585 chrUn_NT_474427v1 522 1037 (CTCTATGGGG)n 584 + 522 1037 0 4 48,42,121,116, 0,172,242,399, +,+,+,+, 721691 Satellite Satellite 585 chrUn_NT_474427v1 1131 1409 (CTCTATGGGG)n 612 + 1131 1409 0 2 115,124, 0,154, +,+, 721693 Satellite Satellite 585 chrUn_NT_474427v1 3932 4199 (CTCTATGGGG)n 527 + 3932 4199 0 2 115,141, 0,126, +,+, 721701 Satellite Satellite 585 chrUn_NT_474427v1 4308 4715 (CTCTATGGGG)n 617 + 4308 4715 0 2 257,117, 0,290, +,+, 721702 Satellite Satellite 585 chrUn_NT_474428v1 590 2221 (CCTCG)n 459 + 590 2221 0 4 233,942,176,182, 0,253,1214,1449, +,+,+,+, 721705 Simple_repeat Simple_repeat 585 chrUn_NT_474429v1 1123 3013 GGXHOI 358 - 1123 3013 0 2 947,925, 0,965, -,-, 721715 Satellite W-chromosome 585 chrUn_NT_474429v1 3350 4043 GGXHOI 350 - 3350 4043 0 2 495,170, 0,523, -,-, 721716 Satellite W-chromosome 585 chrUn_NT_474430v1 2310 2920 (AGCTG)n 244 + 2310 2920 0 3 163,174,178, 0,208,432, +,+,+, 721735 Simple_repeat Simple_repeat 585 chrUn_NT_474430v1 3635 4049 (TCCGG)n 492 + 3635 4049 0 2 144,57, 0,357, +,+, 721742 Simple_repeat Simple_repeat 585 chrUn_NT_474431v1 2430 3999 GGXHOI 369 - 2430 3999 0 3 766,135,609, 0,782,960, -,-,-, 721750 Satellite W-chromosome 585 chrUn_NT_474432v1 102 915 (CGAGG)n 498 + 102 915 0 3 300,241,185, 0,359,628, +,+,+, 721754 Simple_repeat Simple_repeat 585 chrUn_NT_474432v1 1857 2471 (CGAGG)n 500 + 1857 2471 0 2 339,97, 0,517, +,+, 721760 Simple_repeat Simple_repeat 585 chrUn_NT_474432v1 2957 3384 (CGAGG)n 511 + 2957 3384 0 2 199,180, 0,247, +,+, 721766 Simple_repeat Simple_repeat 585 chrUn_NT_474432v1 3497 3886 (CGAGG)n 563 + 3497 3886 0 2 305,70, 0,319, +,+, 721767 Simple_repeat Simple_repeat 585 chrUn_NT_474433v1 4284 4643 EAVHP_I-int 379 + 4284 4643 0 2 133,81, 0,278, +,+, 721776 LTR ERVK 585 chrUn_NT_474434v1 2545 2978 Sat-CR1_GG 184 - 2545 2978 0 2 24,166, 0,267, -,-, 721783 Satellite Satellite 585 chrUn_NT_474435v1 2912 4672 GGXHOI 398 - 2912 4672 0 7 257,99,141,185,439,272,260, 0,270,384,548,755,1210,1500, -,-,-,-,-,-,-, 721793 Satellite W-chromosome 585 chrUn_NT_474436v1 1554 2590 GGXHOI 544 + 1554 2590 0 3 212,192,18, 0,520,1018, +,+,+, 721797 Satellite W-chromosome 585 chrUn_NT_474436v1 2666 3684 GGXHOI 528 + 2666 3684 0 3 201,219,25, 0,497,993, +,+,+, 721800 Satellite W-chromosome 585 chrUn_NT_474436v1 3754 4701 GGXHOI 558 + 3754 4701 0 2 276,477, 0,470, +,+, 721803 Satellite W-chromosome 585 chrUn_NT_474438v1 2593 3006 (ACCCCATAGGG)n 361 + 2593 3006 0 2 252,126, 0,287, +,+, 721821 Satellite Satellite 585 chrUn_NT_474438v1 3639 3999 (ACCCCATAGGG)n 358 + 3639 3999 0 2 121,218, 0,142, +,+, 721824 Satellite Satellite 585 chrUn_NT_474442v1 197 1111 (CAAGG)n 540 + 197 1111 0 3 366,29,149, 0,551,765, +,+,+, 721838 Simple_repeat Simple_repeat 585 chrUn_NT_474442v1 1840 3359 (CAAGG)n 591 + 1840 3359 0 6 249,22,206,171,68,182, 0,515,557,802,1247,1337, +,+,+,+,+,+, 721846 Simple_repeat Simple_repeat 585 chrUn_NT_474442v1 3371 4066 (CAAGG)n 556 + 3371 4066 0 3 69,61,381, 0,237,314, +,+,+, 721850 Simple_repeat Simple_repeat 585 chrUn_NT_474446v1 2939 3071 (GTTCTTTCC)n 974 + 2939 3071 0 2 39,39, 0,93, +,+, 721896 Simple_repeat Simple_repeat 585 chrUn_NT_474448v1 1194 1749 (CGAGG)n 473 + 1194 1749 0 2 333,188, 0,367, +,+, 721909 Simple_repeat Simple_repeat 585 chrUn_NT_474448v1 3821 4192 (CGAGG)n 507 + 3821 4192 0 2 172,188, 0,183, +,+, 721917 Simple_repeat Simple_repeat 585 chrUn_NT_474450v1 3771 4693 GGXHOI 338 - 3771 4693 0 2 413,447, 0,475, -,-, 721928 Satellite W-chromosome 585 chrUn_NT_474453v1 2224 2471 (CTCTATGGGG)n 574 + 2224 2471 0 2 82,39, 0,208, +,+, 721945 Satellite Satellite 585 chrUn_NT_474453v1 2714 3098 (CTCTATGGGG)n 625 - 2714 3098 0 2 168,214, 0,170, -,-, 721948 Satellite Satellite 585 chrUn_NT_474453v1 3201 3521 (CTCTATGGGG)n 650 + 3201 3521 0 2 124,173, 0,147, +,+, 721949 Satellite Satellite 585 chrUn_NT_474453v1 3483 3869 (CTCTATGGGG)n 616 - 3483 3869 0 2 124,149, 0,237, -,-, 721950 Satellite Satellite 585 chrUn_NT_474456v1 2694 3253 (TCCTC)n 244 + 2694 3253 0 2 352,186, 0,373, +,+, 721967 Simple_repeat Simple_repeat 585 chrUn_NT_474457v1 383 870 (CGAGG)n 600 + 383 870 0 2 186,130, 0,357, +,+, 721979 Simple_repeat Simple_repeat 585 chrUn_NT_474457v1 936 3290 (CGAGG)n 506 + 936 3290 0 7 181,258,725,106,154,354,193, 0,181,480,1390,1496,1792,2161, +,+,+,+,+,+,+, 721982 Simple_repeat Simple_repeat 585 chrUn_NT_474457v1 3437 4662 (CGAGG)n 554 + 3437 4662 0 3 423,350,404, 0,448,821, +,+,+, 721986 Simple_repeat Simple_repeat 585 chrUn_NT_474459v1 542 1863 GGXHOI 417 + 542 1863 0 2 901,403, 0,918, +,+, 721993 Satellite W-chromosome 585 chrUn_NT_474459v1 1962 4664 GGXHOI 436 - 1962 4664 0 9 332,180,91,462,296,142,229,344,406, 0,344,543,655,1131,1444,1647,1891,2296, -,-,-,-,-,-,-,-,-, 721994 Satellite W-chromosome 585 chrUn_NT_474463v1 3288 4675 GGXHOI 416 - 3288 4675 0 3 235,735,371, 0,255,1016, -,-,-, 722015 Satellite W-chromosome 585 chrUn_NT_474467v1 2181 3162 GGXHOI 472 - 2181 3162 0 2 58,903, 0,78, -,-, 722030 Satellite W-chromosome 585 chrUn_NT_474467v1 3230 4472 GGXHOI 313 - 3230 4472 0 3 420,350,416, 0,463,826, -,-,-, 722031 Satellite W-chromosome 585 chrUn_NT_474469v1 1246 1624 (CTCTATGGGG)n 365 + 1246 1624 0 3 74,39,133, 0,206,245, +,+,+, 722037 Satellite Satellite 585 chrUn_NT_474469v1 1638 1996 (ACCCCATAGGG)n 266 + 1638 1996 0 2 205,153, 0,205, +,+, 722039 Satellite Satellite 585 chrUn_NT_474470v1 236 2462 CR1-B2 662 + 236 2462 0 2 55,54, 0,2172, +,+, 722046 LINE CR1 585 chrUn_NT_474470v1 373 472 CR1-E 711 + 373 472 0 2 49,50, 0,49, +,+, 722047 LINE CR1 585 chrUn_NT_474470v1 653 1954 CR1-B2 715 + 653 1954 0 2 49,62, 0,1239, +,+, 722048 LINE CR1 585 chrUn_NT_474470v1 1019 1118 CR1-C4 653 + 1019 1118 0 2 45,52, 0,47, +,+, 722050 LINE CR1 585 chrUn_NT_474470v1 2641 2738 CR1-E 610 + 2641 2738 0 2 49,48, 0,49, +,+, 722064 LINE CR1 585 chrUn_NT_474470v1 3531 4677 (TTCTG)n 505 + 3531 4677 0 4 248,121,197,26, 0,430,564,1120, +,+,+,+, 722068 Simple_repeat Simple_repeat 585 chrUn_NT_474471v1 1277 2601 GGXHOI 350 + 1277 2601 0 4 234,591,254,132, 0,280,891,1192, +,+,+,+, 722072 Satellite W-chromosome 585 chrUn_NT_474471v1 4082 4664 GGXHOI 457 + 4082 4664 0 2 156,404, 0,178, +,+, 722075 Satellite W-chromosome 585 chrUn_NT_474475v1 405 2389 GGXHOI 584 - 405 2389 0 2 136,794, 0,1190, -,-, 722087 Satellite W-chromosome 585 chrUn_NT_474475v1 4295 4676 GGXHOI 612 - 4295 4676 0 2 162,176, 0,205, -,-, 722094 Satellite W-chromosome 585 chrUn_NT_474477v1 4233 4376 G-rich 500 + 4233 4376 0 2 68,48, 0,95, +,+, 722107 Low_complexity Low_complexity 585 chrUn_NT_474481v1 3613 4669 GGXHOI 376 + 3613 4669 0 3 376,521,125, 0,395,931, +,+,+, 722133 Satellite W-chromosome 585 chrUn_NT_474482v1 334 1703 (TTAGGG)n 614 + 334 1703 0 6 144,10,177,184,368,233, 0,323,347,556,767,1136, +,+,+,+,+,+, 722137 Simple_repeat Simple_repeat 585 chrUn_NT_474482v1 1775 2546 (TTAGGG)n 610 + 1775 2546 0 4 174,184,168,188, 0,185,398,583, +,+,+,+, 722140 Simple_repeat Simple_repeat 585 chrUn_NT_474482v1 2815 3615 (TTAGGG)n 532 + 2815 3615 0 2 721,67, 0,733, +,+, 722144 Simple_repeat Simple_repeat 585 chrUn_NT_474482v1 3669 4669 (CCCTAA)n 591 + 3669 4669 0 4 184,406,214,146, 0,214,640,854, +,+,+,+, 722146 Simple_repeat Simple_repeat 585 chrUn_NT_474483v1 2184 4136 GGXHOI 519 - 2184 4136 0 4 197,30,21,1092, 0,478,519,860, -,-,-,-, 722151 Satellite W-chromosome 585 chrUn_NT_474486v1 1506 2410 (CGAGG)n 437 + 1506 2410 0 3 181,270,369, 0,230,535, +,+,+, 722168 Simple_repeat Simple_repeat 585 chrUn_NT_474486v1 2635 3153 (CGAGG)n 473 + 2635 3153 0 2 173,324, 0,194, +,+, 722170 Simple_repeat Simple_repeat 585 chrUn_NT_474486v1 3523 3863 (CGAGG)n 376 + 3523 3863 0 2 145,174, 0,166, +,+, 722174 Simple_repeat Simple_repeat 585 chrUn_NT_474489v1 204 355 (ACCCATTGGG)n 410 + 204 355 0 2 33,72, 0,79, +,+, 722184 Satellite Satellite 585 chrUn_NT_474489v1 863 1020 (ACCCATTGGG)n 318 + 863 1020 0 2 41,52, 0,105, +,+, 722188 Satellite Satellite 585 chrUn_NT_474489v1 1776 2089 (CCCCATTGGG)n 482 + 1776 2089 0 2 25,64, 0,249, +,+, 722193 Satellite Satellite 585 chrUn_NT_474490v1 2374 2662 (CTCTATGGGG)n 584 + 2374 2662 0 2 118,116, 0,172, +,+, 722205 Satellite Satellite 585 chrUn_NT_474490v1 2925 3190 (CTCTATGGGG)n 605 + 2925 3190 0 2 89,119, 0,146, +,+, 722207 Satellite Satellite 585 chrUn_NT_474490v1 3689 4102 (CTCTATGGGG)n 525 + 3689 4102 0 3 116,121,118, 0,149,295, +,+,+, 722208 Satellite Satellite 585 chrUn_NT_474491v1 623 910 (GCCCCACAGCT)n 386 + 623 910 0 2 139,130, 0,157, +,+, 722211 Satellite Satellite 585 chrUn_NT_474491v1 3032 3295 (CTCTATGGGG)n 457 + 3032 3295 0 2 116,117, 0,146, +,+, 722216 Satellite Satellite 585 chrUn_NT_474494v1 2004 3124 CR1-B2 704 - 2004 3124 0 2 890,227, 0,893, -,-, 722236 LINE CR1 585 chrUn_NT_474501v1 2039 3826 GGERVL-C-int 691 + 2039 3826 0 3 214,548,502, 0,736,1285, +,+,+, 722268 LTR ERVL 585 chrUn_NT_474503v1 26 941 GGXHOI 614 + 26 941 0 2 491,27, 0,888, +,+, 722282 Satellite W-chromosome 585 chrUn_NT_474503v1 1092 3128 GGXHOI 554 + 1092 3128 0 3 485,365,635, 0,713,1401, +,+,+, 722284 Satellite W-chromosome 585 chrUn_NT_474503v1 3670 4651 GGXHOI 554 + 3670 4651 0 3 103,190,53, 0,534,928, +,+,+, 722289 Satellite W-chromosome 585 chrUn_NT_474504v1 2334 4649 GGXHOI 399 - 2334 4649 0 2 188,2074, 0,241, -,-, 722293 Satellite W-chromosome 585 chrUn_NT_474505v1 609 1214 (ACCCATAGAG)n 570 - 609 1214 0 3 143,24,33, 0,422,572, -,-,-, 722297 Satellite Satellite 585 chrUn_NT_474505v1 1384 1966 (ACCCCATAGGG)n 641 - 1384 1966 0 2 286,296, 0,286, -,-, 722302 Satellite Satellite 585 chrUn_NT_474505v1 2309 3059 (ACCCCATAGGG)n 592 - 2309 3059 0 3 143,150,335, 0,265,415, -,-,-, 722306 Satellite Satellite 585 chrUn_NT_474505v1 2900 3694 (ACCCATAGAG)n 690 - 2900 3694 0 4 178,134,45,102, 0,182,511,692, -,-,-,-, 722308 Satellite Satellite 585 chrUn_NT_474505v1 3735 4003 (ACCCATAGAG)n 724 - 3735 4003 0 2 122,123, 0,145, -,-, 722312 Satellite Satellite 585 chrUn_NT_474508v1 190 2910 CR1-F 545 + 190 2910 0 8 202,154,201,179,154,203,205,176, 0,465,909,1387,1609,2052,2297,2544, +,+,+,+,+,+,+,+, 722340 LINE CR1 585 chrUn_NT_474508v1 2952 4594 CR1-F 570 + 2952 4594 0 6 173,190,200,202,203,204, 0,219,449,949,1193,1438, +,+,+,+,+,+, 722345 LINE CR1 585 chrUn_NT_474509v1 3545 4622 GGXHOI 327 + 3545 4622 0 3 162,511,353, 0,181,724, +,+,+, 722354 Satellite W-chromosome 585 chrUn_NT_474510v1 1247 3995 GGXHOI 407 + 1247 3995 0 4 402,1471,64,678, 0,458,1986,2070, +,+,+,+, 722356 Satellite W-chromosome 585 chrUn_NT_474511v1 2240 2740 GGXHOI 321 + 2240 2740 0 2 112,362, 0,138, +,+, 722362 Satellite W-chromosome 585 chrUn_NT_474511v1 2840 3771 GGXHOI 384 + 2840 3771 0 2 775,140, 0,791, +,+, 722363 Satellite W-chromosome 585 chrUn_NT_474513v1 4050 4339 (CCCCATTGGG)n 391 - 4050 4339 0 2 98,160, 0,129, -,-, 722374 Satellite Satellite 585 chrUn_NT_474514v1 4083 4362 (ACCCCATAGGG)n 514 + 4083 4362 0 2 91,134, 0,145, +,+, 722378 Satellite Satellite 585 chrUn_NT_474515v1 1100 2727 GGXHOI 387 - 1100 2727 0 2 516,1048, 0,579, -,-, 722381 Satellite W-chromosome 585 chrUn_NT_474517v1 507 1306 (ACCCATAGGG)n 663 + 507 1306 0 3 148,251,358, 0,148,441, +,+,+, 722393 Satellite Satellite 585 chrUn_NT_474517v1 1785 3187 (ACCCATAGGG)n 681 + 1785 3187 0 5 477,61,18,204,174, 0,584,868,903,1228, +,+,+,+,+, 722397 Satellite Satellite 585 chrUn_NT_474517v1 3201 4640 (ACCCATAGGG)n 657 + 3201 4640 0 7 157,132,264,18,117,148,141, 0,401,533,963,1021,1150,1298, +,+,+,+,+,+,+, 722403 Satellite Satellite 585 chrUn_NT_474518v1 1541 4540 GGXHOI 406 - 1541 4540 0 5 717,347,1270,372,159, 0,736,1111,2428,2840, -,-,-,-,-, 722409 Satellite W-chromosome 585 chrUn_NT_474520v1 2367 2688 (CTCTATGGGG)n 735 - 2367 2688 0 2 145,134, 0,187, -,-, 722412 Satellite Satellite 585 chrUn_NT_474520v1 2760 3670 (CTCTATGGGG)n 660 - 2760 3670 0 6 134,126,30,125,30,156, 0,196,442,472,724,754, -,-,-,-,-,-, 722413 Satellite Satellite 585 chrUn_NT_474520v1 3809 4090 (CTCTATGGGG)n 660 - 3809 4090 0 2 95,62, 0,219, -,-, 722418 Satellite Satellite 585 chrUn_NT_474524v1 2121 2177 (C)n 1000 + 2121 2177 0 2 17,20, 0,36, +,+, 722437 Simple_repeat Simple_repeat 585 chrUn_NT_474528v1 650 3469 GGXHOI 379 + 650 3469 0 7 831,306,208,433,136,399,338, 0,879,1222,1446,1914,2066,2481, +,+,+,+,+,+,+, 722453 Satellite W-chromosome 585 chrUn_NT_474529v1 1833 2376 (CTCTATGGGG)n 698 + 1833 2376 0 2 158,271, 0,272, +,+, 722459 Satellite Satellite 585 chrUn_NT_474535v1 272 1681 GGXHOI 378 - 272 1681 0 2 514,832, 0,577, -,-, 722486 Satellite W-chromosome 585 chrUn_NT_474535v1 1861 3397 GGXHOI 369 - 1861 3397 0 2 1002,472, 0,1064, -,-, 722487 Satellite W-chromosome 585 chrUn_NT_474536v1 401 723 (ACCCCATAGGG)n 482 - 401 723 0 2 82,64, 0,258, -,-, 722492 Satellite Satellite 585 chrUn_NT_474536v1 1814 2164 (ACCCATAGGG)n 297 - 1814 2164 0 2 143,164, 0,186, -,-, 722505 Satellite Satellite 585 chrUn_NT_474536v1 3399 3724 (ACCCCATAGGG)n 526 - 3399 3724 0 2 168,35, 0,290, -,-, 722512 Satellite Satellite 585 chrUn_NT_474537v1 1263 1876 CR1-H 642 - 1263 1876 0 2 136,471, 0,142, -,-, 722518 LINE CR1 585 chrUn_NT_474537v1 4236 4627 CR1-H 667 - 4236 4627 0 2 114,277, 0,114, -,-, 722522 LINE CR1 585 chrUn_NT_474538v1 2754 3772 GGXHOI 364 - 2754 3772 0 2 719,284, 0,734, -,-, 722524 Satellite W-chromosome 585 chrUn_NT_474539v1 198 547 (CAAGG)n 524 + 198 547 0 2 98,68, 0,281, +,+, 722528 Simple_repeat Simple_repeat 585 chrUn_NT_474539v1 1278 2214 (CAAGG)n 590 + 1278 2214 0 3 360,136,106, 0,360,830, +,+,+, 722535 Simple_repeat Simple_repeat 585 chrUn_NT_474539v1 3679 4622 GGXHOI 421 + 3679 4622 0 2 741,188, 0,755, +,+, 722543 Satellite W-chromosome 585 chrUn_NT_474540v1 436 1775 GGXHOI 323 - 436 1775 0 2 739,585, 0,754, -,-, 722545 Satellite W-chromosome 585 chrUn_NT_474545v1 1181 2265 (CAAGG)n 594 + 1181 2265 0 4 467,140,21,75, 0,482,807,1009, +,+,+,+, 722570 Simple_repeat Simple_repeat 585 chrUn_NT_474545v1 2607 3167 (CAAGG)n 662 + 2607 3167 0 2 181,379, 0,181, +,+, 722574 Simple_repeat Simple_repeat 585 chrUn_NT_474545v1 3296 4166 (CAAGG)n 568 + 3296 4166 0 2 275,297, 0,573, +,+, 722576 Simple_repeat Simple_repeat 585 chrUn_NT_474545v1 4075 4476 (CAGGC)n 490 + 4075 4476 0 2 209,12, 0,389, +,+, 722579 Simple_repeat Simple_repeat 585 chrUn_NT_474547v1 633 1145 (CCCCATTGGG)n 444 + 633 1145 0 3 121,110,241, 0,132,271, +,+,+, 722585 Satellite Satellite 585 chrUn_NT_474548v1 2193 4611 GGXHOI 383 - 2193 4611 0 3 299,497,1590, 0,315,828, -,-,-, 722588 Satellite W-chromosome 585 chrUn_NT_474549v1 88 1662 (CGAGG)n 510 + 88 1662 0 2 461,1084, 0,490, +,+, 722591 Simple_repeat Simple_repeat 585 chrUn_NT_474549v1 1748 2327 (CGAGG)n 511 + 1748 2327 0 3 175,182,51, 0,175,528, +,+,+, 722593 Simple_repeat Simple_repeat 585 chrUn_NT_474549v1 3583 4107 (CGAGG)n 494 + 3583 4107 0 2 182,331, 0,193, +,+, 722603 Simple_repeat Simple_repeat 585 chrUn_NT_474549v1 4392 4622 (GAGGC)n 280 + 4392 4622 0 2 61,44, 0,186, +,+, 722606 Simple_repeat Simple_repeat 585 chrUn_NT_474551v1 2869 4258 GGLTR7-int 335 - 2869 4258 0 3 278,232,102, 0,1053,1287, -,-,-, 722614 LTR ERV1 585 chrUn_NT_474552v1 903 2369 GGXHOI 288 + 903 2369 0 2 1272,156, 0,1310, +,+, 722616 Satellite W-chromosome 585 chrUn_NT_474552v1 2437 4616 GGXHOI 365 + 2437 4616 0 4 349,280,618,839, 0,398,705,1340, +,+,+,+, 722617 Satellite W-chromosome 585 chrUn_NT_474554v1 1824 3085 GGXHOI 424 - 1824 3085 0 4 327,134,353,306, 0,362,545,955, -,-,-,-, 722627 Satellite W-chromosome 585 chrUn_NT_474555v1 1419 2467 GGXHOI 396 - 1419 2467 0 2 308,683, 0,365, -,-, 722631 Satellite W-chromosome 585 chrUn_NT_474555v1 2592 4613 GGXHOI 399 - 2592 4613 0 4 853,359,481,279, 0,868,1247,1742, -,-,-,-, 722632 Satellite W-chromosome 585 chrUn_NT_474558v1 447 2379 GGXHOI 396 + 447 2379 0 4 496,314,824,223, 0,510,841,1709, +,+,+,+, 722640 Satellite W-chromosome 585 chrUn_NT_474558v1 3440 4059 GGXHOI 372 + 3440 4059 0 2 493,110, 0,509, +,+, 722642 Satellite W-chromosome 585 chrUn_NT_474559v1 3512 3750 G-rich 409 + 3512 3750 0 2 40,146, 0,92, +,+, 722645 Low_complexity Low_complexity 585 chrUn_NT_474563v1 137 685 (TTAGGG)n 662 + 137 685 0 2 216,142, 0,406, +,+, 722672 Simple_repeat Simple_repeat 585 chrUn_NT_474563v1 727 2091 (TTAGGG)n 602 + 727 2091 0 5 203,183,544,175,210, 0,221,404,979,1154, +,+,+,+,+, 722675 Simple_repeat Simple_repeat 585 chrUn_NT_474563v1 2160 3125 (TTAGGG)n 651 + 2160 3125 0 4 192,201,231,151, 0,192,393,814, +,+,+,+, 722677 Simple_repeat Simple_repeat 585 chrUn_NT_474563v1 3162 4088 (TTAGGG)n 589 + 3162 4088 0 3 184,116,416, 0,220,510, +,+,+, 722680 Simple_repeat Simple_repeat 585 chrUn_NT_474564v1 2664 2771 (C)n 596 + 2664 2771 0 2 37,32, 0,75, +,+, 722693 Simple_repeat Simple_repeat 585 chrUn_NT_474567v1 3488 4135 GGXHOI 417 - 3488 4135 0 2 555,80, 0,567, -,-, 722704 Satellite W-chromosome 585 chrUn_NT_474571v1 1354 3575 GGXHOI 380 + 1354 3575 0 2 1153,1005, 0,1216, +,+, 722735 Satellite W-chromosome 585 chrUn_NT_474573v1 1517 4588 GGXHOI 461 - 1517 4588 0 4 179,267,2035,516, 0,219,502,2555, -,-,-,-, 722743 Satellite W-chromosome 585 chrUn_NT_474576v1 690 1036 (CAAGG)n 360 + 690 1036 0 2 123,48, 0,298, +,+, 722752 Simple_repeat Simple_repeat 585 chrUn_NT_474576v1 1358 2391 (CGAGG)n 476 + 1358 2391 0 4 184,206,275,112, 0,231,463,921, +,+,+,+, 722756 Simple_repeat Simple_repeat 585 chrUn_NT_474576v1 2434 3759 (CGAGG)n 539 + 2434 3759 0 6 202,181,175,190,235,200, 0,232,430,605,858,1125, +,+,+,+,+,+, 722760 Simple_repeat Simple_repeat 585 chrUn_NT_474576v1 3836 4253 (CGAGG)n 491 + 3836 4253 0 2 176,223, 0,194, +,+, 722762 Simple_repeat Simple_repeat 585 chrUn_NT_474581v1 794 1885 GGXHOI 346 + 794 1885 0 3 132,485,416, 0,176,675, +,+,+, 722796 Satellite W-chromosome 585 chrUn_NT_474581v1 2053 2510 GGXHOI 315 + 2053 2510 0 3 126,128,135, 0,163,322, +,+,+, 722797 Satellite W-chromosome 585 chrUn_NT_474581v1 2993 4346 GGXHOI 368 + 2993 4346 0 2 297,1039, 0,314, +,+, 722799 Satellite W-chromosome 585 chrUn_NT_474584v1 1901 2534 GGXHOI 399 + 1901 2534 0 2 349,267, 0,366, +,+, 722820 Satellite W-chromosome 585 chrUn_NT_474584v1 2752 3697 GGXHOI 379 + 2752 3697 0 2 582,346, 0,599, +,+, 722821 Satellite W-chromosome 585 chrUn_NT_474584v1 3875 4579 GGXHOI 378 + 3875 4579 0 2 256,430, 0,274, +,+, 722822 Satellite W-chromosome 585 chrUn_NT_474585v1 1528 4577 GGXHOI 384 - 1528 4577 0 5 262,1635,180,679,174, 0,309,1984,2180,2875, -,-,-,-,-, 722825 Satellite W-chromosome 585 chrUn_NT_474589v1 781 1432 GGXHOI 311 + 781 1432 0 4 138,135,229,98, 0,155,306,553, +,+,+,+, 722841 Satellite W-chromosome 585 chrUn_NT_474589v1 1549 2951 GGXHOI 318 + 1549 2951 0 5 127,489,116,421,130, 0,163,701,831,1272, +,+,+,+,+, 722842 Satellite W-chromosome 585 chrUn_NT_474589v1 3516 4591 GGXHOI 432 - 3516 4591 0 5 210,135,139,57,417, 0,225,411,580,658, -,-,-,-,-, 722844 Satellite W-chromosome 585 chrUn_NT_474590v1 1118 1377 (ACCCATAGAG)n 649 + 1118 1377 0 2 121,136, 0,123, +,+, 722851 Satellite Satellite 585 chrUn_NT_474590v1 1591 1876 (ACCCATAGGG)n 554 + 1591 1876 0 2 92,12, 0,273, +,+, 722854 Satellite Satellite 585 chrUn_NT_474590v1 2388 2897 (ACCCATAGAG)n 578 + 2388 2897 0 2 232,154, 0,355, +,+, 722858 Satellite Satellite 585 chrUn_NT_474591v1 705 2783 GGXHOI 393 - 705 2783 0 4 220,674,772,362, 0,240,929,1716, -,-,-,-, 722867 Satellite W-chromosome 585 chrUn_NT_474591v1 3627 4587 GGXHOI 437 - 3627 4587 0 3 129,159,601, 0,146,359, -,-,-, 722869 Satellite W-chromosome 585 chrUn_NT_474593v1 1705 4579 GGXHOI 402 - 1705 4579 0 3 494,147,2205, 0,507,669, -,-,-, 722874 Satellite W-chromosome 585 chrUn_NT_474596v1 1664 3060 GGXHOI 425 - 1664 3060 0 2 1163,174, 0,1222, -,-, 722881 Satellite W-chromosome 585 chrUn_NT_474596v1 3512 4582 GGXHOI 361 - 3512 4582 0 2 850,201, 0,869, -,-, 722883 Satellite W-chromosome 585 chrUn_NT_474597v1 4215 4559 G-rich 455 + 4215 4559 0 2 38,250, 0,94, +,+, 722891 Low_complexity Low_complexity 585 chrUn_NT_474599v1 2802 4155 CR1-F 840 - 2802 4155 0 2 744,342, 0,1011, -,-, 722895 LINE CR1 585 chrUn_NT_474600v1 1865 3808 GGXHOI 548 + 1865 3808 0 3 591,643,19, 0,922,1924, +,+,+, 722904 Satellite W-chromosome 585 chrUn_NT_474600v1 3895 4239 GGXHOI 353 + 3895 4239 0 2 151,170, 0,174, +,+, 722907 Satellite W-chromosome 585 chrUn_NT_474603v1 2777 3059 (ACCCCATAGGG)n 612 + 2777 3059 0 2 123,34, 0,248, +,+, 722915 Satellite Satellite 585 chrUn_NT_474604v1 3891 4515 CR1-H 687 - 3891 4515 0 2 139,466, 0,158, -,-, 722925 LINE CR1 585 chrUn_NT_474608v1 819 1233 (CGAGG)n 584 + 819 1233 0 2 187,189, 0,225, +,+, 722940 Simple_repeat Simple_repeat 585 chrUn_NT_474608v1 1910 2676 (CGAGG)n 470 + 1910 2676 0 3 157,195,384, 0,172,382, +,+,+, 722944 Simple_repeat Simple_repeat 585 chrUn_NT_474608v1 3279 3660 (CGAGG)n 600 + 3279 3660 0 2 178,173, 0,208, +,+, 722950 Simple_repeat Simple_repeat 585 chrUn_NT_474608v1 3961 4324 (CGAGG)n 571 + 3961 4324 0 2 167,176, 0,187, +,+, 722952 Simple_repeat Simple_repeat 585 chrUn_NT_474613v1 1741 3421 GGXHOI 377 + 1741 3421 0 2 669,958, 0,722, +,+, 722976 Satellite W-chromosome 585 chrUn_NT_474620v1 1543 2453 GGXHOI 438 - 1543 2453 0 2 401,493, 0,417, -,-, 722993 Satellite W-chromosome 585 chrUn_NT_474620v1 2955 3449 GGXHOI 370 - 2955 3449 0 2 202,265, 0,229, -,-, 722994 Satellite W-chromosome 585 chrUn_NT_474623v1 3106 3235 G-rich 654 + 3106 3235 0 2 37,41, 0,88, +,+, 723006 Low_complexity Low_complexity 585 chrUn_NT_474624v1 2789 3182 (CCCTAA)n 514 + 2789 3182 0 2 200,175, 0,218, +,+, 723012 Simple_repeat Simple_repeat 585 chrUn_NT_474624v1 3280 4181 (CCCTAA)n 588 + 3280 4181 0 2 379,497, 0,404, +,+, 723014 Simple_repeat Simple_repeat 585 chrUn_NT_474625v1 3980 4417 GA-rich 471 + 3980 4417 0 2 227,180, 0,257, +,+, 723034 Low_complexity Low_complexity 585 chrUn_NT_474626v1 1352 1746 GGXHOI 406 - 1352 1746 0 2 194,184, 0,210, -,-, 723036 Satellite W-chromosome 585 chrUn_NT_474626v1 1846 3513 GGXHOI 360 - 1846 3513 0 3 624,346,646, 0,656,1021, -,-,-, 723037 Satellite W-chromosome 585 chrUn_NT_474626v1 3686 4532 GGXHOI 369 - 3686 4532 0 2 137,657, 0,189, -,-, 723038 Satellite W-chromosome 585 chrUn_NT_474627v1 343 1669 GGLTR12C 266 + 343 1669 0 2 268,147, 0,1179, +,+, 723040 LTR ERVL 585 chrUn_NT_474631v1 413 2698 GGXHOI 574 + 413 2698 0 4 1013,115,90,517, 0,1233,1629,1768, +,+,+,+, 723068 Satellite W-chromosome 585 chrUn_NT_474631v1 2781 3430 GGXHOI 456 + 2781 3430 0 2 46,403, 0,246, +,+, 723071 Satellite W-chromosome 585 chrUn_NT_474631v1 3497 4557 GGXHOI 441 + 3497 4557 0 3 192,349,429, 0,232,631, +,+,+, 723073 Satellite W-chromosome 585 chrUn_NT_474633v1 1125 2566 GGXHOI 387 + 1125 2566 0 3 332,424,611, 0,348,830, +,+,+, 723078 Satellite W-chromosome 585 chrUn_NT_474633v1 2651 4545 GGXHOI 367 + 2651 4545 0 3 467,906,471, 0,502,1423, +,+,+, 723079 Satellite W-chromosome 585 chrUn_NT_474635v1 516 4165 GGXHOI 434 - 516 4165 0 4 1256,1354,757,187, 0,1272,2676,3462, -,-,-,-, 723083 Satellite W-chromosome 585 chrUn_NT_474637v1 1244 3444 GGXHOI 377 - 1244 3444 0 3 1219,864,78, 0,1242,2122, -,-,-, 723088 Satellite W-chromosome 585 chrUn_NT_474638v1 339 3185 GGXHOI 415 - 339 3185 0 3 2074,315,424, 0,2095,2422, -,-,-, 723091 Satellite W-chromosome 585 chrUn_NT_474638v1 3540 4529 GGXHOI 309 - 3540 4529 0 2 490,487, 0,502, -,-, 723092 Satellite W-chromosome 585 chrUn_NT_474639v1 3079 3953 GGXHOI 357 - 3079 3953 0 2 415,416, 0,458, -,-, 723097 Satellite W-chromosome 585 chrUn_NT_474640v1 3536 4557 GGXHOI 311 + 3536 4557 0 4 293,149,269,265, 0,311,476,756, +,+,+,+, 723100 Satellite W-chromosome 585 chrUn_NT_474641v1 1123 4192 GGXHOI 434 + 1123 4192 0 4 225,1038,800,916, 0,246,1339,2153, +,+,+,+, 723103 Satellite W-chromosome 585 chrUn_NT_474643v1 950 3964 GGXHOI 368 - 950 3964 0 6 898,502,210,143,702,463, 0,915,1434,1665,1832,2551, -,-,-,-,-,-, 723108 Satellite W-chromosome 585 chrUn_NT_474644v1 2049 2894 (ACCCCATAGGG)n 414 - 2049 2894 0 2 286,536, 0,309, -,-, 723114 Satellite Satellite 585 chrUn_NT_474644v1 3374 3656 (ACCCCATAGGG)n 359 - 3374 3656 0 2 128,141, 0,141, -,-, 723116 Satellite Satellite 585 chrUn_NT_474644v1 3860 4280 (CCCCATTGGG)n 424 - 3860 4280 0 2 239,65, 0,355, -,-, 723117 Satellite Satellite 585 chrUn_NT_474648v1 3602 4552 GGXHOI 398 + 3602 4552 0 2 408,522, 0,428, +,+, 723144 Satellite W-chromosome 585 chrUn_NT_474649v1 419 1700 GGXHOI 399 - 419 1700 0 2 574,658, 0,623, -,-, 723147 Satellite W-chromosome 585 chrUn_NT_474649v1 3825 4443 GGXHOI 363 - 3825 4443 0 2 224,353, 0,265, -,-, 723155 Satellite W-chromosome 585 chrUn_NT_474651v1 477 953 (TCGCC)n 342 + 477 953 0 2 396,9, 0,467, +,+, 723164 Simple_repeat Simple_repeat 585 chrUn_NT_474651v1 2207 2973 (CCTCG)n 492 + 2207 2973 0 2 193,539, 0,227, +,+, 723169 Simple_repeat Simple_repeat 585 chrUn_NT_474655v1 3107 4549 GGERV20_I-int 897 + 3107 4549 0 2 1196,147, 0,1295, +,+, 723189 LTR ERVL 585 chrUn_NT_474658v1 2049 3434 GGLTR7-int 349 - 2049 3434 0 3 282,237,86, 0,1036,1299, -,-,-, 723205 LTR ERV1 585 chrUn_NT_474663v1 1521 1938 (CGAGG)n 510 + 1521 1938 0 2 176,181, 0,236, +,+, 723217 Simple_repeat Simple_repeat 585 chrUn_NT_474663v1 2639 3046 (CGAGG)n 478 + 2639 3046 0 2 175,175, 0,232, +,+, 723222 Simple_repeat Simple_repeat 585 chrUn_NT_474663v1 3152 3537 (CGAGG)n 525 + 3152 3537 0 2 180,169, 0,216, +,+, 723224 Simple_repeat Simple_repeat 585 chrUn_NT_474665v1 1327 1958 GGXHOI 383 - 1327 1958 0 3 290,124,170, 0,303,461, -,-,-, 723242 Satellite W-chromosome 585 chrUn_NT_474665v1 2024 4151 GGXHOI 376 - 2024 4151 0 6 99,587,280,138,555,302, 0,112,715,1041,1228,1825, -,-,-,-,-,-, 723243 Satellite W-chromosome 585 chrUn_NT_474668v1 1834 2476 GGXHOI 407 - 1834 2476 0 2 307,292, 0,350, -,-, 723249 Satellite W-chromosome 585 chrUn_NT_474668v1 2654 4540 GGXHOI 402 - 2654 4540 0 5 311,344,549,183,376, 0,329,729,1306,1510, -,-,-,-,-, 723250 Satellite W-chromosome 585 chrUn_NT_474669v1 633 2292 GGXHOI 372 - 633 2292 0 2 512,1084, 0,575, -,-, 723252 Satellite W-chromosome 585 chrUn_NT_474670v1 359 693 (ACCCATAGGG)n 670 - 359 693 0 2 144,73, 0,261, -,-, 723258 Satellite Satellite 585 chrUn_NT_474670v1 787 1121 (ACCCATAGGG)n 682 - 787 1121 0 2 144,73, 0,261, -,-, 723260 Satellite Satellite 585 chrUn_NT_474670v1 1228 1648 (ACCCATAGGG)n 697 - 1228 1648 0 3 130,40,118, 0,250,302, -,-,-, 723262 Satellite Satellite 585 chrUn_NT_474670v1 1358 1531 (ACCCATAGAG)n 602 - 1358 1531 0 2 120,53, 0,120, -,-, 723263 Satellite Satellite 585 chrUn_NT_474670v1 1900 2109 (CTCTATGGGG)n 538 + 1900 2109 0 2 70,19, 0,190, +,+, 723265 Satellite Satellite 585 chrUn_NT_474671v1 1731 2624 GGXHOI 353 - 1731 2624 0 2 341,512, 0,381, -,-, 723271 Satellite W-chromosome 585 chrUn_NT_474671v1 2688 4375 GGXHOI 400 - 2688 4375 0 3 664,690,301, 0,681,1386, -,-,-, 723272 Satellite W-chromosome 585 chrUn_NT_474672v1 2066 2380 (CTCTATGGGG)n 548 - 2066 2380 0 2 111,92, 0,222, -,-, 723275 Satellite Satellite 585 chrUn_NT_474672v1 2687 2946 (CTCTATGGGG)n 601 - 2687 2946 0 2 109,108, 0,151, -,-, 723278 Satellite Satellite 585 chrUn_NT_474673v1 3582 4389 (CCTTG)n 465 + 3582 4389 0 4 160,126,83,188, 0,193,493,619, +,+,+,+, 723293 Simple_repeat Simple_repeat 585 chrUn_NT_474675v1 335 750 (CTCTATGGGG)n 488 - 335 750 0 2 154,101, 0,314, -,-, 723299 Satellite Satellite 585 chrUn_NT_474675v1 1258 1547 (ACCCCATAGGG)n 455 + 1258 1547 0 2 124,165, 0,124, +,+, 723304 Satellite Satellite 585 chrUn_NT_474675v1 1842 2352 (ACCCCATAGGG)n 361 + 1842 2352 0 3 135,131,169, 0,180,341, +,+,+, 723307 Satellite Satellite 585 chrUn_NT_474675v1 2935 3229 (CTCTATGGGG)n 480 - 2935 3229 0 2 154,15, 0,279, -,-, 723310 Satellite Satellite 585 chrUn_NT_474675v1 3331 3609 (ACCCCATAGGG)n 516 - 3331 3609 0 2 95,63, 0,215, -,-, 723312 Satellite Satellite 585 chrUn_NT_474675v1 3984 4340 (CTCTATGGGG)n 472 + 3984 4340 0 2 105,18, 0,338, +,+, 723314 Satellite Satellite 585 chrUn_NT_474676v1 673 921 (CTCTATGGGG)n 632 - 673 921 0 2 94,18, 0,230, -,-, 723322 Satellite Satellite 585 chrUn_NT_474681v1 1642 2039 GGXHOI 392 - 1642 2039 0 3 137,135,98, 0,152,299, -,-,-, 723360 Satellite W-chromosome 585 chrUn_NT_474681v1 2134 4497 GGXHOI 373 - 2134 4497 0 2 1665,682, 0,1681, -,-, 723361 Satellite W-chromosome 585 chrUn_NT_474682v1 3134 4522 GGXHOI 343 - 3134 4522 0 3 309,641,362, 0,332,1026, -,-,-, 723363 Satellite W-chromosome 585 chrUn_NT_474684v1 1585 3930 GGXHOI 383 + 1585 3930 0 3 1564,266,418, 0,1611,1927, +,+,+, 723381 Satellite W-chromosome 585 chrUn_NT_474684v1 4087 4522 GGXHOI 308 + 4087 4522 0 2 198,220, 0,215, +,+, 723382 Satellite W-chromosome 585 chrUn_NT_474690v1 2760 4494 GGXHOI 325 - 2760 4494 0 2 226,1490, 0,244, -,-, 723426 Satellite W-chromosome 585 chrUn_NT_474693v1 182 2429 GGLTR7-int 484 + 182 2429 0 2 315,706, 0,1541, +,+, 723444 LTR ERV1 585 chrUn_NT_474693v1 398 1724 Z-REP 415 - 398 1724 0 2 148,857, 0,469, -,-, 723445 Satellite macro 585 chrUn_NT_474693v1 2601 4519 GGLTR10C-int 853 - 2601 4519 0 3 359,93,1413, 0,362,505, -,-,-, 723446 LTR ERVK 585 chrUn_NT_474694v1 256 2057 (CAAGG)n 629 + 256 2057 0 7 169,20,129,259,206,73,174, 0,346,392,707,977,1536,1627, +,+,+,+,+,+,+, 723449 Simple_repeat Simple_repeat 585 chrUn_NT_474694v1 1439 1792 (CAAGA)n 378 + 1439 1792 0 2 129,46, 0,307, +,+, 723452 Simple_repeat Simple_repeat 585 chrUn_NT_474694v1 2231 3949 (CAAGG)n 596 + 2231 3949 0 5 266,156,16,25,375, 0,433,763,1139,1343, +,+,+,+,+, 723456 Simple_repeat Simple_repeat 585 chrUn_NT_474699v1 1593 2176 ENS1B-LTR 587 - 1593 2176 0 3 56,107,420, 0,56,163, -,-,-, 723475 LTR ERVL 585 chrUn_NT_474701v1 1634 4506 GGXHOI 442 - 1634 4506 0 3 156,1086,1601, 0,170,1271, -,-,-, 723500 Satellite W-chromosome 585 chrUn_NT_474703v1 707 2810 GGXHOI 378 + 707 2810 0 5 489,514,335,155,430, 0,533,1082,1465,1673, +,+,+,+,+, 723503 Satellite W-chromosome 585 chrUn_NT_474710v1 1110 4486 GGXHOI 459 - 1110 4486 0 3 1663,152,1538, 0,1675,1838, -,-,-, 723536 Satellite W-chromosome 585 chrUn_NT_474712v1 929 3833 GGXHOI 425 + 929 3833 0 4 1668,313,556,259, 0,1725,2076,2645, +,+,+,+, 723541 Satellite W-chromosome 585 chrUn_NT_474713v1 3333 4342 GGXHOI 369 + 3333 4342 0 3 269,567,100, 0,322,909, +,+,+, 723546 Satellite W-chromosome 585 chrUn_NT_474719v1 891 1011 G-rich 566 + 891 1011 0 2 55,29, 0,91, +,+, 723573 Low_complexity Low_complexity 585 chrUn_NT_474720v1 2108 3469 (GCCCCACAGCT)n 395 - 2108 3469 0 9 106,105,103,100,105,113,96,113,92, 0,159,317,477,627,784,955,1103,1269, -,-,-,-,-,-,-,-,-, 723582 Satellite Satellite 585 chrUn_NT_474720v1 3805 4219 (GCCCCACAGCT)n 379 - 3805 4219 0 3 100,112,101, 0,148,313, -,-,-, 723585 Satellite Satellite 585 chrUn_NT_474722v1 3718 4488 GGXHOI 363 - 3718 4488 0 2 531,226, 0,544, -,-, 723593 Satellite W-chromosome 585 chrUn_NT_474724v1 3380 4484 GGXHOI 410 - 3380 4484 0 2 948,143, 0,961, -,-, 723598 Satellite W-chromosome 585 chrUn_NT_474726v1 1852 4233 GGXHOI 444 + 1852 4233 0 4 683,274,648,729, 0,698,988,1652, +,+,+,+, 723606 Satellite W-chromosome 585 chrUn_NT_474727v1 3990 4384 GGXHOI 479 + 3990 4384 0 2 156,217, 0,177, +,+, 723611 Satellite W-chromosome 585 chrUn_NT_474730v1 188 906 (CCCCATTGGG)n 434 + 188 906 0 5 171,108,108,108,108, 0,225,350,485,610, +,+,+,+,+, 723634 Satellite Satellite 585 chrUn_NT_474730v1 2515 2807 (CTCTATGGGG)n 577 + 2515 2807 0 2 119,117, 0,175, +,+, 723639 Satellite Satellite 585 chrUn_NT_474730v1 3118 3532 (CTCTATGGGG)n 526 + 3118 3532 0 3 116,121,119, 0,149,295, +,+,+, 723640 Satellite Satellite 585 chrUn_NT_474731v1 2322 3512 (CCCTAA)n 654 + 2322 3512 0 2 227,795, 0,395, +,+, 723649 Simple_repeat Simple_repeat 585 chrUn_NT_474731v1 4090 4467 (CCCTAA)n 576 + 4090 4467 0 2 176,170, 0,207, +,+, 723656 Simple_repeat Simple_repeat 585 chrUn_NT_474732v1 586 1332 (ACCCATAGGG)n 683 + 586 1332 0 4 146,271,118,54, 0,194,515,692, +,+,+,+, 723659 Satellite Satellite 585 chrUn_NT_474732v1 1606 1914 (ACCCATTGGG)n 671 + 1606 1914 0 2 163,106, 0,202, +,+, 723662 Satellite Satellite 585 chrUn_NT_474732v1 1954 2802 (ACCCATAGGG)n 656 + 1954 2802 0 4 270,116,160,206, 0,321,481,642, +,+,+,+, 723663 Satellite Satellite 585 chrUn_NT_474732v1 3631 4244 (ACCCATAGGG)n 584 + 3631 4244 0 2 359,254, 0,359, +,+, 723669 Satellite Satellite 585 chrUn_NT_474736v1 1145 2973 GGXHOI 381 + 1145 2973 0 3 204,1236,274, 0,260,1554, +,+,+, 723676 Satellite W-chromosome 585 chrUn_NT_474739v1 4100 4196 CR1-E 652 + 4100 4196 0 2 50,46, 0,50, +,+, 723684 LINE CR1 585 chrUn_NT_474740v1 507 1019 (CTCTATGGGG)n 676 - 507 1019 0 2 122,378, 0,134, -,-, 723687 Satellite Satellite 585 chrUn_NT_474740v1 1080 1385 (CTCTATGGGG)n 658 + 1080 1385 0 2 151,154, 0,151, +,+, 723689 Satellite Satellite 585 chrUn_NT_474740v1 1472 1835 (CTCTATGGGG)n 686 - 1472 1835 0 2 162,80, 0,283, -,-, 723691 Satellite Satellite 585 chrUn_NT_474740v1 1796 2945 (CTCTATGGGG)n 638 + 1796 2945 0 5 294,132,176,262,169, 0,294,426,602,980, +,+,+,+,+, 723693 Satellite Satellite 585 chrUn_NT_474740v1 2998 3249 (CTCTATGGGG)n 646 - 2998 3249 0 2 119,120, 0,131, -,-, 723695 Satellite Satellite 585 chrUn_NT_474740v1 3242 3723 (CTCTATGGGG)n 661 + 3242 3723 0 3 183,167,131, 0,183,350, +,+,+, 723696 Satellite Satellite 585 chrUn_NT_474742v1 721 1050 (ACCCATAGGG)n 598 + 721 1050 0 2 145,184, 0,145, +,+, 723721 Satellite Satellite 585 chrUn_NT_474742v1 3291 3613 (GCCCCACAGCT)n 587 - 3291 3613 0 2 136,131, 0,191, -,-, 723727 Satellite Satellite 585 chrUn_NT_474744v1 1625 3283 (TTAGGG)n 649 + 1625 3283 0 5 181,190,263,94,555, 0,215,417,833,1103, +,+,+,+,+, 723743 Simple_repeat Simple_repeat 585 chrUn_NT_474744v1 3796 4429 (TTAGGG)n 606 + 3796 4429 0 3 199,181,186, 0,255,447, +,+,+, 723749 Simple_repeat Simple_repeat 585 chrUn_NT_474750v1 91 365 (CTCCCT)n 358 + 91 365 0 2 183,41, 0,233, +,+, 723789 Simple_repeat Simple_repeat 585 chrUn_NT_474751v1 2788 3407 CR1-H 674 - 2788 3407 0 2 139,474, 0,145, -,-, 723798 LINE CR1 585 chrUn_NT_474757v1 885 3952 GGXHOI 415 - 885 3952 0 4 1127,113,786,898, 0,1179,1340,2169, -,-,-,-, 723850 Satellite W-chromosome 585 chrUn_NT_474758v1 430 4452 GGXHOI 542 + 430 4452 0 6 309,837,297,223,254,455, 0,509,1669,2363,2867,3567, +,+,+,+,+,+, 723853 Satellite W-chromosome 585 chrUn_NT_474761v1 724 1688 (CCTTG)n 629 + 724 1688 0 3 108,44,584, 0,316,380, +,+,+, 723866 Simple_repeat Simple_repeat 585 chrUn_NT_474761v1 1669 2067 (CCTTG)n 586 + 1669 2067 0 2 174,47, 0,351, +,+, 723869 Simple_repeat Simple_repeat 585 chrUn_NT_474761v1 2061 2370 (GCCTG)n 474 + 2061 2370 0 2 97,28, 0,281, +,+, 723871 Simple_repeat Simple_repeat 585 chrUn_NT_474761v1 2382 4347 (CCTTG)n 599 + 2382 4347 0 6 403,423,46,166,68,367, 0,423,1082,1176,1518,1598, +,+,+,+,+,+, 723873 Simple_repeat Simple_repeat 585 chrUn_NT_474762v1 2379 4437 GGXHOI 439 - 2379 4437 0 3 573,1099,350, 0,593,1708, -,-,-, 723879 Satellite W-chromosome 585 chrUn_NT_474764v1 3641 4445 GGXHOI 493 - 3641 4445 0 3 89,289,396, 0,100,408, -,-,-, 723883 Satellite W-chromosome 585 chrUn_NT_474765v1 2774 4445 GGXHOI 333 - 2774 4445 0 3 137,814,645, 0,155,1026, -,-,-, 723887 Satellite W-chromosome 585 chrUn_NT_474766v1 2703 2990 (ACCCCATAGGG)n 473 + 2703 2990 0 2 120,145, 0,142, +,+, 723891 Satellite Satellite 585 chrUn_NT_474766v1 3277 3576 (ACCCCATAGGG)n 446 + 3277 3576 0 2 128,146, 0,153, +,+, 723892 Satellite Satellite 585 chrUn_NT_474766v1 3916 4342 (ACCCCATAGGG)n 467 + 3916 4342 0 3 147,108,131, 0,161,295, +,+,+, 723893 Satellite Satellite 585 chrUn_NT_474768v1 3364 3511 (T)n 912 + 3364 3511 0 2 48,42, 0,105, +,+, 723906 Simple_repeat Simple_repeat 585 chrUn_NT_474768v1 4359 4428 (G)n 832 + 4359 4428 0 2 26,24, 0,45, +,+, 723911 Simple_repeat Simple_repeat 585 chrUn_NT_474771v1 105 489 (CGAGG)n 523 + 105 489 0 2 173,174, 0,210, +,+, 723918 Simple_repeat Simple_repeat 585 chrUn_NT_474771v1 1010 1928 (CGAGG)n 538 + 1010 1928 0 2 647,242, 0,676, +,+, 723922 Simple_repeat Simple_repeat 585 chrUn_NT_474771v1 2902 3385 (CGAGG)n 504 + 2902 3385 0 2 286,182, 0,301, +,+, 723925 Simple_repeat Simple_repeat 585 chrUn_NT_474771v1 4042 4423 (CGAGG)n 454 + 4042 4423 0 2 184,181, 0,200, +,+, 723929 Simple_repeat Simple_repeat 585 chrUn_NT_474773v1 1531 4066 GGXHOI 381 + 1531 4066 0 2 1888,607, 0,1928, +,+, 723940 Satellite W-chromosome 585 chrUn_NT_474774v1 643 2263 GGXHOI 377 - 643 2263 0 2 392,1170, 0,450, -,-, 723943 Satellite W-chromosome 585 chrUn_NT_474774v1 3112 3994 GGXHOI 295 - 3112 3994 0 2 583,281, 0,601, -,-, 723945 Satellite W-chromosome 585 chrUn_NT_474775v1 311 3908 GGXHOI 379 - 311 3908 0 5 1610,372,225,422,865, 0,1665,2055,2295,2732, -,-,-,-,-, 723948 Satellite W-chromosome 585 chrUn_NT_474775v1 4025 4426 GGXHOI 386 - 4025 4426 0 2 255,129, 0,272, -,-, 723949 Satellite W-chromosome 585 chrUn_NT_474776v1 112 3427 GGXHOI 489 + 112 3427 0 4 350,683,341,701, 0,390,1646,2614, +,+,+,+, 723951 Satellite W-chromosome 585 chrUn_NT_474776v1 3510 4443 GGXHOI 482 + 3510 4443 0 2 447,76, 0,857, +,+, 723954 Satellite W-chromosome 585 chrUn_NT_474778v1 379 997 (CAAGG)n 449 + 379 997 0 2 163,442, 0,176, +,+, 723969 Simple_repeat Simple_repeat 585 chrUn_NT_474778v1 1500 1860 (CCTTG)n 542 + 1500 1860 0 2 131,52, 0,308, +,+, 723972 Simple_repeat Simple_repeat 585 chrUn_NT_474778v1 2236 2598 (CCTTG)n 447 + 2236 2598 0 2 187,163, 0,199, +,+, 723976 Simple_repeat Simple_repeat 585 chrUn_NT_474778v1 3495 3873 (CAAGG)n 527 + 3495 3873 0 2 183,195, 0,183, +,+, 723982 Simple_repeat Simple_repeat 585 chrUn_NT_474778v1 4111 4440 (CCTTG)n 509 + 4111 4440 0 2 182,129, 0,200, +,+, 723984 Simple_repeat Simple_repeat 585 chrUn_NT_474779v1 682 3030 GGXHOI 391 - 682 3030 0 3 323,529,1438, 0,338,910, -,-,-, 723986 Satellite W-chromosome 585 chrUn_NT_474779v1 3105 4439 GGXHOI 384 - 3105 4439 0 5 144,436,320,162,170, 0,161,646,982,1164, -,-,-,-,-, 723987 Satellite W-chromosome 585 chrUn_NT_474783v1 937 2993 GGXHOI 465 + 937 2993 0 2 1860,181, 0,1875, +,+, 723998 Satellite W-chromosome 585 chrUn_NT_474786v1 2129 3338 GGXHOI 355 + 2129 3338 0 2 280,900, 0,309, +,+, 724013 Satellite W-chromosome 585 chrUn_NT_474786v1 3412 4432 GGXHOI 367 + 3412 4432 0 4 149,159,349,314, 0,166,337,706, +,+,+,+, 724014 Satellite W-chromosome 585 chrUn_NT_474787v1 1014 4425 Sat-CR1_GG 160 - 1014 4425 0 2 2487,761, 0,2650, -,-, 724017 Satellite Satellite 585 chrUn_NT_474788v1 1247 1775 Sat-CR1_GG 160 - 1247 1775 0 2 123,164, 0,364, -,-, 724025 Satellite Satellite 585 chrUn_NT_474789v1 735 1137 (CGAGG)n 557 + 735 1137 0 2 183,186, 0,216, +,+, 724041 Simple_repeat Simple_repeat 585 chrUn_NT_474789v1 1273 1666 (CGAGG)n 588 + 1273 1666 0 2 180,178, 0,215, +,+, 724042 Simple_repeat Simple_repeat 585 chrUn_NT_474789v1 1756 2848 (CGAGG)n 555 + 1756 2848 0 3 91,593,173, 0,263,919, +,+,+, 724044 Simple_repeat Simple_repeat 585 chrUn_NT_474789v1 3530 4410 (CGAGG)n 563 + 3530 4410 0 3 181,249,374, 0,203,506, +,+,+, 724048 Simple_repeat Simple_repeat 585 chrUn_NT_474790v1 1477 3903 GGXHOI 441 - 1477 3903 0 3 1119,825,402, 0,1157,2024, -,-,-, 724050 Satellite W-chromosome 585 chrUn_NT_474793v1 1837 3031 (CAAGG)n 655 + 1837 3031 0 5 192,179,37,541,200, 0,210,404,453,994, +,+,+,+,+, 724078 Simple_repeat Simple_repeat 585 chrUn_NT_474793v1 3107 4423 (CAAGG)n 624 + 3107 4423 0 4 221,193,594,89, 0,221,457,1227, +,+,+,+, 724080 Simple_repeat Simple_repeat 585 chrUn_NT_474794v1 1691 2818 CR1-F2 879 - 1691 2818 0 2 474,653, 0,474, -,-, 724085 LINE CR1 585 chrUn_NT_474795v1 2768 3337 Sat-CR1_GG 186 + 2768 3337 0 2 172,157, 0,412, +,+, 724098 Satellite Satellite 585 chrUn_NT_474797v1 2325 4404 GGXHOI 526 + 2325 4404 0 4 236,57,162,76, 0,277,1661,2003, +,+,+,+, 724108 Satellite W-chromosome 585 chrUn_NT_474798v1 32 983 GGXHOI 335 + 32 983 0 2 131,790, 0,161, +,+, 724112 Satellite W-chromosome 585 chrUn_NT_474798v1 2953 4425 GGXHOI 380 - 2953 4425 0 3 142,858,447, 0,155,1025, -,-,-, 724117 Satellite W-chromosome 585 chrUn_NT_474800v1 684 2510 GGXHOI 359 + 684 2510 0 2 580,1229, 0,597, +,+, 724119 Satellite W-chromosome 585 chrUn_NT_474800v1 3103 4027 GGXHOI 383 + 3103 4027 0 2 557,350, 0,574, +,+, 724121 Satellite W-chromosome 585 chrUn_NT_474802v1 161 1407 CR1-H 562 - 161 1407 0 2 112,1134, 0,112, -,-, 724129 LINE CR1 585 chrUn_NT_474806v1 1534 1684 (CCCTT)n 276 + 1534 1684 0 2 7,63, 0,87, +,+, 724142 Simple_repeat Simple_repeat 585 chrUn_NT_474806v1 1541 1621 (CCCT)n 284 + 1541 1621 0 2 41,20, 0,60, +,+, 724143 Simple_repeat Simple_repeat 585 chrUn_NT_474808v1 550 1463 GGXHOI 390 + 550 1463 0 2 358,511, 0,402, +,+, 724157 Satellite W-chromosome 585 chrUn_NT_474808v1 2356 3619 GGXHOI 375 + 2356 3619 0 3 264,805,128, 0,278,1135, +,+,+, 724158 Satellite W-chromosome 585 chrUn_NT_474809v1 3412 4081 GGXHOI 425 + 3412 4081 0 3 277,140,221, 0,293,448, +,+,+, 724163 Satellite W-chromosome 585 chrUn_NT_474811v1 417 1727 GGXHOI 376 + 417 1727 0 3 968,142,139, 0,985,1171, +,+,+, 724167 Satellite W-chromosome 585 chrUn_NT_474812v1 1037 1696 GGXHOI 402 - 1037 1696 0 3 258,181,135, 0,296,524, -,-,-, 724171 Satellite W-chromosome 585 chrUn_NT_474812v1 1767 3962 GGXHOI 434 - 1767 3962 0 8 138,366,106,171,184,144,516,288, 0,184,569,723,911,1145,1331,1907, -,-,-,-,-,-,-,-, 724172 Satellite W-chromosome 585 chrUn_NT_474813v1 435 4410 GGXHOI 398 + 435 4410 0 8 474,885,712,355,267,453,363,326, 0,490,1391,2119,2490,2768,3272,3649, +,+,+,+,+,+,+,+, 724175 Satellite W-chromosome 585 chrUn_NT_474814v1 625 2622 GGXHOI 411 - 625 2622 0 4 234,480,548,675, 0,253,749,1322, -,-,-,-, 724177 Satellite W-chromosome 585 chrUn_NT_474818v1 1147 1983 (GCCCCACAGCT)n 490 . 1147 1983 0 4 150,37,63,382, 0,281,343,454, -,-,+,+, 724211 Satellite Satellite 585 chrUn_NT_474819v1 3221 4172 GGXHOI 394 + 3221 4172 0 2 460,428, 0,523, +,+, 724218 Satellite W-chromosome 585 chrUn_NT_474820v1 3131 4397 GGERVL-B-int 669 + 3131 4397 0 3 308,76,506, 0,663,760, +,+,+, 724228 LTR ERVL 585 chrUn_NT_474823v1 794 1741 (TTAGGG)n 568 + 794 1741 0 3 163,317,249, 0,179,698, +,+,+, 724244 Simple_repeat Simple_repeat 585 chrUn_NT_474823v1 1836 2218 (TTAGGG)n 664 + 1836 2218 0 2 119,77, 0,305, +,+, 724247 Simple_repeat Simple_repeat 585 chrUn_NT_474823v1 2297 3375 (TTAGGG)n 607 + 2297 3375 0 3 135,102,612, 0,332,466, +,+,+, 724250 Simple_repeat Simple_repeat 585 chrUn_NT_474824v1 3643 4105 (ACCCATAGAG)n 624 + 3643 4105 0 2 170,31, 0,431, +,+, 724258 Satellite Satellite 585 chrUn_NT_474827v1 1117 2187 (CGAGG)n 494 + 1117 2187 0 5 180,182,179,177,178, 0,230,466,656,892, +,+,+,+,+, 724275 Simple_repeat Simple_repeat 585 chrUn_NT_474830v1 1449 3231 GGXHOI 356 + 1449 3231 0 2 327,1442, 0,340, +,+, 724309 Satellite W-chromosome 585 chrUn_NT_474834v1 1678 3752 GGXHOI 316 - 1678 3752 0 3 269,1407,308, 0,319,1766, -,-,-, 724326 Satellite W-chromosome 585 chrUn_NT_474835v1 759 1254 CR1-H 512 - 759 1254 0 2 77,51, 0,444, -,-, 724329 LINE CR1 585 chrUn_NT_474837v1 373 1325 GGXHOI 382 + 373 1325 0 2 426,469, 0,483, +,+, 724339 Satellite W-chromosome 585 chrUn_NT_474838v1 2502 2879 (CTCTATGGGG)n 288 - 2502 2879 0 2 214,130, 0,247, -,-, 724350 Satellite Satellite 585 chrUn_NT_474838v1 3144 3398 (CTCTATGGGG)n 434 - 3144 3398 0 2 96,38, 0,216, -,-, 724352 Satellite Satellite 585 chrUn_NT_474839v1 2785 3258 GGXHOI 249 - 2785 3258 0 2 310,151, 0,322, -,-, 724358 Satellite W-chromosome 585 chrUn_NT_474839v1 3354 4359 GGXHOI 336 - 3354 4359 0 2 596,372, 0,633, -,-, 724359 Satellite W-chromosome 585 chrUn_NT_474842v1 3380 3717 (ACCCCATAGGG)n 267 - 3380 3717 0 2 122,200, 0,137, -,-, 724391 Satellite Satellite 585 chrUn_NT_474843v1 3292 3736 CR1-H 568 - 3292 3736 0 2 163,281, 0,163, -,-, 724396 LINE CR1 585 chrUn_NT_474844v1 1630 2679 GGXHOI 365 + 1630 2679 0 3 386,433,178, 0,424,871, +,+,+, 724398 Satellite W-chromosome 585 chrUn_NT_474845v1 977 2935 GGXHOI 318 - 977 2935 0 6 229,137,698,205,443,159, 0,267,416,1126,1344,1799, -,-,-,-,-,-, 724402 Satellite W-chromosome 585 chrUn_NT_474845v1 3042 4364 GGXHOI 391 - 3042 4364 0 2 838,443, 0,879, -,-, 724403 Satellite W-chromosome 585 chrUn_NT_474849v1 1677 4359 GGXHOI 353 - 1677 4359 0 4 703,1153,127,656, 0,716,1881,2026, -,-,-,-, 724429 Satellite W-chromosome 585 chrUn_NT_474851v1 3074 3995 CR1-F 520 - 3074 3995 0 3 108,191,200, 0,230,721, -,-,-, 724443 LINE CR1 585 chrUn_NT_474852v1 2497 3688 GGXHOI 386 + 2497 3688 0 3 109,357,649, 0,132,542, +,+,+, 724450 Satellite W-chromosome 585 chrUn_NT_474853v1 988 1367 (CTCTATGGGG)n 541 + 988 1367 0 3 115,109,109, 0,137,270, +,+,+, 724453 Satellite Satellite 585 chrUn_NT_474853v1 1783 2489 (CTCTATGGGG)n 582 + 1783 2489 0 4 120,109,277,68, 0,165,337,638, +,+,+,+, 724456 Satellite Satellite 585 chrUn_NT_474853v1 2726 3011 (CTCTATGGGG)n 393 + 2726 3011 0 2 124,138, 0,147, +,+, 724458 Satellite Satellite 585 chrUn_NT_474854v1 2227 2423 A-rich 333 + 2227 2423 0 2 37,98, 0,98, +,+, 724475 Low_complexity Low_complexity 585 chrUn_NT_474855v1 3475 4092 CR1-H 653 + 3475 4092 0 2 465,137, 0,480, +,+, 724487 LINE CR1 585 chrUn_NT_474856v1 551 1632 GGLTR12C 626 - 551 1632 0 2 66,120, 0,961, -,-, 724490 LTR ERVL 585 chrUn_NT_474856v1 1992 2254 GGLTR12C 454 - 1992 2254 0 2 129,129, 0,133, -,-, 724494 LTR ERVL 585 chrUn_NT_474856v1 3143 3490 GGLTR12C 443 - 3143 3490 0 2 210,132, 0,215, -,-, 724500 LTR ERVL 585 chrUn_NT_474857v1 860 1793 GGXHOI 363 - 860 1793 0 2 598,273, 0,660, -,-, 724507 Satellite W-chromosome 585 chrUn_NT_474857v1 1931 2950 GGXHOI 334 - 1931 2950 0 2 863,135, 0,884, -,-, 724508 Satellite W-chromosome 585 chrUn_NT_474857v1 3257 4006 GGXHOI 404 - 3257 4006 0 2 186,510, 0,239, -,-, 724510 Satellite W-chromosome 585 chrUn_NT_474862v1 1606 2603 GGXHOI 394 - 1606 2603 0 2 726,228, 0,769, -,-, 724538 Satellite W-chromosome 585 chrUn_NT_474862v1 2670 4365 GGXHOI 349 - 2670 4365 0 3 508,997,134, 0,528,1561, -,-,-, 724539 Satellite W-chromosome 585 chrUn_NT_474864v1 2451 4360 GGXHOI 272 - 2451 4360 0 4 118,246,833,658, 0,139,401,1251, -,-,-,-, 724557 Satellite W-chromosome 585 chrUn_NT_474865v1 1096 4320 GGXHOI 385 - 1096 4320 0 3 1995,576,620, 0,2010,2604, -,-,-, 724560 Satellite W-chromosome 585 chrUn_NT_474866v1 568 1643 GGXHOI 369 + 568 1643 0 2 752,304, 0,771, +,+, 724562 Satellite W-chromosome 585 chrUn_NT_474866v1 1960 3316 GGXHOI 403 + 1960 3316 0 3 619,528,148, 0,633,1208, +,+,+, 724564 Satellite W-chromosome 585 chrUn_NT_474867v1 3477 4328 GGXHOI 435 - 3477 4328 0 2 293,511, 0,340, -,-, 724569 Satellite W-chromosome 585 chrUn_NT_474869v1 540 1001 (ACCCCATAGGG)n 396 - 540 1001 0 3 102,121,128, 0,153,333, -,-,-, 724576 Satellite Satellite 585 chrUn_NT_474869v1 1065 1489 (ACCCCATAGGG)n 455 - 1065 1489 0 3 111,115,101, 0,157,323, -,-,-, 724577 Satellite Satellite 585 chrUn_NT_474869v1 2460 4096 (ACCCCATAGGG)n 484 - 2460 4096 0 10 111,111,111,111,132,101,112,111,101,112, 0,173,346,519,692,887,1038,1200,1373,1524, -,-,-,-,-,-,-,-,-,-, 724580 Satellite Satellite 585 chrUn_NT_474870v1 382 3508 GGERV10_LTR 902 + 382 3508 0 2 2911,213, 0,2913, +,+, 724583 LTR ERVL 585 chrUn_NT_474872v1 1126 4349 (CCCTAA)n 633 + 1126 4349 0 8 556,171,208,109,195,226,327,543, 0,598,790,1228,1375,1593,1996,2680, +,+,+,+,+,+,+,+, 724598 Simple_repeat Simple_repeat 585 chrUn_NT_474872v1 3449 3806 (CCCTAG)n 450 + 3449 3806 0 2 91,89, 0,268, +,+, 724601 Simple_repeat Simple_repeat 585 chrUn_NT_474873v1 1944 2366 GGLTR7A 893 - 1944 2366 0 2 248,174, 0,248, -,-, 724605 LTR ERV1 585 chrUn_NT_474873v1 3842 4355 (CAAGG)n 534 + 3842 4355 0 2 101,234, 0,279, +,+, 724613 Simple_repeat Simple_repeat 585 chrUn_NT_474874v1 1904 2939 GGXHOI 364 - 1904 2939 0 4 178,185,301,274, 0,218,421,761, -,-,-,-, 724616 Satellite W-chromosome 585 chrUn_NT_474874v1 3012 4342 GGXHOI 396 - 3012 4342 0 5 207,67,127,532,333, 0,219,301,443,997, -,-,-,-,-, 724617 Satellite W-chromosome 585 chrUn_NT_474876v1 4083 4271 A-rich 394 + 4083 4271 0 2 37,92, 0,96, +,+, 724632 Low_complexity Low_complexity 585 chrUn_NT_474877v1 308 1361 (CGAGG)n 469 + 308 1361 0 3 353,493,180, 0,369,873, +,+,+, 724636 Simple_repeat Simple_repeat 585 chrUn_NT_474877v1 3848 4352 (CGAGG)n 435 + 3848 4352 0 2 339,154, 0,350, +,+, 724645 Simple_repeat Simple_repeat 585 chrUn_NT_474878v1 2623 4339 GGXHOI 361 - 2623 4339 0 5 327,265,376,459,178, 0,343,651,1065,1538, -,-,-,-,-, 724647 Satellite W-chromosome 585 chrUn_NT_474879v1 2143 3488 GGXHOI 396 - 2143 3488 0 4 392,354,140,362, 0,406,801,983, -,-,-,-, 724649 Satellite W-chromosome 585 chrUn_NT_474881v1 973 1588 (TTAGGG)n 572 + 973 1588 0 3 201,170,190, 0,231,425, +,+,+, 724654 Simple_repeat Simple_repeat 585 chrUn_NT_474881v1 1652 2790 (TTAGGG)n 614 + 1652 2790 0 3 394,522,172, 0,429,966, +,+,+, 724656 Simple_repeat Simple_repeat 585 chrUn_NT_474881v1 2831 4336 (TTAGGG)n 599 + 2831 4336 0 6 268,61,170,176,347,185, 0,461,552,747,945,1320, +,+,+,+,+,+, 724658 Simple_repeat Simple_repeat 585 chrUn_NT_474887v1 980 4339 GGXHOI 361 - 980 4339 0 2 2743,597, 0,2762, -,-, 724679 Satellite W-chromosome 585 chrUn_NT_474891v1 1741 4342 GGXHOI 571 - 1741 4342 0 5 196,260,228,256,240, 0,716,1576,2056,2361, -,-,-,-,-, 724696 Satellite W-chromosome 585 chrUn_NT_474893v1 3746 3889 (CCCATT)n 773 + 3746 3889 0 2 51,60, 0,83, +,+, 724710 Simple_repeat Simple_repeat 585 chrUn_NT_474894v1 2733 4335 GGXHOI 389 + 2733 4335 0 2 1390,198, 0,1404, +,+, 724718 Satellite W-chromosome 585 chrUn_NT_474895v1 2666 4342 GGXHOI 427 - 2666 4342 0 2 140,1501, 0,175, -,-, 724720 Satellite W-chromosome 585 chrUn_NT_474900v1 1055 2014 GGXHOI 387 - 1055 2014 0 3 446,156,304, 0,488,655, -,-,-, 724761 Satellite W-chromosome 585 chrUn_NT_474900v1 2112 2855 GGXHOI 376 - 2112 2855 0 2 359,331, 0,412, -,-, 724762 Satellite W-chromosome 585 chrUn_NT_474900v1 3020 4297 GGXHOI 367 - 3020 4297 0 2 826,399, 0,878, -,-, 724763 Satellite W-chromosome 585 chrUn_NT_474901v1 3256 4330 GGXHOI 361 - 3256 4330 0 2 266,750, 0,324, -,-, 724768 Satellite W-chromosome 585 chrUn_NT_474903v1 911 3443 GGXHOI 418 - 911 3443 0 6 317,393,428,683,478,147, 0,336,748,1188,1890,2385, -,-,-,-,-,-, 724774 Satellite W-chromosome 585 chrUn_NT_474903v1 3579 4337 GGXHOI 407 - 3579 4337 0 2 269,470, 0,288, -,-, 724775 Satellite W-chromosome 585 chrUn_NT_474904v1 1846 2772 GGXHOI 328 - 1846 2772 0 2 189,686, 0,240, -,-, 724779 Satellite W-chromosome 585 chrUn_NT_474904v1 2874 3205 GGXHOI 411 - 2874 3205 0 2 105,211, 0,120, -,-, 724780 Satellite W-chromosome 585 chrUn_NT_474904v1 3269 4341 GGXHOI 411 - 3269 4341 0 2 569,487, 0,585, -,-, 724781 Satellite W-chromosome 585 chrUn_NT_474905v1 317 1463 CR1-F 795 + 317 1463 0 2 337,285, 0,861, +,+, 724784 LINE CR1 585 chrUn_NT_474907v1 746 2128 GGXHOI 342 - 746 2128 0 5 321,286,310,211,155, 0,332,635,1002,1227, -,-,-,-,-, 724800 Satellite W-chromosome 585 chrUn_NT_474907v1 2221 4331 GGXHOI 394 - 2221 4331 0 9 132,58,329,133,234,139,457,132,223, 0,144,241,583,749,1046,1203,1697,1887, -,-,-,-,-,-,-,-,-, 724801 Satellite W-chromosome 585 chrUn_NT_474910v1 3211 4162 GGXHOI 366 - 3211 4162 0 2 681,216, 0,735, -,-, 724807 Satellite W-chromosome 585 chrUn_NT_474916v1 1177 2387 (CGAGG)n 452 + 1177 2387 0 2 1065,122, 0,1088, +,+, 724819 Simple_repeat Simple_repeat 585 chrUn_NT_474916v1 2419 2887 (CGAGG)n 468 + 2419 2887 0 3 59,169,179, 0,103,289, +,+,+, 724821 Simple_repeat Simple_repeat 585 chrUn_NT_474919v1 1760 3741 GGXHOI 560 - 1760 3741 0 2 473,503, 0,1478, -,-, 724839 Satellite W-chromosome 585 chrUn_NT_474920v1 583 726 GA-rich 316 + 583 726 0 2 43,67, 0,76, +,+, 724844 Low_complexity Low_complexity 585 chrUn_NT_474921v1 3081 3369 (CTCTATGGGG)n 355 - 3081 3369 0 2 109,137, 0,151, -,-, 724857 Satellite Satellite 585 chrUn_NT_474922v1 3082 4312 Sat-CR1_GG 128 - 3082 4312 0 2 945,17, 0,1213, -,-, 724863 Satellite Satellite 585 chrUn_NT_474924v1 1626 2232 CR1-H 619 + 1626 2232 0 2 470,130, 0,476, +,+, 724868 LINE CR1 585 chrUn_NT_474925v1 2173 2920 GGXHOI 371 + 2173 2920 0 3 396,131,132, 0,429,615, +,+,+, 724871 Satellite W-chromosome 585 chrUn_NT_474925v1 2997 3862 GGXHOI 438 + 2997 3862 0 2 315,538, 0,327, +,+, 724872 Satellite W-chromosome 585 chrUn_NT_474928v1 2864 3562 (ACCCCATAGGG)n 610 + 2864 3562 0 3 387,120,72, 0,387,626, +,+,+, 724881 Satellite Satellite 585 chrUn_NT_474930v1 907 4281 GGXHOI 562 + 907 4281 0 3 1056,56,876, 0,2032,2498, +,+,+, 724893 Satellite W-chromosome 585 chrUn_NT_474934v1 3443 4076 GGXHOI 313 - 3443 4076 0 3 336,147,124, 0,348,509, -,-,-, 724910 Satellite W-chromosome 585 chrUn_NT_474936v1 277 875 GGXHOI 411 - 277 875 0 2 353,228, 0,370, -,-, 724914 Satellite W-chromosome 585 chrUn_NT_474936v1 975 2453 GGXHOI 417 - 975 2453 0 4 361,357,435,271, 0,376,753,1207, -,-,-,-, 724915 Satellite W-chromosome 585 chrUn_NT_474936v1 3221 4326 GGXHOI 401 - 3221 4326 0 3 358,354,357, 0,374,748, -,-,-, 724917 Satellite W-chromosome 585 chrUn_NT_474939v1 1028 1929 Sat-CR1_GG 212 + 1028 1929 0 2 164,476, 0,425, +,+, 724928 Satellite Satellite 585 chrUn_NT_474940v1 501 911 GGXHOI 360 - 501 911 0 2 190,180, 0,230, -,-, 724937 Satellite W-chromosome 585 chrUn_NT_474940v1 1040 2028 GGXHOI 331 - 1040 2028 0 3 135,196,604, 0,146,384, -,-,-, 724938 Satellite W-chromosome 585 chrUn_NT_474940v1 2115 2698 GGXHOI 353 - 2115 2698 0 2 413,117, 0,466, -,-, 724939 Satellite W-chromosome 585 chrUn_NT_474940v1 2797 4293 GGXHOI 376 - 2797 4293 0 2 413,1048, 0,448, -,-, 724940 Satellite W-chromosome 585 chrUn_NT_474941v1 97 1071 (CACTC)n 452 + 97 1071 0 4 177,178,184,364, 0,190,404,610, +,+,+,+, 724942 Simple_repeat Simple_repeat 585 chrUn_NT_474941v1 1736 4323 GGLTR7A 720 + 1736 4323 0 4 609,636,1084,86, 0,609,1417,2501, +,+,+,+, 724946 LTR ERV1 585 chrUn_NT_474944v1 1292 4320 GGXHOI 372 - 1292 4320 0 9 342,839,234,133,124,135,257,646,145, 0,357,1228,1476,1629,1768,1948,2220,2883, -,-,-,-,-,-,-,-,-, 724964 Satellite W-chromosome 585 chrUn_NT_474945v1 1565 3565 GGXHOI 357 + 1565 3565 0 3 741,646,553, 0,758,1447, +,+,+, 724967 Satellite W-chromosome 585 chrUn_NT_474952v1 1783 3808 GGXHOI 359 + 1783 3808 0 2 146,1858, 0,167, +,+, 724993 Satellite W-chromosome 585 chrUn_NT_474957v1 385 1203 (CAAGG)n 632 + 385 1203 0 4 171,175,177,237, 0,196,388,581, +,+,+,+, 725015 Simple_repeat Simple_repeat 585 chrUn_NT_474957v1 1273 2401 (CAAGG)n 565 + 1273 2401 0 4 231,370,187,278, 0,250,660,850, +,+,+,+, 725017 Simple_repeat Simple_repeat 585 chrUn_NT_474957v1 2453 3258 (CAAGG)n 569 + 2453 3258 0 2 187,594, 0,211, +,+, 725019 Simple_repeat Simple_repeat 585 chrUn_NT_474957v1 3379 3913 (CAGGC)n 452 + 3379 3913 0 2 141,215, 0,319, +,+, 725022 Simple_repeat Simple_repeat 585 chrUn_NT_474957v1 3789 4315 (CAAGG)n 607 + 3789 4315 0 2 240,229, 0,297, +,+, 725024 Simple_repeat Simple_repeat 585 chrUn_NT_474958v1 1263 1549 (ACCCATTGGG)n 308 + 1263 1549 0 2 129,109, 0,177, +,+, 725028 Satellite Satellite 585 chrUn_NT_474962v1 3703 4030 (CTCTATGGGG)n 720 - 3703 4030 0 2 165,40, 0,287, -,-, 725056 Satellite Satellite 585 chrUn_NT_474962v1 4012 4303 (CTCTATGGGG)n 692 + 4012 4303 0 2 124,53, 0,238, +,+, 725058 Satellite Satellite 585 chrUn_NT_474963v1 1830 4044 (TTAGGG)n 629 + 1830 4044 0 7 181,182,148,469,539,205,201, 0,218,416,737,1206,1778,2013, +,+,+,+,+,+,+, 725064 Simple_repeat Simple_repeat 585 chrUn_NT_474964v1 790 1929 GGXHOI 416 + 790 1929 0 2 187,937, 0,202, +,+, 725069 Satellite W-chromosome 585 chrUn_NT_474965v1 1333 2461 GGXHOI 346 + 1333 2461 0 3 128,729,218, 0,164,910, +,+,+, 725075 Satellite W-chromosome 585 chrUn_NT_474965v1 2557 3547 GGXHOI 373 + 2557 3547 0 2 426,548, 0,442, +,+, 725076 Satellite W-chromosome 585 chrUn_NT_474967v1 1240 1603 (CGAGG)n 526 + 1240 1603 0 2 178,173, 0,190, +,+, 725083 Simple_repeat Simple_repeat 585 chrUn_NT_474967v1 1665 2227 (CGAGG)n 536 + 1665 2227 0 3 171,131,59, 0,196,503, +,+,+, 725085 Simple_repeat Simple_repeat 585 chrUn_NT_474967v1 3396 4267 (CGAGG)n 514 + 3396 4267 0 2 483,359, 0,512, +,+, 725095 Simple_repeat Simple_repeat 585 chrUn_NT_474969v1 668 2515 GGXHOI 415 + 668 2515 0 4 444,569,690,60, 0,471,1060,1787, +,+,+,+, 725103 Satellite W-chromosome 585 chrUn_NT_474969v1 2594 3704 GGXHOI 426 + 2594 3704 0 2 552,523, 0,587, +,+, 725104 Satellite W-chromosome 585 chrUn_NT_474972v1 3072 3294 (GCCCCACAGCT)n 648 + 3072 3294 0 2 58,35, 0,187, +,+, 725118 Satellite Satellite 585 chrUn_NT_474972v1 3372 3942 (GCCCCACAGCT)n 619 + 3372 3942 0 4 131,130,129,131, 0,142,297,439, +,+,+,+, 725121 Satellite Satellite 585 chrUn_NT_474973v1 1188 2434 (TGAA)n 520 + 1188 2434 0 5 285,93,214,184,192, 0,304,574,807,1054, +,+,+,+,+, 725135 Simple_repeat Simple_repeat 585 chrUn_NT_474973v1 2537 3088 (TGAA)n 537 + 2537 3088 0 3 168,173,185, 0,181,366, +,+,+, 725138 Simple_repeat Simple_repeat 585 chrUn_NT_474978v1 2959 4295 GGLTR7A 825 - 2959 4295 0 3 109,254,971, 0,110,365, -,-,-, 725166 LTR ERV1 585 chrUn_NT_474981v1 2263 2550 (ACCCCATAGGG)n 386 - 2263 2550 0 2 124,141, 0,146, -,-, 725171 Satellite Satellite 585 chrUn_NT_474981v1 2562 3019 (ACCCATAGGG)n 553 - 2562 3019 0 3 153,131,25, 0,173,432, -,-,-, 725172 Satellite Satellite 585 chrUn_NT_474983v1 2478 4294 GGXHOI 414 + 2478 4294 0 2 498,1303, 0,513, +,+, 725193 Satellite W-chromosome 585 chrUn_NT_474984v1 2315 3826 (CGAGG)n 586 + 2315 3826 0 6 164,53,58,98,86,365, 0,401,636,744,1016,1146, +,+,+,+,+,+, 725204 Simple_repeat Simple_repeat 585 chrUn_NT_474985v1 3515 4297 GGXHOI 393 - 3515 4297 0 3 209,335,203, 0,227,579, -,-,-, 725211 Satellite W-chromosome 585 chrUn_NT_474987v1 3658 4297 GGXHOI 520 + 3658 4297 0 2 206,64, 0,575, +,+, 725222 Satellite W-chromosome 585 chrUn_NT_474990v1 1676 2759 GGXHOI 560 - 1676 2759 0 2 538,205, 0,878, -,-, 725249 Satellite W-chromosome 585 chrUn_NT_474990v1 2847 3921 GGXHOI 546 - 2847 3921 0 3 197,60,222, 0,478,852, -,-,-, 725251 Satellite W-chromosome 585 chrUn_NT_474991v1 385 812 (CATCC)n 634 + 385 812 0 2 194,200, 0,227, +,+, 725258 Simple_repeat Simple_repeat 585 chrUn_NT_474991v1 1895 2698 (CATCC)n 580 + 1895 2698 0 2 579,196, 0,607, +,+, 725262 Simple_repeat Simple_repeat 585 chrUn_NT_474994v1 1029 2103 (CAAGG)n 619 + 1029 2103 0 4 150,67,261,379, 0,329,434,695, +,+,+,+, 725284 Simple_repeat Simple_repeat 585 chrUn_NT_474994v1 1790 2145 (CTAGG)n 374 + 1790 2145 0 2 113,54, 0,301, +,+, 725287 Simple_repeat Simple_repeat 585 chrUn_NT_474994v1 2120 2677 (CAAGG)n 615 + 2120 2677 0 2 356,188, 0,369, +,+, 725289 Simple_repeat Simple_repeat 585 chrUn_NT_474994v1 2971 3578 (CAAGG)n 650 + 2971 3578 0 2 212,366, 0,241, +,+, 725293 Simple_repeat Simple_repeat 585 chrUn_NT_474994v1 3632 4061 (CAAGG)n 620 + 3632 4061 0 2 134,109, 0,320, +,+, 725295 Simple_repeat Simple_repeat 585 chrUn_NT_474995v1 580 1035 GGXHOI 308 + 580 1035 0 2 303,108, 0,347, +,+, 725300 Satellite W-chromosome 585 chrUn_NT_474995v1 2452 4072 GGXHOI 372 + 2452 4072 0 2 1048,509, 0,1111, +,+, 725303 Satellite W-chromosome 585 chrUn_NT_474997v1 650 977 GGXHOI 297 + 650 977 0 2 174,136, 0,191, +,+, 725306 Satellite W-chromosome 585 chrUn_NT_474997v1 2851 3259 GGXHOI 287 + 2851 3259 0 2 234,135, 0,273, +,+, 725310 Satellite W-chromosome 585 chrUn_NT_475003v1 145 1557 Sat-CR1_GG 186 + 145 1557 0 2 1086,163, 0,1249, +,+, 725335 Satellite Satellite 585 chrUn_NT_475003v1 1459 3149 GGXHOI 501 + 1459 3149 0 3 557,356,299, 0,1019,1391, +,+,+, 725337 Satellite W-chromosome 585 chrUn_NT_475003v1 3242 3905 GGXHOI 512 + 3242 3905 0 2 63,160, 0,503, +,+, 725339 Satellite W-chromosome 585 chrUn_NT_475004v1 3360 4284 GGXHOI 336 + 3360 4284 0 2 758,132, 0,792, +,+, 725345 Satellite W-chromosome 585 chrUn_NT_475008v1 1158 3343 GGXHOI 576 + 1158 3343 0 4 730,298,194,18, 0,1053,1662,2167, +,+,+,+, 725354 Satellite W-chromosome 585 chrUn_NT_475009v1 900 2382 GGLTR7B 574 - 900 2382 0 2 112,880, 0,602, -,-, 725362 LTR ERV1 585 chrUn_NT_475011v1 3006 3176 (GAGTG)n 308 + 3006 3176 0 2 69,52, 0,118, +,+, 725377 Simple_repeat Simple_repeat 585 chrUn_NT_475013v1 2645 3297 GGXHOI 437 - 2645 3297 0 2 474,139, 0,513, -,-, 725385 Satellite W-chromosome 585 chrUn_NT_475013v1 3380 4260 GGXHOI 388 - 3380 4260 0 2 205,656, 0,224, -,-, 725386 Satellite W-chromosome 585 chrUn_NT_475022v1 819 4270 GGERV10_LTR 924 - 819 4270 0 2 220,3231, 0,220, -,-, 725409 LTR ERVL 585 chrUn_NT_475023v1 1539 4069 GGXHOI 413 - 1539 4069 0 4 436,1527,146,341, 0,493,2032,2189, -,-,-,-, 725411 Satellite W-chromosome 585 chrUn_NT_475024v1 590 4265 GGXHOI 424 - 590 4265 0 14 196,365,325,239,238,326,166,53,207,65,276,157,293,376, 0,212,621,964,1238,1496,1870,2049,2146,2389,2467,2784,2991,3299, -,-,-,-,-,-,-,-,-,-,-,-,-,-, 725413 Satellite W-chromosome 585 chrUn_NT_475027v1 628 1292 (ATGGTG)n 435 + 628 1292 0 2 199,449, 0,215, +,+, 725428 Simple_repeat Simple_repeat 585 chrUn_NT_475027v1 3100 3953 (ATGGTG)n 462 + 3100 3953 0 2 250,589, 0,264, +,+, 725432 Simple_repeat Simple_repeat 585 chrUn_NT_475028v1 1396 2084 GGXHOI 398 - 1396 2084 0 3 202,277,176, 0,220,512, -,-,-, 725435 Satellite W-chromosome 585 chrUn_NT_475028v1 2157 3115 GGXHOI 389 - 2157 3115 0 2 138,804, 0,154, -,-, 725436 Satellite W-chromosome 585 chrUn_NT_475028v1 3230 4272 GGXHOI 396 - 3230 4272 0 5 239,94,146,242,180, 0,289,397,577,862, -,-,-,-,-, 725437 Satellite W-chromosome 585 chrUn_NT_475029v1 2356 3710 CR1-H 660 + 2356 3710 0 2 1241,113, 0,1241, +,+, 725440 LINE CR1 585 chrUn_NT_475035v1 597 1352 GGXHOI 521 + 597 1352 0 2 557,158, 0,597, +,+, 725460 Satellite W-chromosome 585 chrUn_NT_475035v1 1455 2740 GGXHOI 582 + 1455 2740 0 4 171,158,33,25, 0,242,778,1260, +,+,+,+, 725461 Satellite W-chromosome 585 chrUn_NT_475035v1 3243 4246 GGXHOI 564 + 3243 4246 0 2 574,82, 0,921, +,+, 725466 Satellite W-chromosome 585 chrUn_NT_475036v1 2159 3515 CR1-X 373 + 2159 3515 0 2 111,156, 0,1200, +,+, 725470 LINE CR1 585 chrUn_NT_475037v1 3624 4243 (CTCTATGGGG)n 535 - 3624 4243 0 3 163,126,270, 0,189,349, -,-,-, 725484 Satellite Satellite 585 chrUn_NT_475041v1 1060 3275 GGXHOI 517 + 1060 3275 0 4 435,267,852,15, 0,446,1031,2200, +,+,+,+, 725494 Satellite W-chromosome 585 chrUn_NT_475046v1 1469 1554 (C)n 634 + 1469 1554 0 2 32,30, 0,55, +,+, 725506 Simple_repeat Simple_repeat 585 chrUn_NT_475049v1 131 1883 (CCTCG)n 483 + 131 1883 0 4 496,181,769,53, 0,524,750,1699, +,+,+,+, 725524 Simple_repeat Simple_repeat 585 chrUn_NT_475049v1 3339 4244 (CCTCG)n 492 + 3339 4244 0 3 187,290,381, 0,204,524, +,+,+, 725532 Simple_repeat Simple_repeat 585 chrUn_NT_475050v1 1798 4169 GGXHOI 357 - 1798 4169 0 3 759,1055,495, 0,804,1876, -,-,-, 725535 Satellite W-chromosome 585 chrUn_NT_475051v1 2544 3367 (CCTTG)n 462 + 2544 3367 0 5 172,100,87,163,24, 0,187,470,613,799, +,+,+,+,+, 725546 Simple_repeat Simple_repeat 585 chrUn_NT_475051v1 3420 3810 (CCTTG)n 496 + 3420 3810 0 2 132,69, 0,321, +,+, 725549 Simple_repeat Simple_repeat 585 chrUn_NT_475056v1 869 1879 GGXHOI 356 + 869 1879 0 2 807,176, 0,834, +,+, 725565 Satellite W-chromosome 585 chrUn_NT_475061v1 665 2831 GGXHOI 403 - 665 2831 0 2 1376,774, 0,1392, -,-, 725588 Satellite W-chromosome 585 chrUn_NT_475061v1 3028 4212 GGXHOI 335 - 3028 4212 0 3 223,628,288, 0,253,896, -,-,-, 725589 Satellite W-chromosome 585 chrUn_NT_475066v1 413 974 (CGAGG)n 502 + 413 974 0 2 316,73, 0,488, +,+, 725608 Simple_repeat Simple_repeat 585 chrUn_NT_475066v1 1325 1699 (CGAGG)n 498 + 1325 1699 0 2 144,51, 0,323, +,+, 725613 Simple_repeat Simple_repeat 585 chrUn_NT_475070v1 2143 4183 GGXHOI 325 - 2143 4183 0 3 295,1410,280, 0,334,1760, -,-,-, 725634 Satellite W-chromosome 585 chrUn_NT_475071v1 1543 1857 (CGAGG)n 470 + 1543 1857 0 2 172,131, 0,183, +,+, 725641 Simple_repeat Simple_repeat 585 chrUn_NT_475071v1 2574 3148 (CGAGG)n 478 + 2574 3148 0 2 354,182, 0,392, +,+, 725645 Simple_repeat Simple_repeat 585 chrUn_NT_475073v1 38 2711 (CAAGG)n 602 + 38 2711 0 9 185,266,196,332,44,450,237,184,180, 0,195,639,860,1367,1594,2044,2295,2493, +,+,+,+,+,+,+,+,+, 725655 Simple_repeat Simple_repeat 585 chrUn_NT_475073v1 2796 3183 (CAAGG)n 641 + 2796 3183 0 2 181,206, 0,181, +,+, 725660 Simple_repeat Simple_repeat 585 chrUn_NT_475073v1 3225 4183 (CAAGG)n 639 + 3225 4183 0 4 265,178,238,266, 0,276,454,692, +,+,+,+, 725662 Simple_repeat Simple_repeat 585 chrUn_NT_475076v1 770 3196 GGXHOI 329 - 770 3196 0 5 168,217,258,1116,582, 0,179,436,711,1844, -,-,-,-,-, 725671 Satellite W-chromosome 585 chrUn_NT_475077v1 660 811 G-rich 420 + 660 811 0 2 82,43, 0,108, +,+, 725674 Low_complexity Low_complexity 585 chrUn_NT_475079v1 2321 3133 (ACCCCATAGGG)n 612 - 2321 3133 0 3 249,308,194, 0,249,618, -,-,-, 725702 Satellite Satellite 585 chrUn_NT_475080v1 2036 3189 GGXHOI 344 - 2036 3189 0 2 637,501, 0,652, -,-, 725708 Satellite W-chromosome 585 chrUn_NT_475083v1 1258 2172 GGXHOI 388 - 1258 2172 0 2 646,257, 0,657, -,-, 725724 Satellite W-chromosome 585 chrUn_NT_475083v1 2250 2836 GGXHOI 359 - 2250 2836 0 2 433,142, 0,444, -,-, 725725 Satellite W-chromosome 585 chrUn_NT_475083v1 2926 4075 GGXHOI 400 - 2926 4075 0 2 852,277, 0,872, -,-, 725726 Satellite W-chromosome 585 chrUn_NT_475084v1 3580 4037 CR1-H 677 + 3580 4037 0 2 296,161, 0,296, +,+, 725730 LINE CR1 585 chrUn_NT_475086v1 2653 4209 GGXHOI 392 - 2653 4209 0 2 616,878, 0,678, -,-, 725739 Satellite W-chromosome 585 chrUn_NT_475088v1 2781 4219 GGXHOI 405 + 2781 4219 0 4 386,143,508,361, 0,400,555,1077, +,+,+,+, 725745 Satellite W-chromosome 585 chrUn_NT_475095v1 492 2611 GGXHOI 539 - 492 2611 0 4 539,743,24,225, 0,879,1635,1894, -,-,-,-, 725781 Satellite W-chromosome 585 chrUn_NT_475095v1 2698 3777 GGXHOI 558 - 2698 3777 0 2 538,205, 0,874, -,-, 725784 Satellite W-chromosome 585 chrUn_NT_475098v1 580 3495 GGERV20_I-int 831 + 580 3495 0 3 944,1547,217, 0,1147,2698, +,+,+, 725807 LTR ERVL 585 chrUn_NT_475100v1 313 1659 GGXHOI 387 - 313 1659 0 4 224,238,393,362, 0,284,540,984, -,-,-,-, 725818 Satellite W-chromosome 585 chrUn_NT_475100v1 2156 2765 GGXHOI 327 - 2156 2765 0 3 166,254,129, 0,208,480, -,-,-, 725821 Satellite W-chromosome 585 chrUn_NT_475100v1 2851 4207 GGXHOI 372 - 2851 4207 0 6 325,227,127,260,202,131, 0,343,585,726,999,1225, -,-,-,-,-,-, 725822 Satellite W-chromosome 585 chrUn_NT_475101v1 2396 4200 GGXHOI 471 + 2396 4200 0 2 168,1620, 0,184, +,+, 725824 Satellite W-chromosome 585 chrUn_NT_475105v1 1606 2234 CR1-H 677 + 1606 2234 0 2 471,138, 0,490, +,+, 725842 LINE CR1 585 chrUn_NT_475111v1 977 4192 Z-REP 858 + 977 4192 0 2 935,2269, 0,946, +,+, 725868 Satellite macro 585 chrUn_NT_475112v1 3849 4154 CR1-X 515 + 3849 4154 0 3 169,77,55, 0,169,250, +,+,+, 725873 LINE CR1 585 chrUn_NT_475113v1 3640 4198 GGXHOI 404 - 3640 4198 0 2 212,326, 0,232, -,-, 725875 Satellite W-chromosome 585 chrUn_NT_475114v1 637 1385 (ACCCCATAGGG)n 361 + 637 1385 0 4 159,152,159,165, 0,219,390,583, +,+,+,+, 725878 Satellite Satellite 585 chrUn_NT_475119v1 1764 2519 GGXHOI 405 + 1764 2519 0 2 607,137, 0,618, +,+, 725894 Satellite W-chromosome 585 chrUn_NT_475119v1 2596 4201 GGXHOI 386 + 2596 4201 0 4 227,119,1083,91, 0,243,377,1514, +,+,+,+, 725895 Satellite W-chromosome 585 chrUn_NT_475120v1 677 2825 GGXHOI 375 + 677 2825 0 5 564,715,236,260,231, 0,579,1341,1600,1917, +,+,+,+,+, 725897 Satellite W-chromosome 585 chrUn_NT_475120v1 2891 4187 GGXHOI 361 + 2891 4187 0 2 332,949, 0,347, +,+, 725898 Satellite W-chromosome 585 chrUn_NT_475121v1 2545 2927 (ACCCATAGGG)n 699 + 2545 2927 0 2 118,264, 0,118, +,+, 725902 Satellite Satellite 585 chrUn_NT_475121v1 3073 3411 (ACCCATAGGG)n 660 + 3073 3411 0 3 73,11,19, 0,190,319, +,+,+, 725904 Satellite Satellite 585 chrUn_NT_475121v1 3499 3834 (ACCCATAGGG)n 666 + 3499 3834 0 2 202,17, 0,318, +,+, 725907 Satellite Satellite 585 chrUn_NT_475123v1 2850 3959 GGXHOI 406 - 2850 3959 0 5 113,123,230,174,349, 0,157,310,557,760, -,-,-,-,-, 725930 Satellite W-chromosome 585 chrUn_NT_475124v1 3865 3978 (CTTT)n 236 + 3865 3978 0 2 41,9, 0,104, +,+, 725944 Simple_repeat Simple_repeat 585 chrUn_NT_475126v1 2274 3465 GGXHOI 404 - 2274 3465 0 4 219,456,180,293, 0,234,705,898, -,-,-,-, 725954 Satellite W-chromosome 585 chrUn_NT_475126v1 3638 4189 GGXHOI 381 - 3638 4189 0 2 403,110, 0,441, -,-, 725955 Satellite W-chromosome 585 chrUn_NT_475127v1 347 1126 GGXHOI 393 + 347 1126 0 2 177,543, 0,236, +,+, 725957 Satellite W-chromosome 585 chrUn_NT_475127v1 1573 4181 GGXHOI 328 + 1573 4181 0 6 269,520,256,679,550,221, 0,287,826,1095,1799,2387, +,+,+,+,+,+, 725959 Satellite W-chromosome 585 chrUn_NT_475129v1 918 1779 (CGAGG)n 461 + 918 1779 0 3 430,181,181, 0,448,680, +,+,+, 725970 Simple_repeat Simple_repeat 585 chrUn_NT_475129v1 2927 3957 (CGAGG)n 479 + 2927 3957 0 3 445,190,337, 0,484,693, +,+,+, 725975 Simple_repeat Simple_repeat 585 chrUn_NT_475132v1 3437 4185 GA-rich 633 + 3437 4185 0 2 180,550, 0,198, +,+, 726019 Low_complexity Low_complexity 585 chrUn_NT_475134v1 958 1496 GGXHOI 394 - 958 1496 0 2 375,133, 0,405, -,-, 726022 Satellite W-chromosome 585 chrUn_NT_475134v1 1585 2000 GGXHOI 361 - 1585 2000 0 3 141,121,110, 0,153,305, -,-,-, 726023 Satellite W-chromosome 585 chrUn_NT_475134v1 2072 2330 GGXHOI 350 - 2072 2330 0 2 143,95, 0,163, -,-, 726024 Satellite W-chromosome 585 chrUn_NT_475134v1 2413 4172 GGXHOI 359 - 2413 4172 0 3 589,833,305, 0,602,1454, -,-,-, 726025 Satellite W-chromosome 585 chrUn_NT_475136v1 877 3101 GGXHOI 378 - 877 3101 0 2 1081,1080, 0,1144, -,-, 726031 Satellite W-chromosome 585 chrUn_NT_475141v1 1358 1738 (CAATG)n 450 + 1358 1738 0 2 165,37, 0,343, +,+, 726045 Simple_repeat Simple_repeat 585 chrUn_NT_475141v1 1852 2988 (CAATG)n 532 + 1852 2988 0 5 187,219,219,167,126, 0,187,406,625,1010, +,+,+,+,+, 726048 Simple_repeat Simple_repeat 585 chrUn_NT_475141v1 3123 3557 (CAATG)n 491 + 3123 3557 0 2 189,225, 0,209, +,+, 726052 Simple_repeat Simple_repeat 585 chrUn_NT_475143v1 1758 4156 GGXHOI 368 - 1758 4156 0 2 1725,656, 0,1742, -,-, 726057 Satellite W-chromosome 585 chrUn_NT_475144v1 571 1556 (CGAGG)n 580 + 571 1556 0 3 196,133,460, 0,373,525, +,+,+, 726062 Simple_repeat Simple_repeat 585 chrUn_NT_475144v1 1595 2088 (CGAGG)n 590 + 1595 2088 0 2 95,194, 0,299, +,+, 726065 Simple_repeat Simple_repeat 585 chrUn_NT_475144v1 2136 2769 (CGAGG)n 524 + 2136 2769 0 2 201,251, 0,382, +,+, 726068 Simple_repeat Simple_repeat 585 chrUn_NT_475144v1 3100 4124 (CGAGG)n 569 + 3100 4124 0 4 185,297,93,206, 0,196,688,818, +,+,+,+, 726073 Simple_repeat Simple_repeat 585 chrUn_NT_475146v1 3586 4017 Sat-CR1_GG 166 - 3586 4017 0 2 24,166, 0,265, -,-, 726092 Satellite Satellite 585 chrUn_NT_475148v1 1159 2121 (GCCCCACAGCT)n 403 + 1159 2121 0 6 129,231,107,23,135,51, 0,173,431,612,655,911, +,+,+,+,+,+, 726117 Satellite Satellite 585 chrUn_NT_475148v1 3004 4056 (GCCCCACAGCT)n 395 + 3004 4056 0 6 178,162,118,134,137,146, 0,232,446,584,718,906, +,+,+,+,+,+, 726125 Satellite Satellite 585 chrUn_NT_475149v1 2376 3897 (CAAGG)n 557 + 2376 3897 0 6 194,169,89,170,262,213, 0,224,571,692,1046,1308, +,+,+,+,+,+, 726135 Simple_repeat Simple_repeat 585 chrUn_NT_475150v1 2713 3507 GGXHOI 359 - 2713 3507 0 2 478,292, 0,502, -,-, 726146 Satellite W-chromosome 585 chrUn_NT_475150v1 3649 4160 GGXHOI 344 - 3649 4160 0 2 355,128, 0,383, -,-, 726147 Satellite W-chromosome 585 chrUn_NT_475153v1 314 824 (CCCCATTGGG)n 515 - 314 824 0 3 227,106,109, 0,239,401, -,-,-, 726154 Satellite Satellite 585 chrUn_NT_475153v1 1022 1258 (CCCCATTGGG)n 418 - 1022 1258 0 2 98,31, 0,205, -,-, 726156 Satellite Satellite 585 chrUn_NT_475153v1 1949 3253 (ACCCATAGAG)n 640 + 1949 3253 0 7 303,156,104,136,128,110,60, 0,303,575,679,815,943,1244, +,+,+,+,+,+,+, 726159 Satellite Satellite 585 chrUn_NT_475153v1 3002 3405 (ACCCCATAGGG)n 586 + 3002 3405 0 2 191,209, 0,194, +,+, 726161 Satellite Satellite 585 chrUn_NT_475154v1 715 2436 GGXHOI 375 - 715 2436 0 3 573,691,432, 0,587,1289, -,-,-, 726164 Satellite W-chromosome 585 chrUn_NT_475154v1 2516 3368 GGXHOI 450 - 2516 3368 0 2 60,768, 0,84, -,-, 726165 Satellite W-chromosome 585 chrUn_NT_475155v1 396 753 (CTCTATGGGG)n 457 - 396 753 0 2 120,225, 0,132, -,-, 726169 Satellite Satellite 585 chrUn_NT_475156v1 2533 3189 (TTAGGG)n 668 + 2533 3189 0 2 178,462, 0,194, +,+, 726181 Simple_repeat Simple_repeat 585 chrUn_NT_475156v1 3419 4141 GGXHOI 298 - 3419 4141 0 2 402,309, 0,413, -,-, 726183 Satellite W-chromosome 585 chrUn_NT_475157v1 2356 3463 CR1-B2 622 - 2356 3463 0 2 892,212, 0,895, -,-, 726189 LINE CR1 585 chrUn_NT_475158v1 1761 2138 GGXHOI 333 + 1761 2138 0 2 111,246, 0,131, +,+, 726192 Satellite W-chromosome 585 chrUn_NT_475158v1 2222 3380 GGXHOI 429 + 2222 3380 0 2 790,325, 0,833, +,+, 726193 Satellite W-chromosome 585 chrUn_NT_475161v1 953 1483 Sat-CR1_GG 168 + 953 1483 0 2 164,123, 0,407, +,+, 726203 Satellite Satellite 585 chrUn_NT_475163v1 2690 3547 GGXHOI 326 + 2690 3547 0 2 570,265, 0,592, +,+, 726226 Satellite W-chromosome 585 chrUn_NT_475164v1 2120 2175 (G)n 1000 + 2120 2175 0 2 19,17, 0,38, +,+, 726231 Simple_repeat Simple_repeat 585 chrUn_NT_475165v1 2152 2417 (ACCCCATAGGG)n 522 - 2152 2417 0 2 62,79, 0,186, -,-, 726243 Satellite Satellite 585 chrUn_NT_475165v1 2350 2623 (CTCTATGGGG)n 642 - 2350 2623 0 2 103,30, 0,243, -,-, 726245 Satellite Satellite 585 chrUn_NT_475165v1 3067 3664 (CTCTATGGGG)n 650 - 3067 3664 0 2 261,109, 0,488, -,-, 726249 Satellite Satellite 585 chrUn_NT_475169v1 2036 4132 GGXHOI 397 - 2036 4132 0 4 434,226,621,718, 0,453,738,1378, -,-,-,-, 726268 Satellite W-chromosome 585 chrUn_NT_475170v1 911 2348 GGXHOI 416 - 911 2348 0 3 841,345,177, 0,858,1260, -,-,-, 726270 Satellite W-chromosome 585 chrUn_NT_475171v1 278 1311 (CGAGG)n 569 + 278 1311 0 3 175,139,353, 0,195,680, +,+,+, 726273 Simple_repeat Simple_repeat 585 chrUn_NT_475171v1 2692 3383 (CCTCG)n 511 + 2692 3383 0 2 327,329, 0,362, +,+, 726282 Simple_repeat Simple_repeat 585 chrUn_NT_475171v1 3629 4118 (CCTCG)n 446 + 3629 4118 0 2 247,65, 0,424, +,+, 726284 Simple_repeat Simple_repeat 585 chrUn_NT_475172v1 1255 3040 GGXHOI 405 - 1255 3040 0 3 246,555,920, 0,264,865, -,-,-, 726288 Satellite W-chromosome 585 chrUn_NT_475172v1 3157 3677 GGXHOI 428 - 3157 3677 0 2 282,226, 0,294, -,-, 726289 Satellite W-chromosome 585 chrUn_NT_475172v1 3742 4123 GGXHOI 391 - 3742 4123 0 2 130,234, 0,147, -,-, 726290 Satellite W-chromosome 585 chrUn_NT_475175v1 1130 4124 GGXHOI 431 - 1130 4124 0 7 431,192,597,383,956,166,55, 0,468,696,1334,1754,2744,2939, -,-,-,-,-,-,-, 726308 Satellite W-chromosome 585 chrUn_NT_475176v1 1083 1523 (CCCCATTGGG)n 388 + 1083 1523 0 2 27,177, 0,263, +,+, 726312 Satellite Satellite 585 chrUn_NT_475178v1 2200 4085 GGXHOI 356 - 2200 4085 0 6 421,131,137,135,836,137, 0,433,591,743,895,1748, -,-,-,-,-,-, 726331 Satellite W-chromosome 585 chrUn_NT_475179v1 1576 4134 GGXHOI 382 + 1576 4134 0 8 163,1154,131,136,204,131,354,126, 0,183,1352,1506,1662,1887,2062,2432, +,+,+,+,+,+,+,+, 726333 Satellite W-chromosome 585 chrUn_NT_475180v1 1279 4131 GGXHOI 499 - 1279 4131 0 6 130,227,296,806,96,276, 0,157,690,1309,2424,2576, -,-,-,-,-,-, 726337 Satellite W-chromosome 585 chrUn_NT_475183v1 1827 2202 (CGAGG)n 564 + 1827 2202 0 2 176,178, 0,197, +,+, 726349 Simple_repeat Simple_repeat 585 chrUn_NT_475186v1 1598 2082 (CTCTATGGGG)n 666 - 1598 2082 0 2 206,81, 0,403, -,-, 726374 Satellite Satellite 585 chrUn_NT_475189v1 797 3943 GGXHOI 520 - 797 3943 0 6 111,179,193,314,193,258, 0,621,1122,1607,2249,2888, -,-,-,-,-,-, 726392 Satellite W-chromosome 585 chrUn_NT_475190v1 1263 1935 (C)n 715 + 1263 1935 0 9 27,27,26,24,27,27,25,25,24, 0,82,164,244,324,406,488,568,648, +,+,+,+,+,+,+,+,+, 726400 Simple_repeat Simple_repeat 585 chrUn_NT_475192v1 318 761 (TTAGGG)n 718 + 318 761 0 2 248,195, 0,248, +,+, 726408 Simple_repeat Simple_repeat 585 chrUn_NT_475192v1 809 2292 (TTAGGG)n 604 + 809 2292 0 4 387,179,177,683, 0,399,599,800, +,+,+,+, 726410 Simple_repeat Simple_repeat 585 chrUn_NT_475192v1 2887 4118 (TTAGGG)n 626 + 2887 4118 0 3 218,240,681, 0,270,550, +,+,+, 726416 Simple_repeat Simple_repeat 585 chrUn_NT_475193v1 1900 2631 (CAAGG)n 640 + 1900 2631 0 3 270,62,223, 0,446,508, +,+,+, 726422 Simple_repeat Simple_repeat 585 chrUn_NT_475193v1 2675 3412 (CAAGG)n 514 + 2675 3412 0 3 225,264,214, 0,259,523, +,+,+, 726425 Simple_repeat Simple_repeat 585 chrUn_NT_475193v1 3394 3751 (CAGGC)n 512 + 3394 3751 0 2 142,34, 0,323, +,+, 726427 Simple_repeat Simple_repeat 585 chrUn_NT_475193v1 3772 4122 (CAAGG)n 568 + 3772 4122 0 2 103,36, 0,314, +,+, 726429 Simple_repeat Simple_repeat 585 chrUn_NT_475195v1 2957 3233 (ACCCATTGGG)n 302 - 2957 3233 0 2 125,115, 0,161, -,-, 726437 Satellite Satellite 585 chrUn_NT_475197v1 700 790 (GCCCC)n 368 + 700 790 0 2 7,14, 0,76, +,+, 726444 Simple_repeat Simple_repeat 585 chrUn_NT_475204v1 3504 4101 (CACTC)n 450 + 3504 4101 0 2 217,360, 0,237, +,+, 726500 Simple_repeat Simple_repeat 585 chrUn_NT_475205v1 1091 1481 GGXHOI 399 + 1091 1481 0 2 223,152, 0,238, +,+, 726502 Satellite W-chromosome 585 chrUn_NT_475205v1 3288 4112 GGXHOI 416 + 3288 4112 0 2 474,335, 0,489, +,+, 726505 Satellite W-chromosome 585 chrUn_NT_475206v1 3716 3903 (CCCCCG)n 140 + 3716 3903 0 2 122,19, 0,168, +,+, 726515 Simple_repeat Simple_repeat 585 chrUn_NT_475207v1 838 2462 GGXHOI 339 + 838 2462 0 2 335,1263, 0,361, +,+, 726518 Satellite W-chromosome 585 chrUn_NT_475207v1 2767 3325 GGXHOI 273 + 2767 3325 0 2 183,325, 0,233, +,+, 726519 Satellite W-chromosome 585 chrUn_NT_475208v1 731 1114 GA-rich 372 + 731 1114 0 2 180,30, 0,353, +,+, 726524 Low_complexity Low_complexity 585 chrUn_NT_475209v1 1251 2037 GGXHOI 341 + 1251 2037 0 2 387,378, 0,408, +,+, 726539 Satellite W-chromosome 585 chrUn_NT_475209v1 3006 4102 GGXHOI 385 + 3006 4102 0 2 151,930, 0,166, +,+, 726541 Satellite W-chromosome 585 chrUn_NT_475216v1 772 3896 GGXHOI 368 - 772 3896 0 3 1859,640,598, 0,1875,2526, -,-,-, 726577 Satellite W-chromosome 585 chrUn_NT_475219v1 362 1516 GGXHOI 550 + 362 1516 0 2 275,686, 0,468, +,+, 726589 Satellite W-chromosome 585 chrUn_NT_475219v1 1586 3039 GGXHOI 532 + 1586 3039 0 2 210,1021, 0,432, +,+, 726591 Satellite W-chromosome 585 chrUn_NT_475219v1 3267 4099 GGXHOI 517 + 3267 4099 0 2 171,641, 0,191, +,+, 726594 Satellite W-chromosome 585 chrUn_NT_475222v1 749 2824 GGERVL-C-int 702 + 749 2824 0 2 1462,613, 0,1462, +,+, 726602 LTR ERVL 585 chrUn_NT_475222v1 3448 4075 CR1-F 546 + 3448 4075 0 3 177,184,184, 0,218,443, +,+,+, 726604 LINE CR1 585 chrUn_NT_475224v1 826 1737 GGXHOI 346 + 826 1737 0 2 497,363, 0,548, +,+, 726607 Satellite W-chromosome 585 chrUn_NT_475224v1 2222 3387 GGXHOI 373 + 2222 3387 0 3 637,146,348, 0,654,817, +,+,+, 726608 Satellite W-chromosome 585 chrUn_NT_475227v1 68 321 (ACCCATAGGG)n 423 - 68 321 0 2 111,115, 0,138, -,-, 726616 Satellite Satellite 585 chrUn_NT_475227v1 1330 1831 (ACCCATAGGG)n 577 - 1330 1831 0 3 174,51,159, 0,291,342, -,-,-, 726627 Satellite Satellite 585 chrUn_NT_475227v1 2140 2428 (ACCCATAGGG)n 505 - 2140 2428 0 2 57,209, 0,79, -,-, 726632 Satellite Satellite 585 chrUn_NT_475227v1 3127 4060 (ACCCATAGGG)n 530 - 3127 4060 0 5 19,114,76,127,122, 0,355,574,661,811, -,-,-,-,-, 726638 Satellite Satellite 585 chrUn_NT_475228v1 321 989 (CAAGG)n 505 + 321 989 0 2 181,456, 0,212, +,+, 726645 Simple_repeat Simple_repeat 585 chrUn_NT_475228v1 1054 1606 (CCTTG)n 512 + 1054 1606 0 2 109,80, 0,472, +,+, 726647 Simple_repeat Simple_repeat 585 chrUn_NT_475229v1 982 3968 GGXHOI 421 + 982 3968 0 3 1582,402,959, 0,1597,2027, +,+,+, 726658 Satellite W-chromosome 585 chrUn_NT_475233v1 1822 3138 (ACCCATTGGG)n 502 - 1822 3138 0 3 235,881,66, 0,249,1250, -,-,-, 726674 Satellite Satellite 585 chrUn_NT_475233v1 3328 4082 (ACCCATTGGG)n 518 + 3328 4082 0 4 297,180,108,125, 0,307,509,629, +,+,+,+, 726677 Satellite Satellite 585 chrUn_NT_475236v1 1155 4070 GGXHOI 373 + 1155 4070 0 3 880,431,1524, 0,943,1391, +,+,+, 726683 Satellite W-chromosome 585 chrUn_NT_475238v1 1062 3126 (CCCTAA)n 614 + 1062 3126 0 8 362,314,185,333,125,59,223,201, 0,362,687,889,1241,1557,1616,1863, +,+,+,+,+,+,+,+, 726697 Simple_repeat Simple_repeat 585 chrUn_NT_475240v1 1153 1309 CR1-H2 488 + 1153 1309 0 2 82,74, 0,82, +,+, 726711 LINE CR1 585 chrUn_NT_475241v1 1510 2295 (CGAGG)n 563 + 1510 2295 0 3 185,172,379, 0,198,406, +,+,+, 726719 Simple_repeat Simple_repeat 585 chrUn_NT_475241v1 2366 2995 (CGAGG)n 591 + 2366 2995 0 3 183,201,221, 0,207,408, +,+,+, 726721 Simple_repeat Simple_repeat 585 chrUn_NT_475242v1 3449 4009 CR1-X 421 - 3449 4009 0 3 216,132,170, 0,258,390, -,-,-, 726730 LINE CR1 585 chrUn_NT_475243v1 58 2262 GGLTR10D-int 926 + 58 2262 0 2 1837,364, 0,1840, +,+, 726732 LTR ERVK 585 chrUn_NT_475249v1 1392 2346 (CCTTG)n 479 + 1392 2346 0 3 344,334,75, 0,372,879, +,+,+, 726758 Simple_repeat Simple_repeat 585 chrUn_NT_475249v1 2914 3770 (CAAGG)n 508 + 2914 3770 0 3 192,372,225, 0,234,631, +,+,+, 726763 Simple_repeat Simple_repeat 585 chrUn_NT_475250v1 273 1273 (TTAGGG)n 640 + 273 1273 0 4 174,381,188,205, 0,205,607,795, +,+,+,+, 726767 Simple_repeat Simple_repeat 585 chrUn_NT_475250v1 1321 3262 (TTAGGG)n 620 + 1321 3262 0 6 591,180,259,212,186,193, 0,615,856,1297,1551,1748, +,+,+,+,+,+, 726769 Simple_repeat Simple_repeat 585 chrUn_NT_475250v1 3558 4062 (TTAGGG)n 648 + 3558 4062 0 2 248,83, 0,421, +,+, 726774 Simple_repeat Simple_repeat 585 chrUn_NT_475252v1 239 3972 GGXHOI 375 - 239 3972 0 4 1001,1336,752,587, 0,1019,2376,3146, -,-,-,-, 726782 Satellite W-chromosome 585 chrUn_NT_475254v1 2043 2313 CR1-C4 424 + 2043 2313 0 2 132,138, 0,132, +,+, 726801 LINE CR1 585 chrUn_NT_475255v1 1032 4068 GGXHOI 403 - 1032 4068 0 8 305,129,276,325,512,841,147,297, 0,327,483,775,1141,1670,2530,2739, -,-,-,-,-,-,-,-, 726805 Satellite W-chromosome 585 chrUn_NT_475269v1 3595 4060 GGLTR3F1 742 + 3595 4060 0 2 401,29, 0,436, +,+, 726872 LTR ERVL 585 chrUn_NT_475271v1 1948 2502 (CCCTAA)n 548 + 1948 2502 0 2 103,263, 0,291, +,+, 726886 Simple_repeat Simple_repeat 585 chrUn_NT_475271v1 2503 2782 (TTAGGG)n 574 + 2503 2782 0 2 93,174, 0,105, +,+, 726888 Simple_repeat Simple_repeat 585 chrUn_NT_475271v1 2783 4049 GGXHOI 361 + 2783 4049 0 3 573,299,355, 0,585,911, +,+,+, 726889 Satellite W-chromosome 585 chrUn_NT_475273v1 1357 2736 GGXHOI 602 - 1357 2736 0 2 406,299, 0,1080, -,-, 726896 Satellite W-chromosome 585 chrUn_NT_475273v1 2747 3816 GGXHOI 625 - 2747 3816 0 2 828,199, 0,870, -,-, 726899 Satellite W-chromosome 585 chrUn_NT_475275v1 158 1398 (CGAGG)n 576 + 158 1398 0 4 186,259,104,479, 0,186,629,761, +,+,+,+, 726913 Simple_repeat Simple_repeat 585 chrUn_NT_475275v1 1508 2949 (CGAGG)n 527 + 1508 2949 0 6 172,25,134,35,210,282, 0,356,409,722,772,1159, +,+,+,+,+,+, 726916 Simple_repeat Simple_repeat 585 chrUn_NT_475275v1 3050 4041 (CGAGG)n 566 + 3050 4041 0 3 152,15,374, 0,422,617, +,+,+, 726921 Simple_repeat Simple_repeat 585 chrUn_NT_475285v1 2370 3244 Sat-CR1_GG 190 - 2370 3244 0 2 467,180, 0,694, -,-, 726947 Satellite Satellite 585 chrUn_NT_475286v1 1242 1422 (GCCCCACAGCT)n 364 - 1242 1422 0 2 90,30, 0,150, -,-, 726955 Satellite Satellite 585 chrUn_NT_475287v1 3099 3712 CR1-H 671 + 3099 3712 0 2 453,139, 0,474, +,+, 726966 LINE CR1 585 chrUn_NT_475289v1 1178 3480 (CGAGG)n 453 + 1178 3480 0 2 179,2067, 0,235, +,+, 726979 Simple_repeat Simple_repeat 585 chrUn_NT_475289v1 3562 4047 (CGAGG)n 451 + 3562 4047 0 2 311,156, 0,329, +,+, 726981 Simple_repeat Simple_repeat 585 chrUn_NT_475290v1 1406 1617 (ACCCCATAGGG)n 595 - 1406 1617 0 2 122,70, 0,141, -,-, 726985 Satellite Satellite 585 chrUn_NT_475290v1 2530 3433 (ACCCCATAGGG)n 605 - 2530 3433 0 3 231,483,127, 0,244,776, -,-,-, 726987 Satellite Satellite 585 chrUn_NT_475290v1 3565 3874 (ACCCCATAGGG)n 553 - 3565 3874 0 2 132,133, 0,176, -,-, 726988 Satellite Satellite 585 chrUn_NT_475291v1 1572 2664 GGXHOI 363 + 1572 2664 0 2 667,407, 0,685, +,+, 726992 Satellite W-chromosome 585 chrUn_NT_475291v1 2910 4045 GGXHOI 350 + 2910 4045 0 2 986,130, 0,1005, +,+, 726993 Satellite W-chromosome 585 chrUn_NT_475292v1 2590 3219 GGXHOI 373 + 2590 3219 0 2 301,271, 0,358, +,+, 726997 Satellite W-chromosome 585 chrUn_NT_475293v1 1505 1996 (CTCTATGGGG)n 542 + 1505 1996 0 3 101,112,239, 0,119,252, +,+,+, 727001 Satellite Satellite 585 chrUn_NT_475295v1 3505 4031 A-rich 534 + 3505 4031 0 2 433,53, 0,473, +,+, 727017 Low_complexity Low_complexity 585 chrUn_NT_475297v1 384 1029 (CCTTG)n 609 + 384 1029 0 3 184,188,273, 0,184,372, +,+,+, 727021 Simple_repeat Simple_repeat 585 chrUn_NT_475297v1 1640 2430 (CCTTG)n 556 + 1640 2430 0 4 178,232,155,23, 0,178,410,767, +,+,+,+, 727025 Simple_repeat Simple_repeat 585 chrUn_NT_475297v1 2762 3525 (CCTTG)n 690 + 2762 3525 0 3 179,222,136, 0,227,627, +,+,+, 727030 Simple_repeat Simple_repeat 585 chrUn_NT_475298v1 3735 3877 GA-rich 296 + 3735 3877 0 2 43,40, 0,102, +,+, 727037 Low_complexity Low_complexity 585 chrUn_NT_475302v1 1074 3107 GGERVL-A-int 825 + 1074 3107 0 4 235,226,908,480, 0,235,645,1553, +,+,+,+, 727060 LTR ERVL 585 chrUn_NT_475307v1 2795 4023 GGXHOI 333 + 2795 4023 0 2 1015,164, 0,1064, +,+, 727077 Satellite W-chromosome 585 chrUn_NT_475310v1 1051 1295 (ACCCATAGGG)n 242 + 1051 1295 0 2 116,113, 0,131, +,+, 727089 Satellite Satellite 585 chrUn_NT_475310v1 2295 2604 (ACCCATAGGG)n 171 + 2295 2604 0 2 122,145, 0,164, +,+, 727093 Satellite Satellite 585 chrUn_NT_475310v1 2677 2972 (ACCCATAGGG)n 220 + 2677 2972 0 2 122,132, 0,163, +,+, 727094 Satellite Satellite 585 chrUn_NT_475312v1 1373 3935 GGXHOI 405 - 1373 3935 0 4 459,827,617,569, 0,483,1335,1993, -,-,-,-, 727110 Satellite W-chromosome 585 chrUn_NT_475313v1 2806 4025 GGXHOI 367 - 2806 4025 0 3 252,797,134, 0,274,1085, -,-,-, 727112 Satellite W-chromosome 585 chrUn_NT_475318v1 1422 1770 (ACCCATAGAG)n 447 + 1422 1770 0 2 110,216, 0,132, +,+, 727144 Satellite Satellite 585 chrUn_NT_475320v1 692 1814 GGXHOI 546 + 692 1814 0 2 153,474, 0,648, +,+, 727149 Satellite W-chromosome 585 chrUn_NT_475320v1 1845 4019 GGXHOI 535 + 1845 4019 0 5 424,169,405,54,254, 0,464,909,1852,1920, +,+,+,+,+, 727152 Satellite W-chromosome 585 chrUn_NT_475324v1 524 2465 GGXHOI 402 - 524 2465 0 2 563,1358, 0,583, -,-, 727164 Satellite W-chromosome 585 chrUn_NT_475324v1 2663 4008 GGXHOI 416 - 2663 4008 0 2 555,733, 0,612, -,-, 727165 Satellite W-chromosome 585 chrUn_NT_475325v1 1974 2825 GGXHOI 570 - 1974 2825 0 2 55,22, 0,829, -,-, 727169 Satellite W-chromosome 585 chrUn_NT_475326v1 1618 3892 GGXHOI 357 - 1618 3892 0 3 129,543,1525, 0,182,749, -,-,-, 727174 Satellite W-chromosome 585 chrUn_NT_475328v1 1022 1736 (ACCCCATAGGG)n 417 + 1022 1736 0 3 145,335,45, 0,167,669, +,+,+, 727179 Satellite Satellite 585 chrUn_NT_475328v1 1953 2484 (CTCTATGGGG)n 468 + 1953 2484 0 2 216,266, 0,265, +,+, 727181 Satellite Satellite 585 chrUn_NT_475328v1 2967 3369 (GCCCCACAGCT)n 450 - 2967 3369 0 2 240,34, 0,368, -,-, 727184 Satellite Satellite 585 chrUn_NT_475328v1 3350 4019 (ACCCCATAGGG)n 452 - 3350 4019 0 4 129,146,15,34, 0,129,492,635, -,-,-,-, 727186 Satellite Satellite 585 chrUn_NT_475328v1 3625 3842 (CTCTATGGGG)n 592 + 3625 3842 0 2 66,21, 0,196, +,+, 727187 Satellite Satellite 585 chrUn_NT_475331v1 1322 4001 GGXHOI 429 - 1322 4001 0 4 1331,958,128,175, 0,1347,2351,2504, -,-,-,-, 727209 Satellite W-chromosome 585 chrUn_NT_475332v1 3673 3996 G-rich 474 + 3673 3996 0 2 43,225, 0,98, +,+, 727211 Low_complexity Low_complexity 585 chrUn_NT_475334v1 1351 4001 GGXHOI 385 - 1351 4001 0 4 249,1475,473,370, 0,266,1755,2280, -,-,-,-, 727214 Satellite W-chromosome 585 chrUn_NT_475336v1 2335 3987 GGXHOI 429 - 2335 3987 0 3 155,510,935, 0,179,717, -,-,-, 727217 Satellite W-chromosome 585 chrUn_NT_475340v1 1709 2835 GGXHOI 461 - 1709 2835 0 2 733,382, 0,744, -,-, 727237 Satellite W-chromosome 585 chrUn_NT_475340v1 2969 4003 GGXHOI 500 + 2969 4003 0 3 306,50,215, 0,337,819, +,+,+, 727238 Satellite W-chromosome 585 chrUn_NT_475342v1 586 2153 GGXHOI 396 + 586 2153 0 7 379,86,151,384,134,174,99, 0,413,515,688,1126,1277,1468, +,+,+,+,+,+,+, 727243 Satellite W-chromosome 585 chrUn_NT_475342v1 2219 3662 GGXHOI 377 + 2219 3662 0 4 711,324,229,136, 0,726,1064,1307, +,+,+,+, 727244 Satellite W-chromosome 585 chrUn_NT_475346v1 1091 1640 (TATG)n 440 + 1091 1640 0 2 345,189, 0,360, +,+, 727252 Simple_repeat Simple_repeat 585 chrUn_NT_475346v1 2578 3258 (TATG)n 466 + 2578 3258 0 2 263,359, 0,321, +,+, 727253 Simple_repeat Simple_repeat 585 chrUn_NT_475346v1 3365 3930 (TATG)n 442 + 3365 3930 0 2 356,191, 0,374, +,+, 727255 Simple_repeat Simple_repeat 585 chrUn_NT_475347v1 830 1284 (CTCTATGGGG)n 485 - 830 1284 0 3 122,123,118, 0,181,336, -,-,-, 727263 Satellite Satellite 585 chrUn_NT_475348v1 735 1464 GGXHOI 426 - 735 1464 0 3 292,132,245, 0,337,484, -,-,-, 727270 Satellite W-chromosome 585 chrUn_NT_475348v1 1806 3966 GGXHOI 445 - 1806 3966 0 4 310,662,898,148, 0,343,1067,2012, -,-,-,-, 727272 Satellite W-chromosome 585 chrUn_NT_475352v1 1432 2949 GGXHOI 381 - 1432 2949 0 3 251,792,415, 0,266,1102, -,-,-, 727286 Satellite W-chromosome 585 chrUn_NT_475352v1 3036 3963 GGXHOI 372 - 3036 3963 0 2 538,365, 0,562, -,-, 727287 Satellite W-chromosome 585 chrUn_NT_475353v1 371 745 GGXHOI 321 - 371 745 0 2 148,215, 0,159, -,-, 727289 Satellite W-chromosome 585 chrUn_NT_475353v1 2151 3407 GGXHOI 377 - 2151 3407 0 3 970,99,144, 0,988,1112, -,-,-, 727292 Satellite W-chromosome 585 chrUn_NT_475355v1 1323 3988 GGXHOI 367 + 1323 3988 0 3 263,1935,349, 0,326,2316, +,+,+, 727297 Satellite W-chromosome 585 chrUn_NT_475356v1 2157 3519 GGXHOI 544 - 2157 3519 0 2 121,244, 0,1118, -,-, 727301 Satellite W-chromosome 585 chrUn_NT_475358v1 1539 3838 GGLTR11-int 731 - 1539 3838 0 2 1236,150, 0,2149, -,-, 727306 LTR ERV1 585 chrUn_NT_475361v1 2266 2537 (ACCCATAGGG)n 325 - 2266 2537 0 2 127,111, 0,160, -,-, 727320 Satellite Satellite 585 chrUn_NT_475364v1 649 2647 (CAAGG)n 615 + 649 2647 0 6 122,131,209,225,281,341, 0,397,528,942,1196,1657, +,+,+,+,+,+, 727330 Simple_repeat Simple_repeat 585 chrUn_NT_475364v1 2368 3032 (CAGGC)n 466 + 2368 3032 0 2 193,292, 0,372, +,+, 727335 Simple_repeat Simple_repeat 585 chrUn_NT_475364v1 3407 3977 (CAAGG)n 616 + 3407 3977 0 2 191,352, 0,218, +,+, 727341 Simple_repeat Simple_repeat 585 chrUn_NT_475366v1 1908 3979 GGXHOI 576 - 1908 3979 0 5 200,56,70,20,44, 0,858,931,1550,2027, -,-,-,-,-, 727349 Satellite W-chromosome 585 chrUn_NT_475367v1 1038 3973 GGXHOI 426 - 1038 3973 0 4 1333,64,1045,439, 0,1353,1432,2496, -,-,-,-, 727354 Satellite W-chromosome 585 chrUn_NT_475369v1 1671 3973 GGXHOI 379 - 1671 3973 0 3 801,590,870, 0,819,1432, -,-,-, 727356 Satellite W-chromosome 585 chrUn_NT_475371v1 2089 3075 (CCTCG)n 582 + 2089 3075 0 4 188,10,29,184, 0,569,759,802, +,+,+,+, 727369 Simple_repeat Simple_repeat 585 chrUn_NT_475376v1 2536 2758 (CCCGCCG)n 332 + 2536 2758 0 2 41,151, 0,71, +,+, 727387 Simple_repeat Simple_repeat 585 chrUn_NT_475378v1 708 3936 GGXHOI 374 + 708 3936 0 2 299,2910, 0,318, +,+, 727393 Satellite W-chromosome 585 chrUn_NT_475382v1 1266 2800 GGXHOI 601 - 1266 2800 0 4 247,148,297,148, 0,258,1078,1386, -,-,-,-, 727401 Satellite W-chromosome 585 chrUn_NT_475385v1 1152 2013 (CGAGG)n 517 + 1152 2013 0 3 224,177,344, 0,285,517, +,+,+, 727416 Simple_repeat Simple_repeat 585 chrUn_NT_475385v1 3157 3749 (CGAGG)n 488 + 3157 3749 0 2 182,359, 0,233, +,+, 727422 Simple_repeat Simple_repeat 585 chrUn_NT_475388v1 1730 3950 GGXHOI 386 + 1730 3950 0 4 409,984,410,323, 0,429,1433,1897, +,+,+,+, 727436 Satellite W-chromosome 585 chrUn_NT_475391v1 2155 2504 (ACCCATTGGG)n 365 - 2155 2504 0 2 127,191, 0,158, -,-, 727445 Satellite Satellite 585 chrUn_NT_475391v1 3110 3625 (ACCCATTGGG)n 289 - 3110 3625 0 3 216,129,129, 0,246,386, -,-,-, 727447 Satellite Satellite 585 chrUn_NT_475392v1 3566 3954 GGLTR7A 759 + 3566 3954 0 2 215,151, 0,237, +,+, 727450 LTR ERV1 585 chrUn_NT_475393v1 3600 3869 (CTCTATGGGG)n 514 + 3600 3869 0 2 120,116, 0,153, +,+, 727455 Satellite Satellite 585 chrUn_NT_475394v1 522 624 CR1-E 569 - 522 624 0 2 54,48, 0,54, -,-, 727461 LINE CR1 585 chrUn_NT_475394v1 1704 1851 CR1-C4 635 - 1704 1851 0 3 47,43,57, 0,47,90, -,-,-, 727473 LINE CR1 585 chrUn_NT_475397v1 1054 2245 GGXHOI 395 - 1054 2245 0 2 136,1037, 0,154, -,-, 727488 Satellite W-chromosome 585 chrUn_NT_475397v1 3024 3960 GGXHOI 388 - 3024 3960 0 3 188,137,548, 0,237,388, -,-,-, 727490 Satellite W-chromosome 585 chrUn_NT_475398v1 718 3955 GGXHOI 540 + 718 3955 0 5 785,297,195,295,399, 0,1108,1802,2320,2838, +,+,+,+,+, 727492 Satellite W-chromosome 585 chrUn_NT_475401v1 2008 3020 GGXHOI 406 - 2008 3020 0 3 581,244,120, 0,637,892, -,-,-, 727508 Satellite W-chromosome 585 chrUn_NT_475403v1 197 1063 GGXHOI 394 + 197 1063 0 2 559,296, 0,570, +,+, 727516 Satellite W-chromosome 585 chrUn_NT_475403v1 1866 3941 GGXHOI 376 - 1866 3941 0 8 188,179,85,204,312,389,480,92, 0,207,400,499,732,1082,1485,1983, -,-,-,-,-,-,-,-, 727519 Satellite W-chromosome 585 chrUn_NT_475406v1 1112 3947 GGXHOI 392 - 1112 3947 0 2 134,2657, 0,178, -,-, 727528 Satellite W-chromosome 585 chrUn_NT_475410v1 1196 2773 GGXHOI 374 + 1196 2773 0 2 637,923, 0,654, +,+, 727546 Satellite W-chromosome 585 chrUn_NT_475415v1 2623 3123 (ACCCATAGGG)n 452 - 2623 3123 0 2 336,41, 0,459, -,-, 727557 Satellite Satellite 585 chrUn_NT_475415v1 3165 3571 (ACCCATAGAG)n 388 - 3165 3571 0 2 236,46, 0,360, -,-, 727560 Satellite Satellite 585 chrUn_NT_475416v1 1413 1778 (CACAG)n 408 + 1413 1778 0 2 183,8, 0,357, +,+, 727565 Simple_repeat Simple_repeat 585 chrUn_NT_475416v1 2423 2721 CR1-C2 668 + 2423 2721 0 2 75,102, 0,196, +,+, 727569 LINE CR1 585 chrUn_NT_475418v1 575 714 (ACCCATTGGG)n 362 + 575 714 0 2 31,52, 0,87, +,+, 727575 Satellite Satellite 585 chrUn_NT_475418v1 2858 3159 (CCCCATTGGG)n 526 + 2858 3159 0 2 30,64, 0,237, +,+, 727586 Satellite Satellite 585 chrUn_NT_475420v1 742 3939 GGXHOI 354 - 742 3939 0 4 473,562,237,1856, 0,489,1073,1341, -,-,-,-, 727595 Satellite W-chromosome 585 chrUn_NT_475422v1 1436 3309 GGXHOI 459 + 1436 3309 0 3 871,603,362, 0,892,1511, +,+,+, 727600 Satellite W-chromosome 585 chrUn_NT_475422v1 3399 3870 GGXHOI 470 + 3399 3870 0 2 361,93, 0,378, +,+, 727601 Satellite W-chromosome 585 chrUn_NT_475424v1 1235 3588 GGXHOI 348 - 1235 3588 0 6 1281,254,180,172,128,178, 0,1318,1611,1835,2026,2175, -,-,-,-,-,-, 727620 Satellite W-chromosome 585 chrUn_NT_475426v1 693 1005 (CTCTATGGGG)n 502 - 693 1005 0 2 159,29, 0,283, -,-, 727629 Satellite Satellite 585 chrUn_NT_475429v1 857 1904 (CCTTG)n 482 + 857 1904 0 4 172,237,356,223, 0,201,450,824, +,+,+,+, 727649 Simple_repeat Simple_repeat 585 chrUn_NT_475429v1 1929 3874 GGXHOI 377 - 1929 3874 0 2 815,1081, 0,864, -,-, 727650 Satellite W-chromosome 585 chrUn_NT_475430v1 2400 2663 (ACCCATAGGG)n 604 - 2400 2663 0 2 119,137, 0,126, -,-, 727657 Satellite Satellite 585 chrUn_NT_475437v1 1008 1250 (CCCCATTGGG)n 525 - 1008 1250 0 2 116,115, 0,127, -,-, 727698 Satellite Satellite 585 chrUn_NT_475437v1 2572 2982 (CCCCATTGGG)n 532 - 2572 2982 0 2 234,117, 0,293, -,-, 727704 Satellite Satellite 585 chrUn_NT_475437v1 3062 3947 (ACCCATTGGG)n 669 - 3062 3947 0 3 357,292,87, 0,388,798, -,-,-, 727705 Satellite Satellite 585 chrUn_NT_475438v1 2643 2920 (ACCCATAGGG)n 423 - 2643 2920 0 2 149,105, 0,172, -,-, 727708 Satellite Satellite 585 chrUn_NT_475447v1 2226 2610 GGXHOI 328 - 2226 2610 0 2 174,160, 0,224, -,-, 727761 Satellite W-chromosome 585 chrUn_NT_475447v1 2709 3446 GGXHOI 287 - 2709 3446 0 3 152,306,213, 0,171,524, -,-,-, 727762 Satellite W-chromosome 585 chrUn_NT_475447v1 3538 3924 GGXHOI 336 - 3538 3924 0 2 125,243, 0,143, -,-, 727763 Satellite W-chromosome 585 chrUn_NT_475448v1 3512 3918 GGXHOI 342 - 3512 3918 0 2 238,151, 0,255, -,-, 727766 Satellite W-chromosome 585 chrUn_NT_475452v1 3374 3756 CR1-C4 536 + 3374 3756 0 2 53,240, 0,142, +,+, 727774 LINE CR1 585 chrUn_NT_475453v1 2639 3830 GGXHOI 392 - 2639 3830 0 2 1001,136, 0,1055, -,-, 727777 Satellite W-chromosome 585 chrUn_NT_475456v1 279 619 (GCCTG)n 446 + 279 619 0 2 85,79, 0,261, +,+, 727784 Simple_repeat Simple_repeat 585 chrUn_NT_475456v1 513 1317 (CCTTG)n 598 + 513 1317 0 3 171,64,385, 0,355,419, +,+,+, 727786 Simple_repeat Simple_repeat 585 chrUn_NT_475456v1 1382 2750 (CCTTG)n 619 + 1382 2750 0 3 184,284,246, 0,184,1122, +,+,+, 727789 Simple_repeat Simple_repeat 585 chrUn_NT_475456v1 2699 3916 (CCTTG)n 598 + 2699 3916 0 4 172,69,536,217, 0,357,426,1000, +,+,+,+, 727792 Simple_repeat Simple_repeat 585 chrUn_NT_475457v1 1201 3799 GGXHOI 363 - 1201 3799 0 7 419,138,392,544,183,175,586, 0,459,649,1062,1625,1825,2012, -,-,-,-,-,-,-, 727796 Satellite W-chromosome 585 chrUn_NT_475460v1 2598 3913 GGLTR7A 727 - 2598 3913 0 3 113,257,943, 0,114,372, -,-,-, 727807 LTR ERV1 585 chrUn_NT_475464v1 1126 2181 (CCTCG)n 520 + 1126 2181 0 3 495,175,346, 0,521,709, +,+,+, 727821 Simple_repeat Simple_repeat 585 chrUn_NT_475466v1 2543 3909 GGXHOI 391 + 2543 3909 0 3 285,843,172, 0,301,1194, +,+,+, 727839 Satellite W-chromosome 585 chrUn_NT_475467v1 742 2441 (TTAGGG)n 616 + 742 2441 0 7 185,301,177,187,217,165,185, 0,185,518,707,931,1337,1514, +,+,+,+,+,+,+, 727842 Simple_repeat Simple_repeat 585 chrUn_NT_475467v1 2509 2936 (TTAGGG)n 550 + 2509 2936 0 2 185,197, 0,230, +,+, 727845 Simple_repeat Simple_repeat 585 chrUn_NT_475467v1 3015 3486 (TTAGGG)n 558 + 3015 3486 0 2 183,38, 0,433, +,+, 727847 Simple_repeat Simple_repeat 585 chrUn_NT_475467v1 3533 3903 (TTAGGG)n 780 + 3533 3903 0 2 125,30, 0,340, +,+, 727851 Simple_repeat Simple_repeat 585 chrUn_NT_475473v1 763 1336 GGXHOI 385 - 763 1336 0 2 461,95, 0,478, -,-, 727874 Satellite W-chromosome 585 chrUn_NT_475473v1 1468 2904 GGXHOI 399 - 1468 2904 0 2 1155,239, 0,1197, -,-, 727875 Satellite W-chromosome 585 chrUn_NT_475474v1 1584 2990 GGXHOI 321 - 1584 2990 0 3 980,212,163, 0,994,1243, -,-,-, 727880 Satellite W-chromosome 585 chrUn_NT_475474v1 3077 3520 GGXHOI 379 - 3077 3520 0 2 275,147, 0,296, -,-, 727881 Satellite W-chromosome 585 chrUn_NT_475480v1 653 3888 GGXHOI 368 - 653 3888 0 5 128,531,182,2135,155, 0,143,692,934,3080, -,-,-,-,-, 727903 Satellite W-chromosome 585 chrUn_NT_475481v1 2351 2929 (CCTTG)n 687 + 2351 2929 0 3 180,201,197, 0,180,381, +,+,+, 727909 Simple_repeat Simple_repeat 585 chrUn_NT_475481v1 2978 3580 (CCTTG)n 590 + 2978 3580 0 2 402,200, 0,402, +,+, 727911 Simple_repeat Simple_repeat 585 chrUn_NT_475482v1 1419 3893 GGXHOI 577 - 1419 3893 0 3 870,490,526, 0,910,1948, -,-,-, 727917 Satellite W-chromosome 585 chrUn_NT_475483v1 1504 3889 GGXHOI 379 - 1504 3889 0 4 240,960,671,397, 0,258,1259,1988, -,-,-,-, 727920 Satellite W-chromosome 585 chrUn_NT_475487v1 306 2298 (CCTTG)n 635 + 306 2298 0 5 434,290,329,213,175, 0,438,752,1592,1817, +,+,+,+,+, 727933 Simple_repeat Simple_repeat 585 chrUn_NT_475487v1 2373 3450 (CCTTG)n 614 + 2373 3450 0 2 790,116, 0,961, +,+, 727937 Simple_repeat Simple_repeat 585 chrUn_NT_475489v1 1023 1849 (CGAGG)n 576 + 1023 1849 0 2 481,326, 0,500, +,+, 727948 Simple_repeat Simple_repeat 585 chrUn_NT_475489v1 1954 2326 (CGAGG)n 610 + 1954 2326 0 2 115,70, 0,302, +,+, 727950 Simple_repeat Simple_repeat 585 chrUn_NT_475489v1 2069 2628 (CAAGG)n 475 + 2069 2628 0 3 187,151,35, 0,187,524, +,+,+, 727951 Simple_repeat Simple_repeat 585 chrUn_NT_475489v1 2407 2872 (CGAGG)n 641 + 2407 2872 0 2 186,279, 0,186, +,+, 727952 Simple_repeat Simple_repeat 585 chrUn_NT_475489v1 3251 3825 (CGAGG)n 573 + 3251 3825 0 3 115,62,177, 0,300,397, +,+,+, 727955 Simple_repeat Simple_repeat 585 chrUn_NT_475491v1 1581 1917 (CTCTATGGGG)n 496 - 1581 1917 0 2 141,183, 0,153, -,-, 727964 Satellite Satellite 585 chrUn_NT_475491v1 1940 2521 (CTCTATGGGG)n 487 + 1940 2521 0 3 120,250,116, 0,154,465, +,+,+, 727966 Satellite Satellite 585 chrUn_NT_475491v1 2723 2904 (CTCTATGGGG)n 372 + 2723 2904 0 2 98,30, 0,151, +,+, 727969 Satellite Satellite 585 chrUn_NT_475496v1 127 1987 CR1-H 682 - 127 1987 0 2 1701,152, 0,1708, -,-, 727987 LINE CR1 585 chrUn_NT_475501v1 2729 2872 GA-rich 272 + 2729 2872 0 2 28,55, 0,88, +,+, 728006 Low_complexity Low_complexity 585 chrUn_NT_475503v1 1997 3873 GGXHOI 542 - 1997 3873 0 2 935,203, 0,1673, -,-, 728017 Satellite W-chromosome 585 chrUn_NT_475507v1 3158 3869 GGXHOI 321 + 3158 3869 0 2 189,482, 0,229, +,+, 728028 Satellite W-chromosome 585 chrUn_NT_475512v1 539 1029 GGXHOI 550 - 539 1029 0 2 16,152, 0,338, -,-, 728045 Satellite W-chromosome 585 chrUn_NT_475512v1 1119 3305 GGXHOI 520 - 1119 3305 0 4 128,308,290,677, 0,330,889,1509, -,-,-,-, 728047 Satellite W-chromosome 585 chrUn_NT_475512v1 3433 3860 GGXHOI 430 - 3433 3860 0 2 153,227, 0,200, -,-, 728051 Satellite W-chromosome 585 chrUn_NT_475514v1 1516 2323 (ACCCCATAGGG)n 399 + 1516 2323 0 4 140,329,126,135, 0,167,519,672, +,+,+,+, 728060 Satellite Satellite 585 chrUn_NT_475514v1 2590 2862 (ACCCCATAGGG)n 532 + 2590 2862 0 2 116,114, 0,158, +,+, 728062 Satellite Satellite 585 chrUn_NT_475515v1 597 741 (CCATC)n 488 + 597 741 0 2 16,15, 0,129, +,+, 728067 Simple_repeat Simple_repeat 585 chrUn_NT_475515v1 926 1102 (CCCCAT)n 578 + 926 1102 0 2 26,64, 0,112, +,+, 728070 Simple_repeat Simple_repeat 585 chrUn_NT_475515v1 1372 1774 (GGATG)n 581 + 1372 1774 0 2 193,175, 0,227, +,+, 728074 Simple_repeat Simple_repeat 585 chrUn_NT_475517v1 814 3831 GGXHOI 413 - 814 3831 0 3 642,1483,855, 0,664,2162, -,-,-, 728085 Satellite W-chromosome 585 chrUn_NT_475518v1 1212 1477 (ACCCATAGAG)n 743 - 1212 1477 0 2 114,151, 0,114, -,-, 728092 Satellite Satellite 585 chrUn_NT_475518v1 1635 2081 (ACCCATAGAG)n 722 - 1635 2081 0 2 307,19, 0,427, -,-, 728095 Satellite Satellite 585 chrUn_NT_475518v1 2254 3264 (ACCCATAGAG)n 698 - 2254 3264 0 3 191,299,302, 0,287,708, -,-,-, 728098 Satellite Satellite 585 chrUn_NT_475520v1 1382 1947 CR1-H 705 + 1382 1947 0 2 137,243, 0,322, +,+, 728114 LINE CR1 585 chrUn_NT_475521v1 641 1860 (TTAGGG)n 605 + 641 1860 0 4 109,21,124,396, 0,311,699,823, +,+,+,+, 728118 Simple_repeat Simple_repeat 585 chrUn_NT_475521v1 1872 3350 (TTAGGG)n 617 + 1872 3350 0 2 956,504, 0,974, +,+, 728123 Simple_repeat Simple_repeat 585 chrUn_NT_475521v1 3369 3853 (TTAGGG)n 513 + 3369 3853 0 2 195,242, 0,242, +,+, 728125 Simple_repeat Simple_repeat 585 chrUn_NT_475523v1 3490 3853 GGLTR3F2 612 + 3490 3853 0 2 231,88, 0,275, +,+, 728130 LTR ERVL 585 chrUn_NT_475524v1 2901 3562 GGXHOI 407 + 2901 3562 0 2 470,165, 0,496, +,+, 728135 Satellite W-chromosome 585 chrUn_NT_475525v1 1352 1659 (CTCTATGGGG)n 624 - 1352 1659 0 2 150,157, 0,150, -,-, 728141 Satellite Satellite 585 chrUn_NT_475525v1 2405 3017 (ACCCATAGAG)n 702 - 2405 3017 0 2 292,320, 0,292, -,-, 728145 Satellite Satellite 585 chrUn_NT_475525v1 3255 3848 (ACCCATAGAG)n 688 - 3255 3848 0 4 146,29,128,119, 0,259,326,474, -,-,-,-, 728147 Satellite Satellite 585 chrUn_NT_475530v1 1914 3724 GGXHOI 343 - 1914 3724 0 3 229,573,941, 0,285,869, -,-,-, 728164 Satellite W-chromosome 585 chrUn_NT_475537v1 674 2475 (CGAGG)n 503 + 674 2475 0 3 180,187,1372, 0,218,429, +,+,+, 728204 Simple_repeat Simple_repeat 585 chrUn_NT_475538v1 1681 3586 GGLTR7-int 650 - 1681 3586 0 2 33,1266, 0,639, -,-, 728214 LTR ERV1 585 chrUn_NT_475539v1 1410 3757 CR1-F 499 - 1410 3757 0 7 208,197,156,203,202,202,201, 0,254,737,1159,1404,1648,2146, -,-,-,-,-,-,-, 728219 LINE CR1 585 chrUn_NT_475540v1 2919 3223 (ACCCATAGGG)n 497 - 2919 3223 0 2 118,147, 0,157, -,-, 728225 Satellite Satellite 585 chrUn_NT_475545v1 608 3747 GGXHOI 379 + 608 3747 0 9 345,235,136,300,298,233,130,352,846, 0,360,646,827,1190,1504,1748,1896,2293, +,+,+,+,+,+,+,+,+, 728245 Satellite W-chromosome 585 chrUn_NT_475553v1 1846 2414 CR1-B2 543 + 1846 2414 0 3 47,62,63, 0,362,505, +,+,+, 728295 LINE CR1 585 chrUn_NT_475557v1 3156 3811 GGXHOI 342 + 3156 3811 0 2 259,338, 0,317, +,+, 728313 Satellite W-chromosome 585 chrUn_NT_475559v1 602 3822 GGXHOI 570 + 602 3822 0 2 1472,1426, 0,1794, +,+, 728317 Satellite W-chromosome 585 chrUn_NT_475566v1 1041 1514 (CGAGG)n 567 + 1041 1514 0 2 264,188, 0,285, +,+, 728350 Simple_repeat Simple_repeat 585 chrUn_NT_475566v1 2601 2978 (CGAGG)n 508 + 2601 2978 0 2 183,181, 0,196, +,+, 728356 Simple_repeat Simple_repeat 585 chrUn_NT_475566v1 3173 3547 (CGAGG)n 420 + 3173 3547 0 2 173,186, 0,188, +,+, 728358 Simple_repeat Simple_repeat 585 chrUn_NT_475567v1 2505 3555 GGXHOI 390 + 2505 3555 0 2 472,515, 0,535, +,+, 728361 Satellite W-chromosome 585 chrUn_NT_475574v1 521 2421 GGXHOI 410 + 521 2421 0 3 553,933,345, 0,591,1555, +,+,+, 728379 Satellite W-chromosome 585 chrUn_NT_475574v1 2497 3037 GGXHOI 355 + 2497 3037 0 2 132,375, 0,165, +,+, 728380 Satellite W-chromosome 585 chrUn_NT_475575v1 3073 3433 (CAAGG)n 604 + 3073 3433 0 2 164,179, 0,181, +,+, 728387 Simple_repeat Simple_repeat 585 chrUn_NT_475578v1 1525 3774 Sat-CR1_GG 154 - 1525 3774 0 3 854,45,538, 0,1506,1711, -,-,-, 728403 Satellite Satellite 585 chrUn_NT_475580v1 1061 2721 GGXHOI 378 - 1061 2721 0 4 324,420,628,215, 0,343,802,1445, -,-,-,-, 728409 Satellite W-chromosome 585 chrUn_NT_475580v1 2963 3811 GGXHOI 405 - 2963 3811 0 3 418,139,227, 0,437,621, -,-,-, 728410 Satellite W-chromosome 585 chrUn_NT_475581v1 3158 3768 (CCTTG)n 460 + 3158 3768 0 2 341,76, 0,534, +,+, 728417 Simple_repeat Simple_repeat 585 chrUn_NT_475582v1 547 764 (CTCTATGGGG)n 710 - 547 764 0 2 85,16, 0,201, -,-, 728423 Satellite Satellite 585 chrUn_NT_475582v1 836 1274 (CTCTATGGGG)n 640 + 836 1274 0 2 163,275, 0,163, +,+, 728425 Satellite Satellite 585 chrUn_NT_475582v1 1743 1981 (ACCCCATAGGG)n 560 + 1743 1981 0 2 53,62, 0,176, +,+, 728429 Satellite Satellite 585 chrUn_NT_475582v1 2454 3079 (CTCTATGGGG)n 697 - 2454 3079 0 3 76,25,344, 0,193,281, -,-,-, 728434 Satellite Satellite 585 chrUn_NT_475583v1 975 1658 GGXHOI 348 - 975 1658 0 2 393,275, 0,408, -,-, 728442 Satellite W-chromosome 585 chrUn_NT_475583v1 1757 3793 GGXHOI 336 - 1757 3793 0 4 428,133,1212,141, 0,475,622,1895, -,-,-,-, 728443 Satellite W-chromosome 585 chrUn_NT_475587v1 2837 3770 (TTAGGG)n 665 + 2837 3770 0 4 360,134,28,173, 0,391,719,760, +,+,+,+, 728471 Simple_repeat Simple_repeat 585 chrUn_NT_475589v1 1111 3529 GGERV10_LTR 848 - 1111 3529 0 2 38,40, 0,2378, -,-, 728476 LTR ERVL 585 chrUn_NT_475589v1 1278 3488 GGLTR10D-int 939 - 1278 3488 0 2 362,1845, 0,365, -,-, 728477 LTR ERVK 585 chrUn_NT_475590v1 444 900 (CAAGG)n 634 + 444 900 0 2 46,410, 0,46, +,+, 728483 Simple_repeat Simple_repeat 585 chrUn_NT_475590v1 899 1300 (CCTTG)n 561 + 899 1300 0 2 206,195, 0,206, +,+, 728484 Simple_repeat Simple_repeat 585 chrUn_NT_475590v1 2221 2758 (CAAGG)n 591 + 2221 2758 0 3 46,223,242, 0,46,295, +,+,+, 728490 Simple_repeat Simple_repeat 585 chrUn_NT_475590v1 3014 3753 (CAAGG)n 507 + 3014 3753 0 2 471,268, 0,471, +,+, 728493 Simple_repeat Simple_repeat 585 chrUn_NT_475591v1 3020 3360 GGXHOI 271 + 3020 3360 0 2 123,168, 0,172, +,+, 728497 Satellite W-chromosome 585 chrUn_NT_475592v1 1107 2501 (CGAGG)n 478 + 1107 2501 0 4 412,340,373,185, 0,423,785,1209, +,+,+,+, 728503 Simple_repeat Simple_repeat 585 chrUn_NT_475598v1 1377 3796 GGXHOI 423 - 1377 3796 0 7 175,117,779,169,514,176,316, 0,236,391,1194,1378,1916,2103, -,-,-,-,-,-,-, 728522 Satellite W-chromosome 585 chrUn_NT_475599v1 1564 3742 GGXHOI 393 - 1564 3742 0 4 969,277,541,313, 0,1024,1312,1865, -,-,-,-, 728524 Satellite W-chromosome 585 chrUn_NT_475600v1 509 1142 (CATTG)n 562 + 509 1142 0 2 163,252, 0,381, +,+, 728529 Simple_repeat Simple_repeat 585 chrUn_NT_475601v1 811 1227 (GCCCCACAGCT)n 381 - 811 1227 0 2 137,267, 0,149, -,-, 728537 Satellite Satellite 585 chrUn_NT_475601v1 1310 1851 (GCCCCACAGCT)n 403 + 1310 1851 0 3 169,38,192, 0,299,349, +,+,+, 728539 Satellite Satellite 585 chrUn_NT_475602v1 3129 3778 GGXHOI 436 + 3129 3778 0 2 282,348, 0,301, +,+, 728548 Satellite W-chromosome 585 chrUn_NT_475604v1 1703 2763 (CTCTATGGGG)n 487 - 1703 2763 0 3 41,139,133, 0,788,927, -,-,-, 728558 Satellite Satellite 585 chrUn_NT_475604v1 1965 2358 (CTCTATGGGG)n 665 - 1965 2358 0 2 154,185, 0,208, -,-, 728561 Satellite Satellite 585 chrUn_NT_475604v1 2918 3315 (CTCTATGGGG)n 694 - 2918 3315 0 2 217,58, 0,339, -,-, 728563 Satellite Satellite 585 chrUn_NT_475605v1 1840 2681 (TTAGGG)n 684 + 1840 2681 0 2 163,478, 0,363, +,+, 728572 Simple_repeat Simple_repeat 585 chrUn_NT_475605v1 2767 3792 (TTAGGG)n 583 + 2767 3792 0 4 178,182,151,246, 0,201,427,779, +,+,+,+, 728575 Simple_repeat Simple_repeat 585 chrUn_NT_475606v1 2055 2601 (CATTG)n 388 + 2055 2601 0 2 178,53, 0,493, +,+, 728580 Simple_repeat Simple_repeat 585 chrUn_NT_475606v1 2233 2548 (CTGTG)n 322 + 2233 2548 0 2 93,37, 0,278, +,+, 728581 Simple_repeat Simple_repeat 585 chrUn_NT_475606v1 2819 3170 (CACTG)n 346 + 2819 3170 0 2 100,69, 0,282, +,+, 728588 Simple_repeat Simple_repeat 585 chrUn_NT_475607v1 888 1500 GGXHOI 616 + 888 1500 0 2 280,13, 0,599, +,+, 728592 Satellite W-chromosome 585 chrUn_NT_475607v1 1653 3789 GGXHOI 516 + 1653 3789 0 5 596,402,100,183,20, 0,628,1344,1733,2116, +,+,+,+,+, 728594 Satellite W-chromosome 585 chrUn_NT_475609v1 2507 3570 GGXHOI 528 + 2507 3570 0 2 282,461, 0,602, +,+, 728608 Satellite W-chromosome 585 chrUn_NT_475610v1 3051 3748 GGXHOI 380 - 3051 3748 0 2 476,172, 0,525, -,-, 728611 Satellite W-chromosome 585 chrUn_NT_475613v1 2437 3776 GGXHOI 422 - 2437 3776 0 3 535,472,293, 0,555,1046, -,-,-, 728636 Satellite W-chromosome 585 chrUn_NT_475614v1 289 406 CR1-C3 705 - 289 406 0 2 49,41, 0,76, -,-, 728639 LINE CR1 585 chrUn_NT_475615v1 269 1236 GGXHOI 413 - 269 1236 0 4 195,209,140,346, 0,213,438,621, -,-,-,-, 728650 Satellite W-chromosome 585 chrUn_NT_475615v1 1315 3167 GGXHOI 320 - 1315 3167 0 4 423,539,632,135, 0,439,1025,1717, -,-,-,-, 728651 Satellite W-chromosome 585 chrUn_NT_475617v1 1412 3770 GGXHOI 406 - 1412 3770 0 4 747,126,604,831, 0,763,904,1527, -,-,-,-, 728663 Satellite W-chromosome 585 chrUn_NT_475618v1 958 3387 GGXHOI 376 + 958 3387 0 3 1211,132,1029, 0,1222,1400, +,+,+, 728665 Satellite W-chromosome 585 chrUn_NT_475621v1 1671 3525 GGXHOI 371 - 1671 3525 0 4 830,320,123,513, 0,846,1178,1341, -,-,-,-, 728671 Satellite W-chromosome 585 chrUn_NT_475623v1 2126 3766 GGXHOI 341 - 2126 3766 0 2 621,1003, 0,637, -,-, 728675 Satellite W-chromosome 585 chrUn_NT_475625v1 1449 3777 GGERV10_LTR 897 - 1449 3777 0 3 53,121,2141, 0,66,187, -,-,-, 728679 LTR ERVL 585 chrUn_NT_475627v1 366 1465 (CGAGG)n 616 + 366 1465 0 3 636,78,186, 0,824,913, +,+,+, 728690 Simple_repeat Simple_repeat 585 chrUn_NT_475627v1 1467 1818 (CAAGG)n 554 + 1467 1818 0 2 95,72, 0,279, +,+, 728693 Simple_repeat Simple_repeat 585 chrUn_NT_475627v1 1827 3729 (CGAGG)n 607 + 1827 3729 0 4 965,280,111,170, 0,977,1439,1732, +,+,+,+, 728695 Simple_repeat Simple_repeat 585 chrUn_NT_475628v1 1892 2003 GGLTR7A 778 + 1892 2003 0 2 53,47, 0,64, +,+, 728700 LTR ERV1 585 chrUn_NT_475629v1 857 1755 GGXHOI 344 + 857 1755 0 2 424,456, 0,442, +,+, 728703 Satellite W-chromosome 585 chrUn_NT_475632v1 316 3184 (TTAGGG)n 658 + 316 3184 0 10 307,209,125,183,474,21,12,23,188,275, 0,332,718,857,1058,1766,1965,2154,2204,2593, +,+,+,+,+,+,+,+,+,+, 728720 Simple_repeat Simple_repeat 585 chrUn_NT_475632v1 3443 3773 (TTAGGG)n 723 + 3443 3773 0 2 274,44, 0,286, +,+, 728729 Simple_repeat Simple_repeat 585 chrUn_NT_475634v1 1010 2900 GGXHOI 355 + 1010 2900 0 3 391,592,868, 0,414,1022, +,+,+, 728732 Satellite W-chromosome 585 chrUn_NT_475635v1 3195 3770 CR1-H 674 + 3195 3770 0 2 478,95, 0,480, +,+, 728736 LINE CR1 585 chrUn_NT_475636v1 73 3345 GGLTR7-int 762 - 73 3345 0 3 961,1887,175, 0,1203,3097, -,-,-, 728738 LTR ERV1 585 chrUn_NT_475639v1 794 2270 GGXHOI 346 - 794 2270 0 4 198,575,380,206, 0,248,841,1270, -,-,-,-, 728748 Satellite W-chromosome 585 chrUn_NT_475639v1 2378 3766 GGXHOI 356 - 2378 3766 0 6 128,146,140,322,285,184, 0,146,355,538,903,1204, -,-,-,-,-,-, 728749 Satellite W-chromosome 585 chrUn_NT_475640v1 1085 3757 GGXHOI 564 - 1085 3757 0 2 590,24, 0,2648, -,-, 728754 Satellite W-chromosome 585 chrUn_NT_475641v1 601 1071 GGXHOI 249 + 601 1071 0 2 183,252, 0,218, +,+, 728757 Satellite W-chromosome 585 chrUn_NT_475641v1 2727 3765 GGXHOI 408 + 2727 3765 0 4 134,297,170,331, 0,173,520,707, +,+,+,+, 728759 Satellite W-chromosome 585 chrUn_NT_475644v1 1500 3753 GGXHOI 408 - 1500 3753 0 4 107,815,538,728, 0,123,954,1525, -,-,-,-, 728771 Satellite W-chromosome 585 chrUn_NT_475649v1 1928 2299 (CGAGG)n 575 + 1928 2299 0 2 172,180, 0,191, +,+, 728799 Simple_repeat Simple_repeat 585 chrUn_NT_475649v1 2368 2905 (CGAGG)n 553 + 2368 2905 0 2 178,341, 0,196, +,+, 728800 Simple_repeat Simple_repeat 585 chrUn_NT_475649v1 2978 3736 (CGAGG)n 522 + 2978 3736 0 4 177,183,177,125, 0,217,433,633, +,+,+,+, 728802 Simple_repeat Simple_repeat 585 chrUn_NT_475652v1 1304 2827 (CAAGG)n 625 + 1304 2827 0 7 242,89,217,200,181,171,26, 0,427,516,733,946,1127,1497, +,+,+,+,+,+,+, 728809 Simple_repeat Simple_repeat 585 chrUn_NT_475652v1 2931 3703 (CAAGG)n 603 + 2931 3703 0 2 226,541, 0,231, +,+, 728813 Simple_repeat Simple_repeat 585 chrUn_NT_475655v1 790 1451 GGXHOI 402 + 790 1451 0 3 170,163,228, 0,223,433, +,+,+, 728819 Satellite W-chromosome 585 chrUn_NT_475655v1 1554 2269 GGXHOI 409 + 1554 2269 0 3 128,136,422, 0,145,293, +,+,+, 728820 Satellite W-chromosome 585 chrUn_NT_475655v1 2338 3736 GGXHOI 358 + 2338 3736 0 2 209,1139, 0,259, +,+, 728821 Satellite W-chromosome 585 chrUn_NT_475656v1 207 3515 GGXHOI 389 + 207 3515 0 5 1275,265,1152,145,378, 0,1290,1567,2737,2930, +,+,+,+,+, 728823 Satellite W-chromosome 585 chrUn_NT_475657v1 517 1099 (GCCCCACAGCT)n 675 - 517 1099 0 4 130,127,127,129, 0,173,313,453, -,-,-,-, 728826 Satellite Satellite 585 chrUn_NT_475657v1 1177 2975 (GCCCCACAGCT)n 660 - 1177 2975 0 6 130,130,373,575,129,275, 0,193,335,738,1365,1523, -,-,-,-,-,-, 728827 Satellite Satellite 585 chrUn_NT_475657v1 3058 3330 (GCCCCACAGCT)n 620 - 3058 3330 0 2 135,120, 0,152, -,-, 728828 Satellite Satellite 585 chrUn_NT_475658v1 11 1518 GGXHOI 566 + 11 1518 0 2 739,364, 0,1143, +,+, 728832 Satellite W-chromosome 585 chrUn_NT_475658v1 1611 3536 GGXHOI 578 + 1611 3536 0 5 116,30,194,370,194, 0,170,522,1040,1731, +,+,+,+,+, 728834 Satellite W-chromosome 585 chrUn_NT_475663v1 427 2197 GGXHOI 363 - 427 2197 0 7 169,401,83,183,413,138,256, 0,180,600,701,901,1361,1514, -,-,-,-,-,-,-, 728866 Satellite W-chromosome 585 chrUn_NT_475663v1 2618 3227 GGXHOI 437 - 2618 3227 0 2 182,414, 0,195, -,-, 728868 Satellite W-chromosome 585 chrUn_NT_475665v1 970 2581 GGXHOI 357 - 970 2581 0 2 510,1038, 0,573, -,-, 728873 Satellite W-chromosome 585 chrUn_NT_475665v1 2673 3564 GGXHOI 314 - 2673 3564 0 2 613,263, 0,628, -,-, 728874 Satellite W-chromosome 585 chrUn_NT_475666v1 2820 3445 CR1-H 669 - 2820 3445 0 2 143,476, 0,149, -,-, 728878 LINE CR1 585 chrUn_NT_475667v1 328 1250 (CGAGG)n 496 + 328 1250 0 2 389,472, 0,450, +,+, 728881 Simple_repeat Simple_repeat 585 chrUn_NT_475669v1 180 610 (ACCCCATAGGG)n 294 - 180 610 0 2 118,280, 0,150, -,-, 728898 Satellite Satellite 585 chrUn_NT_475669v1 1289 1830 (ACCCCATAGGG)n 309 - 1289 1830 0 2 334,175, 0,366, -,-, 728903 Satellite Satellite 585 chrUn_NT_475669v1 2744 3255 (ACCCATAGAG)n 458 - 2744 3255 0 4 101,105,93,106, 0,138,278,405, -,-,-,-, 728909 Satellite Satellite 585 chrUn_NT_475675v1 757 1005 GGXHOI 398 + 757 1005 0 2 13,106, 0,142, +,+, 728947 Satellite W-chromosome 585 chrUn_NT_475675v1 1657 2225 Sat-CR1_GG 164 - 1657 2225 0 2 169,193, 0,375, -,-, 728951 Satellite Satellite 585 chrUn_NT_475675v1 3213 3642 Sat-CR1_GG 162 - 3213 3642 0 2 24,162, 0,267, -,-, 728955 Satellite Satellite 585 chrUn_NT_475676v1 1395 3740 GGXHOI 421 - 1395 3740 0 2 2165,162, 0,2183, -,-, 728958 Satellite W-chromosome 585 chrUn_NT_475680v1 1708 3189 GGXHOI 289 + 1708 3189 0 2 886,540, 0,941, +,+, 728968 Satellite W-chromosome 585 chrUn_NT_475681v1 2142 2427 (CCCCATTGGG)n 381 - 2142 2427 0 2 123,128, 0,157, -,-, 728971 Satellite Satellite 585 chrUn_NT_475684v1 1255 1865 GGXHOI 449 - 1255 1865 0 3 177,142,227, 0,190,383, -,-,-, 728980 Satellite W-chromosome 585 chrUn_NT_475684v1 1975 3730 GGXHOI 356 - 1975 3730 0 5 387,203,139,252,626, 0,402,651,829,1129, -,-,-,-,-, 728981 Satellite W-chromosome 585 chrUn_NT_475688v1 1113 2046 (CGAGG)n 460 + 1113 2046 0 3 176,149,505, 0,235,428, +,+,+, 728989 Simple_repeat Simple_repeat 585 chrUn_NT_475688v1 2166 2777 (CGAGG)n 458 + 2166 2777 0 3 171,238,175, 0,182,436, +,+,+, 728990 Simple_repeat Simple_repeat 585 chrUn_NT_475688v1 3275 3691 (CGAGG)n 431 + 3275 3691 0 2 177,185, 0,231, +,+, 728994 Simple_repeat Simple_repeat 585 chrUn_NT_475689v1 1193 1335 (GTTCTTTCC)n 952 + 1193 1335 0 2 43,52, 0,90, +,+, 729000 Simple_repeat Simple_repeat 585 chrUn_NT_475689v1 2991 3137 (GTTCTTTCC)n 905 + 2991 3137 0 2 44,44, 0,102, +,+, 729008 Simple_repeat Simple_repeat 585 chrUn_NT_475690v1 842 3738 GGXHOI 332 + 842 3738 0 3 26,411,2396, 0,58,500, +,+,+, 729010 Satellite W-chromosome 585 chrUn_NT_475691v1 1129 1483 (GCCCCACAGCT)n 572 - 1129 1483 0 2 166,66, 0,288, -,-, 729017 Satellite Satellite 585 chrUn_NT_475692v1 265 686 (TTAGGG)n 681 + 265 686 0 2 217,204, 0,217, +,+, 729023 Simple_repeat Simple_repeat 585 chrUn_NT_475692v1 756 2881 (TTAGGG)n 618 + 756 2881 0 6 181,274,188,384,438,405, 0,203,654,853,1271,1720, +,+,+,+,+,+, 729025 Simple_repeat Simple_repeat 585 chrUn_NT_475692v1 2985 3726 (TTAGGG)n 767 + 2985 3726 0 2 385,356, 0,385, +,+, 729028 Simple_repeat Simple_repeat 585 chrUn_NT_475695v1 3136 3706 GGXHOI 394 - 3136 3706 0 2 252,306, 0,264, -,-, 729035 Satellite W-chromosome 585 chrUn_NT_475697v1 310 1345 GGXHOI 353 + 310 1345 0 2 187,833, 0,202, +,+, 729040 Satellite W-chromosome 585 chrUn_NT_475712v1 1199 1674 GGXHOI 240 - 1199 1674 0 2 286,144, 0,331, -,-, 729105 Satellite W-chromosome 585 chrUn_NT_475712v1 1817 3132 GGXHOI 462 - 1817 3132 0 2 147,1149, 0,166, -,-, 729106 Satellite W-chromosome 585 chrUn_NT_475712v1 3291 3701 GGXHOI 345 - 3291 3701 0 2 235,141, 0,269, -,-, 729107 Satellite W-chromosome 585 chrUn_NT_475716v1 736 2084 GGLTR7-int 330 + 736 2084 0 3 99,233,280, 0,125,1068, +,+,+, 729119 LTR ERV1 585 chrUn_NT_475716v1 3575 3692 (ATGGCT)n 376 + 3575 3692 0 2 52,25, 0,92, +,+, 729121 Simple_repeat Simple_repeat 585 chrUn_NT_475718v1 1130 3709 GGXHOI 413 - 1130 3709 0 4 1210,144,445,722, 0,1222,1382,1857, -,-,-,-, 729132 Satellite W-chromosome 585 chrUn_NT_475720v1 2898 3409 GGXHOI 331 + 2898 3409 0 2 153,346, 0,165, +,+, 729155 Satellite W-chromosome 585 chrUn_NT_475721v1 1338 2273 GGXHOI 360 - 1338 2273 0 2 169,751, 0,184, -,-, 729158 Satellite W-chromosome 585 chrUn_NT_475724v1 2170 2663 GGXHOI 308 + 2170 2663 0 2 295,181, 0,312, +,+, 729169 Satellite W-chromosome 585 chrUn_NT_475728v1 66 876 (CCTTG)n 614 + 66 876 0 2 110,148, 0,662, +,+, 729181 Simple_repeat Simple_repeat 585 chrUn_NT_475728v1 1246 2051 (CCTTG)n 635 + 1246 2051 0 3 227,172,171, 0,272,634, +,+,+, 729188 Simple_repeat Simple_repeat 585 chrUn_NT_475728v1 1947 2369 (GCCTG)n 564 + 1947 2369 0 2 208,31, 0,391, +,+, 729190 Simple_repeat Simple_repeat 585 chrUn_NT_475728v1 2951 3668 (CCTTG)n 612 + 2951 3668 0 2 267,271, 0,446, +,+, 729194 Simple_repeat Simple_repeat 585 chrUn_NT_475730v1 1753 2073 (CTCTATGGGG)n 674 - 1753 2073 0 2 150,160, 0,160, -,-, 729203 Satellite Satellite 585 chrUn_NT_475730v1 2255 2666 (CTCTATGGGG)n 615 - 2255 2666 0 2 158,220, 0,191, -,-, 729206 Satellite Satellite 585 chrUn_NT_475731v1 1342 2998 GGXHOI 385 + 1342 2998 0 3 884,429,263, 0,947,1393, +,+,+, 729214 Satellite W-chromosome 585 chrUn_NT_475732v1 1002 1645 (CAAGG)n 489 + 1002 1645 0 3 227,135,155, 0,334,488, +,+,+, 729219 Simple_repeat Simple_repeat 585 chrUn_NT_475732v1 1698 1918 (CAAGG)n 453 + 1698 1918 0 2 24,171, 0,49, +,+, 729222 Simple_repeat Simple_repeat 585 chrUn_NT_475732v1 1966 2615 (CCTTG)n 527 + 1966 2615 0 2 259,373, 0,276, +,+, 729223 Simple_repeat Simple_repeat 585 chrUn_NT_475734v1 1616 3247 GGXHOI 522 + 1616 3247 0 3 64,458,470, 0,285,1161, +,+,+, 729242 Satellite W-chromosome 585 chrUn_NT_475734v1 3279 3689 GGXHOI 572 + 3279 3689 0 2 317,52, 0,358, +,+, 729246 Satellite W-chromosome 585 chrUn_NT_475735v1 2595 2861 (CCCCATTGGG)n 491 + 2595 2861 0 2 110,109, 0,157, +,+, 729250 Satellite Satellite 585 chrUn_NT_475736v1 98 262 (TAACCC)n 354 + 98 262 0 2 72,55, 0,109, +,+, 729255 Simple_repeat Simple_repeat 585 chrUn_NT_475736v1 2792 3688 GGXHOI 300 + 2792 3688 0 2 150,731, 0,165, +,+, 729259 Satellite W-chromosome 585 chrUn_NT_475737v1 427 2291 GGLTR7-int 620 - 427 2291 0 3 74,641,524, 0,699,1340, -,-,-, 729262 LTR ERV1 585 chrUn_NT_475738v1 1129 3682 GGXHOI 570 - 1129 3682 0 2 1485,833, 0,1720, -,-, 729266 Satellite W-chromosome 585 chrUn_NT_475741v1 74 1082 (CCCTAA)n 571 + 74 1082 0 3 537,262,172, 0,554,836, +,+,+, 729273 Simple_repeat Simple_repeat 585 chrUn_NT_475741v1 2503 3668 (CCCTAA)n 591 + 2503 3668 0 3 395,548,173, 0,427,992, +,+,+, 729280 Simple_repeat Simple_repeat 585 chrUn_NT_475742v1 1232 1463 (CTCTATGGGG)n 439 + 1232 1463 0 2 123,84, 0,147, +,+, 729288 Satellite Satellite 585 chrUn_NT_475742v1 1804 2043 (CTCTATGGGG)n 460 + 1804 2043 0 2 108,114, 0,125, +,+, 729291 Satellite Satellite 585 chrUn_NT_475744v1 1575 1961 (ACCCCATAGGG)n 351 + 1575 1961 0 3 113,108,140, 0,124,246, +,+,+, 729305 Satellite Satellite 585 chrUn_NT_475744v1 2049 2484 (ACCCCATAGGG)n 333 + 2049 2484 0 3 113,134,141, 0,134,294, +,+,+, 729306 Satellite Satellite 585 chrUn_NT_475746v1 2979 3249 (ACCCATAGGG)n 492 - 2979 3249 0 2 103,45, 0,225, -,-, 729320 Satellite Satellite 585 chrUn_NT_475748v1 550 1017 GGLTR3F2 742 - 550 1017 0 2 198,229, 0,238, -,-, 729329 LTR ERVL 585 chrUn_NT_475748v1 1394 2560 GGERVL-B-int 800 - 1394 2560 0 3 358,83,45, 0,360,1121, -,-,-, 729331 LTR ERVL 585 chrUn_NT_475748v1 2560 3659 ENS3-int 825 + 2560 3659 0 2 826,271, 0,828, +,+, 729334 LTR ERVL 585 chrUn_NT_475749v1 2577 3635 (TTAGGG)n 612 + 2577 3635 0 2 594,437, 0,621, +,+, 729337 Simple_repeat Simple_repeat 585 chrUn_NT_475752v1 2334 3468 GGXHOI 301 + 2334 3468 0 2 832,244, 0,890, +,+, 729351 Satellite W-chromosome 585 chrUn_NT_475753v1 1031 3659 GGXHOI 361 + 1031 3659 0 6 132,171,532,234,1344,73, 0,155,342,911,1193,2555, +,+,+,+,+,+, 729354 Satellite W-chromosome 585 chrUn_NT_475754v1 3216 3540 (ACCCCATAGGG)n 504 - 3216 3540 0 2 133,146, 0,178, -,-, 729357 Satellite Satellite 585 chrUn_NT_475755v1 2237 3435 (CCTCG)n 541 + 2237 3435 0 4 180,204,217,76, 0,198,760,1122, +,+,+,+, 729362 Simple_repeat Simple_repeat 585 chrUn_NT_475756v1 285 3431 GGXHOI 356 - 285 3431 0 6 356,311,262,1317,639,165, 0,374,700,973,2304,2981, -,-,-,-,-,-, 729370 Satellite W-chromosome 585 chrUn_NT_475760v1 1838 3314 GGXHOI 562 - 1838 3314 0 2 156,449, 0,1027, -,-, 729400 Satellite W-chromosome 585 chrUn_NT_475762v1 272 1283 GGXHOI 373 - 272 1283 0 2 517,476, 0,535, -,-, 729412 Satellite W-chromosome 585 chrUn_NT_475770v1 101 615 (CCTTG)n 560 + 101 615 0 2 312,185, 0,329, +,+, 729435 Simple_repeat Simple_repeat 585 chrUn_NT_475770v1 574 942 (GCCTG)n 422 + 574 942 0 2 108,81, 0,287, +,+, 729436 Simple_repeat Simple_repeat 585 chrUn_NT_475770v1 1550 2055 (GCCTG)n 498 + 1550 2055 0 2 154,173, 0,332, +,+, 729441 Simple_repeat Simple_repeat 585 chrUn_NT_475770v1 2214 2670 (CCTTG)n 672 + 2214 2670 0 2 189,267, 0,189, +,+, 729445 Simple_repeat Simple_repeat 585 chrUn_NT_475770v1 2705 3079 (CCTTG)n 620 + 2705 3079 0 2 116,74, 0,300, +,+, 729447 Simple_repeat Simple_repeat 585 chrUn_NT_475771v1 2263 3277 (ACCCCATAGGG)n 546 + 2263 3277 0 2 499,19, 0,995, +,+, 729457 Satellite Satellite 585 chrUn_NT_475777v1 1804 2840 GGXHOI 368 - 1804 2840 0 2 505,470, 0,566, -,-, 729487 Satellite W-chromosome 585 chrUn_NT_475784v1 1885 1959 (G)n 955 + 1885 1959 0 2 17,23, 0,51, +,+, 729501 Simple_repeat Simple_repeat 585 chrUn_NT_475789v1 1835 3648 GGXHOI 518 - 1835 3648 0 2 747,869, 0,944, -,-, 729528 Satellite W-chromosome 585 chrUn_NT_475794v1 2370 2696 (CGAGG)n 622 + 2370 2696 0 2 93,54, 0,272, +,+, 729538 Simple_repeat Simple_repeat 585 chrUn_NT_475794v1 2775 3518 GGXHOI 404 - 2775 3518 0 2 541,143, 0,600, -,-, 729540 Satellite W-chromosome 585 chrUn_NT_475795v1 2777 3081 CR1-X 517 + 2777 3081 0 3 167,78,50, 0,167,254, +,+,+, 729544 LINE CR1 585 chrUn_NT_475796v1 530 1867 (CGAGG)n 494 + 530 1867 0 2 350,947, 0,390, +,+, 729549 Simple_repeat Simple_repeat 585 chrUn_NT_475796v1 1910 3398 (CGAGG)n 485 + 1910 3398 0 4 23,412,635,209, 0,39,464,1279, +,+,+,+, 729551 Simple_repeat Simple_repeat 585 chrUn_NT_475797v1 2192 2958 (CGAGG)n 542 + 2192 2958 0 2 181,574, 0,192, +,+, 729557 Simple_repeat Simple_repeat 585 chrUn_NT_475800v1 902 2407 GGXHOI 356 - 902 2407 0 3 705,133,609, 0,746,896, -,-,-, 729564 Satellite W-chromosome 585 chrUn_NT_475807v1 541 1214 GGXHOI 409 - 541 1214 0 3 311,141,181, 0,332,492, -,-,-, 729576 Satellite W-chromosome 585 chrUn_NT_475807v1 1671 2346 GGXHOI 417 - 1671 2346 0 2 173,489, 0,186, -,-, 729579 Satellite W-chromosome 585 chrUn_NT_475807v1 2431 3632 GGXHOI 394 - 2431 3632 0 2 647,540, 0,661, -,-, 729580 Satellite W-chromosome 585 chrUn_NT_475808v1 3077 3449 (CTCTATGGGG)n 620 - 3077 3449 0 3 98,14,21, 0,218,351, -,-,-, 729586 Satellite Satellite 585 chrUn_NT_475809v1 1429 1878 (ACCCCATAGGG)n 646 - 1429 1878 0 2 120,291, 0,158, -,-, 729593 Satellite Satellite 585 chrUn_NT_475809v1 2192 2671 (ACCCCATAGGG)n 576 - 2192 2671 0 3 161,11,59, 0,288,420, -,-,-, 729597 Satellite Satellite 585 chrUn_NT_475809v1 2353 2752 (ACCCATAGGG)n 552 - 2353 2752 0 3 127,121,117, 0,138,282, -,-,-, 729598 Satellite Satellite 585 chrUn_NT_475813v1 1807 3624 GGXHOI 407 - 1807 3624 0 3 307,430,1027, 0,329,790, -,-,-, 729612 Satellite W-chromosome 585 chrUn_NT_475816v1 2901 3161 (GAAGT)n 92 + 2901 3161 0 2 175,38, 0,222, +,+, 729627 Simple_repeat Simple_repeat 585 chrUn_NT_475819v1 236 2414 (CCTTG)n 587 + 236 2414 0 7 203,24,222,509,41,293,195, 0,378,587,866,1556,1654,1983, +,+,+,+,+,+,+, 729640 Simple_repeat Simple_repeat 585 chrUn_NT_475819v1 2428 3612 (CCTTG)n 553 + 2428 3612 0 3 294,482,179, 0,506,1005, +,+,+, 729645 Simple_repeat Simple_repeat 585 chrUn_NT_475822v1 512 889 (CGAGG)n 546 + 512 889 0 2 163,10, 0,367, +,+, 729668 Simple_repeat Simple_repeat 585 chrUn_NT_475822v1 1946 2370 (CGAGG)n 546 + 1946 2370 0 2 188,180, 0,244, +,+, 729677 Simple_repeat Simple_repeat 585 chrUn_NT_475822v1 2627 3049 (CGAGG)n 473 + 2627 3049 0 2 190,232, 0,190, +,+, 729681 Simple_repeat Simple_repeat 585 chrUn_NT_475823v1 1171 2066 (CGAGG)n 581 + 1171 2066 0 2 176,684, 0,211, +,+, 729691 Simple_repeat Simple_repeat 585 chrUn_NT_475824v1 1107 2371 GGXHOI 377 + 1107 2371 0 2 542,706, 0,558, +,+, 729699 Satellite W-chromosome 585 chrUn_NT_475831v1 1875 2380 (CGAGG)n 466 + 1875 2380 0 2 84,237, 0,268, +,+, 729741 Simple_repeat Simple_repeat 585 chrUn_NT_475831v1 2501 2888 (CGAGG)n 502 + 2501 2888 0 2 183,185, 0,202, +,+, 729744 Simple_repeat Simple_repeat 585 chrUn_NT_475831v1 2983 3345 (CGAGG)n 492 + 2983 3345 0 2 110,73, 0,289, +,+, 729746 Simple_repeat Simple_repeat 585 chrUn_NT_475833v1 411 2041 (CAAGG)n 644 + 411 2041 0 5 165,499,218,179,522, 0,176,675,905,1108, +,+,+,+,+, 729752 Simple_repeat Simple_repeat 585 chrUn_NT_475833v1 2054 3608 (CAAGG)n 654 + 2054 3608 0 7 194,200,207,237,179,221,213, 0,236,436,656,909,1088,1341, +,+,+,+,+,+,+, 729754 Simple_repeat Simple_repeat 585 chrUn_NT_475835v1 291 654 (ACCCATAGGG)n 568 + 291 654 0 2 85,137, 0,226, +,+, 729759 Satellite Satellite 585 chrUn_NT_475835v1 1058 1336 (ACCCATAGAG)n 766 + 1058 1336 0 2 122,39, 0,239, +,+, 729764 Satellite Satellite 585 chrUn_NT_475835v1 1544 2214 (ACCCATAGAG)n 718 - 1544 2214 0 2 192,55, 0,615, -,-, 729768 Satellite Satellite 585 chrUn_NT_475835v1 1931 2369 (ACCCCATAGGG)n 582 - 1931 2369 0 4 68,40,46,19, 0,188,228,419, -,-,-,-, 729770 Satellite Satellite 585 chrUn_NT_475836v1 291 1136 (TTAGGG)n 626 + 291 1136 0 2 252,411, 0,434, +,+, 729777 Simple_repeat Simple_repeat 585 chrUn_NT_475836v1 2374 3605 (TTAGGG)n 641 + 2374 3605 0 4 418,224,7,215, 0,430,837,1016, +,+,+,+, 729786 Simple_repeat Simple_repeat 585 chrUn_NT_475837v1 1641 3602 GGXHOI 381 - 1641 3602 0 3 238,1244,436, 0,257,1525, -,-,-, 729791 Satellite W-chromosome 585 chrUn_NT_475840v1 1132 2341 (CCTTG)n 582 + 1132 2341 0 6 186,180,225,150,189,178, 0,236,433,658,821,1031, +,+,+,+,+,+, 729803 Simple_repeat Simple_repeat 585 chrUn_NT_475840v1 2428 3011 (CCTTG)n 531 + 2428 3011 0 3 179,193,172, 0,200,411, +,+,+, 729805 Simple_repeat Simple_repeat 585 chrUn_NT_475840v1 3214 3607 (CCTTG)n 649 + 3214 3607 0 2 186,180, 0,213, +,+, 729808 Simple_repeat Simple_repeat 585 chrUn_NT_475841v1 600 3604 Z-REP 916 + 600 3604 0 2 956,2037, 0,967, +,+, 729810 Satellite macro 585 chrUn_NT_475846v1 2253 2613 (CTCTATGGGG)n 742 - 2253 2613 0 2 171,40, 0,320, -,-, 729823 Satellite Satellite 585 chrUn_NT_475847v1 1269 1583 (ACTTG)n 408 + 1269 1583 0 2 100,35, 0,279, +,+, 729830 Simple_repeat Simple_repeat 585 chrUn_NT_475847v1 2200 2768 (CCTTG)n 594 + 2200 2768 0 2 364,181, 0,387, +,+, 729835 Simple_repeat Simple_repeat 585 chrUn_NT_475849v1 1988 2591 (GGATG)n 542 + 1988 2591 0 2 194,381, 0,222, +,+, 729849 Simple_repeat Simple_repeat 585 chrUn_NT_475850v1 1847 3588 GGXHOI 472 + 1847 3588 0 2 1292,399, 0,1342, +,+, 729858 Satellite W-chromosome 585 chrUn_NT_475860v1 216 1003 GGXHOI 401 - 216 1003 0 2 275,491, 0,296, -,-, 729875 Satellite W-chromosome 585 chrUn_NT_475860v1 1037 3005 GGXHOI 409 - 1037 3005 0 4 692,422,307,491, 0,711,1149,1477, -,-,-,-, 729877 Satellite W-chromosome 585 chrUn_NT_475861v1 152 2963 Sat-CR1_GG 162 + 152 2963 0 3 1617,11,454, 0,1641,2357, +,+,+, 729881 Satellite Satellite 585 chrUn_NT_475863v1 1692 3375 GGXHOI 501 - 1692 3375 0 2 276,1378, 0,305, -,-, 729890 Satellite W-chromosome 585 chrUn_NT_475864v1 610 2935 GGXHOI 398 + 610 2935 0 3 934,899,421, 0,956,1904, +,+,+, 729893 Satellite W-chromosome 585 chrUn_NT_475864v1 3077 3585 GGXHOI 344 + 3077 3585 0 2 222,259, 0,249, +,+, 729894 Satellite W-chromosome 585 chrUn_NT_475869v1 2957 3522 GGXHOI 317 - 2957 3522 0 3 268,101,118, 0,284,447, -,-,-, 729915 Satellite W-chromosome 585 chrUn_NT_475873v1 2072 2563 (CGAGG)n 596 + 2072 2563 0 2 186,305, 0,186, +,+, 729926 Simple_repeat Simple_repeat 585 chrUn_NT_475873v1 2663 3549 (CGAGG)n 564 + 2663 3549 0 3 298,332,204, 0,298,682, +,+,+, 729929 Simple_repeat Simple_repeat 585 chrUn_NT_475874v1 460 3569 GGXHOI 391 - 460 3569 0 2 1852,1240, 0,1869, -,-, 729931 Satellite W-chromosome 585 chrUn_NT_475877v1 2022 3183 GGXHOI 342 - 2022 3183 0 2 633,512, 0,649, -,-, 729940 Satellite W-chromosome 585 chrUn_NT_475879v1 1185 1278 (C)n 661 + 1185 1278 0 2 33,25, 0,68, +,+, 729946 Simple_repeat Simple_repeat 585 chrUn_NT_475880v1 1042 2833 GGXHOI 450 - 1042 2833 0 2 1131,604, 0,1187, -,-, 729951 Satellite W-chromosome 585 chrUn_NT_475883v1 307 1297 GGXHOI 378 - 307 1297 0 2 644,334, 0,656, -,-, 729956 Satellite W-chromosome 585 chrUn_NT_475883v1 1811 3553 GGXHOI 372 - 1811 3553 0 4 352,608,539,193, 0,363,985,1549, -,-,-,-, 729958 Satellite W-chromosome 585 chrUn_NT_475884v1 3241 3558 GGXHOI 555 - 3241 3558 0 2 151,140, 0,177, -,-, 729961 Satellite W-chromosome 585 chrUn_NT_475887v1 976 1523 GGXHOI 442 - 976 1523 0 2 136,369, 0,178, -,-, 729969 Satellite W-chromosome 585 chrUn_NT_475887v1 2170 3550 GGXHOI 398 - 2170 3550 0 3 130,806,346, 0,176,1034, -,-,-, 729972 Satellite W-chromosome 585 chrUn_NT_475905v1 2014 3534 GGXHOI 329 + 2014 3534 0 2 918,586, 0,934, +,+, 730020 Satellite W-chromosome 585 chrUn_NT_475906v1 1975 3545 GGXHOI 363 - 1975 3545 0 3 160,935,422, 0,198,1148, -,-,-, 730022 Satellite W-chromosome 585 chrUn_NT_475910v1 355 2243 GGXHOI 424 - 355 2243 0 3 1213,350,293, 0,1228,1595, -,-,-, 730035 Satellite W-chromosome 585 chrUn_NT_475911v1 163 406 (CTCTATGGGG)n 642 + 163 406 0 2 69,31, 0,212, +,+, 730038 Satellite Satellite 585 chrUn_NT_475911v1 1839 2198 (CTCTATGGGG)n 566 + 1839 2198 0 2 198,40, 0,319, +,+, 730048 Satellite Satellite 585 chrUn_NT_475911v1 2537 2810 (CTCTATGGGG)n 634 - 2537 2810 0 2 139,134, 0,139, -,-, 730052 Satellite Satellite 585 chrUn_NT_475912v1 1342 2093 GGXHOI 350 - 1342 2093 0 3 172,347,154, 0,217,597, -,-,-, 730058 Satellite W-chromosome 585 chrUn_NT_475912v1 2253 3544 GGXHOI 424 - 2253 3544 0 5 150,280,142,370,219, 0,176,500,656,1072, -,-,-,-,-, 730059 Satellite W-chromosome 585 chrUn_NT_475913v1 1263 2395 GGXHOI 392 + 1263 2395 0 2 723,394, 0,738, +,+, 730061 Satellite W-chromosome 585 chrUn_NT_475913v1 2510 3409 GGXHOI 355 + 2510 3409 0 2 580,278, 0,621, +,+, 730062 Satellite W-chromosome 585 chrUn_NT_475914v1 1271 3542 GGXHOI 388 + 1271 3542 0 2 1105,1151, 0,1120, +,+, 730065 Satellite W-chromosome 585 chrUn_NT_475915v1 3273 3541 (CACCC)n 635 + 3273 3541 0 2 187,62, 0,206, +,+, 730070 Simple_repeat Simple_repeat 585 chrUn_NT_475917v1 1706 3529 GGXHOI 419 + 1706 3529 0 4 340,526,137,708, 0,381,956,1115, +,+,+,+, 730075 Satellite W-chromosome 585 chrUn_NT_475918v1 439 858 (CATCC)n 655 + 439 858 0 2 178,191, 0,228, +,+, 730077 Simple_repeat Simple_repeat 585 chrUn_NT_475921v1 1612 3537 GGXHOI 401 - 1612 3537 0 3 667,596,621, 0,681,1304, -,-,-, 730091 Satellite W-chromosome 585 chrUn_NT_475925v1 1262 3308 GGXHOI 351 + 1262 3308 0 3 387,1085,458, 0,450,1588, +,+,+, 730110 Satellite W-chromosome 585 chrUn_NT_475927v1 1806 3533 GGXHOI 399 - 1806 3533 0 2 1414,298, 0,1429, -,-, 730116 Satellite W-chromosome 585 chrUn_NT_475934v1 1955 3416 GGXHOI 403 - 1955 3416 0 2 735,710, 0,751, -,-, 730134 Satellite W-chromosome 585 chrUn_NT_475937v1 1438 3469 GGXHOI 397 - 1438 3469 0 5 513,336,613,245,217, 0,528,885,1514,1814, -,-,-,-,-, 730149 Satellite W-chromosome 585 chrUn_NT_475938v1 124 1853 (ACCCATAGGG)n 301 - 124 1853 0 3 47,77,87, 0,288,1642, -,-,-, 730151 Satellite Satellite 585 chrUn_NT_475938v1 2151 2369 (ACCCATAGGG)n 292 - 2151 2369 0 2 43,81, 0,137, -,-, 730162 Satellite Satellite 585 chrUn_NT_475938v1 2771 3033 (ACCCATAGGG)n 353 - 2771 3033 0 2 55,141, 0,121, -,-, 730166 Satellite Satellite 585 chrUn_NT_475940v1 1889 3511 GGXHOI 371 + 1889 3511 0 3 218,242,1105, 0,258,517, +,+,+, 730177 Satellite W-chromosome 585 chrUn_NT_475941v1 1615 3522 (CGAGG)n 563 + 1615 3522 0 8 179,228,209,11,14,33,547,57, 0,229,486,878,1046,1243,1288,1850, +,+,+,+,+,+,+,+, 730185 Simple_repeat Simple_repeat 585 chrUn_NT_475942v1 1021 1664 GGXHOI 356 + 1021 1664 0 2 457,133, 0,510, +,+, 730190 Satellite W-chromosome 585 chrUn_NT_475942v1 1737 2905 GGXHOI 408 + 1737 2905 0 5 157,178,255,143,333, 0,189,415,681,835, +,+,+,+,+, 730191 Satellite W-chromosome 585 chrUn_NT_475947v1 289 1088 (CCCCATTGGG)n 355 - 289 1088 0 3 47,43,38, 0,654,761, -,-,-, 730202 Satellite Satellite 585 chrUn_NT_475947v1 2669 2824 (CCCCATTGGG)n 278 - 2669 2824 0 2 40,72, 0,83, -,-, 730215 Satellite Satellite 585 chrUn_NT_475951v1 2307 3444 GGXHOI 384 + 2307 3444 0 2 216,909, 0,228, +,+, 730232 Satellite W-chromosome 585 chrUn_NT_475953v1 645 1760 CR1-B2 691 - 645 1760 0 2 892,220, 0,895, -,-, 730239 LINE CR1 585 chrUn_NT_475954v1 2045 3145 GGXHOI 418 - 2045 3145 0 3 454,418,186, 0,477,914, -,-,-, 730244 Satellite W-chromosome 585 chrUn_NT_475958v1 1871 2340 GGXHOI 328 + 1871 2340 0 2 147,270, 0,199, +,+, 730258 Satellite W-chromosome 585 chrUn_NT_475959v1 2457 3445 GGXHOI 367 - 2457 3445 0 3 150,132,608, 0,206,380, -,-,-, 730265 Satellite W-chromosome 585 chrUn_NT_475960v1 362 2046 (CCTTG)n 624 + 362 2046 0 5 119,171,202,46,449, 0,307,781,1163,1235, +,+,+,+,+, 730268 Simple_repeat Simple_repeat 585 chrUn_NT_475960v1 1995 3482 (CCTTG)n 623 + 1995 3482 0 4 425,102,24,383, 0,425,1068,1104, +,+,+,+, 730274 Simple_repeat Simple_repeat 585 chrUn_NT_475961v1 1558 3025 (TTAGGG)n 618 + 1558 3025 0 3 92,466,674, 0,272,793, +,+,+, 730286 Simple_repeat Simple_repeat 585 chrUn_NT_475961v1 3080 3510 (TTAGGG)n 648 + 3080 3510 0 2 192,194, 0,236, +,+, 730289 Simple_repeat Simple_repeat 585 chrUn_NT_475962v1 1167 2266 (GCCCCACAGCT)n 544 - 1167 2266 0 4 264,34,33,83, 0,711,864,1016, -,-,-,-, 730293 Satellite Satellite 585 chrUn_NT_475962v1 2196 2704 (CTCTATGGGG)n 650 + 2196 2704 0 3 88,61,119, 0,304,389, +,+,+, 730298 Satellite Satellite 585 chrUn_NT_475962v1 2284 2766 (GCCCCACAGCT)n 571 - 2284 2766 0 3 216,85,62, 0,216,420, -,-,-, 730299 Satellite Satellite 585 chrUn_NT_475966v1 2752 3452 GGXHOI 360 + 2752 3452 0 2 526,140, 0,560, +,+, 730314 Satellite W-chromosome 585 chrUn_NT_475969v1 994 3381 (CGAGG)n 517 + 994 3381 0 6 332,188,507,352,90,455, 0,390,625,1146,1676,1932, +,+,+,+,+,+, 730321 Simple_repeat Simple_repeat 585 chrUn_NT_475971v1 1764 3421 GGXHOI 350 + 1764 3421 0 3 927,146,550, 0,944,1107, +,+,+, 730329 Satellite W-chromosome 585 chrUn_NT_475972v1 1432 3391 GGXHOI 364 + 1432 3391 0 3 480,1060,383, 0,497,1576, +,+,+, 730331 Satellite W-chromosome 585 chrUn_NT_475976v1 447 3187 GGERV28_I-int 53 - 447 3187 0 2 1309,1112, 0,1628, -,-, 730366 LTR ERVK 585 chrUn_NT_475977v1 2814 3362 GGXHOI 346 - 2814 3362 0 2 264,267, 0,281, -,-, 730371 Satellite W-chromosome 585 chrUn_NT_475978v1 1141 3491 GGXHOI 361 - 1141 3491 0 2 714,1613, 0,737, -,-, 730373 Satellite W-chromosome 585 chrUn_NT_475979v1 2626 3496 Z-REP 786 - 2626 3496 0 2 49,810, 0,60, -,-, 730375 Satellite macro 585 chrUn_NT_475981v1 336 578 (CCTTG)n 487 + 336 578 0 2 178,24, 0,218, +,+, 730382 Simple_repeat Simple_repeat 585 chrUn_NT_475981v1 631 1272 (CCTTG)n 513 + 631 1272 0 3 292,110,54, 0,309,587, +,+,+, 730384 Simple_repeat Simple_repeat 585 chrUn_NT_475981v1 1642 1994 (CCTTG)n 418 + 1642 1994 0 2 175,162, 0,190, +,+, 730386 Simple_repeat Simple_repeat 585 chrUn_NT_475981v1 2068 2362 (GCCTG)n 304 + 2068 2362 0 2 55,179, 0,115, +,+, 730389 Simple_repeat Simple_repeat 585 chrUn_NT_475981v1 2412 3328 (CAAGG)n 532 + 2412 3328 0 4 162,178,121,59, 0,343,521,857, +,+,+,+, 730390 Simple_repeat Simple_repeat 585 chrUn_NT_475982v1 2350 2641 GGLTR3E1 740 + 2350 2641 0 2 177,114, 0,177, +,+, 730397 LTR ERVL 585 chrUn_NT_475984v1 487 772 (ACCCATTGGG)n 471 - 487 772 0 2 117,127, 0,158, -,-, 730402 Satellite Satellite 585 chrUn_NT_475990v1 251 744 (CAAGG)n 600 + 251 744 0 2 300,193, 0,300, +,+, 730429 Simple_repeat Simple_repeat 585 chrUn_NT_475990v1 815 1412 (CAAGG)n 629 + 815 1412 0 2 191,235, 0,362, +,+, 730431 Simple_repeat Simple_repeat 585 chrUn_NT_475990v1 1423 3486 (CAAGG)n 556 + 1423 3486 0 5 145,14,165,146,410, 0,430,608,1109,1653, +,+,+,+,+, 730433 Simple_repeat Simple_repeat 585 chrUn_NT_475992v1 118 528 (CCTTG)n 544 + 118 528 0 2 220,37, 0,373, +,+, 730442 Simple_repeat Simple_repeat 585 chrUn_NT_475992v1 1073 2546 (CCTTG)n 532 + 1073 2546 0 5 190,345,205,513,196, 0,190,535,752,1277, +,+,+,+,+, 730445 Simple_repeat Simple_repeat 585 chrUn_NT_475992v1 2882 3489 (CCTTG)n 625 + 2882 3489 0 3 176,180,201, 0,222,406, +,+,+, 730450 Simple_repeat Simple_repeat 585 chrUn_NT_475993v1 77 530 (CAAGG)n 456 + 77 530 0 2 183,244, 0,209, +,+, 730452 Simple_repeat Simple_repeat 585 chrUn_NT_475993v1 1993 2539 (CCTTG)n 477 + 1993 2539 0 3 176,231,110, 0,176,436, +,+,+, 730460 Simple_repeat Simple_repeat 585 chrUn_NT_475993v1 2898 3307 (CAAGG)n 499 + 2898 3307 0 2 206,181, 0,228, +,+, 730464 Simple_repeat Simple_repeat 585 chrUn_NT_475996v1 576 1929 (CGAGG)n 607 + 576 1929 0 4 185,230,243,496, 0,185,432,857, +,+,+,+, 730481 Simple_repeat Simple_repeat 585 chrUn_NT_475996v1 2163 3363 (CGAGG)n 571 + 2163 3363 0 3 568,140,303, 0,744,897, +,+,+, 730486 Simple_repeat Simple_repeat 585 chrUn_NT_476000v1 638 1004 (CAAGG)n 487 + 638 1004 0 2 171,179, 0,187, +,+, 730498 Simple_repeat Simple_repeat 585 chrUn_NT_476000v1 1197 1706 (CCTTG)n 480 + 1197 1706 0 2 367,105, 0,404, +,+, 730501 Simple_repeat Simple_repeat 585 chrUn_NT_476000v1 1748 2195 (CCTTG)n 494 + 1748 2195 0 2 195,76, 0,371, +,+, 730503 Simple_repeat Simple_repeat 585 chrUn_NT_476000v1 2769 3475 (CAAGG)n 533 + 2769 3475 0 3 211,364,80, 0,239,626, +,+,+, 730508 Simple_repeat Simple_repeat 585 chrUn_NT_476001v1 1918 2491 Sat-CR1_GG 148 + 1918 2491 0 2 163,171, 0,402, +,+, 730515 Satellite Satellite 585 chrUn_NT_476002v1 1150 3475 GGLTR7-int 582 + 1150 3475 0 2 338,661, 0,1664, +,+, 730522 LTR ERV1 585 chrUn_NT_476004v1 484 852 (CTCTATGGGG)n 520 - 484 852 0 2 147,206, 0,162, -,-, 730531 Satellite Satellite 585 chrUn_NT_476004v1 1431 2023 (ACCCCATAGGG)n 445 - 1431 2023 0 3 147,154,291, 0,147,301, -,-,-, 730536 Satellite Satellite 585 chrUn_NT_476004v1 1978 2311 (CTCTATGGGG)n 548 - 1978 2311 0 2 195,19, 0,314, -,-, 730537 Satellite Satellite 585 chrUn_NT_476004v1 3157 3372 (CTCTATGGGG)n 536 + 3157 3372 0 2 61,38, 0,177, +,+, 730547 Satellite Satellite 585 chrUn_NT_476005v1 2899 3116 GGXHOI 355 - 2899 3116 0 2 89,111, 0,106, -,-, 730551 Satellite W-chromosome 585 chrUn_NT_476007v1 228 986 GGXHOI 406 - 228 986 0 4 192,212,194,98, 0,209,452,660, -,-,-,-, 730561 Satellite W-chromosome 585 chrUn_NT_476007v1 1055 3271 GGXHOI 376 - 1055 3271 0 5 138,1126,151,479,228, 0,152,1331,1497,1988, -,-,-,-,-, 730562 Satellite W-chromosome 585 chrUn_NT_476008v1 1577 1863 (CTCTATGGGG)n 641 + 1577 1863 0 2 115,119, 0,167, +,+, 730568 Satellite Satellite 585 chrUn_NT_476015v1 701 1384 GGXHOI 398 + 701 1384 0 2 274,389, 0,294, +,+, 730587 Satellite W-chromosome 585 chrUn_NT_476015v1 1470 3430 GGXHOI 297 + 1470 3430 0 4 466,482,165,715, 0,496,1029,1245, +,+,+,+, 730588 Satellite W-chromosome 585 chrUn_NT_476016v1 1200 1947 (CAAGG)n 620 + 1200 1947 0 2 180,567, 0,180, +,+, 730598 Simple_repeat Simple_repeat 585 chrUn_NT_476016v1 1632 2173 (CAGGC)n 551 + 1632 2173 0 3 114,62,190, 0,289,351, +,+,+, 730599 Simple_repeat Simple_repeat 585 chrUn_NT_476016v1 2388 3267 CR1-F0 890 + 2388 3267 0 2 762,117, 0,762, +,+, 730602 LINE CR1 585 chrUn_NT_476018v1 2094 3433 (CCCCATTGGG)n 609 + 2094 3433 0 7 124,247,124,311,115,16,127, 0,171,470,599,929,1170,1212, +,+,+,+,+,+,+, 730608 Satellite Satellite 585 chrUn_NT_476027v1 556 706 CR1-B 611 + 556 706 0 2 47,59, 0,91, +,+, 730633 LINE CR1 585 chrUn_NT_476029v1 450 863 (ACCCCATAGGG)n 383 + 450 863 0 3 121,123,115, 0,164,298, +,+,+, 730638 Satellite Satellite 585 chrUn_NT_476029v1 1840 2925 (ACCCCATAGGG)n 337 + 1840 2925 0 7 128,117,133,127,128,121,139, 0,145,312,456,619,795,946, +,+,+,+,+,+,+, 730642 Satellite Satellite 585 chrUn_NT_476032v1 2045 2407 CR1-F 607 - 2045 2407 0 2 100,102, 0,260, -,-, 730651 LINE CR1 585 chrUn_NT_476032v1 2450 2912 CR1-F 543 - 2450 2912 0 2 215,202, 0,260, -,-, 730652 LINE CR1 585 chrUn_NT_476033v1 2088 3133 GGXHOI 507 + 2088 3133 0 3 42,485,185, 0,342,860, +,+,+, 730659 Satellite W-chromosome 585 chrUn_NT_476037v1 1844 3448 GGXHOI 357 + 1844 3448 0 4 610,391,416,131, 0,625,1043,1473, +,+,+,+, 730687 Satellite W-chromosome 585 chrUn_NT_476038v1 874 1372 GGXHOI 265 - 874 1372 0 2 288,164, 0,334, -,-, 730689 Satellite W-chromosome 585 chrUn_NT_476038v1 1483 3424 GGXHOI 355 - 1483 3424 0 5 939,220,360,133,172, 0,973,1207,1582,1769, -,-,-,-,-, 730690 Satellite W-chromosome 585 chrUn_NT_476042v1 1483 1759 CR1-X2 380 + 1483 1759 0 2 63,213, 0,63, +,+, 730708 LINE CR1 585 chrUn_NT_476043v1 249 1427 (CAGGC)n 534 + 249 1427 0 4 180,96,148,567, 0,180,462,611, +,+,+,+, 730711 Simple_repeat Simple_repeat 585 chrUn_NT_476043v1 1014 1541 (CAAGG)n 484 + 1014 1541 0 2 267,78, 0,449, +,+, 730713 Simple_repeat Simple_repeat 585 chrUn_NT_476043v1 2022 2657 (CAAGG)n 655 + 2022 2657 0 3 229,203,192, 0,229,443, +,+,+, 730719 Simple_repeat Simple_repeat 585 chrUn_NT_476043v1 2751 3434 (CAAGG)n 676 + 2751 3434 0 3 179,242,25, 0,237,658, +,+,+, 730721 Simple_repeat Simple_repeat 585 chrUn_NT_476046v1 679 2767 GGXHOI 367 - 679 2767 0 4 1081,561,223,124, 0,1095,1711,1964, -,-,-,-, 730732 Satellite W-chromosome 585 chrUn_NT_476046v1 2850 3413 GGXHOI 404 - 2850 3413 0 2 356,179, 0,384, -,-, 730733 Satellite W-chromosome 585 chrUn_NT_476052v1 1773 2507 (CGAGG)n 481 + 1773 2507 0 3 277,247,15, 0,296,719, +,+,+, 730762 Simple_repeat Simple_repeat 585 chrUn_NT_476052v1 3029 3436 (CGAGG)n 451 + 3029 3436 0 2 179,175, 0,232, +,+, 730767 Simple_repeat Simple_repeat 585 chrUn_NT_476057v1 1008 3340 GGLTR7-int 591 - 1008 3340 0 2 753,257, 0,2075, -,-, 730790 LTR ERV1 585 chrUn_NT_476062v1 1682 2374 GGXHOI 377 - 1682 2374 0 3 139,162,296, 0,196,396, -,-,-, 730799 Satellite W-chromosome 585 chrUn_NT_476069v1 998 3412 GGXHOI 377 - 998 3412 0 3 998,1033,259, 0,1060,2155, -,-,-, 730844 Satellite W-chromosome 585 chrUn_NT_476070v1 451 946 (ACCCCATAGGG)n 574 + 451 946 0 2 178,188, 0,307, +,+, 730846 Satellite Satellite 585 chrUn_NT_476070v1 896 1646 (ACCCCATAGGG)n 419 + 896 1646 0 3 310,167,161, 0,310,589, +,+,+, 730849 Satellite Satellite 585 chrUn_NT_476070v1 1849 2092 (CTCTATGGGG)n 434 - 1849 2092 0 2 87,39, 0,204, -,-, 730854 Satellite Satellite 585 chrUn_NT_476070v1 2421 2794 (CTCTATGGGG)n 522 - 2421 2794 0 2 58,196, 0,177, -,-, 730858 Satellite Satellite 585 chrUn_NT_476072v1 1583 2579 (CGAGG)n 545 + 1583 2579 0 4 352,177,181,200, 0,414,615,796, +,+,+,+, 730871 Simple_repeat Simple_repeat 585 chrUn_NT_476076v1 321 1632 (CCCTAA)n 627 + 321 1632 0 6 180,170,160,182,171,75, 0,223,434,618,837,1236, +,+,+,+,+,+, 730888 Simple_repeat Simple_repeat 585 chrUn_NT_476076v1 1920 3014 GGXHOI 354 + 1920 3014 0 4 142,436,149,281, 0,156,615,813, +,+,+,+, 730891 Satellite W-chromosome 585 chrUn_NT_476077v1 2806 3044 (GTTCTTTCC)n 907 + 2806 3044 0 3 43,44,44, 0,102,194, +,+,+, 730902 Simple_repeat Simple_repeat 585 chrUn_NT_476078v1 493 1671 (CAAGG)n 464 + 493 1671 0 4 150,545,175,262, 0,167,724,916, +,+,+,+, 730906 Simple_repeat Simple_repeat 585 chrUn_NT_476078v1 1690 2470 (CCTTG)n 497 + 1690 2470 0 3 251,255,201, 0,279,579, +,+,+, 730907 Simple_repeat Simple_repeat 585 chrUn_NT_476079v1 1669 2297 CR1-H 324 + 1669 2297 0 2 213,378, 0,250, +,+, 730912 LINE CR1 585 chrUn_NT_476082v1 1509 2549 GGXHOI 359 + 1509 2549 0 2 472,505, 0,535, +,+, 730918 Satellite W-chromosome 585 chrUn_NT_476083v1 318 777 (ACCCCATAGGG)n 414 + 318 777 0 2 190,269, 0,190, +,+, 730923 Satellite Satellite 585 chrUn_NT_476083v1 1547 1836 (ACCCCATAGGG)n 449 + 1547 1836 0 2 118,123, 0,166, +,+, 730929 Satellite Satellite 585 chrUn_NT_476083v1 1907 2281 (ACCCCATAGGG)n 458 + 1907 2281 0 2 211,140, 0,234, +,+, 730931 Satellite Satellite 585 chrUn_NT_476084v1 2989 3257 (ACCCATAGGG)n 472 + 2989 3257 0 2 131,124, 0,144, +,+, 730942 Satellite Satellite 585 chrUn_NT_476085v1 2546 3313 (CGAGG)n 545 + 2546 3313 0 2 173,559, 0,208, +,+, 730947 Simple_repeat Simple_repeat 585 chrUn_NT_476087v1 1821 3412 GGXHOI 344 - 1821 3412 0 3 950,425,146, 0,994,1445, -,-,-, 730962 Satellite W-chromosome 585 chrUn_NT_476089v1 784 2525 GGXHOI 325 - 784 2525 0 3 171,988,549, 0,186,1192, -,-,-, 730965 Satellite W-chromosome 585 chrUn_NT_476089v1 2662 3410 GGXHOI 423 - 2662 3410 0 3 258,145,298, 0,270,450, -,-,-, 730966 Satellite W-chromosome 585 chrUn_NT_476090v1 371 754 (ACCCCATAGGG)n 330 - 371 754 0 2 160,161, 0,222, -,-, 730968 Satellite Satellite 585 chrUn_NT_476090v1 827 1754 (ACCCCATAGGG)n 349 - 827 1754 0 4 162,157,340,166, 0,188,362,761, -,-,-,-, 730969 Satellite Satellite 585 chrUn_NT_476090v1 2660 2978 (ACCCCATAGGG)n 302 - 2660 2978 0 2 158,136, 0,182, -,-, 730972 Satellite Satellite 585 chrUn_NT_476092v1 1870 2265 GGXHOI 417 + 1870 2265 0 3 149,81,139, 0,161,256, +,+,+, 730977 Satellite W-chromosome 585 chrUn_NT_476092v1 2671 3255 GGXHOI 359 + 2671 3255 0 2 76,492, 0,92, +,+, 730978 Satellite W-chromosome 585 chrUn_NT_476099v1 997 3408 GGLTR3F1 900 - 997 3408 0 2 492,1919, 0,492, -,-, 730993 LTR ERVL 585 chrUn_NT_476100v1 275 799 (CCCTAA)n 649 + 275 799 0 2 184,322, 0,202, +,+, 730996 Simple_repeat Simple_repeat 585 chrUn_NT_476100v1 927 3253 (CCCTAA)n 562 + 927 3253 0 7 334,733,180,114,101,183,170, 0,334,1113,1354,1802,1933,2156, +,+,+,+,+,+,+, 730997 Simple_repeat Simple_repeat 585 chrUn_NT_476101v1 99 535 (CGAGG)n 505 + 99 535 0 2 170,250, 0,186, +,+, 731002 Simple_repeat Simple_repeat 585 chrUn_NT_476101v1 1117 2338 (CGAGG)n 511 + 1117 2338 0 6 198,213,157,25,184,175, 0,221,470,801,851,1046, +,+,+,+,+,+, 731008 Simple_repeat Simple_repeat 585 chrUn_NT_476101v1 2639 3394 (CGAGG)n 494 + 2639 3394 0 2 179,540, 0,215, +,+, 731013 Simple_repeat Simple_repeat 585 chrUn_NT_476112v1 1584 2738 (CCCTAA)n 607 + 1584 2738 0 4 370,181,181,368, 0,382,584,786, +,+,+,+, 731065 Simple_repeat Simple_repeat 585 chrUn_NT_476112v1 3125 3390 (CCCTAA)n 618 + 3125 3390 0 2 176,78, 0,187, +,+, 731070 Simple_repeat Simple_repeat 585 chrUn_NT_476113v1 2893 3396 GGXHOI 415 - 2893 3396 0 2 270,183, 0,320, -,-, 731074 Satellite W-chromosome 585 chrUn_NT_476115v1 497 1111 CR1-H 359 - 497 1111 0 2 374,204, 0,410, -,-, 731081 LINE CR1 585 chrUn_NT_476117v1 599 3384 GGXHOI 559 + 599 3384 0 4 24,469,55,402, 0,931,2307,2383, +,+,+,+, 731093 Satellite W-chromosome 585 chrUn_NT_476118v1 1895 2812 (CCTCG)n 465 + 1895 2812 0 3 504,184,172, 0,538,745, +,+,+, 731097 Simple_repeat Simple_repeat 585 chrUn_NT_476120v1 1302 2601 (CGAGG)n 562 + 1302 2601 0 4 540,132,226,175, 0,540,855,1124, +,+,+,+, 731115 Simple_repeat Simple_repeat 585 chrUn_NT_476120v1 2634 2993 (CGAGG)n 561 + 2634 2993 0 2 178,170, 0,189, +,+, 731118 Simple_repeat Simple_repeat 585 chrUn_NT_476123v1 230 3152 GGXHOI 582 - 230 3152 0 6 43,339,305,99,71,1109, 0,252,641,987,1363,1813, -,-,-,-,-,-, 731126 Satellite W-chromosome 585 chrUn_NT_476127v1 2819 3376 CR1-H 688 - 2819 3376 0 2 117,440, 0,117, -,-, 731156 LINE CR1 585 chrUn_NT_476131v1 1134 2626 GGXHOI 359 - 1134 2626 0 2 824,651, 0,841, -,-, 731186 Satellite W-chromosome 585 chrUn_NT_476131v1 2740 3374 GGXHOI 416 - 2740 3374 0 2 480,138, 0,496, -,-, 731187 Satellite W-chromosome 585 chrUn_NT_476133v1 477 894 GGXHOI 372 + 477 894 0 2 138,264, 0,153, +,+, 731192 Satellite W-chromosome 585 chrUn_NT_476133v1 2239 3354 GGXHOI 405 + 2239 3354 0 3 573,245,232, 0,611,883, +,+,+, 731196 Satellite W-chromosome 585 chrUn_NT_476137v1 2597 2875 (ACCCATAGGG)n 384 - 2597 2875 0 2 102,137, 0,141, -,-, 731210 Satellite Satellite 585 chrUn_NT_476140v1 667 1352 GGXHOI 395 + 667 1352 0 3 175,184,258, 0,192,427, +,+,+, 731218 Satellite W-chromosome 585 chrUn_NT_476140v1 1459 3371 GGXHOI 482 + 1459 3371 0 6 434,60,289,376,418,181, 0,477,566,870,1262,1731, +,+,+,+,+,+, 731219 Satellite W-chromosome 585 chrUn_NT_476142v1 215 2569 GGXHOI 544 - 215 2569 0 3 330,64,763, 0,853,1591, -,-,-, 731222 Satellite W-chromosome 585 chrUn_NT_476142v1 2612 3363 GGXHOI 569 - 2612 3363 0 2 498,191, 0,560, -,-, 731226 Satellite W-chromosome 585 chrUn_NT_476144v1 2391 3368 GGXHOI 375 - 2391 3368 0 2 740,225, 0,752, -,-, 731229 Satellite W-chromosome 585 chrUn_NT_476145v1 1839 3361 GGXHOI 560 - 1839 3361 0 3 525,23,24, 0,1076,1498, -,-,-, 731233 Satellite W-chromosome 585 chrUn_NT_476146v1 1749 2372 CR1-H 637 - 1749 2372 0 2 144,474, 0,149, -,-, 731237 LINE CR1 585 chrUn_NT_476149v1 520 907 GGXHOI 348 - 520 907 0 2 253,116, 0,271, -,-, 731247 Satellite W-chromosome 585 chrUn_NT_476149v1 1603 2861 GGXHOI 391 - 1603 2861 0 4 580,117,174,341, 0,600,728,917, -,-,-,-, 731249 Satellite W-chromosome 585 chrUn_NT_476149v1 2949 3354 GGXHOI 425 - 2949 3354 0 2 66,320, 0,85, -,-, 731250 Satellite W-chromosome 585 chrUn_NT_476151v1 573 952 (CGAGG)n 545 + 573 952 0 2 180,174, 0,205, +,+, 731257 Simple_repeat Simple_repeat 585 chrUn_NT_476151v1 1120 2199 (CGAGG)n 514 + 1120 2199 0 2 553,484, 0,595, +,+, 731258 Simple_repeat Simple_repeat 585 chrUn_NT_476152v1 1535 1962 (CTC)n 308 + 1535 1962 0 2 318,6, 0,421, +,+, 731266 Simple_repeat Simple_repeat 585 chrUn_NT_476155v1 1029 2008 (CCTTG)n 633 + 1029 2008 0 2 492,455, 0,524, +,+, 731288 Simple_repeat Simple_repeat 585 chrUn_NT_476155v1 1743 2292 (GCCTG)n 510 + 1743 2292 0 2 287,60, 0,489, +,+, 731289 Simple_repeat Simple_repeat 585 chrUn_NT_476155v1 2259 2817 (CCTTG)n 612 + 2259 2817 0 2 179,365, 0,193, +,+, 731291 Simple_repeat Simple_repeat 585 chrUn_NT_476157v1 832 3360 GGXHOI 371 - 832 3360 0 3 1548,353,562, 0,1597,1966, -,-,-, 731299 Satellite W-chromosome 585 chrUn_NT_476160v1 1068 1795 (CGAGG)n 504 + 1068 1795 0 2 361,348, 0,379, +,+, 731313 Simple_repeat Simple_repeat 585 chrUn_NT_476160v1 2133 2894 (CGAGG)n 529 + 2133 2894 0 2 574,172, 0,589, +,+, 731316 Simple_repeat Simple_repeat 585 chrUn_NT_476165v1 1733 2261 GGXHOI 392 + 1733 2261 0 2 221,256, 0,272, +,+, 731333 Satellite W-chromosome 585 chrUn_NT_476166v1 1101 2179 (CAGAA)n 547 + 1101 2179 0 3 193,148,461, 0,193,617, +,+,+, 731340 Simple_repeat Simple_repeat 585 chrUn_NT_476166v1 1791 2247 (AATAG)n 572 + 1791 2247 0 2 181,95, 0,361, +,+, 731342 Simple_repeat Simple_repeat 585 chrUn_NT_476173v1 762 1075 (CTATGGGTCC)n 786 + 762 1075 0 2 204,57, 0,256, +,+, 731381 Simple_repeat Simple_repeat 585 chrUn_NT_476173v1 1355 1599 (CTATGGGTCC)n 812 + 1355 1599 0 3 56,57,57, 0,100,187, +,+,+, 731385 Simple_repeat Simple_repeat 585 chrUn_NT_476186v1 529 1382 GGXHOI 312 - 529 1382 0 2 568,265, 0,588, -,-, 731460 Satellite W-chromosome 585 chrUn_NT_476186v1 1633 2177 GGXHOI 314 - 1633 2177 0 2 257,270, 0,274, -,-, 731461 Satellite W-chromosome 585 chrUn_NT_476186v1 2324 3295 GGXHOI 287 - 2324 3295 0 2 699,248, 0,723, -,-, 731462 Satellite W-chromosome 585 chrUn_NT_476187v1 2022 3335 GGXHOI 354 - 2022 3335 0 4 154,302,604,156, 0,168,506,1157, -,-,-,-, 731465 Satellite W-chromosome 585 chrUn_NT_476188v1 206 2862 (GCCCCACAGCT)n 558 + 206 2862 0 6 424,329,498,121,298,682, 0,473,840,1361,1645,1974, +,+,+,+,+,+, 731467 Satellite Satellite 585 chrUn_NT_476188v1 2873 3338 (GCCCCACAGCT)n 532 + 2873 3338 0 2 188,147, 0,318, +,+, 731470 Satellite Satellite 585 chrUn_NT_476194v1 1356 1766 (GCCCCACAGCT)n 504 - 1356 1766 0 2 109,273, 0,137, -,-, 731480 Satellite Satellite 585 chrUn_NT_476194v1 2711 2950 (GCCCCACAGCT)n 370 - 2711 2950 0 3 27,32,66, 0,94,173, -,-,-, 731483 Satellite Satellite 585 chrUn_NT_476202v1 351 2192 GGXHOI 355 - 351 2192 0 3 951,466,390, 0,967,1451, -,-,-, 731511 Satellite W-chromosome 585 chrUn_NT_476202v1 2259 3309 GGXHOI 449 - 2259 3309 0 2 131,900, 0,150, -,-, 731512 Satellite W-chromosome 585 chrUn_NT_476210v1 1028 1767 (CTCTATGGGG)n 513 - 1028 1767 0 6 99,88,114,53,131,122, 0,123,236,374,452,617, -,-,-,-,-,-, 731539 Satellite Satellite 585 chrUn_NT_476210v1 1833 2094 (CTCTATGGGG)n 550 - 1833 2094 0 2 118,115, 0,146, -,-, 731540 Satellite Satellite 585 chrUn_NT_476210v1 2287 2628 (CTCTATGGGG)n 531 + 2287 2628 0 2 175,166, 0,175, +,+, 731542 Satellite Satellite 585 chrUn_NT_476210v1 2682 2956 (CTCTATGGGG)n 474 - 2682 2956 0 2 109,141, 0,133, -,-, 731543 Satellite Satellite 585 chrUn_NT_476213v1 1004 1552 GGXHOI 353 - 1004 1552 0 3 170,131,182, 0,195,366, -,-,-, 731550 Satellite W-chromosome 585 chrUn_NT_476213v1 1617 3310 GGXHOI 408 - 1617 3310 0 4 253,135,492,740, 0,269,425,953, -,-,-,-, 731551 Satellite W-chromosome 585 chrUn_NT_476221v1 1438 2190 GGXHOI 371 + 1438 2190 0 2 336,360, 0,392, +,+, 731567 Satellite W-chromosome 585 chrUn_NT_476222v1 2738 2870 (C)n 711 + 2738 2870 0 2 42,31, 0,101, +,+, 731572 Simple_repeat Simple_repeat 585 chrUn_NT_476223v1 1914 2707 GGXHOI 290 - 1914 2707 0 2 378,374, 0,419, -,-, 731576 Satellite W-chromosome 585 chrUn_NT_476224v1 1299 3261 GGXHOI 382 + 1299 3261 0 8 140,475,68,200,165,170,176,349, 0,158,649,732,983,1182,1395,1613, +,+,+,+,+,+,+,+, 731582 Satellite W-chromosome 585 chrUn_NT_476225v1 1117 1798 (TTAGGG)n 626 + 1117 1798 0 2 183,475, 0,206, +,+, 731586 Simple_repeat Simple_repeat 585 chrUn_NT_476225v1 1851 3311 (TTAGGG)n 656 + 1851 3311 0 4 451,289,92,176, 0,707,1009,1284, +,+,+,+, 731588 Simple_repeat Simple_repeat 585 chrUn_NT_476227v1 2177 2724 CR1-H 465 + 2177 2724 0 2 209,161, 0,386, +,+, 731595 LINE CR1 585 chrUn_NT_476228v1 132 2870 CR1-F 575 + 132 2870 0 9 203,204,177,155,202,181,155,195,189, 0,245,489,710,1156,1634,1859,2307,2549, +,+,+,+,+,+,+,+,+, 731599 LINE CR1 585 chrUn_NT_476231v1 142 1514 (TTAGGG)n 528 + 142 1514 0 4 356,190,381,370, 0,372,578,1002, +,+,+,+, 731611 Simple_repeat Simple_repeat 585 chrUn_NT_476231v1 1626 2985 (TTAGGG)n 673 + 1626 2985 0 4 736,184,181,183, 0,760,976,1176, +,+,+,+, 731613 Simple_repeat Simple_repeat 585 chrUn_NT_476235v1 460 561 (C)n 635 + 460 561 0 2 40,25, 0,76, +,+, 731624 Simple_repeat Simple_repeat 585 chrUn_NT_476236v1 708 1159 (CAGGC)n 567 + 708 1159 0 2 193,258, 0,193, +,+, 731632 Simple_repeat Simple_repeat 585 chrUn_NT_476236v1 1243 1835 (CAGGC)n 490 + 1243 1835 0 2 222,328, 0,264, +,+, 731635 Simple_repeat Simple_repeat 585 chrUn_NT_476236v1 1865 2256 (CAAGG)n 650 + 1865 2256 0 2 175,43, 0,348, +,+, 731637 Simple_repeat Simple_repeat 585 chrUn_NT_476237v1 329 756 (CCTCG)n 540 + 329 756 0 2 121,117, 0,310, +,+, 731644 Simple_repeat Simple_repeat 585 chrUn_NT_476237v1 824 1278 (CCTCG)n 515 + 824 1278 0 2 184,254, 0,200, +,+, 731646 Simple_repeat Simple_repeat 585 chrUn_NT_476237v1 2097 2763 (CCTCG)n 516 + 2097 2763 0 2 278,376, 0,290, +,+, 731652 Simple_repeat Simple_repeat 585 chrUn_NT_476237v1 2861 3231 (CCTCG)n 500 + 2861 3231 0 2 151,40, 0,330, +,+, 731654 Simple_repeat Simple_repeat 585 chrUn_NT_476242v1 1652 3167 GGXHOI 403 - 1652 3167 0 2 1195,260, 0,1255, -,-, 731667 Satellite W-chromosome 585 chrUn_NT_476243v1 2561 3287 GGXHOI 380 - 2561 3287 0 2 176,538, 0,188, -,-, 731671 Satellite W-chromosome 585 chrUn_NT_476245v1 1302 3196 GGXHOI 377 - 1302 3196 0 4 1027,192,274,315, 0,1090,1293,1579, -,-,-,-, 731681 Satellite W-chromosome 585 chrUn_NT_476247v1 1147 2354 (TTAGGG)n 670 + 1147 2354 0 5 93,203,261,134,73, 0,271,490,805,1134, +,+,+,+,+, 731690 Simple_repeat Simple_repeat 585 chrUn_NT_476247v1 2463 3290 (TTAGGG)n 660 + 2463 3290 0 2 139,508, 0,319, +,+, 731694 Simple_repeat Simple_repeat 585 chrUn_NT_476250v1 941 2421 GGXHOI 335 + 941 2421 0 4 317,204,205,670, 0,363,581,810, +,+,+,+, 731716 Satellite W-chromosome 585 chrUn_NT_476250v1 2500 3274 GGXHOI 389 + 2500 3274 0 4 138,181,94,298, 0,150,346,476, +,+,+,+, 731717 Satellite W-chromosome 585 chrUn_NT_476254v1 396 1297 (CGAGG)n 459 + 396 1297 0 3 185,190,458, 0,239,443, +,+,+, 731724 Simple_repeat Simple_repeat 585 chrUn_NT_476254v1 1791 2525 (CGAGG)n 468 + 1791 2525 0 2 100,458, 0,276, +,+, 731728 Simple_repeat Simple_repeat 585 chrUn_NT_476254v1 2726 3206 (CGAGG)n 445 + 2726 3206 0 2 175,272, 0,208, +,+, 731731 Simple_repeat Simple_repeat 585 chrUn_NT_476256v1 937 1310 (CAAGG)n 464 + 937 1310 0 2 131,61, 0,312, +,+, 731742 Simple_repeat Simple_repeat 585 chrUn_NT_476256v1 1314 1981 (CGAGG)n 578 + 1314 1981 0 3 184,176,268, 0,223,399, +,+,+, 731744 Simple_repeat Simple_repeat 585 chrUn_NT_476256v1 2743 3285 (CGAGG)n 525 + 2743 3285 0 3 191,172,8, 0,216,534, +,+,+, 731749 Simple_repeat Simple_repeat 585 chrUn_NT_476257v1 752 3286 GGXHOI 555 - 752 3286 0 3 1624,421,16, 0,1658,2518, -,-,-, 731753 Satellite W-chromosome 585 chrUn_NT_476258v1 2690 3275 GGXHOI 342 - 2690 3275 0 3 168,124,259, 0,179,326, -,-,-, 731756 Satellite W-chromosome 585 chrUn_NT_476261v1 1146 1803 (ACCCATAGGG)n 467 - 1146 1803 0 2 95,540, 0,117, -,-, 731772 Satellite Satellite 585 chrUn_NT_476264v1 2092 2668 (CGAGG)n 458 + 2092 2668 0 3 177,174,186, 0,196,390, +,+,+, 731788 Simple_repeat Simple_repeat 585 chrUn_NT_476265v1 131 398 (ACCCATAGAG)n 670 - 131 398 0 2 124,19, 0,248, -,-, 731793 Satellite Satellite 585 chrUn_NT_476265v1 472 857 (CTCTATGGGG)n 775 + 472 857 0 3 124,103,25, 0,135,360, +,+,+, 731795 Satellite Satellite 585 chrUn_NT_476265v1 858 1561 (ACCCCATAGGG)n 630 - 858 1561 0 2 236,286, 0,417, -,-, 731797 Satellite Satellite 585 chrUn_NT_476265v1 1617 2248 (ACCCCATAGGG)n 662 - 1617 2248 0 2 252,238, 0,393, -,-, 731800 Satellite Satellite 585 chrUn_NT_476265v1 2517 3285 (ACCCCATAGGG)n 669 - 2517 3285 0 3 394,186,28, 0,409,740, -,-,-, 731805 Satellite Satellite 585 chrUn_NT_476266v1 2188 2606 (TTAGGG)n 584 + 2188 2606 0 2 190,228, 0,190, +,+, 731812 Simple_repeat Simple_repeat 585 chrUn_NT_476266v1 2708 3284 (TTAGGG)n 763 + 2708 3284 0 2 366,188, 0,388, +,+, 731814 Simple_repeat Simple_repeat 585 chrUn_NT_476268v1 734 3149 (CGAGG)n 526 + 734 3149 0 6 353,183,193,178,1165,183, 0,367,565,799,1016,2232, +,+,+,+,+,+, 731818 Simple_repeat Simple_repeat 585 chrUn_NT_476270v1 1232 1994 (CGAGG)n 538 + 1232 1994 0 4 176,177,173,177, 0,205,398,585, +,+,+,+, 731830 Simple_repeat Simple_repeat 585 chrUn_NT_476270v1 2507 2921 (CGAGG)n 558 + 2507 2921 0 2 177,177, 0,237, +,+, 731832 Simple_repeat Simple_repeat 585 chrUn_NT_476274v1 698 1851 GGXHOI 351 - 698 1851 0 3 506,404,172, 0,562,981, -,-,-, 731840 Satellite W-chromosome 585 chrUn_NT_476274v1 1966 3271 GGXHOI 388 - 1966 3271 0 4 134,134,126,828, 0,146,337,477, -,-,-,-, 731841 Satellite W-chromosome 585 chrUn_NT_476275v1 2608 3263 GGXHOI 265 - 2608 3263 0 2 119,488, 0,167, -,-, 731846 Satellite W-chromosome 585 chrUn_NT_476276v1 1059 1305 (ACCCCATAGGG)n 115 - 1059 1305 0 2 99,99, 0,147, -,-, 731849 Satellite Satellite 585 chrUn_NT_476276v1 2997 3238 (ACCCCATAGGG)n 184 - 2997 3238 0 2 99,86, 0,155, -,-, 731853 Satellite Satellite 585 chrUn_NT_476278v1 2589 3271 GGXHOI 333 - 2589 3271 0 2 500,161, 0,521, -,-, 731860 Satellite W-chromosome 585 chrUn_NT_476283v1 973 1246 (CCCCATTGGG)n 339 + 973 1246 0 2 114,102, 0,171, +,+, 731874 Satellite Satellite 585 chrUn_NT_476289v1 590 908 (CTCTATGGGG)n 718 - 590 908 0 2 140,110, 0,208, -,-, 731895 Satellite Satellite 585 chrUn_NT_476289v1 919 1501 (CTCTATGGGG)n 693 + 919 1501 0 4 156,180,113,16, 0,156,336,566, +,+,+,+, 731897 Satellite Satellite 585 chrUn_NT_476289v1 1518 2205 (CTCTATGGGG)n 685 - 1518 2205 0 3 130,46,237, 0,363,450, -,-,-, 731899 Satellite Satellite 585 chrUn_NT_476289v1 2198 2590 (CTCTATGGGG)n 644 + 2198 2590 0 2 139,253, 0,139, +,+, 731903 Satellite Satellite 585 chrUn_NT_476290v1 2682 2840 (CTCCA)n 238 + 2682 2840 0 2 44,67, 0,91, +,+, 731922 Simple_repeat Simple_repeat 585 chrUn_NT_476294v1 255 1083 (CCCTAA)n 544 + 255 1083 0 2 462,351, 0,477, +,+, 731959 Simple_repeat Simple_repeat 585 chrUn_NT_476296v1 445 2107 (TTAGGG)n 583 + 445 2107 0 6 217,196,186,379,303,129, 0,235,454,676,1055,1533, +,+,+,+,+,+, 731966 Simple_repeat Simple_repeat 585 chrUn_NT_476296v1 2972 3256 (TTAGGG)n 678 + 2972 3256 0 2 179,91, 0,193, +,+, 731971 Simple_repeat Simple_repeat 585 chrUn_NT_476298v1 1350 1753 (CGAGG)n 495 + 1350 1753 0 2 180,178, 0,225, +,+, 731982 Simple_repeat Simple_repeat 585 chrUn_NT_476298v1 2050 3250 (CGAGG)n 502 + 2050 3250 0 4 306,316,128,59, 0,340,838,1141, +,+,+,+, 731984 Simple_repeat Simple_repeat 585 chrUn_NT_476302v1 395 1450 GGXHOI 356 - 395 1450 0 3 138,371,504, 0,150,551, -,-,-, 732000 Satellite W-chromosome 585 chrUn_NT_476302v1 2065 3235 GGXHOI 312 - 2065 3235 0 4 125,123,537,292, 0,172,324,878, -,-,-,-, 732002 Satellite W-chromosome 585 chrUn_NT_476305v1 1121 1413 (CTCTATGGGG)n 532 - 1121 1413 0 2 122,123, 0,169, -,-, 732011 Satellite Satellite 585 chrUn_NT_476305v1 1361 1563 (GCCCCACAGCT)n 505 + 1361 1563 0 2 59,96, 0,106, +,+, 732012 Satellite Satellite 585 chrUn_NT_476305v1 1781 1982 (GCCCCACAGCT)n 288 + 1781 1982 0 2 68,75, 0,126, +,+, 732017 Satellite Satellite 585 chrUn_NT_476305v1 2209 2493 (GCCCCACAGCT)n 426 + 2209 2493 0 2 70,50, 0,234, +,+, 732021 Satellite Satellite 585 chrUn_NT_476309v1 1013 1231 (CCACT)n 328 + 1013 1231 0 2 65,106, 0,112, +,+, 732044 Simple_repeat Simple_repeat 585 chrUn_NT_476319v1 1001 1614 GGXHOI 416 - 1001 1614 0 2 321,247, 0,366, -,-, 732088 Satellite W-chromosome 585 chrUn_NT_476321v1 2222 3236 GGLTR10D-int 947 - 2222 3236 0 2 364,647, 0,367, -,-, 732097 LTR ERVK 585 chrUn_NT_476322v1 1353 2005 (CGAGG)n 467 + 1353 2005 0 3 183,223,180, 0,220,472, +,+,+, 732103 Simple_repeat Simple_repeat 585 chrUn_NT_476326v1 1757 3017 GGXHOI 379 - 1757 3017 0 2 465,778, 0,482, -,-, 732124 Satellite W-chromosome 585 chrUn_NT_476327v1 381 1543 (GCATG)n 557 + 381 1543 0 4 217,122,206,187, 0,439,584,975, +,+,+,+, 732128 Simple_repeat Simple_repeat 585 chrUn_NT_476329v1 540 2708 GGXHOI 353 - 540 2708 0 2 1067,1038, 0,1130, -,-, 732133 Satellite W-chromosome 585 chrUn_NT_476334v1 1544 3185 GGXHOI 407 + 1544 3185 0 2 699,886, 0,755, +,+, 732158 Satellite W-chromosome 585 chrUn_NT_476336v1 741 1344 GGXHOI 371 - 741 1344 0 2 250,341, 0,262, -,-, 732164 Satellite W-chromosome 585 chrUn_NT_476342v1 695 1532 (TTAGGG)n 605 + 695 1532 0 4 174,191,180,179, 0,215,454,658, +,+,+,+, 732185 Simple_repeat Simple_repeat 585 chrUn_NT_476342v1 1615 3219 (TTAGGG)n 563 + 1615 3219 0 6 157,13,523,276,146,6, 0,364,433,1018,1294,1598, +,+,+,+,+,+, 732186 Simple_repeat Simple_repeat 585 chrUn_NT_476350v1 2020 2721 (TTAGGG)n 536 + 2020 2721 0 2 343,343, 0,358, +,+, 732203 Simple_repeat Simple_repeat 585 chrUn_NT_476351v1 867 1418 (ACCCCATAGGG)n 316 - 867 1418 0 3 159,161,174, 0,193,377, -,-,-, 732208 Satellite Satellite 585 chrUn_NT_476352v1 569 2792 GGXHOI 408 + 569 2792 0 3 795,1025,339, 0,811,1884, +,+,+, 732215 Satellite W-chromosome 585 chrUn_NT_476357v1 361 1627 GGXHOI 401 + 361 1627 0 4 179,141,123,785, 0,190,343,481, +,+,+,+, 732228 Satellite W-chromosome 585 chrUn_NT_476360v1 1608 2310 (TTAGGG)n 650 + 1608 2310 0 2 180,493, 0,209, +,+, 732236 Simple_repeat Simple_repeat 585 chrUn_NT_476360v1 2348 3208 (TTAGGG)n 576 + 2348 3208 0 4 200,180,60,173, 0,246,449,687, +,+,+,+, 732238 Simple_repeat Simple_repeat 585 chrUn_NT_476365v1 1715 3199 GGXHOI 377 + 1715 3199 0 2 1077,344, 0,1140, +,+, 732263 Satellite W-chromosome 585 chrUn_NT_476367v1 366 1967 GGXHOI 300 - 366 1967 0 2 422,1132, 0,469, -,-, 732273 Satellite W-chromosome 585 chrUn_NT_476367v1 2048 3189 GGXHOI 385 - 2048 3189 0 3 479,125,474, 0,496,667, -,-,-, 732274 Satellite W-chromosome 585 chrUn_NT_476368v1 2512 3154 GGXHOI 406 - 2512 3154 0 2 174,436, 0,206, -,-, 732279 Satellite W-chromosome 585 chrUn_NT_476374v1 1857 3201 GGXHOI 397 - 1857 3201 0 2 284,1047, 0,297, -,-, 732293 Satellite W-chromosome 585 chrUn_NT_476378v1 85 625 (CTCTATGGGG)n 684 + 85 625 0 4 123,114,11,60, 0,151,347,480, +,+,+,+, 732300 Satellite Satellite 585 chrUn_NT_476378v1 1091 1430 (ACCCATAGAG)n 627 . 1091 1430 0 2 180,154, 0,185, -,+, 732305 Satellite Satellite 585 chrUn_NT_476378v1 1792 2018 (CTCTATGGGG)n 422 + 1792 2018 0 2 95,34, 0,192, +,+, 732309 Satellite Satellite 585 chrUn_NT_476378v1 2595 3051 (ACCCATAGAG)n 441 - 2595 3051 0 3 71,204,60, 0,71,396, -,-,-, 732314 Satellite Satellite 585 chrUn_NT_476379v1 486 1343 GGXHOI 375 + 486 1343 0 2 245,597, 0,260, +,+, 732318 Satellite W-chromosome 585 chrUn_NT_476379v1 1631 2727 GGXHOI 349 + 1631 2727 0 2 129,918, 0,178, +,+, 732320 Satellite W-chromosome 585 chrUn_NT_476382v1 2868 3195 GGERV10_LTR 972 + 2868 3195 0 2 37,289, 0,38, +,+, 732336 LTR ERVL 585 chrUn_NT_476386v1 688 3121 GGXHOI 384 - 688 3121 0 3 730,1133,530, 0,750,1903, -,-,-, 732341 Satellite W-chromosome 585 chrUn_NT_476387v1 1429 1705 (ACCCATAGAG)n 594 + 1429 1705 0 2 116,112, 0,164, +,+, 732348 Satellite Satellite 585 chrUn_NT_476387v1 1778 2080 (ACCCATAGAG)n 624 + 1778 2080 0 2 112,135, 0,167, +,+, 732349 Satellite Satellite 585 chrUn_NT_476387v1 2878 3179 (ACCCATAGAG)n 593 + 2878 3179 0 2 103,136, 0,165, +,+, 732355 Satellite Satellite 585 chrUn_NT_476391v1 727 1145 GGXHOI 564 - 727 1145 0 2 17,75, 0,343, -,-, 732368 Satellite W-chromosome 585 chrUn_NT_476391v1 1749 2819 GGXHOI 532 - 1749 2819 0 2 473,160, 0,910, -,-, 732372 Satellite W-chromosome 585 chrUn_NT_476394v1 1065 1487 (TTAGGG)n 466 + 1065 1487 0 2 192,195, 0,227, +,+, 732386 Simple_repeat Simple_repeat 585 chrUn_NT_476397v1 887 3159 GGXHOI 408 - 887 3159 0 2 1602,644, 0,1628, -,-, 732399 Satellite W-chromosome 585 chrUn_NT_476399v1 1756 2324 GGXHOI 466 + 1756 2324 0 3 129,140,265, 0,151,303, +,+,+, 732405 Satellite W-chromosome 585 chrUn_NT_476401v1 463 907 (TTAGGG)n 725 + 463 907 0 2 257,175, 0,269, +,+, 732419 Simple_repeat Simple_repeat 585 chrUn_NT_476401v1 993 2794 (TTAGGG)n 615 + 993 2794 0 7 233,175,195,255,115,210,188, 0,396,571,807,1242,1357,1613, +,+,+,+,+,+,+, 732421 Simple_repeat Simple_repeat 585 chrUn_NT_476402v1 316 503 (C)n 742 + 316 503 0 3 34,24,31, 0,81,156, +,+,+, 732428 Simple_repeat Simple_repeat 585 chrUn_NT_476403v1 442 3179 GGXHOI 396 - 442 3179 0 2 576,2104, 0,633, -,-, 732432 Satellite W-chromosome 585 chrUn_NT_476404v1 428 892 (ACCCATAGGG)n 660 + 428 892 0 2 165,299, 0,165, +,+, 732436 Satellite Satellite 585 chrUn_NT_476404v1 2014 2256 (ACCCATAGGG)n 589 + 2014 2256 0 2 110,121, 0,121, +,+, 732441 Satellite Satellite 585 chrUn_NT_476404v1 2658 3025 (ACCCATAGGG)n 674 + 2658 3025 0 2 167,76, 0,291, +,+, 732443 Satellite Satellite 585 chrUn_NT_476407v1 20 3175 GGXHOI 532 - 20 3175 0 5 554,192,299,296,77, 0,876,1377,2460,3078, -,-,-,-,-, 732452 Satellite W-chromosome 585 chrUn_NT_476415v1 2720 3177 GGXHOI 380 - 2720 3177 0 2 228,194, 0,263, -,-, 732474 Satellite W-chromosome 585 chrUn_NT_476427v1 508 1041 (CCTTG)n 652 + 508 1041 0 2 261,95, 0,438, +,+, 732519 Simple_repeat Simple_repeat 585 chrUn_NT_476427v1 967 1375 (GCCTG)n 566 + 967 1375 0 2 125,105, 0,303, +,+, 732521 Simple_repeat Simple_repeat 585 chrUn_NT_476427v1 1288 1693 (CCTTG)n 700 + 1288 1693 0 2 180,225, 0,180, +,+, 732523 Simple_repeat Simple_repeat 585 chrUn_NT_476427v1 2470 3153 (CCTTG)n 641 + 2470 3153 0 3 209,41,184, 0,434,499, +,+,+, 732529 Simple_repeat Simple_repeat 585 chrUn_NT_476430v1 1459 2725 GGXHOI 368 - 1459 2725 0 4 528,142,119,400, 0,545,722,866, -,-,-,-, 732537 Satellite W-chromosome 585 chrUn_NT_476439v1 2489 3148 GGXHOI 459 + 2489 3148 0 3 306,193,130, 0,318,529, +,+,+, 732577 Satellite W-chromosome 585 chrUn_NT_476441v1 1342 3078 GGXHOI 367 - 1342 3078 0 2 1032,645, 0,1091, -,-, 732592 Satellite W-chromosome 585 chrUn_NT_476446v1 817 1138 (CTCTATGGGG)n 544 - 817 1138 0 2 165,133, 0,188, -,-, 732603 Satellite Satellite 585 chrUn_NT_476446v1 1143 1406 (CTCTATGGGG)n 574 + 1143 1406 0 2 99,49, 0,214, +,+, 732604 Satellite Satellite 585 chrUn_NT_476446v1 1855 2542 (CTCTATGGGG)n 681 - 1855 2542 0 4 115,146,141,138, 0,170,358,549, -,-,-,-, 732608 Satellite Satellite 585 chrUn_NT_476449v1 2047 3129 GGXHOI 376 - 2047 3129 0 2 358,695, 0,387, -,-, 732628 Satellite W-chromosome 585 chrUn_NT_476452v1 316 1427 (CAAGG)n 629 + 316 1427 0 4 212,168,23,358, 0,212,556,753, +,+,+,+, 732634 Simple_repeat Simple_repeat 585 chrUn_NT_476452v1 1468 2730 (CAAGG)n 590 + 1468 2730 0 5 470,84,73,181,184, 0,470,773,857,1078, +,+,+,+,+, 732638 Simple_repeat Simple_repeat 585 chrUn_NT_476455v1 445 862 (ACCCCATAGGG)n 471 - 445 862 0 3 99,91,111, 0,152,306, -,-,-, 732648 Satellite Satellite 585 chrUn_NT_476455v1 1367 1622 (ACCCCATAGGG)n 472 - 1367 1622 0 2 108,92, 0,163, -,-, 732651 Satellite Satellite 585 chrUn_NT_476459v1 931 1930 (CCCTAA)n 630 + 931 1930 0 5 192,197,172,201,189, 0,192,413,585,810, +,+,+,+,+, 732664 Simple_repeat Simple_repeat 585 chrUn_NT_476464v1 1141 1767 GGXHOI 402 - 1141 1767 0 3 137,176,281, 0,153,345, -,-,-, 732673 Satellite W-chromosome 585 chrUn_NT_476464v1 1850 3132 GGXHOI 348 - 1850 3132 0 4 372,143,120,525, 0,427,587,757, -,-,-,-, 732674 Satellite W-chromosome 585 chrUn_NT_476470v1 13 2123 GGXHOI 504 + 13 2123 0 2 1300,147, 0,1963, +,+, 732689 Satellite W-chromosome 585 chrUn_NT_476477v1 2421 2794 (ACCCCATAGGG)n 323 + 2421 2794 0 2 157,155, 0,218, +,+, 732720 Satellite Satellite 585 chrUn_NT_476481v1 587 2459 GGXHOI 403 + 587 2459 0 3 1324,162,317, 0,1364,1555, +,+,+, 732730 Satellite W-chromosome 585 chrUn_NT_476483v1 804 1926 CR1-F2 855 - 804 1926 0 2 472,650, 0,472, -,-, 732734 LINE CR1 585 chrUn_NT_476484v1 1405 1729 (ACCCCATAGGG)n 321 - 1405 1729 0 2 167,146, 0,178, -,-, 732741 Satellite Satellite 585 chrUn_NT_476484v1 2203 2740 (ACCCCATAGGG)n 338 - 2203 2740 0 3 152,160,148, 0,186,389, -,-,-, 732743 Satellite Satellite 585 chrUn_NT_476487v1 1903 3037 CR1-C2 540 + 1903 3037 0 2 131,83, 0,1051, +,+, 732748 LINE CR1 585 chrUn_NT_476488v1 2840 3092 (GTTCTTTCC)n 955 + 2840 3092 0 3 52,42,51, 0,112,201, +,+,+, 732755 Simple_repeat Simple_repeat 585 chrUn_NT_476489v1 447 3084 GGXHOI 442 - 447 3084 0 5 635,671,920,139,181, 0,646,1336,2278,2456, -,-,-,-,-, 732757 Satellite W-chromosome 585 chrUn_NT_476493v1 375 772 (CAAGG)n 661 + 375 772 0 2 179,182, 0,215, +,+, 732775 Simple_repeat Simple_repeat 585 chrUn_NT_476493v1 2053 3014 (CAAGG)n 583 + 2053 3014 0 4 166,20,6,363, 0,342,554,598, +,+,+,+, 732784 Simple_repeat Simple_repeat 585 chrUn_NT_476497v1 778 1826 GGXHOI 468 + 778 1826 0 2 175,622, 0,426, +,+, 732807 Satellite W-chromosome 585 chrUn_NT_476502v1 792 3100 GGXHOI 374 - 792 3100 0 2 479,1809, 0,499, -,-, 732836 Satellite W-chromosome 585 chrUn_NT_476503v1 275 895 GGXHOI 383 + 275 895 0 2 432,137, 0,483, +,+, 732838 Satellite W-chromosome 585 chrUn_NT_476503v1 979 1464 GGXHOI 325 + 979 1464 0 2 225,209, 0,276, +,+, 732839 Satellite W-chromosome 585 chrUn_NT_476503v1 1544 3080 GGXHOI 390 + 1544 3080 0 4 333,320,453,334, 0,348,709,1202, +,+,+,+, 732840 Satellite W-chromosome 585 chrUn_NT_476512v1 42 1874 (TTAGGG)n 593 + 42 1874 0 5 245,223,196,563,391, 0,282,505,701,1441, +,+,+,+,+, 732855 Simple_repeat Simple_repeat 585 chrUn_NT_476513v1 1133 3097 GGXHOI 395 + 1133 3097 0 2 875,1051, 0,913, +,+, 732865 Satellite W-chromosome 585 chrUn_NT_476514v1 2337 3078 (ACCCATTGGG)n 624 + 2337 3078 0 2 441,49, 0,692, +,+, 732870 Satellite Satellite 585 chrUn_NT_476517v1 2343 3090 GGXHOI 371 - 2343 3090 0 2 262,439, 0,308, -,-, 732877 Satellite W-chromosome 585 chrUn_NT_476520v1 95 1926 (TTAGGG)n 635 + 95 1926 0 6 286,196,378,509,211,178, 0,286,523,901,1410,1653, +,+,+,+,+,+, 732882 Simple_repeat Simple_repeat 585 chrUn_NT_476520v1 2013 3061 (TTAGGG)n 662 + 2013 3061 0 4 195,90,177,362, 0,381,489,686, +,+,+,+, 732884 Simple_repeat Simple_repeat 585 chrUn_NT_476521v1 2327 3070 GGXHOI 394 - 2327 3070 0 3 135,128,417, 0,176,326, -,-,-, 732889 Satellite W-chromosome 585 chrUn_NT_476522v1 1746 3095 GGXHOI 393 - 1746 3095 0 3 922,254,134, 0,950,1215, -,-,-, 732891 Satellite W-chromosome 585 chrUn_NT_476523v1 365 830 (CAAGG)n 596 + 365 830 0 3 45,226,172, 0,45,293, +,+,+, 732894 Simple_repeat Simple_repeat 585 chrUn_NT_476523v1 829 1230 (CCTTG)n 561 + 829 1230 0 2 206,195, 0,206, +,+, 732895 Simple_repeat Simple_repeat 585 chrUn_NT_476523v1 2147 2679 (CAAGG)n 574 + 2147 2679 0 3 44,222,241, 0,44,291, +,+,+, 732900 Simple_repeat Simple_repeat 585 chrUn_NT_476525v1 2116 2544 (ACCCCATAGGG)n 524 + 2116 2544 0 2 151,77, 0,351, +,+, 732913 Satellite Satellite 585 chrUn_NT_476526v1 1047 3081 GGXHOI 388 + 1047 3081 0 5 235,232,367,456,534, 0,297,566,996,1500, +,+,+,+,+, 732918 Satellite W-chromosome 585 chrUn_NT_476528v1 1946 2329 (CCCCATTGGG)n 497 + 1946 2329 0 2 110,273, 0,110, +,+, 732927 Satellite Satellite 585 chrUn_NT_476531v1 592 2985 GGXHOI 455 + 592 2985 0 5 385,921,568,252,182, 0,401,1363,1945,2211, +,+,+,+,+, 732941 Satellite W-chromosome 585 chrUn_NT_476532v1 2411 3075 GGXHOI 358 + 2411 3075 0 3 182,247,149, 0,244,515, +,+,+, 732945 Satellite W-chromosome 585 chrUn_NT_476533v1 2217 2672 CR1-H 667 - 2217 2672 0 2 162,293, 0,162, -,-, 732949 LINE CR1 585 chrUn_NT_476535v1 336 796 (CAAGG)n 412 + 336 796 0 2 97,175, 0,285, +,+, 732961 Simple_repeat Simple_repeat 585 chrUn_NT_476535v1 634 2258 (CGAGG)n 583 + 634 2258 0 6 407,12,83,36,188,201, 0,592,915,1199,1235,1423, +,+,+,+,+,+, 732963 Simple_repeat Simple_repeat 585 chrUn_NT_476535v1 2169 2539 (CAAGG)n 480 + 2169 2539 0 2 107,84, 0,286, +,+, 732968 Simple_repeat Simple_repeat 585 chrUn_NT_476537v1 407 3072 (TTAGGG)n 632 + 407 3072 0 7 352,185,301,689,470,203,8, 0,382,585,906,1784,2254,2657, +,+,+,+,+,+,+, 732979 Simple_repeat Simple_repeat 585 chrUn_NT_476540v1 1504 2939 GGXHOI 335 - 1504 2939 0 3 189,537,657, 0,225,778, -,-,-, 732999 Satellite W-chromosome 585 chrUn_NT_476543v1 756 1308 (CCTTG)n 577 + 756 1308 0 2 356,183, 0,369, +,+, 733004 Simple_repeat Simple_repeat 585 chrUn_NT_476543v1 1339 2296 (CCTTG)n 565 + 1339 2296 0 3 353,176,387, 0,369,570, +,+,+, 733006 Simple_repeat Simple_repeat 585 chrUn_NT_476543v1 2032 2352 (GCCTG)n 416 + 2032 2352 0 2 113,24, 0,296, +,+, 733007 Simple_repeat Simple_repeat 585 chrUn_NT_476543v1 2674 3077 (CCTTG)n 539 + 2674 3077 0 2 122,221, 0,182, +,+, 733013 Simple_repeat Simple_repeat 585 chrUn_NT_476546v1 107 3076 GGERV20_I-int 809 - 107 3076 0 3 2052,512,184, 0,2273,2785, -,-,-, 733018 LTR ERVL 585 chrUn_NT_476547v1 1229 3015 GGXHOI 343 - 1229 3015 0 3 975,420,358, 0,997,1428, -,-,-, 733022 Satellite W-chromosome 585 chrUn_NT_476549v1 1994 2417 (CGGA)n 422 + 1994 2417 0 2 192,215, 0,208, +,+, 733025 Simple_repeat Simple_repeat 585 chrUn_NT_476556v1 1146 2965 GGXHOI 353 - 1146 2965 0 2 577,1200, 0,619, -,-, 733046 Satellite W-chromosome 585 chrUn_NT_476561v1 1692 2117 GGXHOI 327 + 1692 2117 0 2 148,255, 0,170, +,+, 733053 Satellite W-chromosome 585 chrUn_NT_476562v1 830 2613 GGERV28_I-int 152 + 830 2613 0 2 259,412, 0,1371, +,+, 733056 LTR ERVK 585 chrUn_NT_476566v1 458 1089 GGXHOI 406 - 458 1089 0 2 456,129, 0,502, -,-, 733066 Satellite W-chromosome 585 chrUn_NT_476566v1 1558 3067 GGXHOI 363 - 1558 3067 0 2 293,1170, 0,339, -,-, 733068 Satellite W-chromosome 585 chrUn_NT_476568v1 1157 1762 (CCCTAA)n 564 + 1157 1762 0 3 177,169,50, 0,195,555, +,+,+, 733072 Simple_repeat Simple_repeat 585 chrUn_NT_476568v1 1860 3027 (CCCTAA)n 629 + 1860 3027 0 5 178,214,193,143,189, 0,190,415,631,978, +,+,+,+,+, 733074 Simple_repeat Simple_repeat 585 chrUn_NT_476570v1 379 1818 GGXHOI 369 + 379 1818 0 4 617,179,134,438, 0,634,829,1001, +,+,+,+, 733079 Satellite W-chromosome 585 chrUn_NT_476571v1 1322 2920 CR1-F 563 - 1322 2920 0 5 190,201,154,204,204, 0,235,727,1148,1394, -,-,-,-,-, 733086 LINE CR1 585 chrUn_NT_476572v1 1626 3030 (ACCCATAGGG)n 632 - 1626 3030 0 4 144,258,402,587, 0,144,402,817, -,-,-,-, 733096 Satellite Satellite 585 chrUn_NT_476574v1 1113 1861 (ACCCCATAGGG)n 610 + 1113 1861 0 4 279,137,12,22, 0,310,578,726, +,+,+,+, 733101 Satellite Satellite 585 chrUn_NT_476577v1 998 1118 (CAAC)n 464 + 998 1118 0 2 47,47, 0,73, +,+, 733118 Simple_repeat Simple_repeat 585 chrUn_NT_476579v1 232 905 (TTAGGG)n 697 + 232 905 0 3 93,164,191, 0,303,482, +,+,+, 733122 Simple_repeat Simple_repeat 585 chrUn_NT_476579v1 982 1371 (TTAGGG)n 662 + 982 1371 0 2 188,183, 0,206, +,+, 733125 Simple_repeat Simple_repeat 585 chrUn_NT_476579v1 1459 3047 (TTAGGG)n 581 + 1459 3047 0 7 120,43,178,195,193,181,199, 0,433,493,713,956,1161,1389, +,+,+,+,+,+,+, 733127 Simple_repeat Simple_repeat 585 chrUn_NT_476581v1 352 1481 GGXHOI 491 - 352 1481 0 5 155,150,314,168,208, 0,194,356,704,921, -,-,-,-,-, 733134 Satellite W-chromosome 585 chrUn_NT_476581v1 2069 3030 GGXHOI 365 - 2069 3030 0 4 134,131,158,453, 0,193,338,508, -,-,-,-, 733137 Satellite W-chromosome 585 chrUn_NT_476582v1 2451 2809 GGXHOI 412 + 2451 2809 0 2 182,165, 0,193, +,+, 733139 Satellite W-chromosome 585 chrUn_NT_476586v1 2633 3053 (GCATG)n 411 + 2633 3053 0 2 171,226, 0,194, +,+, 733151 Simple_repeat Simple_repeat 585 chrUn_NT_476592v1 892 1180 (CTCTATGGGG)n 558 - 892 1180 0 2 127,118, 0,170, -,-, 733167 Satellite Satellite 585 chrUn_NT_476592v1 1375 1620 (CTCTATGGGG)n 583 - 1375 1620 0 2 113,98, 0,147, -,-, 733169 Satellite Satellite 585 chrUn_NT_476592v1 1820 2043 (CTCTATGGGG)n 554 - 1820 2043 0 2 114,71, 0,152, -,-, 733171 Satellite Satellite 585 chrUn_NT_476599v1 1185 1980 (CGAGG)n 482 + 1185 1980 0 2 179,572, 0,223, +,+, 733208 Simple_repeat Simple_repeat 585 chrUn_NT_476605v1 922 1726 (TTAGGG)n 530 + 922 1726 0 3 189,365,187, 0,210,617, +,+,+, 733247 Simple_repeat Simple_repeat 585 chrUn_NT_476606v1 513 1864 (CCCTAA)n 548 + 513 1864 0 5 182,64,95,380,186, 0,402,480,767,1165, +,+,+,+,+, 733253 Simple_repeat Simple_repeat 585 chrUn_NT_476606v1 1916 2397 (CCCTAA)n 574 + 1916 2397 0 2 206,220, 0,261, +,+, 733257 Simple_repeat Simple_repeat 585 chrUn_NT_476608v1 1274 2323 GGXHOI 378 - 1274 2323 0 2 516,470, 0,579, -,-, 733264 Satellite W-chromosome 585 chrUn_NT_476610v1 554 848 (CTCTATGGGG)n 472 + 554 848 0 2 139,30, 0,264, +,+, 733277 Satellite Satellite 585 chrUn_NT_476610v1 888 1712 (ACCCCATAGGG)n 493 - 888 1712 0 3 262,181,338, 0,282,486, -,-,-, 733279 Satellite Satellite 585 chrUn_NT_476612v1 2700 3037 GGXHOI 246 + 2700 3037 0 2 246,77, 0,260, +,+, 733291 Satellite W-chromosome 585 chrUn_NT_476617v1 883 2576 GGXHOI 546 + 883 2576 0 3 597,287,192, 0,1203,1501, +,+,+, 733301 Satellite W-chromosome 585 chrUn_NT_476619v1 300 908 (ACCCATTGGG)n 499 - 300 908 0 4 115,117,116,118, 0,174,352,490, -,-,-,-, 733306 Satellite Satellite 585 chrUn_NT_476619v1 1010 1304 (ACCCATTGGG)n 527 - 1010 1304 0 2 116,117, 0,177, -,-, 733307 Satellite Satellite 585 chrUn_NT_476622v1 286 1580 GGXHOI 368 - 286 1580 0 2 954,324, 0,970, -,-, 733317 Satellite W-chromosome 585 chrUn_NT_476624v1 558 1881 (CGAGG)n 541 + 558 1881 0 4 179,559,288,203, 0,216,817,1120, +,+,+,+, 733338 Simple_repeat Simple_repeat 585 chrUn_NT_476630v1 2180 2537 (CACTG)n 305 + 2180 2537 0 2 155,184, 0,173, +,+, 733360 Simple_repeat Simple_repeat 585 chrUn_NT_476642v1 910 1397 (GCCCCACAGCT)n 407 - 910 1397 0 3 158,123,120, 0,221,367, -,-,-, 733389 Satellite Satellite 585 chrUn_NT_476642v1 1769 2479 (GCCCCACAGCT)n 434 - 1769 2479 0 4 113,126,190,138, 0,175,326,572, -,-,-,-, 733391 Satellite Satellite 585 chrUn_NT_476642v1 2790 2997 (GCCCCACAGCT)n 356 - 2790 2997 0 2 18,110, 0,97, -,-, 733393 Satellite Satellite 585 chrUn_NT_476655v1 628 2980 GGXHOI 348 - 628 2980 0 8 578,455,173,133,214,212,148,284, 0,592,1060,1250,1421,1651,1876,2068, -,-,-,-,-,-,-,-, 733444 Satellite W-chromosome 585 chrUn_NT_476656v1 286 785 (CAGTA)n 313 + 286 785 0 2 145,331, 0,168, +,+, 733447 Simple_repeat Simple_repeat 585 chrUn_NT_476657v1 1746 1934 A-rich 138 + 1746 1934 0 2 66,73, 0,115, +,+, 733453 Low_complexity Low_complexity 585 chrUn_NT_476662v1 1761 2786 (CCTTG)n 630 + 1761 2786 0 4 378,36,211,359, 0,391,433,666, +,+,+,+, 733485 Simple_repeat Simple_repeat 585 chrUn_NT_476665v1 2027 2251 (CTCTATGGGG)n 582 + 2027 2251 0 2 70,18, 0,206, +,+, 733495 Satellite Satellite 585 chrUn_NT_476665v1 2685 2987 (CTCTATGGGG)n 654 - 2685 2987 0 2 65,128, 0,174, -,-, 733500 Satellite Satellite 585 chrUn_NT_476669v1 1385 2016 GGXHOI 401 + 1385 2016 0 2 183,435, 0,196, +,+, 733506 Satellite W-chromosome 585 chrUn_NT_476673v1 2840 2975 CR1-Y2 599 + 2840 2975 0 2 65,53, 0,82, +,+, 733513 LINE CR1 585 chrUn_NT_476674v1 292 2984 GGXHOI 538 - 292 2984 0 5 138,163,703,184,687, 0,340,516,1541,2005, -,-,-,-,-, 733515 Satellite W-chromosome 585 chrUn_NT_476676v1 77 1019 (CCTCG)n 504 + 77 1019 0 2 539,349, 0,593, +,+, 733531 Simple_repeat Simple_repeat 585 chrUn_NT_476679v1 1575 1899 (ACCCCATAGGG)n 461 + 1575 1899 0 2 117,176, 0,148, +,+, 733550 Satellite Satellite 585 chrUn_NT_476680v1 1019 2962 GGXHOI 441 - 1019 2962 0 3 161,1503,217, 0,189,1726, -,-,-, 733557 Satellite W-chromosome 585 chrUn_NT_476681v1 514 977 GGXHOI 488 - 514 977 0 2 385,63, 0,400, -,-, 733559 Satellite W-chromosome 585 chrUn_NT_476681v1 1287 2272 GGXHOI 382 - 1287 2272 0 2 836,136, 0,849, -,-, 733561 Satellite W-chromosome 585 chrUn_NT_476683v1 1497 2206 GGXHOI 467 + 1497 2206 0 2 551,143, 0,566, +,+, 733565 Satellite W-chromosome 585 chrUn_NT_476684v1 1486 1911 GGXHOI 496 - 1486 1911 0 2 103,91, 0,334, -,-, 733571 Satellite W-chromosome 585 chrUn_NT_476684v1 2078 2954 GGXHOI 458 - 2078 2954 0 2 604,75, 0,801, -,-, 733573 Satellite W-chromosome 585 chrUn_NT_476686v1 990 2168 GGXHOI 358 + 990 2168 0 5 246,294,128,213,124, 0,281,609,786,1054, +,+,+,+,+, 733577 Satellite W-chromosome 585 chrUn_NT_476689v1 1110 2955 GGXHOI 459 + 1110 2955 0 2 1208,619, 0,1226, +,+, 733593 Satellite W-chromosome 585 chrUn_NT_476690v1 1201 1815 (CTCTATGGGG)n 317 - 1201 1815 0 3 134,135,249, 0,185,365, -,-,-, 733597 Satellite Satellite 585 chrUn_NT_476692v1 1519 2975 GGXHOI 351 + 1519 2975 0 4 396,351,475,151, 0,452,816,1305, +,+,+,+, 733601 Satellite W-chromosome 585 chrUn_NT_476701v1 1583 2477 GGXHOI 343 + 1583 2477 0 3 458,202,169, 0,504,725, +,+,+, 733627 Satellite W-chromosome 585 chrUn_NT_476704v1 268 779 (CTCTATGGGG)n 568 + 268 779 0 2 367,132, 0,379, +,+, 733635 Satellite Satellite 585 chrUn_NT_476704v1 1122 1400 (CTCTATGGGG)n 582 + 1122 1400 0 2 121,123, 0,155, +,+, 733638 Satellite Satellite 585 chrUn_NT_476704v1 1754 2078 (CTCTATGGGG)n 506 + 1754 2078 0 2 160,114, 0,210, +,+, 733641 Satellite Satellite 585 chrUn_NT_476704v1 2050 2370 (CTCTATGGGG)n 595 - 2050 2370 0 2 173,125, 0,195, -,-, 733642 Satellite Satellite 585 chrUn_NT_476704v1 2702 2967 (CTCTATGGGG)n 580 + 2702 2967 0 2 117,126, 0,139, +,+, 733645 Satellite Satellite 585 chrUn_NT_476706v1 1498 1653 (GAGTG)n 154 + 1498 1653 0 2 84,7, 0,148, +,+, 733651 Simple_repeat Simple_repeat 585 chrUn_NT_476706v1 1956 2154 A-rich 386 + 1956 2154 0 2 37,102, 0,96, +,+, 733654 Low_complexity Low_complexity 585 chrUn_NT_476706v1 2455 2650 A-rich 338 + 2455 2650 0 2 37,99, 0,96, +,+, 733656 Low_complexity Low_complexity 585 chrUn_NT_476710v1 1431 2121 GGXHOI 329 - 1431 2121 0 3 181,134,312, 0,199,378, -,-,-, 733664 Satellite W-chromosome 585 chrUn_NT_476710v1 2186 2895 GGXHOI 318 - 2186 2895 0 3 236,125,266, 0,279,443, -,-,-, 733665 Satellite W-chromosome 585 chrUn_NT_476713v1 2322 2962 (TTAGGG)n 724 + 2322 2962 0 2 408,23, 0,617, +,+, 733677 Simple_repeat Simple_repeat 585 chrUn_NT_476714v1 1161 1440 GGXHOI 254 + 1161 1440 0 2 95,129, 0,150, +,+, 733680 Satellite W-chromosome 585 chrUn_NT_476714v1 1533 2673 GGXHOI 394 + 1533 2673 0 5 137,307,134,319,136, 0,170,492,666,1004, +,+,+,+,+, 733681 Satellite W-chromosome 585 chrUn_NT_476716v1 72 488 GGLTR3G2 546 - 72 488 0 2 50,366, 0,50, -,-, 733683 LTR ERVL 585 chrUn_NT_476719v1 1019 2175 (TTAGGG)n 627 + 1019 2175 0 3 356,360,393, 0,375,763, +,+,+, 733693 Simple_repeat Simple_repeat 585 chrUn_NT_476723v1 1205 2954 CR1-F 571 + 1205 2954 0 7 179,189,200,201,202,204,59, 0,224,455,956,1198,1441,1690, +,+,+,+,+,+,+, 733711 LINE CR1 585 chrUn_NT_476725v1 1379 2168 GGXHOI 376 - 1379 2168 0 2 512,239, 0,550, -,-, 733714 Satellite W-chromosome 585 chrUn_NT_476725v1 2259 2899 GGXHOI 451 - 2259 2899 0 2 148,438, 0,202, -,-, 733715 Satellite W-chromosome 585 chrUn_NT_476729v1 679 1473 (CCTTG)n 437 + 679 1473 0 2 197,586, 0,208, +,+, 733723 Simple_repeat Simple_repeat 585 chrUn_NT_476735v1 560 1146 (CTCTATGGGG)n 712 - 560 1146 0 2 303,162, 0,424, -,-, 733744 Satellite Satellite 585 chrUn_NT_476735v1 1713 2027 (CTCTATGGGG)n 744 + 1713 2027 0 2 161,31, 0,283, +,+, 733751 Satellite Satellite 585 chrUn_NT_476738v1 919 2273 (CAAGG)n 613 + 919 2273 0 4 221,106,239,102, 0,399,522,1252, +,+,+,+, 733766 Simple_repeat Simple_repeat 585 chrUn_NT_476738v1 1680 2171 (CAGGC)n 484 + 1680 2171 0 2 215,100, 0,391, +,+, 733768 Simple_repeat Simple_repeat 585 chrUn_NT_476738v1 2361 2897 (CAAGG)n 624 + 2361 2897 0 2 320,32, 0,504, +,+, 733771 Simple_repeat Simple_repeat 585 chrUn_NT_476740v1 480 1389 CR1-H 673 - 480 1389 0 3 115,405,333, 0,115,576, -,-,-, 733786 LINE CR1 585 chrUn_NT_476741v1 1896 2937 GGXHOI 479 - 1896 2937 0 2 188,837, 0,204, -,-, 733788 Satellite W-chromosome 585 chrUn_NT_476744v1 1853 2476 GGXHOI 373 + 1853 2476 0 2 348,258, 0,365, +,+, 733800 Satellite W-chromosome 585 chrUn_NT_476747v1 1910 2286 (TGGA)n 603 + 1910 2286 0 2 175,186, 0,190, +,+, 733808 Simple_repeat Simple_repeat 585 chrUn_NT_476750v1 1469 2196 GGXHOI 383 - 1469 2196 0 3 305,150,240, 0,326,487, -,-,-, 733821 Satellite W-chromosome 585 chrUn_NT_476758v1 1639 2433 GGXHOI 538 - 1639 2433 0 2 277,39, 0,755, -,-, 733862 Satellite W-chromosome 585 chrUn_NT_476760v1 609 1951 CR1-C4 402 + 609 1951 0 2 758,261, 0,1081, +,+, 733878 LINE CR1 585 chrUn_NT_476760v1 2399 2915 GGERVL18-int 459 - 2399 2915 0 2 327,189, 0,327, -,-, 733882 LTR ERVL 585 chrUn_NT_476765v1 1155 1735 (GCCCCACAGCT)n 634 - 1155 1735 0 2 135,417, 0,163, -,-, 733905 Satellite Satellite 585 chrUn_NT_476765v1 2446 2845 (GCCCCACAGCT)n 473 - 2446 2845 0 2 126,235, 0,164, -,-, 733908 Satellite Satellite 585 chrUn_NT_476770v1 346 1709 GGXHOI 423 + 346 1709 0 2 624,700, 0,663, +,+, 733919 Satellite W-chromosome 585 chrUn_NT_476770v1 1827 2480 GGXHOI 394 + 1827 2480 0 2 343,292, 0,361, +,+, 733920 Satellite W-chromosome 585 chrUn_NT_476774v1 206 484 (ACCCATAGGG)n 382 - 206 484 0 2 124,113, 0,165, -,-, 733930 Satellite Satellite 585 chrUn_NT_476774v1 2620 2896 (ACCCATAGGG)n 441 - 2620 2896 0 2 115,115, 0,161, -,-, 733939 Satellite Satellite 585 chrUn_NT_476777v1 2172 2890 (CGAGG)n 569 + 2172 2890 0 2 336,363, 0,355, +,+, 733952 Simple_repeat Simple_repeat 585 chrUn_NT_476778v1 2555 2903 GGXHOI 306 + 2555 2903 0 2 102,235, 0,113, +,+, 733956 Satellite W-chromosome 585 chrUn_NT_476780v1 2017 2412 (CTCTATGGGG)n 654 - 2017 2412 0 2 136,98, 0,297, -,-, 733962 Satellite Satellite 585 chrUn_NT_476780v1 2344 2674 (ACCCATAGAG)n 538 + 2344 2674 0 2 120,89, 0,241, +,+, 733964 Satellite Satellite 585 chrUn_NT_476780v1 2624 2906 (CTCTATGGGG)n 692 - 2624 2906 0 2 123,115, 0,167, -,-, 733966 Satellite Satellite 585 chrUn_NT_476783v1 1398 2772 GGXHOI 399 - 1398 2772 0 3 464,734,136, 0,480,1238, -,-,-, 733973 Satellite W-chromosome 585 chrUn_NT_476790v1 1498 1891 (TTAGGG)n 641 + 1498 1891 0 2 198,184, 0,209, +,+, 733986 Simple_repeat Simple_repeat 585 chrUn_NT_476790v1 1945 2545 (TTAGGG)n 511 + 1945 2545 0 2 188,377, 0,223, +,+, 733988 Simple_repeat Simple_repeat 585 chrUn_NT_476791v1 2328 2890 GGXHOI 426 + 2328 2890 0 2 217,330, 0,232, +,+, 733992 Satellite W-chromosome 585 chrUn_NT_476794v1 1411 1898 (ACCCATAGGG)n 454 + 1411 1898 0 2 340,147, 0,340, +,+, 733999 Satellite Satellite 585 chrUn_NT_476794v1 2148 2870 (ACCCATAGGG)n 643 + 2148 2870 0 2 269,447, 0,275, +,+, 734001 Satellite Satellite 585 chrUn_NT_476802v1 509 1382 G-rich 347 + 509 1382 0 2 40,783, 0,90, +,+, 734013 Low_complexity Low_complexity 585 chrUn_NT_476810v1 900 2280 GGXHOI 550 + 900 2280 0 2 1048,132, 0,1248, +,+, 734036 Satellite W-chromosome 585 chrUn_NT_476815v1 317 1053 GGXHOI 348 + 317 1053 0 2 268,449, 0,287, +,+, 734054 Satellite W-chromosome 585 chrUn_NT_476815v1 1130 2347 GGXHOI 393 + 1130 2347 0 2 865,338, 0,879, +,+, 734055 Satellite W-chromosome 585 chrUn_NT_476818v1 1841 2888 GGXHOI 328 - 1841 2888 0 2 144,891, 0,156, -,-, 734066 Satellite W-chromosome 585 chrUn_NT_476819v1 1535 2854 GGXHOI 409 - 1535 2854 0 2 599,697, 0,622, -,-, 734070 Satellite W-chromosome 585 chrUn_NT_476820v1 1997 2318 (CACTC)n 144 + 1997 2318 0 2 46,237, 0,84, +,+, 734079 Simple_repeat Simple_repeat 585 chrUn_NT_476825v1 1237 2882 GGXHOI 396 - 1237 2882 0 4 676,133,496,265, 0,696,844,1380, -,-,-,-, 734094 Satellite W-chromosome 585 chrUn_NT_476827v1 1000 1912 (CCTTG)n 615 + 1000 1912 0 3 96,302,176, 0,421,736, +,+,+, 734106 Simple_repeat Simple_repeat 585 chrUn_NT_476827v1 1944 2631 (CCTTG)n 611 + 1944 2631 0 2 178,498, 0,189, +,+, 734110 Simple_repeat Simple_repeat 585 chrUn_NT_476828v1 584 2880 GGXHOI 443 - 584 2880 0 6 581,146,177,142,419,740, 0,610,772,965,1120,1556, -,-,-,-,-,-, 734114 Satellite W-chromosome 585 chrUn_NT_476831v1 779 2465 GGXHOI 450 - 779 2465 0 3 110,188,991, 0,448,695, -,-,-, 734121 Satellite W-chromosome 585 chrUn_NT_476836v1 1422 2092 (CATCC)n 601 + 1422 2092 0 2 191,463, 0,207, +,+, 734154 Simple_repeat Simple_repeat 585 chrUn_NT_476837v1 406 1224 (CAAGG)n 519 + 406 1224 0 2 483,278, 0,540, +,+, 734162 Simple_repeat Simple_repeat 585 chrUn_NT_476837v1 2064 2601 (CAGGC)n 544 + 2064 2601 0 2 244,109, 0,428, +,+, 734167 Simple_repeat Simple_repeat 585 chrUn_NT_476844v1 820 2865 (CCCTAA)n 571 + 820 2865 0 7 308,467,174,186,197,195,233, 0,497,990,1188,1385,1582,1812, +,+,+,+,+,+,+, 734200 Simple_repeat Simple_repeat 585 chrUn_NT_476848v1 331 1415 GGXHOI 384 - 331 1415 0 2 354,715, 0,369, -,-, 734208 Satellite W-chromosome 585 chrUn_NT_476848v1 1552 2738 GGXHOI 361 - 1552 2738 0 2 899,267, 0,919, -,-, 734209 Satellite W-chromosome 585 chrUn_NT_476850v1 1615 2033 (ACCCCATAGGG)n 440 - 1615 2033 0 2 252,129, 0,289, -,-, 734225 Satellite Satellite 585 chrUn_NT_476862v1 889 2551 GGXHOI 459 + 889 2551 0 2 408,1201, 0,461, +,+, 734270 Satellite W-chromosome 585 chrUn_NT_476865v1 823 2851 GGXHOI 380 - 823 2851 0 3 516,1080,306, 0,579,1722, -,-,-, 734275 Satellite W-chromosome 585 chrUn_NT_476871v1 1059 2377 GGXHOI 311 - 1059 2377 0 3 658,150,454, 0,692,864, -,-,-, 734287 Satellite W-chromosome 585 chrUn_NT_476872v1 1754 2097 (ACCCATAGGG)n 394 + 1754 2097 0 2 98,234, 0,109, +,+, 734295 Satellite Satellite 585 chrUn_NT_476874v1 291 1295 GGXHOI 519 + 291 1295 0 2 494,494, 0,510, +,+, 734305 Satellite W-chromosome 585 chrUn_NT_476874v1 1395 2068 GGXHOI 450 + 1395 2068 0 2 134,324, 0,349, +,+, 734306 Satellite W-chromosome 585 chrUn_NT_476876v1 1485 2841 GGXHOI 365 - 1485 2841 0 2 607,735, 0,621, -,-, 734311 Satellite W-chromosome 585 chrUn_NT_476878v1 370 856 GGXHOI 318 - 370 856 0 2 149,325, 0,161, -,-, 734314 Satellite W-chromosome 585 chrUn_NT_476878v1 959 1735 GGXHOI 408 - 959 1735 0 2 139,578, 0,198, -,-, 734315 Satellite W-chromosome 585 chrUn_NT_476883v1 553 1123 (CTCTATGGGG)n 564 - 553 1123 0 2 132,195, 0,375, -,-, 734330 Satellite Satellite 585 chrUn_NT_476883v1 1217 1530 (CTCTATGGGG)n 628 - 1217 1530 0 2 138,55, 0,258, -,-, 734333 Satellite Satellite 585 chrUn_NT_476883v1 2310 2625 (CTCTATGGGG)n 592 - 2310 2625 0 2 188,116, 0,199, -,-, 734342 Satellite Satellite 585 chrUn_NT_476886v1 2154 2840 (TTAGGG)n 640 + 2154 2840 0 2 364,281, 0,405, +,+, 734355 Simple_repeat Simple_repeat 585 chrUn_NT_476890v1 540 786 (ACCCATAGGG)n 589 - 540 786 0 2 118,111, 0,135, -,-, 734363 Satellite Satellite 585 chrUn_NT_476890v1 1123 1868 (ACCCCATAGGG)n 562 - 1123 1868 0 2 447,298, 0,447, -,-, 734366 Satellite Satellite 585 chrUn_NT_476890v1 2360 2846 (ACCCCATAGGG)n 354 - 2360 2846 0 4 99,82,76,74, 0,157,280,412, -,-,-,-, 734370 Satellite Satellite 585 chrUn_NT_476892v1 1464 2167 (ACCCCATAGGG)n 503 - 1464 2167 0 3 227,296,180, 0,227,523, -,-,-, 734375 Satellite Satellite 585 chrUn_NT_476898v1 985 2837 GGXHOI 342 - 985 2837 0 3 595,1106,120, 0,611,1732, -,-,-, 734410 Satellite W-chromosome 585 chrUn_NT_476900v1 578 2831 GGXHOI 433 - 578 2831 0 5 564,145,883,146,453, 0,577,737,1633,1800, -,-,-,-,-, 734421 Satellite W-chromosome 585 chrUn_NT_476902v1 157 503 (CCCCATTGGG)n 444 - 157 503 0 2 182,52, 0,294, -,-, 734426 Satellite Satellite 585 chrUn_NT_476902v1 1664 2214 (GCCCCACAGCT)n 400 + 1664 2214 0 3 131,228,129, 0,161,421, +,+,+, 734433 Satellite Satellite 585 chrUn_NT_476905v1 1279 1940 (CCCCATTGGG)n 416 + 1279 1940 0 2 23,140, 0,521, +,+, 734442 Satellite Satellite 585 chrUn_NT_476905v1 1515 1719 (ACCCATTGGG)n 394 + 1515 1719 0 2 61,55, 0,149, +,+, 734445 Satellite Satellite 585 chrUn_NT_476909v1 1218 1576 (CCTTG)n 503 + 1218 1576 0 2 178,167, 0,191, +,+, 734464 Simple_repeat Simple_repeat 585 chrUn_NT_476914v1 264 2823 (CCTTG)n 617 + 264 2823 0 8 349,189,198,194,106,116,149,213, 0,661,1020,1218,1412,1855,1987,2346, +,+,+,+,+,+,+,+, 734493 Simple_repeat Simple_repeat 585 chrUn_NT_476915v1 629 1293 (CCTTG)n 617 + 629 1293 0 3 212,67,200, 0,394,464, +,+,+, 734502 Simple_repeat Simple_repeat 585 chrUn_NT_476915v1 1367 2507 (CCTTG)n 617 + 1367 2507 0 3 334,392,376, 0,345,764, +,+,+, 734505 Simple_repeat Simple_repeat 585 chrUn_NT_476917v1 1734 2570 GGXHOI 433 + 1734 2570 0 4 142,57,322,236, 0,187,267,600, +,+,+,+, 734510 Satellite W-chromosome 585 chrUn_NT_476922v1 1025 2761 GGXHOI 384 + 1025 2761 0 5 252,217,469,464,269, 0,271,503,990,1467, +,+,+,+,+, 734527 Satellite W-chromosome 585 chrUn_NT_476925v1 1753 2817 GGXHOI 417 - 1753 2817 0 3 58,643,329, 0,78,735, -,-,-, 734543 Satellite W-chromosome 585 chrUn_NT_476928v1 1115 1902 (ACCCATAGAG)n 534 - 1115 1902 0 4 122,279,122,123, 0,148,484,664, -,-,-,-, 734548 Satellite Satellite 585 chrUn_NT_476928v1 2234 2498 (ACCCATAGAG)n 533 - 2234 2498 0 2 121,117, 0,147, -,-, 734550 Satellite Satellite 585 chrUn_NT_476931v1 1214 2637 GGXHOI 275 + 1214 2637 0 4 140,596,410,185, 0,190,803,1238, +,+,+,+, 734557 Satellite W-chromosome 585 chrUn_NT_476932v1 994 1286 (CTCTATGGGG)n 455 - 994 1286 0 2 135,115, 0,177, -,-, 734560 Satellite Satellite 585 chrUn_NT_476935v1 291 592 (CTCTATGGGG)n 364 - 291 592 0 2 144,94, 0,207, -,-, 734570 Satellite Satellite 585 chrUn_NT_476937v1 1703 2327 CR1-H 672 - 1703 2327 0 2 140,478, 0,146, -,-, 734576 LINE CR1 585 chrUn_NT_476943v1 548 2024 GGXHOI 334 + 548 2024 0 2 936,504, 0,972, +,+, 734604 Satellite W-chromosome 585 chrUn_NT_476944v1 1262 2799 GGXHOI 398 - 1262 2799 0 2 261,1259, 0,278, -,-, 734607 Satellite W-chromosome 585 chrUn_NT_476948v1 2069 2449 (GCATG)n 256 + 2069 2449 0 2 173,196, 0,184, +,+, 734614 Simple_repeat Simple_repeat 585 chrUn_NT_476952v1 420 854 (CTCTATGGGG)n 665 + 420 854 0 3 108,115,117, 0,160,317, +,+,+, 734629 Satellite Satellite 585 chrUn_NT_476952v1 1289 2061 (CTCTATGGGG)n 675 + 1289 2061 0 3 235,228,157, 0,277,615, +,+,+, 734632 Satellite Satellite 585 chrUn_NT_476953v1 716 1841 GGXHOI 380 - 716 1841 0 2 961,146, 0,979, -,-, 734640 Satellite W-chromosome 585 chrUn_NT_476954v1 944 2798 GGXHOI 536 - 944 2798 0 3 482,30,487, 0,909,1367, -,-,-, 734645 Satellite W-chromosome 585 chrUn_NT_476955v1 1960 2316 (ACCCCATAGGG)n 445 - 1960 2316 0 2 164,136, 0,220, -,-, 734658 Satellite Satellite 585 chrUn_NT_476958v1 981 1446 GGXHOI 359 + 981 1446 0 2 206,213, 0,252, +,+, 734671 Satellite W-chromosome 585 chrUn_NT_476958v1 1521 2145 GGXHOI 401 + 1521 2145 0 4 137,128,142,165, 0,155,301,459, +,+,+,+, 734672 Satellite W-chromosome 585 chrUn_NT_476959v1 1643 2783 GGXHOI 565 - 1643 2783 0 2 810,288, 0,852, -,-, 734678 Satellite W-chromosome 585 chrUn_NT_476960v1 1321 2786 GGXHOI 355 - 1321 2786 0 2 1156,292, 0,1173, -,-, 734680 Satellite W-chromosome 585 chrUn_NT_476965v1 995 1448 (CAAGG)n 477 + 995 1448 0 2 255,198, 0,255, +,+, 734714 Simple_repeat Simple_repeat 585 chrUn_NT_476967v1 905 2767 GGXHOI 422 + 905 2767 0 3 229,1443,111, 0,249,1751, +,+,+, 734729 Satellite W-chromosome 585 chrUn_NT_476968v1 1116 2761 GGXHOI 422 - 1116 2761 0 3 162,1108,343, 0,180,1302, -,-,-, 734731 Satellite W-chromosome 585 chrUn_NT_476970v1 832 2777 GGLTR3F1 810 - 832 2777 0 2 1911,30, 0,1915, -,-, 734733 LTR ERVL 585 chrUn_NT_476971v1 1928 2712 GGXHOI 303 + 1928 2712 0 2 375,365, 0,419, +,+, 734736 Satellite W-chromosome 585 chrUn_NT_476976v1 816 2762 GGXHOI 399 - 816 2762 0 2 964,964, 0,982, -,-, 734747 Satellite W-chromosome 585 chrUn_NT_476977v1 458 1043 (CCCCATTGGG)n 472 - 458 1043 0 2 118,40, 0,545, -,-, 734750 Satellite Satellite 585 chrUn_NT_476977v1 576 815 (CTCTATGGGG)n 580 - 576 815 0 2 70,51, 0,188, -,-, 734751 Satellite Satellite 585 chrUn_NT_476977v1 1244 2022 (ACCCATTGGG)n 512 + 1244 2022 0 5 137,1,21,11,11, 0,137,358,637,767, +,+,+,+,+, 734756 Satellite Satellite 585 chrUn_NT_476977v1 1762 2011 (ACCCATAGAG)n 580 + 1762 2011 0 2 119,119, 0,130, +,+, 734759 Satellite Satellite 585 chrUn_NT_476980v1 1183 2529 GGXHOI 308 + 1183 2529 0 2 124,1177, 0,169, +,+, 734770 Satellite W-chromosome 585 chrUn_NT_476982v1 1586 2043 (ACCCCATAGGG)n 347 + 1586 2043 0 3 129,109,109, 0,185,348, +,+,+, 734774 Satellite Satellite 585 chrUn_NT_476985v1 1153 2660 (CGAGG)n 533 + 1153 2660 0 3 886,189,351, 0,940,1156, +,+,+, 734784 Simple_repeat Simple_repeat 585 chrUn_NT_476988v1 1358 1725 GA-rich 318 + 1358 1725 0 2 55,247, 0,120, +,+, 734791 Low_complexity Low_complexity 585 chrUn_NT_476991v1 534 2761 GGXHOI 400 - 534 2761 0 3 781,586,815, 0,792,1412, -,-,-, 734801 Satellite W-chromosome 585 chrUn_NT_476993v1 200 1059 Sat-CR1_GG 186 - 200 1059 0 2 60,396, 0,463, -,-, 734803 Satellite Satellite 585 chrUn_NT_476993v1 1676 2760 GGXHOI 593 - 1676 2760 0 3 284,76,498, 0,494,586, -,-,-, 734807 Satellite W-chromosome 585 chrUn_NT_476995v1 2128 2705 (CCTTG)n 588 + 2128 2705 0 2 150,246, 0,331, +,+, 734821 Simple_repeat Simple_repeat 585 chrUn_NT_476999v1 945 2752 GGXHOI 431 + 945 2752 0 3 372,372,997, 0,389,810, +,+,+, 734833 Satellite W-chromosome 585 chrUn_NT_477000v1 1520 1980 (CCTTG)n 483 + 1520 1980 0 2 250,196, 0,264, +,+, 734842 Simple_repeat Simple_repeat 585 chrUn_NT_477003v1 758 1589 (TTAGGG)n 693 + 758 1589 0 3 129,136,379, 0,316,452, +,+,+, 734851 Simple_repeat Simple_repeat 585 chrUn_NT_477003v1 1676 2752 (TTAGGG)n 613 + 1676 2752 0 5 194,181,377,39,70, 0,212,393,791,1006, +,+,+,+,+, 734854 Simple_repeat Simple_repeat 585 chrUn_NT_477004v1 334 2501 GGERVL-B-int 698 + 334 2501 0 4 98,217,764,538, 0,648,865,1629, +,+,+,+, 734857 LTR ERVL 585 chrUn_NT_477005v1 1901 2340 CR1-F 530 - 1901 2340 0 2 199,198, 0,241, -,-, 734863 LINE CR1 585 chrUn_NT_477012v1 2276 2746 A-rich 511 + 2276 2746 0 2 48,364, 0,106, +,+, 734899 Low_complexity Low_complexity 585 chrUn_NT_477015v1 1035 1369 (CTCTATGGGG)n 622 - 1035 1369 0 2 118,183, 0,151, -,-, 734909 Satellite Satellite 585 chrUn_NT_477015v1 1780 2713 (CTCTATGGGG)n 717 + 1780 2713 0 4 163,137,102,436, 0,163,302,497, +,+,+,+, 734912 Satellite Satellite 585 chrUn_NT_477021v1 1795 2734 GGXHOI 572 + 1795 2734 0 3 112,221,11, 0,433,928, +,+,+, 734931 Satellite W-chromosome 585 chrUn_NT_477032v1 1701 1911 (GTTCTTTCC)n 946 + 1701 1911 0 2 111,46, 0,164, +,+, 734963 Simple_repeat Simple_repeat 585 chrUn_NT_477033v1 2500 2731 CR1-X 430 + 2500 2731 0 2 127,104, 0,127, +,+, 734965 LINE CR1 585 chrUn_NT_477034v1 1200 2182 GGXHOI 356 - 1200 2182 0 3 125,132,696, 0,140,286, -,-,-, 734968 Satellite W-chromosome 585 chrUn_NT_477035v1 750 2710 GGXHOI 362 + 750 2710 0 3 624,827,450, 0,640,1510, +,+,+, 734971 Satellite W-chromosome 585 chrUn_NT_477038v1 1656 2719 GGXHOI 371 + 1656 2719 0 3 690,162,173, 0,709,890, +,+,+, 734987 Satellite W-chromosome 585 chrUn_NT_477039v1 1337 1632 (CTCTATGGGG)n 551 - 1337 1632 0 2 155,140, 0,155, -,-, 734994 Satellite Satellite 585 chrUn_NT_477040v1 1390 1489 (G)n 892 + 1390 1489 0 2 22,30, 0,69, +,+, 735000 Simple_repeat Simple_repeat 585 chrUn_NT_477043v1 1347 1607 (CTCTATGGGG)n 708 - 1347 1607 0 2 112,31, 0,229, -,-, 735008 Satellite Satellite 585 chrUn_NT_477043v1 1897 2340 (ACCCATAGAG)n 666 + 1897 2340 0 2 126,317, 0,126, +,+, 735011 Satellite Satellite 585 chrUn_NT_477046v1 570 959 (CAGGC)n 484 + 570 959 0 2 182,207, 0,182, +,+, 735021 Simple_repeat Simple_repeat 585 chrUn_NT_477046v1 1494 1907 (CAGGC)n 561 + 1494 1907 0 2 187,211, 0,202, +,+, 735025 Simple_repeat Simple_repeat 585 chrUn_NT_477046v1 1891 2726 (CAAGG)n 560 + 1891 2726 0 4 179,234,189,181, 0,183,442,654, +,+,+,+, 735026 Simple_repeat Simple_repeat 585 chrUn_NT_477047v1 592 1591 (CCTTG)n 571 + 592 1591 0 4 328,79,220,205, 0,495,574,794, +,+,+,+, 735029 Simple_repeat Simple_repeat 585 chrUn_NT_477047v1 2125 2703 (CCTTG)n 609 + 2125 2703 0 3 184,165,31, 0,202,547, +,+,+, 735036 Simple_repeat Simple_repeat 585 chrUn_NT_477048v1 1616 2689 GGXHOI 363 - 1616 2689 0 3 190,535,265, 0,226,808, -,-,-, 735039 Satellite W-chromosome 585 chrUn_NT_477055v1 935 2697 GGXHOI 444 + 935 2697 0 2 1281,466, 0,1296, +,+, 735053 Satellite W-chromosome 585 chrUn_NT_477062v1 388 1503 CR1-B2 718 - 388 1503 0 2 888,224, 0,891, -,-, 735069 LINE CR1 585 chrUn_NT_477065v1 2166 2704 GGXHOI 340 + 2166 2704 0 2 346,181, 0,357, +,+, 735079 Satellite W-chromosome 585 chrUn_NT_477066v1 679 1766 GGXHOI 378 + 679 1766 0 2 901,151, 0,936, +,+, 735082 Satellite W-chromosome 585 chrUn_NT_477066v1 1866 2707 GGXHOI 349 + 1866 2707 0 3 188,121,506, 0,202,335, +,+,+, 735083 Satellite W-chromosome 585 chrUn_NT_477068v1 721 1819 GGXHOI 381 + 721 1819 0 2 342,741, 0,357, +,+, 735086 Satellite W-chromosome 585 chrUn_NT_477068v1 1932 2714 GGXHOI 375 + 1932 2714 0 2 416,330, 0,452, +,+, 735087 Satellite W-chromosome 585 chrUn_NT_477074v1 556 2614 GGXHOI 357 + 556 2614 0 3 1103,146,776, 0,1116,1282, +,+,+, 735096 Satellite W-chromosome 585 chrUn_NT_477076v1 2081 2354 (CTCTATGGGG)n 646 + 2081 2354 0 2 118,117, 0,156, +,+, 735113 Satellite Satellite 585 chrUn_NT_477077v1 96 660 (ACCCATAGGG)n 639 + 96 660 0 3 125,137,302, 0,125,262, +,+,+, 735115 Satellite Satellite 585 chrUn_NT_477077v1 999 2006 (ACCCATAGGG)n 559 + 999 2006 0 4 522,135,16,150, 0,532,780,857, +,+,+,+, 735118 Satellite Satellite 585 chrUn_NT_477077v1 2305 2703 (ACCCATAGGG)n 546 + 2305 2703 0 2 203,34, 0,364, +,+, 735123 Satellite Satellite 585 chrUn_NT_477081v1 189 793 (CGAGG)n 504 + 189 793 0 2 322,105, 0,499, +,+, 735142 Simple_repeat Simple_repeat 585 chrUn_NT_477084v1 896 1548 GGXHOI 382 + 896 1548 0 3 210,177,221, 0,243,431, +,+,+, 735160 Satellite W-chromosome 585 chrUn_NT_477086v1 1614 2694 GGXHOI 544 - 1614 2694 0 2 317,463, 0,617, -,-, 735170 Satellite W-chromosome 585 chrUn_NT_477087v1 896 1528 GGXHOI 442 + 896 1528 0 2 127,453, 0,179, +,+, 735173 Satellite W-chromosome 585 chrUn_NT_477087v1 1694 2171 GGXHOI 303 + 1694 2171 0 2 94,336, 0,141, +,+, 735174 Satellite W-chromosome 585 chrUn_NT_477089v1 900 998 (G)n 902 + 900 998 0 2 22,17, 0,81, +,+, 735180 Simple_repeat Simple_repeat 585 chrUn_NT_477089v1 1527 1917 (GGATG)n 716 + 1527 1917 0 2 187,183, 0,207, +,+, 735183 Simple_repeat Simple_repeat 585 chrUn_NT_477090v1 550 2701 GGXHOI 369 - 550 2701 0 5 136,816,179,583,311, 0,183,1045,1239,1840, -,-,-,-,-, 735190 Satellite W-chromosome 585 chrUn_NT_477102v1 2041 2686 (CAAGG)n 654 + 2041 2686 0 2 350,252, 0,393, +,+, 735233 Simple_repeat Simple_repeat 585 chrUn_NT_477106v1 384 2666 GGXHOI 534 + 384 2666 0 4 149,413,195,613, 0,347,1152,1669, +,+,+,+, 735238 Satellite W-chromosome 585 chrUn_NT_477107v1 1565 2682 GGLTR7-int 665 + 1565 2682 0 2 243,411, 0,706, +,+, 735243 LTR ERV1 585 chrUn_NT_477111v1 1401 1760 (ACCCATAGAG)n 700 - 1401 1760 0 2 204,34, 0,325, -,-, 735266 Satellite Satellite 585 chrUn_NT_477111v1 1991 2536 (ACCCCATAGGG)n 554 - 1991 2536 0 3 193,71,41, 0,312,504, -,-,-, 735269 Satellite Satellite 585 chrUn_NT_477114v1 1044 1784 GGXHOI 339 + 1044 1784 0 2 401,300, 0,440, +,+, 735280 Satellite W-chromosome 585 chrUn_NT_477114v1 1877 2675 GGXHOI 362 + 1877 2675 0 3 137,433,128, 0,195,670, +,+,+, 735281 Satellite W-chromosome 585 chrUn_NT_477115v1 947 1904 (ACCCCATAGGG)n 602 + 947 1904 0 5 185,58,243,113,128, 0,311,397,678,829, +,+,+,+,+, 735286 Satellite Satellite 585 chrUn_NT_477116v1 733 1904 GGXHOI 375 + 733 1904 0 2 964,148, 0,1023, +,+, 735291 Satellite W-chromosome 585 chrUn_NT_477117v1 1037 1392 (GCCCCACAGCT)n 584 - 1037 1392 0 2 188,45, 0,310, -,-, 735296 Satellite Satellite 585 chrUn_NT_477121v1 980 1538 (TTAGGG)n 589 + 980 1538 0 3 175,133,57, 0,189,501, +,+,+, 735315 Simple_repeat Simple_repeat 585 chrUn_NT_477121v1 1958 2652 (TTAGGG)n 620 + 1958 2652 0 2 362,321, 0,373, +,+, 735320 Simple_repeat Simple_repeat 585 chrUn_NT_477127v1 1106 2628 GGXHOI 409 - 1106 2628 0 2 458,1051, 0,471, -,-, 735328 Satellite W-chromosome 585 chrUn_NT_477131v1 1446 2633 GGXHOI 362 + 1446 2633 0 2 413,752, 0,435, +,+, 735332 Satellite W-chromosome 585 chrUn_NT_477134v1 1912 2666 GGXHOI 523 - 1912 2666 0 3 272,157,237, 0,311,517, -,-,-, 735340 Satellite W-chromosome 585 chrUn_NT_477135v1 2338 2664 GGXHOI 438 + 2338 2664 0 2 126,182, 0,144, +,+, 735345 Satellite W-chromosome 585 chrUn_NT_477137v1 1347 2298 GGXHOI 280 - 1347 2298 0 5 139,259,175,117,166, 0,153,457,648,785, -,-,-,-,-, 735350 Satellite W-chromosome 585 chrUn_NT_477139v1 396 2640 GGXHOI 371 - 396 2640 0 4 1267,255,482,166, 0,1290,1562,2078, -,-,-,-, 735355 Satellite W-chromosome 585 chrUn_NT_477142v1 137 718 (CCTCG)n 495 + 137 718 0 2 345,177, 0,404, +,+, 735361 Simple_repeat Simple_repeat 585 chrUn_NT_477142v1 724 1407 (CGCCT)n 370 + 724 1407 0 3 193,50,321, 0,237,362, +,+,+, 735362 Simple_repeat Simple_repeat 585 chrUn_NT_477143v1 639 1059 (TCCG)n 350 + 639 1059 0 2 145,96, 0,324, +,+, 735375 Simple_repeat Simple_repeat 585 chrUn_NT_477144v1 748 1728 CR1-B2 630 - 748 1728 0 2 773,207, 0,773, -,-, 735383 LINE CR1 585 chrUn_NT_477154v1 545 789 (ACCCATAGGG)n 422 - 545 789 0 2 118,114, 0,130, -,-, 735405 Satellite Satellite 585 chrUn_NT_477154v1 892 1418 (ACCCATAGGG)n 447 - 892 1418 0 4 117,119,115,110, 0,130,269,416, -,-,-,-, 735406 Satellite Satellite 585 chrUn_NT_477154v1 2316 2463 (TTGCA)n 1000 + 2316 2463 0 3 30,30,25, 0,61,122, +,+,+, 735411 Simple_repeat Simple_repeat 585 chrUn_NT_477158v1 1569 2646 GGXHOI 393 - 1569 2646 0 5 128,254,95,332,206, 0,142,408,516,871, -,-,-,-,-, 735420 Satellite W-chromosome 585 chrUn_NT_477161v1 817 2063 (CGAGG)n 510 + 817 2063 0 4 184,439,328,179, 0,233,728,1067, +,+,+,+, 735426 Simple_repeat Simple_repeat 585 chrUn_NT_477163v1 2091 2638 GGXHOI 410 - 2091 2638 0 2 335,163, 0,384, -,-, 735431 Satellite W-chromosome 585 chrUn_NT_477169v1 513 2635 GGXHOI 394 - 513 2635 0 7 364,301,140,242,184,448,309, 0,377,689,880,1137,1342,1813, -,-,-,-,-,-,-, 735439 Satellite W-chromosome 585 chrUn_NT_477173v1 1090 1553 GGLTR3F2 580 + 1090 1553 0 2 228,201, 0,262, +,+, 735447 LTR ERVL 585 chrUn_NT_477178v1 353 742 (ACCCCATAGGG)n 573 + 353 742 0 2 121,220, 0,169, +,+, 735461 Satellite Satellite 585 chrUn_NT_477178v1 1577 1857 (ACCCCATAGGG)n 308 - 1577 1857 0 2 110,115, 0,165, -,-, 735467 Satellite Satellite 585 chrUn_NT_477184v1 1927 2408 (CTCTATGGGG)n 565 + 1927 2408 0 3 114,121,139, 0,162,342, +,+,+, 735482 Satellite Satellite 585 chrUn_NT_477192v1 1533 1783 (GCCCCACAGCT)n 419 - 1533 1783 0 2 108,108, 0,142, -,-, 735516 Satellite Satellite 585 chrUn_NT_477199v1 209 423 (ACCCATAGGG)n 262 + 209 423 0 2 96,39, 0,175, +,+, 735532 Satellite Satellite 585 chrUn_NT_477199v1 561 792 (ACCCATAGGG)n 398 + 561 792 0 2 82,39, 0,192, +,+, 735535 Satellite Satellite 585 chrUn_NT_477199v1 1119 1462 (ACCCATAGGG)n 362 + 1119 1462 0 3 75,80,44, 0,160,299, +,+,+, 735539 Satellite Satellite 585 chrUn_NT_477199v1 1828 2027 (ACCCATAGAG)n 444 + 1828 2027 0 2 68,43, 0,156, +,+, 735543 Satellite Satellite 585 chrUn_NT_477199v1 2150 2324 (ACCCATAGGG)n 330 + 2150 2324 0 2 73,38, 0,136, +,+, 735546 Satellite Satellite 585 chrUn_NT_477199v1 2435 2609 (ACCCATAGGG)n 340 + 2435 2609 0 2 94,32, 0,142, +,+, 735549 Satellite Satellite 585 chrUn_NT_477201v1 1075 2104 GGXHOI 291 - 1075 2104 0 2 761,249, 0,780, -,-, 735553 Satellite W-chromosome 585 chrUn_NT_477203v1 1477 2601 GGXHOI 408 - 1477 2601 0 5 132,217,173,286,248, 0,149,382,574,876, -,-,-,-,-, 735557 Satellite W-chromosome 585 chrUn_NT_477211v1 1112 1695 (ACCCATAGAG)n 650 + 1112 1695 0 2 321,144, 0,439, +,+, 735577 Satellite Satellite 585 chrUn_NT_477215v1 439 2255 (ACCCATAGGG)n 670 + 439 2255 0 9 150,30,118,125,31,17,25,133,132, 0,523,572,711,1014,1382,1518,1543,1684, +,+,+,+,+,+,+,+,+, 735599 Satellite Satellite 585 chrUn_NT_477215v1 1484 1821 (ACCCATAGAG)n 666 + 1484 1821 0 2 120,97, 0,240, +,+, 735602 Satellite Satellite 585 chrUn_NT_477215v1 2336 2607 (ACCCATAGGG)n 674 + 2336 2607 0 2 133,20, 0,251, +,+, 735605 Satellite Satellite 585 chrUn_NT_477219v1 899 2362 GGXHOI 347 + 899 2362 0 5 622,158,291,95,138, 0,639,841,1174,1325, +,+,+,+,+, 735618 Satellite W-chromosome 585 chrUn_NT_477220v1 307 506 (ACCCATAGAG)n 432 - 307 506 0 2 40,82, 0,117, -,-, 735621 Satellite Satellite 585 chrUn_NT_477220v1 771 984 (ACCCATAGGG)n 370 - 771 984 0 2 44,84, 0,129, -,-, 735625 Satellite Satellite 585 chrUn_NT_477220v1 1276 2530 (ACCCATAGAG)n 369 - 1276 2530 0 3 34,59,62, 0,1058,1192, -,-,-, 735629 Satellite Satellite 585 chrUn_NT_477220v1 1427 1842 (ACCCATAGGG)n 267 - 1427 1842 0 3 154,48,85, 0,192,330, -,-,-, 735631 Satellite Satellite 585 chrUn_NT_477220v1 1989 2203 (ACCCATAGGG)n 392 - 1989 2203 0 2 43,87, 0,127, -,-, 735634 Satellite Satellite 585 chrUn_NT_477223v1 1164 1737 Sat-CR1_GG 136 + 1164 1737 0 2 183,153, 0,420, +,+, 735646 Satellite Satellite 585 chrUn_NT_477234v1 1681 2603 GGXHOI 413 + 1681 2603 0 2 684,224, 0,698, +,+, 735692 Satellite W-chromosome 585 chrUn_NT_477237v1 660 1815 (CAAGG)n 688 + 660 1815 0 2 266,105, 0,1050, +,+, 735703 Simple_repeat Simple_repeat 585 chrUn_NT_477237v1 1861 2591 (CAAGG)n 637 + 1861 2591 0 3 396,177,31, 0,396,699, +,+,+, 735708 Simple_repeat Simple_repeat 585 chrUn_NT_477240v1 293 2555 GGXHOI 365 - 293 2555 0 2 1179,1068, 0,1194, -,-, 735718 Satellite W-chromosome 585 chrUn_NT_477245v1 758 1046 (TATGGGGTTA)n 815 + 758 1046 0 3 63,63,62, 0,113,226, +,+,+, 735733 Simple_repeat Simple_repeat 585 chrUn_NT_477245v1 1726 1910 (TATGGGGTTA)n 834 + 1726 1910 0 2 72,62, 0,122, +,+, 735735 Simple_repeat Simple_repeat 585 chrUn_NT_477249v1 1048 1350 (CTCTATGGGG)n 326 - 1048 1350 0 2 125,128, 0,174, -,-, 735742 Satellite Satellite 585 chrUn_NT_477253v1 840 2501 GGXHOI 407 - 840 2501 0 4 264,393,300,625, 0,305,715,1036, -,-,-,-, 735750 Satellite W-chromosome 585 chrUn_NT_477259v1 1445 1529 (G)n 874 + 1445 1529 0 2 27,19, 0,65, +,+, 735770 Simple_repeat Simple_repeat 585 chrUn_NT_477262v1 1208 2575 GGXHOI 445 - 1208 2575 0 2 883,470, 0,897, -,-, 735782 Satellite W-chromosome 585 chrUn_NT_477269v1 202 414 A-rich 193 + 202 414 0 2 62,91, 0,121, +,+, 735795 Low_complexity Low_complexity 585 chrUn_NT_477270v1 1852 2569 GGXHOI 308 - 1852 2569 0 2 517,182, 0,535, -,-, 735805 Satellite W-chromosome 585 chrUn_NT_477271v1 647 2540 GGXHOI 399 - 647 2540 0 4 465,135,289,935, 0,484,632,958, -,-,-,-, 735808 Satellite W-chromosome 585 chrUn_NT_477272v1 1623 2557 GGXHOI 379 - 1623 2557 0 2 516,355, 0,579, -,-, 735811 Satellite W-chromosome 585 chrUn_NT_477273v1 1723 2485 GGXHOI 473 + 1723 2485 0 2 351,395, 0,367, +,+, 735814 Satellite W-chromosome 585 chrUn_NT_477275v1 1938 2526 GGXHOI 372 - 1938 2526 0 2 231,345, 0,243, -,-, 735816 Satellite W-chromosome 585 chrUn_NT_477277v1 84 1759 (CCCTAA)n 678 + 84 1759 0 5 370,259,570,181,174, 0,404,663,1286,1501, +,+,+,+,+, 735819 Simple_repeat Simple_repeat 585 chrUn_NT_477277v1 1862 2321 (CCCTAA)n 588 + 1862 2321 0 2 107,37, 0,422, +,+, 735821 Simple_repeat Simple_repeat 585 chrUn_NT_477279v1 1409 2468 GGXHOI 391 + 1409 2468 0 2 788,256, 0,803, +,+, 735830 Satellite W-chromosome 585 chrUn_NT_477283v1 2152 2383 (CTCTATGGGG)n 464 + 2152 2383 0 2 69,33, 0,198, +,+, 735838 Satellite Satellite 585 chrUn_NT_477293v1 813 1456 (CCCTAA)n 544 + 813 1456 0 2 120,351, 0,292, +,+, 735875 Simple_repeat Simple_repeat 585 chrUn_NT_477293v1 1566 2555 (CCCTAA)n 658 + 1566 2555 0 2 382,407, 0,582, +,+, 735879 Simple_repeat Simple_repeat 585 chrUn_NT_477296v1 626 1069 (CGAGG)n 559 + 626 1069 0 2 181,235, 0,208, +,+, 735887 Simple_repeat Simple_repeat 585 chrUn_NT_477296v1 1162 2133 (CGAGG)n 518 + 1162 2133 0 4 178,320,183,180, 0,225,582,791, +,+,+,+, 735889 Simple_repeat Simple_repeat 585 chrUn_NT_477298v1 742 1609 GGXHOI 372 - 742 1609 0 2 358,452, 0,415, -,-, 735897 Satellite W-chromosome 585 chrUn_NT_477300v1 1914 2552 GGXHOI 280 + 1914 2552 0 2 172,455, 0,183, +,+, 735902 Satellite W-chromosome 585 chrUn_NT_477303v1 1867 2549 GGXHOI 373 - 1867 2549 0 3 150,192,310, 0,168,372, -,-,-, 735915 Satellite W-chromosome 585 chrUn_NT_477306v1 788 1120 (CAGTG)n 352 + 788 1120 0 2 190,123, 0,209, +,+, 735921 Simple_repeat Simple_repeat 585 chrUn_NT_477310v1 1148 1821 (CCCCATTGGG)n 435 + 1148 1821 0 3 233,127,245, 0,263,428, +,+,+, 735935 Satellite Satellite 585 chrUn_NT_477312v1 330 649 (CGAGG)n 546 + 330 649 0 2 178,129, 0,190, +,+, 735939 Simple_repeat Simple_repeat 585 chrUn_NT_477315v1 220 2534 GGLTR10C-int 712 + 220 2534 0 2 361,1953, 0,361, +,+, 735951 LTR ERVK 585 chrUn_NT_477316v1 663 975 GGXHOI 377 + 663 975 0 2 135,116, 0,196, +,+, 735953 Satellite W-chromosome 585 chrUn_NT_477316v1 1045 1628 GGXHOI 402 + 1045 1628 0 2 312,256, 0,327, +,+, 735954 Satellite W-chromosome 585 chrUn_NT_477316v1 1707 2148 GGXHOI 343 + 1707 2148 0 2 154,262, 0,179, +,+, 735955 Satellite W-chromosome 585 chrUn_NT_477320v1 313 2538 GGLTR7-int 451 - 313 2538 0 3 170,900,971, 0,218,1254, -,-,-, 735966 LTR ERV1 585 chrUn_NT_477321v1 483 2538 GGLTR10D-int 909 - 483 2538 0 2 362,1690, 0,365, -,-, 735969 LTR ERVK 585 chrUn_NT_477325v1 971 1598 (CCCTAA)n 551 + 971 1598 0 2 197,392, 0,235, +,+, 735981 Simple_repeat Simple_repeat 585 chrUn_NT_477325v1 1690 2237 (CCCTAA)n 582 + 1690 2237 0 2 290,93, 0,454, +,+, 735983 Simple_repeat Simple_repeat 585 chrUn_NT_477328v1 571 1169 (CTCTATGGGG)n 595 - 571 1169 0 2 238,328, 0,270, -,-, 735993 Satellite Satellite 585 chrUn_NT_477328v1 1242 1663 (CTCTATGGGG)n 587 - 1242 1663 0 3 117,119,117, 0,172,304, -,-,-, 735995 Satellite Satellite 585 chrUn_NT_477329v1 420 1045 (GCATG)n 143 + 420 1045 0 2 449,157, 0,468, +,+, 736001 Simple_repeat Simple_repeat 585 chrUn_NT_477329v1 1692 2382 (GCATG)n 207 + 1692 2382 0 3 350,175,94, 0,402,596, +,+,+, 736002 Simple_repeat Simple_repeat 585 chrUn_NT_477331v1 1218 2189 GGXHOI 549 - 1218 2189 0 3 19,125,464, 0,334,507, -,-,-, 736015 Satellite W-chromosome 585 chrUn_NT_477332v1 583 1337 (CAATG)n 394 + 583 1337 0 3 245,121,203, 0,418,551, +,+,+, 736019 Simple_repeat Simple_repeat 585 chrUn_NT_477332v1 919 1432 (CACAG)n 348 + 919 1432 0 2 215,95, 0,418, +,+, 736021 Simple_repeat Simple_repeat 585 chrUn_NT_477332v1 1661 2100 (CAGTG)n 388 + 1661 2100 0 2 204,89, 0,350, +,+, 736024 Simple_repeat Simple_repeat 585 chrUn_NT_477338v1 1161 1483 GGXHOI 394 - 1161 1483 0 2 140,134, 0,188, -,-, 736039 Satellite W-chromosome 585 chrUn_NT_477338v1 1566 1884 GGXHOI 367 - 1566 1884 0 2 139,129, 0,189, -,-, 736040 Satellite W-chromosome 585 chrUn_NT_477338v1 2010 2505 GGXHOI 401 - 2010 2505 0 3 142,142,151, 0,154,344, -,-,-, 736041 Satellite W-chromosome 585 chrUn_NT_477343v1 786 1567 GGXHOI 560 + 786 1567 0 2 69,403, 0,378, +,+, 736050 Satellite W-chromosome 585 chrUn_NT_477350v1 50 874 (CCCTAA)n 584 + 50 874 0 2 364,439, 0,385, +,+, 736084 Simple_repeat Simple_repeat 585 chrUn_NT_477350v1 936 2073 (CCCTAA)n 607 + 936 2073 0 2 892,192, 0,945, +,+, 736086 Simple_repeat Simple_repeat 585 chrUn_NT_477354v1 2058 2476 (C)n 840 + 2058 2476 0 5 58,32,76,45,58, 0,118,200,293,360, +,+,+,+,+, 736102 Simple_repeat Simple_repeat 585 chrUn_NT_477357v1 381 2498 GGXHOI 289 - 381 2498 0 4 685,630,575,142, 0,723,1387,1975, -,-,-,-, 736107 Satellite W-chromosome 585 chrUn_NT_477362v1 1286 2052 (GCCCCACAGCT)n 516 - 1286 2052 0 3 343,179,114, 0,473,652, -,-,-, 736124 Satellite Satellite 585 chrUn_NT_477365v1 518 978 (CGAGG)n 484 + 518 978 0 2 201,79, 0,381, +,+, 736134 Simple_repeat Simple_repeat 585 chrUn_NT_477365v1 1194 1658 (CGAGG)n 501 + 1194 1658 0 2 174,264, 0,200, +,+, 736137 Simple_repeat Simple_repeat 585 chrUn_NT_477365v1 1797 2506 (CGAGG)n 585 + 1797 2506 0 3 92,56,320, 0,272,389, +,+,+, 736139 Simple_repeat Simple_repeat 585 chrUn_NT_477370v1 840 2451 GGXHOI 403 - 840 2451 0 2 928,667, 0,944, -,-, 736162 Satellite W-chromosome 585 chrUn_NT_477374v1 2130 2288 (CCACT)n 252 + 2130 2288 0 2 34,79, 0,79, +,+, 736174 Simple_repeat Simple_repeat 585 chrUn_NT_477376v1 1215 2500 GGLTR7A 821 - 1215 2500 0 2 609,676, 0,609, -,-, 736180 LTR ERV1 585 chrUn_NT_477380v1 1101 1670 (ACCCCATAGGG)n 462 - 1101 1670 0 3 121,53,253, 0,231,316, -,-,-, 736188 Satellite Satellite 585 chrUn_NT_477383v1 752 1784 GGXHOI 371 + 752 1784 0 4 214,133,400,169, 0,259,447,863, +,+,+,+, 736199 Satellite W-chromosome 585 chrUn_NT_477388v1 1042 2133 CR1-B2 676 - 1042 2133 0 2 869,219, 0,872, -,-, 736213 LINE CR1 585 chrUn_NT_477389v1 517 1000 (TTAGGG)n 650 + 517 1000 0 2 131,160, 0,323, +,+, 736216 Simple_repeat Simple_repeat 585 chrUn_NT_477389v1 1089 1542 (TTAGGG)n 498 + 1089 1542 0 2 203,219, 0,234, +,+, 736219 Simple_repeat Simple_repeat 585 chrUn_NT_477389v1 1601 2414 (TTAGGG)n 663 + 1601 2414 0 2 187,612, 0,201, +,+, 736221 Simple_repeat Simple_repeat 585 chrUn_NT_477399v1 779 1250 (CCTTG)n 521 + 779 1250 0 2 186,224, 0,247, +,+, 736257 Simple_repeat Simple_repeat 585 chrUn_NT_477406v1 222 2470 (ACCCATAGGG)n 582 + 222 2470 0 10 164,39,118,121,374,61,285,350,122,248, 0,287,365,498,619,1127,1188,1473,1836,2000, +,+,+,+,+,+,+,+,+,+, 736282 Satellite Satellite 585 chrUn_NT_477411v1 1571 2187 CR1-H 670 - 1571 2187 0 2 135,481, 0,135, -,-, 736292 LINE CR1 585 chrUn_NT_477413v1 318 933 CR1-H 357 + 318 933 0 2 199,380, 0,235, +,+, 736297 LINE CR1 585 chrUn_NT_477431v1 1551 2442 GGXHOI 389 - 1551 2442 0 2 252,576, 0,315, -,-, 736362 Satellite W-chromosome 585 chrUn_NT_477433v1 1173 1529 GGXHOI 356 + 1173 1529 0 2 180,133, 0,223, +,+, 736366 Satellite W-chromosome 585 chrUn_NT_477441v1 1494 2459 GGXHOI 321 - 1494 2459 0 3 176,599,134, 0,191,831, -,-,-, 736381 Satellite W-chromosome 585 chrUn_NT_477444v1 551 1006 (ACCCCATAGGG)n 501 - 551 1006 0 3 124,124,128, 0,159,327, -,-,-, 736392 Satellite Satellite 585 chrUn_NT_477445v1 1699 2289 (ACCCCATAGGG)n 555 - 1699 2289 0 4 113,132,162,141, 0,131,275,449, -,-,-,-, 736398 Satellite Satellite 585 chrUn_NT_477453v1 1192 2390 GGXHOI 382 - 1192 2390 0 3 221,220,684, 0,232,514, -,-,-, 736416 Satellite W-chromosome 585 chrUn_NT_477456v1 181 1754 GGXHOI 396 + 181 1754 0 4 313,287,675,222, 0,325,627,1351, +,+,+,+, 736420 Satellite W-chromosome 585 chrUn_NT_477460v1 438 700 (CCCCATTGGG)n 325 + 438 700 0 2 107,155, 0,107, +,+, 736431 Satellite Satellite 585 chrUn_NT_477460v1 888 1132 (CCCCATTGGG)n 279 + 888 1132 0 2 106,127, 0,117, +,+, 736432 Satellite Satellite 585 chrUn_NT_477460v1 2048 2443 (CCCCATTGGG)n 334 + 2048 2443 0 3 122,115,101, 0,151,294, +,+,+, 736435 Satellite Satellite 585 chrUn_NT_477463v1 1408 2128 GGXHOI 292 - 1408 2128 0 2 515,145, 0,575, -,-, 736439 Satellite W-chromosome 585 chrUn_NT_477466v1 1151 1607 (ACCCCATAGGG)n 330 - 1151 1607 0 3 122,110,110, 0,179,346, -,-,-, 736458 Satellite Satellite 585 chrUn_NT_477471v1 1972 2353 (CGAGG)n 477 + 1972 2353 0 2 180,182, 0,199, +,+, 736498 Simple_repeat Simple_repeat 585 chrUn_NT_477472v1 1546 2385 (CAAGG)n 567 + 1546 2385 0 3 172,241,426, 0,172,413, +,+,+, 736506 Simple_repeat Simple_repeat 585 chrUn_NT_477474v1 766 2296 GGLTR7-int 676 - 766 2296 0 3 787,227,421, 0,795,1109, -,-,-, 736512 LTR ERV1 585 chrUn_NT_477476v1 558 2436 (ACCCCATAGGG)n 566 - 558 2436 0 4 59,574,225,411, 0,253,1114,1467, -,-,-,-, 736518 Satellite Satellite 585 chrUn_NT_477478v1 273 333 (GGAGGAT)n 382 + 273 333 0 2 11,14, 0,46, +,+, 736525 Simple_repeat Simple_repeat 585 chrUn_NT_477485v1 771 1721 GGXHOI 424 + 771 1721 0 3 309,444,157, 0,326,793, +,+,+, 736544 Satellite W-chromosome 585 chrUn_NT_477500v1 785 2418 GGERVL-B-int 823 - 785 2418 0 2 910,723, 0,910, -,-, 736590 LTR ERVL 585 chrUn_NT_477502v1 213 2043 CR1-F 541 + 213 2043 0 6 199,204,154,199,193,201, 0,241,709,1151,1394,1629, +,+,+,+,+,+, 736595 LINE CR1 585 chrUn_NT_477502v1 2088 2412 CR1-F 618 + 2088 2412 0 2 209,70, 0,254, +,+, 736598 LINE CR1 585 chrUn_NT_477504v1 2272 2352 (C)n 816 + 2272 2352 0 2 20,25, 0,55, +,+, 736607 Simple_repeat Simple_repeat 585 chrUn_NT_477511v1 1737 2409 GGXHOI 342 - 1737 2409 0 2 433,181, 0,491, -,-, 736620 Satellite W-chromosome 585 chrUn_NT_477515v1 314 775 (CTCTATGGGG)n 525 - 314 775 0 3 194,83,19, 0,240,442, -,-,-, 736635 Satellite Satellite 585 chrUn_NT_477515v1 729 948 (ACCCATAGAG)n 422 + 729 948 0 2 58,19, 0,200, +,+, 736637 Satellite Satellite 585 chrUn_NT_477515v1 1424 1850 (ACCCCATAGGG)n 520 + 1424 1850 0 3 121,128,123, 0,152,303, +,+,+, 736641 Satellite Satellite 585 chrUn_NT_477515v1 1930 2406 (CTCTATGGGG)n 487 + 1930 2406 0 3 134,164,145, 0,143,331, +,+,+, 736642 Satellite Satellite 585 chrUn_NT_477517v1 256 1329 GGXHOI 353 - 256 1329 0 3 152,748,138, 0,169,935, -,-,-, 736648 Satellite W-chromosome 585 chrUn_NT_477517v1 1405 2364 GGXHOI 329 - 1405 2364 0 3 177,377,341, 0,194,618, -,-,-, 736649 Satellite W-chromosome 585 chrUn_NT_477519v1 1557 1998 CR1-F 603 - 1557 1998 0 2 191,203, 0,238, -,-, 736655 LINE CR1 585 chrUn_NT_477523v1 1777 1842 (C)n 817 + 1777 1842 0 2 25,22, 0,43, +,+, 736664 Simple_repeat Simple_repeat 585 chrUn_NT_477525v1 861 1134 (CCCCATTGGG)n 418 - 861 1134 0 2 134,125, 0,148, -,-, 736668 Satellite Satellite 585 chrUn_NT_477539v1 682 2381 GGXHOI 408 - 682 2381 0 2 694,954, 0,745, -,-, 736727 Satellite W-chromosome 585 chrUn_NT_477540v1 1962 2394 GGXHOI 361 + 1962 2394 0 2 306,114, 0,318, +,+, 736732 Satellite W-chromosome 585 chrUn_NT_477544v1 953 2165 GGXHOI 333 - 953 2165 0 2 962,233, 0,979, -,-, 736740 Satellite W-chromosome 585 chrUn_NT_477545v1 1173 1670 GGXHOI 351 - 1173 1670 0 2 228,254, 0,243, -,-, 736742 Satellite W-chromosome 585 chrUn_NT_477555v1 574 1713 GGXHOI 371 + 574 1713 0 3 408,534,171, 0,423,968, +,+,+, 736772 Satellite W-chromosome 585 chrUn_NT_477557v1 820 2380 GGXHOI 365 + 820 2380 0 3 665,307,511, 0,682,1049, +,+,+, 736776 Satellite W-chromosome 585 chrUn_NT_477564v1 403 673 (CCCCATTGGG)n 354 - 403 673 0 2 118,109, 0,161, -,-, 736801 Satellite Satellite 585 chrUn_NT_477564v1 2005 2241 (CCCCATTGGG)n 398 - 2005 2241 0 2 107,114, 0,122, -,-, 736805 Satellite Satellite 585 chrUn_NT_477567v1 1718 1975 (ACCCATAGAG)n 569 + 1718 1975 0 2 108,107, 0,150, +,+, 736822 Satellite Satellite 585 chrUn_NT_477568v1 70 2368 (TTAGGG)n 597 + 70 2368 0 9 640,37,174,190,174,179,171,160,17, 0,831,897,1115,1336,1541,1738,1930,2281, +,+,+,+,+,+,+,+,+, 736826 Simple_repeat Simple_repeat 585 chrUn_NT_477570v1 330 2370 GGXHOI 378 + 330 2370 0 4 868,95,172,833, 0,910,1020,1207, +,+,+,+, 736831 Satellite W-chromosome 585 chrUn_NT_477571v1 1011 2337 GGLTR7-int 593 + 1011 2337 0 2 716,504, 0,822, +,+, 736833 LTR ERV1 585 chrUn_NT_477581v1 444 1681 GGXHOI 390 + 444 1681 0 5 159,575,84,132,212, 0,173,771,876,1025, +,+,+,+,+, 736854 Satellite W-chromosome 585 chrUn_NT_477584v1 655 711 (TCCCCCA)n 350 + 655 711 0 2 15,9, 0,47, +,+, 736867 Simple_repeat Simple_repeat 585 chrUn_NT_477587v1 342 2362 ENS3-int 891 + 342 2362 0 2 923,1097, 0,923, +,+, 736875 LTR ERVL 585 chrUn_NT_477590v1 1030 2369 (CGGAG)n 269 + 1030 2369 0 4 205,178,465,429, 0,236,414,910, +,+,+,+, 736883 Simple_repeat Simple_repeat 585 chrUn_NT_477593v1 508 1117 (ACCCATAGAG)n 675 . 508 1117 0 2 307,302, 0,307, -,+, 736892 Satellite Satellite 585 chrUn_NT_477593v1 1126 1760 (ACCCATAGAG)n 639 - 1126 1760 0 4 146,113,161,163, 0,161,276,471, -,-,-,-, 736895 Satellite Satellite 585 chrUn_NT_477593v1 1721 2341 (ACCCATAGGG)n 601 - 1721 2341 0 2 476,123, 0,497, -,-, 736896 Satellite Satellite 585 chrUn_NT_477598v1 1194 2352 GGXHOI 375 - 1194 2352 0 3 196,771,94, 0,255,1064, -,-,-, 736903 Satellite W-chromosome 585 chrUn_NT_477600v1 976 1082 G-rich 623 + 976 1082 0 2 30,46, 0,60, +,+, 736918 Low_complexity Low_complexity 585 chrUn_NT_477601v1 1616 2347 GGXHOI 354 - 1616 2347 0 2 379,334, 0,397, -,-, 736923 Satellite W-chromosome 585 chrUn_NT_477602v1 1213 2066 (CTCTATGGGG)n 531 - 1213 2066 0 4 116,245,128,275, 0,151,408,578, -,-,-,-, 736929 Satellite Satellite 585 chrUn_NT_477604v1 1862 2339 GGXHOI 351 + 1862 2339 0 2 187,273, 0,204, +,+, 736934 Satellite W-chromosome 585 chrUn_NT_477606v1 574 2014 GGXHOI 435 - 574 2014 0 3 696,459,220, 0,712,1220, -,-,-, 736936 Satellite W-chromosome 585 chrUn_NT_477623v1 786 2344 GGXHOI 389 - 786 2344 0 6 399,309,166,146,176,173, 0,435,801,978,1187,1385, -,-,-,-,-,-, 737005 Satellite W-chromosome 585 chrUn_NT_477625v1 353 717 (ACCCCATAGGG)n 227 - 353 717 0 2 173,146, 0,218, -,-, 737008 Satellite Satellite 585 chrUn_NT_477628v1 1345 2332 GGXHOI 394 + 1345 2332 0 2 92,881, 0,106, +,+, 737025 Satellite W-chromosome 585 chrUn_NT_477631v1 374 673 (ACCCCATAGGG)n 258 - 374 673 0 2 125,138, 0,161, -,-, 737032 Satellite Satellite 585 chrUn_NT_477632v1 813 1807 CR1-B2 702 - 813 1807 0 2 769,222, 0,772, -,-, 737039 LINE CR1 585 chrUn_NT_477637v1 39 2199 (TTAGGG)n 634 + 39 2199 0 6 183,452,439,61,386,12, 0,212,664,1289,1403,2148, +,+,+,+,+,+, 737043 Simple_repeat Simple_repeat 585 chrUn_NT_477638v1 512 2326 (CCTTG)n 570 + 512 2326 0 6 189,142,188,350,110,283, 0,374,690,896,1246,1531, +,+,+,+,+,+, 737052 Simple_repeat Simple_repeat 585 chrUn_NT_477642v1 174 900 (ACCCCATAGGG)n 578 - 174 900 0 2 185,428, 0,298, -,-, 737062 Satellite Satellite 585 chrUn_NT_477642v1 1279 1726 (ACCCATAGGG)n 716 - 1279 1726 0 2 217,219, 0,228, -,-, 737067 Satellite Satellite 585 chrUn_NT_477642v1 1769 2271 (ACCCATAGGG)n 664 - 1769 2271 0 2 236,25, 0,477, -,-, 737069 Satellite Satellite 585 chrUn_NT_477644v1 3 2316 GGXHOI 546 + 3 2316 0 4 439,223,370,103, 0,885,1404,2210, +,+,+,+, 737076 Satellite W-chromosome 585 chrUn_NT_477646v1 1127 2034 GGXHOI 313 + 1127 2034 0 3 171,351,313, 0,226,594, +,+,+, 737084 Satellite W-chromosome 585 chrUn_NT_477650v1 1349 1699 (CTCTATGGGG)n 718 - 1349 1699 0 2 70,161, 0,189, -,-, 737101 Satellite Satellite 585 chrUn_NT_477652v1 1502 2309 GGXHOI 422 + 1502 2309 0 3 507,187,76, 0,526,731, +,+,+, 737108 Satellite W-chromosome 585 chrUn_NT_477662v1 988 2189 GGXHOI 326 + 988 2189 0 3 210,603,357, 0,222,844, +,+,+, 737129 Satellite W-chromosome 585 chrUn_NT_477664v1 731 1107 (CTCTATGGGG)n 568 - 731 1107 0 2 124,134, 0,242, -,-, 737137 Satellite Satellite 585 chrUn_NT_477664v1 1526 1787 (GCCCCACAGCT)n 599 - 1526 1787 0 2 123,127, 0,134, -,-, 737141 Satellite Satellite 585 chrUn_NT_477665v1 552 1245 GGXHOI 320 + 552 1245 0 2 260,415, 0,278, +,+, 737143 Satellite W-chromosome 585 chrUn_NT_477665v1 1430 2304 GGXHOI 333 + 1430 2304 0 2 625,218, 0,656, +,+, 737144 Satellite W-chromosome 585 chrUn_NT_477676v1 196 684 (CGAGG)n 574 + 196 684 0 2 179,279, 0,209, +,+, 737165 Simple_repeat Simple_repeat 585 chrUn_NT_477679v1 278 2288 GGXHOI 406 - 278 2288 0 4 702,101,639,457, 0,744,890,1553, -,-,-,-, 737176 Satellite W-chromosome 585 chrUn_NT_477681v1 458 1021 GGXHOI 395 - 458 1021 0 2 132,373, 0,190, -,-, 737180 Satellite W-chromosome 585 chrUn_NT_477681v1 1102 1548 GGXHOI 367 - 1102 1548 0 2 299,132, 0,314, -,-, 737181 Satellite W-chromosome 585 chrUn_NT_477683v1 1439 2283 GGXHOI 331 + 1439 2283 0 3 131,576,106, 0,146,738, +,+,+, 737186 Satellite W-chromosome 585 chrUn_NT_477684v1 727 1531 GGXHOI 345 + 727 1531 0 2 514,270, 0,534, +,+, 737188 Satellite W-chromosome 585 chrUn_NT_477684v1 1615 2275 GGXHOI 384 + 1615 2275 0 2 312,326, 0,334, +,+, 737189 Satellite W-chromosome 585 chrUn_NT_477703v1 433 2269 GGXHOI 377 + 433 2269 0 2 1273,543, 0,1293, +,+, 737231 Satellite W-chromosome 585 chrUn_NT_477705v1 848 1862 (CATTG)n 310 + 848 1862 0 4 205,194,169,232, 0,217,586,782, +,+,+,+, 737239 Simple_repeat Simple_repeat 585 chrUn_NT_477707v1 664 1026 (ACCCCATAGGG)n 313 - 664 1026 0 2 55,241, 0,121, -,-, 737246 Satellite Satellite 585 chrUn_NT_477707v1 1178 1556 (ACCCCATAGGG)n 492 - 1178 1556 0 2 86,95, 0,283, -,-, 737249 Satellite Satellite 585 chrUn_NT_477707v1 1675 2008 (ACCCCATAGGG)n 490 - 1675 2008 0 2 122,174, 0,159, -,-, 737253 Satellite Satellite 585 chrUn_NT_477708v1 625 2050 (CGAGG)n 535 + 625 2050 0 4 96,76,854,171, 0,273,370,1254, +,+,+,+, 737259 Simple_repeat Simple_repeat 585 chrUn_NT_477712v1 1167 2218 CR1-F 675 + 1167 2218 0 4 176,187,202,97, 0,221,450,954, +,+,+,+, 737282 LINE CR1 585 chrUn_NT_477714v1 1735 2107 (ACCCCATAGGG)n 524 - 1735 2107 0 2 195,134, 0,238, -,-, 737297 Satellite Satellite 585 chrUn_NT_477717v1 733 1381 GGXHOI 474 + 733 1381 0 3 152,127,271, 0,209,377, +,+,+, 737301 Satellite W-chromosome 585 chrUn_NT_477718v1 1516 2251 GGXHOI 372 + 1516 2251 0 2 471,201, 0,534, +,+, 737306 Satellite W-chromosome 585 chrUn_NT_477723v1 247 2258 GGXHOI 340 - 247 2258 0 3 89,1232,625, 0,102,1386, -,-,-, 737310 Satellite W-chromosome 585 chrUn_NT_477728v1 645 1176 GGXHOI 315 + 645 1176 0 2 138,337, 0,194, +,+, 737318 Satellite W-chromosome 585 chrUn_NT_477744v1 1748 2237 (ACCCATTGGG)n 552 + 1748 2237 0 2 344,127, 0,362, +,+, 737367 Satellite Satellite 585 chrUn_NT_477746v1 501 1205 (TTAGGG)n 502 + 501 1205 0 2 179,222, 0,482, +,+, 737372 Simple_repeat Simple_repeat 585 chrUn_NT_477746v1 1286 1937 (TTAGGG)n 554 + 1286 1937 0 3 199,187,241, 0,211,410, +,+,+, 737376 Simple_repeat Simple_repeat 585 chrUn_NT_477752v1 604 2190 GGXHOI 383 - 604 2190 0 3 140,142,1277, 0,152,309, -,-,-, 737397 Satellite W-chromosome 585 chrUn_NT_477759v1 287 1398 GGXHOI 538 + 287 1398 0 2 801,29, 0,1082, +,+, 737408 Satellite W-chromosome 585 chrUn_NT_477759v1 1467 2224 GGXHOI 466 + 1467 2224 0 2 414,313, 0,444, +,+, 737410 Satellite W-chromosome 585 chrUn_NT_477765v1 176 810 (CAAGG)n 660 + 176 810 0 2 178,436, 0,198, +,+, 737414 Simple_repeat Simple_repeat 585 chrUn_NT_477765v1 751 1100 (CAGGC)n 568 + 751 1100 0 2 134,35, 0,314, +,+, 737415 Simple_repeat Simple_repeat 585 chrUn_NT_477765v1 1563 2131 (CAAGG)n 596 + 1563 2131 0 2 370,198, 0,370, +,+, 737420 Simple_repeat Simple_repeat 585 chrUn_NT_477771v1 1188 2140 GGXHOI 350 - 1188 2140 0 2 419,517, 0,435, -,-, 737438 Satellite W-chromosome 585 chrUn_NT_477775v1 525 1015 (ACCCCATAGGG)n 603 + 525 1015 0 2 168,322, 0,168, +,+, 737459 Satellite Satellite 585 chrUn_NT_477775v1 859 1207 (ACCCATAGAG)n 590 + 859 1207 0 2 147,30, 0,318, +,+, 737460 Satellite Satellite 585 chrUn_NT_477775v1 1103 1539 (ACCCCATAGGG)n 510 + 1103 1539 0 2 64,257, 0,179, +,+, 737462 Satellite Satellite 585 chrUn_NT_477784v1 1215 2212 GGXHOI 427 - 1215 2212 0 4 163,140,51,564, 0,181,340,433, -,-,-,-, 737487 Satellite W-chromosome 585 chrUn_NT_477785v1 467 882 (CAAGG)n 512 + 467 882 0 2 216,183, 0,232, +,+, 737490 Simple_repeat Simple_repeat 585 chrUn_NT_477785v1 1548 2155 (CAAGG)n 476 + 1548 2155 0 2 115,298, 0,309, +,+, 737493 Simple_repeat Simple_repeat 585 chrUn_NT_477786v1 568 877 (ACCCATAGGG)n 473 - 568 877 0 2 57,230, 0,79, -,-, 737501 Satellite Satellite 585 chrUn_NT_477786v1 930 1097 (ACCCATAGGG)n 299 - 930 1097 0 2 19,126, 0,41, -,-, 737503 Satellite Satellite 585 chrUn_NT_477790v1 1011 1737 (TTAGGG)n 646 + 1011 1737 0 2 139,297, 0,429, +,+, 737518 Simple_repeat Simple_repeat 585 chrUn_NT_477790v1 1808 2199 (TTAGGG)n 742 + 1808 2199 0 2 188,203, 0,188, +,+, 737521 Simple_repeat Simple_repeat 585 chrUn_NT_477791v1 1101 2209 GGXHOI 502 - 1101 2209 0 3 166,493,230, 0,365,878, -,-,-, 737525 Satellite W-chromosome 585 chrUn_NT_477794v1 747 1506 GGXHOI 364 + 747 1506 0 2 545,165, 0,594, +,+, 737533 Satellite W-chromosome 585 chrUn_NT_477794v1 1804 2206 GGXHOI 389 + 1804 2206 0 2 245,144, 0,258, +,+, 737534 Satellite W-chromosome 585 chrUn_NT_477795v1 224 2207 CR1-F 537 + 224 2207 0 6 203,205,155,201,180,114, 0,245,717,1164,1645,1869, +,+,+,+,+,+, 737536 LINE CR1 585 chrUn_NT_477796v1 1232 2196 GGXHOI 384 + 1232 2196 0 2 247,686, 0,278, +,+, 737541 Satellite W-chromosome 585 chrUn_NT_477798v1 179 598 (CAGGC)n 500 + 179 598 0 2 155,88, 0,331, +,+, 737544 Simple_repeat Simple_repeat 585 chrUn_NT_477798v1 950 1518 (CAAGG)n 698 + 950 1518 0 2 257,129, 0,439, +,+, 737548 Simple_repeat Simple_repeat 585 chrUn_NT_477798v1 1207 1613 (CAGGC)n 556 + 1207 1613 0 2 182,224, 0,182, +,+, 737549 Simple_repeat Simple_repeat 585 chrUn_NT_477798v1 1592 2200 (CAAGG)n 708 + 1592 2200 0 3 97,30,126, 0,276,482, +,+,+, 737550 Simple_repeat Simple_repeat 585 chrUn_NT_477808v1 53 617 (TTAGGG)n 686 + 53 617 0 2 350,214, 0,350, +,+, 737578 Simple_repeat Simple_repeat 585 chrUn_NT_477808v1 1179 2174 (TTAGGG)n 603 + 1179 2174 0 3 179,399,344, 0,214,651, +,+,+, 737582 Simple_repeat Simple_repeat 585 chrUn_NT_477810v1 472 557 (G)n 880 + 472 557 0 2 20,27, 0,58, +,+, 737589 Simple_repeat Simple_repeat 585 chrUn_NT_477811v1 1251 1947 GGXHOI 297 + 1251 1947 0 3 157,334,139, 0,179,557, +,+,+, 737591 Satellite W-chromosome 585 chrUn_NT_477812v1 647 1890 (TTAGGG)n 579 + 647 1890 0 4 286,156,407,184, 0,301,635,1059, +,+,+,+, 737597 Simple_repeat Simple_repeat 585 chrUn_NT_477816v1 1233 1795 (CGAGG)n 425 + 1233 1795 0 3 157,183,183, 0,174,379, +,+,+, 737611 Simple_repeat Simple_repeat 585 chrUn_NT_477832v1 1204 1501 GGXHOI 301 + 1204 1501 0 2 132,112, 0,185, +,+, 737663 Satellite W-chromosome 585 chrUn_NT_477840v1 673 949 (ACCCCATAGGG)n 371 + 673 949 0 2 116,116, 0,160, +,+, 737679 Satellite Satellite 585 chrUn_NT_477854v1 1540 2168 GGXHOI 356 + 1540 2168 0 3 196,129,265, 0,218,363, +,+,+, 737711 Satellite W-chromosome 585 chrUn_NT_477868v1 530 2161 GGXHOI 365 + 530 2161 0 2 618,954, 0,677, +,+, 737735 Satellite W-chromosome 585 chrUn_NT_477871v1 742 1264 (TACTG)n 264 + 742 1264 0 2 283,184, 0,338, +,+, 737744 Simple_repeat Simple_repeat 585 chrUn_NT_477883v1 1639 2146 GGLTR5B 328 + 1639 2146 0 2 317,134, 0,373, +,+, 737764 LTR ERVL 585 chrUn_NT_477885v1 1123 2064 GGXHOI 358 + 1123 2064 0 2 290,634, 0,307, +,+, 737767 Satellite W-chromosome 585 chrUn_NT_477893v1 1722 2125 GGXHOI 429 - 1722 2125 0 2 186,204, 0,199, -,-, 737782 Satellite W-chromosome 585 chrUn_NT_477899v1 364 442 (GGAGT)n 532 + 364 442 0 2 21,6, 0,72, +,+, 737796 Simple_repeat Simple_repeat 585 chrUn_NT_477901v1 565 2072 (ACCCATAGGG)n 633 + 565 2072 0 3 715,39,228, 0,1218,1279, +,+,+, 737811 Satellite Satellite 585 chrUn_NT_477901v1 1280 1536 (ACCCCATAGGG)n 512 + 1280 1536 0 2 106,145, 0,111, +,+, 737812 Satellite Satellite 585 chrUn_NT_477904v1 1167 2079 GGXHOI 536 - 1167 2079 0 2 392,288, 0,624, -,-, 737829 Satellite W-chromosome 585 chrUn_NT_477906v1 1041 2132 GGXHOI 376 - 1041 2132 0 2 958,117, 0,974, -,-, 737836 Satellite W-chromosome 585 chrUn_NT_477907v1 565 1943 GGXHOI 356 + 565 1943 0 3 507,514,295, 0,541,1083, +,+,+, 737838 Satellite W-chromosome 585 chrUn_NT_477909v1 305 2135 GGXHOI 538 - 305 2135 0 4 25,148,247,372, 0,334,886,1458, -,-,-,-, 737842 Satellite W-chromosome 585 chrUn_NT_477912v1 519 2134 GGXHOI 395 - 519 2134 0 4 137,348,442,544, 0,188,586,1071, -,-,-,-, 737848 Satellite W-chromosome 585 chrUn_NT_477914v1 676 2132 GGXHOI 381 - 676 2132 0 3 598,495,288, 0,651,1168, -,-,-, 737853 Satellite W-chromosome 585 chrUn_NT_477919v1 1241 2112 GGXHOI 572 + 1241 2112 0 2 273,550, 0,321, +,+, 737860 Satellite W-chromosome 585 chrUn_NT_477922v1 1472 1871 (CCTTG)n 537 + 1472 1871 0 2 184,215, 0,184, +,+, 737874 Simple_repeat Simple_repeat 585 chrUn_NT_477926v1 315 2103 GGXHOI 347 - 315 2103 0 2 668,1075, 0,713, -,-, 737883 Satellite W-chromosome 585 chrUn_NT_477940v1 364 2113 GGXHOI 359 - 364 2113 0 3 267,134,1272, 0,291,477, -,-,-, 737924 Satellite W-chromosome 585 chrUn_NT_477941v1 1339 2109 GGXHOI 343 + 1339 2109 0 3 223,169,328, 0,254,442, +,+,+, 737926 Satellite W-chromosome 585 chrUn_NT_477953v1 336 738 (CTCTATGGGG)n 674 + 336 738 0 2 114,269, 0,133, +,+, 737947 Satellite Satellite 585 chrUn_NT_477953v1 1123 1372 (ACCCATAGAG)n 546 - 1123 1372 0 2 102,30, 0,219, -,-, 737950 Satellite Satellite 585 chrUn_NT_477956v1 215 1519 GGXHOI 350 - 215 1519 0 3 712,133,429, 0,727,875, -,-,-, 737961 Satellite W-chromosome 585 chrUn_NT_477967v1 1277 2074 GGXHOI 331 - 1277 2074 0 2 438,347, 0,450, -,-, 737992 Satellite W-chromosome 585 chrUn_NT_477968v1 1559 2103 (CAAGG)n 634 + 1559 2103 0 2 164,87, 0,457, +,+, 737998 Simple_repeat Simple_repeat 585 chrUn_NT_477976v1 696 1805 (CCTCG)n 467 + 696 1805 0 2 176,917, 0,192, +,+, 738022 Simple_repeat Simple_repeat 585 chrUn_NT_477979v1 1142 1410 (CAAGG)n 647 + 1142 1410 0 2 46,222, 0,46, +,+, 738033 Simple_repeat Simple_repeat 585 chrUn_NT_477997v1 270 2065 GGXHOI 291 - 270 2065 0 3 152,293,1281, 0,165,514, -,-,-, 738073 Satellite W-chromosome 585 chrUn_NT_477999v1 972 1587 (CCTTG)n 604 + 972 1587 0 3 206,159,70, 0,207,545, +,+,+, 738081 Simple_repeat Simple_repeat 585 chrUn_NT_477999v1 1671 2058 (CCTTG)n 544 + 1671 2058 0 2 189,198, 0,189, +,+, 738084 Simple_repeat Simple_repeat 585 chrUn_NT_478007v1 1356 2066 GGXHOI 488 - 1356 2066 0 2 449,243, 0,467, -,-, 738105 Satellite W-chromosome 585 chrUn_NT_478011v1 468 2057 GGXHOI 467 - 468 2057 0 2 148,1387, 0,202, -,-, 738109 Satellite W-chromosome 585 chrUn_NT_478015v1 606 2056 GGXHOI 503 + 606 2056 0 3 806,12,306, 0,829,1144, +,+,+, 738115 Satellite W-chromosome 585 chrUn_NT_478019v1 660 1812 GGXHOI 516 + 660 1812 0 2 287,337, 0,815, +,+, 738126 Satellite W-chromosome 585 chrUn_NT_478031v1 134 605 (CTCTATGGGG)n 694 + 134 605 0 2 170,185, 0,286, +,+, 738162 Satellite Satellite 585 chrUn_NT_478031v1 723 1002 (CTCTATGGGG)n 720 - 723 1002 0 2 125,38, 0,241, -,-, 738165 Satellite Satellite 585 chrUn_NT_478031v1 1128 1498 (CTCTATGGGG)n 716 - 1128 1498 0 2 231,17, 0,353, -,-, 738168 Satellite Satellite 585 chrUn_NT_478031v1 1724 2054 (CTCTATGGGG)n 702 - 1724 2054 0 2 90,27, 0,303, -,-, 738171 Satellite Satellite 585 chrUn_NT_478039v1 286 2042 (CCTTG)n 621 + 286 2042 0 6 367,410,183,196,192,213, 0,385,795,978,1174,1543, +,+,+,+,+,+, 738182 Simple_repeat Simple_repeat 585 chrUn_NT_478045v1 730 2030 GGXHOI 414 + 730 2030 0 3 681,151,407, 0,692,893, +,+,+, 738188 Satellite W-chromosome 585 chrUn_NT_478058v1 434 1155 GGXHOI 405 - 434 1155 0 2 182,501, 0,220, -,-, 738224 Satellite W-chromosome 585 chrUn_NT_478058v1 1240 2025 GGXHOI 357 - 1240 2025 0 2 315,415, 0,370, -,-, 738225 Satellite W-chromosome 585 chrUn_NT_478076v1 166 722 (CATCC)n 555 + 166 722 0 2 358,198, 0,358, +,+, 738275 Simple_repeat Simple_repeat 585 chrUn_NT_478076v1 1647 2025 (ACCCATAGGG)n 551 + 1647 2025 0 2 112,258, 0,120, +,+, 738279 Satellite Satellite 585 chrUn_NT_478077v1 1715 1800 (CTCCA)n 384 + 1715 1800 0 2 10,28, 0,57, +,+, 738286 Simple_repeat Simple_repeat 585 chrUn_NT_478080v1 284 1693 GGXHOI 558 - 284 1693 0 2 354,536, 0,873, -,-, 738295 Satellite W-chromosome 585 chrUn_NT_478085v1 1106 2016 GGXHOI 574 + 1106 2016 0 2 451,68, 0,842, +,+, 738309 Satellite W-chromosome 585 chrUn_NT_478086v1 672 2013 GGERVL-C-int 821 - 672 2013 0 2 516,825, 0,516, -,-, 738312 LTR ERVL 585 chrUn_NT_478088v1 338 2012 GGXHOI 385 - 338 2012 0 3 681,816,147, 0,696,1527, -,-,-, 738318 Satellite W-chromosome 585 chrUn_NT_478109v1 572 1990 GGXHOI 403 - 572 1990 0 2 440,963, 0,455, -,-, 738349 Satellite W-chromosome 585 chrUn_NT_478112v1 831 1931 GGXHOI 356 - 831 1931 0 5 135,220,253,181,237, 0,156,392,663,863, -,-,-,-,-, 738352 Satellite W-chromosome 585 chrUn_NT_478115v1 560 1773 GGXHOI 520 - 560 1773 0 2 772,180, 0,1033, -,-, 738358 Satellite W-chromosome 585 chrUn_NT_478120v1 873 1187 (ACCCATAGGG)n 349 - 873 1187 0 2 140,128, 0,186, -,-, 738374 Satellite Satellite 585 chrUn_NT_478120v1 1276 1616 (ACCCATAGGG)n 344 - 1276 1616 0 2 192,122, 0,218, -,-, 738375 Satellite Satellite 585 chrUn_NT_478125v1 516 1971 GGXHOI 408 - 516 1971 0 2 225,1218, 0,237, -,-, 738386 Satellite W-chromosome 585 chrUn_NT_478127v1 1025 1640 CR1-H 388 + 1025 1640 0 2 208,371, 0,244, +,+, 738389 LINE CR1 585 chrUn_NT_478129v1 492 1982 GGXHOI 400 - 492 1982 0 2 540,932, 0,558, -,-, 738398 Satellite W-chromosome 585 chrUn_NT_478130v1 508 1975 GGXHOI 399 + 508 1975 0 3 571,141,690, 0,589,777, +,+,+, 738400 Satellite W-chromosome 585 chrUn_NT_478133v1 527 1957 GGXHOI 404 - 527 1957 0 3 258,924,221, 0,272,1209, -,-,-, 738404 Satellite W-chromosome 585 chrUn_NT_478134v1 1159 1263 CR1-C4 615 - 1159 1263 0 2 55,49, 0,55, -,-, 738407 LINE CR1 585 chrUn_NT_478134v1 1214 1352 CR1-B2 426 - 1214 1352 0 2 18,47, 0,91, -,-, 738408 LINE CR1 585 chrUn_NT_478134v1 1348 1450 CR1-C4 568 - 1348 1450 0 2 54,48, 0,54, -,-, 738409 LINE CR1 585 chrUn_NT_478134v1 1591 1938 CR1-H2 552 - 1591 1938 0 2 12,52, 0,295, -,-, 738412 LINE CR1 585 chrUn_NT_478140v1 1241 1432 A-rich 333 + 1241 1432 0 2 37,98, 0,93, +,+, 738429 Low_complexity Low_complexity 585 chrUn_NT_478144v1 923 1259 CR1-H 611 - 923 1259 0 2 77,50, 0,286, -,-, 738446 LINE CR1 585 chrUn_NT_478146v1 736 1784 GGXHOI 546 + 736 1784 0 4 207,182,95,26, 0,433,648,1022, +,+,+,+, 738451 Satellite W-chromosome 585 chrUn_NT_478149v1 1092 1364 (ACCCCATAGGG)n 386 - 1092 1364 0 2 117,119, 0,153, -,-, 738459 Satellite Satellite 585 chrUn_NT_478149v1 1599 1844 (ACCCCATAGGG)n 292 - 1599 1844 0 2 120,114, 0,131, -,-, 738460 Satellite Satellite 585 chrUn_NT_478158v1 1501 1948 GGXHOI 333 - 1501 1948 0 2 139,288, 0,159, -,-, 738493 Satellite W-chromosome 585 chrUn_NT_478162v1 1088 1550 (ACCCATAGAG)n 622 + 1088 1550 0 2 181,28, 0,434, +,+, 738507 Satellite Satellite 585 chrUn_NT_478167v1 1483 1955 (TCCTC)n 298 + 1483 1955 0 2 139,284, 0,188, +,+, 738533 Simple_repeat Simple_repeat 585 chrUn_NT_478168v1 494 1059 (ACCCCATAGGG)n 480 - 494 1059 0 3 98,76,101, 0,217,464, -,-,-, 738539 Satellite Satellite 585 chrUn_NT_478168v1 965 1239 (CTCTATGGGG)n 634 - 965 1239 0 2 105,52, 0,222, -,-, 738542 Satellite Satellite 585 chrUn_NT_478169v1 1053 1265 (CAGTG)n 298 + 1053 1265 0 2 24,11, 0,201, +,+, 738555 Simple_repeat Simple_repeat 585 chrUn_NT_478175v1 265 1956 GGXHOI 385 + 265 1956 0 5 228,112,322,402,513, 0,256,384,756,1178, +,+,+,+,+, 738569 Satellite W-chromosome 585 chrUn_NT_478177v1 177 1634 GGXHOI 538 - 177 1634 0 2 1025,178, 0,1279, -,-, 738573 Satellite W-chromosome 585 chrUn_NT_478187v1 1078 1889 (CCCTGA)n 258 + 1078 1889 0 2 572,193, 0,618, +,+, 738599 Simple_repeat Simple_repeat 585 chrUn_NT_478196v1 1566 1713 (TCCTC)n 626 + 1566 1713 0 2 41,17, 0,130, +,+, 738620 Simple_repeat Simple_repeat 585 chrUn_NT_478197v1 215 676 (ACCCATAGGG)n 564 - 215 676 0 2 125,49, 0,412, -,-, 738624 Satellite Satellite 585 chrUn_NT_478197v1 1071 1571 (ACCCCATAGGG)n 613 + 1071 1571 0 2 190,227, 0,273, +,+, 738628 Satellite Satellite 585 chrUn_NT_478205v1 659 1880 GGXHOI 323 - 659 1880 0 2 690,515, 0,706, -,-, 738648 Satellite W-chromosome 585 chrUn_NT_478207v1 1223 1930 (CAGTG)n 439 + 1223 1930 0 3 135,29,245, 0,402,462, +,+,+, 738653 Simple_repeat Simple_repeat 585 chrUn_NT_478208v1 1182 1534 (CTAGG)n 398 + 1182 1534 0 2 113,48, 0,304, +,+, 738660 Simple_repeat Simple_repeat 585 chrUn_NT_478214v1 769 1918 GGXHOI 536 + 769 1918 0 2 454,336, 0,813, +,+, 738670 Satellite W-chromosome 585 chrUn_NT_478221v1 602 1212 (CCCCATTGGG)n 465 + 602 1212 0 2 446,164, 0,446, +,+, 738680 Satellite Satellite 585 chrUn_NT_478223v1 1127 1490 (CAAGG)n 594 + 1127 1490 0 2 122,54, 0,309, +,+, 738689 Simple_repeat Simple_repeat 585 chrUn_NT_478223v1 1571 1920 (CAAGG)n 648 + 1571 1920 0 2 182,167, 0,182, +,+, 738692 Simple_repeat Simple_repeat 585 chrUn_NT_478230v1 907 1138 (GCCCCACAGCT)n 660 - 907 1138 0 2 78,115, 0,116, -,-, 738714 Satellite Satellite 585 chrUn_NT_478234v1 851 1689 (CGAGG)n 486 + 851 1689 0 2 114,546, 0,292, +,+, 738721 Simple_repeat Simple_repeat 585 chrUn_NT_478241v1 956 1662 (ACCCCATAGGG)n 639 + 956 1662 0 3 232,261,33, 0,290,673, +,+,+, 738741 Satellite Satellite 585 chrUn_NT_478242v1 670 1913 GGXHOI 368 - 670 1913 0 2 626,567, 0,676, -,-, 738746 Satellite W-chromosome 585 chrUn_NT_478244v1 337 1907 GGXHOI 379 + 337 1907 0 2 463,1089, 0,481, +,+, 738752 Satellite W-chromosome 585 chrUn_NT_478245v1 432 1907 GGXHOI 391 - 432 1907 0 2 1087,373, 0,1102, -,-, 738754 Satellite W-chromosome 585 chrUn_NT_478246v1 692 987 (ACCCCATAGGG)n 325 - 692 987 0 2 139,128, 0,167, -,-, 738759 Satellite Satellite 585 chrUn_NT_478255v1 292 1191 (CCCCATTGGG)n 428 + 292 1191 0 4 294,196,113,136, 0,413,630,763, +,+,+,+, 738774 Satellite Satellite 585 chrUn_NT_478269v1 552 1409 GGLTR7A 769 - 552 1409 0 4 350,258,185,42, 0,350,630,815, -,-,-,-, 738809 LTR ERV1 585 chrUn_NT_478273v1 1236 1885 GGXHOI 397 + 1236 1885 0 2 455,178, 0,471, +,+, 738812 Satellite W-chromosome 585 chrUn_NT_478278v1 353 1254 GGXHOI 515 + 353 1254 0 3 322,333,20, 0,361,881, +,+,+, 738824 Satellite W-chromosome 585 chrUn_NT_478281v1 181 511 (ACCCCATAGGG)n 568 - 181 511 0 2 136,75, 0,255, -,-, 738830 Satellite Satellite 585 chrUn_NT_478281v1 528 1075 (ACCCCATAGGG)n 513 - 528 1075 0 2 330,173, 0,374, -,-, 738832 Satellite Satellite 585 chrUn_NT_478281v1 1214 1823 (CTCTATGGGG)n 643 + 1214 1823 0 3 277,41,122, 0,402,487, +,+,+, 738834 Satellite Satellite 585 chrUn_NT_478283v1 1224 1814 GGXHOI 371 + 1224 1814 0 2 450,125, 0,465, +,+, 738841 Satellite W-chromosome 585 chrUn_NT_478284v1 991 1871 (CCTTG)n 566 + 991 1871 0 2 312,387, 0,493, +,+, 738847 Simple_repeat Simple_repeat 585 chrUn_NT_478287v1 853 1868 GGXHOI 475 + 853 1868 0 4 303,144,188,251, 0,358,564,764, +,+,+,+, 738852 Satellite W-chromosome 585 chrUn_NT_478288v1 1208 1527 (CTCTATGGGG)n 498 + 1208 1527 0 2 161,39, 0,280, +,+, 738856 Satellite Satellite 585 chrUn_NT_478288v1 1369 1871 (ACCCATAGGG)n 720 - 1369 1871 0 2 119,383, 0,119, -,-, 738857 Satellite Satellite 585 chrUn_NT_478297v1 443 1403 (CCTTG)n 508 + 443 1403 0 3 338,11,239, 0,520,721, +,+,+, 738873 Simple_repeat Simple_repeat 585 chrUn_NT_478307v1 580 1860 GGXHOI 358 - 580 1860 0 3 407,624,178, 0,418,1102, -,-,-, 738902 Satellite W-chromosome 585 chrUn_NT_478309v1 884 1225 (GCCCCACAGCT)n 563 - 884 1225 0 2 72,257, 0,84, -,-, 738908 Satellite Satellite 585 chrUn_NT_478309v1 1360 1723 (GCCCCACAGCT)n 602 - 1360 1723 0 2 210,32, 0,331, -,-, 738910 Satellite Satellite 585 chrUn_NT_478317v1 849 1452 (CTCTATGGGG)n 570 + 849 1452 0 2 202,254, 0,349, +,+, 738931 Satellite Satellite 585 chrUn_NT_478317v1 1520 1840 (CTCTATGGGG)n 566 - 1520 1840 0 2 124,167, 0,153, -,-, 738933 Satellite Satellite 585 chrUn_NT_478326v1 1152 1839 GGXHOI 337 + 1152 1839 0 2 531,118, 0,569, +,+, 738945 Satellite W-chromosome 585 chrUn_NT_478327v1 1304 1834 GGERVL18-int 697 - 1304 1834 0 3 169,92,269, 0,169,261, -,-,-, 738949 LTR ERVL 585 chrUn_NT_478334v1 429 1652 (CAAGG)n 593 + 429 1652 0 4 189,163,233,455, 0,189,535,768, +,+,+,+, 738971 Simple_repeat Simple_repeat 585 chrUn_NT_478335v1 691 973 (GCCCCACAGCT)n 613 - 691 973 0 2 133,136, 0,146, -,-, 738977 Satellite Satellite 585 chrUn_NT_478338v1 1088 1832 GGXHOI 280 + 1088 1832 0 3 332,227,125, 0,345,619, +,+,+, 738988 Satellite W-chromosome 585 chrUn_NT_478341v1 106 304 (ACCCATAGGG)n 284 - 106 304 0 2 37,77, 0,121, -,-, 738993 Satellite Satellite 585 chrUn_NT_478341v1 646 908 (ACCCATAGGG)n 387 - 646 908 0 2 40,120, 0,142, -,-, 738997 Satellite Satellite 585 chrUn_NT_478341v1 1413 1826 (ACCCATAGGG)n 399 - 1413 1826 0 2 35,103, 0,310, -,-, 739002 Satellite Satellite 585 chrUn_NT_478350v1 515 756 (GCCCCACAGCT)n 347 + 515 756 0 2 101,91, 0,150, +,+, 739029 Satellite Satellite 585 chrUn_NT_478350v1 806 1081 (ACCCATAGAG)n 509 + 806 1081 0 2 125,106, 0,169, +,+, 739030 Satellite Satellite 585 chrUn_NT_478354v1 266 774 (ACCCCATAGGG)n 500 - 266 774 0 2 333,123, 0,385, -,-, 739040 Satellite Satellite 585 chrUn_NT_478354v1 852 1391 (ACCCCATAGGG)n 537 - 852 1391 0 3 61,207,41, 0,161,498, -,-,-, 739041 Satellite Satellite 585 chrUn_NT_478354v1 1469 1816 (ACCCCATAGGG)n 432 - 1469 1816 0 2 181,153, 0,194, -,-, 739045 Satellite Satellite 585 chrUn_NT_478358v1 1042 1395 (ACCCCATAGGG)n 380 - 1042 1395 0 2 164,161, 0,192, -,-, 739051 Satellite Satellite 585 chrUn_NT_478368v1 1077 1712 GGXHOI 253 - 1077 1712 0 2 149,443, 0,192, -,-, 739086 Satellite W-chromosome 585 chrUn_NT_478384v1 667 1047 (CTCTATGGGG)n 524 - 667 1047 0 2 62,72, 0,308, -,-, 739119 Satellite Satellite 585 chrUn_NT_478384v1 990 1649 (ACCCCATAGGG)n 446 + 990 1649 0 4 70,32,148,153, 0,191,339,506, +,+,+,+, 739122 Satellite Satellite 585 chrUn_NT_478385v1 103 321 (CAAGG)n 538 + 103 321 0 2 46,74, 0,144, +,+, 739127 Simple_repeat Simple_repeat 585 chrUn_NT_478385v1 553 1040 (CCTTG)n 501 + 553 1040 0 2 101,372, 0,115, +,+, 739129 Simple_repeat Simple_repeat 585 chrUn_NT_478389v1 1151 1744 (TTAGGG)n 598 + 1151 1744 0 3 118,98,185, 0,298,408, +,+,+, 739138 Simple_repeat Simple_repeat 585 chrUn_NT_478400v1 477 1746 (TTAGGG)n 632 + 477 1746 0 2 479,348, 0,921, +,+, 739162 Simple_repeat Simple_repeat 585 chrUn_NT_478403v1 600 1769 GGXHOI 415 - 600 1769 0 3 369,562,203, 0,386,966, -,-,-, 739169 Satellite W-chromosome 585 chrUn_NT_478405v1 1289 1756 GGXHOI 314 - 1289 1756 0 2 85,345, 0,122, -,-, 739172 Satellite W-chromosome 585 chrUn_NT_478407v1 343 1569 (TTAGGG)n 679 + 343 1569 0 2 563,602, 0,624, +,+, 739177 Simple_repeat Simple_repeat 585 chrUn_NT_478408v1 246 508 (ACCCATAGGG)n 476 + 246 508 0 2 115,109, 0,153, +,+, 739181 Satellite Satellite 585 chrUn_NT_478411v1 822 878 (CGC)n 390 + 822 878 0 2 12,6, 0,50, +,+, 739193 Simple_repeat Simple_repeat 585 chrUn_NT_478417v1 689 1596 GGXHOI 354 - 689 1596 0 2 591,280, 0,627, -,-, 739218 Satellite W-chromosome 585 chrUn_NT_478418v1 763 1686 GGXHOI 332 + 763 1686 0 2 230,675, 0,248, +,+, 739221 Satellite W-chromosome 585 chrUn_NT_478423v1 592 668 (CCCT)n 346 + 592 668 0 2 9,38, 0,38, +,+, 739233 Simple_repeat Simple_repeat 585 chrUn_NT_478425v1 581 1455 (ACCCCATAGGG)n 713 - 581 1455 0 3 437,24,273, 0,566,601, -,-,-, 739249 Satellite Satellite 585 chrUn_NT_478425v1 1511 1771 (ACCCCATAGGG)n 702 - 1511 1771 0 2 100,21, 0,239, -,-, 739252 Satellite Satellite 585 chrUn_NT_478426v1 1307 1615 (ACCCATTGGG)n 389 + 1307 1615 0 2 133,150, 0,158, +,+, 739257 Satellite Satellite 585 chrUn_NT_478427v1 415 913 (ACCCATTGGG)n 301 - 415 913 0 4 78,44,113,111, 0,183,245,387, -,-,-,-, 739259 Satellite Satellite 585 chrUn_NT_478427v1 1223 1752 (CCCCATTGGG)n 404 - 1223 1752 0 4 107,115,170,113, 0,107,234,416, -,-,-,-, 739262 Satellite Satellite 585 chrUn_NT_478430v1 479 580 CR1-C3 537 + 479 580 0 2 54,47, 0,54, +,+, 739267 LINE CR1 585 chrUn_NT_478430v1 659 767 CR1-B 577 + 659 767 0 2 58,50, 0,58, +,+, 739269 LINE CR1 585 chrUn_NT_478430v1 1503 1597 CR1-C4 626 + 1503 1597 0 2 47,47, 0,47, +,+, 739276 LINE CR1 585 chrUn_NT_478434v1 811 1466 (TTAGGG)n 619 + 811 1466 0 3 201,180,213, 0,229,442, +,+,+, 739285 Simple_repeat Simple_repeat 585 chrUn_NT_478442v1 361 644 (CCCCATTGGG)n 297 - 361 644 0 2 139,130, 0,153, -,-, 739297 Satellite Satellite 585 chrUn_NT_478442v1 622 1734 (ACCCATTGGG)n 527 + 622 1734 0 5 157,402,146,160,212, 0,170,572,740,900, +,+,+,+,+, 739298 Satellite Satellite 585 chrUn_NT_478443v1 344 1387 GGXHOI 496 - 344 1387 0 3 122,180,365, 0,133,678, -,-,-, 739300 Satellite W-chromosome 585 chrUn_NT_478444v1 66 436 (CGAGG)n 559 + 66 436 0 2 169,170, 0,200, +,+, 739304 Simple_repeat Simple_repeat 585 chrUn_NT_478446v1 401 1733 (TTAGGG)n 602 + 401 1733 0 4 362,185,185,485, 0,398,636,847, +,+,+,+, 739316 Simple_repeat Simple_repeat 585 chrUn_NT_478452v1 350 1723 GGXHOI 425 - 350 1723 0 2 901,454, 0,919, -,-, 739323 Satellite W-chromosome 585 chrUn_NT_478454v1 424 1352 GGXHOI 309 + 424 1352 0 2 720,165, 0,763, +,+, 739328 Satellite W-chromosome 585 chrUn_NT_478457v1 155 603 (ACCCCATAGGG)n 619 - 155 603 0 3 145,134,40, 0,145,408, -,-,-, 739342 Satellite Satellite 585 chrUn_NT_478457v1 454 825 (ACCCCATAGGG)n 616 + 454 825 0 2 120,127, 0,244, +,+, 739344 Satellite Satellite 585 chrUn_NT_478457v1 1345 1717 (ACCCCATAGGG)n 576 + 1345 1717 0 2 194,53, 0,319, +,+, 739348 Satellite Satellite 585 chrUn_NT_478461v1 373 1720 GGXHOI 432 + 373 1720 0 4 483,179,166,352, 0,545,774,995, +,+,+,+, 739354 Satellite W-chromosome 585 chrUn_NT_478465v1 465 1645 GGXHOI 516 + 465 1645 0 2 68,701, 0,479, +,+, 739366 Satellite W-chromosome 585 chrUn_NT_478468v1 684 1012 (ACCCATAGAG)n 496 + 684 1012 0 2 155,32, 0,296, +,+, 739370 Satellite Satellite 585 chrUn_NT_478468v1 1067 1490 (ACCCATAGAG)n 685 - 1067 1490 0 2 131,237, 0,186, -,-, 739373 Satellite Satellite 585 chrUn_NT_478480v1 1345 1466 A-rich 406 + 1345 1466 0 2 37,60, 0,61, +,+, 739400 Low_complexity Low_complexity 585 chrUn_NT_478483v1 342 608 (ACCCCATAGGG)n 338 - 342 608 0 2 124,27, 0,239, -,-, 739408 Satellite Satellite 585 chrUn_NT_478483v1 688 1676 (ACCCCATAGGG)n 385 - 688 1676 0 6 130,130,102,117,127,126, 0,159,409,538,706,862, -,-,-,-,-,-, 739410 Satellite Satellite 585 chrUn_NT_478492v1 656 1695 GGXHOI 336 + 656 1695 0 2 214,763, 0,276, +,+, 739428 Satellite W-chromosome 585 chrUn_NT_478493v1 754 1003 (CCCCATTGGG)n 373 - 754 1003 0 2 113,103, 0,146, -,-, 739433 Satellite Satellite 585 chrUn_NT_478499v1 337 708 (ACCCATTGGG)n 449 - 337 708 0 2 196,131, 0,240, -,-, 739450 Satellite Satellite 585 chrUn_NT_478499v1 812 1323 (ACCCATTGGG)n 443 - 812 1323 0 2 367,127, 0,384, -,-, 739451 Satellite Satellite 585 chrUn_NT_478505v1 1078 1498 (CAAGG)n 589 + 1078 1498 0 3 45,173,189, 0,45,231, +,+,+, 739461 Simple_repeat Simple_repeat 585 chrUn_NT_478507v1 1117 1496 (ACCCATAGAG)n 569 + 1117 1496 0 3 120,111,27, 0,120,352, +,+,+, 739467 Satellite Satellite 585 chrUn_NT_478512v1 532 737 (TGGGGCTCTA)n 817 + 532 737 0 2 92,60, 0,145, +,+, 739478 Simple_repeat Simple_repeat 585 chrUn_NT_478515v1 841 1654 GGXHOI 373 + 841 1654 0 3 266,171,344, 0,282,469, +,+,+, 739487 Satellite W-chromosome 585 chrUn_NT_478520v1 353 1591 GGXHOI 408 + 353 1591 0 2 1046,174, 0,1064, +,+, 739505 Satellite W-chromosome 585 chrUn_NT_478521v1 963 1449 (ACCCCATAGGG)n 634 + 963 1449 0 2 148,335, 0,151, +,+, 739510 Satellite Satellite 585 chrUn_NT_478521v1 1296 1653 (ACCCATAGAG)n 687 + 1296 1653 0 2 214,129, 0,228, +,+, 739511 Satellite Satellite 585 chrUn_NT_478529v1 498 1536 (CTCTATGGGG)n 670 + 498 1536 0 3 287,12,23, 0,873,1015, +,+,+, 739532 Satellite Satellite 585 chrUn_NT_478529v1 874 1371 (ACCCATAGAG)n 676 - 874 1371 0 2 347,32, 0,465, -,-, 739534 Satellite Satellite 585 chrUn_NT_478531v1 351 1212 (ACCCCATAGGG)n 519 + 351 1212 0 4 122,130,123,385, 0,168,340,476, +,+,+,+, 739539 Satellite Satellite 585 chrUn_NT_478531v1 1286 1564 (ACCCCATAGGG)n 462 + 1286 1564 0 2 123,141, 0,137, +,+, 739540 Satellite Satellite 585 chrUn_NT_478535v1 174 225 (CAGGC)n 412 + 174 225 0 2 15,10, 0,41, +,+, 739546 Simple_repeat Simple_repeat 585 chrUn_NT_478535v1 480 1267 (CAAGG)n 598 + 480 1267 0 4 209,96,44,240, 0,228,503,547, +,+,+,+, 739549 Simple_repeat Simple_repeat 585 chrUn_NT_478548v1 227 841 CR1-H 382 + 227 841 0 2 207,373, 0,241, +,+, 739577 LINE CR1 585 chrUn_NT_478565v1 281 957 GGXHOI 317 - 281 957 0 2 352,306, 0,370, -,-, 739611 Satellite W-chromosome 585 chrUn_NT_478565v1 1103 1651 GGXHOI 388 - 1103 1651 0 2 253,280, 0,268, -,-, 739612 Satellite W-chromosome 585 chrUn_NT_478566v1 161 320 (CTCCA)n 222 + 161 320 0 2 30,99, 0,60, +,+, 739614 Simple_repeat Simple_repeat 585 chrUn_NT_478569v1 282 573 (ACCCCATAGGG)n 478 - 282 573 0 2 134,25, 0,266, -,-, 739620 Satellite Satellite 585 chrUn_NT_478569v1 1013 1296 (ACCCCATAGGG)n 467 - 1013 1296 0 2 128,139, 0,144, -,-, 739624 Satellite Satellite 585 chrUn_NT_478571v1 531 871 (ACCCCATAGGG)n 311 + 531 871 0 2 146,152, 0,188, +,+, 739631 Satellite Satellite 585 chrUn_NT_478571v1 962 1310 (ACCCCATAGGG)n 320 + 962 1310 0 2 164,148, 0,200, +,+, 739632 Satellite Satellite 585 chrUn_NT_478578v1 405 781 (CTCTATGGGG)n 542 + 405 781 0 2 150,193, 0,183, +,+, 739647 Satellite Satellite 585 chrUn_NT_478578v1 1348 1630 (CTCTATGGGG)n 608 + 1348 1630 0 2 132,130, 0,152, +,+, 739651 Satellite Satellite 585 chrUn_NT_478583v1 1093 1516 (CTCTATGGGG)n 384 + 1093 1516 0 2 233,38, 0,385, +,+, 739662 Satellite Satellite 585 chrUn_NT_478586v1 84 1165 (CAAGG)n 625 + 84 1165 0 3 484,175,366, 0,502,715, +,+,+, 739674 Simple_repeat Simple_repeat 585 chrUn_NT_478599v1 856 1417 GGXHOI 386 + 856 1417 0 2 355,150, 0,411, +,+, 739707 Satellite W-chromosome 585 chrUn_NT_478609v1 297 1414 CR1-B2 690 - 297 1414 0 2 890,224, 0,893, -,-, 739723 LINE CR1 585 chrUn_NT_478611v1 51 1261 (CCCTAA)n 531 + 51 1261 0 3 208,372,446, 0,219,764, +,+,+, 739729 Simple_repeat Simple_repeat 585 chrUn_NT_478612v1 758 1604 GGXHOI 359 - 758 1604 0 2 293,533, 0,313, -,-, 739734 Satellite W-chromosome 585 chrUn_NT_478614v1 201 822 CR1-H 396 + 201 822 0 2 208,377, 0,244, +,+, 739739 LINE CR1 585 chrUn_NT_478625v1 896 1263 (CCTCG)n 604 + 896 1263 0 2 127,56, 0,311, +,+, 739765 Simple_repeat Simple_repeat 585 chrUn_NT_478630v1 1085 1602 GGXHOI 404 + 1085 1602 0 2 147,359, 0,158, +,+, 739779 Satellite W-chromosome 585 chrUn_NT_478634v1 249 1247 (TTAGGG)n 644 + 249 1247 0 4 360,209,208,204, 0,360,574,794, +,+,+,+, 739795 Simple_repeat Simple_repeat 585 chrUn_NT_478655v1 516 1590 GGXHOI 429 + 516 1590 0 2 776,270, 0,804, +,+, 739835 Satellite W-chromosome 585 chrUn_NT_478657v1 1221 1527 (ACCCCATAGGG)n 430 + 1221 1527 0 2 101,30, 0,276, +,+, 739844 Satellite Satellite 585 chrUn_NT_478660v1 327 583 (ACCCCATAGGG)n 511 + 327 583 0 2 120,124, 0,132, +,+, 739851 Satellite Satellite 585 chrUn_NT_478663v1 410 1482 GGXHOI 361 - 410 1482 0 4 149,567,133,144, 0,184,782,928, -,-,-,-, 739860 Satellite W-chromosome 585 chrUn_NT_478664v1 204 341 (GGCGA)n 372 + 204 341 0 2 81,9, 0,128, +,+, 739862 Simple_repeat Simple_repeat 585 chrUn_NT_478664v1 674 1579 (CGAGG)n 473 + 674 1579 0 2 545,334, 0,571, +,+, 739866 Simple_repeat Simple_repeat 585 chrUn_NT_478670v1 1024 1575 GGXHOI 326 + 1024 1575 0 2 245,251, 0,300, +,+, 739881 Satellite W-chromosome 585 chrUn_NT_478676v1 1039 1573 GGXHOI 371 - 1039 1573 0 2 208,310, 0,224, -,-, 739894 Satellite W-chromosome 585 chrUn_NT_478693v1 279 1561 GGXHOI 533 - 279 1561 0 2 1026,206, 0,1076, -,-, 739936 Satellite W-chromosome 585 chrUn_NT_478701v1 285 746 (TTAGGG)n 814 + 285 746 0 2 121,135, 0,326, +,+, 739956 Simple_repeat Simple_repeat 585 chrUn_NT_478712v1 605 1519 GGXHOI 352 + 605 1519 0 2 382,476, 0,438, +,+, 739987 Satellite W-chromosome 585 chrUn_NT_478724v1 1060 1533 GGXHOI 368 - 1060 1533 0 3 158,137,148, 0,175,325, -,-,-, 740010 Satellite W-chromosome 585 chrUn_NT_478728v1 104 1504 (CGAGG)n 508 + 104 1504 0 2 1169,186, 0,1214, +,+, 740015 Simple_repeat Simple_repeat 585 chrUn_NT_478732v1 939 1526 ENS1-int 649 - 939 1526 0 2 482,105, 0,482, -,-, 740022 LTR ERVL 585 chrUn_NT_478736v1 313 956 (ACCCCATAGGG)n 402 - 313 956 0 3 185,71,287, 0,212,356, -,-,-, 740029 Satellite Satellite 585 chrUn_NT_478736v1 1013 1519 (ACCCATAGGG)n 694 - 1013 1519 0 2 121,324, 0,182, -,-, 740033 Satellite Satellite 585 chrUn_NT_478741v1 350 572 (ACCCATAGGG)n 326 - 350 572 0 2 40,82, 0,140, -,-, 740041 Satellite Satellite 585 chrUn_NT_478741v1 715 918 (ACCCATAGAG)n 414 - 715 918 0 2 42,95, 0,108, -,-, 740044 Satellite Satellite 585 chrUn_NT_478741v1 1152 1523 (ACCCATAGAG)n 357 - 1152 1523 0 3 53,87,73, 0,129,298, -,-,-, 740049 Satellite Satellite 585 chrUn_NT_478742v1 740 1523 GGXHOI 299 + 740 1523 0 4 159,164,264,121, 0,199,381,662, +,+,+,+, 740053 Satellite W-chromosome 585 chrUn_NT_478751v1 237 1352 (CAAGG)n 599 + 237 1352 0 4 178,172,310,221, 0,211,383,894, +,+,+,+, 740064 Simple_repeat Simple_repeat 585 chrUn_NT_478757v1 795 1513 GGXHOI 421 - 795 1513 0 2 144,559, 0,159, -,-, 740068 Satellite W-chromosome 585 chrUn_NT_478767v1 78 907 (CCTTG)n 492 + 78 907 0 2 512,125, 0,704, +,+, 740081 Simple_repeat Simple_repeat 585 chrUn_NT_478774v1 729 1504 GGXHOI 560 - 729 1504 0 2 485,35, 0,740, -,-, 740097 Satellite W-chromosome 585 chrUn_NT_478782v1 364 685 (CTCTATGGGG)n 624 - 364 685 0 2 168,133, 0,188, -,-, 740116 Satellite Satellite 585 chrUn_NT_478782v1 840 1245 (CTCTATGGGG)n 584 - 840 1245 0 2 186,69, 0,336, -,-, 740117 Satellite Satellite 585 chrUn_NT_478783v1 343 1488 GGXHOI 390 + 343 1488 0 3 270,702,104, 0,306,1041, +,+,+, 740122 Satellite W-chromosome 585 chrUn_NT_478786v1 713 1478 GGXHOI 358 + 713 1478 0 2 471,251, 0,514, +,+, 740126 Satellite W-chromosome 585 chrUn_NT_478796v1 808 1185 (ACCCCATAGGG)n 326 - 808 1185 0 2 169,174, 0,203, -,-, 740139 Satellite Satellite 585 chrUn_NT_478803v1 133 763 CR1-B2 637 + 133 763 0 3 60,54,55, 0,181,575, +,+,+, 740159 LINE CR1 585 chrUn_NT_478803v1 364 454 CR1-C4 618 + 364 454 0 2 47,43, 0,47, +,+, 740162 LINE CR1 585 chrUn_NT_478803v1 893 988 CR1-C3 629 + 893 988 0 2 58,37, 0,58, +,+, 740168 LINE CR1 585 chrUn_NT_478803v1 985 1135 CR1-E 569 + 985 1135 0 2 58,58, 0,92, +,+, 740169 LINE CR1 585 chrUn_NT_478809v1 905 1396 GGXHOI 399 + 905 1396 0 2 320,132, 0,359, +,+, 740185 Satellite W-chromosome 585 chrUn_NT_478819v1 452 924 (CTCTATGGGG)n 520 + 452 924 0 2 315,20, 0,452, +,+, 740210 Satellite Satellite 585 chrUn_NT_478826v1 630 1454 GGXHOI 420 - 630 1454 0 2 487,319, 0,505, -,-, 740228 Satellite W-chromosome 585 chrUn_NT_478837v1 696 891 (CAGAT)n 190 + 696 891 0 2 84,8, 0,187, +,+, 740243 Simple_repeat Simple_repeat 585 chrUn_NT_478849v1 237 1433 GGXHOI 412 + 237 1433 0 2 478,704, 0,492, +,+, 740273 Satellite W-chromosome 585 chrUn_NT_478857v1 644 1428 GGXHOI 362 - 644 1428 0 2 234,511, 0,273, -,-, 740293 Satellite W-chromosome 585 chrUn_NT_478864v1 278 1413 GGXHOI 556 - 278 1413 0 2 513,405, 0,730, -,-, 740305 Satellite W-chromosome 585 chrUn_NT_478869v1 805 1133 (CTCTATGGGG)n 327 + 805 1133 0 2 125,151, 0,177, +,+, 740317 Satellite Satellite 585 chrUn_NT_478876v1 91 530 (ACCCCATAGGG)n 530 + 91 530 0 2 169,36, 0,403, +,+, 740330 Satellite Satellite 585 chrUn_NT_478876v1 987 1410 (CTCTATGGGG)n 670 - 987 1410 0 2 127,102, 0,321, -,-, 740334 Satellite Satellite 585 chrUn_NT_478882v1 1172 1401 (CTCTATGGGG)n 542 + 1172 1401 0 2 54,49, 0,180, +,+, 740344 Satellite Satellite 585 chrUn_NT_478884v1 508 1377 GGXHOI 488 - 508 1377 0 3 216,66,149, 0,269,720, -,-,-, 740349 Satellite W-chromosome 585 chrUn_NT_478885v1 824 1278 (CCTTG)n 551 + 824 1278 0 2 250,178, 0,276, +,+, 740353 Simple_repeat Simple_repeat 585 chrUn_NT_478888v1 718 1191 (GCCCCACAGCT)n 507 + 718 1191 0 3 183,134,134, 0,194,339, +,+,+, 740358 Satellite Satellite 585 chrUn_NT_478904v1 625 1391 GGXHOI 385 - 625 1391 0 3 308,115,315, 0,319,451, -,-,-, 740394 Satellite W-chromosome 585 chrUn_NT_478913v1 292 1380 (CCCTAA)n 696 + 292 1380 0 2 194,858, 0,230, +,+, 740414 Simple_repeat Simple_repeat 585 chrUn_NT_478920v1 465 748 (ACCCATAGGG)n 442 + 465 748 0 2 139,112, 0,171, +,+, 740427 Satellite Satellite 585 chrUn_NT_478920v1 1100 1372 (ACCCATAGGG)n 485 + 1100 1372 0 2 117,106, 0,166, +,+, 740430 Satellite Satellite 585 chrUn_NT_478930v1 642 1362 GGXHOI 342 + 642 1362 0 3 214,135,279, 0,263,441, +,+,+, 740444 Satellite W-chromosome 585 chrUn_NT_478942v1 550 909 (CTCTATGGGG)n 783 - 550 909 0 3 107,81,119, 0,132,240, -,-,-, 740471 Satellite Satellite 585 chrUn_NT_478952v1 768 1162 (CGAGG)n 521 + 768 1162 0 2 184,173, 0,221, +,+, 740493 Simple_repeat Simple_repeat 585 chrUn_NT_478964v1 428 721 (ACCCATAGAG)n 478 - 428 721 0 2 137,109, 0,184, -,-, 740519 Satellite Satellite 585 chrUn_NT_478964v1 925 1178 (GCCCCACAGCT)n 583 + 925 1178 0 2 108,110, 0,143, +,+, 740520 Satellite Satellite 585 chrUn_NT_478976v1 293 616 GGXHOI 390 - 293 616 0 2 140,165, 0,158, -,-, 740538 Satellite W-chromosome 585 chrUn_NT_478976v1 706 1297 GGXHOI 325 - 706 1297 0 2 172,402, 0,189, -,-, 740539 Satellite W-chromosome 585 chrUn_NT_478989v1 948 1307 (ACCCATAGGG)n 536 + 948 1307 0 2 158,60, 0,299, +,+, 740564 Satellite Satellite 585 chrUn_NT_478997v1 267 1300 GGXHOI 361 - 267 1300 0 2 287,710, 0,323, -,-, 740576 Satellite W-chromosome 585 chrUn_NT_479000v1 910 1294 (GGAAA)n 826 + 910 1294 0 2 182,181, 0,203, +,+, 740590 Simple_repeat Simple_repeat 585 chrUn_NT_479008v1 276 1212 GGXHOI 399 - 276 1212 0 2 733,140, 0,796, -,-, 740598 Satellite W-chromosome 585 chrUn_NT_479022v1 1 1235 GGXHOI 545 + 1 1235 0 3 364,299,137, 0,778,1097, +,+,+, 740621 Satellite W-chromosome 585 chrUn_NT_479036v1 786 1258 GGXHOI 367 + 786 1258 0 2 254,192, 0,280, +,+, 740649 Satellite W-chromosome 585 chrUn_NT_479041v1 690 1222 (ACCCCATAGGG)n 275 + 690 1222 0 2 97,401, 0,131, +,+, 740663 Satellite Satellite 585 chrUn_NT_479042v1 217 890 GGXHOI 419 - 217 890 0 2 403,208, 0,465, -,-, 740666 Satellite W-chromosome 585 chrUn_NT_479056v1 841 1239 (CAAGG)n 562 + 841 1239 0 2 188,210, 0,188, +,+, 740693 Simple_repeat Simple_repeat 585 chrUn_NT_479057v1 416 1210 GGXHOI 373 - 416 1210 0 2 239,543, 0,251, -,-, 740695 Satellite W-chromosome 585 chrUn_NT_479073v1 405 1074 (CCTCG)n 483 + 405 1074 0 3 247,185,182, 0,272,487, +,+,+, 740724 Simple_repeat Simple_repeat 585 chrUn_NT_479075v1 87 587 GGERVL-A-int 446 - 87 587 0 2 161,228, 0,272, -,-, 740730 LTR ERVL 585 chrUn_NT_479082v1 748 1175 (GCCCCACAGCT)n 311 - 748 1175 0 2 283,132, 0,295, -,-, 740747 Satellite Satellite 585 chrUn_NT_479086v1 886 1195 (CTCTATGGGG)n 225 - 886 1195 0 2 103,152, 0,157, -,-, 740754 Satellite Satellite 585 chrUn_NT_479088v1 600 1024 (ACCCATTGGG)n 311 + 600 1024 0 2 266,127, 0,297, +,+, 740756 Satellite Satellite 585 chrUn_NT_479098v1 704 1197 GGXHOI 373 - 704 1197 0 3 139,164,138, 0,175,355, -,-,-, 740781 Satellite W-chromosome 585 chrUn_NT_479100v1 898 1197 GGXHOI 407 - 898 1197 0 2 143,141, 0,158, -,-, 740785 Satellite W-chromosome 585 chrUn_NT_479107v1 490 1201 (CCTTG)n 578 + 490 1201 0 2 495,185, 0,526, +,+, 740801 Simple_repeat Simple_repeat 585 chrUn_NT_479137v1 737 1107 (ACCCATAGGG)n 678 + 737 1107 0 2 235,114, 0,256, +,+, 740844 Satellite Satellite 585 chrUn_NT_479144v1 561 1137 (GCCCCACAGCT)n 440 - 561 1137 0 3 101,260,147, 0,119,429, -,-,-, 740855 Satellite Satellite 585 chrUn_NT_479151v1 876 1142 GGXHOI 272 + 876 1142 0 2 114,117, 0,149, +,+, 740864 Satellite W-chromosome 585 chrUn_NT_479162v1 300 584 (GCCCCACAGCT)n 678 + 300 584 0 2 131,130, 0,154, +,+, 740884 Satellite Satellite 585 chrUn_NT_479162v1 781 1015 (ACCCCATAGGG)n 358 + 781 1015 0 2 72,31, 0,203, +,+, 740886 Satellite Satellite 585 chrUn_NT_479184v1 435 750 (ACCCCATAGGG)n 469 + 435 750 0 2 137,155, 0,160, +,+, 740925 Satellite Satellite 585 chrUn_NT_479194v1 799 1095 GGXHOI 303 + 799 1095 0 2 142,105, 0,191, +,+, 740944 Satellite W-chromosome 585 chrUn_NT_479200v1 228 836 (ACCCATTGGG)n 476 - 228 836 0 4 169,130,117,145, 0,180,325,463, -,-,-,-, 740952 Satellite Satellite 585 chrUn_NT_479202v1 376 1060 (CAAGG)n 541 + 376 1060 0 3 178,213,215, 0,213,469, +,+,+, 740955 Simple_repeat Simple_repeat 585 chrUn_NT_479206v1 472 555 GA-rich 544 + 472 555 0 2 44,17, 0,66, +,+, 740961 Low_complexity Low_complexity 585 chrUn_NT_479213v1 224 1068 GGXHOI 424 - 224 1068 0 2 582,245, 0,599, -,-, 740971 Satellite W-chromosome 585 chrUn_NT_479216v1 685 1064 (TTCTG)n 530 + 685 1064 0 2 111,85, 0,294, +,+, 740978 Simple_repeat Simple_repeat 585 chrUn_NT_479218v1 652 1043 GGXHOI 471 + 652 1043 0 2 215,165, 0,226, +,+, 740982 Satellite W-chromosome 585 chrUn_NT_479233v1 380 786 (ACCCCATAGGG)n 442 + 380 786 0 3 119,117,109, 0,140,297, +,+,+, 741002 Satellite Satellite 585 chrUn_NT_479250v1 400 720 (ACCCCATAGGG)n 327 - 400 720 0 2 138,138, 0,182, -,-, 741035 Satellite Satellite 585 chrUn_NT_479265v1 274 889 (CACTG)n 384 + 274 889 0 2 172,182, 0,433, +,+, 741064 Simple_repeat Simple_repeat 585 chrUn_NT_479267v1 428 703 (ACCCATAGAG)n 628 + 428 703 0 2 82,74, 0,201, +,+, 741071 Satellite Satellite 585 chrUn_NT_479317v1 761 1080 CR1-G 612 - 761 1080 0 2 222,97, 0,222, -,-, 741145 LINE CR1 585 chrUn_NT_479354v1 1516 1856 GGERV10_LTR 243 + 1516 1856 0 2 78,175, 0,165, +,+, 741197 LTR ERVL 585 chrUn_NT_479357v1 715 1141 (ACCCCATAGGG)n 384 - 715 1141 0 3 120,143,108, 0,142,318, -,-,-, 741205 Satellite Satellite 585 chrUn_NT_479361v1 1781 2143 (CCCCATTGGG)n 180 + 1781 2143 0 2 156,182, 0,180, +,+, 741212 Satellite Satellite 585 chrUn_NT_479367v1 691 1111 (ACCCATAGGG)n 653 + 691 1111 0 2 256,121, 0,299, +,+, 741227 Satellite Satellite 585 chrUn_NT_479370v1 597 786 (ACCCCATAGGG)n 464 - 597 786 0 2 36,101, 0,88, -,-, 741233 Satellite Satellite 585 chrUn_NT_479370v1 826 1280 (ACCCCATAGGG)n 659 + 826 1280 0 2 137,278, 0,176, +,+, 741235 Satellite Satellite 585 chrUn_NT_479371v1 314 1004 (ACCCATAGGG)n 772 + 314 1004 0 2 161,412, 0,278, +,+, 741239 Satellite Satellite 585 chrUn_NT_479371v1 594 1021 (ACCCATAGAG)n 772 + 594 1021 0 2 87,227, 0,200, +,+, 741241 Satellite Satellite 585 chrUn_NT_479388v1 358 762 (ACCCCATAGGG)n 637 + 358 762 0 3 69,26,119, 0,242,285, +,+,+, 741279 Satellite Satellite 585 chrUn_NT_479388v1 575 820 (CTCTATGGGG)n 610 - 575 820 0 2 68,58, 0,187, -,-, 741282 Satellite Satellite 585 chrUn_NT_479396v1 1177 1457 (CTCTATGGGG)n 568 + 1177 1457 0 2 115,46, 0,234, +,+, 741298 Satellite Satellite 585 chrUn_NT_479400v1 757 1288 (ACCCCATAGGG)n 396 - 757 1288 0 3 115,95,65, 0,248,466, -,-,-, 741305 Satellite Satellite 585 chrUn_NT_479403v1 342 591 (CTCTATGGGG)n 550 - 342 591 0 2 131,104, 0,145, -,-, 741318 Satellite Satellite 585 chrUn_NT_479406v1 160 492 (CTCTATGGGG)n 470 - 160 492 0 2 184,148, 0,184, -,-, 741326 Satellite Satellite 585 chrUn_NT_479408v1 332 611 (ACCCCATAGGG)n 501 + 332 611 0 2 124,121, 0,158, +,+, 741330 Satellite Satellite 585 chrUn_NT_479411v1 850 1220 (ACCCATTGGG)n 244 + 850 1220 0 2 156,154, 0,216, +,+, 741339 Satellite Satellite 585 chrUn_NT_479412v1 637 996 (ACCCATAGAG)n 484 - 637 996 0 2 151,98, 0,261, -,-, 741341 Satellite Satellite 585 chrUn_NT_479418v1 856 1212 (ACCCATAGGG)n 449 + 856 1212 0 3 100,14,117, 0,162,239, +,+,+, 741348 Satellite Satellite 585 chrUn_NT_479424v1 355 922 (CTCTATGGGG)n 264 + 355 922 0 3 124,251,116, 0,158,451, +,+,+, 741362 Satellite Satellite 585 chrUn_NT_479437v1 1703 2261 (ACCCATAGAG)n 674 - 1703 2261 0 3 136,126,50, 0,259,508, -,-,-, 741391 Satellite Satellite 585 chrUn_NT_479437v1 2554 3082 (ACCCATAGAG)n 710 + 2554 3082 0 2 88,62, 0,466, +,+, 741397 Satellite Satellite 585 chrUn_NT_479437v1 2642 3766 (ACCCATAGAG)n 690 - 2642 3766 0 3 378,399,74, 0,451,1050, -,-,-, 741398 Satellite Satellite 585 chrUn_NT_479448v1 208 1247 (ACCCCATAGGG)n 661 + 208 1247 0 4 400,296,123,117, 0,416,761,922, +,+,+,+, 741427 Satellite Satellite 585 chrUn_NT_479461v1 432 896 (ACCCCATAGGG)n 596 + 432 896 0 2 185,206, 0,258, +,+, 741453 Satellite Satellite 585 chrUn_NT_479462v1 251 547 (GAGTG)n 537 + 251 547 0 3 53,178,35, 0,68,261, +,+,+, 741460 Simple_repeat Simple_repeat 585 chrUn_NT_479477v1 551 1207 (ACCCCATAGGG)n 441 + 551 1207 0 3 337,129,136, 0,370,520, +,+,+, 741492 Satellite Satellite 585 chrUn_NT_479483v1 4073 4815 (ACCCCATAGGG)n 594 - 4073 4815 0 4 190,93,15,32, 0,317,529,710, -,-,-,-, 741516 Satellite Satellite 585 chrUn_NT_479483v1 4483 5005 (CTCTATGGGG)n 616 - 4483 5005 0 3 119,166,222, 0,134,300, -,-,-, 741518 Satellite Satellite 585 chrUn_NT_479483v1 5193 5913 (ACCCCATAGGG)n 573 - 5193 5913 0 2 318,402, 0,318, -,-, 741521 Satellite Satellite 585 chrUn_NT_479483v1 5906 6283 (CTCTATGGGG)n 620 + 5906 6283 0 2 95,158, 0,219, +,+, 741522 Satellite Satellite 585 chrUn_NT_479483v1 6140 6591 (ACCCCATAGGG)n 610 - 6140 6591 0 2 112,213, 0,238, -,-, 741524 Satellite Satellite 585 chrUn_NT_479484v1 770 1159 (GAGTG)n 452 + 770 1159 0 2 100,271, 0,118, +,+, 741531 Simple_repeat Simple_repeat 585 chrUn_NT_479486v1 922 1118 (GGACG)n 354 + 922 1118 0 2 53,15, 0,181, +,+, 741539 Simple_repeat Simple_repeat 585 chrUn_NT_479490v1 153 765 (ACCCATAGGG)n 680 + 153 765 0 2 256,356, 0,256, +,+, 741547 Satellite Satellite 585 chrUn_NT_479490v1 756 1111 (ACCCATAGGG)n 692 + 756 1111 0 2 112,134, 0,221, +,+, 741549 Satellite Satellite 585 chrUn_NT_479491v1 2348 2862 (CTCTATGGGG)n 678 - 2348 2862 0 3 148,94,149, 0,148,365, -,-,-, 741557 Satellite Satellite 585 chrUn_NT_479491v1 2706 3584 (ACCCCATAGGG)n 606 - 2706 3584 0 4 167,12,76,54, 0,291,529,824, -,-,-,-, 741559 Satellite Satellite 585 chrUn_NT_479491v1 3648 4178 (ACCCATAGAG)n 652 - 3648 4178 0 3 72,52,123, 0,310,407, -,-,-, 741566 Satellite Satellite 585 chrUn_NT_479491v1 3940 4293 (ACCCCATAGGG)n 608 - 3940 4293 0 2 115,41, 0,312, -,-, 741568 Satellite Satellite 585 chrUn_NT_479491v1 4386 4955 (ACCCCATAGGG)n 630 - 4386 4955 0 2 65,22, 0,547, -,-, 741571 Satellite Satellite 585 chrUn_NT_479491v1 4578 4933 (CTCTATGGGG)n 625 - 4578 4933 0 2 229,126, 0,229, -,-, 741573 Satellite Satellite 585 chrUn_NT_479491v1 5083 5539 (ACCCCATAGGG)n 590 - 5083 5539 0 2 239,63, 0,393, -,-, 741575 Satellite Satellite 585 chrUn_NT_479493v1 392 776 (CTCTATGGGG)n 704 + 392 776 0 2 124,21, 0,363, +,+, 741581 Satellite Satellite 585 chrUn_NT_479493v1 787 1016 (CTCTATGGGG)n 674 - 787 1016 0 2 90,19, 0,210, -,-, 741584 Satellite Satellite 585 chrUn_NT_479499v1 273 537 (TCCA)n 649 + 273 537 0 2 165,42, 0,222, +,+, 741595 Simple_repeat Simple_repeat 585 chrUn_NT_479509v1 1326 1668 GGLTR11 536 + 1326 1668 0 2 62,241, 0,101, +,+, 741619 LTR ERV1 585 chrUn_NT_479516v1 218 584 (ACCCCATAGGG)n 651 - 218 584 0 3 61,33,126, 0,187,240, -,-,-, 741627 Satellite Satellite 585 chrUn_NT_479516v1 776 1060 (CTCTATGGGG)n 618 + 776 1060 0 2 91,61, 0,223, +,+, 741629 Satellite Satellite 585 chrUn_NT_479516v1 2225 2956 (GCCCCACAGCT)n 442 + 2225 2956 0 4 121,149,168,252, 0,132,300,479, +,+,+,+, 741639 Satellite Satellite 585 chrUn_NT_479516v1 5641 6063 (ACCCCATAGGG)n 297 - 5641 6063 0 3 114,51,119, 0,213,303, -,-,-, 741640 Satellite Satellite 585 chrUn_NT_479521v1 517 993 (GACTG)n 324 + 517 993 0 2 206,59, 0,417, +,+, 741661 Simple_repeat Simple_repeat 585 chrUn_NT_479522v1 730 981 (ACCCCATAGGG)n 458 - 730 981 0 2 77,66, 0,185, -,-, 741666 Satellite Satellite 585 chrUn_NT_479531v1 575 1236 (CTCTATGGGG)n 599 + 575 1236 0 4 158,142,94,34, 0,172,314,627, +,+,+,+, 741687 Satellite Satellite 585 chrW 312 4332 GGERVL-C-int 733 + 312 4332 0 3 1919,1598,503, 0,1919,3517, +,+,+, 741700 LTR ERVL 585 chrW 4332 5442 GGERV20_I-int 334 + 4332 5442 0 2 327,145, 0,965, +,+, 741701 LTR ERVL 585 chrW 5693 7290 GGERVL-A-int 596 - 5693 7290 0 4 79,786,135,125, 0,79,1333,1472, -,-,-,-, 741705 LTR ERVL 585 chrW 7312 13166 GGERV20_I-int 518 + 7312 13166 0 6 91,959,940,453,37,253, 0,255,1220,4884,5564,5601, +,+,+,+,+,+, 741707 LTR ERVL 585 chrW 9469 12195 CR1-C 854 + 9469 12195 0 2 1502,471, 0,2255, +,+, 741709 LINE CR1 585 chrW 21689 23057 GGERV20_I-int 642 + 21689 23057 0 2 1318,50, 0,1318, +,+, 741715 LTR ERVL 585 chrW 30101 31133 CR1-X 490 - 30101 31133 0 3 55,137,793, 0,102,239, -,-,-, 741725 LINE CR1 585 chrW 38720 45508 GGLTR7A 857 + 38720 45508 0 4 612,4285,1277,609, 0,612,4902,6179, +,+,+,+, 741735 LTR ERV1 585 chrW 47729 48877 CR1-Y4 625 - 47729 48877 0 2 168,347, 0,801, -,-, 741739 LINE CR1 585 chrW 48789 49129 CR1-D 534 + 48789 49129 0 2 268,72, 0,268, +,+, 741741 LINE CR1 585 chrW 49615 57869 GGLTR3C2 607 + 49615 57869 0 2 140,240, 0,8014, +,+, 741743 LTR ERVL 585 chrW 49751 57652 CR1-F 935 + 49751 57652 0 2 826,740, 0,7161, +,+, 741744 LINE CR1 585 chrW 50577 56912 GGLTR3F1 941 + 50577 56912 0 3 494,5346,494, 0,495,5841, +,+,+, 741745 LTR ERVL 585 chrW 58449 64335 GGLTR7-int 470 + 58449 64335 0 7 128,299,86,2017,260,656,840, 0,128,925,1013,3079,3864,5046, +,+,+,+,+,+,+, 741746 LTR ERV1 585 chrW 64738 67232 GGERVL-A-int 735 + 64738 67232 0 3 1613,662,51, 0,1781,2443, +,+,+, 741750 LTR ERVL 585 chrW 68569 69138 GGLTR8B 429 - 68569 69138 0 2 491,65, 0,504, -,-, 741754 LTR ERVL 585 chrW 77480 80293 CR1-D 785 - 77480 80293 0 3 43,1159,500, 0,567,2313, -,-,-, 741763 LINE CR1 585 chrW 80936 82838 GGERVL-B-int 794 - 80936 82838 0 2 1246,654, 0,1248, -,-, 741767 LTR ERVL 585 chrW 87094 96010 GGLTR3D 804 + 87094 96010 0 2 84,366, 0,8550, +,+, 741773 LTR ERVL 585 chrW 87179 95644 GGERV28_I-int 888 + 87179 95644 0 6 477,40,3817,406,294,477, 0,477,517,4829,7694,7988, +,+,+,+,+,+, 741774 LTR ERVK 585 chrW 93593 94445 GGLTR7-int 743 + 93593 94445 0 3 217,274,361, 0,217,491, +,+,+, 741777 LTR ERV1 585 chrW 96025 96882 GGERVL-B-int 718 + 96025 96882 0 2 297,560, 0,297, +,+, 741778 LTR ERVL 585 chrW 103346 105283 GGERVL-C-int 794 - 103346 105283 0 2 396,1541, 0,396, -,-, 741787 LTR ERVL 585 chrW 105283 107361 GGERVL-C-int 622 + 105283 107361 0 3 635,606,273, 0,640,1805, +,+,+, 741788 LTR ERVL 585 chrW 112301 113961 GGERVL-A-int 657 + 112301 113961 0 4 531,94,156,79, 0,531,1358,1581, +,+,+,+, 741791 LTR ERVL 585 chrW 113968 114949 GGERVL-A-int 827 + 113968 114949 0 2 97,884, 0,97, +,+, 741793 LTR ERVL 585 chrW 114966 126205 GGERVL-B-int 756 - 114966 126205 0 7 391,182,105,534,1945,1040,523, 0,5525,5707,5847,7731,9676,10716, -,-,-,-,-,-,-, 741794 LTR ERVL 585 chrW 115357 120466 GGLTR7A 851 - 115357 120466 0 2 589,4520, 0,589, -,-, 741795 LTR ERV1 585 chrW 126452 127697 GGERVL-C-int 386 + 126452 127697 0 2 133,242, 0,1003, +,+, 741800 LTR ERVL 586 chrW 131817 139295 GGERVL-C-int 690 - 131817 139295 0 2 104,362, 0,7116, -,-, 741807 LTR ERVL 586 chrW 131920 138930 CR1-F2 938 - 131920 138930 0 2 246,941, 0,6069, -,-, 741808 LINE CR1 586 chrW 132166 137989 GGERV10_LTR 943 - 132166 137989 0 3 220,5382,220, 0,220,5603, -,-,-, 741809 LTR ERVL 586 chrW 139600 140649 GGLTR3D 205 - 139600 140649 0 2 385,658, 0,391, -,-, 741811 LTR ERVL 586 chrW 145123 146708 GGERVL-A-int 816 - 145123 146708 0 2 454,570, 0,1015, -,-, 741817 LTR ERVL 586 chrW 147225 147944 GGLTR4A 713 + 147225 147944 0 2 240,100, 0,619, +,+, 741819 LTR ERVL 586 chrW 158669 160138 GGLTR5B 398 + 158669 160138 0 3 370,139,40, 0,402,1429, +,+,+, 741832 LTR ERVL 586 chrW 165321 166031 GGLTR3E1 718 - 165321 166031 0 2 391,165, 0,545, -,-, 741839 LTR ERVL 586 chrW 166911 167347 GGLTR3C1 425 - 166911 167347 0 2 251,173, 0,263, -,-, 741841 LTR ERVL 586 chrW 172987 175915 GGERVL-A-int 729 - 172987 175915 0 3 137,621,2156, 0,139,772, -,-,-, 741847 LTR ERVL 586 chrW 176827 189321 GGERVL-A-int 537 - 176827 189321 0 4 30,394,1407,246, 0,45,9305,12248, -,-,-,-, 741851 LTR ERVL 586 chrW 177391 179323 GGERVL-C-int 869 - 177391 179323 0 2 527,1405, 0,527, -,-, 741853 LTR ERVL 586 chrW 179323 186132 GGLTR7-int 795 + 179323 186132 0 5 543,2301,1874,1480,611, 0,543,2844,4718,6198, +,+,+,+,+, 741854 LTR ERV1 586 chrW 187538 189075 GGERVL-C-int 612 + 187538 189075 0 2 1044,493, 0,1044, +,+, 741855 LTR ERVL 586 chrW 189503 190286 GGERVL-A-int 271 - 189503 190286 0 2 217,510, 0,273, -,-, 741856 LTR ERVL 586 chrW 195602 197128 GGERVL-C-int 688 + 195602 197128 0 2 965,561, 0,965, +,+, 741862 LTR ERVL 586 chrW 203291 203566 GGERV10_LTR 469 + 203291 203566 0 2 20,158, 0,117, +,+, 741867 LTR ERVL 586 chrW 205363 206987 GGERVL-A-int 429 - 205363 206987 0 4 509,200,79,158, 0,986,1280,1466, -,-,-,-, 741874 LTR ERVL 586 chrW 206997 209313 GGLTR3C2 667 - 206997 209313 0 2 127,59, 0,2257, -,-, 741878 LTR ERVL 586 chrW 207134 209275 CR1-H 837 + 207134 209275 0 2 1585,420, 0,1721, +,+, 741879 LINE CR1 586 chrW 209314 210001 CR1-F2 652 + 209314 210001 0 2 56,303, 0,384, +,+, 741881 LINE CR1 586 chrW 230195 239554 CR1-D 516 + 230195 239554 0 2 186,51, 0,9308, +,+, 741898 LINE CR1 586 chrW 232666 235944 CR1-F2 897 - 232666 235944 0 2 126,2553, 0,725, -,-, 741901 LINE CR1 586 chrW 235939 236284 CR1-C3 786 + 235939 236284 0 2 154,188, 0,157, +,+, 741903 LINE CR1 586 chrW 239824 239919 (AT)n 372 + 239824 239919 0 2 19,28, 0,67, +,+, 741907 Simple_repeat Simple_repeat 587 chrW 293370 295341 GGERVL-B-int 275 + 293370 295341 0 2 75,151, 0,1820, +,+, 741914 LTR ERVL 587 chrW 293445 294876 GGERVL-A-int 482 + 293445 294876 0 3 93,410,925, 0,93,506, +,+,+, 741915 LTR ERVL 587 chrW 296989 297947 CR1-C2 747 + 296989 297947 0 2 803,87, 0,871, +,+, 741920 LINE CR1 587 chrW 297939 301138 CR1-D 786 + 297939 301138 0 2 1120,2079, 0,1120, +,+, 741923 LINE CR1 587 chrW 302395 302443 (TTTGCTT)n 498 + 302395 302443 0 2 12,7, 0,41, +,+, 741925 Simple_repeat Simple_repeat 587 chrW 305734 311537 GGLTR3F1 878 + 305734 311537 0 2 492,5309, 0,494, +,+, 741930 LTR ERVL 587 chrW 311537 311987 GGLTR3F1 890 + 311537 311987 0 2 36,414, 0,36, +,+, 741931 LTR ERVL 587 chrW 314599 317629 GGLTR3C2 626 + 314599 317629 0 3 308,127,116, 0,791,2914, +,+,+, 741933 LTR ERVL 587 chrW 315514 317508 CR1-F2 568 - 315514 317508 0 4 184,841,127,265, 0,239,1080,1729, -,-,-,-, 741935 LINE CR1 587 chrW 317787 322819 GGERVL-A-int 709 + 317787 322819 0 3 527,2135,2360, 0,527,2672, +,+,+, 741938 LTR ERVL 587 chrW 359548 364205 ENS1-LTR 942 + 359548 364205 0 3 919,2825,913, 0,919,3744, +,+,+, 741941 LTR ERVL 587 chrW 364205 369267 GGERVL-A-int 719 - 364205 369267 0 3 2680,1813,569, 0,2680,4493, -,-,-, 741942 LTR ERVL 587 chrW 369301 374538 GGERVL18-int 639 - 369301 374538 0 6 532,93,93,811,57,1280, 0,1385,2001,2518,3801,3957, -,-,-,-,-,-, 741943 LTR ERVL 587 chrW 375144 377001 GGLTR3F1 931 + 375144 377001 0 2 1363,494, 0,1363, +,+, 741950 LTR ERVL 587 chrW 377435 381901 CR1-C4 646 + 377435 381901 0 2 2579,88, 0,4378, +,+, 741953 LINE CR1 587 chrW 384465 390100 CR1-H 713 - 384465 390100 0 2 1875,2646, 0,2989, -,-, 741955 LINE CR1 587 chrW 390862 391891 GGERVK10-int 287 + 390862 391891 0 2 86,115, 0,914, +,+, 741957 LTR ERVK 588 chrW 398013 400131 GGERVL-A-int 671 + 398013 400131 0 2 463,1107, 0,1011, +,+, 741968 LTR ERVL 588 chrW 400131 400727 GGLTR3C2 660 - 400131 400727 0 2 220,42, 0,554, -,-, 741970 LTR ERVL 588 chrW 400729 402645 GGERVL-C-int 714 + 400729 402645 0 2 1396,520, 0,1396, +,+, 741972 LTR ERVL 588 chrW 457596 463792 GGERVL-A-int 648 + 457596 463792 0 5 214,1403,3915,45,571, 0,220,1623,5580,5625, +,+,+,+,+, 741980 LTR ERVL 588 chrW 463855 465780 GGERVL18-int 619 - 463855 465780 0 3 57,576,970, 0,61,955, -,-,-, 741982 LTR ERVL 588 chrW 465780 466921 GGERVL-C-int 595 - 465780 466921 0 2 540,601, 0,540, -,-, 741984 LTR ERVL 588 chrW 468356 471179 GGERVL-A-int 582 - 468356 471179 0 2 78,2397, 0,426, -,-, 741988 LTR ERVL 588 chrW 475211 480955 CR1-F2 502 + 475211 480955 0 2 913,486, 0,5258, +,+, 741995 LINE CR1 588 chrW 483049 487239 GGLTR7-int 581 + 483049 487239 0 3 90,1176,2921, 0,93,1269, +,+,+, 741997 LTR ERV1 588 chrW 487251 488584 GGLTR7-int 598 + 487251 488584 0 2 722,505, 0,828, +,+, 741998 LTR ERV1 588 chrW 489290 490593 GGERVL18-int 754 - 489290 490593 0 3 88,204,1011, 0,88,292, -,-,-, 742000 LTR ERVL 589 chrW 540784 544974 GGLTR7-int 581 + 540784 544974 0 3 90,1176,2921, 0,93,1269, +,+,+, 742001 LTR ERV1 589 chrW 544986 546319 GGLTR7-int 598 + 544986 546319 0 2 722,505, 0,828, +,+, 742002 LTR ERV1 589 chrW 547025 552584 GGERVL18-int 669 - 547025 552584 0 4 88,204,4970,287, 0,88,292,5272, -,-,-,-, 742004 LTR ERVL 589 chrW 552584 559327 GGERVL-A-int 716 + 552584 559327 0 5 1072,1759,3492,45,330, 0,1075,2834,6368,6413, +,+,+,+,+, 742005 LTR ERVL 589 chrW 560050 564238 GGERV28_I-int 227 + 560050 564238 0 4 64,737,376,1994, 0,435,1503,2194, +,+,+,+, 742006 LTR ERVK 589 chrW 564476 569241 GGLTR7A 813 + 564476 569241 0 6 217,216,609,48,339,609, 0,234,450,1059,1107,4156, +,+,+,+,+,+, 742007 LTR ERV1 589 chrW 567077 567231 GGLTR3B4 823 + 567077 567231 0 2 83,71, 0,83, +,+, 742009 LTR ERVL 589 chrW 573238 574037 GGERVL18-int 642 - 573238 574037 0 2 253,542, 0,257, -,-, 742015 LTR ERVL 589 chrW 574323 575528 GGLTR3B4 631 + 574323 575528 0 3 647,199,331, 0,647,874, +,+,+, 742017 LTR ERVL 589 chrW 575577 577388 GGLTR7-int 471 + 575577 577388 0 3 892,407,340, 0,892,1471, +,+,+, 742019 LTR ERV1 589 chrW 577388 586177 GGERVL18-int 496 + 577388 586177 0 3 211,585,327, 0,7877,8462, +,+,+, 742020 LTR ERVL 589 chrW 577623 582941 CR1-C 809 + 577623 582941 0 3 1574,558,79, 0,1574,5239, +,+,+, 742021 LINE CR1 589 chrW 579755 580100 GGLTR3F2 730 + 579755 580100 0 2 235,64, 0,281, +,+, 742022 LTR ERVL 589 chrW 580100 582864 GGLTR3F1 805 + 580100 582864 0 2 488,2273, 0,491, +,+, 742024 LTR ERVL 589 chrW 596249 598546 CR1-Y4 476 - 596249 598546 0 2 252,1596, 0,701, -,-, 742039 LINE CR1 589 chrW 602879 605567 GGERV10_LTR 811 + 602879 605567 0 3 2361,62,160, 0,2361,2528, +,+,+, 742046 LTR ERVL 589 chrW 609566 615480 GGLTR3A 837 + 609566 615480 0 2 526,5387, 0,527, +,+, 742051 LTR ERVL 589 chrW 615479 621365 GGERVL-A-int 688 + 615479 621365 0 7 241,525,2156,575,165,933,526, 0,241,778,2934,4261,4427,5360, +,+,+,+,+,+,+, 742052 LTR ERVL 589 chrW 625471 626515 GGLTR12C 628 + 625471 626515 0 2 123,261, 0,783, +,+, 742060 LTR ERVL 589 chrW 629110 649814 GGLTR11-int 355 + 629110 649814 0 3 82,128,879, 0,3298,19825, +,+,+, 742064 LTR ERV1 589 chrW 632537 636263 GGERV20_I-int 596 + 632537 636263 0 2 309,3413, 0,313, +,+, 742066 LTR ERVL 589 chrW 636296 639234 GGERV10_LTR 721 + 636296 639234 0 3 62,160,2610, 0,167,328, +,+,+, 742068 LTR ERVL 589 chrW 639425 648919 GGERV20_I-int 626 + 639425 648919 0 4 950,1427,123,309, 0,1839,9061,9185, +,+,+,+, 742070 LTR ERVL 589 chrW 642691 648489 GGERV10_LTR 877 - 642691 648489 0 3 222,5350,225, 0,222,5573, -,-,-, 742072 LTR ERVL 589 chrW 649814 650738 GGERVL18-int 554 + 649814 650738 0 3 299,208,398, 0,314,526, +,+,+, 742073 LTR ERVL 73 chrW 652195 657501 GGERVL18-int 569 + 652195 657501 0 5 448,99,231,1045,2299, 0,973,1072,1466,3007, +,+,+,+,+, 742076 LTR ERVL 590 chrW 672501 675012 GGERVL18-int 511 + 672501 675012 0 5 448,99,231,63,1045, 0,973,1072,1390,1466, +,+,+,+,+, 742091 LTR ERVL 590 chrW 675012 676462 GGERVL-A-int 618 + 675012 676462 0 3 496,261,510, 0,496,940, +,+,+, 742093 LTR ERVL 590 chrW 676461 678492 CR1-C 698 - 676461 678492 0 2 541,1166, 0,865, -,-, 742095 LINE CR1 590 chrW 678492 679025 GGLTR3F1 920 - 678492 679025 0 2 497,36, 0,497, -,-, 742096 LTR ERVL 590 chrW 679025 684812 GGLTR3F1 880 - 679025 684812 0 2 5289,497, 0,5290, -,-, 742097 LTR ERVL 590 chrW 684838 688307 GGERVL-A-int 670 + 684838 688307 0 3 564,1826,1079, 0,564,2390, +,+,+, 742098 LTR ERVL 590 chrW 688299 693247 CR1-H 557 - 688299 693247 0 3 4451,280,179, 0,4451,4769, -,-,-, 742099 LINE CR1 590 chrW 693249 696397 GGERVL-C-int 722 + 693249 696397 0 2 2512,636, 0,2512, +,+, 742100 LTR ERVL 590 chrW 699281 699966 GGERVL-A-int 392 + 699281 699966 0 2 238,336, 0,349, +,+, 742104 LTR ERVL 590 chrW 699966 701876 GGERVL-B-int 446 + 699966 701876 0 2 110,1341, 0,569, +,+, 742105 LTR ERVL 590 chrW 701875 702593 GGLTR3D 622 + 701875 702593 0 2 429,256, 0,462, +,+, 742108 LTR ERVL 590 chrW 702593 703469 GGERVL-B-int 781 - 702593 703469 0 2 567,309, 0,567, -,-, 742109 LTR ERVL 590 chrW 703464 708339 GGERVL-B-int 856 - 703464 708339 0 5 71,3240,584,313,81, 0,657,3897,4481,4794, -,-,-,-,-, 742110 LTR ERVL 590 chrW 708339 709794 CR1-D2 707 + 708339 709794 0 2 604,851, 0,604, +,+, 742112 LINE CR1 590 chrW 717126 729284 GGERV10_LTR 714 + 717126 729284 0 8 62,160,3458,204,1568,71,122,69, 0,164,325,3783,10265,11833,11967,12089, +,+,+,+,+,+,+,+, 742117 LTR ERVL 590 chrW 721131 727391 GGERVK1-int 978 + 721131 727391 0 5 91,241,5248,439,241, 0,91,332,5580,6019, +,+,+,+,+, 742118 LTR ERVK 590 chrW 730827 734113 GGERV20_I-int 331 + 730827 734113 0 2 768,2518, 0,768, +,+, 742121 LTR ERVL 590 chrW 734712 738647 GGERVL-A-int 705 + 734712 738647 0 3 506,1631,1798, 0,506,2137, +,+,+, 742122 LTR ERVL 590 chrW 740954 744122 GGERV28_I-int 254 + 740954 744122 0 2 524,150, 0,3018, +,+, 742123 LTR ERVK 590 chrW 746845 749800 GGERVL-B-int 836 - 746845 749800 0 2 2538,417, 0,2538, -,-, 742128 LTR ERVL 590 chrW 751483 753397 CR1-Y 573 - 751483 753397 0 2 1720,194, 0,1720, -,-, 742131 LINE CR1 590 chrW 754169 755603 GGERVL-B-int 720 + 754169 755603 0 2 558,876, 0,558, +,+, 742135 LTR ERVL 590 chrW 755769 759101 CR1-H 745 - 755769 759101 0 2 1678,1116, 0,2216, -,-, 742137 LINE CR1 590 chrW 759720 766435 GGLTR7-int 521 - 759720 766435 0 6 51,440,877,2391,490,199, 0,634,1079,3126,6026,6516, -,-,-,-,-,-, 742140 LTR ERV1 590 chrW 768222 772435 GGERV28_I-int 307 + 768222 772435 0 3 355,69,205, 0,1403,4008, +,+,+, 742142 LTR ERVK 590 chrW 772950 775070 CR1-C 863 - 772950 775070 0 2 678,1437, 0,683, -,-, 742143 LINE CR1 590 chrW 777355 780555 GGERV20_I-int 784 + 777355 780555 0 2 2907,279, 0,2921, +,+, 742147 LTR ERVL 590 chrW 782173 783654 GGLTR5B 663 - 782173 783654 0 3 152,59,80, 0,543,1401, -,-,-, 742152 LTR ERVL 73 chrW 785224 790346 GGERVL-C-int 742 - 785224 790346 0 3 574,1449,3099, 0,574,2023, -,-,-, 742157 LTR ERVL 591 chrW 790346 793767 CR1-C 830 + 790346 793767 0 2 425,1572, 0,1849, +,+, 742158 LINE CR1 591 chrW 790769 792195 GGERVL-B-int 671 - 790769 792195 0 2 880,546, 0,880, -,-, 742159 LTR ERVL 591 chrW 793788 800261 GGERV20_I-int 601 + 793788 800261 0 5 129,412,187,1889,170, 0,176,589,3858,6303, +,+,+,+,+, 742160 LTR ERVL 591 chrW 801833 804217 GGERVL18-int 499 + 801833 804217 0 2 533,1851, 0,533, +,+, 742165 LTR ERVL 591 chrW 804797 805269 GGERVL-B-int 310 + 804797 805269 0 2 142,284, 0,188, +,+, 742167 LTR ERVL 591 chrW 808644 812429 GGLTR3C1 598 + 808644 812429 0 2 3243,542, 0,3243, +,+, 742173 LTR ERVL 591 chrW 812607 813652 GGLTR3D 707 - 812607 813652 0 3 156,92,293, 0,633,752, -,-,-, 742175 LTR ERVL 591 chrW 813689 815903 GGERVL-B-int 474 - 813689 815903 0 2 291,108, 0,2106, -,-, 742178 LTR ERVL 591 chrW 815905 820384 GGLTR7-int 817 - 815905 820384 0 2 3750,567, 0,3912, -,-, 742180 LTR ERV1 591 chrW 820518 823278 GGERVL-A-int 671 + 820518 823278 0 3 501,1110,824, 0,501,1936, +,+,+, 742182 LTR ERVL 591 chrW 823235 824732 GGERVL-A-int 300 - 823235 824732 0 4 143,216,240,79, 0,257,606,1418, -,-,-,-, 742184 LTR ERVL 591 chrW 830609 831321 CR1-C2 854 + 830609 831321 0 2 62,62, 0,650, +,+, 742193 LINE CR1 591 chrW 834556 835242 Char12Mar1_GG 641 - 834556 835242 0 2 449,76, 0,610, -,-, 742199 DNA hAT-Charlie 591 chrW 842560 844673 GGLTR11-int 304 + 842560 844673 0 2 71,157, 0,1956, +,+, 742211 LTR ERV1 591 chrW 842657 844078 GGLTR3D 814 + 842657 844078 0 2 793,628, 0,793, +,+, 742212 LTR ERVL 591 chrW 848280 855392 GGERV20_I-int 493 + 848280 855392 0 2 278,630, 0,6482, +,+, 742216 LTR ERVL 591 chrW 848579 854762 GGERVK1-int 980 + 848579 854762 0 4 241,5262,439,241, 0,241,5503,5942, +,+,+,+, 742217 LTR ERVK 591 chrW 855380 863759 CR1-B 792 - 855380 863759 0 2 1361,1383, 0,6996, -,-, 742218 LINE CR1 591 chrW 856741 860810 GGERVL-A-int 719 + 856741 860810 0 4 833,804,839,1593, 0,833,1637,2476, +,+,+,+, 742219 LTR ERVL 591 chrW 863761 865114 GGERVL18-int 455 + 863761 865114 0 3 853,50,231, 0,1068,1122, +,+,+, 742221 LTR ERVL 591 chrW 870675 874204 CR1-D 748 + 870675 874204 0 2 57,1396, 0,2133, +,+, 742224 LINE CR1 591 chrW 870732 872808 GGERVL-B-int 780 + 870732 872808 0 6 497,263,551,233,230,207, 0,527,790,1372,1605,1869, +,+,+,+,+,+, 742225 LTR ERVL 591 chrW 874653 874920 GGLTR3C2 622 + 874653 874920 0 2 165,102, 0,165, +,+, 742227 LTR ERVL 591 chrW 876842 878128 GGERVL-A-int 182 - 876842 878128 0 2 531,413, 0,873, -,-, 742230 LTR ERVL 591 chrW 883728 895481 GGLTR3F1 855 + 883728 895481 0 6 62,156,1340,3134,36,494, 0,173,330,2278,11223,11259, +,+,+,+,+,+, 742241 LTR ERVL 591 chrW 889140 894951 GGLTR3F1 901 + 889140 894951 0 2 494,5316, 0,495, +,+, 742243 LTR ERVL 591 chrW 895481 896616 GGERV10_LTR 943 + 895481 896616 0 2 915,220, 0,915, +,+, 742244 LTR ERVL 591 chrW 896616 897757 GGERVL18-int 688 + 896616 897757 0 2 28,789, 0,352, +,+, 742245 LTR ERVL 591 chrW 897757 904003 GGERVL-B-int 779 + 897757 904003 0 4 503,1113,2061,1242, 0,503,2943,5004, +,+,+,+, 742247 LTR ERVL 591 chrW 898912 900595 GGERVL-A-int 746 + 898912 900595 0 2 1308,366, 0,1317, +,+, 742248 LTR ERVL 591 chrW 904003 908457 GGLTR3F1 704 + 904003 908457 0 4 491,3094,308,544, 0,493,3597,3910, +,+,+,+, 742250 LTR ERVL 591 chrW 909747 911372 CR1-F2 631 - 909747 911372 0 2 219,1087, 0,538, -,-, 742253 LINE CR1 592 chrW 919232 923015 GGERVL-A-int 763 + 919232 923015 0 3 527,1235,2021, 0,527,1762, +,+,+, 742263 LTR ERVL 592 chrW 923422 925813 GGLTR3B1 743 + 923422 925813 0 4 517,131,447,65, 0,882,1013,2326, +,+,+,+, 742265 LTR ERVL 592 chrW 925818 926221 GGLTR3B4 436 + 925818 926221 0 2 76,298, 0,105, +,+, 742268 LTR ERVL 592 chrW 926221 927201 GGERV20_I-int 248 - 926221 927201 0 2 513,454, 0,526, -,-, 742270 LTR ERVL 592 chrW 928190 938419 GGERVL-B-int 837 - 928190 938419 0 6 102,170,488,482,4819,483, 0,120,292,780,4925,9746, -,-,-,-,-,-, 742272 LTR ERVL 592 chrW 929449 933103 CR1-F 919 - 929449 933103 0 2 3527,127, 0,3527, -,-, 742273 LINE CR1 592 chrW 938922 939127 GGERVL-C-int 689 - 938922 939127 0 2 111,94, 0,111, -,-, 742276 LTR ERVL 592 chrW 944726 950552 GGERV10_LTR 900 + 944726 950552 0 3 220,5385,220, 0,221,5606, +,+,+, 742283 LTR ERVL 592 chrW 950608 955664 GGERV28_I-int 213 - 950608 955664 0 2 214,326, 0,4730, -,-, 742284 LTR ERVK 592 chrW 951500 954874 GGLTR10D 957 - 951500 954874 0 3 347,2680,347, 0,347,3027, -,-,-, 742286 LTR ERVK 592 chrW 957101 959543 GGLTR7-int 490 - 957101 959543 0 4 106,1468,233,249, 0,379,1960,2193, -,-,-,-, 742287 LTR ERV1 592 chrW 959543 961776 GGLTR7-int 440 - 959543 961776 0 3 313,937,187, 0,495,2046, -,-,-, 742288 LTR ERV1 592 chrW 961938 963768 GGLTR7-int 321 - 961938 963768 0 4 173,284,292,67, 0,479,1435,1763, -,-,-,-, 742291 LTR ERV1 592 chrW 971726 990462 GGLTR7-int 711 + 971726 990462 0 8 212,287,104,578,294,2869,312,377, 0,217,504,12363,13308,15178,18047,18359, +,+,+,+,+,+,+,+, 742302 LTR ERV1 592 chrW 972334 973563 GGERVL-C-int 859 - 972334 973563 0 2 527,702, 0,527, -,-, 742303 LTR ERVL 592 chrW 973620 974718 GGERVL-A-int 839 - 973620 974718 0 2 371,727, 0,371, -,-, 742305 LTR ERVL 592 chrW 975375 981651 GGLTR3A 832 + 975375 981651 0 5 527,4665,562,233,232, 0,527,5192,5754,6044, +,+,+,+,+, 742307 LTR ERVL 592 chrW 981767 984097 GGERVL-A-int 869 + 981767 984097 0 3 903,1006,421, 0,903,1909, +,+,+, 742310 LTR ERVL 592 chrW 993307 995300 GGLTR7-int 263 + 993307 995300 0 4 242,217,696,302, 0,424,754,1691, +,+,+,+, 742314 LTR ERV1 592 chrW 995326 995916 GGLTR11 686 + 995326 995916 0 2 62,490, 0,100, +,+, 742315 LTR ERV1 592 chrW 997177 997501 GGERV10_LTR 350 - 997177 997501 0 2 158,54, 0,270, -,-, 742319 LTR ERVL 592 chrW 1000000 1002202 GGLTR7-int 825 - 1000000 1002202 0 2 1473,567, 0,1635, -,-, 742322 LTR ERV1 592 chrW 1002336 1005109 GGERVL-A-int 677 + 1002336 1005109 0 3 501,1110,837, 0,501,1936, +,+,+, 742324 LTR ERVL 592 chrW 1005066 1006563 GGERVL-A-int 143 - 1005066 1006563 0 4 27,315,240,79, 0,158,606,1418, -,-,-,-, 742326 LTR ERVL 592 chrW 1012425 1013137 CR1-C2 854 + 1012425 1013137 0 2 62,62, 0,650, +,+, 742335 LINE CR1 592 chrW 1016372 1017058 Char12Mar1_GG 636 - 1016372 1017058 0 2 457,76, 0,610, -,-, 742341 DNA hAT-Charlie 592 chrW 1020699 1021414 GGLTR12C 319 + 1020699 1021414 0 2 109,190, 0,525, +,+, 742348 LTR ERVL 592 chrW 1024378 1026491 GGLTR11-int 288 + 1024378 1026491 0 3 71,169,157, 0,1756,1956, +,+,+, 742354 LTR ERV1 592 chrW 1024475 1025896 GGLTR3D 814 + 1024475 1025896 0 2 793,628, 0,793, +,+, 742355 LTR ERVL 592 chrW 1028067 1042619 GGERVL18-int 608 + 1028067 1042619 0 5 931,911,106,215,1909, 0,11387,12298,12420,12643, +,+,+,+,+, 742357 LTR ERVL 592 chrW 1030090 1036167 GGERVL18-int 473 + 1030090 1036167 0 4 923,836,50,214, 0,4762,5813,5863, +,+,+,+, 742359 LTR ERVL 592 chrW 1031001 1034850 CR1-B 800 - 1031001 1034850 0 2 1361,2031, 0,1818, -,-, 742360 LINE CR1 592 chrW 1036182 1039216 CR1-D 804 + 1036182 1039216 0 2 464,629, 0,2405, +,+, 742362 LINE CR1 9 chrW 1043942 1050424 GGERVL-C-int 725 - 1043942 1050424 0 2 128,2360, 0,4122, -,-, 742367 LTR ERVL 592 chrW 1044393 1048064 GGLTR3F2 751 + 1044393 1048064 0 2 79,71, 0,3600, +,+, 742369 LTR ERVL 593 chrW 1050439 1053428 GGERV28_I-int 193 + 1050439 1053428 0 3 784,286,86, 0,1971,2903, +,+,+, 742372 LTR ERVK 593 chrW 1055008 1056030 GGERVL-B-int 490 - 1055008 1056030 0 2 477,545, 0,477, -,-, 742374 LTR ERVL 593 chrW 1059258 1068525 GGLTR11 851 - 1059258 1068525 0 3 407,133,2389, 0,6745,6878, -,-,-, 742377 LTR ERV1 593 chrW 1059665 1065473 GGLTR3F1 901 + 1059665 1065473 0 2 494,5313, 0,495, +,+, 742378 LTR ERVL 593 chrW 1065473 1066003 GGLTR3F1 936 + 1065473 1066003 0 2 36,494, 0,36, +,+, 742379 LTR ERVL 593 chrW 1068522 1069985 CR1-G 376 - 1068522 1069985 0 3 618,97,157, 0,1173,1306, -,-,-, 742380 LINE CR1 593 chrW 1071581 1075087 GGERV20_I-int 623 + 1071581 1075087 0 6 14,146,538,603,83,246, 0,144,291,1605,2449,3260, +,+,+,+,+,+, 742383 LTR ERVL 593 chrW 1078240 1081344 GGLTR11-int 735 - 1078240 1081344 0 3 575,239,2234, 0,580,870, -,-,-, 742392 LTR ERV1 593 chrW 1081758 1084233 GGLTR7-int 425 + 1081758 1084233 0 6 109,254,273,105,130,59, 0,115,1690,1971,2076,2416, +,+,+,+,+,+, 742394 LTR ERV1 593 chrW 1084478 1088557 GGERVL-B-int 776 + 1084478 1088557 0 2 1139,478, 0,3601, +,+, 742397 LTR ERVL 593 chrW 1088572 1094558 GGERVL-B-int 821 + 1088572 1094558 0 2 287,3339, 0,2647, +,+, 742403 LTR ERVL 593 chrW 1088858 1091214 CR1-H2 897 - 1088858 1091214 0 2 135,1377, 0,979, -,-, 742404 LINE CR1 593 chrW 1105050 1108692 GGERV28_I-int 147 + 1105050 1108692 0 3 518,376,1994, 0,957,1648, +,+,+, 742408 LTR ERVK 593 chrW 1108930 1116679 GGLTR7-int 665 + 1108930 1116679 0 4 213,265,350,152, 0,235,500,7597, +,+,+,+, 742409 LTR ERV1 593 chrW 1112283 1113175 GGLTR3A 906 - 1112283 1113175 0 2 146,78, 0,814, -,-, 742411 LTR ERVL 593 chrW 1112437 1113102 GGLTR3A 798 + 1112437 1113102 0 2 86,82, 0,583, +,+, 742412 LTR ERVL 593 chrW 1113664 1114904 GGLTR3B1 781 + 1113664 1114904 0 2 715,525, 0,715, +,+, 742415 LTR ERVL 593 chrW 1120931 1122114 GGLTR4A 808 + 1120931 1122114 0 2 126,220, 0,963, +,+, 742422 LTR ERVL 593 chrW 1121057 1121894 GGLTR11 691 - 1121057 1121894 0 2 152,401, 0,436, -,-, 742423 LTR ERV1 593 chrW 1124285 1125593 GGLTR3E1 816 - 1124285 1125593 0 3 1139,28,139, 0,1141,1169, -,-,-, 742427 LTR ERVL 593 chrW 1125669 1128144 GGLTR7-int 432 - 1125669 1128144 0 5 59,105,273,254,109, 0,399,512,2106,2366, -,-,-,-,-, 742428 LTR ERV1 593 chrW 1128558 1131662 GGLTR11-int 733 + 1128558 1131662 0 3 2234,239,575, 0,2285,2529, +,+,+, 742431 LTR ERV1 593 chrW 1134815 1138372 GGERV20_I-int 628 - 1134815 1138372 0 6 246,83,603,538,157,65, 0,974,1298,2677,3216,3492, -,-,-,-,-,-, 742437 LTR ERVL 593 chrW 1139917 1141380 CR1-G 373 + 1139917 1141380 0 3 157,97,618, 0,193,845, +,+,+, 742443 LINE CR1 593 chrW 1141377 1143898 GGLTR11 844 + 1141377 1143898 0 2 2405,116, 0,2405, +,+, 742444 LTR ERV1 593 chrW 1143898 1144428 GGLTR3F1 936 - 1143898 1144428 0 2 494,36, 0,494, -,-, 742445 LTR ERVL 593 chrW 1144428 1150201 GGLTR3F1 869 - 1144428 1150201 0 2 5305,467, 0,5306, -,-, 742446 LTR ERVL 594 chrW 1191755 1192589 GGLTR7-int 789 - 1191755 1192589 0 3 340,260,212, 0,340,622, -,-,-, 742449 LTR ERV1 594 chrW 1192968 1193321 GGERVK10-int 323 - 1192968 1193321 0 2 66,131, 0,222, -,-, 742450 LTR ERVK 594 chrW 1196729 1206420 GGLTR3F1 867 - 1196729 1206420 0 4 492,2842,2495,492, 0,492,6702,9199, -,-,-,-, 742453 LTR ERVL 594 chrW 1200063 1203431 GGLTR10D 965 - 1200063 1203431 0 3 347,2674,347, 0,347,3021, -,-,-, 742454 LTR ERVK 594 chrW 1206420 1208146 GGERV10_LTR 887 + 1206420 1208146 0 3 1402,62,159, 0,1402,1567, +,+,+, 742455 LTR ERVL 594 chrW 1208146 1221930 GGERVL18-int 699 + 1208146 1221930 0 5 1574,1096,1880,322,327, 0,8714,10744,13135,13457, +,+,+,+,+, 742456 LTR ERVL 594 chrW 1209720 1215256 GGERVL-A-int 739 + 1209720 1215256 0 4 491,2403,110,1159, 0,491,3794,4377, +,+,+,+, 742457 LTR ERVL 594 chrW 1222278 1222522 CR1-B2 714 + 1222278 1222522 0 2 141,103, 0,141, +,+, 742467 LINE CR1 594 chrW 1223122 1226572 GGERVL-A-int 455 + 1223122 1226572 0 3 545,185,1080, 0,545,2370, +,+,+, 742470 LTR ERVL 594 chrW 1223852 1225492 GGLTR7A 857 + 1223852 1225492 0 3 608,959,73, 0,608,1567, +,+,+, 742471 LTR ERV1 594 chrW 1226860 1228769 CR1-F 740 + 1226860 1228769 0 2 335,1046, 0,863, +,+, 742473 LINE CR1 594 chrW 1228767 1230456 GGLTR7-int 884 + 1228767 1230456 0 2 307,1024, 0,665, +,+, 742475 LTR ERV1 594 chrW 1230456 1231397 GGERV28_I-int 705 + 1230456 1231397 0 3 477,37,425, 0,479,516, +,+,+, 742476 LTR ERVK 594 chrW 1232332 1235102 GGERV28_I-int 563 + 1232332 1235102 0 4 131,66,268,477, 0,287,2025,2293, +,+,+,+, 742478 LTR ERVK 594 chrW 1233064 1233899 GGLTR7-int 759 + 1233064 1233899 0 3 217,278,340, 0,217,495, +,+,+, 742479 LTR ERV1 594 chrW 1237822 1238357 GGLTR7B 670 + 1237822 1238357 0 2 359,176, 0,359, +,+, 742489 LTR ERV1 594 chrW 1238357 1241740 GGERVK10-int 892 - 1238357 1241740 0 2 363,3020, 0,363, -,-, 742490 LTR ERVK 594 chrW 1242234 1246536 GGERV10_LTR 815 - 1242234 1246536 0 3 3977,159,80, 0,3978,4222, -,-,-, 742492 LTR ERVL 594 chrW 1246535 1247256 GGERVL18-LTR 540 - 1246535 1247256 0 2 301,346, 0,375, -,-, 742493 LTR ERVL 594 chrW 1249426 1250571 GGLTR3E1 863 - 1249426 1250571 0 2 326,264, 0,881, -,-, 742500 LTR ERVL 594 chrW 1250947 1254921 CR1-C3 661 + 1250947 1254921 0 2 344,191, 0,3783, +,+, 742503 LINE CR1 594 chrW 1251291 1254494 GGERVL-A-int 707 - 1251291 1254494 0 3 568,45,2548, 0,568,655, -,-,-, 742504 LTR ERVL 594 chrW 1255430 1257276 GGERVL18-int 455 - 1255430 1257276 0 2 1338,156, 0,1690, -,-, 742506 LTR ERVL 594 chrW 1256770 1257120 GGLTR12C 662 - 1256770 1257120 0 2 313,37, 0,313, -,-, 742507 LTR ERVL 594 chrW 1259571 1259878 (CATTT)n 490 + 1259571 1259878 0 2 175,120, 0,187, +,+, 742516 Simple_repeat Simple_repeat 594 chrW 1260860 1265003 CR1-B2 910 - 1260860 1265003 0 2 286,458, 0,3685, -,-, 742521 LINE CR1 594 chrW 1261374 1264530 GGERV10_LTR 985 + 1261374 1264530 0 2 2936,220, 0,2936, +,+, 742523 LTR ERVL 594 chrW 1265507 1267335 GGERV28_I-int 922 - 1265507 1267335 0 2 961,489, 0,1339, -,-, 742524 LTR ERVK 594 chrW 1267736 1269518 GGLTR7-int 143 - 1267736 1269518 0 2 888,257, 0,1525, -,-, 742527 LTR ERV1 594 chrW 1272429 1277297 GGERVL-B-int 846 - 1272429 1277297 0 2 586,4282, 0,586, -,-, 742530 LTR ERVL 594 chrW 1277823 1287905 GGERV28_I-int 236 - 1277823 1287905 0 5 72,80,137,557,573, 0,1393,1576,7948,9509, -,-,-,-,-, 742531 LTR ERVK 594 chrW 1280909 1282504 GGLTR7-int 614 - 1280909 1282504 0 6 289,54,134,66,157,601, 0,541,620,771,837,994, -,-,-,-,-,-, 742534 LTR ERV1 594 chrW 1282504 1284881 GGERVL-C-int 786 + 1282504 1284881 0 4 397,235,796,486, 0,860,1095,1891, +,+,+,+, 742535 LTR ERVL 594 chrW 1290241 1291101 GGLTR7A 780 - 1290241 1291101 0 4 340,260,196,42, 0,340,622,818, -,-,-,-, 742539 LTR ERV1 594 chrW 1297187 1298916 GGERVL-B-int 690 - 1297187 1298916 0 3 272,825,579, 0,325,1150, -,-,-, 742543 LTR ERVL 594 chrW 1300829 1309854 GGERV28_I-int 250 + 1300829 1309854 0 3 376,149,1827, 0,691,7198, +,+,+, 742545 LTR ERVK 594 chrW 1301688 1307496 GGLTR3F1 897 + 1301688 1307496 0 2 491,5316, 0,492, +,+, 742546 LTR ERVL 594 chrW 1307496 1308023 GGLTR3F1 930 + 1307496 1308023 0 2 36,491, 0,36, +,+, 742547 LTR ERVL 74 chrW 1310092 1310952 GGLTR7A 780 + 1310092 1310952 0 4 42,196,260,340, 0,42,260,520, +,+,+,+, 742548 LTR ERV1 595 chrW 1313288 1323370 GGERV28_I-int 253 + 1313288 1323370 0 5 573,557,159,94,599, 0,1577,8369,8595,9483, +,+,+,+,+, 742550 LTR ERVK 595 chrW 1316312 1318689 GGERVL-C-int 787 - 1316312 1318689 0 4 486,796,235,397, 0,486,1282,1980, -,-,-,-, 742552 LTR ERVL 595 chrW 1318689 1320284 GGLTR7-int 613 + 1318689 1320284 0 6 601,173,50,134,54,289, 0,601,774,841,1000,1306, +,+,+,+,+,+, 742554 LTR ERV1 595 chrW 1332300 1337992 GGERVL-A-int 608 - 1332300 1337992 0 5 275,45,2548,1338,156, 0,275,362,3846,5536, -,-,-,-,-, 742559 LTR ERVL 595 chrW 1337486 1337836 GGLTR12C 662 - 1337486 1337836 0 2 313,37, 0,313, -,-, 742562 LTR ERVL 595 chrW 1340287 1340594 (CATTT)n 490 + 1340287 1340594 0 2 175,120, 0,187, +,+, 742571 Simple_repeat Simple_repeat 595 chrW 1341576 1345719 CR1-B2 910 - 1341576 1345719 0 2 286,458, 0,3685, -,-, 742576 LINE CR1 595 chrW 1342090 1345246 GGERV10_LTR 985 + 1342090 1345246 0 2 2936,220, 0,2936, +,+, 742578 LTR ERVL 595 chrW 1346223 1348051 GGERV28_I-int 922 - 1346223 1348051 0 2 961,489, 0,1339, -,-, 742579 LTR ERVK 595 chrW 1348452 1350234 GGLTR7-int 157 - 1348452 1350234 0 2 806,257, 0,1525, -,-, 742582 LTR ERV1 595 chrW 1353145 1358010 GGERVL-B-int 842 - 1353145 1358010 0 2 583,4282, 0,583, -,-, 742585 LTR ERVL 595 chrW 1358536 1368618 GGERV28_I-int 254 - 1358536 1368618 0 5 599,94,159,557,573, 0,1393,1554,7948,9509, -,-,-,-,-, 742586 LTR ERVK 595 chrW 1361622 1363217 GGLTR7-int 614 - 1361622 1363217 0 6 289,54,134,66,157,601, 0,541,620,771,837,994, -,-,-,-,-,-, 742588 LTR ERV1 595 chrW 1363217 1365594 GGERVL-C-int 787 + 1363217 1365594 0 4 397,235,796,486, 0,860,1095,1891, +,+,+,+, 742589 LTR ERVL 595 chrW 1370954 1371814 GGLTR7A 780 - 1370954 1371814 0 4 340,260,196,42, 0,340,622,818, -,-,-,-, 742593 LTR ERV1 595 chrW 1372052 1376329 GGERV28_I-int 202 - 1372052 1376329 0 4 910,605,376,297, 0,2356,3276,3980, -,-,-,-, 742594 LTR ERVK 595 chrW 1379326 1385610 GGLTR3F1 870 + 1379326 1385610 0 3 494,5295,494, 0,495,5790, +,+,+, 742598 LTR ERVL 595 chrW 1388942 1389802 GGLTR7A 780 + 1388942 1389802 0 4 42,196,260,340, 0,42,260,520, +,+,+,+, 742601 LTR ERV1 595 chrW 1392138 1402220 GGERV28_I-int 236 + 1392138 1402220 0 5 573,557,137,80,599, 0,1577,8369,8609,9483, +,+,+,+,+, 742603 LTR ERVK 595 chrW 1395162 1397539 GGERVL-C-int 786 - 1395162 1397539 0 4 486,796,235,397, 0,486,1282,1980, -,-,-,-, 742605 LTR ERVL 595 chrW 1397539 1399134 GGLTR7-int 614 + 1397539 1399134 0 6 601,173,50,134,54,289, 0,601,774,841,1000,1306, +,+,+,+,+,+, 742607 LTR ERV1 595 chrW 1409591 1416576 GGLTR7-int 497 + 1409591 1416576 0 2 366,304, 0,6681, +,+, 742614 LTR ERV1 595 chrW 1410339 1415939 GGERVL-A-int 802 + 1410339 1415939 0 4 3919,1074,47,524, 0,3919,5029,5076, +,+,+,+, 742615 LTR ERVL 595 chrW 1421525 1424030 GGLTR7A 861 + 1421525 1424030 0 2 1907,597, 0,1908, +,+, 742617 LTR ERV1 595 chrW 1424030 1425734 GGERVL-A-int 769 - 1424030 1425734 0 2 789,259, 0,1445, -,-, 742618 LTR ERVL 595 chrW 1424819 1425473 GGERVL-A-int 873 - 1424819 1425473 0 2 486,168, 0,486, -,-, 742619 LTR ERVL 595 chrW 1428498 1429403 GGLTR12C 615 - 1428498 1429403 0 2 214,674, 0,231, -,-, 742623 LTR ERVL 595 chrW 1430642 1431124 GGERVL-B-int 717 + 1430642 1431124 0 2 394,88, 0,394, +,+, 742626 LTR ERVL 595 chrW 1431130 1440589 GGERVL-B-int 766 - 1431130 1440589 0 4 650,299,568,541, 0,8051,8350,8918, -,-,-,-, 742627 LTR ERVL 595 chrW 1431780 1436031 GGLTR7A 844 - 1431780 1436031 0 2 610,3641, 0,610, -,-, 742628 LTR ERV1 595 chrW 1436033 1439181 GGLTR3F2 752 + 1436033 1439181 0 3 2658,230,209, 0,2658,2939, +,+,+, 742629 LTR ERVL 596 chrW 1447784 1451385 CR1-C2 685 - 1447784 1451385 0 3 901,1925,421, 0,901,3180, -,-,-, 742634 LINE CR1 596 chrW 1454911 1456576 GGLTR7-int 561 - 1454911 1456576 0 4 597,87,400,209, 0,600,687,1456, -,-,-,-, 742641 LTR ERV1 596 chrW 1456575 1462680 GGLTR7A 868 - 1456575 1462680 0 2 5496,609, 0,5496, -,-, 742643 LTR ERV1 596 chrW 1467792 1470348 CR1-C 849 + 1467792 1470348 0 2 476,1723, 0,833, +,+, 742645 LINE CR1 596 chrW 1481613 1484192 GGERVL-B-int 780 - 1481613 1484192 0 4 1328,172,446,75, 0,1884,2056,2504, -,-,-,-, 742657 LTR ERVL 596 chrW 1484167 1484822 GGERVL-C-int 749 + 1484167 1484822 0 2 580,75, 0,580, +,+, 742659 LTR ERVL 596 chrW 1484852 1489467 GGERVL-A-int 639 - 1484852 1489467 0 3 2231,1524,498, 0,2593,4117, -,-,-, 742661 LTR ERVL 596 chrW 1495197 1495857 GGERVL18-int 463 + 1495197 1495857 0 2 332,328, 0,332, +,+, 742666 LTR ERVL 596 chrW 1496922 1500000 GGERVL18-int 563 + 1496922 1500000 0 2 279,2783, 0,295, +,+, 742669 LTR ERVL 596 chrW 1500000 1506596 GGERVL18-int 816 + 1500000 1506596 0 3 753,617,482, 0,5018,6114, +,+,+, 742670 LTR ERVL 596 chrW 1506594 1509924 GGERV10_LTR 724 - 1506594 1509924 0 4 1323,1685,156,74, 0,1323,3011,3256, -,-,-,-, 742673 LTR ERVL 596 chrW 1512869 1514421 CR1-C4 608 + 1512869 1514421 0 2 233,1014, 0,538, +,+, 742675 LINE CR1 596 chrW 1515081 1516171 CR1-F2 875 - 1515081 1516171 0 2 74,1015, 0,75, -,-, 742677 LINE CR1 596 chrW 1520600 1522072 GGLTR3F1 910 - 1520600 1522072 0 2 491,980, 0,492, -,-, 742680 LTR ERVL 596 chrW 1524420 1525806 CR1-F2 600 + 1524420 1525806 0 2 1033,352, 0,1034, +,+, 742683 LINE CR1 596 chrW 1527543 1534114 GGLTR3A 828 - 1527543 1534114 0 4 528,2353,2917,176, 0,529,3470,6395, -,-,-,-, 742687 LTR ERVL 596 chrW 1536845 1542670 GGERV10_LTR 955 - 1536845 1542670 0 3 220,5385,219, 0,220,5606, -,-,-, 742692 LTR ERVL 596 chrW 1543163 1546723 GGERVL18-int 403 - 1543163 1546723 0 4 1735,228,1102,217, 0,1738,1966,3343, -,-,-,-, 742694 LTR ERVL 596 chrW 1549873 1561471 GGLTR7-int 282 - 1549873 1561471 0 8 341,2278,222,468,1290,285,276,304, 0,510,2987,3250,4086,6580,11016,11294, -,-,-,-,-,-,-,-, 742701 LTR ERV1 596 chrW 1557218 1560851 CR1-H 801 - 1557218 1560851 0 2 1757,1349, 0,2284, -,-, 742702 LINE CR1 596 chrW 1561799 1563348 CR1-H 763 - 1561799 1563348 0 3 42,137,1043, 0,42,506, -,-,-, 742705 LINE CR1 596 chrW 1567084 1568378 GGLTR11-int 475 - 1567084 1568378 0 2 151,292, 0,1002, -,-, 742708 LTR ERV1 74 chrW 1568491 1573061 GGERVL-A-int 862 - 1568491 1573061 0 5 527,47,3193,234,527, 0,527,616,3809,4043, -,-,-,-,-, 742710 LTR ERVL 597 chrW 1574970 1577038 GGERVL-A-int 708 - 1574970 1577038 0 2 54,1977, 0,91, -,-, 742714 LTR ERVL 597 chrW 1579617 1581745 GGLTR3B4 615 + 1579617 1581745 0 2 534,1594, 0,534, +,+, 742716 LTR ERVL 597 chrW 1583192 1585951 GGLTR3F2 695 + 1583192 1585951 0 3 236,212,2253, 0,292,506, +,+,+, 742718 LTR ERVL 597 chrW 1590644 1592833 CR1-Y4 689 - 1590644 1592833 0 3 1205,329,399, 0,1461,1790, -,-,-, 742727 LINE CR1 597 chrW 1601891 1605453 GGLTR3B1 746 - 1601891 1605453 0 2 496,3066, 0,496, -,-, 742732 LTR ERVL 597 chrW 1606245 1614690 GGERVL-A-int 706 - 1606245 1614690 0 2 1346,359, 0,8086, -,-, 742734 LTR ERVL 597 chrW 1607591 1614331 GGLTR3A 879 + 1607591 1614331 0 3 528,5684,527, 0,529,6213, +,+,+, 742735 LTR ERVL 597 chrW 1621950 1624078 GGLTR3B4 614 + 1621950 1624078 0 2 534,1594, 0,534, +,+, 742743 LTR ERVL 597 chrW 1625525 1629700 GGLTR3F2 678 + 1625525 1629700 0 3 236,30,237, 0,3876,3938, +,+,+, 742745 LTR ERVL 597 chrW 1625817 1629405 GGERVL-B-int 735 + 1625817 1629405 0 2 212,3374, 0,214, +,+, 742747 LTR ERVL 597 chrW 1636779 1638650 GGLTR9 483 - 1636779 1638650 0 2 43,267, 0,1604, -,-, 742750 LTR ERVL 597 chrW 1638880 1641504 GGERVL18-int 681 - 1638880 1641504 0 2 153,2470, 0,154, -,-, 742752 LTR ERVL 597 chrW 1641723 1647156 GGERVL18-int 742 - 1641723 1647156 0 3 505,1861,317, 0,3255,5116, -,-,-, 742754 LTR ERVL 597 chrW 1642183 1644977 GGERVL-B-int 751 - 1642183 1644977 0 4 1734,87,225,223, 0,2217,2306,2571, -,-,-,-, 742755 LTR ERVL 597 chrW 1648076 1653050 GGLTR7-int 298 - 1648076 1653050 0 8 103,278,813,524,367,256,263,152, 0,719,1299,2243,3285,3652,4526,4822, -,-,-,-,-,-,-,-, 742759 LTR ERV1 597 chrW 1653886 1656718 GGLTR7-int 526 + 1653886 1656718 0 3 324,465,1592, 0,326,1240, +,+,+, 742761 LTR ERV1 597 chrW 1657965 1661621 GGERV28_I-int 151 + 1657965 1661621 0 3 692,376,1994, 0,974,1662, +,+,+, 742762 LTR ERVK 597 chrW 1661859 1669711 GGLTR7-int 679 + 1661859 1669711 0 10 42,195,263,343,541,121,68,309,133,274, 0,42,259,522,1774,2673,6180,6248,7318,7578, +,+,+,+,+,+,+,+,+,+, 742763 LTR ERV1 597 chrW 1664653 1668022 GGLTR10D 949 - 1664653 1668022 0 3 347,2675,347, 0,347,3022, -,-,-, 742764 LTR ERVK 597 chrW 1669945 1670277 GGLTR7B 446 - 1669945 1670277 0 2 226,104, 0,228, -,-, 742766 LTR ERV1 597 chrW 1670881 1671821 GGLTR3E1 681 + 1670881 1671821 0 2 153,185, 0,755, +,+, 742768 LTR ERVL 597 chrW 1672116 1677219 CR1-C 812 + 1672116 1677219 0 4 244,210,888,75, 0,2147,3335,5028, +,+,+,+, 742771 LINE CR1 597 chrW 1674495 1675451 GGLTR7A 861 - 1674495 1675451 0 2 81,529, 0,427, -,-, 742774 LTR ERV1 597 chrW 1677487 1681736 GGLTR7-int 446 - 1677487 1681736 0 4 280,808,384,199, 0,2705,3580,4050, -,-,-,-, 742778 LTR ERV1 597 chrW 1689086 1701521 GGERVL-B-int 745 + 1689086 1701521 0 4 548,1780,255,1710, 0,548,9838,10725, +,+,+,+, 742786 LTR ERVL 597 chrW 1691415 1698924 GGLTR7A 829 - 1691415 1698924 0 4 599,3827,328,599, 0,600,6582,6910, -,-,-,-, 742787 LTR ERV1 74 chrW 1702015 1705249 CR1-D 802 + 1702015 1705249 0 2 615,1585, 0,1649, +,+, 742792 LINE CR1 598 chrW 1715238 1718165 GGLTR10C1 521 - 1715238 1718165 0 2 316,2611, 0,316, -,-, 742803 LTR ERVK 598 chrW 1777869 1782568 CR1-C3 614 + 1777869 1782568 0 2 447,1315, 0,3384, +,+, 742812 LINE CR1 598 chrW 1778330 1778502 GGERV21_LTR 543 - 1778330 1778502 0 2 90,56, 0,116, -,-, 742813 LTR ERVL 598 chrW 1778503 1780789 GGERV20_I-int 564 - 1778503 1780789 0 2 885,609, 0,1677, -,-, 742814 LTR ERVL 598 chrW 1779388 1780185 GGLTR3C2 554 + 1779388 1780185 0 2 438,77, 0,720, +,+, 742815 LTR ERVL 598 chrW 1789045 1790038 CR1-Y2 775 - 1789045 1790038 0 2 283,405, 0,588, -,-, 742819 LINE CR1 598 chrW 1791570 1807065 CR1-Y4 494 - 1791570 1807065 0 3 725,219,3579, 0,10800,11916, -,-,-, 742821 LINE CR1 598 chrW 1792298 1802370 GGLTR7-int 848 - 1792298 1802370 0 5 610,2307,2183,1709,610, 0,610,5570,7753,9462, -,-,-,-,-, 742822 LTR ERV1 598 chrW 1795215 1797727 GGERVL-C-int 891 - 1795215 1797727 0 2 527,1985, 0,527, -,-, 742823 LTR ERVL 598 chrW 1813080 1813403 GGERV10_LTR 678 + 1813080 1813403 0 2 62,159, 0,164, +,+, 742833 LTR ERVL 598 chrW 1813936 1820220 GGLTR3F2 718 - 1813936 1820220 0 2 419,38, 0,6246, -,-, 742836 LTR ERVL 598 chrW 1814354 1820182 GGERV10_LTR 979 + 1814354 1820182 0 3 221,5386,220, 0,222,5608, +,+,+, 742837 LTR ERVL 598 chrW 1821144 1821768 GGERVK1-int 425 + 1821144 1821768 0 2 80,59, 0,565, +,+, 742838 LTR ERVK 598 chrW 1823388 1830623 GGERVL18-int 720 - 1823388 1830623 0 6 787,1310,516,1839,96,256, 0,2621,3931,4455,6298,6979, -,-,-,-,-,-, 742843 LTR ERVL 598 chrW 1830623 1831489 GGERV20_I-int 678 + 1830623 1831489 0 2 122,115, 0,751, +,+, 742846 LTR ERVL 598 chrW 1831489 1832193 GGLTR3F2 783 + 1831489 1832193 0 3 236,224,204, 0,274,500, +,+,+, 742848 LTR ERVL 74 chrW 1832593 1841743 GGERVL-B-int 743 + 1832593 1841743 0 3 1678,3469,524, 0,5124,8626, +,+,+, 742851 LTR ERVL 74 chrW 1834274 1837717 GGLTR10C2 881 + 1834274 1837717 0 3 362,2716,365, 0,362,3078, +,+,+, 742852 LTR ERVK 599 chrW 1848913 1849906 CR1-Y2 772 - 1848913 1849906 0 2 283,405, 0,588, -,-, 742859 LINE CR1 599 chrW 1852166 1855777 GGLTR7A 866 - 1852166 1855777 0 2 610,3001, 0,610, -,-, 742862 LTR ERV1 599 chrW 1855769 1862182 GGERVL-A-int 844 - 1855769 1862182 0 5 500,47,5017,236,544, 0,500,589,5633,5869, -,-,-,-,-, 742863 LTR ERVL 599 chrW 1863173 1863954 GGLTR3A 739 - 1863173 1863954 0 2 215,565, 0,216, -,-, 742867 LTR ERVL 599 chrW 1864566 1867518 GGERV10_LTR 866 + 1864566 1867518 0 3 2626,62,160, 0,2626,2792, +,+,+, 742869 LTR ERVL 599 chrW 1867616 1868477 GGERVL-C-int 628 - 1867616 1868477 0 2 124,737, 0,124, -,-, 742870 LTR ERVL 599 chrW 1868477 1868976 GGLTR3F1 787 - 1868477 1868976 0 2 463,36, 0,463, -,-, 742871 LTR ERVL 599 chrW 1868976 1873648 GGERVL-B-int 769 - 1868976 1873648 0 3 3616,562,492, 0,3616,4180, -,-,-, 742872 LTR ERVL 599 chrW 1873786 1875019 GGLTR7-int 335 + 1873786 1875019 0 3 235,280,126, 0,401,1107, +,+,+, 742873 LTR ERV1 599 chrW 1875857 1880146 GGERVL18-int 747 + 1875857 1880146 0 5 1787,47,1169,590,292, 0,1812,1862,3407,3997, +,+,+,+,+, 742877 LTR ERVL 599 chrW 1880833 1882169 GGERVL18-int 327 + 1880833 1882169 0 2 166,850, 0,486, +,+, 742880 LTR ERVL 599 chrW 1882743 1883956 GGERVL18-LTR 703 - 1882743 1883956 0 2 870,343, 0,870, -,-, 742883 LTR ERVL 599 chrW 1884682 1885176 GGLTR3F1 724 + 1884682 1885176 0 2 232,228, 0,266, +,+, 742885 LTR ERVL 599 chrW 1885240 1887005 GGERV10_LTR 737 + 1885240 1887005 0 3 80,153,1445, 0,166,320, +,+,+, 742887 LTR ERVL 599 chrW 1887334 1900861 GGERVL-A-int 804 - 1887334 1900861 0 2 566,232, 0,13295, -,-, 742889 LTR ERVL 599 chrW 1887889 1891365 GGLTR3F1 790 - 1887889 1891365 0 2 2995,479, 0,2997, -,-, 742890 LTR ERVL 599 chrW 1891365 1892458 GGLTR3F2 889 + 1891365 1892458 0 2 611,482, 0,611, +,+, 742891 LTR ERVL 599 chrW 1892458 1900616 GGLTR7-int 815 - 1892458 1900616 0 3 105,937,1279, 0,5931,6879, -,-,-, 742892 LTR ERV1 599 chrW 1892563 1898389 GGERV10_LTR 949 - 1892563 1898389 0 3 220,5385,220, 0,220,5606, -,-,-, 742893 LTR ERVL 599 chrW 1901623 1904098 GGLTR7A 820 - 1901623 1904098 0 2 1889,586, 0,1889, -,-, 742896 LTR ERV1 599 chrW 1904290 1917817 GGERVL-A-int 804 + 1904290 1917817 0 2 232,566, 0,12961, +,+, 742898 LTR ERVL 599 chrW 1904535 1912693 GGLTR7-int 815 + 1904535 1912693 0 3 1279,937,105, 0,1290,8053, +,+,+, 742899 LTR ERV1 599 chrW 1906762 1912588 GGERV10_LTR 949 + 1906762 1912588 0 3 220,5385,220, 0,221,5606, +,+,+, 742900 LTR ERVL 599 chrW 1912693 1913786 GGERVL-A-int 889 - 1912693 1913786 0 2 482,611, 0,482, -,-, 742901 LTR ERVL 599 chrW 1913786 1917262 GGLTR3F1 813 + 1913786 1917262 0 3 222,80,2995, 0,399,481, +,+,+, 742902 LTR ERVL 599 chrW 1918146 1919911 GGERV10_LTR 737 - 1918146 1919911 0 3 1445,153,80, 0,1446,1685, -,-,-, 742906 LTR ERVL 599 chrW 1921196 1922409 GGERVL18-int 703 + 1921196 1922409 0 2 343,870, 0,343, +,+, 742909 LTR ERVL 599 chrW 1927062 1930308 GGERVL18-int 647 - 1927062 1930308 0 3 1139,511,961, 0,1616,2285, -,-,-, 742914 LTR ERVL 599 chrW 1932165 1934407 GGERVL18-int 464 + 1932165 1934407 0 2 339,1895, 0,347, +,+, 742921 LTR ERVL 599 chrW 1938003 1939371 GGERV28_I-int 399 - 1938003 1939371 0 2 58,128, 0,1240, -,-, 742926 LTR ERVK 599 chrW 1941886 1942735 GGLTR7-int 783 - 1941886 1942735 0 3 350,264,213, 0,350,636, -,-,-, 742927 LTR ERV1 599 chrW 1942973 1946699 GGERV28_I-int 48 - 1942973 1946699 0 2 1967,1444, 0,2282, -,-, 742928 LTR ERVK 599 chrW 1948225 1950497 ENS3-int 866 - 1948225 1950497 0 2 1339,929, 0,1343, -,-, 742930 LTR ERVL 599 chrW 1955793 1958073 GGERVL18-int 784 + 1955793 1958073 0 3 1771,348,157, 0,1775,2123, +,+,+, 742938 LTR ERVL 599 chrW 1958073 1958421 GGLTR3D 765 + 1958073 1958421 0 2 152,196, 0,152, +,+, 742939 LTR ERVL 599 chrW 1962220 1962790 GGERVK10-int 387 + 1962220 1962790 0 3 64,125,61, 0,223,509, +,+,+, 742943 LTR ERVK 600 chrW 1970945 1973319 GGLTR7-int 387 + 1970945 1973319 0 4 101,259,279,231, 0,103,1602,2143, +,+,+,+, 742950 LTR ERV1 600 chrW 1973522 1978687 GGLTR7-int 513 + 1973522 1978687 0 5 164,190,261,1239,106, 0,2640,2925,3549,5059, +,+,+,+,+, 742953 LTR ERV1 600 chrW 1974408 1976138 GGLTR7-int 395 - 1974408 1976138 0 3 339,53,181, 0,508,1549, -,-,-, 742955 LTR ERV1 600 chrW 1979292 1979384 GGERV20_I-int 557 - 1979292 1979384 0 2 37,54, 0,38, -,-, 742959 LTR ERVL 600 chrW 1980002 1980801 GGLTR3E1 743 - 1980002 1980801 0 2 61,534, 0,265, -,-, 742962 LTR ERVL 600 chrW 1983687 1985118 CR1-C3 709 - 1983687 1985118 0 2 299,596, 0,835, -,-, 742965 LINE CR1 600 chrW 1985118 1985593 GGERVL18-int 620 - 1985118 1985593 0 2 306,169, 0,306, -,-, 742967 LTR ERVL 600 chrW 1985608 1992863 GGLTR11-int 774 - 1985608 1992863 0 5 3001,637,110,2862,265, 0,3349,4012,4127,6990, -,-,-,-,-, 742968 LTR ERV1 600 chrW 1994138 1995374 GGERVL-A-int 603 + 1994138 1995374 0 2 529,707, 0,529, +,+, 742971 LTR ERVL 600 chrW 2004911 2009626 GGLTR7-int 851 + 2004911 2009626 0 3 609,1619,1581, 0,609,3134, +,+,+, 742985 LTR ERV1 600 chrW 2009661 2011889 GGLTR7A 859 - 2009661 2011889 0 2 1619,609, 0,1619, -,-, 742988 LTR ERV1 600 chrW 2011889 2016541 GGERV10_LTR 781 - 2011889 2016541 0 4 3354,971,154,83, 0,3354,4326,4569, -,-,-,-, 742989 LTR ERVL 600 chrW 2019201 2021258 GGLTR3C2 493 - 2019201 2021258 0 2 1527,530, 0,1527, -,-, 742993 LTR ERVL 600 chrW 2022115 2027428 GGLTR3A 707 + 2022115 2027428 0 4 526,4143,77,567, 0,526,4669,4746, +,+,+,+, 742995 LTR ERVL 600 chrW 2027453 2029869 GGLTR7-int 492 - 2027453 2029869 0 2 1259,1061, 0,1355, -,-, 742996 LTR ERV1 600 chrW 2031898 2039829 GGERVL-B-int 834 + 2031898 2039829 0 4 1198,965,62,514, 0,5777,6742,7417, +,+,+,+, 742999 LTR ERVL 600 chrW 2033096 2037675 ENS1-LTR 877 + 2033096 2037675 0 3 814,2827,937, 0,815,3642, +,+,+, 743000 LTR ERVL 600 chrW 2040750 2043778 GGERV10_LTR 443 - 2040750 2043778 0 2 274,2754, 0,274, -,-, 743002 LTR ERVL 600 chrW 2043799 2048622 GGLTR11-int 790 + 2043799 2048622 0 4 431,1564,452,1674, 0,432,2000,3149, +,+,+,+, 743003 LTR ERV1 600 chrW 2049095 2050481 GGERVL18-int 750 - 2049095 2050481 0 2 118,1268, 0,118, -,-, 743006 LTR ERVL 600 chrW 2051597 2055873 GGLTR3F1 766 + 2051597 2055873 0 2 472,3802, 0,474, +,+, 743008 LTR ERVL 600 chrW 2056187 2057005 GGLTR7-int 739 - 2056187 2057005 0 3 353,257,192, 0,353,626, -,-,-, 743009 LTR ERV1 600 chrW 2057575 2061819 GGERV28_I-int 112 - 2057575 2061819 0 2 3287,675, 0,3569, -,-, 743010 LTR ERVK 600 chrW 2070169 2080208 GGERVL-A-int 813 + 2070169 2080208 0 5 528,1919,3942,51,208, 0,528,5802,9780,9831, +,+,+,+,+, 743015 LTR ERVL 600 chrW 2072616 2075971 ENS1-LTR 853 + 2072616 2075971 0 3 938,2273,144, 0,938,3211, +,+,+, 743016 LTR ERVL 600 chrW 2080201 2083384 GGERV28_I-int 881 - 2080201 2083384 0 3 289,1491,478, 0,1214,2705, -,-,-, 743017 LTR ERVK 600 chrW 2080950 2081436 GGLTR7-int 751 - 2080950 2081436 0 2 345,141, 0,345, -,-, 743018 LTR ERV1 600 chrW 2083940 2084288 GGERV10_LTR 658 + 2083940 2084288 0 2 63,166, 0,182, +,+, 743019 LTR ERVL 600 chrW 2084411 2086511 GGERVL18-int 569 + 2084411 2086511 0 2 1219,880, 0,1220, +,+, 743021 LTR ERVL 600 chrW 2086507 2091050 GGLTR11-int 807 + 2086507 2091050 0 4 150,1565,452,1674, 0,151,1720,2869, +,+,+,+, 743022 LTR ERV1 600 chrW 2091052 2093433 GGERVL-A-int 736 + 2091052 2093433 0 4 509,140,1588,139, 0,509,654,2242, +,+,+,+, 743024 LTR ERVL 600 chrW 2093426 2097095 GGLTR11-int 747 + 2093426 2097095 0 3 1927,743,446, 0,2480,3223, +,+,+, 743025 LTR ERV1 9 chrW 2097094 2097409 GGERV10_LTR 874 + 2097094 2097409 0 2 62,159, 0,156, +,+, 743027 LTR ERVL 601 chrW 2097938 2100503 GGERV20_I-int 530 - 2097938 2100503 0 2 82,431, 0,2134, -,-, 743029 LTR ERVL 601 chrW 2101286 2106913 CR1-F 652 + 2101286 2106913 0 3 374,54,984, 0,385,4643, +,+,+, 743038 LINE CR1 601 chrW 2101725 2105928 GGERVL18-LTR 767 + 2101725 2105928 0 2 202,164, 0,4039, +,+, 743039 LTR ERVL 601 chrW 2107354 2109476 GGLTR7-int 367 + 2107354 2109476 0 3 115,252,224, 0,117,1898, +,+,+, 743041 LTR ERV1 601 chrW 2109553 2117799 GGLTR7A 869 + 2109553 2117799 0 4 610,375,6021,581, 0,610,1644,7665, +,+,+,+, 743043 LTR ERV1 601 chrW 2118947 2134577 GGLTR7-int 348 + 2118947 2134577 0 6 56,1082,509,1105,258,112, 0,248,1559,11670,14343,15518, +,+,+,+,+,+, 743045 LTR ERV1 601 chrW 2122136 2130542 GGERVL18-int 739 - 2122136 2130542 0 4 345,4782,512,341, 0,345,7545,8065, -,-,-,-, 743047 LTR ERVL 601 chrW 2135115 2141117 GGERVL-A-int 585 + 2135115 2141117 0 3 116,192,1125, 0,696,4877, +,+,+, 743053 LTR ERVL 601 chrW 2141115 2146175 CR1-G 633 - 2141115 2146175 0 3 1964,1378,280, 0,3351,4780, -,-,-, 743056 LINE CR1 601 chrW 2146176 2148555 GGERVL-C-int 817 + 2146176 2148555 0 3 238,1635,506, 0,238,1873, +,+,+, 743058 LTR ERVL 601 chrW 2152168 2155313 GGLTR7-int 607 + 2152168 2155313 0 4 1329,233,90,593, 0,2228,2461,2552, +,+,+,+, 743066 LTR ERV1 601 chrW 2164393 2169827 GGERV10_LTR 647 - 2164393 2169827 0 4 160,80,3393,492, 0,243,324,4942, -,-,-,-, 743080 LTR ERVL 601 chrW 2168110 2169334 GGLTR7A 743 - 2168110 2169334 0 2 279,239, 0,985, -,-, 743081 LTR ERV1 601 chrW 2169836 2170943 CR1-F 921 + 2169836 2170943 0 2 330,777, 0,330, +,+, 743083 LINE CR1 75 chrW 2220957 2230547 GGERV20_I-int 703 - 2220957 2230547 0 5 3393,492,1135,120,46, 0,4618,7774,8909,9544, -,-,-,-,-, 743084 LTR ERVL 601 chrW 2224350 2225574 GGLTR7A 743 - 2224350 2225574 0 2 279,239, 0,985, -,-, 743085 LTR ERV1 75 chrW 2226076 2228738 CR1-F 911 + 2226076 2228738 0 2 330,2332, 0,330, +,+, 743087 LINE CR1 602 chrW 2230547 2232552 GGERV10_LTR 486 - 2230547 2232552 0 2 1845,159, 0,1846, -,-, 743090 LTR ERVL 602 chrW 2239539 2244872 CR1-D 685 - 2239539 2244872 0 2 864,221, 0,5112, -,-, 743101 LINE CR1 602 chrW 2240400 2244651 CR1-G 662 - 2240400 2244651 0 2 4014,136, 0,4115, -,-, 743102 LINE CR1 602 chrW 2248800 2253148 GGERVL18-LTR 601 - 2248800 2253148 0 3 335,1662,351, 0,2332,3997, -,-,-, 743105 LTR ERVL 602 chrW 2262011 2264213 Char12Mar1_GG 524 - 2262011 2264213 0 2 1126,315, 0,1887, -,-, 743119 DNA hAT-Charlie 602 chrW 2263120 2263901 CR1-D2 685 + 2263120 2263901 0 2 174,604, 0,177, +,+, 743120 LINE CR1 602 chrW 2264879 2267635 CR1-D 765 - 2264879 2267635 0 3 53,505,1781, 0,53,975, -,-,-, 743121 LINE CR1 602 chrW 2265437 2265854 GGLTR3G2 544 - 2265437 2265854 0 2 50,367, 0,50, -,-, 743122 LTR ERVL 602 chrW 2283174 2283949 GGERVL-C-int 791 - 2283174 2283949 0 2 128,647, 0,128, -,-, 743140 LTR ERVL 602 chrW 2283947 2287700 GGERVL-A-int 753 - 2283947 2287700 0 2 3031,706, 0,3047, -,-, 743141 LTR ERVL 602 chrW 2289184 2293738 GGERVL18-int 638 + 2289184 2293738 0 4 1034,532,129,979, 0,1034,3195,3575, +,+,+,+, 743145 LTR ERVL 602 chrW 2293771 2294454 GGLTR3D 508 - 2293771 2294454 0 2 336,299, 0,384, -,-, 743148 LTR ERVL 602 chrW 2301323 2302472 CR1-F2 442 - 2301323 2302472 0 2 81,218, 0,931, -,-, 743155 LINE CR1 602 chrW 2303035 2306326 GGLTR7-int 539 + 2303035 2306326 0 4 1888,244,80,561, 0,2405,2649,2730, +,+,+,+, 743159 LTR ERV1 602 chrW 2310067 2310685 GGERVL-B-int 664 + 2310067 2310685 0 2 545,73, 0,545, +,+, 743167 LTR ERVL 602 chrW 2310736 2312539 GGERVL18-int 853 + 2310736 2312539 0 2 68,1716, 0,87, +,+, 743168 LTR ERVL 602 chrW 2315555 2317209 GGERVL18-LTR 700 - 2315555 2317209 0 2 1308,278, 0,1376, -,-, 743172 LTR ERVL 602 chrW 2347141 2356118 CR1-D 773 - 2347141 2356118 0 4 67,558,1988,636, 0,2251,3226,8341, -,-,-,-, 743202 LINE CR1 602 chrW 2347204 2348726 Char12Mar1_GG 501 - 2347204 2348726 0 2 446,315, 0,1207, -,-, 743203 DNA hAT-Charlie 602 chrW 2347647 2348414 CR1-D2 728 + 2347647 2348414 0 2 151,604, 0,163, +,+, 743204 LINE CR1 602 chrW 2349950 2350367 GGLTR3G2 544 - 2349950 2350367 0 2 50,367, 0,50, -,-, 743205 LTR ERVL 602 chrW 2352374 2355482 GGERVL-A-int 705 - 2352374 2355482 0 3 1215,1397,496, 0,1215,2612, -,-,-, 743207 LTR ERVL 603 chrW 2367010 2369834 CR1-B2 440 + 2367010 2369834 0 2 136,54, 0,2770, +,+, 743225 LINE CR1 603 chrW 2374161 2381713 GGLTR7A 807 + 2374161 2381713 0 3 588,6376,588, 0,588,6964, +,+,+, 743234 LTR ERV1 603 chrW 2382881 2383353 GGERVL18-int 521 - 2382881 2383353 0 2 344,128, 0,344, -,-, 743237 LTR ERVL 603 chrW 2383803 2383877 GGERVL18-LTR 773 + 2383803 2383877 0 2 44,30, 0,44, +,+, 743239 LTR ERVL 603 chrW 2385814 2387559 GGERVL-C-int 219 + 2385814 2387559 0 4 192,346,151,124, 0,516,1121,1621, +,+,+,+, 743242 LTR ERVL 603 chrW 2387673 2392617 GGERVL-B-int 523 + 2387673 2392617 0 3 893,467,453, 0,893,4491, +,+,+, 743244 LTR ERVL 603 chrW 2389034 2392142 GGERVL-B-int 820 - 2389034 2392142 0 4 577,86,1331,1113, 0,577,663,1995, -,-,-,-, 743245 LTR ERVL 603 chrW 2393043 2397631 GGERVL-A-int 670 + 2393043 2397631 0 3 532,748,1796, 0,532,2792, +,+,+, 743246 LTR ERVL 603 chrW 2398533 2403239 GGERVL18-int 603 + 2398533 2403239 0 3 1084,3270,348, 0,1084,4358, +,+,+, 743251 LTR ERVL 603 chrW 2403681 2411673 CR1-F2 811 + 2403681 2411673 0 3 453,575,99, 0,6853,7893, +,+,+, 743252 LINE CR1 603 chrW 2404142 2409976 GGERV10_LTR 897 - 2404142 2409976 0 3 220,5393,220, 0,220,5614, -,-,-, 743253 LTR ERVL 603 chrW 2448144 2456431 GGLTR7-int 537 + 2448144 2456431 0 9 591,171,210,250,1315,414,70,2199,608, 0,593,764,1254,2798,4368,5012,5480,7679, +,+,+,+,+,+,+,+,+, 743256 LTR ERV1 603 chrW 2459959 2468181 GGERV20_I-int 962 + 2459959 2468181 0 3 223,3752,1164, 0,224,7058, +,+,+, 743259 LTR ERVL 603 chrW 2463935 2467017 GGLTR10D 922 + 2463935 2467017 0 4 346,444,1946,346, 0,346,790,2736, +,+,+,+, 743260 LTR ERVK 603 chrW 2474802 2475223 GGERV10_LTR 495 + 2474802 2475223 0 3 96,20,152, 0,144,269, +,+,+, 743264 LTR ERVL 603 chrW 2478007 2478571 GGERVL-C-int 889 - 2478007 2478571 0 2 527,37, 0,527, -,-, 743268 LTR ERVL 603 chrW 2480179 2480596 GGLTR7A 722 + 2480179 2480596 0 2 217,200, 0,217, +,+, 743271 LTR ERV1 75 chrW 2480597 2492379 GGLTR3F1 862 + 2480597 2492379 0 3 97,153,73, 0,11207,11709, +,+,+, 743272 LTR ERVL 603 chrW 2482179 2484079 CR1-E 785 - 2482179 2484079 0 3 405,278,156, 0,405,1744, -,-,-, 743275 LINE CR1 75 chrW 2484425 2491811 GGLTR7-int 828 - 2484425 2491811 0 5 600,2552,963,1948,175, 0,600,4050,5256,7211, -,-,-,-,-, 743277 LTR ERV1 604 chrW 2492401 2494420 GGLTR3F1 929 + 2492401 2494420 0 2 1525,494, 0,1525, +,+, 743281 LTR ERVL 604 chrW 2494420 2495439 GGLTR7A 850 - 2494420 2495439 0 2 419,600, 0,419, -,-, 743282 LTR ERV1 604 chrW 2495630 2498034 GGERVL-A-int 371 - 2495630 2498034 0 3 259,334,242, 0,814,2162, -,-,-, 743284 LTR ERVL 604 chrW 2498513 2500000 CR1-F2 839 - 2498513 2500000 0 2 54,940, 0,547, -,-, 743287 LINE CR1 604 chrW 2502094 2503939 GGERV28_I-int 151 - 2502094 2503939 0 2 417,259, 0,1586, -,-, 743291 LTR ERVK 604 chrW 2504063 2504873 GGLTR7-int 797 - 2504063 2504873 0 3 349,277,182, 0,350,628, -,-,-, 743293 LTR ERV1 604 chrW 2508319 2514278 GGERV28_I-int 177 + 2508319 2514278 0 2 4350,319, 0,5640, +,+, 743299 LTR ERVK 604 chrW 2516395 2516682 Z-REP 188 - 2516395 2516682 0 2 54,103, 0,184, -,-, 743302 Satellite macro 604 chrW 2516829 2517361 GGLTR7-int 167 + 2516829 2517361 0 2 115,353, 0,179, +,+, 743304 LTR ERV1 604 chrW 2517429 2520636 CR1-C 778 - 2517429 2520636 0 2 1267,1447, 0,1760, -,-, 743305 LINE CR1 604 chrW 2518696 2519189 GGLTR3F1 919 + 2518696 2519189 0 2 231,209, 0,284, +,+, 743306 LTR ERVL 604 chrW 2530379 2536465 CR1-E 744 - 2530379 2536465 0 3 1261,155,377, 0,1545,5709, -,-,-, 743317 LINE CR1 604 chrW 2532093 2535566 GGERVL18-int 744 - 2532093 2535566 0 4 194,285,483,2511, 0,194,479,962, -,-,-,-, 743319 LTR ERVL 604 chrW 2537843 2539552 CR1-C 846 + 2537843 2539552 0 2 792,917, 0,792, +,+, 743322 LINE CR1 604 chrW 2539873 2540173 Mariner1b_GG 634 - 2539873 2540173 0 2 240,58, 0,242, -,-, 743324 DNA TcMar-Mariner 604 chrW 2547577 2547924 CR1-C4 609 - 2547577 2547924 0 2 53,211, 0,136, -,-, 743328 LINE CR1 604 chrW 2548602 2551975 GGLTR10D 953 + 2548602 2551975 0 3 346,2681,346, 0,346,3027, +,+,+, 743330 LTR ERVK 604 chrW 2558478 2560425 GGLTR3A 733 + 2558478 2560425 0 2 538,1409, 0,538, +,+, 743340 LTR ERVL 604 chrW 2563469 2564400 CR1-Y4 698 + 2563469 2564400 0 2 267,158, 0,773, +,+, 743345 LINE CR1 604 chrW 2564545 2566659 CR1-H2 859 - 2564545 2566659 0 2 61,2053, 0,61, -,-, 743347 LINE CR1 604 chrW 2566657 2577184 GGERVL-C-int 621 + 2566657 2577184 0 3 587,1356,1071, 0,587,9456, +,+,+, 743348 LTR ERVL 604 chrW 2568600 2576113 GGLTR7A 843 + 2568600 2576113 0 3 609,6295,609, 0,609,6904, +,+,+, 743349 LTR ERV1 604 chrW 2577184 2580054 GGERVL-B-int 785 + 2577184 2580054 0 2 567,2303, 0,567, +,+, 743350 LTR ERVL 604 chrW 2580048 2581898 GGERVL-B-int 759 - 2580048 2581898 0 3 378,219,1074, 0,378,776, -,-,-, 743351 LTR ERVL 604 chrW 2582856 2591916 CR1-C 775 - 2582856 2591916 0 2 361,119, 0,8941, -,-, 743356 LINE CR1 604 chrW 2583217 2583743 GGLTR3F1 852 - 2583217 2583743 0 2 490,36, 0,490, -,-, 743357 LTR ERVL 604 chrW 2588475 2591797 GGERVL-A-int 754 + 2588475 2591797 0 5 700,261,947,230,236, 0,702,1854,2801,3086, +,+,+,+,+, 743359 LTR ERVL 604 chrW 2593816 2594904 GGLTR3C2 511 - 2593816 2594904 0 2 129,411, 0,677, -,-, 743366 LTR ERVL 604 chrW 2594904 2595384 GGERVL-C-int 789 - 2594904 2595384 0 2 268,211, 0,269, -,-, 743368 LTR ERVL 604 chrW 2595384 2600463 GGERV10_LTR 699 - 2595384 2600463 0 5 50,45,294,4254,124, 0,300,345,699,4955, -,-,-,-,-, 743369 LTR ERVL 604 chrW 2601257 2603559 GGLTR7-int 729 - 2601257 2603559 0 3 610,346,1342, 0,611,960, -,-,-, 743373 LTR ERV1 604 chrW 2603557 2605856 GGERVL18-int 767 + 2603557 2605856 0 2 330,1968, 0,331, +,+, 743374 LTR ERVL 604 chrW 2605856 2606737 GGERV28_LTR 799 + 2605856 2606737 0 2 477,404, 0,477, +,+, 743375 LTR ERVK 75 chrW 2609610 2622809 CR1-D 682 + 2609610 2622809 0 4 346,498,474,2558, 0,352,9707,10641, +,+,+,+, 743378 LINE CR1 604 chrW 2611592 2612012 GGLTR3D 533 - 2611592 2612012 0 2 202,218, 0,202, -,-, 743382 LTR ERVL 604 chrW 2612014 2612524 GGERVL-C-int 831 - 2612014 2612524 0 2 474,36, 0,474, -,-, 743383 LTR ERVL 604 chrW 2612524 2618318 GGLTR3F1 864 - 2612524 2618318 0 2 5300,492, 0,5302, -,-, 743384 LTR ERVL 605 chrW 2623423 2626383 GGERV20_I-int 461 + 2623423 2626383 0 4 302,489,67,492, 0,1077,1825,2468, +,+,+,+, 743387 LTR ERVL 605 chrW 2626570 2628129 GGERV20_I-int 454 + 2626570 2628129 0 2 524,264, 0,1295, +,+, 743391 LTR ERVL 605 chrW 2630093 2630372 GGLTR3D 743 - 2630093 2630372 0 2 83,189, 0,90, -,-, 743395 LTR ERVL 605 chrW 2639091 2652291 CR1-D 682 + 2639091 2652291 0 4 346,498,474,2558, 0,352,9708,10642, +,+,+,+, 743403 LINE CR1 605 chrW 2641073 2641493 GGLTR3D 538 - 2641073 2641493 0 2 202,218, 0,202, -,-, 743407 LTR ERVL 605 chrW 2641495 2642005 GGERVL-C-int 831 - 2641495 2642005 0 2 474,36, 0,474, -,-, 743408 LTR ERVL 605 chrW 2642005 2647800 GGLTR3F1 863 - 2642005 2647800 0 2 5301,492, 0,5303, -,-, 743409 LTR ERVL 605 chrW 2652905 2655865 GGERV20_I-int 461 + 2652905 2655865 0 4 302,489,67,492, 0,1077,1825,2468, +,+,+,+, 743412 LTR ERVL 605 chrW 2656052 2667865 GGERV20_I-int 528 + 2656052 2667865 0 4 524,264,865,50, 0,1295,3455,11763, +,+,+,+, 743417 LTR ERVL 605 chrW 2660373 2667815 GGERVL-B-int 823 - 2660373 2667815 0 6 474,1252,955,477,2411,484, 0,474,1726,3207,4545,6958, -,-,-,-,-,-, 743421 LTR ERVL 605 chrW 2727508 2728430 GGERVL-A-int 389 + 2727508 2728430 0 2 546,376, 0,546, +,+, 743432 LTR ERVL 605 chrW 2728437 2729785 GGERVL-A-int 512 + 2728437 2729785 0 2 51,964, 0,384, +,+, 743433 LTR ERVL 605 chrW 2729785 2731257 GGERVL-C-int 561 - 2729785 2731257 0 2 558,895, 0,577, -,-, 743435 LTR ERVL 605 chrW 2731257 2737317 GGERVL18-LTR 682 - 2731257 2737317 0 3 347,5370,342, 0,347,5718, -,-,-, 743436 LTR ERVL 605 chrW 2740569 2746896 GGERVL-B-int 599 + 2740569 2746896 0 6 563,344,1301,240,1811,541, 0,563,1276,2579,3975,5786, +,+,+,+,+,+, 743438 LTR ERVL 605 chrW 2747843 2748284 GGLTR3C2 420 - 2747843 2748284 0 2 115,292, 0,149, -,-, 743441 LTR ERVL 605 chrW 2749179 2750086 CR1-D 676 - 2749179 2750086 0 2 567,314, 0,593, -,-, 743443 LINE CR1 75 chrW 2751322 2754913 GGERV20_I-int 237 - 2751322 2754913 0 3 1117,1707,339, 0,1347,3252, -,-,-, 743447 LTR ERVL 606 chrW 2755203 2755541 GGERV10_LTR 787 - 2755203 2755541 0 2 159,65, 0,273, -,-, 743451 LTR ERVL 606 chrW 2757110 2758140 CR1-H 889 - 2757110 2758140 0 2 93,333, 0,697, -,-, 743453 LINE CR1 606 chrW 2763127 2764311 CR1-E 774 + 2763127 2764311 0 2 154,474, 0,710, +,+, 743464 LINE CR1 606 chrW 2769915 2770555 CR1-D 834 + 2769915 2770555 0 2 37,56, 0,584, +,+, 743471 LINE CR1 606 chrW 2778852 2780669 GGERVL-B-int 804 - 2778852 2780669 0 3 545,1010,261, 0,545,1556, -,-,-, 743480 LTR ERVL 606 chrW 2781527 2790000 GGLTR7-int 459 + 2781527 2790000 0 2 608,1463, 0,7010, +,+, 743482 LTR ERV1 606 chrW 2782246 2782776 GGLTR3F1 938 - 2782246 2782776 0 2 494,36, 0,494, -,-, 743483 LTR ERVL 606 chrW 2782776 2788534 GGLTR3F1 891 - 2782776 2788534 0 2 5263,494, 0,5264, -,-, 743484 LTR ERVL 606 chrW 2791783 2802301 GGERV10_LTR 759 - 2791783 2802301 0 2 159,43, 0,10475, -,-, 743487 LTR ERVL 606 chrW 2792067 2802258 GGLTR7-int 851 + 2792067 2802258 0 5 610,1679,1006,1147,607, 0,610,2300,8436,9584, +,+,+,+,+, 743488 LTR ERV1 606 chrW 2795364 2800503 GGLTR3A 801 - 2795364 2800503 0 2 4618,521, 0,4618, -,-, 743490 LTR ERVL 606 chrW 2803888 2815758 GGLTR7-int 518 + 2803888 2815758 0 9 558,1124,970,42,201,261,350,588,99, 0,1658,2782,9054,9096,9313,9574,10868,11771, +,+,+,+,+,+,+,+,+, 743492 LTR ERV1 606 chrW 2808951 2812704 GGERV28_I-int 73 + 2808951 2812704 0 2 1444,1994, 0,1759, +,+, 743496 LTR ERVK 606 chrW 2816812 2818780 GGLTR3F1 785 - 2816812 2818780 0 2 1474,492, 0,1476, -,-, 743499 LTR ERVL 606 chrW 2819779 2823271 CR1-D 769 + 2819779 2823271 0 2 474,2558, 0,934, +,+, 743501 LINE CR1 606 chrW 2823885 2826392 GGERV20_I-int 357 + 2823885 2826392 0 3 302,483,367, 0,1077,2140, +,+,+, 743503 LTR ERVL 606 chrW 2831265 2831695 CR1-Y 814 - 2831265 2831695 0 2 225,205, 0,225, -,-, 743507 LINE CR1 606 chrW 2832446 2834730 GGERVL18-int 744 - 2832446 2834730 0 3 343,1128,808, 0,348,1476, -,-,-, 743509 LTR ERVL 606 chrW 2834748 2836000 GGERVL18-int 712 - 2834748 2836000 0 2 331,921, 0,331, -,-, 743510 LTR ERVL 606 chrW 2836933 2838218 GGLTR5B 555 + 2836933 2838218 0 2 139,371, 0,914, +,+, 743512 LTR ERVL 606 chrW 2837346 2837847 GGLTR3F2 822 + 2837346 2837847 0 2 232,229, 0,272, +,+, 743514 LTR ERVL 606 chrW 2847673 2849013 GGERVL-C-int 827 - 2847673 2849013 0 2 527,813, 0,527, -,-, 743524 LTR ERVL 606 chrW 2849124 2850943 GGLTR3B1 717 + 2849124 2850943 0 2 295,1524, 0,295, +,+, 743526 LTR ERVL 606 chrW 2850943 2865741 GGERVL-B-int 691 + 2850943 2865741 0 3 456,731,2377, 0,458,12421, +,+,+, 743527 LTR ERVL 606 chrW 2851818 2863251 GGERV20_I-int 873 + 2851818 2863251 0 6 315,352,521,213,5385,220, 0,315,5093,5614,5828,11213, +,+,+,+,+,+, 743528 LTR ERVL 606 chrW 2863251 2863366 GGERVL-C-int 843 + 2863251 2863366 0 2 38,77, 0,38, +,+, 743530 LTR ERVL 606 chrW 2867615 2868637 GGERVL-B-int 791 + 2867615 2868637 0 2 571,448, 0,574, +,+, 743535 LTR ERVL 606 chrW 2868638 2869306 GGERVL-C-int 730 + 2868638 2869306 0 2 83,585, 0,83, +,+, 743536 LTR ERVL 606 chrW 2870030 2876221 GGERVL-B-int 742 - 2870030 2876221 0 6 452,1673,321,2810,264,499, 0,452,2125,2446,5426,5692, -,-,-,-,-,-, 743537 LTR ERVL 606 chrW 2877858 2879646 GGLTR3B1 816 + 2877858 2879646 0 3 34,230,1524, 0,34,264, +,+,+, 743539 LTR ERVL 75 chrW 2879646 2890527 GGERVL-B-int 713 + 2879646 2890527 0 3 456,731,4291, 0,458,6590, +,+,+, 743540 LTR ERVL 75 chrW 2880521 2886238 GGERVL-B-int 799 + 2880521 2886238 0 4 315,352,547,77, 0,315,5093,5640, +,+,+,+, 743541 LTR ERVL 607 chrW 2895287 2898335 CR1-G 765 + 2895287 2898335 0 2 1964,1084, 0,1964, +,+, 743549 LINE CR1 607 chrW 2900775 2907961 GGERVL18-int 660 - 2900775 2907961 0 5 334,1747,303,3209,402, 0,338,2589,3488,6784, -,-,-,-,-, 743554 LTR ERVL 607 chrW 2907935 2912334 GGERVL-B-int 688 - 2907935 2912334 0 3 41,1249,196, 0,64,4203, -,-,-, 743557 LTR ERVL 607 chrW 2909064 2909929 GGERVL-B-int 578 - 2909064 2909929 0 2 408,455, 0,410, -,-, 743558 LTR ERVL 607 chrW 2910196 2912137 GGERVL-A-int 695 - 2910196 2912137 0 3 413,1023,505, 0,413,1436, -,-,-, 743560 LTR ERVL 607 chrW 2913122 2914136 GGERVL18-int 437 - 2913122 2914136 0 2 578,129, 0,885, -,-, 743563 LTR ERVL 607 chrW 2914407 2914497 GGLTR3F2 810 - 2914407 2914497 0 2 46,43, 0,47, -,-, 743566 LTR ERVL 607 chrW 2918100 2920262 GGLTR3C2 633 + 2918100 2920262 0 2 220,150, 0,2012, +,+, 743570 LTR ERVL 607 chrW 2922075 2922228 GGLTR3C1 659 - 2922075 2922228 0 2 107,44, 0,109, -,-, 743576 LTR ERVL 607 chrW 2922228 2923369 GGERVL-B-int 316 + 2922228 2923369 0 2 228,735, 0,406, +,+, 743577 LTR ERVL 607 chrW 2923376 2935667 GGLTR3C1 517 - 2923376 2935667 0 3 102,47,342, 0,8538,11949, -,-,-, 743578 LTR ERVL 607 chrW 2926085 2931914 GGERV10_LTR 941 + 2926085 2931914 0 3 223,5385,220, 0,224,5609, +,+,+, 743580 LTR ERVL 607 chrW 2931962 2935325 GGLTR10D 955 + 2931962 2935325 0 3 346,2671,346, 0,346,3017, +,+,+, 743581 LTR ERVK 607 chrW 2935670 2936002 GGERV10_LTR 950 + 2935670 2936002 0 2 112,220, 0,112, +,+, 743582 LTR ERVL 607 chrW 2936974 2941396 GGLTR7-int 493 - 2936974 2941396 0 7 629,739,610,1185,90,274,127, 0,735,1574,2184,3371,4021,4295, -,-,-,-,-,-,-, 743585 LTR ERV1 607 chrW 2943303 2947105 GGERVL-A-int 736 + 2943303 2947105 0 2 1963,1839, 0,1963, +,+, 743589 LTR ERVL 607 chrW 2948369 2952010 GGERV28_I-int 151 + 2948369 2952010 0 3 675,365,1995, 0,968,1646, +,+,+, 743590 LTR ERVK 607 chrW 2952248 2953093 GGLTR7-int 784 + 2952248 2953093 0 3 213,260,350, 0,235,495, +,+,+, 743591 LTR ERV1 607 chrW 2954010 2955332 GGLTR3B1 730 + 2954010 2955332 0 2 822,500, 0,822, +,+, 743592 LTR ERVL 607 chrW 2956351 2959781 GGERV28_I-int 250 + 2956351 2959781 0 4 533,350,109,295, 0,1861,2970,3135, +,+,+,+, 743593 LTR ERVK 607 chrW 2963859 2968236 GGLTR3A 868 + 2963859 2968236 0 2 3850,527, 0,3850, +,+, 743596 LTR ERVL 607 chrW 2968951 2973664 GGERV20_I-int 403 - 2968951 2973664 0 3 2709,151,921, 0,3625,3792, -,-,-, 743599 LTR ERVL 607 chrW 2976791 2977058 GGERV10_LTR 595 + 2976791 2977058 0 2 69,96, 0,171, +,+, 743605 LTR ERVL 607 chrW 2977060 2979490 GGERV10_LTR 723 + 2977060 2979490 0 3 2111,62,156, 0,2111,2274, +,+,+, 743606 LTR ERVL 607 chrW 2981912 2991800 GGLTR7A 879 + 2981912 2991800 0 4 284,259,5548,609, 0,3450,3731,9279, +,+,+,+, 743611 LTR ERV1 607 chrW 2982215 2985362 GGLTR10D 957 + 2982215 2985362 0 3 118,2683,346, 0,118,2801, +,+,+, 743612 LTR ERVK 607 chrW 2993055 2993553 GGLTR3F1 886 + 2993055 2993553 0 2 230,209, 0,289, +,+, 743615 LTR ERVL 607 chrW 2996818 3000000 GGERVL-B-int 953 - 2996818 3000000 0 3 494,425,2263, 0,494,919, -,-,-, 743618 LTR ERVL 607 chrW 3000000 3002639 GGLTR3F1 833 - 3000000 3002639 0 2 2143,495, 0,2144, -,-, 743619 LTR ERVL 607 chrW 3002639 3003438 GGERVL-A-int 811 - 3002639 3003438 0 3 129,97,554, 0,134,245, -,-,-, 743620 LTR ERVL 608 chrW 3029557 3034220 ENS1-LTR 965 + 3029557 3034220 0 3 913,2836,913, 0,914,3750, +,+,+, 743623 LTR ERVL 608 chrW 3034223 3036185 GGERVL-C-int 620 - 3034223 3036185 0 2 1501,459, 0,1503, -,-, 743624 LTR ERVL 608 chrW 3036185 3039500 GGLTR11-int 675 + 3036185 3039500 0 4 156,763,114,639, 0,1082,2480,2676, +,+,+,+, 743625 LTR ERV1 608 chrW 3040427 3045048 GGERVL-B-int 670 - 3040427 3045048 0 2 427,4194, 0,427, -,-, 743628 LTR ERVL 608 chrW 3045988 3046839 GGLTR7-int 769 - 3045988 3046839 0 3 352,264,213, 0,352,638, -,-,-, 743629 LTR ERV1 608 chrW 3047073 3051255 GGERV28_I-int 161 - 3047073 3051255 0 4 1990,376,786,127, 0,2305,2964,4055, -,-,-,-, 743630 LTR ERVK 608 chrW 3051994 3053628 GGERVL-B-int 589 - 3051994 3053628 0 2 1083,549, 0,1085, -,-, 743631 LTR ERVL 608 chrW 3057662 3063857 GGLTR3A 426 + 3057662 3063857 0 2 568,5626, 0,569, +,+, 743636 LTR ERVL 608 chrW 3069077 3069400 GGERV10_LTR 655 + 3069077 3069400 0 2 62,158, 0,165, +,+, 743641 LTR ERVL 608 chrW 3071872 3072085 CR1-H 815 - 3071872 3072085 0 2 56,157, 0,56, -,-, 743644 LINE CR1 608 chrW 3080726 3082562 CR1-Y4 387 - 3080726 3082562 0 2 319,426, 0,1410, -,-, 743656 LINE CR1 608 chrW 3089340 3090171 GGERV10_LTR 619 - 3089340 3090171 0 3 88,52,63, 0,607,768, -,-,-, 743663 LTR ERVL 608 chrW 3090239 3096957 GGERVL-A-int 759 - 3090239 3096957 0 2 1004,429, 0,6289, -,-, 743665 LTR ERVL 608 chrW 3091373 3096101 GGERVL-B-int 667 - 3091373 3096101 0 4 2974,322,47,533, 0,3790,4148,4195, -,-,-,-, 743666 LTR ERVL 608 chrW 3094349 3095163 GGLTR3B1 772 - 3094349 3095163 0 2 99,414, 0,400, -,-, 743667 LTR ERVL 608 chrW 3094451 3094749 GGLTR3E1 742 - 3094451 3094749 0 2 158,140, 0,158, -,-, 743668 LTR ERVL 608 chrW 3097244 3098287 ENS3-int 305 - 3097244 3098287 0 2 866,177, 0,866, -,-, 743670 LTR ERVL 608 chrW 3098777 3099296 (ACCCCATAGGG)n 573 + 3098777 3099296 0 3 161,123,160, 0,224,359, +,+,+, 743672 Satellite Satellite 608 chrW 3099411 3103601 CR1-F 900 - 3099411 3103601 0 2 2194,1986, 0,2204, -,-, 743674 LINE CR1 608 chrW 3104258 3104497 (CTCTATGGGG)n 470 - 3104258 3104497 0 2 89,29, 0,210, -,-, 743678 Satellite Satellite 608 chrW 3111107 3111750 (CTCTATGGGG)n 496 + 3111107 3111750 0 4 116,152,41,148, 0,169,441,495, +,+,+,+, 743706 Satellite Satellite 608 chrW 3111942 3112203 (ACCCCATAGGG)n 554 - 3111942 3112203 0 2 121,140, 0,121, -,-, 743710 Satellite Satellite 608 chrW 3117584 3117954 (CTCTATGGGG)n 458 + 3117584 3117954 0 2 175,80, 0,290, +,+, 743717 Satellite Satellite 608 chrW 3117973 3118257 (ACCCCATAGGG)n 436 + 3117973 3118257 0 2 95,70, 0,214, +,+, 743719 Satellite Satellite 608 chrW 3118269 3118855 (ACCCCATAGGG)n 520 - 3118269 3118855 0 3 121,243,131, 0,152,455, -,-,-, 743721 Satellite Satellite 608 chrW 3119188 3120881 GGERV28_I-int 325 - 3119188 3120881 0 2 94,570, 0,1123, -,-, 743724 LTR ERVK 608 chrW 3123216 3124076 GGLTR7A 780 - 3123216 3124076 0 4 340,260,196,42, 0,340,622,818, -,-,-,-, 743726 LTR ERV1 608 chrW 3127408 3133691 GGLTR3F1 872 - 3127408 3133691 0 3 494,5294,494, 0,494,5789, -,-,-, 743729 LTR ERVL 608 chrW 3135834 3145449 GGLTR7B 545 + 3135834 3145449 0 2 593,572, 0,9043, +,+, 743731 LTR ERV1 608 chrW 3136981 3142806 GGERV10_LTR 961 - 3136981 3142806 0 3 220,5384,220, 0,220,5605, -,-,-, 743732 LTR ERVL 9 chrW 3145501 3148768 GGLTR7-int 394 - 3145501 3148768 0 5 624,112,271,90,123, 0,1863,2029,2304,3144, -,-,-,-,-, 743733 LTR ERV1 609 chrW 3146125 3147363 GGLTR3E1 792 - 3146125 3147363 0 2 65,540, 0,698, -,-, 743734 LTR ERVL 609 chrW 3148855 3149549 GGLTR7B 603 - 3148855 3149549 0 3 46,70,49, 0,124,645, -,-,-, 743737 LTR ERV1 609 chrW 3154683 3155535 GGLTR7-int 781 - 3154683 3155535 0 3 350,267,213, 0,350,639, -,-,-, 743742 LTR ERV1 609 chrW 3155773 3159527 GGERV28_I-int 144 - 3155773 3159527 0 3 1995,376,786, 0,2310,2968, -,-,-, 743743 LTR ERVK 609 chrW 3162607 3163710 CR1-D 788 + 3162607 3163710 0 2 430,328, 0,775, +,+, 743748 LINE CR1 609 chrW 3164384 3179990 CR1-F2 594 + 3164384 3179990 0 3 160,1775,747, 0,1169,14859, +,+,+, 743750 LINE CR1 609 chrW 3173864 3174897 GGERVL-B-int 356 - 3173864 3174897 0 4 110,99,92,732, 0,110,209,301, -,-,-,-, 743757 LTR ERVL 609 chrW 3174896 3179244 ENS1-int 605 + 3174896 3179244 0 4 281,306,1246,488, 0,283,1213,3860, +,+,+,+, 743758 LTR ERVL 609 chrW 3188911 3193988 GGERVL-A-int 757 + 3188911 3193988 0 3 527,1656,2894, 0,527,2183, +,+,+, 743773 LTR ERVL 609 chrW 3196084 3197611 CR1-C2 848 - 3196084 3197611 0 2 223,364, 0,1163, -,-, 743779 LINE CR1 609 chrW 3197663 3198191 Mariner1_GG 653 - 3197663 3198191 0 2 170,358, 0,170, -,-, 743782 DNA TcMar-Mariner 609 chrW 3198188 3207112 GGLTR3C2 554 + 3198188 3207112 0 6 186,203,415,140,325,221, 0,721,929,8046,8188,8703, +,+,+,+,+,+, 743783 LTR ERVL 609 chrW 3201133 3203331 GGERVL-C-int 669 + 3201133 3203331 0 2 1951,247, 0,1951, +,+, 743786 LTR ERVL 609 chrW 3203360 3206144 GGERVL-C-int 597 - 3203360 3206144 0 2 544,2240, 0,544, -,-, 743787 LTR ERVL 609 chrW 3211445 3214612 CR1-F2 505 + 3211445 3214612 0 3 565,87,1170, 0,567,1997, +,+,+, 743796 LINE CR1 609 chrW 3221332 3230309 GGERVL-A-int 572 + 3221332 3230309 0 5 50,737,186,266,458, 0,3862,7767,8246,8519, +,+,+,+,+, 743807 LTR ERVL 609 chrW 3221388 3223807 GGERVL-A-int 524 - 3221388 3223807 0 3 986,1041,388, 0,989,2031, -,-,-, 743808 LTR ERVL 609 chrW 3226312 3229091 GGERVL18-LTR 675 + 3226312 3229091 0 2 2447,332, 0,2447, +,+, 743811 LTR ERVL 609 chrW 3230777 3242657 GGERVL-A-int 765 + 3230777 3242657 0 8 464,5831,45,473,3015,531,967,508, 0,466,6339,6384,6859,9874,10405,11372, +,+,+,+,+,+,+,+, 743815 LTR ERVL 609 chrW 3243315 3245045 GGERVL18-int 517 + 3243315 3245045 0 4 165,326,455,303, 0,165,971,1427, +,+,+,+, 743817 LTR ERVL 609 chrW 3245666 3249842 GGERVL-A-int 145 - 3245666 3249842 0 2 565,132, 0,4044, -,-, 743821 LTR ERVL 609 chrW 3255264 3255800 GGLTR3F2 793 + 3255264 3255800 0 3 51,232,203, 0,51,333, +,+,+, 743829 LTR ERVL 609 chrW 3262878 3269480 GGERVL18-int 583 + 3262878 3269480 0 4 1019,1552,2726,321, 0,1521,3551,6281, +,+,+,+, 743844 LTR ERVL 609 chrW 3265951 3266429 GGLTR3F2 690 + 3265951 3266429 0 2 231,197, 0,281, +,+, 743846 LTR ERVL 76 chrW 3269484 3280671 GGERVL-A-int 618 + 3269484 3280671 0 8 67,264,3141,254,62,646,460,363, 0,67,371,4513,4767,9718,10364,10824, +,+,+,+,+,+,+,+, 743848 LTR ERVL 76 chrW 3275534 3277522 GGERVL-C-int 781 + 3275534 3277522 0 3 1027,469,491, 0,1027,1497, +,+,+, 743853 LTR ERVL 610 chrW 3277522 3279187 GGERVL-A-int 479 - 3277522 3279187 0 2 732,379, 0,1286, -,-, 743854 LTR ERVL 610 chrW 3280670 3283464 CR1-D 404 + 3280670 3283464 0 2 691,1836, 0,958, +,+, 743856 LINE CR1 610 chrW 3291959 3292969 GGERVL-C-int 799 + 3291959 3292969 0 2 865,145, 0,865, +,+, 743864 LTR ERVL 610 chrW 3293032 3295004 GGLTR7-int 170 + 3293032 3295004 0 2 477,280, 0,1692, +,+, 743865 LTR ERV1 610 chrW 3295019 3298737 GGLTR10C-int 374 - 3295019 3298737 0 5 373,2608,140,215,373, 0,373,2981,3130,3345, -,-,-,-,-, 743866 LTR ERVK 610 chrW 3305181 3306538 GGERV10_LTR 917 + 3305181 3306538 0 2 1146,211, 0,1146, +,+, 743869 LTR ERVL 610 chrW 3363485 3368428 GGERVL-A-int 768 + 3363485 3368428 0 5 174,2777,221,1237,527, 0,178,2955,3176,4416, +,+,+,+,+, 743878 LTR ERVL 610 chrW 3374004 3376596 GGERVL-A-int 743 - 3374004 3376596 0 2 742,1850, 0,742, -,-, 743888 LTR ERVL 610 chrW 3376594 3377740 GGLTR3C2 555 + 3376594 3377740 0 3 554,191,248, 0,554,898, +,+,+, 743889 LTR ERVL 610 chrW 3378633 3379083 GGERVL18-int 532 - 3378633 3379083 0 2 172,220, 0,230, -,-, 743893 LTR ERVL 610 chrW 3379168 3380128 GGERVL18-int 554 + 3379168 3380128 0 2 711,243, 0,717, +,+, 743895 LTR ERVL 610 chrW 3381697 3382027 GGERV10_LTR 790 - 3381697 3382027 0 2 160,62, 0,268, -,-, 743897 LTR ERVL 610 chrW 3386880 3388331 GGLTR5A 389 + 3386880 3388331 0 2 395,159, 0,1292, +,+, 743900 LTR ERVL 610 chrW 3389350 3392605 CR1-C2 630 - 3389350 3392605 0 2 91,3164, 0,91, -,-, 743906 LINE CR1 610 chrW 3394300 3396759 GGERV28_I-int 177 - 3394300 3396759 0 2 311,138, 0,2321, -,-, 743907 LTR ERVK 610 chrW 3398817 3399660 GGLTR7-int 801 - 3398817 3399660 0 3 349,260,212, 0,349,631, -,-,-, 743912 LTR ERV1 610 chrW 3399898 3403639 GGERV28_I-int 66 - 3399898 3403639 0 2 1994,1383, 0,2358, -,-, 743913 LTR ERVK 76 chrW 3406197 3411234 GGERVL18-int 675 - 3406197 3411234 0 3 305,3791,941, 0,305,4096, -,-,-, 743915 LTR ERVL 611 chrW 3413584 3415481 GGERV10_LTR 799 - 3413584 3415481 0 3 160,62,1586, 0,249,311, -,-,-, 743919 LTR ERVL 611 chrW 3415481 3418943 GGLTR7A 889 - 3415481 3418943 0 2 608,2854, 0,608, -,-, 743920 LTR ERV1 611 chrW 3418943 3425297 GGERV10_LTR 830 - 3418943 3425297 0 6 220,3405,738,793,159,61, 0,220,3625,5232,6026,6293, -,-,-,-,-,-, 743921 LTR ERVL 611 chrW 3428177 3429986 GGERV28_I-int 154 - 3428177 3429986 0 2 326,355, 0,1454, -,-, 743925 LTR ERVK 611 chrW 3433487 3435593 GGLTR3B4 367 - 3433487 3435593 0 2 1537,569, 0,1537, -,-, 743928 LTR ERVL 611 chrW 3438501 3441984 GGLTR7-int 421 - 3438501 3441984 0 4 647,801,1518,311, 0,753,1640,3172, -,-,-,-, 743933 LTR ERV1 611 chrW 3442553 3452443 GGERVL-A-int 527 + 3442553 3452443 0 4 397,1201,224,766, 0,397,2193,9124, +,+,+,+, 743934 LTR ERVL 611 chrW 3444970 3451677 GGLTR3G1 559 - 3444970 3451677 0 4 601,4302,844,601, 0,601,5262,6106, -,-,-,-, 743936 LTR ERVL 611 chrW 3452431 3454196 GGLTR10C-int 574 - 3452431 3454196 0 2 1392,373, 0,1392, -,-, 743937 LTR ERVK 611 chrW 3454196 3455385 GGLTR3D 413 - 3454196 3455385 0 2 461,153, 0,1036, -,-, 743938 LTR ERVL 611 chrW 3455616 3459137 GGERVL-C-int 734 + 3455616 3459137 0 2 2238,603, 0,2918, +,+, 743941 LTR ERVL 611 chrW 3457848 3458539 CR1-H2 833 - 3457848 3458539 0 2 643,46, 0,645, -,-, 743942 LINE CR1 611 chrW 3460107 3468793 CR1-C4 729 - 3460107 3468793 0 2 544,711, 0,7975, -,-, 743945 LINE CR1 611 chrW 3460651 3468085 GGLTR7A 789 + 3460651 3468085 0 3 609,6341,484, 0,609,6950, +,+,+, 743946 LTR ERV1 611 chrW 3475276 3478674 GGERVL18-int 529 - 3475276 3478674 0 4 340,1482,23,1553, 0,340,1822,1845, -,-,-,-, 743952 LTR ERVL 611 chrW 3488762 3490432 ENS1B-LTR 715 - 3488762 3490432 0 3 180,576,694, 0,400,976, -,-,-, 743963 LTR ERVL 611 chrW 3490499 3495656 GGERVL-B-int 816 + 3490499 3495656 0 2 801,4328, 0,829, +,+, 743966 LTR ERVL 611 chrW 3495656 3496184 GGLTR3F1 918 + 3495656 3496184 0 2 36,492, 0,36, +,+, 743968 LTR ERVL 611 chrW 3497050 3498387 CR1-E 860 + 3497050 3498387 0 2 66,1149, 0,188, +,+, 743972 LINE CR1 611 chrW 3502578 3505194 GGLTR10D 945 + 3502578 3505194 0 2 347,2269, 0,347, +,+, 743980 LTR ERVK 611 chrW 3510205 3511841 CR1-F2 687 + 3510205 3511841 0 2 699,708, 0,928, +,+, 743985 LINE CR1 611 chrW 3511841 3512679 GGLTR3D 526 - 3511841 3512679 0 2 253,219, 0,619, -,-, 743987 LTR ERVL 611 chrW 3512679 3527263 GGERVL18-int 734 + 3512679 3527263 0 5 305,3599,129,1461,567, 0,305,9438,12556,14017, +,+,+,+,+, 743989 LTR ERVL 611 chrW 3516583 3521162 GGLTR3A 811 + 3516583 3521162 0 2 528,4051, 0,528, +,+, 743990 LTR ERVL 611 chrW 3527263 3528486 GGERVL18-int 659 - 3527263 3528486 0 2 361,827, 0,396, -,-, 743993 LTR ERVL 76 chrW 3530081 3540288 GGERVL18-int 655 + 3530081 3540288 0 2 1028,2643, 0,7564, +,+, 743997 LTR ERVL 611 chrW 3531112 3532275 CR1-Y 799 - 3531112 3532275 0 4 182,111,22,504, 0,182,293,659, -,-,-,-, 743998 LINE CR1 611 chrW 3532275 3537645 GGERVL-C-int 769 - 3532275 3537645 0 5 521,1372,758,1813,568, 0,524,2231,2989,4802, -,-,-,-,-, 744000 LTR ERVL 612 chrW 3541370 3541702 GGERV10_LTR 579 - 3541370 3541702 0 2 160,82, 0,250, -,-, 744005 LTR ERVL 612 chrW 3543637 3546446 GGLTR3A 759 - 3543637 3546446 0 2 2281,528, 0,2281, -,-, 744007 LTR ERVL 612 chrW 3546447 3549271 CR1-Y 694 - 3546447 3549271 0 2 128,160, 0,2664, -,-, 744008 LINE CR1 612 chrW 3546567 3549105 GGLTR3A 694 - 3546567 3549105 0 2 2022,515, 0,2023, -,-, 744009 LTR ERVL 612 chrW 3549275 3549647 GGERVL-A-int 695 + 3549275 3549647 0 2 181,177, 0,195, +,+, 744010 LTR ERVL 612 chrW 3572737 3579076 GGLTR3A 780 - 3572737 3579076 0 6 526,1238,222,2775,174,350, 0,529,1767,1989,4768,5989, -,-,-,-,-,-, 744017 LTR ERVL 612 chrW 3581530 3589307 Char12Mar1_GG 639 - 3581530 3589307 0 2 441,121, 0,7656, -,-, 744023 DNA hAT-Charlie 612 chrW 3581972 3589182 GGLTR5B 556 - 3581972 3589182 0 2 34,522, 0,6688, -,-, 744024 LTR ERVL 612 chrW 3582006 3588660 GGLTR3A 874 + 3582006 3588660 0 4 527,5508,44,527, 0,528,6080,6127, +,+,+,+, 744025 LTR ERVL 612 chrW 3594235 3596827 GGERVL-A-int 743 - 3594235 3596827 0 2 742,1850, 0,742, -,-, 744033 LTR ERVL 612 chrW 3596825 3597970 GGLTR3C2 557 + 3596825 3597970 0 3 553,191,248, 0,553,897, +,+,+, 744034 LTR ERVL 612 chrW 3598863 3599313 GGERVL18-int 528 - 3598863 3599313 0 2 172,220, 0,230, -,-, 744038 LTR ERVL 612 chrW 3599398 3600358 GGERVL18-int 554 + 3599398 3600358 0 2 711,243, 0,717, +,+, 744040 LTR ERVL 612 chrW 3601927 3602257 GGERV10_LTR 784 - 3601927 3602257 0 2 160,62, 0,268, -,-, 744042 LTR ERVL 612 chrW 3607110 3608552 GGLTR5A 389 + 3607110 3608552 0 2 395,159, 0,1283, +,+, 744045 LTR ERVL 612 chrW 3609571 3612828 CR1-C2 666 - 3609571 3612828 0 2 91,3166, 0,91, -,-, 744050 LINE CR1 612 chrW 3613049 3629237 GGLTR7-int 459 - 3613049 3629237 0 13 278,1104,1282,483,59,227,259,499,1699,71,234,320,247, 0,1144,3418,4700,5195,5308,5848,6165,6664,14532,15387,15621,15941, -,-,-,-,-,-,-,-,-,-,-,-,-, 744052 LTR ERV1 612 chrW 3621417 3627243 GGERV10_LTR 923 + 3621417 3627243 0 3 220,5385,220, 0,221,5606, +,+,+, 744055 LTR ERVL 612 chrW 3629622 3633636 GGERVL18-int 555 - 3629622 3633636 0 3 2100,253,161, 0,3239,3853, -,-,-, 744059 LTR ERVL 612 chrW 3655968 3656447 GGERVL-C-int 803 - 3655968 3656447 0 2 435,44, 0,435, -,-, 744077 LTR ERVL 612 chrW 3659516 3667764 GGERV28_I-int 755 - 3659516 3667764 0 5 479,294,116,4259,476, 0,479,2708,3513,7772, -,-,-,-,-, 744079 LTR ERVK 612 chrW 3660745 3661593 GGLTR7-int 799 - 3660745 3661593 0 3 347,268,212, 0,347,636, -,-,-, 744080 LTR ERV1 76 chrW 3667764 3670391 GGERVL-B-int 823 - 3667764 3670391 0 2 2150,475, 0,2152, -,-, 744082 LTR ERVL 613 chrW 3673405 3676179 GGLTR3B4 681 - 3673405 3676179 0 4 126,457,892,140, 0,666,1127,2634, -,-,-,-, 744083 LTR ERVL 613 chrW 3679466 3683915 GGLTR7-int 567 - 3679466 3683915 0 6 754,274,2182,90,291,126, 0,787,1318,3502,4022,4323, -,-,-,-,-,-, 744090 LTR ERV1 613 chrW 3685174 3687843 GGERVL-A-int 296 - 3685174 3687843 0 3 348,1813,398, 0,360,2271, -,-,-, 744093 LTR ERVL 613 chrW 3690325 3691329 GGLTR7-int 253 - 3690325 3691329 0 3 196,232,176, 0,433,828, -,-,-, 744096 LTR ERV1 613 chrW 3694106 3699101 GGERVL-A-int 447 - 3694106 3699101 0 2 918,253, 0,4742, -,-, 744101 LTR ERVL 613 chrW 3695329 3698853 CR1-G 663 + 3695329 3698853 0 2 1336,2040, 0,1484, +,+, 744103 LINE CR1 613 chrW 3699588 3705732 GGLTR7A 833 - 3699588 3705732 0 2 5556,588, 0,5556, -,-, 744107 LTR ERV1 613 chrW 3706239 3711226 GGERV20_I-int 709 - 3706239 3711226 0 5 1830,2350,106,160,65, 0,2195,4546,4653,4922, -,-,-,-,-, 744109 LTR ERVL 613 chrW 3711223 3713936 GGERVL-C-int 536 - 3711223 3713936 0 3 1005,1130,558, 0,1006,2155, -,-,-, 744111 LTR ERVL 613 chrW 3720337 3722152 GGERV20_I-int 558 - 3720337 3722152 0 6 268,44,807,270,161,72, 0,272,400,1212,1483,1743, -,-,-,-,-,-, 744114 LTR ERVL 613 chrW 3722328 3724481 GGERV20_I-int 439 - 3722328 3724481 0 3 389,227,975, 0,948,1178, -,-,-, 744115 LTR ERVL 613 chrW 3724486 3728612 GGLTR3B3 720 - 3724486 3728612 0 3 84,53,3987, 0,86,139, -,-,-, 744117 LTR ERVL 613 chrW 3728612 3738194 GGLTR7-int 482 - 3728612 3738194 0 6 44,536,2175,55,442,708, 0,4783,5327,7908,8197,8874, -,-,-,-,-,-, 744118 LTR ERV1 613 chrW 3728656 3733395 GGERV10_LTR 963 - 3728656 3733395 0 4 220,911,3387,220, 0,220,1131,4519, -,-,-,-, 744119 LTR ERVL 613 chrW 3738425 3739384 GGERVL-B-int 689 - 3738425 3739384 0 3 621,125,196, 0,638,763, -,-,-, 744121 LTR ERVL 613 chrW 3739381 3741248 GGLTR3B2 605 - 3739381 3741248 0 2 1347,520, 0,1347, -,-, 744122 LTR ERVL 613 chrW 3741809 3747715 CR1-C4 445 + 3741809 3747715 0 3 730,380,477, 0,1102,5429, +,+,+, 744125 LINE CR1 613 chrW 3743618 3747027 GGERVL18-int 626 - 3743618 3747027 0 2 339,3070, 0,339, -,-, 744129 LTR ERVL 613 chrW 3747990 3761360 GGERVL18-int 604 - 3747990 3761360 0 8 112,36,1010,194,851,307,208,197, 0,112,6128,10437,11188,12120,12691,13173, -,-,-,-,-,-,-,-, 744131 LTR ERVL 613 chrW 3748138 3754118 GGERVL-B-int 800 - 3748138 3754118 0 3 4536,736,486, 0,4754,5494, -,-,-, 744132 LTR ERVL 613 chrW 3755854 3756204 GGERVK1-int 337 - 3755854 3756204 0 2 117,64, 0,286, -,-, 744134 LTR ERVK 613 chrW 3764691 3767170 GGERVL-C-int 592 - 3764691 3767170 0 2 501,1978, 0,501, -,-, 744142 LTR ERVL 613 chrW 3770393 3775777 GGERVL-A-int 544 - 3770393 3775777 0 4 209,3061,434,535, 0,209,4415,4849, -,-,-,-, 744149 LTR ERVL 613 chrW 3773199 3774808 GGLTR3B1 664 - 3773199 3774808 0 2 1113,496, 0,1113, -,-, 744150 LTR ERVL 613 chrW 3778707 3778799 GGERV21_LTR 718 + 3778707 3778799 0 2 46,46, 0,46, +,+, 744155 LTR ERVL 613 chrW 3778753 3779028 GGERV10_LTR 397 + 3778753 3779028 0 2 18,162, 0,113, +,+, 744156 LTR ERVL 613 chrW 3779747 3785653 CR1-C4 445 - 3779747 3785653 0 3 477,380,730, 0,4424,5176, -,-,-, 744157 LINE CR1 613 chrW 3780435 3783844 GGERVL18-int 626 + 3780435 3783844 0 2 3070,339, 0,3070, +,+, 744159 LTR ERVL 613 chrW 3790326 3790651 GGLTR5B 446 + 3790326 3790651 0 2 157,63, 0,262, +,+, 744166 LTR ERVL 76 chrW 3794130 3803977 GGERVL-A-int 447 + 3794130 3803977 0 2 1317,265, 0,9582, +,+, 744172 LTR ERVL 76 chrW 3795632 3802847 GGERVL18-int 496 - 3795632 3802847 0 5 238,226,3023,1003,226, 0,238,2423,5983,6989, -,-,-,-,-, 744174 LTR ERVL 613 chrW 3796097 3798057 CR1-C 854 + 3796097 3798057 0 2 1117,843, 0,1117, +,+, 744175 LINE CR1 614 chrW 3804687 3807345 GGERVL-C-int 502 + 3804687 3807345 0 4 535,437,80,1528, 0,535,1050,1130, +,+,+,+, 744180 LTR ERVL 614 chrW 3807457 3808221 GGERV20_I-int 276 + 3807457 3808221 0 2 133,121, 0,643, +,+, 744182 LTR ERVL 614 chrW 3808221 3809326 GGLTR3C2 646 - 3808221 3809326 0 2 414,127, 0,978, -,-, 744184 LTR ERVL 614 chrW 3809561 3809884 GGERV10_LTR 524 - 3809561 3809884 0 2 158,68, 0,255, -,-, 744186 LTR ERVL 614 chrW 3811100 3813833 GGLTR7B 388 - 3811100 3813833 0 4 58,104,1592,212, 0,165,881,2521, -,-,-,-, 744187 LTR ERV1 614 chrW 3813926 3815094 CR1-H 758 - 3813926 3815094 0 2 633,535, 0,633, -,-, 744190 LINE CR1 614 chrW 3818787 3834377 ENS1-int 735 + 3818787 3834377 0 5 37,317,1010,359,72, 0,41,6376,15159,15518, +,+,+,+,+, 744195 LTR ERVL 614 chrW 3819149 3825163 GGLTR3F1 853 + 3819149 3825163 0 5 232,81,5335,59,112, 0,411,494,5829,5902, +,+,+,+,+, 744196 LTR ERVL 614 chrW 3826173 3829259 GGLTR7-int 548 - 3826173 3829259 0 3 42,1488,557, 0,946,2529, -,-,-, 744199 LTR ERV1 614 chrW 3826217 3826779 GGLTR12A 773 + 3826217 3826779 0 2 257,305, 0,257, +,+, 744200 LTR ERVL 614 chrW 3834375 3840224 CR1-Y4 681 + 3834375 3840224 0 2 840,888, 0,4961, +,+, 744206 LINE CR1 614 chrW 3835326 3838650 GGERVL-A-int 812 - 3835326 3838650 0 2 1525,1319, 0,2005, -,-, 744208 LTR ERVL 614 chrW 3836851 3837331 GGLTR3F2 902 + 3836851 3837331 0 2 234,201, 0,279, +,+, 744209 LTR ERVL 614 chrW 3840226 3854513 CR1-F 577 + 3840226 3854513 0 2 92,92, 0,14195, +,+, 744213 LINE CR1 614 chrW 3840339 3844991 GGLTR3A 827 + 3840339 3844991 0 2 526,4126, 0,526, +,+, 744214 LTR ERVL 614 chrW 3850794 3851630 GGLTR7-int 591 + 3850794 3851630 0 3 206,274,350, 0,211,486, +,+,+, 744216 LTR ERV1 614 chrW 3852520 3854308 GGLTR3A 861 + 3852520 3854308 0 2 1261,527, 0,1261, +,+, 744217 LTR ERVL 614 chrW 3854648 3855397 GGLTR3B1 715 + 3854648 3855397 0 2 503,246, 0,503, +,+, 744219 LTR ERVL 614 chrW 3855445 3859029 GGERVL-C-int 699 + 3855445 3859029 0 7 546,342,568,512,322,92,77, 0,1634,2013,2581,3093,3415,3507, +,+,+,+,+,+,+, 744220 LTR ERVL 614 chrW 3859040 3868692 GGLTR7-int 500 + 3859040 3868692 0 9 341,1083,1310,475,610,310,874,56,597, 0,343,2636,4203,5316,6904,7638,8999,9055, +,+,+,+,+,+,+,+,+, 744223 LTR ERV1 614 chrW 3868693 3869636 (CACTC)n 397 + 3868693 3869636 0 3 541,190,181, 0,556,762, +,+,+, 744232 Simple_repeat Simple_repeat 614 chrW 3869820 3870922 (CACTC)n 508 + 3869820 3870922 0 4 180,483,180,180, 0,207,723,922, +,+,+,+, 744233 Simple_repeat Simple_repeat 614 chrW 3872667 3873852 CR1-G 877 - 3872667 3873852 0 3 433,60,334, 0,433,851, -,-,-, 744241 LINE CR1 614 chrW 3892262 3900995 GGLTR7-int 857 - 3892262 3900995 0 3 485,5106,611, 0,3016,8122, -,-,-, 744242 LTR ERV1 614 chrW 3904914 3909818 GGERV20_I-int 470 - 3904914 3909818 0 3 126,80,264, 0,516,4640, -,-,-, 744248 LTR ERVL 614 chrW 3910664 3911248 GGLTR11 612 + 3910664 3911248 0 2 60,486, 0,98, +,+, 744255 LTR ERV1 614 chrW 3914781 3916829 CR1-E 823 + 3914781 3916829 0 2 691,793, 0,1255, +,+, 744258 LINE CR1 614 chrW 3927612 3928616 GGERVL18-LTR 735 + 3927612 3928616 0 2 662,342, 0,662, +,+, 744271 LTR ERVL 76 chrW 3930783 3937115 GGLTR3B4 539 - 3930783 3937115 0 2 94,414, 0,5918, -,-, 744275 LTR ERVL 615 chrW 3933606 3935413 CR1-E 685 + 3933606 3935413 0 2 657,547, 0,1260, +,+, 744279 LINE CR1 615 chrW 3937285 3945184 GGERVL-A-int 754 + 3937285 3945184 0 5 279,252,1218,732,1389, 0,884,1136,5778,6510, +,+,+,+,+, 744283 LTR ERVL 615 chrW 3939644 3943057 GGLTR10C1 875 + 3939644 3943057 0 3 363,2687,363, 0,363,3050, +,+,+, 744285 LTR ERVK 615 chrW 3945187 3947291 GGLTR3A 893 + 3945187 3947291 0 2 1578,526, 0,1578, +,+, 744286 LTR ERVL 615 chrW 3947291 3948735 CR1-Y 688 + 3947291 3948735 0 2 614,306, 0,1138, +,+, 744287 LINE CR1 615 chrW 3949031 3954494 GGLTR7-int 436 + 3949031 3954494 0 6 325,428,869,2696,396,330, 0,327,995,1872,4568,5133, +,+,+,+,+,+, 744289 LTR ERV1 615 chrW 3960091 3962643 CR1-C2 700 + 3960091 3962643 0 2 813,1131, 0,1421, +,+, 744293 LINE CR1 615 chrW 3964301 3964887 GGLTR3G1 278 + 3964301 3964887 0 2 347,207, 0,379, +,+, 744298 LTR ERVL 615 chrW 3977008 3979026 GGERV28_I-int 291 + 3977008 3979026 0 2 796,70, 0,1948, +,+, 744310 LTR ERVK 615 chrW 3979292 3980112 GGLTR7B 479 + 3979292 3980112 0 2 343,475, 0,345, +,+, 744311 LTR ERV1 615 chrW 3981981 3984381 GGERV28_I-int 139 - 3981981 3984381 0 2 697,540, 0,1860, -,-, 744314 LTR ERVK 615 chrW 3984395 3985248 GGLTR7-int 821 - 3984395 3985248 0 3 351,278,223, 0,352,630, -,-,-, 744316 LTR ERV1 615 chrW 3988148 3989257 GGERVL-A-int 762 - 3988148 3989257 0 3 500,107,500, 0,500,609, -,-,-, 744322 LTR ERVL 615 chrW 3989274 3992653 GGLTR7A 893 - 3989274 3992653 0 2 238,3141, 0,238, -,-, 744323 LTR ERV1 615 chrW 3998457 4000000 GGERVL-B-int 775 + 3998457 4000000 0 2 479,1062, 0,481, +,+, 744329 LTR ERVL 615 chrW 4002325 4003999 GGLTR3F2 814 + 4002325 4003999 0 2 1189,478, 0,1196, +,+, 744331 LTR ERVL 615 chrW 4003999 4007375 GGERV30_LTR 647 - 4003999 4007375 0 2 3065,311, 0,3065, -,-, 744332 LTR ERVL 615 chrW 4007859 4009069 GGERV28_I-int 307 + 4007859 4009069 0 4 554,95,132,77, 0,722,853,1133, +,+,+,+, 744333 LTR ERVK 615 chrW 4011232 4016803 GGERV20_I-int 779 - 4011232 4016803 0 5 1459,2725,37,159,76, 0,1459,5206,5244,5495, -,-,-,-,-, 744336 LTR ERVL 615 chrW 4015416 4016437 GGLTR3F1 824 + 4015416 4016437 0 2 360,134, 0,887, +,+, 744337 LTR ERVL 615 chrW 4020266 4022371 GGERV20_I-int 642 - 4020266 4022371 0 2 114,70, 0,2035, -,-, 744341 LTR ERVL 615 chrW 4020380 4022179 GGERVL-C-int 565 + 4020380 4022179 0 3 609,188,988, 0,616,811, +,+,+, 744342 LTR ERVL 615 chrW 4025444 4028481 GGERVL18-int 682 + 4025444 4028481 0 3 316,101,2612, 0,324,425, +,+,+, 744347 LTR ERVL 615 chrW 4028978 4035266 GGERVL-B-int 819 + 4028978 4035266 0 4 70,464,5280,472, 0,70,536,5816, +,+,+,+, 744349 LTR ERVL 615 chrW 4035266 4042743 GGERVL18-int 679 + 4035266 4042743 0 3 1076,2327,116, 0,4712,7361, +,+,+, 744350 LTR ERVL 615 chrW 4045778 4048571 GGLTR3A 910 + 4045778 4048571 0 2 238,108, 0,2685, +,+, 744357 LTR ERVL 615 chrW 4049095 4050995 CR1-G 840 - 4049095 4050995 0 2 78,1212, 0,688, -,-, 744359 LINE CR1 615 chrW 4054079 4062927 GGERVL-B-int 625 + 4054079 4062927 0 7 298,1693,749,851,79,120,97, 0,854,2551,3633,4933,5012,8751, +,+,+,+,+,+,+, 744364 LTR ERVL 615 chrW 4059452 4062820 GGLTR10D 949 - 4059452 4062820 0 3 343,2682,343, 0,343,3025, -,-,-, 744370 LTR ERVK 616 chrW 4074679 4079454 CR1-F2 622 - 4074679 4079454 0 4 403,744,1029,149, 0,417,3597,4626, -,-,-,-, 744377 LINE CR1 616 chrW 4075835 4078274 CR1-C 888 + 4075835 4078274 0 2 2063,374, 0,2065, +,+, 744378 LINE CR1 616 chrW 4089188 4095045 GGERV20_I-int 651 - 4089188 4095045 0 3 45,360,825, 0,47,5032, -,-,-, 744391 LTR ERVL 616 chrW 4089595 4094209 GGLTR3A 776 + 4089595 4094209 0 2 530,4084, 0,530, +,+, 744392 LTR ERVL 616 chrW 4095660 4097448 GGERVL-C-int 878 - 4095660 4097448 0 2 527,1261, 0,527, -,-, 744394 LTR ERVL 616 chrW 4097447 4099390 GGLTR3A 727 - 4097447 4099390 0 2 1418,525, 0,1418, -,-, 744395 LTR ERVL 616 chrW 4101871 4103764 GGLTR11-int 172 + 4101871 4103764 0 2 799,509, 0,1384, +,+, 744396 LTR ERV1 616 chrW 4107100 4107872 GGLTR7A 775 - 4107100 4107872 0 4 252,260,196,42, 0,252,534,730, -,-,-,-, 744399 LTR ERV1 616 chrW 4108110 4111860 GGERV28_I-int 155 - 4108110 4111860 0 3 1992,376,740, 0,2306,3010, -,-,-, 744400 LTR ERVK 616 chrW 4113972 4119059 GGERVL-B-int 729 + 4113972 4119059 0 3 112,843,340, 0,647,4747, +,+,+, 744402 LTR ERVL 616 chrW 4115838 4118720 GGLTR7B 240 + 4115838 4118720 0 2 302,2580, 0,302, +,+, 744404 LTR ERV1 616 chrW 4119414 4120980 GGERVL-A-int 846 + 4119414 4120980 0 2 124,511, 0,1055, +,+, 744406 LTR ERVL 616 chrW 4123266 4123886 GGERVL-C-int 673 + 4123266 4123886 0 2 84,536, 0,84, +,+, 744411 LTR ERVL 616 chrW 4125908 4137413 GGERVL-C-int 632 + 4125908 4137413 0 4 664,336,1737,528, 0,7296,9240,10977, +,+,+,+, 744412 LTR ERVL 616 chrW 4126576 4129408 GGERVL-C-int 869 - 4126576 4129408 0 2 525,2307, 0,525, -,-, 744413 LTR ERVL 616 chrW 4129402 4133196 GGLTR3A 756 - 4129402 4133196 0 2 3264,529, 0,3265, -,-, 744414 LTR ERVL 616 chrW 4133984 4135151 GGERVL-B-int 681 + 4133984 4135151 0 2 569,598, 0,569, +,+, 744416 LTR ERVL 616 chrW 4137689 4141447 GGERVL-B-int 799 - 4137689 4141447 0 4 1013,675,1118,463, 0,1013,2175,3295, -,-,-,-, 744418 LTR ERVL 616 chrW 4141447 4143836 GGERVL-B-int 763 + 4141447 4143836 0 4 972,642,203,572, 0,972,1614,1817, +,+,+,+, 744420 LTR ERVL 616 chrW 4146958 4149122 CR1-F 869 - 4146958 4149122 0 2 1723,438, 0,1726, -,-, 744426 LINE CR1 616 chrW 4149122 4156457 GGLTR7-int 749 - 4149122 4156457 0 5 582,319,3820,1839,610, 0,590,1066,4886,6725, -,-,-,-,-, 744427 LTR ERV1 616 chrW 4161021 4163289 GGERVL18-int 778 + 4161021 4163289 0 2 2125,139, 0,2129, +,+, 744433 LTR ERVL 616 chrW 4163537 4169151 ENS3-int 754 + 4163537 4169151 0 3 565,927,1771, 0,1060,3843, +,+,+, 744435 LTR ERVL 616 chrW 4164102 4164597 GGLTR3F2 646 + 4164102 4164597 0 2 230,218, 0,277, +,+, 744436 LTR ERVL 616 chrW 4165521 4167382 GGLTR3B1 775 + 4165521 4167382 0 2 1448,413, 0,1448, +,+, 744438 LTR ERVL 616 chrW 4169151 4173603 GGLTR3C1 650 + 4169151 4173603 0 5 108,415,1684,656,495, 0,1199,1614,3301,3957, +,+,+,+,+, 744439 LTR ERVL 616 chrW 4169250 4170350 GGLTR7A 559 + 4169250 4170350 0 2 68,538, 0,562, +,+, 744440 LTR ERV1 616 chrW 4180491 4184499 CR1-Y2_Aves 543 + 4180491 4184499 0 2 91,188, 0,3820, +,+, 744447 LINE CR1 616 chrW 4188681 4190178 CR1-F2 580 + 4188681 4190178 0 2 746,751, 0,746, +,+, 744458 LINE CR1 616 chrW 4191638 4193016 CR1-C3 728 + 4191638 4193016 0 2 612,766, 0,612, +,+, 744459 LINE CR1 9 chrW 4193154 4195067 CR1-F2 868 + 4193154 4195067 0 2 1469,444, 0,1469, +,+, 744460 LINE CR1 617 chrW 4196276 4203169 GGERVL-A-int 621 + 4196276 4203169 0 5 546,199,5842,45,186, 0,546,778,6662,6707, +,+,+,+,+, 744466 LTR ERVL 617 chrW 4205416 4205918 CR1-C 429 + 4205416 4205918 0 3 171,113,153, 0,210,349, +,+,+, 744470 LINE CR1 617 chrW 4206445 4207702 GGERVL-B-int 294 - 4206445 4207702 0 2 670,454, 0,803, -,-, 744473 LTR ERVL 617 chrW 4212978 4217387 GGERVL-B-int 395 + 4212978 4217387 0 3 194,417,303, 0,263,4106, +,+,+, 744478 LTR ERVL 617 chrW 4217382 4222712 GGERVL-B-int 847 + 4217382 4222712 0 2 150,5178, 0,152, +,+, 744482 LTR ERVL 617 chrW 4226424 4226974 CR1-C2 756 + 4226424 4226974 0 2 180,370, 0,180, +,+, 744486 LINE CR1 617 chrW 4227558 4233985 GGERVL-B-int 435 - 4227558 4233985 0 3 1993,161,1950, 0,3785,4477, -,-,-, 744488 LTR ERVL 617 chrW 4238327 4239125 Mariner1b_GG 713 - 4238327 4239125 0 2 203,160, 0,638, -,-, 744497 DNA TcMar-Mariner 617 chrW 4241301 4241965 Mariner1b_GG 654 - 4241301 4241965 0 2 85,142, 0,522, -,-, 744501 DNA TcMar-Mariner 617 chrW 4242602 4246459 CR1-C 820 - 4242602 4246459 0 2 2135,1722, 0,2135, -,-, 744504 LINE CR1 617 chrW 4246523 4248413 GGERVL-B-int 244 + 4246523 4248413 0 3 209,454,670, 0,633,1220, +,+,+, 744505 LTR ERVL 617 chrW 4249070 4249443 CR1-Y2_Aves 220 - 4249070 4249443 0 2 24,171, 0,202, -,-, 744509 LINE CR1 617 chrW 4251927 4253505 CR1-E 728 + 4251927 4253505 0 2 184,1105, 0,473, +,+, 744513 LINE CR1 617 chrW 4254439 4262345 GGLTR7A 791 + 4254439 4262345 0 4 66,1015,209,260, 0,6422,7437,7646, +,+,+,+, 744515 LTR ERV1 617 chrW 4254505 4255032 GGLTR3F1 899 - 4254505 4255032 0 2 491,36, 0,491, -,-, 744516 LTR ERVL 617 chrW 4255032 4260861 GGLTR3F1 851 - 4255032 4260861 0 2 5338,489, 0,5340, -,-, 744517 LTR ERVL 617 chrW 4262345 4263630 GGERV10_LTR 644 + 4262345 4263630 0 3 981,62,160, 0,981,1125, +,+,+, 744518 LTR ERVL 617 chrW 4263914 4278601 GGERVL18-int 668 - 4263914 4278601 0 5 289,443,1403,159,2221, 0,293,1703,3406,12466, -,-,-,-,-, 744520 LTR ERVL 617 chrW 4267881 4273048 GGERV10_LTR 921 - 4267881 4273048 0 2 220,4947, 0,220, -,-, 744523 LTR ERVL 617 chrW 4273401 4276297 GGLTR10C-int 505 + 4273401 4276297 0 2 2611,285, 0,2611, +,+, 744525 LTR ERVK 617 chrW 4278601 4286832 GGLTR11 471 - 4278601 4286832 0 3 287,281,412, 0,7538,7819, -,-,-, 744526 LTR ERV1 617 chrW 4278888 4286139 GGLTR3F2 800 + 4278888 4286139 0 5 312,179,198,5123,497, 0,1227,1408,1631,6754, +,+,+,+,+, 744527 LTR ERVL 617 chrW 4288364 4291229 CR1-Y 816 - 4288364 4291229 0 3 280,1961,266, 0,638,2599, -,-,-, 744530 LINE CR1 617 chrW 4296835 4298005 GGLTR3G2 532 + 4296835 4298005 0 2 447,93, 0,1077, +,+, 744540 LTR ERVL 617 chrW 4308023 4311776 CR1-C4 570 + 4308023 4311776 0 3 1169,980,295, 0,1883,3458, +,+,+, 744549 LINE CR1 617 chrW 4315146 4316923 GGERVL-B-int 623 + 4315146 4316923 0 4 131,332,72,1242, 0,131,463,535, +,+,+,+, 744555 LTR ERVL 617 chrW 4316923 4318848 GGLTR3A 841 + 4316923 4318848 0 2 348,50, 0,1875, +,+, 744556 LTR ERVL 617 chrW 4317307 4318799 GGERVL-A-int 717 + 4317307 4318799 0 2 1018,458, 0,1034, +,+, 744557 LTR ERVL 617 chrW 4320640 4323828 GGERVL-B-int 381 - 4320640 4323828 0 4 473,361,87,147, 0,473,880,3041, -,-,-,-, 744562 LTR ERVL 617 chrW 4324325 4324965 GGLTR11-int 572 + 4324325 4324965 0 2 129,226, 0,414, +,+, 744564 LTR ERV1 618 chrW 4326022 4326205 GGLTR3D 646 - 4326022 4326205 0 2 118,65, 0,118, -,-, 744567 LTR ERVL 618 chrW 4326205 4329088 GGLTR5A 428 - 4326205 4329088 0 2 223,255, 0,2628, -,-, 744568 LTR ERVL 618 chrW 4327688 4328790 CR1-D2 846 + 4327688 4328790 0 2 955,147, 0,955, +,+, 744571 LINE CR1 618 chrW 4330757 4334714 GGERVL-B-int 735 + 4330757 4334714 0 3 67,1772,1372, 0,67,2585, +,+,+, 744574 LTR ERVL 618 chrW 4334712 4339326 GGERVL18-int 617 + 4334712 4339326 0 3 1777,2193,315, 0,2102,4299, +,+,+, 744576 LTR ERVL 618 chrW 4336488 4336814 GGERV10_LTR 855 + 4336488 4336814 0 2 63,159, 0,167, +,+, 744577 LTR ERVL 618 chrW 4339327 4340938 GGERVL-C-int 624 + 4339327 4340938 0 2 1098,513, 0,1098, +,+, 744578 LTR ERVL 618 chrW 4344611 4346276 GGERVL-B-int 392 - 4344611 4346276 0 2 112,1120, 0,545, -,-, 744582 LTR ERVL 618 chrW 4346998 4349853 CR1-Y 568 - 4346998 4349853 0 4 729,457,45,260, 0,1607,2550,2595, -,-,-,-, 744587 LINE CR1 618 chrW 4347731 4348608 CR1-H 804 + 4347731 4348608 0 2 141,101, 0,776, +,+, 744588 LINE CR1 618 chrW 4349850 4351477 GGERVL-A-int 284 - 4349850 4351477 0 5 309,160,247,247,293, 0,311,471,832,1334, -,-,-,-,-, 744591 LTR ERVL 618 chrW 4351580 4357358 GGERV10_LTR 713 + 4351580 4357358 0 3 189,5382,206, 0,190,5572, +,+,+, 744592 LTR ERVL 618 chrW 4357744 4365304 GGLTR7A 847 + 4357744 4365304 0 3 587,6364,596, 0,587,6964, +,+,+, 744593 LTR ERV1 618 chrW 4368869 4369585 GGLTR11-int 613 + 4368869 4369585 0 2 116,224, 0,492, +,+, 744595 LTR ERV1 618 chrW 4372409 4380163 GGERVL-A-int 611 + 4372409 4380163 0 4 496,1163,1646,888, 0,496,5188,6866, +,+,+,+, 744598 LTR ERVL 618 chrW 4374064 4377599 CR1-C 872 + 4374064 4377599 0 2 1824,1711, 0,1824, +,+, 744599 LINE CR1 618 chrW 4383504 4389329 GGERV10_LTR 955 + 4383504 4389329 0 3 220,5384,220, 0,221,5605, +,+,+, 744602 LTR ERVL 618 chrW 4390072 4394010 GGERVL-B-int 837 + 4390072 4394010 0 3 282,3123,529, 0,286,3409, +,+,+, 744604 LTR ERVL 618 chrW 4394010 4398394 GGERVL18-int 648 + 4394010 4398394 0 2 3299,619, 0,3765, +,+, 744605 LTR ERVL 618 chrW 4401242 4404041 CR1-C3 671 + 4401242 4404041 0 2 682,1009, 0,1790, +,+, 744611 LINE CR1 618 chrW 4408944 4409693 GGLTR5A 500 - 4408944 4409693 0 2 108,77, 0,672, -,-, 744619 LTR ERVL 618 chrW 4417526 4418689 GGERV28_I-int 211 + 4417526 4418689 0 2 137,311, 0,852, +,+, 744631 LTR ERVK 618 chrW 4423787 4426876 GGLTR7-int 614 + 4423787 4426876 0 3 1799,968,73, 0,2048,3016, +,+,+, 744640 LTR ERV1 618 chrW 4429868 4444881 GGLTR7-int 641 + 4429868 4444881 0 8 212,260,347,541,124,477,5567,584, 0,234,494,1849,2897,7946,8862,14429, +,+,+,+,+,+,+,+, 744644 LTR ERV1 618 chrW 4434311 4436119 EAVHP_I-int 737 + 4434311 4436119 0 3 1008,514,286, 0,1008,1522, +,+,+, 744646 LTR ERVK 618 chrW 4436757 4437520 GGLTR7B 328 - 4436757 4437520 0 2 321,270, 0,493, -,-, 744648 LTR ERV1 618 chrW 4445783 4446966 GGERVL-C-int 692 + 4445783 4446966 0 2 138,710, 0,473, +,+, 744652 LTR ERVL 618 chrW 4448303 4450876 GGERVL-C-int 729 + 4448303 4450876 0 2 1958,615, 0,1958, +,+, 744656 LTR ERVL 619 chrW 4458440 4460773 CR1-D 645 + 4458440 4460773 0 2 159,1720, 0,613, +,+, 744665 LINE CR1 619 chrW 4462604 4465065 GGERVL-C-int 803 - 4462604 4465065 0 2 508,1953, 0,508, -,-, 744670 LTR ERVL 619 chrW 4465593 4469954 GGLTR3B1 771 - 4465593 4469954 0 2 3836,525, 0,3836, -,-, 744672 LTR ERVL 619 chrW 4474633 4477998 GGLTR7-int 519 - 4474633 4477998 0 4 343,816,339,309, 0,509,1614,3056, -,-,-,-, 744681 LTR ERV1 619 chrW 4477994 4478713 GGLTR7B 393 - 4477994 4478713 0 2 124,437, 0,282, -,-, 744683 LTR ERV1 619 chrW 4479067 4480217 GGLTR11-int 164 - 4479067 4480217 0 2 231,787, 0,363, -,-, 744684 LTR ERV1 619 chrW 4480849 4486104 CR1-E 617 + 4480849 4486104 0 3 694,82,855, 0,3759,4400, +,+,+, 744686 LINE CR1 619 chrW 4487556 4490603 GGLTR7A 617 - 4487556 4490603 0 6 124,541,347,260,196,42, 0,631,2180,2527,2809,3005, -,-,-,-,-,-, 744693 LTR ERV1 619 chrW 4490841 4494500 GGERV28_I-int 76 - 4490841 4494500 0 2 1994,1350, 0,2309, -,-, 744694 LTR ERVK 619 chrW 4498065 4499999 GGLTR7-int 311 + 4498065 4499999 0 4 257,116,110,1241, 0,257,373,693, +,+,+,+, 744698 LTR ERV1 619 chrW 4500304 4501930 GGLTR7-int 278 + 4500304 4501930 0 3 509,222,491, 0,672,1135, +,+,+, 744699 LTR ERV1 619 chrW 4507201 4510150 GGLTR3F1 833 + 4507201 4510150 0 2 493,2455, 0,494, +,+, 744706 LTR ERVL 619 chrW 4510959 4530999 GGERV28_I-int 330 + 4510959 4530999 0 4 598,140,108,65, 0,930,19400,19975, +,+,+,+, 744707 LTR ERVK 619 chrW 4513169 4517303 GGERVL-A-int 541 + 4513169 4517303 0 3 89,873,339, 0,89,3795, +,+,+, 744709 LTR ERVL 619 chrW 4517308 4519912 GGERVL18-int 702 - 4517308 4519912 0 5 230,116,587,121,436, 0,816,932,2047,2168, -,-,-,-,-, 744712 LTR ERVL 619 chrW 4520579 4528314 GGERVL18-int 830 + 4520579 4528314 0 2 1774,250, 0,7485, +,+, 744715 LTR ERVL 619 chrW 4522348 4528064 GGERV10_LTR 841 + 4522348 4528064 0 3 223,5272,220, 0,224,5496, +,+,+, 744716 LTR ERVL 619 chrW 4531968 4532924 GGLTR7-int 820 + 4531968 4532924 0 4 223,267,264,189, 0,236,503,767, +,+,+,+, 744720 LTR ERV1 619 chrW 4534150 4540056 GGLTR7-int 630 + 4534150 4540056 0 6 327,311,224,437,3981,174, 0,329,640,1303,1751,5732, +,+,+,+,+,+, 744723 LTR ERV1 619 chrW 4540063 4543579 GGLTR10C1 715 + 4540063 4543579 0 3 359,2741,376, 0,399,3140, +,+,+, 744724 LTR ERVK 619 chrW 4544946 4547039 GGLTR7B 375 + 4544946 4547039 0 2 74,247, 0,1846, +,+, 744728 LTR ERV1 619 chrW 4545741 4546409 GGLTR7-int 334 - 4545741 4546409 0 2 102,471, 0,197, -,-, 744730 LTR ERV1 619 chrW 4547041 4548934 GGLTR7-int 439 - 4547041 4548934 0 3 548,769,72, 0,548,1821, -,-,-, 744731 LTR ERV1 620 chrW 4594125 4597625 GGLTR10C2 515 - 4594125 4597625 0 3 375,2750,375, 0,375,3125, -,-,-, 744735 LTR ERVK 620 chrW 4597692 4603921 GGLTR3F2 812 + 4597692 4603921 0 2 246,132, 0,6097, +,+, 744737 LTR ERVL 620 chrW 4600398 4603790 GGERVL-B-int 823 + 4600398 4603790 0 2 955,2060, 0,1332, +,+, 744744 LTR ERVL 620 chrW 4604821 4605150 GGERV10_LTR 630 - 4604821 4605150 0 2 159,63, 0,266, -,-, 744747 LTR ERVL 620 chrW 4605144 4610696 GGERVL-C-int 764 - 4605144 4610696 0 2 840,635, 0,4917, -,-, 744748 LTR ERVL 620 chrW 4606617 4610054 GGERVL-A-int 778 - 4606617 4610054 0 2 1966,1471, 0,1966, -,-, 744750 LTR ERVL 620 chrW 4610695 4613331 GGERVL-A-int 538 - 4610695 4613331 0 3 1199,416,538, 0,1682,2098, -,-,-, 744751 LTR ERVL 620 chrW 4611894 4612377 GGLTR3F2 844 + 4611894 4612377 0 2 231,222, 0,261, +,+, 744752 LTR ERVL 620 chrW 4613331 4615125 GGERVL18-int 692 + 4613331 4615125 0 4 148,503,788,346, 0,153,656,1448, +,+,+,+, 744754 LTR ERVL 620 chrW 4615125 4615464 GGLTR3D 511 + 4615125 4615464 0 2 151,188, 0,151, +,+, 744755 LTR ERVL 620 chrW 4615468 4616483 GGLTR3B4 485 - 4615468 4616483 0 3 174,345,202, 0,174,813, -,-,-, 744756 LTR ERVL 620 chrW 4617272 4618488 GGERV10_LTR 802 + 4617272 4618488 0 4 63,160,791,86, 0,178,339,1130, +,+,+,+, 744758 LTR ERVL 620 chrW 4618496 4621919 GGERV20_I-int 882 - 4618496 4621919 0 4 54,201,3007,160, 0,54,255,3263, -,-,-,-, 744760 LTR ERVL 620 chrW 4622861 4623711 GGLTR7-int 765 - 4622861 4623711 0 3 355,262,217, 0,355,633, -,-,-, 744761 LTR ERV1 620 chrW 4623949 4627584 GGERV28_I-int 160 - 4623949 4627584 0 3 1994,375,629, 0,2306,3006, -,-,-, 744762 LTR ERVK 620 chrW 4630028 4631232 ENS3-int 456 - 4630028 4631232 0 2 884,320, 0,884, -,-, 744766 LTR ERVL 620 chrW 4631231 4631634 GGERVL-C-int 591 - 4631231 4631634 0 2 253,150, 0,253, -,-, 744767 LTR ERVL 620 chrW 4631641 4636010 GGLTR3E1 610 - 4631641 4636010 0 3 3606,217,173, 0,3608,4196, -,-,-, 744768 LTR ERVL 620 chrW 4648801 4660394 GGLTR7A 883 - 4648801 4660394 0 6 40,239,609,427,4376,72, 0,40,279,888,7141,11521, -,-,-,-,-,-, 744787 LTR ERV1 620 chrW 4650116 4655942 GGERV10_LTR 929 - 4650116 4655942 0 3 220,5385,220, 0,220,5606, -,-,-, 744788 LTR ERVL 620 chrW 4660607 4667763 GGERV28_I-int 191 - 4660607 4667763 0 2 324,436, 0,6720, -,-, 744789 LTR ERVK 620 chrW 4661622 4664799 GGERVL-B-int 813 + 4661622 4664799 0 2 481,2694, 0,483, +,+, 744790 LTR ERVL 620 chrW 4664799 4666820 GGLTR3F2 897 + 4664799 4666820 0 2 1539,482, 0,1539, +,+, 744791 LTR ERVL 620 chrW 4669348 4672158 GGERV28_I-int 610 - 4669348 4672158 0 4 477,294,61,133, 0,477,2455,2677, -,-,-,-, 744792 LTR ERVK 620 chrW 4670571 4671419 GGLTR7-int 797 - 4670571 4671419 0 3 352,260,217, 0,353,631, -,-,-, 744793 LTR ERV1 620 chrW 4672847 4677498 GGERV28_LTR 788 - 4672847 4677498 0 2 4211,440, 0,4211, -,-, 744794 LTR ERVK 620 chrW 4677498 4678486 GGERVL-C-int 771 + 4677498 4678486 0 3 376,92,494, 0,402,494, +,+,+, 744795 LTR ERVL 620 chrW 4679973 4685266 CR1-C3 477 - 4679973 4685266 0 2 34,503, 0,4790, -,-, 744798 LINE CR1 620 chrW 4680265 4684763 GGERVL-B-int 825 - 4680265 4684763 0 3 1333,2674,486, 0,1336,4012, -,-,-, 744800 LTR ERVL 620 chrW 4704697 4704926 CR1-B2 631 - 4704697 4704926 0 3 13,15,104, 0,110,125, -,-,-, 744811 LINE CR1 77 chrW 4704957 4718673 GGERV28_LTR 856 - 4704957 4718673 0 4 477,6559,205,477, 0,477,13034,13239, -,-,-,-, 744813 LTR ERVK 620 chrW 4711979 4712150 GGLTR3F1 844 - 4711979 4712150 0 2 135,36, 0,135, -,-, 744814 LTR ERVL 620 chrW 4712150 4717959 GGLTR3F1 873 - 4712150 4717959 0 2 5311,496, 0,5313, -,-, 744815 LTR ERVL 621 chrW 4718853 4719967 Char12Mar1_GG 673 - 4718853 4719967 0 2 197,272, 0,842, -,-, 744816 DNA hAT-Charlie 621 chrW 4721209 4721902 GGLTR4B 605 + 4721209 4721902 0 2 595,98, 0,595, +,+, 744820 LTR ERVL 621 chrW 4722261 4723666 GGLTR3E3 676 + 4722261 4723666 0 2 538,866, 0,539, +,+, 744824 LTR ERVL 621 chrW 4723884 4731661 GGLTR7-int 530 + 4723884 4731661 0 8 630,196,185,250,1319,414,758,1319, 0,631,827,1288,2830,4409,5521,6458, +,+,+,+,+,+,+,+, 744826 LTR ERV1 621 chrW 4731661 4731785 GGLTR10C2 647 + 4731661 4731785 0 2 54,67, 0,57, +,+, 744828 LTR ERVK 621 chrW 4731785 4733136 GGLTR7-int 761 + 4731785 4733136 0 3 78,116,630, 0,605,721, +,+,+, 744829 LTR ERV1 621 chrW 4733148 4739363 GGLTR3A 681 - 4733148 4739363 0 4 333,3501,1819,562, 0,333,3834,5653, -,-,-,-, 744831 LTR ERVL 621 chrW 4739363 4743433 GGERVL-B-int 751 + 4739363 4743433 0 3 3490,402,178, 0,3490,3892, +,+,+, 744832 LTR ERVL 621 chrW 4749069 4751714 GGERVL18-int 528 + 4749069 4751714 0 2 1866,779, 0,1866, +,+, 744843 LTR ERVL 621 chrW 4753588 4756194 GGERVL-C-int 673 - 4753588 4756194 0 2 532,2074, 0,532, -,-, 744847 LTR ERVL 621 chrW 4758309 4761056 GGLTR5A 387 + 4758309 4761056 0 2 409,180, 0,2567, +,+, 744852 LTR ERVL 621 chrW 4762041 4765877 GGERVL-B-int 301 + 4762041 4765877 0 5 531,151,557,1346,441, 0,587,926,1483,3395, +,+,+,+,+, 744855 LTR ERVL 621 chrW 4766037 4774221 Mariner1b_GG 703 - 4766037 4774221 0 2 129,107, 0,8077, -,-, 744858 DNA TcMar-Mariner 621 chrW 4766166 4774114 GGERV30_LTR 811 + 4766166 4774114 0 2 175,158, 0,7790, +,+, 744859 LTR ERVL 621 chrW 4766341 4773956 GGLTR7A 819 - 4766341 4773956 0 3 630,6375,609, 0,631,7006, -,-,-, 744860 LTR ERV1 621 chrW 4775357 4795472 GGERVL18-int 480 - 4775357 4795472 0 7 155,177,144,1967,1053,948,197, 0,229,407,551,2523,18697,19918, -,-,-,-,-,-,-, 744863 LTR ERVL 621 chrW 4778934 4782686 GGERV10_LTR 604 - 4778934 4782686 0 4 148,62,2592,830, 0,268,330,2922, -,-,-,-, 744865 LTR ERVL 621 chrW 4782696 4785149 GGERVL-A-int 695 + 4782696 4785149 0 2 434,1996, 0,457, +,+, 744866 LTR ERVL 621 chrW 4786998 4792816 GGERV10_LTR 907 - 4786998 4792816 0 3 220,5376,221, 0,220,5597, -,-,-, 744870 LTR ERVL 621 chrW 4793306 4794052 GGERV10_LTR 327 - 4793306 4794052 0 2 416,327, 0,419, -,-, 744872 LTR ERVL 621 chrW 4796575 4802917 CR1-F2 439 + 4796575 4802917 0 3 372,498,406, 0,668,5936, +,+,+, 744874 LINE CR1 621 chrW 4797824 4802436 GGERVL18-int 735 - 4797824 4802436 0 4 216,920,2788,297, 0,216,1464,4315, -,-,-,-, 744876 LTR ERVL 621 chrW 4804548 4807759 GGERVL-B-int 769 - 4804548 4807759 0 4 555,1455,589,612, 0,555,2010,2599, -,-,-,-, 744881 LTR ERVL 621 chrW 4807979 4813913 GGERVL-A-int 751 - 4807979 4813913 0 4 1039,1583,1833,492, 0,1647,3609,5442, -,-,-,-, 744882 LTR ERVL 621 chrW 4827246 4827726 CR1-F2 618 - 4827246 4827726 0 2 136,95, 0,385, -,-, 744893 LINE CR1 621 chrW 4827776 4829110 CR1-F 455 - 4827776 4829110 0 2 264,1070, 0,264, -,-, 744896 LINE CR1 621 chrW 4829111 4831430 CR1-H 852 - 4829111 4831430 0 2 1709,610, 0,1709, -,-, 744897 LINE CR1 621 chrW 4845186 4846657 GGLTR3B1 722 + 4845186 4846657 0 2 490,981, 0,490, +,+, 744911 LTR ERVL 622 chrW 4863999 4866848 CR1-F 659 - 4863999 4866848 0 3 941,168,1384, 0,1295,1465, -,-,-, 744932 LINE CR1 622 chrW 4866887 4869075 GGERVL-B-int 792 - 4866887 4869075 0 5 208,630,450,275,89, 0,208,839,1289,2099, -,-,-,-,-, 744934 LTR ERVL 622 chrW 4869981 4871209 GGLTR4B 532 + 4869981 4871209 0 2 888,339, 0,889, +,+, 744938 LTR ERVL 622 chrW 4872299 4886851 CR1-C2 836 - 4872299 4886851 0 4 640,1912,229,1346, 0,1225,12977,13206, -,-,-,-, 744940 LINE CR1 622 chrW 4875437 4881373 GGERV10_LTR 862 - 4875437 4881373 0 4 158,62,5384,224, 0,265,327,5712, -,-,-,-, 744942 LTR ERVL 622 chrW 4885044 4885280 GGERV10_LTR 867 - 4885044 4885280 0 2 59,63, 0,173, -,-, 744945 LTR ERVL 622 chrW 4888393 4889717 CR1-C 698 - 4888393 4889717 0 2 351,386, 0,938, -,-, 744949 LINE CR1 622 chrW 4889709 4892838 GGERVL-A-int 411 + 4889709 4892838 0 4 119,324,468,1292, 0,119,782,1837, +,+,+,+, 744951 LTR ERVL 622 chrW 4892948 4893743 GGERVL-C-int 709 + 4892948 4893743 0 2 681,109, 0,686, +,+, 744954 LTR ERVL 622 chrW 4895997 4898657 GGERVL-B-int 651 + 4895997 4898657 0 4 422,376,243,304, 0,1402,1778,2356, +,+,+,+, 744959 LTR ERVL 622 chrW 4906649 4912911 CR1-Y3 788 - 4906649 4912911 0 2 421,176, 0,6086, -,-, 744967 LINE CR1 622 chrW 4907064 4912285 CR1-E 808 - 4907064 4912285 0 2 417,304, 0,4917, -,-, 744968 LINE CR1 622 chrW 4907480 4911980 GGLTR3B1 681 - 4907480 4911980 0 2 3999,501, 0,3999, -,-, 744969 LTR ERVL 622 chrW 4916021 4934000 GGERVL18-int 736 - 4916021 4934000 0 5 292,694,677,3220,641, 0,292,7047,13588,17338, -,-,-,-,-, 744972 LTR ERVL 622 chrW 4917007 4923068 GGLTR7A 871 - 4917007 4923068 0 4 609,3229,1607,609, 0,609,3845,5452, -,-,-,-, 744973 LTR ERV1 622 chrW 4923778 4929611 GGERV10_LTR 920 - 4923778 4929611 0 3 209,5399,224, 0,209,5609, -,-,-, 744974 LTR ERVL 622 chrW 4933999 4935446 GGERVL18-int 604 - 4933999 4935446 0 4 91,54,590,80, 0,383,437,1367, -,-,-,-, 744976 LTR ERVL 622 chrW 4938958 4943872 CR1-Y1_Aves 606 + 4938958 4943872 0 2 222,108, 0,4806, +,+, 744984 LINE CR1 622 chrW 4945069 4946489 CR1-E 480 - 4945069 4946489 0 2 262,666, 0,754, -,-, 744992 LINE CR1 622 chrW 4950440 4956992 GGERVL-A-int 745 + 4950440 4956992 0 6 487,1972,3397,45,508,98, 0,488,2460,5900,5945,6454, +,+,+,+,+,+, 744997 LTR ERVL 622 chrW 4960395 4968974 GGERVL-B-int 309 - 4960395 4968974 0 3 170,577,424, 0,7545,8155, -,-,-, 745001 LTR ERVL 622 chrW 4960772 4963108 CR1-D 744 - 4960772 4963108 0 2 1601,732, 0,1604, -,-, 745003 LINE CR1 622 chrW 4963108 4966408 GGERVL-C-int 662 - 4963108 4966408 0 4 532,137,727,1384, 0,532,1189,1916, -,-,-,-, 745004 LTR ERVL 622 chrW 4966866 4967200 GGERV10_LTR 609 - 4966866 4967200 0 2 160,83, 0,251, -,-, 745007 LTR ERVL 622 chrW 4974872 4979552 CR1-E 644 - 4974872 4979552 0 3 1118,1711,87, 0,2880,4593, -,-,-, 745014 LINE CR1 623 chrW 4990361 4992642 CR1-H 846 - 4990361 4992642 0 2 45,272, 0,2009, -,-, 745024 LINE CR1 623 chrW 4994315 4995271 CR1-B2 786 - 4994315 4995271 0 2 108,848, 0,108, -,-, 745028 LINE CR1 623 chrW 4994423 4996654 CR1-C2 549 - 4994423 4996654 0 2 57,1384, 0,847, -,-, 745029 LINE CR1 623 chrW 4997935 4998989 CR1-C4 354 - 4997935 4998989 0 2 204,850, 0,204, -,-, 745032 LINE CR1 623 chrW 5002681 5004425 CR1-Y1_Aves 454 + 5002681 5004425 0 3 367,405,191, 0,1148,1553, +,+,+, 745037 LINE CR1 623 chrW 5016939 5018756 GGERV20_I-int 218 + 5016939 5018756 0 2 901,130, 0,1687, +,+, 745043 LTR ERVL 623 chrW 5018801 5019779 GGERV10_LTR 406 + 5018801 5019779 0 3 20,130,574, 0,273,404, +,+,+, 745047 LTR ERVL 623 chrW 5020836 5020928 GGERV21_LTR 588 + 5020836 5020928 0 2 50,42, 0,50, +,+, 745050 LTR ERVL 623 chrW 5023017 5023795 GGLTR11-int 255 - 5023017 5023795 0 2 223,308, 0,470, -,-, 745052 LTR ERV1 623 chrW 5025948 5028369 GGERV30_LTR 736 - 5025948 5028369 0 2 292,2129, 0,292, -,-, 745056 LTR ERVL 623 chrW 5028369 5032271 GGERVL-B-int 856 - 5028369 5032271 0 3 524,880,2498, 0,524,1404, -,-,-, 745057 LTR ERVL 623 chrW 5034839 5036820 GGERVL-C-int 628 - 5034839 5036820 0 2 547,1434, 0,547, -,-, 745065 LTR ERVL 623 chrW 5036820 5039153 ENS1B-LTR 563 + 5036820 5039153 0 4 145,202,273,55, 0,1029,1363,2278, +,+,+,+, 745066 LTR ERVL 623 chrW 5039156 5044856 GGLTR7A 884 + 5039156 5044856 0 4 254,1611,3229,599, 0,254,1872,5101, +,+,+,+, 745069 LTR ERV1 623 chrW 5044856 5051469 CR1-G 590 - 5044856 5051469 0 2 77,494, 0,6119, -,-, 745070 LINE CR1 623 chrW 5044931 5050974 GGERV10_LTR 767 - 5044931 5050974 0 5 160,62,5381,159,62, 0,273,335,5717,5981, -,-,-,-,-, 745072 LTR ERVL 623 chrW 5051469 5057101 GGERVL18-int 625 - 5051469 5057101 0 2 349,5279, 0,353, -,-, 745074 LTR ERVL 623 chrW 5059757 5059914 A-rich 457 + 5059757 5059914 0 2 61,47, 0,110, +,+, 745076 Low_complexity Low_complexity 623 chrW 5076038 5077546 CR1-F2 668 - 5076038 5077546 0 2 784,724, 0,784, -,-, 745091 LINE CR1 623 chrW 5087523 5088076 CR1-D2 801 - 5087523 5088076 0 2 440,111, 0,442, -,-, 745098 LINE CR1 623 chrW 5097437 5097736 Charlie12_GG 439 - 5097437 5097736 0 2 154,62, 0,237, -,-, 745106 DNA hAT-Charlie 623 chrW 5103083 5108503 CR1-E 751 - 5103083 5108503 0 3 1205,121,855, 0,1205,4565, -,-,-, 745111 LINE CR1 623 chrW 5104432 5107652 CR1-G 850 + 5104432 5107652 0 2 1040,1653, 0,1567, +,+, 745112 LINE CR1 624 chrW 5114136 5114842 GGERVL18-int 536 - 5114136 5114842 0 3 228,94,376, 0,236,330, -,-,-, 745117 LTR ERVL 624 chrW 5114845 5116967 CR1-C4 684 + 5114845 5116967 0 2 1228,715, 0,1407, +,+, 745118 LINE CR1 624 chrW 5135707 5137864 CR1-C4 694 + 5135707 5137864 0 2 1234,744, 0,1413, +,+, 745134 LINE CR1 624 chrW 5138514 5141252 CR1-Y4 664 - 5138514 5141252 0 2 317,1153, 0,1585, -,-, 745138 LINE CR1 624 chrW 5141842 5146787 GGERVL-A-int 758 + 5141842 5146787 0 2 1488,3457, 0,1488, +,+, 745142 LTR ERVL 624 chrW 5158246 5160027 CR1-X 301 - 5158246 5160027 0 2 744,660, 0,1121, -,-, 745155 LINE CR1 585 chrW_NT_463468v1_random 27647 27726 (CGCGG)n 402 + 27647 27726 0 2 11,7, 0,72, +,+, 745187 Simple_repeat Simple_repeat 585 chrW_NT_463468v1_random 78209 78636 (CATCC)n 621 + 78209 78636 0 2 195,197, 0,230, +,+, 745219 Simple_repeat Simple_repeat 585 chrW_NT_463468v1_random 110431 111490 Char12Mar1_GG 585 - 110431 111490 0 2 425,485, 0,574, -,-, 745238 DNA hAT-Charlie 585 chrW_NT_463468v1_random 125340 126361 GGERVL-A-int 839 + 125340 126361 0 2 599,422, 0,599, +,+, 745250 LTR ERVL 586 chrW_NT_463468v1_random 131474 136570 GGLTR7-int 457 + 131474 136570 0 5 330,431,855,2736,245, 0,332,1206,2069,4851, +,+,+,+,+, 745254 LTR ERV1 585 chrW_NT_463469v1_random 5919 9578 GGERV28_I-int 76 + 5919 9578 0 2 1350,1994, 0,1665, +,+, 745287 LTR ERVK 585 chrW_NT_463469v1_random 9816 24850 GGLTR7-int 637 + 9816 24850 0 9 42,195,259,347,541,124,477,5567,584, 0,42,259,518,1872,2920,7967,8883,14450, +,+,+,+,+,+,+,+,+, 745288 LTR ERV1 585 chrW_NT_463469v1_random 14281 16089 EAVHP_I-int 688 + 14281 16089 0 3 1008,514,286, 0,1008,1522, +,+,+, 745290 LTR ERVK 585 chrW_NT_463469v1_random 16727 17489 GGLTR7B 325 - 16727 17489 0 2 321,268, 0,494, -,-, 745292 LTR ERV1 585 chrW_NT_463469v1_random 25752 26935 GGERVL-C-int 692 + 25752 26935 0 2 138,710, 0,473, +,+, 745296 LTR ERVL 585 chrW_NT_463469v1_random 28271 30844 GGERVL-C-int 729 + 28271 30844 0 2 1958,615, 0,1958, +,+, 745300 LTR ERVL 585 chrW_NT_463469v1_random 37499 37831 GGERV30_LTR 624 - 37499 37831 0 2 185,110, 0,222, -,-, 745307 LTR ERVL 585 chrW_NT_463469v1_random 38409 40742 CR1-D 645 + 38409 40742 0 2 159,1720, 0,613, +,+, 745310 LINE CR1 585 chrW_NT_463469v1_random 42573 45034 GGERVL-C-int 803 - 42573 45034 0 2 508,1953, 0,508, -,-, 745315 LTR ERVL 585 chrW_NT_463469v1_random 45562 49923 GGLTR3B1 775 - 45562 49923 0 2 3836,525, 0,3836, -,-, 745317 LTR ERVL 585 chrW_NT_463469v1_random 54602 57967 GGLTR7-int 519 - 54602 57967 0 4 343,816,339,309, 0,509,1614,3056, -,-,-,-, 745326 LTR ERV1 585 chrW_NT_463469v1_random 57963 58681 GGLTR7B 395 - 57963 58681 0 2 124,436, 0,282, -,-, 745328 LTR ERV1 585 chrW_NT_463469v1_random 59035 60184 GGLTR11-int 164 - 59035 60184 0 2 231,787, 0,362, -,-, 745329 LTR ERV1 585 chrW_NT_463469v1_random 60815 66071 CR1-E 617 + 60815 66071 0 3 694,82,856, 0,3759,4400, +,+,+, 745331 LINE CR1 585 chrW_NT_463469v1_random 67523 70544 GGLTR7-int 617 - 67523 70544 0 5 124,541,347,260,212, 0,631,2180,2527,2809, -,-,-,-,-, 745338 LTR ERV1 585 chrW_NT_463469v1_random 73610 76629 GGLTR7-int 659 - 73610 76629 0 2 971,1799, 0,1220, -,-, 745343 LTR ERV1 585 chrW_NT_463469v1_random 81726 82888 GGERV28_I-int 207 - 81726 82888 0 2 310,137, 0,1025, -,-, 745352 LTR ERVK 585 chrW_NT_463469v1_random 90721 91470 GGLTR5A 500 + 90721 91470 0 2 77,108, 0,641, +,+, 745363 LTR ERVL 585 chrW_NT_463469v1_random 96373 99172 CR1-C3 672 - 96373 99172 0 2 1009,682, 0,2117, -,-, 745370 LINE CR1 585 chrW_NT_463469v1_random 102020 106404 GGERVL18-int 648 - 102020 106404 0 2 619,3299, 0,1085, -,-, 745377 LTR ERVL 585 chrW_NT_463469v1_random 106404 110342 GGERVL-B-int 837 - 106404 110342 0 3 529,3123,282, 0,529,3656, -,-,-, 745379 LTR ERVL 585 chrW_NT_463469v1_random 111085 115704 GGERV10_LTR 962 - 111085 115704 0 2 220,4399, 0,220, -,-, 745381 LTR ERVL 585 chrW_NT_463472v1_random 193 1662 (CGGAG)n 343 + 193 1662 0 6 237,23,200,244,25,103, 0,433,469,715,1150,1366, +,+,+,+,+,+, 745393 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 1720 3148 GGLTR7A 869 + 1720 3148 0 2 609,818, 0,610, +,+, 745397 LTR ERV1 585 chrW_NT_463472v1_random 3339 4539 (CTCCG)n 313 + 3339 4539 0 3 508,88,425, 0,687,775, +,+,+, 745399 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 4538 5065 GGLTR3F1 885 - 4538 5065 0 2 491,36, 0,491, -,-, 745401 LTR ERVL 585 chrW_NT_463472v1_random 5065 10879 GGLTR3F1 863 - 5065 10879 0 2 5320,492, 0,5322, -,-, 745402 LTR ERVL 585 chrW_NT_463472v1_random 10968 11612 (CTCCG)n 353 + 10968 11612 0 3 194,188,20, 0,240,624, +,+,+, 745403 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 12429 13290 (CTCCG)n 310 + 12429 13290 0 2 145,702, 0,159, +,+, 745407 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 15200 16494 (CTCCG)n 338 + 15200 16494 0 4 420,64,286,314, 0,620,684,980, +,+,+,+, 745418 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 16553 18239 (CTCCG)n 297 + 16553 18239 0 4 266,575,68,364, 0,292,1059,1322, +,+,+,+, 745421 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 18348 19150 (CTCCG)n 311 + 18348 19150 0 2 436,320, 0,482, +,+, 745425 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 19256 20628 (CTCCG)n 308 + 19256 20628 0 4 194,489,225,368, 0,250,739,1004, +,+,+,+, 745427 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 20629 34273 GGERVL-A-int 692 - 20629 34273 0 5 479,2372,566,1827,588, 0,479,10663,11229,13056, -,-,-,-,-, 745428 LTR ERVL 585 chrW_NT_463472v1_random 23483 31292 GGLTR10C2 856 + 23483 31292 0 3 364,7080,364, 0,364,7445, +,+,+, 745429 LTR ERVK 585 chrW_NT_463472v1_random 37556 38758 (GAGTG)n 366 + 37556 38758 0 4 340,178,312,258, 0,392,582,944, +,+,+,+, 745439 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 39018 43784 GGERV28_I-int 849 + 39018 43784 0 3 476,40,4224, 0,502,542, +,+,+, 745442 LTR ERVK 585 chrW_NT_463472v1_random 50707 51132 (CACTC)n 396 + 50707 51132 0 2 190,185, 0,240, +,+, 745459 Simple_repeat Simple_repeat 585 chrW_NT_463472v1_random 52548 61137 GGERVL-C-int 684 + 52548 61137 0 4 568,1820,771,1911, 0,568,2388,6678, +,+,+,+, 745465 LTR ERVL 585 chrW_NT_463472v1_random 56735 59225 GGLTR7-int 805 + 56735 59225 0 3 215,1005,1270, 0,215,1220, +,+,+, 745468 LTR ERV1 585 chrW_NT_463472v1_random 66797 81437 GGLTR7-int 456 - 66797 81437 0 8 166,1000,227,150,471,788,488,281, 0,8175,9175,10563,12050,12521,13870,14359, -,-,-,-,-,-,-,-, 745479 LTR ERV1 585 chrW_NT_463472v1_random 66972 72752 GGERVL-B-int 759 + 66972 72752 0 2 502,5276, 0,504, +,+, 745480 LTR ERVL 585 chrW_NT_463472v1_random 73930 74852 RSV-int 300 - 73930 74852 0 2 210,101, 0,821, -,-, 745483 LTR ERVK 585 chrW_NT_463472v1_random 82965 84841 GGLTR7A 812 - 82965 84841 0 2 585,1290, 0,586, -,-, 745488 LTR ERV1 585 chrW_NT_463473v1_random 20193 22796 CR1-C 894 + 20193 22796 0 2 1007,1071, 0,1532, +,+, 745501 LINE CR1 585 chrW_NT_463473v1_random 33372 35990 CR1-F2 820 - 33372 35990 0 3 88,1862,118, 0,88,2500, -,-,-, 745507 LINE CR1 585 chrW_NT_463473v1_random 37036 37740 CR1-D2 688 + 37036 37740 0 2 72,128, 0,576, +,+, 745511 LINE CR1 585 chrW_NT_463473v1_random 40563 41905 CR1-F 768 + 40563 41905 0 2 136,1206, 0,136, +,+, 745516 LINE CR1 585 chrW_NT_463473v1_random 44126 48619 CR1-Y3 648 + 44126 48619 0 4 224,880,483,188, 0,817,3822,4305, +,+,+,+, 745521 LINE CR1 585 chrW_NT_463473v1_random 48616 49197 GGLTR11-int 539 + 48616 49197 0 2 124,193, 0,388, +,+, 745527 LTR ERV1 585 chrW_NT_463473v1_random 50483 51979 GGLTR7-int 567 + 50483 51979 0 3 106,818,572, 0,106,924, +,+,+, 745532 LTR ERV1 585 chrW_NT_463473v1_random 51977 53067 GGLTR7-int 556 + 51977 53067 0 3 180,271,338, 0,309,752, +,+,+, 745533 LTR ERV1 585 chrW_NT_463473v1_random 56582 57728 GGLTR3C2 688 + 56582 57728 0 3 275,244,304, 0,275,842, +,+,+, 745539 LTR ERVL 585 chrW_NT_463473v1_random 62062 63328 GGERVL18-int 479 + 62062 63328 0 2 873,68, 0,1198, +,+, 745548 LTR ERVL 585 chrW_NT_463473v1_random 62935 63260 GGERV10_LTR 492 - 62935 63260 0 2 158,70, 0,255, -,-, 745549 LTR ERVL 585 chrW_NT_463473v1_random 65495 66448 CR1-D 579 - 65495 66448 0 2 853,89, 0,864, -,-, 745556 LINE CR1 585 chrW_NT_463473v1_random 75218 76674 GGERVL-A-int 622 + 75218 76674 0 2 562,894, 0,562, +,+, 745564 LTR ERVL 585 chrW_NT_463473v1_random 76674 77392 GGLTR3D 799 - 76674 77392 0 2 584,61, 0,657, -,-, 745565 LTR ERVL 585 chrW_NT_463474v1_random 1308 3439 GGERVL-C-int 728 + 1308 3439 0 5 392,232,121,450,486, 0,823,1055,1195,1645, +,+,+,+,+, 745568 LTR ERVL 585 chrW_NT_463474v1_random 4329 6461 GGERV28_I-int 175 - 4329 6461 0 2 555,573, 0,1559, -,-, 745571 LTR ERVK 585 chrW_NT_463474v1_random 8797 9656 GGLTR7A 779 - 8797 9656 0 4 340,259,196,42, 0,340,621,817, -,-,-,-, 745573 LTR ERV1 585 chrW_NT_463474v1_random 15742 17470 GGERVL-B-int 691 - 15742 17470 0 3 272,824,579, 0,325,1149, -,-,-, 745577 LTR ERVL 585 chrW_NT_463474v1_random 19383 28405 GGERV28_I-int 246 + 19383 28405 0 3 376,150,1828, 0,689,7194, +,+,+, 745579 LTR ERVK 585 chrW_NT_463474v1_random 20241 26046 GGLTR3F1 897 + 20241 26046 0 2 491,5313, 0,492, +,+, 745580 LTR ERVL 585 chrW_NT_463474v1_random 26046 26573 GGLTR3F1 930 + 26046 26573 0 2 36,491, 0,36, +,+, 745581 LTR ERVL 585 chrW_NT_463474v1_random 28643 29503 GGLTR7A 780 + 28643 29503 0 4 42,196,260,340, 0,42,260,520, +,+,+,+, 745582 LTR ERV1 585 chrW_NT_463474v1_random 31839 41921 GGERV28_I-int 236 + 31839 41921 0 5 573,557,137,80,599, 0,1577,8369,8609,9483, +,+,+,+,+, 745584 LTR ERVK 585 chrW_NT_463474v1_random 34863 37240 GGERVL-C-int 787 - 34863 37240 0 4 486,796,235,397, 0,486,1282,1980, -,-,-,-, 745586 LTR ERVL 585 chrW_NT_463474v1_random 37240 38835 GGLTR7-int 614 + 37240 38835 0 6 601,173,50,134,54,289, 0,601,774,841,1000,1306, +,+,+,+,+,+, 745588 LTR ERV1 585 chrW_NT_463474v1_random 42447 47312 GGERVL-B-int 839 + 42447 47312 0 2 4282,583, 0,4282, +,+, 745590 LTR ERVL 585 chrW_NT_463474v1_random 50223 52005 GGLTR7-int 157 + 50223 52005 0 2 257,806, 0,976, +,+, 745592 LTR ERV1 585 chrW_NT_463474v1_random 52406 54234 GGERV28_I-int 922 + 52406 54234 0 2 489,961, 0,867, +,+, 745595 LTR ERVK 585 chrW_NT_463474v1_random 54738 58881 CR1-B2 910 + 54738 58881 0 2 458,286, 0,3857, +,+, 745597 LINE CR1 585 chrW_NT_463474v1_random 55211 58367 GGERV10_LTR 985 - 55211 58367 0 2 220,2936, 0,220, -,-, 745598 LTR ERVL 585 chrW_NT_463474v1_random 59863 60170 (AAATG)n 490 + 59863 60170 0 2 120,175, 0,132, +,+, 745604 Simple_repeat Simple_repeat 585 chrW_NT_463474v1_random 62467 68159 GGERVL-A-int 607 + 62467 68159 0 5 154,1339,2548,45,275, 0,507,2782,5372,5417, +,+,+,+,+, 745613 LTR ERVL 585 chrW_NT_463475v1_random 13064 15643 GGERVL-B-int 780 - 13064 15643 0 4 1328,172,446,75, 0,1884,2056,2504, -,-,-,-, 745633 LTR ERVL 585 chrW_NT_463475v1_random 15618 16273 GGERVL-C-int 749 + 15618 16273 0 2 580,75, 0,580, +,+, 745635 LTR ERVL 585 chrW_NT_463475v1_random 16303 20917 GGERVL-A-int 639 - 16303 20917 0 3 2231,1523,498, 0,2593,4116, -,-,-, 745637 LTR ERVL 585 chrW_NT_463475v1_random 26647 27307 GGERVL18-int 463 + 26647 27307 0 2 332,328, 0,332, +,+, 745642 LTR ERVL 585 chrW_NT_463475v1_random 28377 38050 GGERVL18-int 688 + 28377 38050 0 4 279,3535,617,482, 0,295,8095,9191, +,+,+,+, 745645 LTR ERVL 585 chrW_NT_463475v1_random 38048 41378 GGERV10_LTR 724 - 38048 41378 0 4 1323,1685,156,74, 0,1323,3011,3256, -,-,-,-, 745648 LTR ERVL 585 chrW_NT_463475v1_random 44323 45875 CR1-C4 608 + 44323 45875 0 2 233,1014, 0,538, +,+, 745650 LINE CR1 585 chrW_NT_463475v1_random 46535 47625 CR1-F2 875 - 46535 47625 0 2 74,1015, 0,75, -,-, 745652 LINE CR1 585 chrW_NT_463475v1_random 52054 53526 GGLTR3F1 911 - 52054 53526 0 2 491,980, 0,492, -,-, 745655 LTR ERVL 585 chrW_NT_463475v1_random 55874 57260 CR1-F2 600 + 55874 57260 0 2 1033,352, 0,1034, +,+, 745658 LINE CR1 585 chrW_NT_463475v1_random 58997 61748 GGLTR3A 872 - 58997 61748 0 2 528,2222, 0,529, -,-, 745662 LTR ERVL 585 chrW_NT_463476v1_random 15491 16801 GGERVL18-int 505 + 15491 16801 0 2 297,1000, 0,310, +,+, 745682 LTR ERVL 585 chrW_NT_463476v1_random 16801 19561 GGERVL-B-int 665 + 16801 19561 0 3 571,446,372, 0,571,2388, +,+,+, 745683 LTR ERVL 585 chrW_NT_463476v1_random 17818 19202 GGERVL-A-int 712 - 17818 19202 0 2 436,948, 0,436, -,-, 745684 LTR ERVL 585 chrW_NT_463476v1_random 19906 22259 GGERVL-C-int 760 + 19906 22259 0 3 897,308,510, 0,1535,1843, +,+,+, 745686 LTR ERVL 585 chrW_NT_463476v1_random 24478 30706 ENS3-int 337 + 24478 30706 0 5 752,97,620,93,308, 0,755,1351,5450,5920, +,+,+,+,+, 745689 LTR ERVL 585 chrW_NT_463476v1_random 26449 27855 GGLTR3D 720 - 26449 27855 0 3 266,72,153, 0,1181,1253, -,-,-, 745691 LTR ERVL 585 chrW_NT_463476v1_random 33352 36492 GGERV28_I-int 227 + 33352 36492 0 4 105,719,111,415, 0,834,2328,2725, +,+,+,+, 745693 LTR ERVK 585 chrW_NT_463476v1_random 37697 41769 GGLTR7-int 526 - 37697 41769 0 3 2003,479,326, 0,3265,3746, -,-,-, 745696 LTR ERV1 585 chrW_NT_463476v1_random 41941 45138 ENS1-int 495 + 41941 45138 0 3 801,633,646, 0,1918,2551, +,+,+, 745698 LTR ERVL 585 chrW_NT_463476v1_random 45373 49708 GGERVL18-int 468 + 45373 49708 0 2 654,3675, 0,660, +,+, 745700 LTR ERVL 585 chrW_NT_463476v1_random 51511 51788 GGERVL18-LTR 768 + 51511 51788 0 2 41,236, 0,41, +,+, 745704 LTR ERVL 585 chrW_NT_463477v1_random 3524 12317 GGERVL-A-int 673 - 3524 12317 0 3 1346,235,67, 0,8084,8726, -,-,-, 745707 LTR ERVL 585 chrW_NT_463477v1_random 4870 11608 GGLTR3A 843 + 4870 11608 0 3 528,5682,527, 0,529,6211, +,+,+, 745708 LTR ERVL 585 chrW_NT_463477v1_random 14900 16271 GGERVL-C-int 828 - 14900 16271 0 2 500,838, 0,533, -,-, 745714 LTR ERVL 585 chrW_NT_463477v1_random 16262 16468 GGERVL-A-int 804 - 16262 16468 0 2 146,60, 0,146, -,-, 745715 LTR ERVL 585 chrW_NT_463477v1_random 19047 21175 GGLTR3B4 614 + 19047 21175 0 2 534,1594, 0,534, +,+, 745717 LTR ERVL 585 chrW_NT_463477v1_random 22622 26793 GGLTR3F2 680 + 22622 26793 0 3 236,30,237, 0,3872,3934, +,+,+, 745719 LTR ERVL 585 chrW_NT_463477v1_random 22914 26498 GGERVL-B-int 739 + 22914 26498 0 2 210,3372, 0,212, +,+, 745721 LTR ERVL 585 chrW_NT_463477v1_random 33872 35742 GGLTR9 483 - 33872 35742 0 2 43,267, 0,1603, -,-, 745724 LTR ERVL 585 chrW_NT_463477v1_random 35972 38597 GGERVL18-int 681 - 35972 38597 0 2 153,2471, 0,154, -,-, 745726 LTR ERVL 585 chrW_NT_463477v1_random 38816 45011 GGERVL18-int 754 - 38816 45011 0 3 505,1861,317, 0,4017,5878, -,-,-, 745728 LTR ERVL 585 chrW_NT_463477v1_random 39276 41653 GGERVL-B-int 659 - 39276 41653 0 3 1734,82,76, 0,2217,2301, -,-,-, 745729 LTR ERVL 585 chrW_NT_463477v1_random 45931 50594 GGLTR7-int 277 - 45931 50594 0 7 103,278,813,524,367,256,137, 0,719,1299,2243,3285,3652,4526, -,-,-,-,-,-,-, 745732 LTR ERV1 585 chrW_NT_463478v1_random 302 6104 GGLTR3F1 855 - 302 6104 0 2 5308,492, 0,5310, -,-, 745735 LTR ERVL 585 chrW_NT_463478v1_random 6889 16465 CR1-F2 551 + 6889 16465 0 3 365,526,682, 0,825,8894, +,+,+, 745738 LINE CR1 585 chrW_NT_463478v1_random 8240 15764 GGLTR7A 773 - 8240 15764 0 3 583,6370,569, 0,584,6955, -,-,-, 745740 LTR ERV1 585 chrW_NT_463478v1_random 20054 22073 CR1-F 524 + 20054 22073 0 2 365,1205, 0,814, +,+, 745745 LINE CR1 585 chrW_NT_463478v1_random 25058 25132 (GCCC)n 404 + 25058 25132 0 2 6,41, 0,33, +,+, 745748 Simple_repeat Simple_repeat 585 chrW_NT_463478v1_random 25683 27703 CR1-F 524 + 25683 27703 0 2 365,1205, 0,815, +,+, 745752 LINE CR1 585 chrW_NT_463478v1_random 31299 33319 CR1-F 524 + 31299 33319 0 2 365,1205, 0,815, +,+, 745758 LINE CR1 585 chrW_NT_463478v1_random 36928 38948 CR1-F 524 + 36928 38948 0 2 365,1205, 0,815, +,+, 745764 LINE CR1 585 chrW_NT_463478v1_random 42544 44562 CR1-F 522 + 42544 44562 0 2 365,1204, 0,814, +,+, 745770 LINE CR1 585 chrW_NT_463479v1_random 2055 4818 GGERVL-A-int 670 - 2055 4818 0 3 137,617,2007, 0,139,756, -,-,-, 745779 LTR ERVL 585 chrW_NT_463479v1_random 5348 6173 GGERVL-C-int 567 - 5348 6173 0 2 212,395, 0,430, -,-, 745782 LTR ERVL 585 chrW_NT_463479v1_random 6298 10505 GGERVL18-int 730 - 6298 10505 0 5 524,344,378,63,2270, 0,524,1032,1418,1937, -,-,-,-,-, 745784 LTR ERVL 585 chrW_NT_463479v1_random 11532 12164 CR1-C4 640 + 11532 12164 0 2 80,552, 0,80, +,+, 745788 LINE CR1 585 chrW_NT_463479v1_random 16443 20530 GGERVK10-int 387 - 16443 20530 0 4 104,100,68,136, 0,967,1996,3951, -,-,-,-, 745792 LTR ERVK 585 chrW_NT_463479v1_random 19686 20075 CR1-C2 785 - 19686 20075 0 2 187,202, 0,187, -,-, 745794 LINE CR1 585 chrW_NT_463479v1_random 23562 29609 GGLTR3B3 614 - 23562 29609 0 5 93,492,394,4052,444, 0,665,1157,1551,5603, -,-,-,-,-, 745798 LTR ERVL 585 chrW_NT_463479v1_random 31390 32286 GGLTR5B 322 - 31390 32286 0 2 338,231, 0,665, -,-, 745804 LTR ERVL 585 chrW_NT_463479v1_random 42026 43025 Mariner1_GG 502 - 42026 43025 0 2 878,121, 0,878, -,-, 745816 DNA TcMar-Mariner 585 chrW_NT_463480v1_random 3814 4654 CR1-C3 541 - 3814 4654 0 2 56,402, 0,438, -,-, 745825 LINE CR1 585 chrW_NT_463480v1_random 7332 13876 GGLTR3A 863 - 7332 13876 0 4 514,47,5623,318, 0,514,603,6226, -,-,-,-, 745831 LTR ERVL 585 chrW_NT_463480v1_random 14514 19035 GGERVL-B-int 608 - 14514 19035 0 3 103,2700,583, 0,1238,3938, -,-,-, 745833 LTR ERVL 585 chrW_NT_463480v1_random 19169 20062 GGERVL-C-int 160 - 19169 20062 0 2 233,398, 0,495, -,-, 745836 LTR ERVL 585 chrW_NT_463480v1_random 22904 23941 GGERVL-A-int 530 - 22904 23941 0 3 434,51,551, 0,435,486, -,-,-, 745842 LTR ERVL 585 chrW_NT_463480v1_random 28786 29275 GGLTR3F2 782 - 28786 29275 0 2 227,232, 0,257, -,-, 745845 LTR ERVL 585 chrW_NT_463480v1_random 29275 35691 GGLTR3C2 602 - 29275 35691 0 4 3404,51,450,89, 0,3405,3456,6327, -,-,-,-, 745847 LTR ERVL 585 chrW_NT_463480v1_random 40916 42671 GGERVL-C-int 868 - 40916 42671 0 2 527,1228, 0,527, -,-, 745857 LTR ERVL 585 chrW_NT_463481v1_random 5873 6527 CR1-Y4 268 + 5873 6527 0 2 147,371, 0,283, +,+, 745862 LINE CR1 585 chrW_NT_463482v1_random 917 5583 GGLTR7-int 572 + 917 5583 0 9 137,184,35,134,54,228,1316,411,254, 0,138,322,374,533,895,2423,4001,4412, +,+,+,+,+,+,+,+,+, 745867 LTR ERV1 585 chrW_NT_463482v1_random 10453 13317 GGLTR12C 488 + 10453 13317 0 2 595,202, 0,2662, +,+, 745873 LTR ERVL 585 chrW_NT_463482v1_random 16331 16970 GGERVL-C-int 841 + 16331 16970 0 3 37,516,86, 0,37,553, +,+,+, 745883 LTR ERVL 585 chrW_NT_463482v1_random 19527 20029 CR1-C 429 + 19527 20029 0 3 171,113,153, 0,210,349, +,+,+, 745888 LINE CR1 585 chrW_NT_463482v1_random 20556 22447 GGERVL-B-int 245 - 20556 22447 0 3 670,454,210, 0,803,1681, -,-,-, 745891 LTR ERVL 585 chrW_NT_463482v1_random 22511 26387 CR1-C 807 + 22511 26387 0 2 1728,2148, 0,1728, +,+, 745892 LINE CR1 585 chrW_NT_463482v1_random 32164 34560 GGERVL-A-int 245 + 32164 34560 0 3 341,504,482, 0,1308,1914, +,+,+, 745901 LTR ERVL 585 chrW_NT_463482v1_random 34560 35515 GGERVL-C-int 578 + 34560 35515 0 2 262,162, 0,793, +,+, 745904 LTR ERVL 585 chrW_NT_463483v1_random 3471 9292 GGERV10_LTR 954 - 3471 9292 0 3 220,5381,219, 0,220,5602, -,-,-, 745913 LTR ERVL 585 chrW_NT_463483v1_random 9785 13345 GGERVL18-int 402 - 9785 13345 0 4 1735,228,1102,217, 0,1738,1966,3343, -,-,-,-, 745915 LTR ERVL 585 chrW_NT_463483v1_random 16492 28089 GGLTR7-int 277 - 16492 28089 0 8 341,2278,210,468,1290,285,276,304, 0,510,2991,3250,4086,6580,11015,11293, -,-,-,-,-,-,-,-, 745922 LTR ERV1 585 chrW_NT_463483v1_random 23837 27469 CR1-H 800 - 23837 27469 0 2 1756,1349, 0,2283, -,-, 745923 LINE CR1 585 chrW_NT_463483v1_random 28417 29966 CR1-H 763 - 28417 29966 0 3 42,137,1043, 0,42,506, -,-,-, 745926 LINE CR1 585 chrW_NT_463483v1_random 33702 34997 GGLTR11-int 475 - 33702 34997 0 2 151,293, 0,1002, -,-, 745929 LTR ERV1 585 chrW_NT_463484v1_random 1021 3948 GGLTR10C1 521 + 1021 3948 0 2 2611,316, 0,2611, +,+, 745934 LTR ERVK 585 chrW_NT_463484v1_random 20286 22475 CR1-Y4 547 + 20286 22475 0 2 728,1205, 0,984, +,+, 745945 LINE CR1 585 chrW_NT_463484v1_random 27180 29932 GGERVL-B-int 759 - 27180 29932 0 2 2250,500, 0,2252, -,-, 745953 LTR ERVL 585 chrW_NT_463484v1_random 31375 33499 GGLTR3B4 611 - 31375 33499 0 2 1594,530, 0,1594, -,-, 745955 LTR ERVL 585 chrW_NT_463485v1_random 478 4013 CR1-C 872 - 478 4013 0 2 1712,1823, 0,1712, -,-, 745957 LINE CR1 585 chrW_NT_463485v1_random 8492 9208 GGLTR11-int 613 - 8492 9208 0 2 224,116, 0,600, -,-, 745960 LTR ERV1 585 chrW_NT_463485v1_random 12773 20330 GGLTR7A 843 - 12773 20330 0 3 596,6363,585, 0,609,6972, -,-,-, 745962 LTR ERV1 585 chrW_NT_463485v1_random 20716 26485 GGERV10_LTR 712 - 20716 26485 0 3 206,5373,189, 0,206,5580, -,-,-, 745963 LTR ERVL 585 chrW_NT_463485v1_random 26588 28215 GGERVL-A-int 208 + 26588 28215 0 4 293,247,271,447, 0,548,909,1180, +,+,+,+, 745964 LTR ERVL 585 chrW_NT_463485v1_random 28212 31066 CR1-Y 569 + 28212 31066 0 4 267,38,457,729, 0,267,790,2125, +,+,+,+, 745965 LINE CR1 585 chrW_NT_463485v1_random 31788 33453 GGERVL-B-int 392 + 31788 33453 0 2 1120,112, 0,1553, +,+, 745973 LTR ERVL 585 chrW_NT_463487v1_random 7429 12166 GGLTR3F1 891 - 7429 12166 0 2 494,4243, 0,494, -,-, 745992 LTR ERVL 585 chrW_NT_463487v1_random 12826 18209 GGERVL-A-int 545 - 12826 18209 0 4 209,3061,434,534, 0,209,4415,4849, -,-,-,-, 745994 LTR ERVL 585 chrW_NT_463487v1_random 15632 17241 GGLTR3B1 664 - 15632 17241 0 2 1113,496, 0,1113, -,-, 745995 LTR ERVL 585 chrW_NT_463487v1_random 21139 21231 GGERV21_LTR 718 + 21139 21231 0 2 46,46, 0,46, +,+, 746000 LTR ERVL 585 chrW_NT_463487v1_random 21185 21460 GGERV10_LTR 409 + 21185 21460 0 2 18,147, 0,128, +,+, 746001 LTR ERVL 585 chrW_NT_463487v1_random 22179 28083 CR1-C4 445 - 22179 28083 0 3 477,380,730, 0,4422,5174, -,-,-, 746002 LINE CR1 585 chrW_NT_463487v1_random 22867 26274 GGERVL18-int 626 + 22867 26274 0 2 3068,339, 0,3068, +,+, 746004 LTR ERVL 585 chrW_NT_463488v1_random 516 1924 GGERVL-B-int 758 - 516 1924 0 3 299,568,541, 0,299,867, -,-,-, 746012 LTR ERVL 585 chrW_NT_463488v1_random 9117 12717 CR1-C2 684 - 9117 12717 0 3 900,1925,421, 0,900,3179, -,-,-, 746016 LINE CR1 585 chrW_NT_463488v1_random 16243 17908 GGLTR7-int 562 - 16243 17908 0 4 597,87,400,209, 0,600,687,1456, -,-,-,-, 746023 LTR ERV1 585 chrW_NT_463488v1_random 17907 24010 GGLTR7A 869 - 17907 24010 0 2 5494,609, 0,5494, -,-, 746025 LTR ERV1 585 chrW_NT_463489v1_random 1663 4448 GGERV20_I-int 651 - 1663 4448 0 5 83,127,323,1057,92, 0,445,812,1625,2693, -,-,-,-,-, 746030 LTR ERVL 585 chrW_NT_463489v1_random 4659 6113 GGLTR3D 617 + 4659 6113 0 2 631,823, 0,631, +,+, 746035 LTR ERVL 585 chrW_NT_463489v1_random 6113 14245 GGLTR7A 843 + 6113 14245 0 4 610,3084,3303,610, 0,611,4219,7522, +,+,+,+, 746036 LTR ERV1 585 chrW_NT_463489v1_random 14245 18522 GGERVL-C-int 716 + 14245 18522 0 2 2357,1389, 0,2888, +,+, 746038 LTR ERVL 585 chrW_NT_463489v1_random 18522 18848 GGERV10_LTR 677 - 18522 18848 0 2 160,62, 0,264, -,-, 746040 LTR ERVL 585 chrW_NT_463489v1_random 18844 20088 GGERVL-B-int 611 + 18844 20088 0 3 68,427,604, 0,213,640, +,+,+, 746041 LTR ERVL 585 chrW_NT_463489v1_random 20240 23696 GGLTR10C2 535 - 20240 23696 0 3 375,2703,377, 0,376,3079, -,-,-, 746045 LTR ERVK 585 chrW_NT_463489v1_random 24548 26173 GGERV28_LTR 844 - 24548 26173 0 3 152,331,294, 0,1000,1331, -,-,-, 746047 LTR ERVK 585 chrW_NT_463489v1_random 26904 27394 GGLTR3F1 896 + 26904 27394 0 2 231,206, 0,284, +,+, 746050 LTR ERVL 585 chrW_NT_463489v1_random 27845 28440 GGLTR3D 639 + 27845 28440 0 3 344,89,162, 0,344,433, +,+,+, 746054 LTR ERVL 585 chrW_NT_463490v1_random 8742 11212 CR1-D2 767 + 8742 11212 0 2 354,48, 0,2422, +,+, 746060 LINE CR1 585 chrW_NT_463490v1_random 16857 24383 GGLTR7-int 486 + 16857 24383 0 7 231,489,2356,958,152,210,585, 0,233,1229,4755,5713,6718,6941, +,+,+,+,+,+,+, 746068 LTR ERV1 585 chrW_NT_463491v1_random 2041 2855 GGLTR3B1 772 - 2041 2855 0 2 99,414, 0,400, -,-, 746073 LTR ERVL 585 chrW_NT_463491v1_random 2143 2441 GGLTR3E1 742 - 2143 2441 0 2 158,140, 0,158, -,-, 746074 LTR ERVL 585 chrW_NT_463491v1_random 4936 5890 ENS1-int 392 - 4936 5890 0 2 867,87, 0,867, -,-, 746077 LTR ERVL 585 chrW_NT_463491v1_random 6468 6914 (ACCCCATAGGG)n 385 + 6468 6914 0 2 224,149, 0,297, +,+, 746079 Satellite Satellite 585 chrW_NT_463492v1_random 2370 5736 GGLTR10D 964 - 2370 5736 0 3 347,2672,347, 0,347,3019, -,-,-, 746083 LTR ERVK 585 chrW_NT_463492v1_random 8724 10450 GGERV10_LTR 887 + 8724 10450 0 3 1402,62,159, 0,1402,1567, +,+,+, 746084 LTR ERVL 585 chrW_NT_463492v1_random 10450 23060 GGERVL18-int 729 + 10450 23060 0 3 1575,1096,1880, 0,8702,10730, +,+,+, 746085 LTR ERVL 585 chrW_NT_463492v1_random 12025 17556 GGERVL-A-int 738 + 12025 17556 0 4 491,2399,110,1159, 0,491,3789,4372, +,+,+,+, 746086 LTR ERVL 585 chrW_NT_463493v1_random 836 2863 CR1-F 530 - 836 2863 0 2 1205,361, 0,1666, -,-, 746094 LINE CR1 585 chrW_NT_463493v1_random 6423 8450 CR1-F 531 - 6423 8450 0 2 1205,361, 0,1666, -,-, 746099 LINE CR1 585 chrW_NT_463493v1_random 12010 14037 CR1-F 529 - 12010 14037 0 2 1205,361, 0,1666, -,-, 746104 LINE CR1 585 chrW_NT_463493v1_random 14585 14658 (GCGG)n 452 + 14585 14658 0 2 17,6, 0,67, +,+, 746108 Simple_repeat Simple_repeat 585 chrW_NT_463493v1_random 17599 19626 CR1-F 526 - 17599 19626 0 2 1205,361, 0,1666, -,-, 746111 LINE CR1 585 chrW_NT_463494v1_random 2640 15072 GGERVL-B-int 745 - 2640 15072 0 4 1710,255,1780,548, 0,2342,10104,11884, -,-,-,-, 746121 LTR ERVL 585 chrW_NT_463494v1_random 5237 12743 GGLTR7A 828 + 5237 12743 0 4 599,328,3826,597, 0,599,3082,6909, +,+,+,+, 746123 LTR ERV1 585 chrW_NT_463494v1_random 15117 15863 GGLTR7-int 419 + 15117 15863 0 2 413,271, 0,475, +,+, 746125 LTR ERV1 585 chrW_NT_463495v1_random 705 1240 GGLTR7B 670 + 705 1240 0 2 359,176, 0,359, +,+, 746131 LTR ERV1 585 chrW_NT_463495v1_random 1240 4621 GGERVK10-int 889 - 1240 4621 0 2 362,3019, 0,362, -,-, 746132 LTR ERVK 585 chrW_NT_463495v1_random 5115 9416 GGERV10_LTR 815 - 5115 9416 0 3 3976,159,80, 0,3977,4221, -,-,-, 746134 LTR ERVL 585 chrW_NT_463495v1_random 9415 10135 GGERVL18-LTR 540 - 9415 10135 0 2 301,346, 0,374, -,-, 746135 LTR ERVL 585 chrW_NT_463495v1_random 12306 13451 GGLTR3E1 863 - 12306 13451 0 2 326,264, 0,881, -,-, 746142 LTR ERVL 585 chrW_NT_463495v1_random 13827 17802 CR1-C3 656 + 13827 17802 0 2 344,192, 0,3783, +,+, 746145 LINE CR1 585 chrW_NT_463495v1_random 14171 17374 GGERVL-A-int 707 - 14171 17374 0 3 568,45,2548, 0,568,655, -,-,-, 746146 LTR ERVL 585 chrW_NT_463495v1_random 18311 20176 GGERVL18-int 429 - 18311 20176 0 2 1352,158, 0,1707, -,-, 746148 LTR ERVL 585 chrW_NT_463495v1_random 19665 20018 GGLTR12C 630 - 19665 20018 0 2 315,38, 0,315, -,-, 746149 LTR ERVL 585 chrW_NT_463496v1_random 484 5163 GGLTR7-int 652 + 484 5163 0 4 2400,1747,360,158, 0,2413,4161,4521, +,+,+,+, 746154 LTR ERV1 585 chrW_NT_463496v1_random 5165 14858 GGLTR7-int 743 - 5165 14858 0 3 101,550,2057, 0,7073,7636, -,-,-, 746155 LTR ERV1 585 chrW_NT_463496v1_random 5266 12209 GGERVK1-int 944 + 5266 12209 0 4 241,1898,4559,241, 0,241,2140,6702, +,+,+,+, 746156 LTR ERVK 585 chrW_NT_463496v1_random 14858 21042 GGERV10_LTR 846 - 14858 21042 0 4 216,38,5362,219, 0,216,602,5965, -,-,-,-, 746157 LTR ERVL 585 chrW_NT_463497v1_random 539 4715 CR1-F 577 - 539 4715 0 13 176,203,203,155,190,201,155,204,204,203,200,191,178, 0,218,463,956,1378,1613,2104,2525,2771,3017,3520,3762,3998, -,-,-,-,-,-,-,-,-,-,-,-,-, 746161 LINE CR1 585 chrW_NT_463497v1_random 4759 5675 CR1-F 556 - 4759 5675 0 4 181,204,202,203, 0,223,469,713, -,-,-,-, 746167 LINE CR1 585 chrW_NT_463497v1_random 5718 6396 CR1-F 628 - 5718 6396 0 3 208,204,182, 0,250,496, -,-,-, 746168 LINE CR1 585 chrW_NT_463497v1_random 6437 8374 CR1-F 651 - 6437 8374 0 4 204,183,206,113, 0,246,471,1824, -,-,-,-, 746169 LINE CR1 585 chrW_NT_463497v1_random 8448 11935 GGERVL-A-int 405 - 8448 11935 0 3 1393,1230,541, 0,1716,2946, -,-,-, 746171 LTR ERVL 585 chrW_NT_463497v1_random 14365 14445 (GCCC)n 376 + 14365 14445 0 2 6,41, 0,39, +,+, 746172 Simple_repeat Simple_repeat 585 chrW_NT_463497v1_random 15004 17026 CR1-F 516 + 15004 17026 0 2 361,1205, 0,817, +,+, 746176 LINE CR1 585 chrW_NT_463498v1_random 10425 12443 GGERV28_I-int 291 + 10425 12443 0 2 796,70, 0,1948, +,+, 746188 LTR ERVK 585 chrW_NT_463498v1_random 12709 13529 GGLTR7B 479 + 12709 13529 0 2 343,475, 0,345, +,+, 746189 LTR ERV1 585 chrW_NT_463498v1_random 15398 17798 GGERV28_I-int 139 - 15398 17798 0 2 697,540, 0,1860, -,-, 746192 LTR ERVK 585 chrW_NT_463498v1_random 17812 18665 GGLTR7-int 821 - 17812 18665 0 3 351,278,223, 0,352,630, -,-,-, 746194 LTR ERV1 585 chrW_NT_463499v1_random 3567 6556 GGERV28_I-int 193 + 3567 6556 0 3 784,286,86, 0,1971,2903, +,+,+, 746201 LTR ERVK 585 chrW_NT_463499v1_random 8136 9159 GGERVL-B-int 491 - 8136 9159 0 2 477,546, 0,477, -,-, 746203 LTR ERVL 585 chrW_NT_463499v1_random 12388 19688 GGLTR11 829 - 12388 19688 0 3 407,135,416, 0,6749,6884, -,-,-, 746206 LTR ERV1 585 chrW_NT_463499v1_random 12795 18611 GGLTR3F1 899 + 12795 18611 0 2 494,5321, 0,495, +,+, 746207 LTR ERVL 585 chrW_NT_463499v1_random 18611 19137 GGLTR3F1 881 + 18611 19137 0 2 37,489, 0,37, +,+, 746208 LTR ERVL 585 chrW_NT_463500v1_random 3365 5392 CR1-F 532 - 3365 5392 0 2 1204,361, 0,1666, -,-, 746213 LINE CR1 585 chrW_NT_463500v1_random 8914 10841 CR1-F 485 - 8914 10841 0 2 1162,338, 0,1589, -,-, 746218 LINE CR1 585 chrW_NT_463500v1_random 14302 16322 CR1-F 505 - 14302 16322 0 2 1197,362, 0,1658, -,-, 746222 LINE CR1 585 chrW_NT_463501v1_random 890 3646 GGERVL18-int 786 - 890 3646 0 2 2223,34, 0,2722, -,-, 746227 LTR ERVL 585 chrW_NT_463501v1_random 6365 6824 GGLTR7-int 801 - 6365 6824 0 3 111,269,66, 0,111,393, -,-,-, 746231 LTR ERV1 585 chrW_NT_463501v1_random 8089 9347 GGERVK10-int 477 - 8089 9347 0 2 288,970, 0,288, -,-, 746234 LTR ERVK 585 chrW_NT_463501v1_random 9715 10241 GGLTR3F1 930 - 9715 10241 0 2 490,36, 0,490, -,-, 746236 LTR ERVL 585 chrW_NT_463501v1_random 10241 16088 GGERVL-B-int 840 - 10241 16088 0 3 5307,488,51, 0,5308,5796, -,-,-, 746237 LTR ERVL 585 chrW_NT_463502v1_random 1883 2100 GGERVL18-LTR 716 - 1883 2100 0 2 30,187, 0,30, -,-, 746242 LTR ERVL 585 chrW_NT_463503v1_random 4912 4987 (GCCC)n 368 + 4912 4987 0 2 6,41, 0,34, +,+, 746249 Simple_repeat Simple_repeat 585 chrW_NT_463503v1_random 5526 7548 CR1-F 519 + 5526 7548 0 2 361,1205, 0,817, +,+, 746253 LINE CR1 585 chrW_NT_463503v1_random 10497 10572 (GCCC)n 368 + 10497 10572 0 2 6,41, 0,34, +,+, 746256 Simple_repeat Simple_repeat 585 chrW_NT_463503v1_random 11126 13152 CR1-F 517 + 11126 13152 0 2 362,1206, 0,820, +,+, 746260 LINE CR1 585 chrW_NT_463503v1_random 16085 16160 (GCCC)n 368 + 16085 16160 0 2 6,41, 0,34, +,+, 746263 Simple_repeat Simple_repeat 585 chrW_NT_463503v1_random 16712 18237 CR1-F 527 + 16712 18237 0 2 359,729, 0,796, +,+, 746267 LINE CR1 585 chrW_NT_463504v1_random 152 5946 GGLTR3F1 866 - 152 5946 0 2 5298,495, 0,5299, -,-, 746270 LTR ERVL 585 chrW_NT_463504v1_random 6005 10473 GGERV28_I-int 275 + 6005 10473 0 2 64,3940, 0,528, +,+, 746271 LTR ERVK 585 chrW_NT_463504v1_random 10711 18140 GGLTR7-int 628 + 10711 18140 0 10 214,260,350,539,33,1189,841,200,816,229, 0,236,496,2688,3704,3743,4937,5778,6201,7200, +,+,+,+,+,+,+,+,+,+, 746272 LTR ERV1 585 chrW_NT_463505v1_random 561 2330 CR1-C 843 - 561 2330 0 2 75,888, 0,881, -,-, 746277 LINE CR1 585 chrW_NT_463505v1_random 3308 5414 CR1-C 840 - 3308 5414 0 2 210,1373, 0,733, -,-, 746280 LINE CR1 585 chrW_NT_463505v1_random 5960 6900 GGLTR3E1 681 - 5960 6900 0 2 185,153, 0,787, -,-, 746284 LTR ERVL 585 chrW_NT_463505v1_random 7504 7836 GGLTR7B 446 + 7504 7836 0 2 104,226, 0,106, +,+, 746287 LTR ERV1 585 chrW_NT_463505v1_random 8070 15921 GGLTR7-int 692 - 8070 15921 0 10 274,133,286,68,121,541,343,259,195,42, 0,401,1295,1604,5058,5537,6990,7333,7614,7809, -,-,-,-,-,-,-,-,-,-, 746288 LTR ERV1 585 chrW_NT_463505v1_random 9759 13128 GGLTR10D 949 + 9759 13128 0 3 347,2675,347, 0,347,3022, +,+,+, 746290 LTR ERVK 585 chrW_NT_463506v1_random 468 950 GGERVL-B-int 717 - 468 950 0 2 88,394, 0,88, -,-, 746293 LTR ERVL 585 chrW_NT_463506v1_random 6592 8296 GGERVL-A-int 769 + 6592 8296 0 2 259,789, 0,915, +,+, 746302 LTR ERVL 585 chrW_NT_463506v1_random 6853 7507 GGLTR3F2 849 + 6853 7507 0 3 168,234,202, 0,168,452, +,+,+, 746303 LTR ERVL 585 chrW_NT_463506v1_random 8296 16054 GGLTR7-int 797 - 8296 16054 0 3 597,1907,304, 0,598,7454, -,-,-, 746305 LTR ERV1 585 chrW_NT_463506v1_random 10799 15750 CR1-B 825 - 10799 15750 0 3 3338,141,891, 0,3902,4060, -,-,-, 746306 LINE CR1 585 chrW_NT_463507v1_random 2561 2636 (GCGG)n 368 + 2561 2636 0 2 17,6, 0,69, +,+, 746313 Simple_repeat Simple_repeat 585 chrW_NT_463507v1_random 5582 7604 CR1-F 519 - 5582 7604 0 2 1205,361, 0,1661, -,-, 746316 LINE CR1 585 chrW_NT_463507v1_random 8143 8218 (GCGG)n 368 + 8143 8218 0 2 17,6, 0,69, +,+, 746320 Simple_repeat Simple_repeat 585 chrW_NT_463507v1_random 11056 12982 CR1-F 513 - 11056 12982 0 2 1112,359, 0,1567, -,-, 746323 LINE CR1 585 chrW_NT_463508v1_random 872 1462 GGLTR11 686 + 872 1462 0 2 62,490, 0,100, +,+, 746329 LTR ERV1 585 chrW_NT_463508v1_random 2723 3047 GGERV10_LTR 350 - 2723 3047 0 2 158,54, 0,270, -,-, 746333 LTR ERVL 585 chrW_NT_463508v1_random 3205 7748 GGLTR7-int 817 - 3205 7748 0 2 3814,567, 0,3976, -,-, 746335 LTR ERV1 585 chrW_NT_463508v1_random 7882 10654 GGERVL-A-int 585 + 7882 10654 0 2 501,2271, 0,501, +,+, 746337 LTR ERVL 585 chrW_NT_463508v1_random 10611 12108 GGERVL-A-int 300 - 10611 12108 0 4 143,216,240,79, 0,257,606,1418, -,-,-,-, 746338 LTR ERVL 585 chrW_NT_463508v1_random 15213 15607 GGLTR3B4 698 + 15213 15607 0 2 66,272, 0,122, +,+, 746344 LTR ERVL 585 chrW_NT_463509v1_random 8900 10615 GGLTR7A 889 - 8900 10615 0 3 1350,189,176, 0,1350,1539, -,-,-, 746348 LTR ERV1 585 chrW_NT_463509v1_random 10615 11963 GGLTR3B1 756 + 10615 11963 0 2 850,498, 0,850, +,+, 746349 LTR ERVL 585 chrW_NT_463510v1_random 582 6383 GGLTR3F1 897 - 582 6383 0 2 5306,494, 0,5307, -,-, 746353 LTR ERVL 585 chrW_NT_463511v1_random 1586 3617 CR1-F 435 - 1586 3617 0 2 1211,357, 0,1674, -,-, 746359 LINE CR1 585 chrW_NT_463511v1_random 7152 9161 CR1-F 534 - 7152 9161 0 2 1204,345, 0,1664, -,-, 746364 LINE CR1 585 chrW_NT_463511v1_random 12412 14284 CR1-F 535 - 12412 14284 0 2 1201,222, 0,1650, -,-, 746368 LINE CR1 585 chrW_NT_463512v1_random 9798 13280 GGERV28_I-int 55 + 9798 13280 0 2 1466,1701, 0,1781, +,+, 746373 LTR ERVK 585 chrW_NT_463513v1_random 603 6398 GGLTR3F1 873 - 603 6398 0 2 5299,495, 0,5300, -,-, 746375 LTR ERVL 585 chrW_NT_463513v1_random 6448 7169 GGLTR7-int 343 + 6448 7169 0 2 275,140, 0,581, +,+, 746376 LTR ERV1 585 chrW_NT_463513v1_random 7355 10543 GGLTR7-int 400 + 7355 10543 0 5 72,768,544,471,102, 0,576,1344,2520,3086, +,+,+,+,+, 746377 LTR ERV1 585 chrW_NT_463514v1_random 5419 5637 CR1-H2 610 + 5419 5637 0 2 62,65, 0,153, +,+, 746395 LINE CR1 585 chrW_NT_463514v1_random 5478 5584 CR1-C4 633 + 5478 5584 0 2 54,52, 0,54, +,+, 746396 LINE CR1 585 chrW_NT_463514v1_random 6080 6699 CR1-C4 660 + 6080 6699 0 11 47,44,44,44,44,44,44,55,88,44,44, 0,47,91,135,179,223,267,388,443,531,575, +,+,+,+,+,+,+,+,+,+,+, 746402 LINE CR1 585 chrW_NT_463514v1_random 6738 6879 CR1AVI 665 + 6738 6879 0 2 93,48, 0,93, +,+, 746406 LINE CR1 585 chrW_NT_463515v1_random 211 904 GGLTR11 427 - 211 904 0 2 281,412, 0,281, -,-, 746415 LTR ERV1 585 chrW_NT_463515v1_random 2435 5300 CR1-Y 816 - 2435 5300 0 3 280,1961,266, 0,638,2599, -,-,-, 746416 LINE CR1 585 chrW_NT_463515v1_random 10907 12062 GGLTR3G2 547 + 10907 12062 0 2 438,91, 0,1064, +,+, 746426 LTR ERVL 585 chrW_NT_463516v1_random 4450 6479 CR1-F 493 + 4450 6479 0 2 357,1205, 0,824, +,+, 746432 LINE CR1 585 chrW_NT_463516v1_random 9970 11926 CR1-F 505 + 9970 11926 0 2 360,1143, 0,813, +,+, 746438 LINE CR1 585 chrW_NT_463517v1_random 598 2617 GGLTR3F1 929 + 598 2617 0 2 1525,494, 0,1525, +,+, 746442 LTR ERVL 585 chrW_NT_463517v1_random 2617 3635 GGLTR7A 848 - 2617 3635 0 2 418,600, 0,418, -,-, 746443 LTR ERV1 585 chrW_NT_463517v1_random 3826 6231 GGERVL-A-int 367 - 3826 6231 0 3 260,334,242, 0,815,2163, -,-,-, 746445 LTR ERVL 585 chrW_NT_463517v1_random 6710 8331 CR1-F2 837 - 6710 8331 0 2 54,1074, 0,547, -,-, 746448 LINE CR1 585 chrW_NT_463518v1_random 331 3197 ENS1-LTR 921 - 331 3197 0 3 893,1914,59, 0,893,2807, -,-,-, 746455 LTR ERVL 585 chrW_NT_463518v1_random 7157 9423 GGERVL-B-int 769 - 7157 9423 0 2 353,1654, 0,612, -,-, 746458 LTR ERVL 585 chrW_NT_463518v1_random 10215 11590 GGLTR7-int 491 + 10215 11590 0 3 106,819,450, 0,106,925, +,+,+, 746463 LTR ERV1 585 chrW_NT_463519v1_random 9031 11272 CR1-C4 575 + 9031 11272 0 2 1169,358, 0,1883, +,+, 746470 LINE CR1 585 chrW_NT_463520v1_random 2534 4490 CR1-F 451 + 2534 4490 0 2 354,1177, 0,779, +,+, 746475 LINE CR1 585 chrW_NT_463520v1_random 8029 10045 CR1-F 493 + 8029 10045 0 2 359,1196, 0,820, +,+, 746481 LINE CR1 585 chrW_NT_463521v1_random 350 2494 GGERVL-B-int 774 + 350 2494 0 2 959,309, 0,1835, +,+, 746485 LTR ERVL 585 chrW_NT_463521v1_random 2492 7106 GGERVL18-int 619 + 2492 7106 0 3 1777,2193,315, 0,2102,4299, +,+,+, 746486 LTR ERVL 585 chrW_NT_463521v1_random 4268 4594 GGERV10_LTR 855 + 4268 4594 0 2 63,159, 0,167, +,+, 746487 LTR ERVL 585 chrW_NT_463521v1_random 7107 8718 GGERVL-C-int 624 + 7107 8718 0 2 1098,513, 0,1098, +,+, 746488 LTR ERVL 585 chrW_NT_463522v1_random 4404 5000 CR1-Y1_Aves 433 + 4404 5000 0 2 402,194, 0,402, +,+, 746496 LINE CR1 585 chrW_NT_463525v1_random 2346 5117 GGERVL18-int 771 + 2346 5117 0 2 34,2237, 0,534, +,+, 746520 LTR ERVL 585 chrW_NT_463525v1_random 5726 6749 ENS3-int 871 - 5726 6749 0 2 944,79, 0,944, -,-, 746523 LTR ERVL 585 chrW_NT_463526v1_random 6593 7139 CR1-X2 366 - 6593 7139 0 2 207,336, 0,210, -,-, 746542 LINE CR1 585 chrW_NT_463527v1_random 2223 2863 GGLTR11-int 572 + 2223 2863 0 2 129,226, 0,414, +,+, 746546 LTR ERV1 585 chrW_NT_463527v1_random 3920 4103 GGLTR3D 646 - 3920 4103 0 2 118,65, 0,118, -,-, 746549 LTR ERVL 585 chrW_NT_463527v1_random 4103 6985 GGLTR5A 423 - 4103 6985 0 2 223,254, 0,2628, -,-, 746550 LTR ERVL 585 chrW_NT_463527v1_random 5586 6688 CR1-D2 846 + 5586 6688 0 2 955,147, 0,955, +,+, 746553 LINE CR1 585 chrW_NT_463527v1_random 7630 8288 GGLTR8B 93 + 7630 8288 0 2 302,287, 0,371, +,+, 746554 LTR ERVL 585 chrW_NT_463527v1_random 8654 9477 GGLTR3D 692 + 8654 9477 0 2 67,756, 0,67, +,+, 746556 LTR ERVL 585 chrW_NT_463530v1_random 4996 7740 GGLTR3F1 778 + 4996 7740 0 2 472,2269, 0,475, +,+, 746573 LTR ERVL 585 chrW_NT_463532v1_random 3322 5971 GGERVL18-int 535 - 3322 5971 0 2 1435,696, 0,1953, -,-, 746581 LTR ERVL 585 chrW_NT_463532v1_random 4759 5274 GGLTR3F2 854 - 4759 5274 0 2 60,154, 0,361, -,-, 746582 LTR ERVL 585 chrW_NT_463532v1_random 7207 7499 GGLTR3F2 770 + 7207 7499 0 2 237,24, 0,268, +,+, 746585 LTR ERVL 585 chrW_NT_463533v1_random 531 1644 CR1-B2 656 + 531 1644 0 2 53,57, 0,1056, +,+, 746590 LINE CR1 585 chrW_NT_463533v1_random 703 801 CR1-E 641 + 703 801 0 2 53,45, 0,53, +,+, 746591 LINE CR1 585 chrW_NT_463533v1_random 982 1086 CR1-E 546 + 982 1086 0 2 53,51, 0,53, +,+, 746593 LINE CR1 585 chrW_NT_463533v1_random 1318 1422 CR1-E 622 + 1318 1422 0 2 53,51, 0,53, +,+, 746595 LINE CR1 585 chrW_NT_463537v1_random 1623 2564 GGERV28_I-int 705 + 1623 2564 0 3 477,37,425, 0,479,516, +,+,+, 746620 LTR ERVK 585 chrW_NT_463537v1_random 3495 6265 GGERV28_I-int 563 + 3495 6265 0 4 131,66,268,477, 0,287,2025,2293, +,+,+,+, 746622 LTR ERVK 585 chrW_NT_463537v1_random 4227 5062 GGLTR7-int 759 + 4227 5062 0 3 217,278,340, 0,217,495, +,+,+, 746623 LTR ERV1 585 chrW_NT_463538v1_random 1654 6174 GGLTR7-int 808 + 1654 6174 0 2 565,3795, 0,725, +,+, 746630 LTR ERV1 585 chrW_NT_463540v1_random 1874 6197 GGERV20_I-int 571 + 1874 6197 0 4 129,412,187,467, 0,176,589,3856, +,+,+,+, 746643 LTR ERVL 585 chrW_NT_463541v1_random 1971 2767 CR1-B2 576 + 1971 2767 0 2 62,48, 0,748, +,+, 746648 LINE CR1 585 chrW_NT_463541v1_random 2259 2470 CR1-C4 626 + 2259 2470 0 4 55,52,52,52, 0,55,107,159, +,+,+,+, 746652 LINE CR1 585 chrW_NT_463541v1_random 2809 3152 CR1-C4 634 + 2809 3152 0 5 47,44,43,44,59, 0,47,91,134,284, +,+,+,+,+, 746653 LINE CR1 585 chrW_NT_463541v1_random 3357 3542 CR1-C4 735 + 3357 3542 0 2 59,54, 0,131, +,+, 746657 LINE CR1 585 chrW_NT_463543v1_random 3489 5864 GGERVL-B-int 812 + 3489 5864 0 2 649,1726, 0,649, +,+, 746667 LTR ERVL 585 chrW_NT_463544v1_random 4804 5691 GGERVL-C-int 718 - 4804 5691 0 2 614,273, 0,614, -,-, 746674 LTR ERVL 585 chrW_NT_463545v1_random 5407 5520 CR1-C4 664 - 5407 5520 0 2 49,46, 0,67, -,-, 746684 LINE CR1 585 chrW_NT_463546v1_random 570 2006 GGLTR7-int 537 + 570 2006 0 3 201,383,699, 0,287,737, +,+,+, 746687 LTR ERV1 585 chrW_NT_463549v1_random 3821 4361 GGLTR3A 789 + 3821 4361 0 2 232,308, 0,232, +,+, 746700 LTR ERVL 585 chrW_NT_463550v1_random 1990 3827 CR1-C 783 + 1990 3827 0 2 1279,558, 0,1279, +,+, 746704 LINE CR1 585 chrW_NT_463550v1_random 3827 4172 GGLTR3F2 724 + 3827 4172 0 2 235,64, 0,281, +,+, 746705 LTR ERVL 585 chrW_NT_463558v1_random 1400 2543 GGLTR7A 841 - 1400 2543 0 3 84,950,109, 0,84,1034, -,-,-, 746728 LTR ERV1 585 chrW_NT_463561v1_random 665 1400 GGERVL-A-int 487 + 665 1400 0 2 550,185, 0,550, +,+, 746734 LTR ERVL 585 chrW_NT_463565v1_random 388 3205 GGERVL-A-int 391 - 388 3205 0 4 144,136,171,92, 0,1729,1900,2725, -,-,-,-, 746745 LTR ERVL 585 chrW_NT_463565v1_random 421 1438 GGLTR3B4 728 - 421 1438 0 2 773,244, 0,773, -,-, 746746 LTR ERVL 585 chrW_NT_463565v1_random 7059 9845 GGLTR3A 780 + 7059 9845 0 2 507,2278, 0,508, +,+, 746753 LTR ERVL 585 chrW_NT_463566v1_random 696 1713 GGLTR3B4 728 - 696 1713 0 2 773,244, 0,773, -,-, 746756 LTR ERVL 585 chrW_NT_463566v1_random 7334 10120 GGLTR3A 780 + 7334 10120 0 2 507,2278, 0,508, +,+, 746763 LTR ERVL 585 chrW_NT_463566v1_random 14280 16349 GGERVL-A-int 728 - 14280 16349 0 2 1988,71, 0,1998, -,-, 746766 LTR ERVL 585 chrW_NT_463566v1_random 16405 17001 GGLTR7A 915 - 16405 17001 0 2 374,222, 0,374, -,-, 746767 LTR ERV1 585 chrW_NT_463567v1_random 9639 10450 GGLTR3E2 686 + 9639 10450 0 2 523,288, 0,523, +,+, 746778 LTR ERVL 585 chrW_NT_463569v1_random 901 2090 GGLTR3B4 552 - 901 2090 0 3 390,388,116, 0,390,1073, -,-,-, 746781 LTR ERVL 585 chrW_NT_463570v1_random 1022 2287 GGERVL-A-int 690 - 1022 2287 0 2 541,724, 0,541, -,-, 746786 LTR ERVL 585 chrW_NT_463570v1_random 2756 3907 GGERV28_I-int 305 - 2756 3907 0 3 630,106,137, 0,817,1014, -,-,-, 746787 LTR ERVK 585 chrW_NT_463570v1_random 5021 5659 EAVHP_I-int 792 - 5021 5659 0 2 293,345, 0,293, -,-, 746789 LTR ERVK 585 chrW_NT_463571v1_random 1114 2379 GGERVL-A-int 690 - 1114 2379 0 2 541,724, 0,541, -,-, 746791 LTR ERVL 585 chrW_NT_463571v1_random 2848 3999 GGERV28_I-int 305 - 2848 3999 0 3 630,106,137, 0,817,1014, -,-,-, 746792 LTR ERVK 585 chrW_NT_463571v1_random 5113 8519 EAVHP_I-int 785 - 5113 8519 0 4 293,1095,1746,270, 0,293,1388,3136, -,-,-,-, 746794 LTR ERVK 585 chrW_NT_463571v1_random 9209 10398 GGLTR3B4 549 - 9209 10398 0 3 390,388,116, 0,390,1073, -,-,-, 746795 LTR ERVL 585 chrW_NT_463572v1_random 259 531 (CACTC)n 460 + 259 531 0 2 75,177, 0,95, +,+, 746800 Simple_repeat Simple_repeat 586 chrZ 137107 137216 A-rich 590 + 137107 137216 0 2 36,29, 0,80, +,+, 746918 Low_complexity Low_complexity 586 chrZ 191908 192007 CR1-C4 652 - 191908 192007 0 2 57,42, 0,57, -,-, 746972 LINE CR1 586 chrZ 243611 244131 CR1-F2 438 + 243611 244131 0 2 139,128, 0,392, +,+, 747027 LINE CR1 587 chrZ 316501 316896 (GCATG)n 424 + 316501 316896 0 2 155,60, 0,335, +,+, 747095 Simple_repeat Simple_repeat 587 chrZ 316862 317372 (CATAG)n 370 + 316862 317372 0 3 104,18,22, 0,290,488, +,+,+, 747097 Simple_repeat Simple_repeat 587 chrZ 338443 339068 CR1-Y2_Aves 258 + 338443 339068 0 2 143,305, 0,320, +,+, 747121 LINE CR1 588 chrZ 465275 465967 Charlie12_GG 545 - 465275 465967 0 2 197,120, 0,572, -,-, 747209 DNA hAT-Charlie 590 chrZ 747751 748209 CR1-C4 202 - 747751 748209 0 2 27,351, 0,107, -,-, 747327 LINE CR1 590 chrZ 766326 766685 CR1-Y4 627 + 766326 766685 0 2 282,66, 0,293, +,+, 747341 LINE CR1 590 chrZ 776791 777710 CR1-C4 604 + 776791 777710 0 2 365,553, 0,366, +,+, 747347 LINE CR1 591 chrZ 852784 852872 (CCCGCTCC)n 358 + 852784 852872 0 2 18,8, 0,80, +,+, 747387 Simple_repeat Simple_repeat 592 chrZ 932777 933016 CR1-D2 598 + 932777 933016 0 2 61,171, 0,68, +,+, 747444 LINE CR1 592 chrZ 952405 953887 CR1-Y2_Aves 173 - 952405 953887 0 2 641,302, 0,1180, -,-, 747459 LINE CR1 592 chrZ 1042852 1043272 CR1-Y3 600 - 1042852 1043272 0 2 235,178, 0,242, -,-, 747528 LINE CR1 593 chrZ 1051919 1055075 CR1-F2 413 - 1051919 1055075 0 2 206,223, 0,2933, -,-, 747535 LINE CR1 593 chrZ 1058679 1058780 CR1-H2 462 - 1058679 1058780 0 2 24,77, 0,24, -,-, 747545 LINE CR1 593 chrZ 1092821 1093290 CR1-Y4 568 - 1092821 1093290 0 2 230,211, 0,258, -,-, 747573 LINE CR1 593 chrZ 1123632 1124190 CR1-D2 567 - 1123632 1124190 0 2 158,400, 0,158, -,-, 747582 LINE CR1 593 chrZ 1130438 1131614 CR1-Y4 643 - 1130438 1131614 0 2 106,193, 0,983, -,-, 747588 LINE CR1 594 chrZ 1186571 1189455 CR1-C4 476 - 1186571 1189455 0 2 177,122, 0,2762, -,-, 747624 LINE CR1 594 chrZ 1208652 1209363 CR1-C4 524 + 1208652 1209363 0 2 447,264, 0,447, +,+, 747640 LINE CR1 594 chrZ 1214014 1214323 CR1-X1 375 - 1214014 1214323 0 2 147,105, 0,204, -,-, 747642 LINE CR1 594 chrZ 1215623 1216418 CR1-H2 593 - 1215623 1216418 0 2 70,80, 0,715, -,-, 747644 LINE CR1 594 chrZ 1227002 1228414 CR1-F2 473 - 1227002 1228414 0 2 139,336, 0,1076, -,-, 747653 LINE CR1 594 chrZ 1280093 1280184 CR1AVI 626 - 1280093 1280184 0 2 48,43, 0,48, -,-, 747741 LINE CR1 594 chrZ 1292656 1292806 CR1-E 712 - 1292656 1292806 0 3 48,51,51, 0,48,99, -,-,-, 747754 LINE CR1 595 chrZ 1322749 1323078 CR1-B2 595 + 1322749 1323078 0 5 71,59,49,51,53, 0,117,176,225,276, +,+,+,+,+, 747787 LINE CR1 595 chrZ 1325045 1325529 CR1-F2 408 + 1325045 1325529 0 2 198,174, 0,310, +,+, 747791 LINE CR1 595 chrZ 1334994 1335170 CR1-E 799 + 1334994 1335170 0 4 47,43,43,43, 0,47,90,133, +,+,+,+, 747801 LINE CR1 595 chrZ 1356354 1356487 CR1-E 774 + 1356354 1356487 0 3 47,43,43, 0,47,90, +,+,+, 747820 LINE CR1 595 chrZ 1356483 1356573 CR1-C4 703 + 1356483 1356573 0 2 47,43, 0,47, +,+, 747821 LINE CR1 595 chrZ 1356741 1356831 CR1-E 766 + 1356741 1356831 0 2 47,43, 0,47, +,+, 747826 LINE CR1 595 chrZ 1413321 1413462 CR1-E 680 - 1413321 1413462 0 3 46,48,47, 0,46,94, -,-,-, 747875 LINE CR1 595 chrZ 1413549 1413831 CR1-C4 504 - 1413549 1413831 0 2 43,199, 0,83, -,-, 747877 LINE CR1 595 chrZ 1420005 1420273 CR1-H2 493 - 1420005 1420273 0 3 101,68,90, 0,101,178, -,-,-, 747883 LINE CR1 596 chrZ 1446947 1447274 CR1-C4 522 + 1446947 1447274 0 2 193,52, 0,275, +,+, 747906 LINE CR1 596 chrZ 1455761 1456476 CR1-L3B_Croc 389 - 1455761 1456476 0 3 95,214,268, 0,140,447, -,-,-, 747919 LINE CR1 596 chrZ 1468235 1468327 CR1-C4 626 - 1468235 1468327 0 2 49,43, 0,49, -,-, 747933 LINE CR1 596 chrZ 1468323 1468447 CR1-H2 669 - 1468323 1468447 0 2 73,51, 0,73, -,-, 747934 LINE CR1 596 chrZ 1472795 1477190 CR1-F2 453 - 1472795 1477190 0 2 171,100, 0,4295, -,-, 747939 LINE CR1 596 chrZ 1476852 1476991 CR1-C3 717 + 1476852 1476991 0 3 47,43,49, 0,47,90, +,+,+, 747942 LINE CR1 596 chrZ 1503416 1503545 CR1-B2 470 + 1503416 1503545 0 2 81,48, 0,81, +,+, 747986 LINE CR1 596 chrZ 1503584 1506113 CR1-F2 851 + 1503584 1506113 0 2 332,937, 0,1592, +,+, 747988 LINE CR1 596 chrZ 1545686 1546767 CR1-C3 540 - 1545686 1546767 0 2 67,1014, 0,67, -,-, 748010 LINE CR1 596 chrZ 1561059 1561500 CR1-F 601 + 1561059 1561500 0 2 370,62, 0,379, +,+, 748022 LINE CR1 597 chrZ 1591880 1592081 CR1-F2 388 + 1591880 1592081 0 2 117,84, 0,117, +,+, 748046 LINE CR1 597 chrZ 1649580 1650115 CR1-C2 836 + 1649580 1650115 0 2 329,206, 0,329, +,+, 748110 LINE CR1 597 chrZ 1677109 1677881 CR1-F2 521 + 1677109 1677881 0 2 73,75, 0,697, +,+, 748151 LINE CR1 598 chrZ 1712313 1714460 CR1-F0 348 - 1712313 1714460 0 2 17,74, 0,2073, -,-, 748195 LINE CR1 598 chrZ 1748842 1749378 CR1-F2 523 - 1748842 1749378 0 2 174,87, 0,449, -,-, 748227 LINE CR1 598 chrZ 1771395 1772978 CR1-C4 579 - 1771395 1772978 0 2 1323,227, 0,1356, -,-, 748245 LINE CR1 598 chrZ 1811658 1812094 Char12Mar1_GG 599 - 1811658 1812094 0 2 186,250, 0,186, -,-, 748271 DNA hAT-Charlie 599 chrZ 1860056 1863509 CR1-F2 758 - 1860056 1863509 0 2 460,244, 0,3209, -,-, 748299 LINE CR1 599 chrZ 1894885 1895631 CR1-G 536 - 1894885 1895631 0 2 503,227, 0,519, -,-, 748328 LINE CR1 599 chrZ 1903754 1904044 GA-rich 416 + 1903754 1904044 0 2 98,147, 0,143, +,+, 748338 Low_complexity Low_complexity 599 chrZ 1913657 1913900 CR1-X1 422 - 1913657 1913900 0 2 60,183, 0,60, -,-, 748342 LINE CR1 599 chrZ 1914130 1915082 CR1-F2 548 - 1914130 1915082 0 2 472,465, 0,487, -,-, 748343 LINE CR1 599 chrZ 1917338 1917938 CR1-E 793 + 1917338 1917938 0 2 261,339, 0,261, +,+, 748348 LINE CR1 600 chrZ 2069732 2070237 CR1-C4 620 + 2069732 2070237 0 2 82,423, 0,82, +,+, 748447 LINE CR1 600 chrZ 2072983 2073900 CR1-D2 538 - 2072983 2073900 0 2 328,589, 0,328, -,-, 748450 LINE CR1 600 chrZ 2080006 2080108 A-rich 658 + 2080006 2080108 0 2 35,29, 0,73, +,+, 748454 Low_complexity Low_complexity 601 chrZ 2133063 2134536 CR1-C4 571 - 2133063 2134536 0 2 355,1106, 0,367, -,-, 748501 LINE CR1 601 chrZ 2150239 2150881 CR1-X2 470 - 2150239 2150881 0 2 273,190, 0,452, -,-, 748515 LINE CR1 602 chrZ 2234269 2234545 CR1-D 348 + 2234269 2234545 0 2 31,102, 0,174, +,+, 748563 LINE CR1 602 chrZ 2246992 2247542 CR1-C4 559 + 2246992 2247542 0 2 366,184, 0,366, +,+, 748574 LINE CR1 602 chrZ 2267941 2269223 CR1-Y2_Aves 463 - 2267941 2269223 0 2 141,176, 0,1106, -,-, 748589 LINE CR1 602 chrZ 2287343 2289093 CR1-F2 457 + 2287343 2289093 0 2 614,170, 0,1580, +,+, 748602 LINE CR1 602 chrZ 2316057 2317423 CR1-Y4 547 - 2316057 2317423 0 2 1029,44, 0,1322, -,-, 748621 LINE CR1 602 chrZ 2323108 2323465 CR1-F2 501 + 2323108 2323465 0 2 100,199, 0,158, +,+, 748624 LINE CR1 603 chrZ 2383507 2383751 CR1-Y3 510 + 2383507 2383751 0 2 160,84, 0,160, +,+, 748669 LINE CR1 603 chrZ 2388207 2388551 CR1-L3B_Croc 220 + 2388207 2388551 0 2 134,184, 0,160, +,+, 748674 LINE CR1 604 chrZ 2500227 2500300 (T)n 765 + 2500227 2500300 0 2 32,30, 0,43, +,+, 748764 Simple_repeat Simple_repeat 604 chrZ 2506897 2507427 CR1-H2 475 + 2506897 2507427 0 3 148,62,138, 0,202,392, +,+,+, 748769 LINE CR1 604 chrZ 2605129 2605509 (TTTCC)n 855 + 2605129 2605509 0 2 180,180, 0,200, +,+, 748859 Simple_repeat Simple_repeat 605 chrZ 2639205 2640232 CR1-Y2_Aves 281 - 2639205 2640232 0 3 596,181,199, 0,640,828, -,-,-, 748903 LINE CR1 606 chrZ 2758176 2758774 CR1-C3 494 + 2758176 2758774 0 2 527,71, 0,527, +,+, 749001 LINE CR1 607 chrZ 2894718 2894850 (T)n 848 + 2894718 2894850 0 2 25,45, 0,87, +,+, 749114 Simple_repeat Simple_repeat 607 chrZ 2901853 2902133 (TCTA)n 604 + 2901853 2902133 0 2 68,28, 0,252, +,+, 749144 Simple_repeat Simple_repeat 607 chrZ 2903658 2904267 CR1-L3B_Croc 152 + 2903658 2904267 0 2 278,277, 0,332, +,+, 749146 LINE CR1 607 chrZ 2916776 2917298 CR1-Y3 648 + 2916776 2917298 0 2 114,363, 0,159, +,+, 749167 LINE CR1 608 chrZ 3016196 3016311 (T)n 804 + 3016196 3016311 0 2 29,27, 0,88, +,+, 749268 Simple_repeat Simple_repeat 608 chrZ 3020552 3020637 (AACAA)n 318 + 3020552 3020637 0 2 8,35, 0,50, +,+, 749272 Simple_repeat Simple_repeat 608 chrZ 3024252 3024499 GGLTR3A 748 + 3024252 3024499 0 2 147,49, 0,198, +,+, 749278 LTR ERVL 608 chrZ 3045627 3047921 CR1-G 803 + 3045627 3047921 0 2 1692,119, 0,2175, +,+, 749309 LINE CR1 608 chrZ 3055486 3055814 CR1-C4 605 - 3055486 3055814 0 2 77,251, 0,77, -,-, 749318 LINE CR1 608 chrZ 3075541 3078621 CR1-Y4 429 - 3075541 3078621 0 3 463,293,803, 0,463,2277, -,-,-, 749336 LINE CR1 608 chrZ 3076002 3077815 CR1-Y1_Aves 397 - 3076002 3077815 0 2 416,125, 0,1688, -,-, 749337 LINE CR1 608 chrZ 3076395 3077692 CR1-C 812 - 3076395 3077692 0 2 782,515, 0,782, -,-, 749338 LINE CR1 608 chrZ 3096219 3100138 GGLTR3B2 534 + 3096219 3100138 0 2 392,155, 0,3764, +,+, 749353 LTR ERVL 608 chrZ 3096608 3099982 CR1-B 900 - 3096608 3099982 0 2 623,2485, 0,889, -,-, 749354 LINE CR1 608 chrZ 3101089 3101861 CR1-F2 784 + 3101089 3101861 0 2 399,373, 0,399, +,+, 749357 LINE CR1 608 chrZ 3106746 3107877 CR1-C3 613 - 3106746 3107877 0 2 669,441, 0,690, -,-, 749367 LINE CR1 608 chrZ 3111255 3111663 CR1-Y4 541 - 3111255 3111663 0 2 214,128, 0,280, -,-, 749376 LINE CR1 608 chrZ 3116897 3118456 CR1-C4 480 - 3116897 3118456 0 2 523,268, 0,1291, -,-, 749384 LINE CR1 608 chrZ 3117420 3118173 GGLTR12C 454 - 3117420 3118173 0 2 334,103, 0,650, -,-, 749385 LTR ERVL 608 chrZ 3120945 3121259 CR1-D2 354 - 3120945 3121259 0 2 170,114, 0,200, -,-, 749389 LINE CR1 609 chrZ 3151785 3152474 GGLTR12C 537 + 3151785 3152474 0 2 109,237, 0,452, +,+, 749427 LTR ERVL 609 chrZ 3209595 3210109 CR1-Y3 627 - 3209595 3210109 0 2 213,298, 0,216, -,-, 749503 LINE CR1 609 chrZ 3217945 3218379 CR1-F2 535 - 3217945 3218379 0 2 171,261, 0,173, -,-, 749512 LINE CR1 609 chrZ 3248018 3248090 A-rich 330 + 3248018 3248090 0 2 21,24, 0,48, +,+, 749541 Low_complexity Low_complexity 609 chrZ 3248235 3248751 CR1-F2 583 - 3248235 3248751 0 2 447,68, 0,448, -,-, 749544 LINE CR1 609 chrZ 3265954 3266419 CR1-C 809 + 3265954 3266419 0 3 134,225,105, 0,135,360, +,+,+, 749564 LINE CR1 609 chrZ 3271901 3273606 CR1-Y4 535 + 3271901 3273606 0 2 467,608, 0,1097, +,+, 749570 LINE CR1 609 chrZ 3272384 3272996 GGLTR5A 233 + 3272384 3272996 0 2 275,266, 0,346, +,+, 749571 LTR ERVL 610 chrZ 3280828 3281948 CR1-C4 232 - 3280828 3281948 0 2 433,557, 0,563, -,-, 749577 LINE CR1 610 chrZ 3300839 3304200 CR1-H 677 + 3300839 3304200 0 2 468,2893, 0,468, +,+, 749604 LINE CR1 610 chrZ 3317781 3319507 CR1-Y4 399 + 3317781 3319507 0 3 483,768,242, 0,533,1484, +,+,+, 749625 LINE CR1 610 chrZ 3324563 3324662 (A)n 1000 + 3324563 3324662 0 2 21,33, 0,66, +,+, 749630 Simple_repeat Simple_repeat 610 chrZ 3388610 3388684 (GAGGTG)n 406 + 3388610 3388684 0 2 9,48, 0,26, +,+, 749721 Simple_repeat Simple_repeat 611 chrZ 3410887 3410965 (TGTTCT)n 410 + 3410887 3410965 0 2 15,12, 0,66, +,+, 749749 Simple_repeat Simple_repeat 611 chrZ 3425365 3427335 GGERVL18-int 294 - 3425365 3427335 0 3 271,1163,213, 0,284,1757, -,-,-, 749759 LTR ERVL 611 chrZ 3432052 3433256 CR1-Y4 471 - 3432052 3433256 0 2 853,335, 0,869, -,-, 749766 LINE CR1 611 chrZ 3477814 3478599 CR1-Y4 487 + 3477814 3478599 0 2 136,649, 0,136, +,+, 749830 LINE CR1 611 chrZ 3483912 3485665 CR1-C4 495 + 3483912 3485665 0 2 421,667, 0,1086, +,+, 749837 LINE CR1 611 chrZ 3491274 3492838 CR1-C2 754 + 3491274 3492838 0 2 614,948, 0,616, +,+, 749848 LINE CR1 611 chrZ 3513775 3514237 GGLTR12C 491 - 3513775 3514237 0 2 366,59, 0,403, -,-, 749884 LTR ERVL 76 chrZ 3538050 3539276 CR1-D 644 - 3538050 3539276 0 2 499,509, 0,717, -,-, 749919 LINE CR1 612 chrZ 3565077 3565636 CR1-Y 283 - 3565077 3565636 0 2 303,256, 0,303, -,-, 749952 LINE CR1 612 chrZ 3595096 3596885 CR1-C2 610 - 3595096 3596885 0 2 39,1121, 0,668, -,-, 749996 LINE CR1 612 chrZ 3598906 3599028 A-rich 558 + 3598906 3599028 0 2 49,37, 0,85, +,+, 749999 Low_complexity Low_complexity 612 chrZ 3606322 3607121 CR1-D 272 + 3606322 3607121 0 2 358,416, 0,383, +,+, 750015 LINE CR1 612 chrZ 3628376 3630161 CR1-Y4 388 + 3628376 3630161 0 3 440,496,478, 0,587,1307, +,+,+, 750041 LINE CR1 612 chrZ 3630958 3631748 CR1-D 722 - 3630958 3631748 0 2 214,103, 0,687, -,-, 750044 LINE CR1 612 chrZ 3635680 3636134 CR1-L3B_Croc 311 + 3635680 3636134 0 2 87,112, 0,342, +,+, 750049 LINE CR1 612 chrZ 3644871 3646412 CR1-D2 525 + 3644871 3646412 0 2 657,861, 0,680, +,+, 750069 LINE CR1 613 chrZ 3683609 3686688 CR1-C4 433 + 3683609 3686688 0 3 765,1491,363, 0,771,2716, +,+,+, 750112 LINE CR1 613 chrZ 3691569 3692263 CR1-C3 555 + 3691569 3692263 0 2 154,538, 0,156, +,+, 750121 LINE CR1 613 chrZ 3704236 3706540 GGLTR10D 951 + 3704236 3706540 0 4 347,111,1760,86, 0,347,458,2218, +,+,+,+, 750138 LTR ERVK 613 chrZ 3722825 3723342 GGLTR5B 664 + 3722825 3723342 0 2 87,371, 0,146, +,+, 750161 LTR ERVL 613 chrZ 3722960 3723466 Z-REP 252 - 3722960 3723466 0 2 11,124, 0,382, -,-, 750163 Satellite macro 613 chrZ 3735449 3738577 CR1-X 415 + 3735449 3738577 0 2 892,1335, 0,1793, +,+, 750183 LINE CR1 613 chrZ 3743938 3744877 CR1-C 707 + 3743938 3744877 0 2 884,55, 0,884, +,+, 750190 LINE CR1 613 chrZ 3748284 3748328 (TTCTTT)n 366 + 3748284 3748328 0 2 13,10, 0,34, +,+, 750194 Simple_repeat Simple_repeat 613 chrZ 3756066 3756938 CR1-C4 484 + 3756066 3756938 0 2 344,528, 0,344, +,+, 750211 LINE CR1 613 chrZ 3765909 3767594 CR1-Y2_Aves 296 + 3765909 3767594 0 2 331,295, 0,1390, +,+, 750226 LINE CR1 613 chrZ 3769538 3770655 CR1-F2 583 + 3769538 3770655 0 3 46,394,262, 0,459,855, +,+,+, 750230 LINE CR1 613 chrZ 3769580 3769993 CR1-E 706 - 3769580 3769993 0 2 372,39, 0,374, -,-, 750231 LINE CR1 613 chrZ 3794363 3795973 CR1-Y4 593 + 3794363 3795973 0 2 225,336, 0,1274, +,+, 750271 LINE CR1 613 chrZ 3796111 3796416 CR1-F 532 + 3796111 3796416 0 2 70,235, 0,70, +,+, 750273 LINE CR1 613 chrZ 3797302 3797411 (TA)n 863 + 3797302 3797411 0 2 42,45, 0,64, +,+, 750276 Simple_repeat Simple_repeat 614 chrZ 3815319 3815797 GGLTR3F2 618 + 3815319 3815797 0 2 228,218, 0,260, +,+, 750303 LTR ERVL 614 chrZ 3877013 3877378 CR1-Y1_Aves 343 - 3877013 3877378 0 2 115,239, 0,126, -,-, 750365 LINE CR1 614 chrZ 3890927 3891229 CR1-3_Croc 246 + 3890927 3891229 0 2 29,154, 0,148, +,+, 750386 LINE CR1 615 chrZ 3958725 3959001 Mariner1_GG 676 - 3958725 3959001 0 2 124,128, 0,148, -,-, 750456 DNA TcMar-Mariner 615 chrZ 4007701 4008030 CR1-C4 488 + 4007701 4008030 0 2 156,173, 0,156, +,+, 750511 LINE CR1 615 chrZ 4011180 4011805 CR1-D 613 + 4011180 4011805 0 2 239,352, 0,273, +,+, 750519 LINE CR1 615 chrZ 4017906 4019313 CR1-F2 474 + 4017906 4019313 0 2 552,849, 0,558, +,+, 750526 LINE CR1 615 chrZ 4044403 4044535 (AT)n 388 + 4044403 4044535 0 2 49,55, 0,77, +,+, 750544 Simple_repeat Simple_repeat 615 chrZ 4053005 4053519 CR1-Y4 196 - 4053005 4053519 0 2 247,249, 0,265, -,-, 750554 LINE CR1 616 chrZ 4076506 4076916 (GAAA)n 909 + 4076506 4076916 0 2 218,180, 0,230, +,+, 750571 Simple_repeat Simple_repeat 617 chrZ 4204888 4206479 CR1-C4 518 - 4204888 4206479 0 2 97,1331, 0,260, -,-, 750718 LINE CR1 617 chrZ 4249479 4250033 ENS1B-LTR 381 + 4249479 4250033 0 2 163,387, 0,167, +,+, 750773 LTR ERVL 617 chrZ 4260300 4265418 Char12Mar1_GG 347 - 4260300 4265418 0 3 357,15,92, 0,4966,5026, -,-,-, 750788 DNA hAT-Charlie 617 chrZ 4260657 4265280 GGLTR3B1 727 + 4260657 4265280 0 2 496,4127, 0,496, +,+, 750789 LTR ERVL 617 chrZ 4282489 4283323 CR1-X 534 + 4282489 4283323 0 2 634,200, 0,634, +,+, 750816 LINE CR1 617 chrZ 4292295 4293520 Char12Mar1_GG 593 - 4292295 4293520 0 2 175,1050, 0,175, -,-, 750828 DNA hAT-Charlie 617 chrZ 4304782 4306448 CR1-F2 691 + 4304782 4306448 0 2 444,431, 0,1235, +,+, 750850 LINE CR1 617 chrZ 4313064 4314144 CR1-H 661 - 4313064 4314144 0 2 542,538, 0,542, -,-, 750863 LINE CR1 618 chrZ 4331331 4331442 (TATTT)n 236 + 4331331 4331442 0 2 46,8, 0,103, +,+, 750882 Simple_repeat Simple_repeat 618 chrZ 4386036 4388327 CR1-Y 741 - 4386036 4388327 0 2 1761,422, 0,1869, -,-, 750964 LINE CR1 618 chrZ 4393336 4393940 Char12Mar1_GG 380 + 4393336 4393940 0 3 394,43,112, 0,424,492, +,+,+, 750977 DNA hAT-Charlie 618 chrZ 4447097 4448478 CR1-C4 460 - 4447097 4448478 0 2 731,650, 0,731, -,-, 751049 LINE CR1 619 chrZ 4476519 4477048 GGLTR3F1 865 - 4476519 4477048 0 2 262,267, 0,262, -,-, 751082 LTR ERVL 619 chrZ 4493475 4495716 CR1-E 158 - 4493475 4495716 0 2 1753,456, 0,1785, -,-, 751104 LINE CR1 619 chrZ 4541206 4541299 A-rich 348 + 4541206 4541299 0 2 11,39, 0,54, +,+, 751159 Low_complexity Low_complexity 619 chrZ 4552138 4553543 CR1-C4 436 + 4552138 4553543 0 3 315,355,245, 0,315,1160, +,+,+, 751179 LINE CR1 619 chrZ 4572240 4576757 CR1-D 320 + 4572240 4576757 0 2 738,2618, 0,1899, +,+, 751208 LINE CR1 619 chrZ 4584677 4587135 CR1-F 672 - 4584677 4587135 0 2 1375,1077, 0,1381, -,-, 751223 LINE CR1 620 chrZ 4615098 4616936 CR1-C3 646 + 4615098 4616936 0 3 394,400,182, 0,1253,1656, +,+,+, 751264 LINE CR1 620 chrZ 4617902 4618556 GGLTR5B 112 + 4617902 4618556 0 2 291,288, 0,366, +,+, 751267 LTR ERVL 620 chrZ 4619327 4619848 GGERVL-B-int 386 + 4619327 4619848 0 2 414,94, 0,427, +,+, 751270 LTR ERVL 620 chrZ 4629430 4631665 CR1-G 744 + 4629430 4631665 0 2 1219,1012, 0,1223, +,+, 751286 LINE CR1 620 chrZ 4631949 4632899 CR1-E 262 - 4631949 4632899 0 2 199,704, 0,246, -,-, 751288 LINE CR1 620 chrZ 4643522 4644749 CR1-C4 425 + 4643522 4644749 0 2 479,748, 0,479, +,+, 751309 LINE CR1 620 chrZ 4655463 4657900 CR1-B2 732 + 4655463 4657900 0 2 1008,544, 0,1893, +,+, 751326 LINE CR1 620 chrZ 4660203 4662461 GGLTR10D-int 552 - 4660203 4662461 0 2 374,1881, 0,377, -,-, 751329 LTR ERVK 620 chrZ 4682376 4682789 CR1-L3A_Croc 227 + 4682376 4682789 0 2 223,162, 0,251, +,+, 751370 LINE CR1 620 chrZ 4691520 4694333 CR1-D2 402 + 4691520 4694333 0 2 150,302, 0,2511, +,+, 751393 LINE CR1 620 chrZ 4710415 4710470 (TTT)n 320 + 4710415 4710470 0 2 9,14, 0,41, +,+, 751418 Simple_repeat Simple_repeat 621 chrZ 4724850 4725189 CR1-F0 412 - 4724850 4725189 0 2 188,151, 0,188, -,-, 751437 LINE CR1 621 chrZ 4737785 4741567 CR1-F 124 - 4737785 4741567 0 3 31,2171,145, 0,75,3637, -,-,-, 751451 LINE CR1 621 chrZ 4760118 4760665 GGLTR5B 123 + 4760118 4760665 0 2 303,225, 0,322, +,+, 751483 LTR ERVL 621 chrZ 4845761 4846628 CR1-C4 495 - 4845761 4846628 0 2 705,135, 0,732, -,-, 751609 LINE CR1 622 chrZ 4858671 4859397 GGLTR8B 129 - 4858671 4859397 0 2 124,378, 0,348, -,-, 751622 LTR ERVL 622 chrZ 4865065 4865924 CR1-X 197 + 4865065 4865924 0 2 569,264, 0,595, +,+, 751633 LINE CR1 622 chrZ 4865939 4867323 CR1-C4 568 + 4865939 4867323 0 2 682,680, 0,704, +,+, 751635 LINE CR1 622 chrZ 4869760 4870739 CR1-Y2_Aves 200 - 4869760 4870739 0 2 270,199, 0,780, -,-, 751638 LINE CR1 622 chrZ 4893445 4893525 (TGTTTT)n 380 + 4893445 4893525 0 2 10,6, 0,74, +,+, 751674 Simple_repeat Simple_repeat 622 chrZ 4904267 4904912 CR1-D2 472 - 4904267 4904912 0 2 355,262, 0,383, -,-, 751686 LINE CR1 622 chrZ 4932976 4933544 GGLTR3F2 585 - 4932976 4933544 0 2 274,265, 0,303, -,-, 751729 LTR ERVL 622 chrZ 4942579 4943005 GGLTR5B 315 - 4942579 4943005 0 2 215,208, 0,218, -,-, 751748 LTR ERVL 622 chrZ 4947325 4948536 CR1-Y4 393 - 4947325 4948536 0 2 561,650, 0,561, -,-, 751755 LINE CR1 622 chrZ 4948534 4949570 CR1-Y2_Aves 285 - 4948534 4949570 0 2 746,87, 0,949, -,-, 751756 LINE CR1 622 chrZ 4965211 4965865 CR1-Y4 546 + 4965211 4965865 0 2 513,104, 0,550, +,+, 751779 LINE CR1 622 chrZ 4973280 4973374 (T)n 820 + 4973280 4973374 0 2 25,22, 0,72, +,+, 751794 Simple_repeat Simple_repeat 622 chrZ 4976969 4977741 Mariner1_GG 472 - 4976969 4977741 0 2 655,105, 0,667, -,-, 751798 DNA TcMar-Mariner 623 chrZ 4986749 4988697 CR1-C4 396 + 4986749 4988697 0 2 696,591, 0,1357, +,+, 751813 LINE CR1 623 chrZ 4988703 4992982 CR1-F2 454 + 4988703 4992982 0 2 1547,914, 0,3365, +,+, 751817 LINE CR1 623 chrZ 5002440 5004165 Mariner1_GG 384 - 5002440 5004165 0 2 321,846, 0,879, -,-, 751836 DNA TcMar-Mariner 623 chrZ 5006429 5007376 ENS1B-LTR 489 - 5006429 5007376 0 2 452,325, 0,622, -,-, 751840 LTR ERVL 623 chrZ 5025863 5029566 CR1-C3 570 + 5025863 5029566 0 4 78,757,777,438, 0,639,2477,3265, +,+,+,+, 751873 LINE CR1 623 chrZ 5040419 5050215 CR1-Y 467 - 5040419 5050215 0 3 1159,157,200, 0,1247,9596, -,-,-, 751899 LINE CR1 623 chrZ 5041867 5042896 CR1-Y 425 - 5041867 5042896 0 2 338,583, 0,446, -,-, 751901 LINE CR1 623 chrZ 5042893 5048442 GGLTR3A 787 + 5042893 5048442 0 2 279,5270, 0,279, +,+, 751903 LTR ERVL 623 chrZ 5048926 5049972 GGLTR3A 810 + 5048926 5049972 0 2 526,520, 0,526, +,+, 751905 LTR ERVL 623 chrZ 5050220 5052505 CR1-C4 483 + 5050220 5052505 0 3 233,404,809, 0,1072,1476, +,+,+, 751906 LINE CR1 623 chrZ 5068794 5072172 CR1-Y 320 - 5068794 5072172 0 2 1620,1714, 0,1664, -,-, 751937 LINE CR1 623 chrZ 5098156 5101699 CR1-F2 485 - 5098156 5101699 0 7 200,74,343,274,879,359,416, 0,200,751,1094,1877,2762,3127, -,-,-,-,-,-,-, 751987 LINE CR1 623 chrZ 5098432 5098908 CR1-B2 785 + 5098432 5098908 0 2 301,175, 0,301, +,+, 751988 LINE CR1 624 chrZ 5126750 5126796 (TTTATA)n 524 + 5126750 5126796 0 2 9,15, 0,31, +,+, 752023 Simple_repeat Simple_repeat 624 chrZ 5130042 5130879 CR1-D2 651 + 5130042 5130879 0 2 30,797, 0,40, +,+, 752033 LINE CR1 624 chrZ 5131677 5132297 Char12Mar1_GG 481 - 5131677 5132297 0 2 257,332, 0,288, -,-, 752034 DNA hAT-Charlie 624 chrZ 5150785 5152083 CR1-X2 415 - 5150785 5152083 0 2 58,427, 0,871, -,-, 752062 LINE CR1 624 chrZ 5154595 5155994 CR1-D 499 - 5154595 5155994 0 2 296,1103, 0,296, -,-, 752067 LINE CR1 624 chrZ 5157499 5159439 CR1-Y4 503 - 5157499 5159439 0 3 181,301,221, 0,834,1719, -,-,-, 752070 LINE CR1 624 chrZ 5157671 5158336 CR1-D 667 - 5157671 5158336 0 2 564,101, 0,564, -,-, 752071 LINE CR1 624 chrZ 5158984 5159217 GGLTR3D 502 + 5158984 5159217 0 2 167,55, 0,178, +,+, 752073 LTR ERVL 624 chrZ 5159599 5160288 CR1-E 700 + 5159599 5160288 0 2 43,161, 0,528, +,+, 752075 LINE CR1 624 chrZ 5166061 5168868 GGLTR3A 793 - 5166061 5168868 0 3 132,206,2469, 0,132,338, -,-,-, 752087 LTR ERVL 624 chrZ 5191599 5194001 CR1-F2 401 - 5191599 5194001 0 3 1149,93,1132, 0,1149,1270, -,-,-, 752122 LINE CR1 624 chrZ 5194017 5194709 CR1-Y3 340 + 5194017 5194709 0 2 112,371, 0,321, +,+, 752124 LINE CR1 624 chrZ 5220784 5221475 CR1-C4 505 + 5220784 5221475 0 3 211,412,64, 0,211,627, +,+,+, 752168 LINE CR1 625 chrZ 5257102 5257959 CR1-F2 370 - 5257102 5257959 0 2 91,453, 0,404, -,-, 752230 LINE CR1 625 chrZ 5259386 5260699 CR1-C4 436 - 5259386 5260699 0 2 445,845, 0,468, -,-, 752233 LINE CR1 625 chrZ 5268863 5271033 CR1-C3 508 + 5268863 5271033 0 2 1698,472, 0,1698, +,+, 752244 LINE CR1 625 chrZ 5289797 5291299 CR1-Y4 462 - 5289797 5291299 0 2 159,363, 0,1139, -,-, 752275 LINE CR1 625 chrZ 5289957 5290884 CR1-C 790 + 5289957 5290884 0 2 146,781, 0,146, +,+, 752276 LINE CR1 625 chrZ 5291340 5292993 CR1-Y4 505 + 5291340 5292993 0 2 96,249, 0,1404, +,+, 752278 LINE CR1 625 chrZ 5291436 5292743 ENS3-int 459 - 5291436 5292743 0 2 897,410, 0,897, -,-, 752279 LTR ERVL 625 chrZ 5299936 5301625 CR1-D 403 + 5299936 5301625 0 2 145,1530, 0,159, +,+, 752290 LINE CR1 625 chrZ 5306632 5307313 CR1-F2 763 - 5306632 5307313 0 3 69,95,505, 0,76,176, -,-,-, 752306 LINE CR1 625 chrZ 5308620 5308664 (TTTTAT)n 576 + 5308620 5308664 0 2 14,6, 0,38, +,+, 752308 Simple_repeat Simple_repeat 625 chrZ 5324577 5325110 CR1-G 270 - 5324577 5325110 0 2 177,326, 0,207, -,-, 752333 LINE CR1 625 chrZ 5335176 5347900 Char12Mar1_GG 557 - 5335176 5347900 0 2 587,54, 0,12670, -,-, 752344 DNA hAT-Charlie 625 chrZ 5342156 5343787 GGERVL-C-int 312 + 5342156 5343787 0 2 224,943, 0,688, +,+, 752351 LTR ERVL 625 chrZ 5344661 5345191 CR1-C4 481 - 5344661 5345191 0 2 301,229, 0,301, -,-, 752355 LINE CR1 625 chrZ 5371107 5371187 (ATAACA)n 374 + 5371107 5371187 0 2 17,23, 0,57, +,+, 752395 Simple_repeat Simple_repeat 626 chrZ 5383032 5386050 CR1-E 633 + 5383032 5386050 0 3 603,1187,506, 0,1325,2512, +,+,+, 752416 LINE CR1 626 chrZ 5406595 5410561 CR1-C3 680 + 5406595 5410561 0 2 2330,147, 0,3819, +,+, 752446 LINE CR1 626 chrZ 5414986 5418395 CR1-H 782 - 5414986 5418395 0 3 235,819,1736, 0,235,1673, -,-,-, 752453 LINE CR1 626 chrZ 5423902 5425659 CR1-D2 454 - 5423902 5425659 0 3 252,595,583, 0,571,1174, -,-,-, 752465 LINE CR1 626 chrZ 5426869 5433051 GGERVK1-int 977 - 5426869 5433051 0 4 241,447,5253,241, 0,241,688,5941, -,-,-,-, 752469 LTR ERVK 626 chrZ 5433784 5434994 CR1-C4 433 + 5433784 5434994 0 2 606,604, 0,606, +,+, 752471 LINE CR1 626 chrZ 5469140 5469840 ENS1-LTR 190 - 5469140 5469840 0 3 359,120,214, 0,366,486, -,-,-, 752523 LTR ERVL 626 chrZ 5470363 5473007 CR1-F2 642 - 5470363 5473007 0 2 667,104, 0,2540, -,-, 752524 LINE CR1 626 chrZ 5471032 5472908 CR1-C2 830 - 5471032 5472908 0 2 799,150, 0,1726, -,-, 752525 LINE CR1 626 chrZ 5474762 5477442 CR1-H 673 - 5474762 5477442 0 2 1230,451, 0,2229, -,-, 752529 LINE CR1 626 chrZ 5482990 5483900 CR1-Y2 505 - 5482990 5483900 0 3 333,196,360, 0,354,550, -,-,-, 752539 LINE CR1 78 chrZ 5505007 5505629 GGLTR8B 404 + 5505007 5505629 0 2 553,69, 0,553, +,+, 752573 LTR ERVL 627 chrZ 5507979 5512815 CR1-F2 461 - 5507979 5512815 0 2 929,95, 0,4741, -,-, 752578 LINE CR1 627 chrZ 5579343 5579852 CR1-C3 520 - 5579343 5579852 0 2 190,262, 0,247, -,-, 752685 LINE CR1 627 chrZ 5585097 5585679 Mariner1b_GG 512 + 5585097 5585679 0 2 220,335, 0,247, +,+, 752692 DNA TcMar-Mariner 627 chrZ 5595848 5597239 CR1-C4 611 + 5595848 5597239 0 2 392,68, 0,1323, +,+, 752707 LINE CR1 627 chrZ 5600165 5600756 CR1-F2 622 + 5600165 5600756 0 2 519,72, 0,519, +,+, 752714 LINE CR1 627 chrZ 5605259 5607348 CR1-D2 647 + 5605259 5607348 0 4 236,120,149,150, 0,621,1302,1939, +,+,+,+, 752719 LINE CR1 627 chrZ 5605514 5605865 CR1-C4 557 - 5605514 5605865 0 2 158,178, 0,173, -,-, 752720 LINE CR1 627 chrZ 5611142 5611768 CR1-Y3 564 - 5611142 5611768 0 2 356,234, 0,392, -,-, 752731 LINE CR1 627 chrZ 5611793 5613843 CR1-C4 418 - 5611793 5613843 0 2 385,664, 0,1386, -,-, 752733 LINE CR1 628 chrZ 5638507 5641411 CR1-B2 660 - 5638507 5641411 0 2 1467,1437, 0,1467, -,-, 752764 LINE CR1 628 chrZ 5652351 5652448 (T)n 869 + 5652351 5652448 0 2 25,23, 0,74, +,+, 752785 Simple_repeat Simple_repeat 628 chrZ 5655093 5659055 CR1-G 811 + 5655093 5659055 0 3 1468,501,1588, 0,1468,2374, +,+,+, 752792 LINE CR1 628 chrZ 5657062 5657467 GGLTR3G1 603 + 5657062 5657467 0 2 262,143, 0,262, +,+, 752793 LTR ERVL 628 chrZ 5672611 5672683 (TGTTTT)n 520 + 5672611 5672683 0 2 9,23, 0,49, +,+, 752813 Simple_repeat Simple_repeat 628 chrZ 5678819 5679391 GGLTR5B 520 - 5678819 5679391 0 2 102,445, 0,127, -,-, 752826 LTR ERVL 628 chrZ 5683135 5685816 CR1-C4 527 - 5683135 5685816 0 2 799,950, 0,1731, -,-, 752832 LINE CR1 628 chrZ 5724007 5726003 CR1-E 416 + 5724007 5726003 0 2 1127,151, 0,1845, +,+, 752890 LINE CR1 628 chrZ 5725130 5725844 CR1-H 716 - 5725130 5725844 0 2 672,42, 0,672, -,-, 752891 LINE CR1 628 chrZ 5728821 5734066 CR1-H 674 - 5728821 5734066 0 2 3782,904, 0,4341, -,-, 752895 LINE CR1 628 chrZ 5737677 5738230 CR1-C4 494 - 5737677 5738230 0 2 242,311, 0,242, -,-, 752902 LINE CR1 628 chrZ 5752045 5753552 CR1-Y4 432 + 5752045 5753552 0 2 123,944, 0,563, +,+, 752920 LINE CR1 628 chrZ 5753784 5755213 CR1-L3A_Croc 308 + 5753784 5755213 0 3 298,219,430, 0,750,999, +,+,+, 752923 LINE CR1 629 chrZ 5780096 5780565 CR1-D2 502 + 5780096 5780565 0 2 239,203, 0,266, +,+, 752958 LINE CR1 629 chrZ 5810391 5811014 CR1-L3A_Croc 254 - 5810391 5811014 0 3 77,23,104, 0,208,519, -,-,-, 753000 LINE CR1 629 chrZ 5836962 5838234 Mariner1_GG 484 - 5836962 5838234 0 2 27,1212, 0,60, -,-, 753035 DNA TcMar-Mariner 629 chrZ 5880739 5882653 CR1-D2 587 - 5880739 5882653 0 2 1060,74, 0,1840, -,-, 753098 LINE CR1 629 chrZ 5881816 5882583 CR1-B2 746 - 5881816 5882583 0 2 679,88, 0,679, -,-, 753099 LINE CR1 629 chrZ 5891956 5892308 GGLTR5B 389 - 5891956 5892308 0 2 224,91, 0,261, -,-, 753116 LTR ERVL 630 chrZ 5921279 5921966 CR1-D 473 + 5921279 5921966 0 2 588,86, 0,601, +,+, 753155 LINE CR1 630 chrZ 5938756 5941945 CR1-D 695 + 5938756 5941945 0 3 311,380,339, 0,643,2850, +,+,+, 753175 LINE CR1 630 chrZ 5948832 5950274 CR1-F2 534 + 5948832 5950274 0 2 479,263, 0,1179, +,+, 753193 LINE CR1 630 chrZ 5964739 5966003 Char12Mar1_GG 268 - 5964739 5966003 0 2 677,184, 0,1080, -,-, 753211 DNA hAT-Charlie 630 chrZ 5977679 5979023 CR1-C4 531 + 5977679 5979023 0 2 1030,314, 0,1030, +,+, 753231 LINE CR1 630 chrZ 6014035 6014372 CR1-C4 361 + 6014035 6014372 0 2 81,202, 0,135, +,+, 753278 LINE CR1 630 chrZ 6020878 6022098 CR1-C4 377 - 6020878 6022098 0 2 78,1142, 0,78, -,-, 753290 LINE CR1 630 chrZ 6023598 6025732 CR1-Y4 482 + 6023598 6025732 0 2 779,805, 0,1329, +,+, 753295 LINE CR1 630 chrZ 6027917 6028807 CR1-C4 529 - 6027917 6028807 0 3 116,45,729, 0,116,161, -,-,-, 753300 LINE CR1 631 chrZ 6051217 6051344 (CTTTT)n 402 + 6051217 6051344 0 2 16,46, 0,81, +,+, 753324 Simple_repeat Simple_repeat 631 chrZ 6052826 6053386 CR1-D2 542 - 6052826 6053386 0 2 199,308, 0,252, -,-, 753330 LINE CR1 631 chrZ 6055350 6056318 CR1-Y4 604 - 6055350 6056318 0 2 270,47, 0,921, -,-, 753336 LINE CR1 631 chrZ 6067517 6068240 CR1-C3 456 - 6067517 6068240 0 2 323,400, 0,323, -,-, 753353 LINE CR1 631 chrZ 6086139 6086953 CR1-F 851 - 6086139 6086953 0 2 281,479, 0,335, -,-, 753381 LINE CR1 631 chrZ 6101236 6102512 CR1-F 904 + 6101236 6102512 0 2 302,974, 0,302, +,+, 753395 LINE CR1 631 chrZ 6133386 6133437 (TATGTG)n 216 + 6133386 6133437 0 2 20,10, 0,41, +,+, 753431 Simple_repeat Simple_repeat 631 chrZ 6133514 6133575 (ATTTT)n 498 + 6133514 6133575 0 2 8,18, 0,43, +,+, 753433 Simple_repeat Simple_repeat 631 chrZ 6157367 6157429 (CCCCCA)n 398 + 6157367 6157429 0 2 26,9, 0,53, +,+, 753465 Simple_repeat Simple_repeat 632 chrZ 6197402 6198521 CR1-C 796 - 6197402 6198521 0 2 388,476, 0,643, -,-, 753508 LINE CR1 632 chrZ 6217895 6220564 CR1-Y4 452 + 6217895 6220564 0 3 88,1064,131, 0,242,2538, +,+,+, 753522 LINE CR1 632 chrZ 6219528 6220437 CR1-C4 563 + 6219528 6220437 0 2 203,377, 0,532, +,+, 753523 LINE CR1 632 chrZ 6264465 6266327 CR1-D2 549 - 6264465 6266327 0 2 777,1085, 0,777, -,-, 753562 LINE CR1 633 chrZ 6354835 6355280 Char12Mar1_GG 659 - 6354835 6355280 0 2 193,237, 0,208, -,-, 753633 DNA hAT-Charlie 633 chrZ 6367426 6368065 CR1-D 741 + 6367426 6368065 0 2 560,79, 0,560, +,+, 753649 LINE CR1 633 chrZ 6418798 6419093 GGLTR5B 570 + 6418798 6419093 0 2 80,122, 0,173, +,+, 753679 LTR ERVL 636 chrZ 6691436 6691707 Char12Mar1_GG 698 - 6691436 6691707 0 2 194,77, 0,194, -,-, 753888 DNA hAT-Charlie 636 chrZ 6746123 6746203 (ATATAC)n 442 + 6746123 6746203 0 2 20,21, 0,59, +,+, 753925 Simple_repeat Simple_repeat 637 chrZ 6836634 6837121 CR1-C 863 + 6836634 6837121 0 2 73,414, 0,73, +,+, 753980 LINE CR1 637 chrZ 6839913 6841019 REP131 278 - 6839913 6841019 0 2 294,101, 0,1005, -,-, 753984 DNA? DNA? 637 chrZ 6841787 6842246 CR1-Y2_Aves 230 - 6841787 6842246 0 2 234,214, 0,245, -,-, 753987 LINE CR1 637 chrZ 6845336 6846668 CR1-L3A_Croc 99 - 6845336 6846668 0 3 158,598,396, 0,289,936, -,-,-, 753989 LINE CR1 637 chrZ 6937146 6937920 CR1-Y2_Aves 446 + 6937146 6937920 0 3 165,191,53, 0,530,721, +,+,+, 754055 LINE CR1 638 chrZ 6949572 6950862 CR1-Y2_Aves 158 - 6949572 6950862 0 2 387,149, 0,1141, -,-, 754063 LINE CR1 638 chrZ 6964428 6965363 CR1-F0 651 - 6964428 6965363 0 3 298,237,400, 0,298,535, -,-,-, 754073 LINE CR1 639 chrZ 7199368 7201075 CR1-C 778 - 7199368 7201075 0 2 498,1203, 0,504, -,-, 754200 LINE CR1 640 chrZ 7224161 7224709 CR1-C3 610 - 7224161 7224709 0 2 24,463, 0,85, -,-, 754216 LINE CR1 640 chrZ 7288705 7289559 CR1-X1 438 - 7288705 7289559 0 2 304,192, 0,662, -,-, 754251 LINE CR1 640 chrZ 7338658 7339496 CR1-E 796 - 7338658 7339496 0 2 417,421, 0,417, -,-, 754278 LINE CR1 641 chrZ 7369299 7370953 CR1-X1 542 - 7369299 7370953 0 3 344,799,282, 0,344,1372, -,-,-, 754299 LINE CR1 641 chrZ 7379287 7380660 CR1-C4 451 + 7379287 7380660 0 2 601,330, 0,1043, +,+, 754314 LINE CR1 641 chrZ 7383259 7384632 CR1-C4 451 + 7383259 7384632 0 2 601,330, 0,1043, +,+, 754319 LINE CR1 641 chrZ 7446703 7448532 CR1-L3B_Croc 174 - 7446703 7448532 0 2 190,234, 0,1595, -,-, 754388 LINE CR1 642 chrZ 7501183 7501985 CR1-L3B_Croc 131 - 7501183 7501985 0 2 366,348, 0,454, -,-, 754425 LINE CR1 642 chrZ 7502923 7503940 CR1-Y2_Aves 357 + 7502923 7503940 0 2 397,187, 0,830, +,+, 754427 LINE CR1 642 chrZ 7503372 7503753 CR1-D 589 - 7503372 7503753 0 2 221,157, 0,224, -,-, 754428 LINE CR1 642 chrZ 7526455 7527889 CR1-D 592 + 7526455 7527889 0 2 609,825, 0,609, +,+, 754440 LINE CR1 642 chrZ 7552955 7553212 GGLTR5B 611 - 7552955 7553212 0 2 102,155, 0,102, -,-, 754453 LTR ERVL 643 chrZ 7712901 7713236 CR1-X 550 - 7712901 7713236 0 2 292,41, 0,294, -,-, 754518 LINE CR1 80 chrZ 7732755 7735066 CR1-G 811 + 7732755 7735066 0 2 1003,1272, 0,1039, +,+, 754531 LINE CR1 644 chrZ 7814903 7816936 CR1-L3A_Croc 195 + 7814903 7816936 0 2 153,359, 0,1674, +,+, 754575 LINE CR1 644 chrZ 7839556 7840065 CR1-X1 593 + 7839556 7840065 0 2 130,379, 0,130, +,+, 754590 LINE CR1 645 chrZ 7918764 7920806 CR1-F 418 - 7918764 7920806 0 2 1324,560, 0,1482, -,-, 754619 LINE CR1 645 chrZ 7976097 7976619 CR1-F2 474 - 7976097 7976619 0 2 249,273, 0,249, -,-, 754665 LINE CR1 80 chrZ 7995214 7997261 CR1-D2 643 + 7995214 7997261 0 3 368,38,81, 0,1927,1966, +,+,+, 754684 LINE CR1 646 chrZ 8032212 8034346 CR1-L3B_Croc 179 - 8032212 8034346 0 2 164,1377, 0,757, -,-, 754712 LINE CR1 646 chrZ 8034836 8035208 CR1-F2 448 + 8034836 8035208 0 2 125,247, 0,125, +,+, 754713 LINE CR1 646 chrZ 8090225 8091694 CR1-L3B_Croc 235 + 8090225 8091694 0 2 170,137, 0,1332, +,+, 754755 LINE CR1 647 chrZ 8160122 8162004 CR1-C4 514 - 8160122 8162004 0 5 187,588,95,253,259, 0,187,782,877,1623, -,-,-,-,-, 754810 LINE CR1 648 chrZ 8385884 8386848 CR1-H 807 - 8385884 8386848 0 2 149,318, 0,646, -,-, 754936 LINE CR1 1 chrZ 8387375 8388834 CR1-F2 441 - 8387375 8388834 0 2 928,518, 0,941, -,-, 754938 LINE CR1 650 chrZ 8526709 8526830 CR1-F2 454 - 8526709 8526830 0 2 25,65, 0,56, -,-, 755072 LINE CR1 650 chrZ 8573111 8574136 CR1-D2 623 - 8573111 8574136 0 2 72,322, 0,703, -,-, 755095 LINE CR1 650 chrZ 8604753 8605315 CR1-Y1_Aves 378 + 8604753 8605315 0 2 82,447, 0,115, +,+, 755108 LINE CR1 650 chrZ 8615933 8616147 CR1-Y2_Aves 340 - 8615933 8616147 0 2 107,89, 0,125, -,-, 755113 LINE CR1 650 chrZ 8634996 8635283 GGLTR8B 725 - 8634996 8635283 0 2 231,56, 0,231, -,-, 755124 LTR ERVL 651 chrZ 8660108 8661328 CR1-C4 318 + 8660108 8661328 0 2 412,808, 0,412, +,+, 755142 LINE CR1 651 chrZ 8706344 8708049 CR1-Y3 521 + 8706344 8708049 0 2 1187,518, 0,1187, +,+, 755165 LINE CR1 651 chrZ 8729186 8730104 Char12Mar1_GG 628 - 8729186 8730104 0 3 473,161,276, 0,476,642, -,-,-, 755171 DNA hAT-Charlie 651 chrZ 8747810 8747924 (TTTTTTC)n 404 + 8747810 8747924 0 2 32,42, 0,72, +,+, 755178 Simple_repeat Simple_repeat 653 chrZ 8914141 8919176 CR1-L3B_Croc 233 - 8914141 8919176 0 2 97,405, 0,4630, -,-, 755253 LINE CR1 653 chrZ 8935058 8936547 CR1-F2 415 - 8935058 8936547 0 2 82,217, 0,1272, -,-, 755270 LINE CR1 653 chrZ 8946644 8946791 G-rich 621 + 8946644 8946791 0 2 40,44, 0,103, +,+, 755277 Low_complexity Low_complexity 653 chrZ 8962266 8962893 CR1-11_Crp 265 + 8962266 8962893 0 2 481,103, 0,524, +,+, 755284 LINE CR1 653 chrZ 9007175 9009302 CR1-D2 578 - 9007175 9009302 0 2 193,1934, 0,193, -,-, 755304 LINE CR1 653 chrZ 9031182 9031592 CR1-C4 418 + 9031182 9031592 0 2 119,289, 0,121, +,+, 755319 LINE CR1 654 chrZ 9146883 9147567 GGERVL-B-int 280 + 9146883 9147567 0 2 571,113, 0,571, +,+, 755399 LTR ERVL 654 chrZ 9154852 9161045 GGERVL-A-int 494 - 9154852 9161045 0 2 728,499, 0,5694, -,-, 755409 LTR ERVL 654 chrZ 9155554 9156855 CR1-D 587 - 9155554 9156855 0 2 656,286, 0,1015, -,-, 755410 LINE CR1 654 chrZ 9156216 9156569 GGLTR3C2 513 + 9156216 9156569 0 2 174,151, 0,202, +,+, 755411 LTR ERVL 654 chrZ 9157248 9159494 CR1-Y4 509 - 9157248 9159494 0 3 846,984,397, 0,846,1849, -,-,-, 755412 LINE CR1 655 chrZ 9219873 9221168 CR1-C4 492 - 9219873 9221168 0 2 348,306, 0,989, -,-, 755448 LINE CR1 655 chrZ 9220230 9220865 CR1-D2 568 + 9220230 9220865 0 2 85,550, 0,85, +,+, 755449 LINE CR1 655 chrZ 9231941 9231993 GA-rich 346 + 9231941 9231993 0 2 11,19, 0,33, +,+, 755455 Low_complexity Low_complexity 655 chrZ 9251526 9253185 CR1-X1 549 - 9251526 9253185 0 2 303,1356, 0,303, -,-, 755470 LINE CR1 655 chrZ 9278875 9279140 CR1-E 675 - 9278875 9279140 0 2 82,183, 0,82, -,-, 755478 LINE CR1 657 chrZ 9559027 9560504 Char12Mar1_GG 580 - 9559027 9560504 0 2 268,298, 0,1179, -,-, 755638 DNA hAT-Charlie 659 chrZ 9704508 9705061 CR1-C4 586 + 9704508 9705061 0 2 121,432, 0,121, +,+, 755704 LINE CR1 659 chrZ 9819721 9820551 Char12Mar1_GG 527 - 9819721 9820551 0 2 141,169, 0,661, -,-, 755769 DNA hAT-Charlie 659 chrZ 9828118 9828658 CR1-F 565 + 9828118 9828658 0 2 90,450, 0,90, +,+, 755779 LINE CR1 660 chrZ 9872177 9873254 CR1-X1 473 + 9872177 9873254 0 3 155,295,213, 0,569,864, +,+,+, 755809 LINE CR1 660 chrZ 9928561 9929583 CR1-F0 663 + 9928561 9929583 0 2 794,41, 0,981, +,+, 755832 LINE CR1 662 chrZ 10126067 10126524 CR1-Y2_Aves 305 + 10126067 10126524 0 2 272,157, 0,300, +,+, 755950 LINE CR1 662 chrZ 10163270 10177342 REP131 219 - 10163270 10177342 0 2 101,198, 0,13874, -,-, 755974 DNA? DNA? 662 chrZ 10176763 10176944 A-rich 493 + 10176763 10176944 0 2 57,81, 0,100, +,+, 755984 Low_complexity Low_complexity 662 chrZ 10214346 10214762 Char12Mar1_GG 681 - 10214346 10214762 0 2 66,348, 0,68, -,-, 756003 DNA hAT-Charlie 662 chrZ 10215314 10215648 TguLTR5d 448 + 10215314 10215648 0 2 72,114, 0,220, +,+, 756004 LTR ERVL 662 chrZ 10217932 10218772 CR1-D2 568 - 10217932 10218772 0 2 353,487, 0,353, -,-, 756009 LINE CR1 82 chrZ 10223248 10225151 Charlie12_GG 562 + 10223248 10225151 0 2 1302,574, 0,1329, +,+, 756013 DNA hAT-Charlie 663 chrZ 10269823 10270441 CR1-Y3 680 - 10269823 10270441 0 2 64,554, 0,64, -,-, 756044 LINE CR1 663 chrZ 10322564 10324639 CR1-Y2_Aves 279 + 10322564 10324639 0 2 142,1063, 0,1012, +,+, 756081 LINE CR1 663 chrZ 10322699 10323645 CR1-Y4 429 - 10322699 10323645 0 2 434,512, 0,434, -,-, 756082 LINE CR1 664 chrZ 10363289 10366495 CR1-F2 600 - 10363289 10366495 0 2 761,188, 0,3018, -,-, 756106 LINE CR1 664 chrZ 10364056 10366310 CR1-D 573 + 10364056 10366310 0 2 426,1828, 0,426, +,+, 756108 LINE CR1 664 chrZ 10408074 10408416 Char12Mar1_GG 592 + 10408074 10408416 0 2 223,88, 0,254, +,+, 756124 DNA hAT-Charlie 664 chrZ 10413852 10415049 CR1-D 632 + 10413852 10415049 0 2 610,587, 0,610, +,+, 756130 LINE CR1 664 chrZ 10462826 10463671 CR1-F2 568 + 10462826 10463671 0 2 699,130, 0,715, +,+, 756161 LINE CR1 665 chrZ 10505097 10505482 CR1-E 717 + 10505097 10505482 0 2 89,296, 0,89, +,+, 756188 LINE CR1 665 chrZ 10516723 10517986 CR1-X1 77 + 10516723 10517986 0 2 515,748, 0,515, +,+, 756190 LINE CR1 665 chrZ 10552392 10553270 CR1-F2 294 - 10552392 10553270 0 2 433,173, 0,705, -,-, 756209 LINE CR1 665 chrZ 10599191 10602677 CR1-E 695 + 10599191 10602677 0 2 725,2084, 0,1402, +,+, 756242 LINE CR1 665 chrZ 10613514 10614577 CR1-X 344 + 10613514 10614577 0 2 87,787, 0,276, +,+, 756249 LINE CR1 666 chrZ 10627925 10628737 GGLTR5A 420 + 10627925 10628737 0 2 247,73, 0,739, +,+, 756258 LTR ERVL 666 chrZ 10666424 10667087 GGLTR5A 409 - 10666424 10667087 0 2 138,373, 0,290, -,-, 756284 LTR ERVL 666 chrZ 10669898 10671053 CR1-X1 703 - 10669898 10671053 0 2 59,314, 0,841, -,-, 756289 LINE CR1 666 chrZ 10711752 10713975 CR1-X2 166 + 10711752 10713975 0 2 1150,1060, 0,1163, +,+, 756315 LINE CR1 666 chrZ 10715017 10718164 CR1-C4 504 - 10715017 10718164 0 4 1185,1242,271,396, 0,1210,2452,2751, -,-,-,-, 756316 LINE CR1 666 chrZ 10725522 10728774 CR1-Y2_Aves 118 - 10725522 10728774 0 2 380,187, 0,3065, -,-, 756329 LINE CR1 667 chrZ 10751452 10752157 CR1-C4 551 - 10751452 10752157 0 2 513,192, 0,513, -,-, 756346 LINE CR1 667 chrZ 10760313 10760634 CR1-C4 453 + 10760313 10760634 0 2 190,131, 0,190, +,+, 756352 LINE CR1 667 chrZ 10763914 10764327 CR1-D2 645 + 10763914 10764327 0 2 193,220, 0,193, +,+, 756359 LINE CR1 667 chrZ 10767830 10767906 (AAC)n 948 + 10767830 10767906 0 2 26,20, 0,56, +,+, 756365 Simple_repeat Simple_repeat 667 chrZ 10774304 10776854 GGLTR3C1 640 + 10774304 10776854 0 2 2012,538, 0,2012, +,+, 756374 LTR ERVL 667 chrZ 10782720 10785078 ENS3-int 258 + 10782720 10785078 0 3 412,92,1221, 0,1043,1137, +,+,+, 756384 LTR ERVL 667 chrZ 10854925 10858471 CR1-F2 371 + 10854925 10858471 0 2 941,481, 0,3065, +,+, 756436 LINE CR1 667 chrZ 10866159 10866719 CR1-L3A_Croc 201 + 10866159 10866719 0 2 98,140, 0,420, +,+, 756448 LINE CR1 667 chrZ 10870022 10870727 CR1-X 335 - 10870022 10870727 0 2 585,120, 0,585, -,-, 756451 LINE CR1 668 chrZ 10928517 10929077 CR1-Y1_Aves 630 - 10928517 10929077 0 2 42,54, 0,506, -,-, 756485 LINE CR1 668 chrZ 10954075 10961032 GGLTR3A 845 + 10954075 10961032 0 4 527,5819,51,524, 0,527,6382,6433, +,+,+,+, 756506 LTR ERVL 668 chrZ 10962454 10963588 CR1-C4 296 + 10962454 10963588 0 2 576,555, 0,579, +,+, 756508 LINE CR1 668 chrZ 10966498 10970971 GGLTR7-int 508 + 10966498 10970971 0 4 323,481,2187,590, 0,583,1696,3883, +,+,+,+, 756512 LTR ERV1 668 chrZ 11005308 11005681 GGLTR3C1 553 - 11005308 11005681 0 2 317,56, 0,317, -,-, 756533 LTR ERVL 669 chrZ 11056263 11057529 CR1-E 743 + 11056263 11057529 0 2 965,292, 0,974, +,+, 756571 LINE CR1 669 chrZ 11103831 11105585 CR1-L3A_Croc 239 + 11103831 11105585 0 3 265,141,91, 0,1104,1663, +,+,+, 756603 LINE CR1 669 chrZ 11111065 11111737 CR1-Y2_Aves 292 + 11111065 11111737 0 2 224,448, 0,224, +,+, 756606 LINE CR1 669 chrZ 11112941 11113280 CR1-D2 673 - 11112941 11113280 0 2 221,118, 0,221, -,-, 756607 LINE CR1 669 chrZ 11117070 11117328 CR1-X2 558 - 11117070 11117328 0 2 162,92, 0,166, -,-, 756610 LINE CR1 669 chrZ 11117322 11118751 CR1-E 674 + 11117322 11118751 0 2 260,1160, 0,269, +,+, 756611 LINE CR1 669 chrZ 11131070 11132502 CR1-Y 394 + 11131070 11132502 0 2 111,760, 0,672, +,+, 756626 LINE CR1 670 chrZ 11143899 11145750 CR1-C4 562 - 11143899 11145750 0 2 277,320, 0,1531, -,-, 756640 LINE CR1 670 chrZ 11150344 11151676 CR1-Y4 496 + 11150344 11151676 0 2 1149,183, 0,1149, +,+, 756644 LINE CR1 670 chrZ 11223688 11223755 A-rich 322 + 11223688 11223755 0 2 27,20, 0,47, +,+, 756678 Low_complexity Low_complexity 670 chrZ 11237288 11237629 CR1-D2 725 + 11237288 11237629 0 2 300,36, 0,305, +,+, 756686 LINE CR1 670 chrZ 11259174 11260608 CR1-F2 567 - 11259174 11260608 0 2 860,478, 0,956, -,-, 756703 LINE CR1 670 chrZ 11268326 11269528 CR1-C4 395 - 11268326 11269528 0 2 365,816, 0,386, -,-, 756710 LINE CR1 671 chrZ 11285358 11287909 CR1-C4 556 - 11285358 11287909 0 2 808,1743, 0,808, -,-, 756724 LINE CR1 671 chrZ 11340529 11340821 GGERVL-C-int 395 - 11340529 11340821 0 2 120,137, 0,155, -,-, 756779 LTR ERVL 671 chrZ 11371275 11374967 CR1-X1 256 + 11371275 11374967 0 4 277,186,1160,596, 0,1748,1934,3096, +,+,+,+, 756815 LINE CR1 671 chrZ 11371558 11372912 CR1-F2 359 - 11371558 11372912 0 2 715,639, 0,715, -,-, 756816 LINE CR1 672 chrZ 11427230 11428333 CR1-Y1_Aves 421 - 11427230 11428333 0 2 89,1009, 0,94, -,-, 756854 LINE CR1 672 chrZ 11428523 11429777 CR1-Y2_Aves 227 - 11428523 11429777 0 2 616,638, 0,616, -,-, 756856 LINE CR1 672 chrZ 11436927 11438006 GGLTR8A 476 - 11436927 11438006 0 2 816,223, 0,856, -,-, 756861 LTR ERVL 672 chrZ 11475678 11477424 CR1-F 847 - 11475678 11477424 0 2 322,1424, 0,322, -,-, 756884 LINE CR1 672 chrZ 11477930 11478477 CR1-X2 651 + 11477930 11478477 0 2 116,431, 0,116, +,+, 756885 LINE CR1 672 chrZ 11485329 11488490 CR1-B 708 + 11485329 11488490 0 2 1366,1525, 0,1636, +,+, 756888 LINE CR1 673 chrZ 11614506 11616692 CR1-D 603 - 11614506 11616692 0 2 1423,276, 0,1910, -,-, 756967 LINE CR1 673 chrZ 11619098 11620677 CR1-D2 550 + 11619098 11620677 0 2 978,163, 0,1416, +,+, 756969 LINE CR1 673 chrZ 11638493 11638852 Char12Mar1_GG 669 - 11638493 11638852 0 2 58,301, 0,58, -,-, 756980 DNA hAT-Charlie 673 chrZ 11652387 11652825 GGLTR5A 240 + 11652387 11652825 0 2 242,143, 0,295, +,+, 756987 LTR ERVL 673 chrZ 11653570 11653638 (TGTATA)n 318 + 11653570 11653638 0 2 14,30, 0,38, +,+, 756989 Simple_repeat Simple_repeat 674 chrZ 11697858 11698707 CR1-Y2_Aves 253 - 11697858 11698707 0 2 566,245, 0,604, -,-, 757019 LINE CR1 674 chrZ 11783665 11783713 (TTTC)n 636 + 11783665 11783713 0 2 13,7, 0,41, +,+, 757069 Simple_repeat Simple_repeat 674 chrZ 11784665 11785735 CR1-C2 783 + 11784665 11785735 0 2 615,455, 0,615, +,+, 757071 LINE CR1 674 chrZ 11793365 11793770 Char12Mar1_GG 651 - 11793365 11793770 0 2 140,205, 0,200, -,-, 757078 DNA hAT-Charlie 675 chrZ 11820790 11822252 CR1-C4 503 - 11820790 11822252 0 2 1378,84, 0,1378, -,-, 757094 LINE CR1 675 chrZ 11825000 11825276 (TTCC)n 731 + 11825000 11825276 0 2 71,205, 0,71, +,+, 757095 Simple_repeat Simple_repeat 675 chrZ 11860326 11861386 CR1-C2 765 - 11860326 11861386 0 2 519,541, 0,519, -,-, 757112 LINE CR1 675 chrZ 11866357 11867881 CR1-X1 642 - 11866357 11867881 0 2 216,220, 0,1304, -,-, 757116 LINE CR1 675 chrZ 11900750 11901475 CR1-X1 528 + 11900750 11901475 0 2 179,518, 0,207, +,+, 757142 LINE CR1 675 chrZ 11915936 11917938 CR1-C4 547 + 11915936 11917938 0 2 859,1143, 0,859, +,+, 757159 LINE CR1 676 chrZ 11930355 11931342 CR1-Y2_Aves 237 + 11930355 11931342 0 2 223,756, 0,231, +,+, 757171 LINE CR1 676 chrZ 11995937 11997221 Char12Mar1_GG 587 - 11995937 11997221 0 2 1240,44, 0,1240, -,-, 757208 DNA hAT-Charlie 676 chrZ 12011259 12011359 (A)n 726 + 12011259 12011359 0 2 46,25, 0,75, +,+, 757216 Simple_repeat Simple_repeat 677 chrZ 12082663 12083705 CR1-D2 504 + 12082663 12083705 0 2 658,352, 0,690, +,+, 757253 LINE CR1 677 chrZ 12104716 12106558 CR1-D2 498 - 12104716 12106558 0 2 362,1480, 0,362, -,-, 757266 LINE CR1 677 chrZ 12113580 12115936 CR1-F 898 - 12113580 12115936 0 2 546,1810, 0,546, -,-, 757272 LINE CR1 677 chrZ 12172863 12173977 CR1-C4 404 + 12172863 12173977 0 2 515,599, 0,515, +,+, 757314 LINE CR1 678 chrZ 12227366 12229753 CR1-C 780 + 12227366 12229753 0 2 1116,1271, 0,1116, +,+, 757341 LINE CR1 679 chrZ 12396443 12397885 CR1-C4 537 - 12396443 12397885 0 2 1259,183, 0,1259, -,-, 757432 LINE CR1 680 chrZ 12465827 12466297 GGLTR5B 724 + 12465827 12466297 0 2 370,58, 0,412, +,+, 757483 LTR ERVL 680 chrZ 12500000 12501400 CR1-C 775 - 12500000 12501400 0 2 952,216, 0,1184, -,-, 757510 LINE CR1 680 chrZ 12527605 12528648 CR1-Y 347 - 12527605 12528648 0 2 682,361, 0,682, -,-, 757530 LINE CR1 680 chrZ 12540657 12541265 CR1-Y1_Aves 296 - 12540657 12541265 0 3 177,89,240, 0,218,368, -,-,-, 757542 LINE CR1 681 chrZ 12613684 12614330 CR1-Y4 448 + 12613684 12614330 0 2 336,182, 0,464, +,+, 757593 LINE CR1 681 chrZ 12676178 12676549 Char12Mar1_GG 643 - 12676178 12676549 0 2 166,205, 0,166, -,-, 757636 DNA hAT-Charlie 681 chrZ 12702312 12703332 CR1-C4 471 + 12702312 12703332 0 2 63,937, 0,83, +,+, 757650 LINE CR1 681 chrZ 12709408 12709779 CR1-B2 101 - 12709408 12709779 0 2 290,53, 0,318, -,-, 757655 LINE CR1 682 chrZ 12734251 12734824 CR1-Y4 447 + 12734251 12734824 0 2 90,455, 0,118, +,+, 757675 LINE CR1 682 chrZ 12757819 12758636 CR1-C4 590 - 12757819 12758636 0 2 70,747, 0,70, -,-, 757695 LINE CR1 682 chrZ 12765175 12766487 CR1-D2 661 + 12765175 12766487 0 2 177,1006, 0,306, +,+, 757700 LINE CR1 682 chrZ 12791984 12793712 CR1-C4 491 + 12791984 12793712 0 2 87,1327, 0,401, +,+, 757725 LINE CR1 682 chrZ 12798162 12801180 CR1-X 203 + 12798162 12801180 0 2 326,967, 0,2051, +,+, 757731 LINE CR1 683 chrZ 12853713 12857335 Char12Mar1_GG 532 - 12853713 12857335 0 2 84,384, 0,3238, -,-, 757779 DNA hAT-Charlie 683 chrZ 12880519 12880582 (ACA)n 360 + 12880519 12880582 0 2 24,16, 0,47, +,+, 757794 Simple_repeat Simple_repeat 684 chrZ 13035867 13036529 CR1-D 612 + 13035867 13036529 0 2 95,567, 0,95, +,+, 757880 LINE CR1 684 chrZ 13037135 13038216 CR1-E 719 - 13037135 13038216 0 2 164,692, 0,389, -,-, 757883 LINE CR1 684 chrZ 13038653 13039408 CR1-11_Crp 303 - 13038653 13039408 0 2 410,158, 0,597, -,-, 757885 LINE CR1 684 chrZ 13050716 13053398 CR1-Y4 428 + 13050716 13053398 0 4 698,473,462,213, 0,999,1472,2469, +,+,+,+, 757893 LINE CR1 684 chrZ 13064253 13065423 GGLTR5A 428 + 13064253 13065423 0 2 265,201, 0,969, +,+, 757903 LTR ERVL 684 chrZ 13088617 13089787 CR1-C 857 + 13088617 13089787 0 2 1111,59, 0,1111, +,+, 757922 LINE CR1 684 chrZ 13104138 13105063 CR1-X1 506 - 13104138 13105063 0 2 175,750, 0,175, -,-, 757930 LINE CR1 685 chrZ 13117321 13120965 CR1-Y 456 + 13117321 13120965 0 2 121,1576, 0,2068, +,+, 757940 LINE CR1 685 chrZ 13122377 13123330 CR1-C4 549 - 13122377 13123330 0 2 223,414, 0,539, -,-, 757944 LINE CR1 685 chrZ 13138953 13140827 CR1-L3B_Croc 241 + 13138953 13140827 0 3 237,365,95, 0,1101,1779, +,+,+, 757960 LINE CR1 685 chrZ 13142379 13142467 GGLTR3B4 831 + 13142379 13142467 0 2 60,28, 0,60, +,+, 757962 LTR ERVL 685 chrZ 13151698 13152618 CR1-Y4 424 + 13151698 13152618 0 2 626,123, 0,797, +,+, 757970 LINE CR1 685 chrZ 13167037 13170162 CR1-F 869 + 13167037 13170162 0 2 1869,669, 0,2456, +,+, 757988 LINE CR1 685 chrZ 13170161 13171049 CR1-D2 705 + 13170161 13171049 0 2 237,150, 0,738, +,+, 757990 LINE CR1 685 chrZ 13181210 13183338 CR1-D2 608 + 13181210 13183338 0 2 900,752, 0,1376, +,+, 757996 LINE CR1 685 chrZ 13227837 13228945 CR1-C2 665 - 13227837 13228945 0 2 441,667, 0,441, -,-, 758035 LINE CR1 685 chrZ 13236139 13237914 CR1-Y2 764 + 13236139 13237914 0 2 403,358, 0,1417, +,+, 758045 LINE CR1 686 chrZ 13287740 13289630 CR1-F2 586 - 13287740 13289630 0 2 271,910, 0,980, -,-, 758086 LINE CR1 686 chrZ 13288011 13288720 ENS1-LTR 387 - 13288011 13288720 0 2 379,319, 0,390, -,-, 758087 LTR ERVL 686 chrZ 13322711 13323883 CR1-C3 580 - 13322711 13323883 0 2 419,100, 0,1072, -,-, 758114 LINE CR1 686 chrZ 13328213 13328694 TguLTR5d 331 - 13328213 13328694 0 2 119,353, 0,128, -,-, 758118 LTR ERVL 686 chrZ 13340530 13341809 CR1-Y1_Aves 202 + 13340530 13341809 0 2 513,404, 0,875, +,+, 758133 LINE CR1 686 chrZ 13343274 13344073 CR1-H 801 - 13343274 13344073 0 2 273,526, 0,273, -,-, 758136 LINE CR1 686 chrZ 13356699 13357474 CR1-E 643 - 13356699 13357474 0 2 305,470, 0,305, -,-, 758147 LINE CR1 687 chrZ 13370458 13371813 GGLTR5A 514 - 13370458 13371813 0 2 65,481, 0,874, -,-, 758151 LTR ERVL 687 chrZ 13378130 13380314 CR1-D 440 + 13378130 13380314 0 2 593,1591, 0,593, +,+, 758155 LINE CR1 687 chrZ 13472576 13472681 GA-rich 160 + 13472576 13472681 0 2 65,11, 0,94, +,+, 758208 Low_complexity Low_complexity 687 chrZ 13482500 13483514 CR1-C4 676 + 13482500 13483514 0 3 332,570,109, 0,333,905, +,+,+, 758214 LINE CR1 688 chrZ 13500639 13500759 (T)n 711 + 13500639 13500759 0 2 38,45, 0,75, +,+, 758219 Simple_repeat Simple_repeat 688 chrZ 13507465 13508636 CR1-X2 590 + 13507465 13508636 0 2 688,483, 0,688, +,+, 758222 LINE CR1 688 chrZ 13563983 13565410 CR1-C4 541 - 13563983 13565410 0 2 970,439, 0,988, -,-, 758253 LINE CR1 688 chrZ 13573170 13576065 CR1-X1 270 - 13573170 13576065 0 2 739,208, 0,2687, -,-, 758259 LINE CR1 689 chrZ 13672240 13673903 CR1-Y1_Aves 361 - 13672240 13673903 0 2 337,1323, 0,340, -,-, 758317 LINE CR1 689 chrZ 13718867 13719316 GGLTR5A 256 + 13718867 13719316 0 2 287,151, 0,298, +,+, 758353 LTR ERVL 689 chrZ 13726459 13728572 CR1-C4 540 + 13726459 13728572 0 2 709,551, 0,1562, +,+, 758360 LINE CR1 690 chrZ 13804069 13804970 CR1-Y1_Aves 460 - 13804069 13804970 0 2 79,819, 0,82, -,-, 758412 LINE CR1 690 chrZ 13811696 13814801 CR1-X 316 + 13811696 13814801 0 5 882,220,299,1047,186, 0,882,1398,1728,2919, +,+,+,+,+, 758415 LINE CR1 690 chrZ 13820316 13826428 GGERVL-C-int 601 + 13820316 13826428 0 5 568,1096,32,1621,563, 0,569,2388,3928,5549, +,+,+,+,+, 758424 LTR ERVL 690 chrZ 13821981 13824249 GGERVL-A-int 814 + 13821981 13824249 0 2 723,1543, 0,725, +,+, 758425 LTR ERVL 690 chrZ 13856445 13858172 CR1-C4 401 + 13856445 13858172 0 3 501,77,221, 0,555,1506, +,+,+, 758441 LINE CR1 690 chrZ 13868510 13869837 CR1-D 698 - 13868510 13869837 0 2 1001,316, 0,1011, -,-, 758452 LINE CR1 690 chrZ 13878861 13880776 GGERVL-C-int 305 + 13878861 13880776 0 3 1033,352,530, 0,1033,1385, +,+,+, 758464 LTR ERVL 692 chrZ 14118179 14119432 CR1-F2 405 - 14118179 14119432 0 2 668,259, 0,994, -,-, 758634 LINE CR1 692 chrZ 14139920 14141542 CR1-C4 493 + 14139920 14141542 0 2 231,1094, 0,528, +,+, 758650 LINE CR1 693 chrZ 14170814 14172772 CR1-F 350 + 14170814 14172772 0 2 909,1049, 0,909, +,+, 758679 LINE CR1 693 chrZ 14172852 14173776 CR1-C4 669 + 14172852 14173776 0 2 402,483, 0,441, +,+, 758680 LINE CR1 693 chrZ 14174325 14175660 GGLTR7-int 96 + 14174325 14175660 0 2 62,464, 0,871, +,+, 758682 LTR ERV1 693 chrZ 14190357 14193020 CR1-Y3 609 - 14190357 14193020 0 2 1047,855, 0,1808, -,-, 758696 LINE CR1 693 chrZ 14197585 14198907 CR1-Y4 543 + 14197585 14198907 0 2 188,1011, 0,311, +,+, 758703 LINE CR1 693 chrZ 14204690 14206180 CR1-C3 539 - 14204690 14206180 0 2 586,251, 0,1239, -,-, 758710 LINE CR1 693 chrZ 14268543 14272031 CR1-C4 595 - 14268543 14272031 0 2 780,693, 0,2795, -,-, 758755 LINE CR1 693 chrZ 14269323 14271321 CR1-Y2 726 - 14269323 14271321 0 2 324,579, 0,1419, -,-, 758756 LINE CR1 693 chrZ 14282253 14283863 CR1-E 541 - 14282253 14283863 0 2 471,99, 0,1511, -,-, 758763 LINE CR1 694 chrZ 14300867 14302420 CR1-F2 489 + 14300867 14302420 0 2 1179,374, 0,1179, +,+, 758776 LINE CR1 694 chrZ 14324939 14326020 GGLTR5B 564 - 14324939 14326020 0 2 183,372, 0,709, -,-, 758803 LTR ERVL 694 chrZ 14335555 14335919 GGLTR5B 445 + 14335555 14335919 0 2 82,243, 0,121, +,+, 758817 LTR ERVL 694 chrZ 14352531 14353566 GGLTR5A 440 + 14352531 14353566 0 2 391,83, 0,952, +,+, 758831 LTR ERVL 694 chrZ 14358242 14359324 CR1-D2 625 + 14358242 14359324 0 2 78,1004, 0,78, +,+, 758839 LINE CR1 694 chrZ 14369927 14370000 (CTTTTT)n 396 + 14369927 14370000 0 2 19,18, 0,55, +,+, 758845 Simple_repeat Simple_repeat 694 chrZ 14400098 14400729 CR1-Y2_Aves 143 - 14400098 14400729 0 2 181,261, 0,370, -,-, 758876 LINE CR1 694 chrZ 14404783 14405200 ENS1-LTR 883 - 14404783 14405200 0 2 181,236, 0,181, -,-, 758879 LTR ERVL 694 chrZ 14414512 14414743 (TA)n 631 + 14414512 14414743 0 3 44,66,53, 0,98,178, +,+,+, 758887 Simple_repeat Simple_repeat 695 chrZ 14428305 14429274 CR1-F2 505 - 14428305 14429274 0 2 288,681, 0,288, -,-, 758897 LINE CR1 695 chrZ 14430800 14431463 CR1-Y2_Aves 253 + 14430800 14431463 0 2 430,154, 0,509, +,+, 758899 LINE CR1 695 chrZ 14431466 14432271 CR1-Y1_Aves 473 + 14431466 14432271 0 2 677,127, 0,678, +,+, 758902 LINE CR1 695 chrZ 14479376 14481719 CR1-C4 535 + 14479376 14481719 0 2 1628,715, 0,1628, +,+, 758933 LINE CR1 696 chrZ 14668657 14669043 CR1-E 484 - 14668657 14669043 0 2 112,162, 0,224, -,-, 759063 LINE CR1 10 chrZ 14678481 14682519 CR1-F 452 - 14678481 14682519 0 2 2736,461, 0,3577, -,-, 759073 LINE CR1 697 chrZ 14713285 14714802 CR1-Y3 662 + 14713285 14714802 0 2 443,203, 0,1314, +,+, 759108 LINE CR1 697 chrZ 14721877 14725366 CR1-C 822 + 14721877 14725366 0 2 2824,665, 0,2824, +,+, 759113 LINE CR1 697 chrZ 14777632 14780098 CR1-D 578 + 14777632 14780098 0 2 424,2042, 0,424, +,+, 759148 LINE CR1 697 chrZ 14785210 14787176 CR1-F2 420 + 14785210 14787176 0 2 1226,739, 0,1227, +,+, 759152 LINE CR1 698 chrZ 14827375 14828886 CR1-Y4 463 + 14827375 14828886 0 2 321,993, 0,518, +,+, 759182 LINE CR1 698 chrZ 14827696 14829370 CR1-C4 303 + 14827696 14829370 0 2 250,424, 0,1250, +,+, 759183 LINE CR1 699 chrZ 15032069 15033121 CR1-D 508 - 15032069 15033121 0 2 144,887, 0,165, -,-, 759331 LINE CR1 700 chrZ 15095490 15095597 (AT)n 378 + 15095490 15095597 0 2 19,13, 0,94, +,+, 759383 Simple_repeat Simple_repeat 700 chrZ 15104524 15104814 Chompy-6_Croc 136 + 15104524 15104814 0 2 75,68, 0,222, +,+, 759393 DNA PIF-Harbinger 700 chrZ 15109926 15110717 CR1-Y1_Aves 294 - 15109926 15110717 0 2 128,104, 0,687, -,-, 759399 LINE CR1 700 chrZ 15116772 15119377 CR1-X 438 + 15116772 15119377 0 2 535,1577, 0,1028, +,+, 759404 LINE CR1 700 chrZ 15143256 15143350 (CTTTCT)n 518 + 15143256 15143350 0 2 25,10, 0,84, +,+, 759425 Simple_repeat Simple_repeat 700 chrZ 15166784 15167238 CR1-C4 383 + 15166784 15167238 0 2 319,122, 0,332, +,+, 759458 LINE CR1 701 chrZ 15207192 15209777 CR1-Y4 492 - 15207192 15209777 0 2 1192,88, 0,2497, -,-, 759493 LINE CR1 701 chrZ 15215044 15219094 CR1-C4 354 - 15215044 15219094 0 4 1035,705,445,244, 0,1169,3361,3806, -,-,-,-, 759503 LINE CR1 701 chrZ 15223498 15224023 CR1-F2 551 + 15223498 15224023 0 2 154,371, 0,154, +,+, 759508 LINE CR1 701 chrZ 15241609 15241724 CR1-F2 578 + 15241609 15241724 0 2 68,47, 0,68, +,+, 759522 LINE CR1 701 chrZ 15284988 15285057 (TTATTGAT)n 440 + 15284988 15285057 0 2 8,29, 0,40, +,+, 759557 Simple_repeat Simple_repeat 701 chrZ 15327853 15328790 CR1-C4 450 - 15327853 15328790 0 2 149,788, 0,149, -,-, 759591 LINE CR1 702 chrZ 15342474 15346154 Char12Mar1_GG 492 - 15342474 15346154 0 2 463,771, 0,2909, -,-, 759611 DNA hAT-Charlie 702 chrZ 15388696 15388811 (T)n 883 + 15388696 15388811 0 2 32,28, 0,87, +,+, 759663 Simple_repeat Simple_repeat 702 chrZ 15426540 15428479 CR1-C3 592 - 15426540 15428479 0 2 341,804, 0,1135, -,-, 759693 LINE CR1 702 chrZ 15426881 15427616 ENS1B-LTR 513 - 15426881 15427616 0 2 462,45, 0,690, -,-, 759694 LTR ERVL 702 chrZ 15446927 15449606 CR1-Y4 361 - 15446927 15449606 0 3 192,1845,371, 0,194,2308, -,-,-, 759714 LINE CR1 702 chrZ 15456171 15457898 CR1-D2 467 - 15456171 15457898 0 2 917,396, 0,1331, -,-, 759721 LINE CR1 703 chrZ 15501551 15502057 GGLTR5A 198 - 15501551 15502057 0 2 244,186, 0,320, -,-, 759761 LTR ERVL 703 chrZ 15505294 15505582 CR1-D 725 - 15505294 15505582 0 2 58,230, 0,58, -,-, 759765 LINE CR1 703 chrZ 15512293 15517578 CR1-F2 478 + 15512293 15517578 0 3 703,1664,74, 0,1327,5211, +,+,+, 759778 LINE CR1 703 chrZ 15523304 15524183 CR1-L3B_Croc 316 - 15523304 15524183 0 3 288,49,347, 0,450,532, -,-,-, 759788 LINE CR1 703 chrZ 15529514 15529560 (TTCATTT)n 460 + 15529514 15529560 0 2 17,11, 0,35, +,+, 759794 Simple_repeat Simple_repeat 703 chrZ 15559664 15560023 Char12Mar1_GG 644 - 15559664 15560023 0 2 284,21, 0,338, -,-, 759831 DNA hAT-Charlie 703 chrZ 15562194 15565978 CR1-F2 562 - 15562194 15565978 0 3 568,242,849, 0,2686,2935, -,-,-, 759836 LINE CR1 703 chrZ 15587258 15588004 CR1-Y2_Aves 88 - 15587258 15588004 0 2 281,398, 0,348, -,-, 759858 LINE CR1 704 chrZ 15609141 15609516 CR1-F 275 - 15609141 15609516 0 2 185,72, 0,303, -,-, 759881 LINE CR1 704 chrZ 15611473 15611583 A-rich 541 + 15611473 15611583 0 2 40,55, 0,55, +,+, 759885 Low_complexity Low_complexity 704 chrZ 15627073 15628393 Mariner1_GG 514 - 15627073 15628393 0 2 410,883, 0,437, -,-, 759900 DNA TcMar-Mariner 704 chrZ 15674158 15676721 CR1-X2 237 + 15674158 15676721 0 2 114,487, 0,2076, +,+, 759934 LINE CR1 704 chrZ 15674504 15675514 CR1-Y2_Aves 293 + 15674504 15675514 0 2 182,272, 0,738, +,+, 759936 LINE CR1 704 chrZ 15686391 15686912 GGLTR3B4 374 + 15686391 15686912 0 2 316,161, 0,360, +,+, 759949 LTR ERVL 704 chrZ 15718838 15719742 CR1-Y4 390 - 15718838 15719742 0 2 78,823, 0,81, -,-, 759970 LINE CR1 705 chrZ 15752768 15753299 CR1-C4 530 + 15752768 15753299 0 2 312,219, 0,312, +,+, 760002 LINE CR1 705 chrZ 15770014 15771246 CR1-E 751 - 15770014 15771246 0 2 304,921, 0,311, -,-, 760015 LINE CR1 705 chrZ 15832231 15835133 CR1-C4 617 - 15832231 15835133 0 3 1557,51,473, 0,2347,2429, -,-,-, 760051 LINE CR1 705 chrZ 15850292 15851493 CR1-D 697 + 15850292 15851493 0 2 482,719, 0,482, +,+, 760064 LINE CR1 705 chrZ 15852073 15852947 CR1-C3 669 + 15852073 15852947 0 3 81,100,203, 0,568,671, +,+,+, 760066 LINE CR1 705 chrZ 15856386 15857654 CR1-F2 613 + 15856386 15857654 0 2 915,130, 0,1138, +,+, 760070 LINE CR1 706 chrZ 15982755 15983546 CR1-G 828 + 15982755 15983546 0 3 44,426,258, 0,107,533, +,+,+, 760159 LINE CR1 707 chrZ 15995025 15998018 CR1-Y3 505 + 15995025 15998018 0 2 2315,678, 0,2315, +,+, 760170 LINE CR1 707 chrZ 16014867 16015657 CR1-F2 301 + 16014867 16015657 0 2 457,333, 0,457, +,+, 760185 LINE CR1 707 chrZ 16019482 16025171 GGLTR3E3 751 + 16019482 16025171 0 4 522,3461,1149,557, 0,522,3983,5132, +,+,+,+, 760190 LTR ERVL 707 chrZ 16056568 16057776 CR1-13_AMi 143 + 16056568 16057776 0 2 165,277, 0,931, +,+, 760213 LINE CR1 707 chrZ 16079696 16079750 (AAC)n 412 + 16079696 16079750 0 2 27,10, 0,44, +,+, 760235 Simple_repeat Simple_repeat 88 chrZ 16115357 16123706 CR1-F2 380 + 16115357 16123706 0 2 94,117, 0,8232, +,+, 760269 LINE CR1 708 chrZ 16164461 16166294 CR1-C4 500 + 16164461 16166294 0 2 464,1369, 0,464, +,+, 760294 LINE CR1 709 chrZ 16375374 16375645 CR1-Y4 777 - 16375374 16375645 0 2 99,170, 0,101, -,-, 760414 LINE CR1 710 chrZ 16394350 16394435 (CATTATT)n 306 + 16394350 16394435 0 2 49,10, 0,75, +,+, 760430 Simple_repeat Simple_repeat 710 chrZ 16451896 16452363 Char12Mar1_GG 431 - 16451896 16452363 0 2 204,100, 0,367, -,-, 760471 DNA hAT-Charlie 710 chrZ 16482309 16482761 (GAAA)n 884 + 16482309 16482761 0 2 178,257, 0,195, +,+, 760495 Simple_repeat Simple_repeat 711 chrZ 16622437 16622875 CR1-C4 554 - 16622437 16622875 0 2 359,79, 0,359, -,-, 760569 LINE CR1 712 chrZ 16731909 16732629 GGLTR3E3 665 + 16731909 16732629 0 4 123,434,131,32, 0,123,557,688, +,+,+,+, 760643 LTR ERVL 712 chrZ 16734896 16737359 CR1-C4 419 + 16734896 16737359 0 3 729,891,795, 0,748,1668, +,+,+, 760646 LINE CR1 713 chrZ 16876103 16876511 GGLTR3C2 576 + 16876103 16876511 0 2 83,325, 0,83, +,+, 760707 LTR ERVL 713 chrZ 16895229 16895291 (TATTTAC)n 412 + 16895229 16895291 0 2 16,6, 0,56, +,+, 760719 Simple_repeat Simple_repeat 714 chrZ 16943103 16948845 GGERVL18-int 619 + 16943103 16948845 0 4 328,1065,3996,344, 0,336,1402,5398, +,+,+,+, 760747 LTR ERVL 714 chrZ 16961972 16966139 CR1-Y 630 - 16961972 16966139 0 2 2127,1624, 0,2543, -,-, 760753 LINE CR1 714 chrZ 16969440 16969803 CR1-C4 566 + 16969440 16969803 0 2 275,88, 0,275, +,+, 760757 LINE CR1 714 chrZ 16970206 16971962 GGLTR5A 409 + 16970206 16971962 0 3 90,257,134, 0,1347,1622, +,+,+, 760758 LTR ERVL 714 chrZ 16970299 16971557 CR1-E 649 - 16970299 16971557 0 2 549,707, 0,551, -,-, 760759 LINE CR1 714 chrZ 16984778 16985128 CR1-Y1_Aves 427 - 16984778 16985128 0 2 196,154, 0,196, -,-, 760769 LINE CR1 714 chrZ 17000711 17001935 CR1-X2 604 - 17000711 17001935 0 2 53,445, 0,779, -,-, 760785 LINE CR1 714 chrZ 17020145 17022175 CR1-D 601 - 17020145 17022175 0 2 1374,122, 0,1908, -,-, 760794 LINE CR1 89 chrZ 17036180 17039659 Char12Mar1_GG 530 - 17036180 17039659 0 2 65,530, 0,2949, -,-, 760802 DNA hAT-Charlie 714 chrZ 17036309 17039131 CR1-F 544 + 17036309 17039131 0 2 1415,1405, 0,1417, +,+, 760804 LINE CR1 715 chrZ 17123023 17123109 (T)n 1000 + 17123023 17123109 0 2 27,26, 0,60, +,+, 760858 Simple_repeat Simple_repeat 715 chrZ 17146543 17151354 Mariner1b_GG 618 - 17146543 17151354 0 2 286,135, 0,4676, -,-, 760873 DNA TcMar-Mariner 716 chrZ 17188218 17190318 CR1-D 717 - 17188218 17190318 0 2 757,582, 0,1518, -,-, 760897 LINE CR1 716 chrZ 17204160 17204272 AmnSINE1 332 - 17204160 17204272 0 2 34,50, 0,62, -,-, 760906 SINE 5S-Deu-L2 716 chrZ 17214934 17215954 hAT6-N1_Croc 282 - 17214934 17215954 0 2 119,67, 0,953, -,-, 760909 DNA hAT-hAT6 716 chrZ 17249878 17251859 CR1-Y4 484 + 17249878 17251859 0 2 303,924, 0,1057, +,+, 760932 LINE CR1 716 chrZ 17260706 17261223 CR1-F2 470 - 17260706 17261223 0 2 195,320, 0,197, -,-, 760940 LINE CR1 717 chrZ 17308599 17309533 CR1-Y2_Aves 438 + 17308599 17309533 0 3 693,64,160, 0,701,774, +,+,+, 760983 LINE CR1 717 chrZ 17350117 17351038 CR1-F2 609 + 17350117 17351038 0 2 92,829, 0,92, +,+, 761007 LINE CR1 717 chrZ 17374435 17374952 CR1-C 651 - 17374435 17374952 0 2 460,57, 0,460, -,-, 761021 LINE CR1 717 chrZ 17380888 17385038 CR1-D2 525 - 17380888 17385038 0 2 1140,1747, 0,2403, -,-, 761026 LINE CR1 717 chrZ 17382049 17383274 CR1-H 760 + 17382049 17383274 0 2 402,823, 0,402, +,+, 761027 LINE CR1 718 chrZ 17471232 17472784 GGLTR5B 226 - 17471232 17472784 0 2 106,293, 0,1259, -,-, 761070 LTR ERVL 718 chrZ 17503046 17504990 CR1-C2 582 - 17503046 17504990 0 2 488,121, 0,1823, -,-, 761088 LINE CR1 718 chrZ 17510774 17515400 GGERVK10-int 856 - 17510774 17515400 0 2 358,4268, 0,358, -,-, 761096 LTR ERVK 718 chrZ 17527459 17528587 CR1-Y2_Aves 302 + 17527459 17528587 0 2 786,318, 0,810, +,+, 761106 LINE CR1 718 chrZ 17550359 17552848 Char12Mar1_GG 572 - 17550359 17552848 0 2 363,1003, 0,1486, -,-, 761121 DNA hAT-Charlie 718 chrZ 17550724 17551846 CR1-Y2 695 - 17550724 17551846 0 2 759,355, 0,767, -,-, 761122 LINE CR1 718 chrZ 17559555 17560619 CR1-Y4 663 + 17559555 17560619 0 2 132,421, 0,643, +,+, 761125 LINE CR1 719 chrZ 17616135 17617459 CR1-E 456 + 17616135 17617459 0 2 366,906, 0,418, +,+, 761166 LINE CR1 719 chrZ 17650280 17651638 GGLTR5B 606 + 17650280 17651638 0 2 354,148, 0,1210, +,+, 761183 LTR ERVL 719 chrZ 17651911 17652265 CR1-Y1_Aves 411 - 17651911 17652265 0 2 111,226, 0,128, -,-, 761187 LINE CR1 720 chrZ 17800518 17801137 CR1-Y3 698 + 17800518 17801137 0 2 116,503, 0,116, +,+, 761295 LINE CR1 720 chrZ 17822789 17824148 CR1-C4 272 + 17822789 17824148 0 2 334,291, 0,1068, +,+, 761306 LINE CR1 11 chrZ 17824147 17829216 CR1-D2 542 + 17824147 17829216 0 2 473,186, 0,4883, +,+, 761309 LINE CR1 721 chrZ 17850987 17851620 Mariner1_GG 643 - 17850987 17851620 0 2 241,192, 0,441, -,-, 761328 DNA TcMar-Mariner 721 chrZ 17940632 17942641 CR1-B 903 - 17940632 17942641 0 2 1099,394, 0,1615, -,-, 761399 LINE CR1 721 chrZ 17942977 17943552 CR1-C2 610 + 17942977 17943552 0 2 241,334, 0,241, +,+, 761402 LINE CR1 90 chrZ 17953081 17960657 Chompy-6_Croc 120 - 17953081 17960657 0 2 203,154, 0,7422, -,-, 761412 DNA PIF-Harbinger 722 chrZ 17961999 17965457 CR1-D 448 - 17961999 17965457 0 2 3241,122, 0,3336, -,-, 761414 LINE CR1 722 chrZ 17977919 17978469 GGLTR8B 339 + 17977919 17978469 0 2 243,142, 0,408, +,+, 761431 LTR ERVL 722 chrZ 18006397 18007213 CR1-C 824 + 18006397 18007213 0 2 764,18, 0,798, +,+, 761450 LINE CR1 722 chrZ 18059461 18061947 GGLTR5A 323 + 18059461 18061947 0 2 435,169, 0,2317, +,+, 761488 LTR ERVL 723 chrZ 18103508 18103555 (TTTCTT)n 520 + 18103508 18103555 0 2 11,10, 0,37, +,+, 761517 Simple_repeat Simple_repeat 723 chrZ 18136194 18137870 CR1-C4 534 + 18136194 18137870 0 3 413,425,400, 0,851,1276, +,+,+, 761543 LINE CR1 723 chrZ 18170207 18170730 CR1-Y4 521 - 18170207 18170730 0 2 84,439, 0,84, -,-, 761567 LINE CR1 723 chrZ 18188372 18189968 CR1-E 645 - 18188372 18189968 0 2 1361,235, 0,1361, -,-, 761578 LINE CR1 723 chrZ 18200716 18200794 (ATTT)n 316 + 18200716 18200794 0 2 19,25, 0,53, +,+, 761588 Simple_repeat Simple_repeat 724 chrZ 18227860 18231447 GGLTR8B 495 + 18227860 18231447 0 3 409,398,90, 0,2167,3497, +,+,+, 761609 LTR ERVL 724 chrZ 18241905 18244026 CR1-D2 546 + 18241905 18244026 0 2 1907,214, 0,1907, +,+, 761621 LINE CR1 725 chrZ 18365097 18367306 CR1-E 439 + 18365097 18367306 0 2 545,576, 0,1633, +,+, 761707 LINE CR1 725 chrZ 18365996 18366715 CR1-X2 262 + 18365996 18366715 0 2 288,316, 0,403, +,+, 761709 LINE CR1 725 chrZ 18385952 18387076 CR1-D 694 - 18385952 18387076 0 3 540,69,170, 0,664,954, -,-,-, 761718 LINE CR1 725 chrZ 18426473 18426970 Char12Mar1_GG 513 - 18426473 18426970 0 2 290,180, 0,317, -,-, 761747 DNA hAT-Charlie 725 chrZ 18428206 18429489 CR1-X 483 + 18428206 18429489 0 3 413,244,578, 0,447,705, +,+,+, 761751 LINE CR1 725 chrZ 18440057 18440725 CR1-D2 655 - 18440057 18440725 0 2 585,83, 0,585, -,-, 761764 LINE CR1 725 chrZ 18443702 18444122 CR1-X 376 + 18443702 18444122 0 2 85,322, 0,98, +,+, 761768 LINE CR1 725 chrZ 18468441 18469243 CR1-C4 415 + 18468441 18469243 0 2 357,445, 0,357, +,+, 761792 LINE CR1 726 chrZ 18484588 18484711 CR1-X2 590 - 18484588 18484711 0 2 49,74, 0,49, -,-, 761809 LINE CR1 726 chrZ 18513834 18515875 CR1-D2 612 + 18513834 18515875 0 2 266,1130, 0,911, +,+, 761831 LINE CR1 726 chrZ 18529005 18529734 CR1-X 424 - 18529005 18529734 0 2 427,299, 0,430, -,-, 761849 LINE CR1 726 chrZ 18531874 18533078 CR1-C4 579 + 18531874 18533078 0 3 135,514,232, 0,135,972, +,+,+, 761855 LINE CR1 726 chrZ 18533159 18534284 CR1-F2 479 - 18533159 18534284 0 2 1045,80, 0,1045, -,-, 761858 LINE CR1 726 chrZ 18534836 18536699 GGERVL-A-int 198 - 18534836 18536699 0 4 421,244,499,209, 0,535,901,1654, -,-,-,-, 761860 LTR ERVL 726 chrZ 18555682 18565620 CR1-Y1_Aves 389 + 18555682 18565620 0 3 173,288,149, 0,7822,9789, +,+,+, 761877 LINE CR1 726 chrZ 18555836 18557177 CR1-C4 505 + 18555836 18557177 0 2 597,226, 0,1115, +,+, 761878 LINE CR1 726 chrZ 18597976 18600113 CR1-C4 496 + 18597976 18600113 0 2 1432,699, 0,1438, +,+, 761915 LINE CR1 726 chrZ 18607700 18608885 CR1-C2 709 - 18607700 18608885 0 2 812,373, 0,812, -,-, 761924 LINE CR1 727 chrZ 18636505 18637350 CR1-Y1_Aves 159 - 18636505 18637350 0 2 141,397, 0,448, -,-, 761943 LINE CR1 727 chrZ 18638696 18639866 CR1-F2 860 - 18638696 18639866 0 2 49,476, 0,694, -,-, 761946 LINE CR1 727 chrZ 18671176 18671782 REP131 193 - 18671176 18671782 0 2 315,124, 0,482, -,-, 761973 DNA? DNA? 727 chrZ 18709803 18710374 CR1-C2 748 - 18709803 18710374 0 2 111,451, 0,120, -,-, 761994 LINE CR1 728 chrZ 18791653 18792356 CR1-X2 297 + 18791653 18792356 0 2 566,137, 0,566, +,+, 762043 LINE CR1 728 chrZ 18795468 18797535 CR1-F2 587 + 18795468 18797535 0 2 1052,1015, 0,1052, +,+, 762047 LINE CR1 728 chrZ 18801945 18803308 CR1-Y1_Aves 292 - 18801945 18803308 0 2 1231,132, 0,1231, -,-, 762052 LINE CR1 728 chrZ 18806896 18810441 CR1-E 717 - 18806896 18810441 0 2 2315,1230, 0,2315, -,-, 762058 LINE CR1 728 chrZ 18863143 18863925 GGLTR8B 437 - 18863143 18863925 0 2 207,540, 0,242, -,-, 762103 LTR ERVL 728 chrZ 18869071 18871198 CR1-D2 503 + 18869071 18871198 0 2 1374,753, 0,1374, +,+, 762106 LINE CR1 729 chrZ 18915761 18916190 GGLTR5A 569 - 18915761 18916190 0 2 332,94, 0,335, -,-, 762127 LTR ERVL 729 chrZ 18947011 18949964 CR1-C4 539 - 18947011 18949964 0 3 1416,824,174, 0,1685,2779, -,-,-, 762150 LINE CR1 729 chrZ 18959332 18959767 CR1-F2 399 + 18959332 18959767 0 2 145,286, 0,149, +,+, 762161 LINE CR1 729 chrZ 18981653 18983921 CR1-F2 383 + 18981653 18983921 0 2 31,310, 0,1958, +,+, 762178 LINE CR1 729 chrZ 18992149 18993087 CR1-X2 370 - 18992149 18993087 0 2 199,739, 0,199, -,-, 762184 LINE CR1 730 chrZ 19024558 19028747 CR1-Y 342 + 19024558 19028747 0 2 2705,1441, 0,2748, +,+, 762208 LINE CR1 730 chrZ 19033645 19034017 CR1-F2 619 - 19033645 19034017 0 2 74,289, 0,83, -,-, 762213 LINE CR1 731 chrZ 19200023 19200171 GGLTR5A 521 - 19200023 19200171 0 2 91,57, 0,91, -,-, 762303 LTR ERVL 731 chrZ 19248433 19249023 CR1-11_Crp 236 - 19248433 19249023 0 2 210,176, 0,414, -,-, 762336 LINE CR1 731 chrZ 19251580 19252672 CR1-11_Crp 291 - 19251580 19252672 0 2 275,212, 0,880, -,-, 762340 LINE CR1 731 chrZ 19260911 19265638 CR1-X2 476 - 19260911 19265638 0 2 212,248, 0,4479, -,-, 762347 LINE CR1 732 chrZ 19306851 19308035 CR1-E 738 + 19306851 19308035 0 2 678,194, 0,990, +,+, 762378 LINE CR1 732 chrZ 19329908 19330482 CR1-Y1_Aves 98 - 19329908 19330482 0 2 268,246, 0,328, -,-, 762389 LINE CR1 732 chrZ 19374600 19374648 (TTT)n 358 + 19374600 19374648 0 2 7,6, 0,42, +,+, 762415 Simple_repeat Simple_repeat 732 chrZ 19376041 19376524 CR1-L3B_Croc 239 - 19376041 19376524 0 2 212,141, 0,342, -,-, 762418 LINE CR1 732 chrZ 19382149 19382373 CR1-X1 480 - 19382149 19382373 0 2 109,115, 0,109, -,-, 762423 LINE CR1 733 chrZ 19446009 19451833 GGLTR3B1 736 - 19446009 19451833 0 3 501,4814,509, 0,501,5315, -,-,-, 762453 LTR ERVL 733 chrZ 19479568 19480465 CR1-C4 501 - 19479568 19480465 0 3 482,67,320, 0,510,577, -,-,-, 762467 LINE CR1 733 chrZ 19490648 19492633 CR1-E 666 + 19490648 19492633 0 2 1106,274, 0,1711, +,+, 762473 LINE CR1 733 chrZ 19507416 19508843 Char12Mar1_GG 512 - 19507416 19508843 0 2 1092,300, 0,1127, -,-, 762480 DNA hAT-Charlie 734 chrZ 19586574 19588174 CR1-F2 535 - 19586574 19588174 0 2 385,740, 0,860, -,-, 762526 LINE CR1 735 chrZ 19672110 19673861 CR1-C4 593 + 19672110 19673861 0 2 1533,212, 0,1539, +,+, 762598 LINE CR1 735 chrZ 19686219 19687580 CR1-F2 628 + 19686219 19687580 0 2 164,1186, 0,175, +,+, 762602 LINE CR1 735 chrZ 19692242 19692635 GGLTR8B 468 + 19692242 19692635 0 2 209,174, 0,219, +,+, 762607 LTR ERVL 735 chrZ 19714608 19715053 CR1-D2 655 + 19714608 19715053 0 2 156,155, 0,290, +,+, 762625 LINE CR1 735 chrZ 19742525 19742829 Char12Mar1_GG 653 - 19742525 19742829 0 2 86,175, 0,129, -,-, 762647 DNA hAT-Charlie 735 chrZ 19762144 19762427 CR1-E 346 - 19762144 19762427 0 2 17,196, 0,87, -,-, 762664 LINE CR1 735 chrZ 19783044 19784778 CR1-D2 689 + 19783044 19784778 0 2 272,630, 0,1104, +,+, 762685 LINE CR1 736 chrZ 19817236 19819714 CR1-C4 536 - 19817236 19819714 0 2 1469,647, 0,1831, -,-, 762711 LINE CR1 736 chrZ 19824329 19825268 GGLTR5A 404 + 19824329 19825268 0 2 468,105, 0,834, +,+, 762715 LTR ERVL 736 chrZ 19825616 19825905 Char12Mar1_GG 582 - 19825616 19825905 0 2 232,57, 0,232, -,-, 762718 DNA hAT-Charlie 736 chrZ 19861083 19862168 CR1-D2 592 + 19861083 19862168 0 2 710,372, 0,713, +,+, 762740 LINE CR1 736 chrZ 19894582 19895660 ENS1B-LTR 665 - 19894582 19895660 0 2 415,342, 0,736, -,-, 762766 LTR ERVL 736 chrZ 19903019 19906290 CR1-F2 516 - 19903019 19906290 0 5 323,745,132,973,369, 0,914,1797,1929,2902, -,-,-,-,-, 762771 LINE CR1 736 chrZ 19903337 19903947 CR1-C2 713 + 19903337 19903947 0 2 172,438, 0,172, +,+, 762772 LINE CR1 737 chrZ 19931639 19932384 CR1-C3 750 - 19931639 19932384 0 2 117,628, 0,117, -,-, 762803 LINE CR1 737 chrZ 19953164 19955787 CR1-C4 565 - 19953164 19955787 0 2 65,1044, 0,1579, -,-, 762815 LINE CR1 737 chrZ 19978100 19979107 Char12Mar1_GG 562 - 19978100 19979107 0 2 445,98, 0,909, -,-, 762839 DNA hAT-Charlie 737 chrZ 19978542 19979008 CR1-Y4 614 - 19978542 19979008 0 2 298,162, 0,304, -,-, 762840 LINE CR1 737 chrZ 20018397 20019869 CR1-X2 343 + 20018397 20019869 0 2 194,430, 0,1042, +,+, 762864 LINE CR1 737 chrZ 20018588 20019442 CR1-Y2 693 + 20018588 20019442 0 2 475,358, 0,496, +,+, 762865 LINE CR1 737 chrZ 20050869 20051828 CR1-Y1_Aves 411 - 20050869 20051828 0 2 152,671, 0,288, -,-, 762887 LINE CR1 738 chrZ 20102523 20105160 CR1-D2 587 - 20102523 20105160 0 4 406,938,246,1038, 0,406,1353,1599, -,-,-,-, 762923 LINE CR1 738 chrZ 20109541 20109928 GGLTR5B 256 - 20109541 20109928 0 2 152,35, 0,352, -,-, 762929 LTR ERVL 738 chrZ 20141108 20142070 CR1-D2 804 + 20141108 20142070 0 2 37,330, 0,632, +,+, 762952 LINE CR1 739 chrZ 20201608 20202353 CR1-E 660 + 20201608 20202353 0 2 244,297, 0,448, +,+, 762998 LINE CR1 739 chrZ 20235665 20236472 Mariner1_GG 524 - 20235665 20236472 0 2 55,752, 0,55, -,-, 763028 DNA TcMar-Mariner 739 chrZ 20309102 20310664 CR1-D 708 - 20309102 20310664 0 2 193,846, 0,716, -,-, 763074 LINE CR1 740 chrZ 20350896 20352031 CR1-D 684 + 20350896 20352031 0 2 588,547, 0,588, +,+, 763096 LINE CR1 740 chrZ 20358931 20359270 GGLTR3C1 585 + 20358931 20359270 0 2 98,241, 0,98, +,+, 763099 LTR ERVL 740 chrZ 20395165 20395687 CR1-Y2 782 - 20395165 20395687 0 2 433,89, 0,433, -,-, 763131 LINE CR1 740 chrZ 20409265 20409832 CR1-Y1_Aves 363 + 20409265 20409832 0 2 409,158, 0,409, +,+, 763141 LINE CR1 740 chrZ 20444463 20444774 CR1-Y2 767 + 20444463 20444774 0 2 101,126, 0,185, +,+, 763165 LINE CR1 741 chrZ 20455839 20457417 CR1-X 316 - 20455839 20457417 0 2 1236,324, 0,1254, -,-, 763173 LINE CR1 741 chrZ 20473453 20473764 CR1-C 736 + 20473453 20473764 0 2 173,138, 0,173, +,+, 763184 LINE CR1 741 chrZ 20476961 20477885 CR1-X 495 - 20476961 20477885 0 2 856,67, 0,857, -,-, 763185 LINE CR1 741 chrZ 20491175 20491482 CR1-F2 563 - 20491175 20491482 0 2 265,42, 0,265, -,-, 763197 LINE CR1 741 chrZ 20497503 20499614 CR1-Y3 274 + 20497503 20499614 0 3 177,321,181, 0,1289,1930, +,+,+, 763200 LINE CR1 741 chrZ 20538430 20539544 Char12Mar1_GG 494 - 20538430 20539544 0 2 955,145, 0,969, -,-, 763228 DNA hAT-Charlie 741 chrZ 20559214 20560419 CR1-C4 336 - 20559214 20560419 0 2 544,132, 0,1073, -,-, 763245 LINE CR1 742 chrZ 20697032 20699306 CR1-L3B_Croc 116 + 20697032 20699306 0 4 282,462,264,380, 0,479,977,1894, +,+,+,+, 763317 LINE CR1 743 chrZ 20735494 20736109 Charlie12_GGa 495 - 20735494 20736109 0 2 354,261, 0,354, -,-, 763342 DNA hAT-Charlie 743 chrZ 20737500 20738362 CR1-E 805 + 20737500 20738362 0 2 131,731, 0,131, +,+, 763343 LINE CR1 743 chrZ 20745856 20746108 CR1-Y1_Aves 360 - 20745856 20746108 0 2 163,89, 0,163, -,-, 763347 LINE CR1 743 chrZ 20759665 20761794 CR1-C2 729 + 20759665 20761794 0 3 716,697,716, 0,716,1413, +,+,+, 763356 LINE CR1 743 chrZ 20821937 20823116 CR1-X2 503 + 20821937 20823116 0 2 512,667, 0,512, +,+, 763383 LINE CR1 744 chrZ 20854825 20855811 GGERVL-B-int 50 - 20854825 20855811 0 2 418,441, 0,545, -,-, 763404 LTR ERVL 744 chrZ 20864876 20864975 (TTTTA)n 520 + 20864876 20864975 0 2 27,20, 0,79, +,+, 763413 Simple_repeat Simple_repeat 744 chrZ 20903147 20903763 GGLTR5B 343 - 20903147 20903763 0 2 140,169, 0,447, -,-, 763441 LTR ERVL 745 chrZ 21002217 21002285 (CAACC)n 322 + 21002217 21002285 0 2 8,38, 0,30, +,+, 763521 Simple_repeat Simple_repeat 745 chrZ 21022176 21023247 GGLTR8B 219 + 21022176 21023247 0 2 372,75, 0,996, +,+, 763533 LTR ERVL 745 chrZ 21033716 21035088 CR1-C4 462 - 21033716 21035088 0 3 805,375,192, 0,805,1180, -,-,-, 763540 LINE CR1 745 chrZ 21039954 21040681 GGLTR8A 621 - 21039954 21040681 0 2 641,53, 0,674, -,-, 763543 LTR ERVL 745 chrZ 21065814 21066024 GGERV22_LTR 586 - 21065814 21066024 0 2 120,89, 0,121, -,-, 763557 LTR ERVL 746 chrZ 21112694 21112768 (TTTGTT)n 430 + 21112694 21112768 0 2 6,7, 0,67, +,+, 763573 Simple_repeat Simple_repeat 746 chrZ 21131249 21131911 CR1-D 617 - 21131249 21131911 0 3 56,105,496, 0,56,166, -,-,-, 763585 LINE CR1 746 chrZ 21159453 21159754 Char12Mar1_GG 646 - 21159453 21159754 0 2 204,87, 0,214, -,-, 763602 DNA hAT-Charlie 746 chrZ 21188511 21188830 GGLTR8B 508 - 21188511 21188830 0 2 197,122, 0,197, -,-, 763621 LTR ERVL 746 chrZ 21191465 21192107 CR1-C4 447 + 21191465 21192107 0 2 265,356, 0,286, +,+, 763628 LINE CR1 746 chrZ 21204259 21204484 AmnSINE1 285 - 21204259 21204484 0 2 137,62, 0,163, -,-, 763634 SINE 5S-Deu-L2 747 chrZ 21253071 21253934 GGLTR8B 413 + 21253071 21253934 0 3 86,214,206, 0,441,657, +,+,+, 763661 LTR ERVL 747 chrZ 21302435 21303658 CR1-G 727 - 21302435 21303658 0 2 312,910, 0,313, -,-, 763685 LINE CR1 747 chrZ 21360693 21362078 CR1-D2 633 - 21360693 21362078 0 2 217,608, 0,777, -,-, 763713 LINE CR1 748 chrZ 21434284 21434801 CR1-Y1_Aves 532 + 21434284 21434801 0 2 339,78, 0,439, +,+, 763747 LINE CR1 749 chrZ 21516183 21519572 CR1-C4 489 + 21516183 21519572 0 2 93,597, 0,2792, +,+, 763786 LINE CR1 749 chrZ 21579304 21580013 CR1-D2 692 - 21579304 21580013 0 2 191,514, 0,195, -,-, 763819 LINE CR1 750 chrZ 21683298 21683911 GGLTR3A 578 + 21683298 21683911 0 2 443,108, 0,505, +,+, 763869 LTR ERVL 750 chrZ 21692711 21693172 Char12Mar1_GG 539 - 21692711 21693172 0 2 129,288, 0,173, -,-, 763876 DNA hAT-Charlie 750 chrZ 21707968 21709708 CR1-D 426 - 21707968 21709708 0 2 1317,402, 0,1338, -,-, 763888 LINE CR1 750 chrZ 21711674 21712907 CR1-C2 702 - 21711674 21712907 0 2 990,237, 0,996, -,-, 763890 LINE CR1 751 chrZ 21825260 21826122 CR1-F2 518 + 21825260 21826122 0 2 188,674, 0,188, +,+, 763952 LINE CR1 751 chrZ 21828469 21830107 CR1-C4 689 - 21828469 21830107 0 2 513,586, 0,1052, -,-, 763954 LINE CR1 751 chrZ 21839575 21840623 CR1-C 783 + 21839575 21840623 0 2 816,232, 0,816, +,+, 763958 LINE CR1 752 chrZ 21904395 21904724 TguLTR5e 470 - 21904395 21904724 0 2 113,82, 0,247, -,-, 763989 LTR ERVL 752 chrZ 21912886 21913450 CR1-F 574 - 21912886 21913450 0 2 409,155, 0,409, -,-, 763997 LINE CR1 752 chrZ 21951233 21953983 Mariner1_GG 599 - 21951233 21953983 0 2 998,48, 0,2702, -,-, 764016 DNA TcMar-Mariner 752 chrZ 21952233 21953961 CR1-E 755 - 21952233 21953961 0 2 292,1158, 0,570, -,-, 764017 LINE CR1 752 chrZ 21953980 21955542 CR1-C4 608 + 21953980 21955542 0 2 955,594, 0,968, +,+, 764018 LINE CR1 752 chrZ 21966122 21966308 CR1-D2 729 - 21966122 21966308 0 2 93,93, 0,93, -,-, 764026 LINE CR1 753 chrZ 22034581 22034934 CR1-H 817 + 22034581 22034934 0 2 107,246, 0,107, +,+, 764061 LINE CR1 753 chrZ 22038374 22040212 Charlie12_GG 448 - 22038374 22040212 0 3 453,1230,94, 0,493,1744, -,-,-, 764062 DNA hAT-Charlie 753 chrZ 22116599 22117098 CR1-Y1_Aves 393 + 22116599 22117098 0 2 325,172, 0,327, +,+, 764102 LINE CR1 753 chrZ 22135541 22136421 Mariner1_GG 595 - 22135541 22136421 0 2 417,463, 0,417, -,-, 764116 DNA TcMar-Mariner 754 chrZ 22225817 22227392 CR1-X 520 + 22225817 22227392 0 2 567,436, 0,1139, +,+, 764164 LINE CR1 754 chrZ 22230068 22231518 GGLTR8A 242 + 22230068 22231518 0 2 456,231, 0,1219, +,+, 764172 LTR ERVL 754 chrZ 22272604 22274773 CR1-C4 618 + 22272604 22274773 0 2 559,998, 0,1171, +,+, 764196 LINE CR1 755 chrZ 22358123 22359563 CR1-C4 566 + 22358123 22359563 0 2 771,669, 0,771, +,+, 764241 LINE CR1 755 chrZ 22374091 22375863 CR1-D2 613 - 22374091 22375863 0 4 545,596,209,59, 0,816,1416,1713, -,-,-,-, 764251 LINE CR1 756 chrZ 22494566 22495257 CR1-C4 553 - 22494566 22495257 0 2 43,646, 0,45, -,-, 764327 LINE CR1 756 chrZ 22536735 22537451 GGERVL-A-int 383 + 22536735 22537451 0 3 212,187,226, 0,269,490, +,+,+, 764361 LTR ERVL 756 chrZ 22537442 22537972 GGERVL-B-int 552 + 22537442 22537972 0 2 481,36, 0,494, +,+, 764362 LTR ERVL 757 chrZ 22546308 22548137 Char12Mar1_GG 568 - 22546308 22548137 0 2 1069,71, 0,1758, -,-, 764368 DNA hAT-Charlie 757 chrZ 22560523 22561205 CR1-Y4 582 + 22560523 22561205 0 2 384,245, 0,437, +,+, 764376 LINE CR1 758 chrZ 22727672 22727952 Char12Mar1_GG 628 - 22727672 22727952 0 2 167,113, 0,167, -,-, 764475 DNA hAT-Charlie 758 chrZ 22745591 22745954 GGLTR5B 610 - 22745591 22745954 0 2 174,188, 0,175, -,-, 764483 LTR ERVL 758 chrZ 22748186 22748708 TguLTR5e 355 - 22748186 22748708 0 2 92,276, 0,246, -,-, 764485 LTR ERVL 758 chrZ 22770777 22771468 CR1-Y1_Aves 516 - 22770777 22771468 0 2 44,634, 0,57, -,-, 764502 LINE CR1 758 chrZ 22783474 22783732 Char12Mar1_GG 726 - 22783474 22783732 0 2 124,134, 0,124, -,-, 764510 DNA hAT-Charlie 758 chrZ 22793122 22794770 CR1-Y1_Aves 397 - 22793122 22794770 0 3 513,176,294, 0,1178,1354, -,-,-, 764521 LINE CR1 758 chrZ 22797953 22798369 GGLTR12C 636 - 22797953 22798369 0 2 211,202, 0,214, -,-, 764529 LTR ERVL 759 chrZ 22819725 22821599 CR1-D 644 + 22819725 22821599 0 2 207,851, 0,1023, +,+, 764547 LINE CR1 759 chrZ 22823320 22824346 CR1-D 485 + 22823320 22824346 0 2 419,607, 0,419, +,+, 764549 LINE CR1 759 chrZ 22840893 22841996 Mariner1_GG 536 - 22840893 22841996 0 2 184,918, 0,185, -,-, 764567 DNA TcMar-Mariner 759 chrZ 22842008 22843012 CR1-C2 789 + 22842008 22843012 0 2 382,622, 0,382, +,+, 764568 LINE CR1 759 chrZ 22851551 22852022 CR1-X2 591 + 22851551 22852022 0 2 414,57, 0,414, +,+, 764579 LINE CR1 759 chrZ 22868133 22869023 CR1-C4 578 - 22868133 22869023 0 2 511,227, 0,663, -,-, 764593 LINE CR1 759 chrZ 22872127 22872599 GGERVL-A-int 207 - 22872127 22872599 0 2 347,124, 0,348, -,-, 764598 LTR ERVL 760 chrZ 23025089 23026009 CR1-F2 418 + 23025089 23026009 0 2 501,419, 0,501, +,+, 764676 LINE CR1 761 chrZ 23109800 23110880 CR1-Y1_Aves 472 - 23109800 23110880 0 2 72,1008, 0,72, -,-, 764749 LINE CR1 762 chrZ 23227446 23229311 CR1-C4 551 - 23227446 23229311 0 2 303,401, 0,1464, -,-, 764829 LINE CR1 762 chrZ 23240034 23240520 CR1-Y1_Aves 454 + 23240034 23240520 0 2 231,174, 0,312, +,+, 764836 LINE CR1 762 chrZ 23272477 23273812 CR1-X2 252 - 23272477 23273812 0 2 157,1178, 0,157, -,-, 764860 LINE CR1 762 chrZ 23293349 23299229 CR1-C4 436 + 23293349 23299229 0 2 92,437, 0,5443, +,+, 764874 LINE CR1 762 chrZ 23308157 23309369 CR1-Y1_Aves 408 - 23308157 23309369 0 2 311,159, 0,1053, -,-, 764883 LINE CR1 763 chrZ 23417832 23419995 CR1-Y 598 + 23417832 23419995 0 2 1817,58, 0,2105, +,+, 764940 LINE CR1 763 chrZ 23457106 23457944 CR1-Y1_Aves 285 + 23457106 23457944 0 2 141,98, 0,740, +,+, 764962 LINE CR1 765 chrZ 23614292 23615958 CR1-Y4 498 - 23614292 23615958 0 2 470,1178, 0,488, -,-, 765025 LINE CR1 765 chrZ 23677822 23679063 CR1-C4 502 - 23677822 23679063 0 2 239,841, 0,400, -,-, 765076 LINE CR1 765 chrZ 23694508 23695661 CR1-C4 581 + 23694508 23695661 0 2 481,672, 0,481, +,+, 765094 LINE CR1 765 chrZ 23712020 23712463 CR1-Y1_Aves 495 + 23712020 23712463 0 2 387,56, 0,387, +,+, 765110 LINE CR1 765 chrZ 23720828 23721232 CR1-Y3 736 - 23720828 23721232 0 2 305,86, 0,318, -,-, 765124 LINE CR1 766 chrZ 23763705 23764194 CR1-X2 517 + 23763705 23764194 0 2 283,206, 0,283, +,+, 765170 LINE CR1 766 chrZ 23773279 23773963 CR1-X2 436 + 23773279 23773963 0 2 225,222, 0,462, +,+, 765177 LINE CR1 767 chrZ 23869802 23870155 CR1-C4 504 - 23869802 23870155 0 2 219,134, 0,219, -,-, 765235 LINE CR1 767 chrZ 23876337 23877034 Mariner1b_GG 613 - 23876337 23877034 0 2 400,149, 0,548, -,-, 765242 DNA TcMar-Mariner 767 chrZ 23921406 23921763 GGLTR8A 329 + 23921406 23921763 0 2 254,82, 0,275, +,+, 765270 LTR ERVL 767 chrZ 23954004 23954455 TguLTR5e 405 - 23954004 23954455 0 2 375,53, 0,398, -,-, 765279 LTR ERVL 767 chrZ 23970325 23971381 CR1-X2 553 - 23970325 23971381 0 3 101,106,830, 0,120,226, -,-,-, 765291 LINE CR1 767 chrZ 23972982 23982524 CR1-E 440 - 23972982 23982524 0 2 89,101, 0,9441, -,-, 765293 LINE CR1 768 chrZ 23989883 23991096 CR1-F2 798 - 23989883 23991096 0 2 92,1120, 0,93, -,-, 765301 LINE CR1 768 chrZ 24027633 24028840 Char12Mar1_GG 534 + 24027633 24028840 0 2 25,1154, 0,53, +,+, 765336 DNA hAT-Charlie 768 chrZ 24037533 24038601 CR1-C4 628 - 24037533 24038601 0 3 65,134,869, 0,65,199, -,-,-, 765346 LINE CR1 768 chrZ 24068415 24068983 CR1-Y4 702 + 24068415 24068983 0 2 84,99, 0,469, +,+, 765358 LINE CR1 769 chrZ 24133889 24134260 CR1-Y1_Aves 411 + 24133889 24134260 0 2 124,241, 0,130, +,+, 765395 LINE CR1 769 chrZ 24149737 24150338 CR1-Y3 380 - 24149737 24150338 0 2 118,420, 0,181, -,-, 765412 LINE CR1 769 chrZ 24177145 24177935 CR1-X2 324 - 24177145 24177935 0 2 418,182, 0,608, -,-, 765428 LINE CR1 769 chrZ 24186782 24187683 CR1-E 400 + 24186782 24187683 0 2 605,248, 0,653, +,+, 765435 LINE CR1 770 chrZ 24347036 24348883 CR1-L3A_Croc 228 + 24347036 24348883 0 2 134,87, 0,1760, +,+, 765529 LINE CR1 771 chrZ 24398332 24398872 CR1-Y2 224 - 24398332 24398872 0 2 24,168, 0,372, -,-, 765569 LINE CR1 771 chrZ 24476515 24478053 CR1-F2 445 + 24476515 24478053 0 3 363,504,645, 0,363,893, +,+,+, 765617 LINE CR1 771 chrZ 24491981 24497802 CR1-C2 617 + 24491981 24497802 0 2 783,99, 0,5722, +,+, 765625 LINE CR1 771 chrZ 24492852 24494333 CR1-Y2 534 + 24492852 24494333 0 2 1139,342, 0,1139, +,+, 765627 LINE CR1 772 chrZ 24598526 24599154 GGERVL-B-int 148 + 24598526 24599154 0 2 108,184, 0,444, +,+, 765687 LTR ERVL 773 chrZ 24653944 24654037 (AT)n 466 + 24653944 24654037 0 2 17,54, 0,39, +,+, 765720 Simple_repeat Simple_repeat 773 chrZ 24675042 24676660 CR1-X1 467 - 24675042 24676660 0 2 707,175, 0,1443, -,-, 765733 LINE CR1 773 chrZ 24705103 24705395 CR1-D 740 - 24705103 24705395 0 2 253,39, 0,253, -,-, 765768 LINE CR1 773 chrZ 24727041 24727412 Char12Mar1_GG 730 - 24727041 24727412 0 2 325,42, 0,329, -,-, 765777 DNA hAT-Charlie 773 chrZ 24751156 24751491 CR1-C4 546 - 24751156 24751491 0 2 271,33, 0,302, -,-, 765788 LINE CR1 774 chrZ 24823130 24823490 CR1-C4 462 + 24823130 24823490 0 2 179,181, 0,179, +,+, 765859 LINE CR1 774 chrZ 24837186 24845998 Char12Mar1_GG 570 - 24837186 24845998 0 2 48,39, 0,8773, -,-, 765875 DNA hAT-Charlie 775 chrZ 24925588 24925905 CR1-X1 671 + 24925588 24925905 0 3 126,34,107, 0,126,210, +,+,+, 765926 LINE CR1 775 chrZ 24937128 24938304 CR1-Y1_Aves 479 - 24937128 24938304 0 3 917,97,68, 0,1011,1108, -,-,-, 765931 LINE CR1 775 chrZ 24948170 24948669 UCON29 508 - 24948170 24948669 0 2 105,55, 0,444, -,-, 765936 DNA Kolobok 775 chrZ 24953152 24953945 CR1-Y2_Aves 271 + 24953152 24953945 0 2 495,227, 0,566, +,+, 765940 LINE CR1 775 chrZ 25019387 25020148 CR1-F2 536 + 25019387 25020148 0 2 430,62, 0,699, +,+, 765977 LINE CR1 776 chrZ 25047482 25050140 CR1-C3 635 - 25047482 25050140 0 3 2253,124,244, 0,2280,2414, -,-,-, 765995 LINE CR1 776 chrZ 25066141 25067515 CR1-Y1_Aves 522 - 25066141 25067515 0 2 71,140, 0,1234, -,-, 766007 LINE CR1 776 chrZ 25120506 25122385 CR1-D2 669 - 25120506 25122385 0 2 163,1716, 0,163, -,-, 766040 LINE CR1 776 chrZ 25130591 25132270 CR1-E 667 - 25130591 25132270 0 3 658,898,113, 0,668,1566, -,-,-, 766049 LINE CR1 776 chrZ 25132404 25132805 CR1-X2 495 + 25132404 25132805 0 2 179,210, 0,191, +,+, 766050 LINE CR1 777 chrZ 25232553 25233180 CR1-Y2_Aves 235 - 25232553 25233180 0 2 287,307, 0,320, -,-, 766109 LINE CR1 777 chrZ 25234717 25234763 (TCT)n 414 + 25234717 25234763 0 2 8,8, 0,38, +,+, 766110 Simple_repeat Simple_repeat 777 chrZ 25243681 25245254 CR1-Y2_Aves 244 - 25243681 25245254 0 3 419,508,610, 0,442,963, -,-,-, 766118 LINE CR1 777 chrZ 25258594 25261642 CR1-F 564 + 25258594 25261642 0 2 1532,1515, 0,1533, +,+, 766122 LINE CR1 777 chrZ 25279097 25282294 CR1-C 804 + 25279097 25282294 0 2 1866,1331, 0,1866, +,+, 766131 LINE CR1 777 chrZ 25287401 25288483 CR1-C3 564 + 25287401 25288483 0 2 1012,70, 0,1012, +,+, 766135 LINE CR1 777 chrZ 25290728 25296798 CR1-C3 751 + 25290728 25296798 0 3 85,249,65, 0,411,6005, +,+,+, 766136 LINE CR1 778 chrZ 25335478 25336025 GGLTR8A 582 + 25335478 25336025 0 2 294,253, 0,294, +,+, 766153 LTR ERVL 778 chrZ 25387436 25388200 CR1-C4 527 + 25387436 25388200 0 2 137,367, 0,397, +,+, 766179 LINE CR1 779 chrZ 25482124 25483820 CR1-C4 589 + 25482124 25483820 0 2 595,1096, 0,600, +,+, 766247 LINE CR1 779 chrZ 25508852 25515532 CR1-D2 660 + 25508852 25515532 0 2 107,591, 0,6089, +,+, 766264 LINE CR1 780 chrZ 25588427 25593078 ENS1-LTR 965 + 25588427 25593078 0 3 913,2821,913, 0,917,3738, +,+,+, 766305 LTR ERVL 780 chrZ 25594756 25595211 CR1-E 752 - 25594756 25595211 0 2 140,315, 0,140, -,-, 766307 LINE CR1 780 chrZ 25597527 25598832 CR1-D 612 - 25597527 25598832 0 2 1155,150, 0,1155, -,-, 766309 LINE CR1 780 chrZ 25605316 25606456 CR1-C2 566 - 25605316 25606456 0 2 75,146, 0,994, -,-, 766318 LINE CR1 780 chrZ 25606479 25607103 CR1-H 384 + 25606479 25607103 0 2 209,379, 0,245, +,+, 766320 LINE CR1 780 chrZ 25608984 25609608 CR1-H 384 + 25608984 25609608 0 2 209,379, 0,245, +,+, 766323 LINE CR1 780 chrZ 25611489 25611858 CR1-H 433 + 25611489 25611858 0 2 209,123, 0,246, +,+, 766326 LINE CR1 780 chrZ 25664472 25665096 CR1-H 378 + 25664472 25665096 0 2 209,379, 0,245, +,+, 766330 LINE CR1 780 chrZ 25671723 25672868 CR1-C2 575 - 25671723 25672868 0 2 75,133, 0,1012, -,-, 766338 LINE CR1 780 chrZ 25672886 25673510 CR1-H 384 + 25672886 25673510 0 2 209,379, 0,245, +,+, 766340 LINE CR1 780 chrZ 25675391 25676015 CR1-H 384 + 25675391 25676015 0 2 209,379, 0,245, +,+, 766343 LINE CR1 780 chrZ 25682661 25683806 CR1-C2 575 - 25682661 25683806 0 2 75,133, 0,1012, -,-, 766351 LINE CR1 780 chrZ 25683824 25684448 CR1-H 384 + 25683824 25684448 0 2 209,379, 0,245, +,+, 766353 LINE CR1 97 chrZ 25687373 25691942 CR1-G 727 + 25687373 25691942 0 2 204,994, 0,3575, +,+, 766356 LINE CR1 97 chrZ 25687577 25690948 GGLTR10D 961 + 25687577 25690948 0 3 346,2679,346, 0,346,3025, +,+,+, 766357 LTR ERVK 781 chrZ 25719758 25728386 CR1-Y1_Aves 559 - 25719758 25728386 0 2 83,1043, 0,7585, -,-, 766374 LINE CR1 782 chrZ 25838671 25839358 CR1-C2 799 - 25838671 25839358 0 2 167,519, 0,168, -,-, 766425 LINE CR1 782 chrZ 25843953 25844583 CR1-C4 101 - 25843953 25844583 0 2 406,217, 0,413, -,-, 766427 LINE CR1 783 chrZ 26055324 26055755 UCON28c 373 + 26055324 26055755 0 2 200,116, 0,315, +,+, 766548 Unknown Unknown 784 chrZ 26125565 26126830 CR1-Y4 485 - 26125565 26126830 0 2 121,511, 0,754, -,-, 766592 LINE CR1 784 chrZ 26184826 26185252 GGLTR5B 312 - 26184826 26185252 0 2 249,121, 0,305, -,-, 766624 LTR ERVL 785 chrZ 26230822 26231386 CR1-X1 624 - 26230822 26231386 0 2 234,324, 0,240, -,-, 766658 LINE CR1 785 chrZ 26260653 26261975 CR1-B2 711 + 26260653 26261975 0 2 209,1108, 0,214, +,+, 766685 LINE CR1 785 chrZ 26269773 26271586 CR1-C4 633 - 26269773 26271586 0 2 652,663, 0,1150, -,-, 766687 LINE CR1 785 chrZ 26306732 26307334 CR1-Y2_Aves 387 + 26306732 26307334 0 2 110,396, 0,206, +,+, 766711 LINE CR1 785 chrZ 26337887 26338308 GGLTR8B 339 - 26337887 26338308 0 2 174,247, 0,174, -,-, 766745 LTR ERVL 786 chrZ 26345613 26346004 Char12Mar1_GG 652 - 26345613 26346004 0 2 215,176, 0,215, -,-, 766752 DNA hAT-Charlie 786 chrZ 26371503 26371953 CR1-E 749 - 26371503 26371953 0 2 294,156, 0,294, -,-, 766774 LINE CR1 786 chrZ 26389468 26389558 (T)n 921 + 26389468 26389558 0 2 27,28, 0,62, +,+, 766793 Simple_repeat Simple_repeat 786 chrZ 26451310 26453228 CR1-Y2_Aves 333 + 26451310 26453228 0 2 438,616, 0,1302, +,+, 766835 LINE CR1 786 chrZ 26457739 26457907 CR1-Y1_Aves 467 - 26457739 26457907 0 2 105,63, 0,105, -,-, 766839 LINE CR1 787 chrZ 26478326 26479880 CR1-C4 410 + 26478326 26479880 0 2 171,109, 0,1445, +,+, 766848 LINE CR1 788 chrZ 26638366 26638520 CR1-X1 622 - 26638366 26638520 0 2 92,46, 0,108, -,-, 766932 LINE CR1 788 chrZ 26661486 26663104 CR1-D2 587 + 26661486 26663104 0 2 911,703, 0,915, +,+, 766952 LINE CR1 788 chrZ 26731127 26731866 GGLTR12C 511 + 26731127 26731866 0 2 120,245, 0,494, +,+, 766996 LTR ERVL 789 chrZ 26759245 26761644 CR1-D 116 - 26759245 26761644 0 2 1173,416, 0,1983, -,-, 767014 LINE CR1 789 chrZ 26764619 26766365 CR1-Y4 548 + 26764619 26766365 0 2 276,587, 0,1159, +,+, 767021 LINE CR1 789 chrZ 26778770 26780803 Char12Mar1_GG 582 - 26778770 26780803 0 2 524,36, 0,1997, -,-, 767036 DNA hAT-Charlie 789 chrZ 26779289 26780767 CR1-F2 562 + 26779289 26780767 0 2 817,661, 0,817, +,+, 767037 LINE CR1 789 chrZ 26782777 26783286 CR1-Y1_Aves 442 - 26782777 26783286 0 2 140,369, 0,140, -,-, 767041 LINE CR1 789 chrZ 26789033 26791696 CR1-C 438 + 26789033 26791696 0 2 1197,1461, 0,1202, +,+, 767046 LINE CR1 789 chrZ 26799718 26800113 CR1-C4 601 + 26799718 26800113 0 2 117,254, 0,141, +,+, 767061 LINE CR1 789 chrZ 26817849 26818734 CR1-Y4 507 + 26817849 26818734 0 2 294,360, 0,525, +,+, 767069 LINE CR1 789 chrZ 26832222 26834340 CR1-C4 549 + 26832222 26834340 0 3 364,1044,67, 0,1007,2051, +,+,+, 767089 LINE CR1 789 chrZ 26837599 26840042 CR1-G 849 + 26837599 26840042 0 2 777,1215, 0,1228, +,+, 767094 LINE CR1 789 chrZ 26850955 26852139 CR1-F2 401 - 26850955 26852139 0 2 524,660, 0,524, -,-, 767107 LINE CR1 790 chrZ 26884853 26885933 CR1-Y1_Aves 378 + 26884853 26885933 0 2 813,241, 0,839, +,+, 767136 LINE CR1 790 chrZ 26895032 26895422 CR1-F2 414 - 26895032 26895422 0 2 119,122, 0,268, -,-, 767144 LINE CR1 790 chrZ 26922125 26924607 CR1-C4 492 - 26922125 26924607 0 2 766,1716, 0,766, -,-, 767164 LINE CR1 790 chrZ 26993652 26994993 CR1-Y3 567 + 26993652 26994993 0 2 940,401, 0,940, +,+, 767203 LINE CR1 790 chrZ 26996045 26996672 CR1-F2 461 - 26996045 26996672 0 2 381,246, 0,381, -,-, 767205 LINE CR1 790 chrZ 26996665 26997364 CR1-F2 357 + 26996665 26997364 0 2 319,144, 0,555, +,+, 767206 LINE CR1 791 chrZ 27019581 27027947 CR1-F 469 - 27019581 27027947 0 3 1362,1756,476, 0,3930,7890, -,-,-, 767227 LINE CR1 791 chrZ 27030477 27032297 CR1-X2 482 + 27030477 27032297 0 3 93,412,458, 0,583,1362, +,+,+, 767235 LINE CR1 791 chrZ 27042595 27043066 CR1-B2 815 + 27042595 27043066 0 2 400,70, 0,401, +,+, 767243 LINE CR1 791 chrZ 27044924 27045621 CR1-D 156 + 27044924 27045621 0 2 387,246, 0,451, +,+, 767245 LINE CR1 791 chrZ 27057378 27059081 CR1-Y4 622 + 27057378 27059081 0 2 498,407, 0,1296, +,+, 767265 LINE CR1 791 chrZ 27072155 27075615 CR1-D2 432 + 27072155 27075615 0 4 1173,29,197,484, 0,1245,2779,2976, +,+,+,+, 767276 LINE CR1 791 chrZ 27080261 27081563 CR1-D2 505 + 27080261 27081563 0 2 442,857, 0,445, +,+, 767281 LINE CR1 791 chrZ 27089670 27099037 CR1-C2 550 + 27089670 27099037 0 4 1765,391,846,59, 0,2068,5164,9308, +,+,+,+, 767287 LINE CR1 792 chrZ 27135545 27137125 CR1-E 725 + 27135545 27137125 0 2 57,1199, 0,381, +,+, 767320 LINE CR1 792 chrZ 27148804 27149244 GGLTR8B 384 + 27148804 27149244 0 2 247,80, 0,360, +,+, 767339 LTR ERVL 792 chrZ 27157159 27157599 GGLTR8B 360 + 27157159 27157599 0 2 247,85, 0,355, +,+, 767354 LTR ERVL 792 chrZ 27168291 27168731 GGLTR8B 383 + 27168291 27168731 0 2 268,80, 0,360, +,+, 767374 LTR ERVL 792 chrZ 27176599 27177082 GGLTR8B 368 + 27176599 27177082 0 2 311,87, 0,396, +,+, 767389 LTR ERVL 792 chrZ 27237409 27237849 GGLTR8B 386 - 27237409 27237849 0 2 85,268, 0,172, -,-, 767426 LTR ERVL 792 chrZ 27240189 27240635 GGLTR8B 413 - 27240189 27240635 0 2 85,274, 0,172, -,-, 767431 LTR ERVL 792 chrZ 27245774 27246214 GGLTR8B 369 - 27245774 27246214 0 2 85,247, 0,193, -,-, 767441 LTR ERVL 792 chrZ 27248555 27248996 GGLTR8B 381 - 27248555 27248996 0 2 85,247, 0,194, -,-, 767446 LTR ERVL 792 chrZ 27250928 27251787 GGLTR8B 206 - 27250928 27251787 0 2 227,247, 0,612, -,-, 767450 LTR ERVL 792 chrZ 27259697 27260180 GGLTR8B 363 - 27259697 27260180 0 2 85,290, 0,193, -,-, 767465 LTR ERVL 792 chrZ 27262485 27262925 GGLTR8B 374 - 27262485 27262925 0 2 85,247, 0,193, -,-, 767470 LTR ERVL 793 chrZ 27265266 27265706 GGLTR8B 386 - 27265266 27265706 0 2 85,268, 0,172, -,-, 767475 LTR ERVL 793 chrZ 27273753 27275457 GGLTR3F1 793 + 27273753 27275457 0 2 494,1209, 0,495, +,+, 767485 LTR ERVL 793 chrZ 27275448 27276850 GGLTR3F1 973 + 27275448 27276850 0 2 908,494, 0,908, +,+, 767486 LTR ERVL 793 chrZ 27293554 27295262 GGLTR3F1 789 + 27293554 27295262 0 2 494,1213, 0,495, +,+, 767496 LTR ERVL 793 chrZ 27295253 27296655 GGLTR3F1 970 + 27295253 27296655 0 2 908,494, 0,908, +,+, 767497 LTR ERVL 793 chrZ 27316031 27317808 CR1-X 273 - 27316031 27317808 0 2 1539,237, 0,1540, -,-, 767515 LINE CR1 793 chrZ 27318107 27318783 GGLTR5A 317 + 27318107 27318783 0 2 353,204, 0,472, +,+, 767518 LTR ERVL 794 chrZ 27405199 27408948 GGERVL18-int 567 + 27405199 27408948 0 4 968,755,1458,289, 0,972,1998,3460, +,+,+,+, 767566 LTR ERVL 794 chrZ 27409317 27412429 CR1-F2 444 + 27409317 27412429 0 2 2727,385, 0,2727, +,+, 767569 LINE CR1 794 chrZ 27419237 27421282 CR1-X 532 - 27419237 27421282 0 2 1927,112, 0,1933, -,-, 767574 LINE CR1 794 chrZ 27421663 27426133 CR1-D 623 - 27421663 27426133 0 6 796,64,17,316,244,829, 0,1937,2769,2821,3372,3641, -,-,-,-,-,-, 767575 LINE CR1 794 chrZ 27422461 27423600 GGLTR3B2 688 - 27422461 27423600 0 2 249,278, 0,861, -,-, 767576 LTR ERVL 794 chrZ 27437137 27437973 GGLTR3C2 508 - 27437137 27437973 0 2 230,327, 0,509, -,-, 767600 LTR ERVL 794 chrZ 27452471 27452707 CR1-F0 613 + 27452471 27452707 0 2 155,75, 0,161, +,+, 767617 LINE CR1 794 chrZ 27463162 27464422 CR1-C4 291 - 27463162 27464422 0 2 289,971, 0,289, -,-, 767621 LINE CR1 794 chrZ 27481210 27481287 (CCCTGCG)n 326 + 27481210 27481287 0 2 17,29, 0,48, +,+, 767637 Simple_repeat Simple_repeat 794 chrZ 27486050 27486792 GGLTR5A 389 + 27486050 27486792 0 2 432,119, 0,623, +,+, 767640 LTR ERVL 794 chrZ 27503494 27503941 CR1-D 694 - 27503494 27503941 0 2 391,54, 0,393, -,-, 767652 LINE CR1 794 chrZ 27504021 27508396 CR1-H2 465 + 27504021 27508396 0 2 119,56, 0,4319, +,+, 767653 LINE CR1 794 chrZ 27517851 27519215 CR1-Y4 570 + 27517851 27519215 0 2 118,456, 0,908, +,+, 767663 LINE CR1 794 chrZ 27520460 27521330 CR1-X2 278 - 27520460 27521330 0 2 529,285, 0,585, -,-, 767665 LINE CR1 795 chrZ 27549223 27550631 CR1-F2 259 + 27549223 27550631 0 3 112,659,124, 0,576,1284, +,+,+, 767679 LINE CR1 795 chrZ 27569433 27570365 CR1-C4 623 + 27569433 27570365 0 2 51,881, 0,51, +,+, 767689 LINE CR1 795 chrZ 27580957 27583231 CR1-X2 512 + 27580957 27583231 0 2 1407,867, 0,1407, +,+, 767696 LINE CR1 795 chrZ 27618813 27618921 (T)n 585 + 27618813 27618921 0 2 40,50, 0,58, +,+, 767717 Simple_repeat Simple_repeat 795 chrZ 27636874 27636951 (AAGTTA)n 408 + 27636874 27636951 0 2 26,26, 0,51, +,+, 767730 Simple_repeat Simple_repeat 796 chrZ 27659954 27660235 CR1-Y3 126 - 27659954 27660235 0 2 178,72, 0,209, -,-, 767753 LINE CR1 796 chrZ 27689709 27690503 CR1-X2 520 - 27689709 27690503 0 2 746,48, 0,746, -,-, 767779 LINE CR1 796 chrZ 27699571 27699940 CR1-C4 569 - 27699571 27699940 0 2 247,122, 0,247, -,-, 767784 LINE CR1 796 chrZ 27711561 27711914 CR1-X1 371 - 27711561 27711914 0 2 222,99, 0,254, -,-, 767793 LINE CR1 796 chrZ 27735678 27736843 CR1-D2 640 + 27735678 27736843 0 2 436,280, 0,885, +,+, 767810 LINE CR1 796 chrZ 27785192 27785534 CR1-C4 450 + 27785192 27785534 0 2 247,95, 0,247, +,+, 767836 LINE CR1 797 chrZ 27863603 27867497 CR1-Y3 364 + 27863603 27867497 0 2 143,112, 0,3782, +,+, 767893 LINE CR1 797 chrZ 27869054 27872028 CR1-Y4 350 + 27869054 27872028 0 2 1372,893, 0,2081, +,+, 767899 LINE CR1 797 chrZ 27882197 27884109 CR1-C4 494 + 27882197 27884109 0 2 1116,629, 0,1283, +,+, 767912 LINE CR1 797 chrZ 27888974 27889484 GGLTR5B 371 + 27888974 27889484 0 3 234,82,94, 0,306,416, +,+,+, 767918 LTR ERVL 797 chrZ 27890470 27892209 GGERVL-A-int 249 + 27890470 27892209 0 3 215,241,230, 0,570,1509, +,+,+, 767920 LTR ERVL 798 chrZ 27939334 27941137 CR1-F 507 + 27939334 27941137 0 2 243,1465, 0,338, +,+, 767957 LINE CR1 798 chrZ 27953648 27954117 GGLTR6 497 - 27953648 27954117 0 2 176,293, 0,176, -,-, 767969 LTR ERVL 798 chrZ 27962555 27963287 CR1-C2 353 + 27962555 27963287 0 2 185,124, 0,608, +,+, 767974 LINE CR1 798 chrZ 27963974 27964900 GGLTR3B2 704 - 27963974 27964900 0 2 413,512, 0,414, -,-, 767976 LTR ERVL 798 chrZ 27986672 27988211 CR1-Y2_Aves 60 + 27986672 27988211 0 3 296,269,578, 0,637,961, +,+,+, 767990 LINE CR1 798 chrZ 27989030 27991116 CR1-Y2_Aves 167 - 27989030 27991116 0 3 402,959,635, 0,402,1451, -,-,-, 767994 LINE CR1 799 chrZ 28100451 28102397 CR1-X2 439 - 28100451 28102397 0 3 80,841,66, 0,1026,1880, -,-,-, 768060 LINE CR1 799 chrZ 28100531 28100901 GGLTR5B 217 + 28100531 28100901 0 2 138,232, 0,138, +,+, 768061 LTR ERVL 799 chrZ 28100935 28101480 GGERVL-B-int 410 - 28100935 28101480 0 2 190,344, 0,201, -,-, 768062 LTR ERVL 799 chrZ 28104687 28106371 CR1-Y2_Aves 197 - 28104687 28106371 0 2 83,147, 0,1537, -,-, 768066 LINE CR1 799 chrZ 28107459 28112849 GGLTR3B1 742 + 28107459 28112849 0 4 510,2847,1530,502, 0,511,3358,4888, +,+,+,+, 768070 LTR ERVL 799 chrZ 28115169 28116317 Mariner1_GG 512 - 28115169 28116317 0 2 753,309, 0,839, -,-, 768073 DNA TcMar-Mariner 799 chrZ 28122298 28122753 CR1-Y2 711 + 28122298 28122753 0 2 389,66, 0,389, +,+, 768079 LINE CR1 799 chrZ 28123906 28125886 GGERVL-B-int 385 - 28123906 28125886 0 2 785,284, 0,1696, -,-, 768081 LTR ERVL 799 chrZ 28126008 28126983 GGERVL-B-int 362 - 28126008 28126983 0 2 218,757, 0,218, -,-, 768086 LTR ERVL 799 chrZ 28127097 28127832 GGERVL-A-int 203 - 28127097 28127832 0 2 145,262, 0,473, -,-, 768087 LTR ERVL 799 chrZ 28150784 28152503 CR1-Y1_Aves 606 + 28150784 28152503 0 2 79,244, 0,1475, +,+, 768100 LINE CR1 799 chrZ 28150854 28152260 Char12Mar1_GG 590 - 28150854 28152260 0 2 346,203, 0,1203, -,-, 768101 DNA hAT-Charlie 800 chrZ 28183170 28185389 CR1-F 483 + 28183170 28185389 0 2 695,1524, 0,695, +,+, 768121 LINE CR1 800 chrZ 28242729 28243186 CR1-D 319 - 28242729 28243186 0 2 30,292, 0,165, -,-, 768164 LINE CR1 800 chrZ 28279707 28280180 GGLTR6 448 + 28279707 28280180 0 2 334,139, 0,334, +,+, 768195 LTR ERVL 800 chrZ 28288226 28289859 CR1-C4 477 - 28288226 28289859 0 2 316,1317, 0,316, -,-, 768203 LINE CR1 801 chrZ 28311604 28314151 CR1-Y4 467 - 28311604 28314151 0 2 1145,1297, 0,1250, -,-, 768230 LINE CR1 801 chrZ 28315270 28316202 CR1-E 216 - 28315270 28316202 0 2 521,201, 0,731, -,-, 768233 LINE CR1 801 chrZ 28317909 28320295 CR1-X1 480 + 28317909 28320295 0 2 473,1174, 0,1212, +,+, 768235 LINE CR1 801 chrZ 28329922 28330142 Char12Mar1_GG 628 - 28329922 28330142 0 2 111,99, 0,121, -,-, 768244 DNA hAT-Charlie 801 chrZ 28355414 28355707 CR1-Y2_Aves 233 + 28355414 28355707 0 2 100,150, 0,143, +,+, 768263 LINE CR1 801 chrZ 28366965 28367458 GGLTR8B 539 - 28366965 28367458 0 2 411,82, 0,411, -,-, 768274 LTR ERVL 801 chrZ 28390108 28390937 CR1-D 697 - 28390108 28390937 0 2 423,406, 0,423, -,-, 768284 LINE CR1 801 chrZ 28430963 28431592 GGLTR8A 579 + 28430963 28431592 0 3 97,266,266, 0,97,363, +,+,+, 768320 LTR ERVL 802 chrZ 28454443 28456668 GGLTR10D-int 911 + 28454443 28456668 0 2 1859,363, 0,1862, +,+, 768335 LTR ERVK 802 chrZ 28461231 28461440 CR1-D2 746 - 28461231 28461440 0 2 109,26, 0,183, -,-, 768339 LINE CR1 802 chrZ 28469967 28471271 CR1-Y1_Aves 390 + 28469967 28471271 0 2 162,313, 0,991, +,+, 768348 LINE CR1 802 chrZ 28471997 28472054 (AACA)n 414 + 28471997 28472054 0 2 16,14, 0,43, +,+, 768351 Simple_repeat Simple_repeat 802 chrZ 28499028 28499839 GGLTR8A 563 + 28499028 28499839 0 3 173,546,77, 0,173,734, +,+,+, 768371 LTR ERVL 802 chrZ 28531359 28534754 CR1-C4 339 + 28531359 28534754 0 4 237,308,610,662, 0,1299,2122,2733, +,+,+,+, 768393 LINE CR1 802 chrZ 28546082 28548685 CR1-Y2_Aves 249 - 28546082 28548685 0 2 309,759, 0,1844, -,-, 768406 LINE CR1 802 chrZ 28546389 28547939 CR1-X2 433 - 28546389 28547939 0 3 154,414,281, 0,805,1269, -,-,-, 768407 LINE CR1 802 chrZ 28546543 28547194 ENS1B-LTR 396 - 28546543 28547194 0 2 497,91, 0,560, -,-, 768408 LTR ERVL 802 chrZ 28548787 28550463 CR1-C3 692 + 28548787 28550463 0 2 877,220, 0,1456, +,+, 768409 LINE CR1 802 chrZ 28549638 28550217 CR1-F 767 - 28549638 28550217 0 2 434,75, 0,504, -,-, 768410 LINE CR1 803 chrZ 28588890 28590086 CR1-Y2_Aves 356 - 28588890 28590086 0 2 412,287, 0,909, -,-, 768443 LINE CR1 803 chrZ 28589612 28589816 CR1-X2 442 - 28589612 28589816 0 2 138,35, 0,169, -,-, 768445 LINE CR1 803 chrZ 28596794 28598459 CR1-B2 552 - 28596794 28598459 0 2 315,1350, 0,315, -,-, 768452 LINE CR1 803 chrZ 28602753 28605157 CR1-Y1_Aves 453 + 28602753 28605157 0 2 419,229, 0,2175, +,+, 768458 LINE CR1 803 chrZ 28603177 28603615 CR1-F2 539 + 28603177 28603615 0 2 75,348, 0,90, +,+, 768459 LINE CR1 803 chrZ 28641392 28641550 (TCT)n 134 + 28641392 28641550 0 2 20,111, 0,47, +,+, 768495 Simple_repeat Simple_repeat 803 chrZ 28678928 28680097 GGLTR10C2 491 - 28678928 28680097 0 2 269,82, 0,1087, -,-, 768528 LTR ERVK 803 chrZ 28700629 28701664 CR1-X2 192 + 28700629 28701664 0 2 994,11, 0,1024, +,+, 768553 LINE CR1 804 chrZ 28713891 28716108 CR1-C4 543 - 28713891 28716108 0 2 242,1467, 0,750, -,-, 768569 LINE CR1 804 chrZ 28716584 28719013 CR1-Y2_Aves 239 - 28716584 28719013 0 4 265,371,312,798, 0,807,1178,1631, -,-,-,-, 768572 LINE CR1 804 chrZ 28719601 28720294 CR1-F2 457 + 28719601 28720294 0 2 243,450, 0,243, +,+, 768575 LINE CR1 804 chrZ 28725807 28727246 CR1-C3 579 + 28725807 28727246 0 2 412,1027, 0,412, +,+, 768585 LINE CR1 804 chrZ 28744030 28744531 CR1-Y2_Aves 503 - 28744030 28744531 0 2 188,176, 0,325, -,-, 768603 LINE CR1 804 chrZ 28746225 28748446 CR1-F 362 - 28746225 28748446 0 2 217,462, 0,1759, -,-, 768606 LINE CR1 804 chrZ 28746442 28747994 CR1-X2 434 - 28746442 28747994 0 2 465,700, 0,852, -,-, 768607 LINE CR1 804 chrZ 28746917 28747290 GGLTR3B3 788 + 28746917 28747290 0 2 180,193, 0,180, +,+, 768608 LTR ERVL 804 chrZ 28758327 28760031 CR1-Y2 744 - 28758327 28760031 0 2 595,216, 0,1488, -,-, 768614 LINE CR1 804 chrZ 28760491 28763006 CR1-X2 339 - 28760491 28763006 0 2 148,1102, 0,1413, -,-, 768617 LINE CR1 804 chrZ 28764478 28764856 GGLTR3D 638 - 28764478 28764856 0 2 287,80, 0,298, -,-, 768620 LTR ERVL 804 chrZ 28766960 28767622 GGLTR11-int 381 + 28766960 28767622 0 2 126,204, 0,458, +,+, 768623 LTR ERV1 805 chrZ 28849548 28851714 CR1-C4 438 + 28849548 28851714 0 2 893,1273, 0,893, +,+, 768698 LINE CR1 805 chrZ 28870679 28870778 (T)n 721 + 28870679 28870778 0 2 27,29, 0,70, +,+, 768720 Simple_repeat Simple_repeat 805 chrZ 28878476 28879234 CR1-F2 437 - 28878476 28879234 0 2 374,379, 0,379, -,-, 768730 LINE CR1 805 chrZ 28883212 28887823 CR1-C4 119 + 28883212 28887823 0 3 689,2951,583, 0,690,4028, +,+,+, 768737 LINE CR1 805 chrZ 28887820 28889484 CR1-H2 167 - 28887820 28889484 0 2 551,1113, 0,551, -,-, 768739 LINE CR1 805 chrZ 28926042 28926177 A-rich 557 + 28926042 28926177 0 2 49,33, 0,102, +,+, 768781 Low_complexity Low_complexity 805 chrZ 28929479 28929938 GGLTR5A 371 - 28929479 28929938 0 2 156,210, 0,249, -,-, 768790 LTR ERVL 805 chrZ 28930190 28931194 CR1-H 676 + 28930190 28931194 0 2 832,171, 0,833, +,+, 768791 LINE CR1 805 chrZ 28959103 28959312 A-rich 413 + 28959103 28959312 0 2 61,95, 0,114, +,+, 768816 Low_complexity Low_complexity 806 chrZ 28991405 28991964 Char12Mar1_GG 512 - 28991405 28991964 0 2 313,219, 0,340, -,-, 768854 DNA hAT-Charlie 806 chrZ 29006517 29007056 GGERV10_LTR 865 - 29006517 29007056 0 2 218,321, 0,218, -,-, 768870 LTR ERVL 806 chrZ 29028500 29030236 CR1-Y 393 + 29028500 29030236 0 2 635,382, 0,1354, +,+, 768894 LINE CR1 806 chrZ 29036807 29038484 CR1-C4 458 + 29036807 29038484 0 2 1252,425, 0,1252, +,+, 768902 LINE CR1 806 chrZ 29038615 29039378 CR1-Y2_Aves 201 - 29038615 29039378 0 2 154,470, 0,293, -,-, 768903 LINE CR1 806 chrZ 29057924 29058269 CR1-E 605 + 29057924 29058269 0 2 88,257, 0,88, +,+, 768920 LINE CR1 806 chrZ 29075835 29079522 CR1-C 795 + 29075835 29079522 0 2 576,919, 0,2768, +,+, 768941 LINE CR1 806 chrZ 29083328 29088629 GGERVL-C-int 735 - 29083328 29088629 0 7 526,1182,1042,165,751,207,530, 0,526,1708,3618,3783,4564,4771, -,-,-,-,-,-,-, 768945 LTR ERVL 806 chrZ 29092057 29093525 CR1-F2 650 - 29092057 29093525 0 2 114,824, 0,644, -,-, 768952 LINE CR1 807 chrZ 29118439 29119981 CR1-X1 435 + 29118439 29119981 0 2 159,64, 0,1478, +,+, 768975 LINE CR1 807 chrZ 29129529 29130952 CR1-H 611 - 29129529 29130952 0 3 548,100,437, 0,548,986, -,-,-, 768986 LINE CR1 807 chrZ 29141796 29141872 (CTTT)n 516 + 29141796 29141872 0 2 29,14, 0,62, +,+, 769002 Simple_repeat Simple_repeat 807 chrZ 29145287 29145329 (TTTTTC)n 594 + 29145287 29145329 0 2 7,7, 0,35, +,+, 769012 Simple_repeat Simple_repeat 807 chrZ 29154260 29154772 CR1-E 363 - 29154260 29154772 0 2 215,297, 0,215, -,-, 769030 LINE CR1 807 chrZ 29167132 29170233 CR1-C4 450 + 29167132 29170233 0 2 235,278, 0,2823, +,+, 769042 LINE CR1 807 chrZ 29167380 29169461 CR1-F2 403 - 29167380 29169461 0 3 719,449,387, 0,1245,1694, -,-,-, 769043 LINE CR1 807 chrZ 29173168 29178558 CR1-D2 467 - 29173168 29178558 0 3 1122,1120,241, 0,3669,5149, -,-,-, 769050 LINE CR1 807 chrZ 29188845 29191476 CR1-F 766 - 29188845 29191476 0 2 1517,184, 0,2447, -,-, 769067 LINE CR1 807 chrZ 29194710 29197577 CR1-B2 769 - 29194710 29197577 0 2 950,889, 0,1978, -,-, 769074 LINE CR1 807 chrZ 29197632 29199540 CR1-Y 386 - 29197632 29199540 0 2 1370,503, 0,1405, -,-, 769077 LINE CR1 808 chrZ 29255203 29256277 CR1-F2 470 - 29255203 29256277 0 2 437,637, 0,437, -,-, 769135 LINE CR1 808 chrZ 29257559 29261022 CR1-C4 370 - 29257559 29261022 0 4 392,99,640,1588, 0,399,498,1875, -,-,-,-, 769136 LINE CR1 808 chrZ 29280026 29280613 GGLTR3D 531 + 29280026 29280613 0 2 203,348, 0,239, +,+, 769159 LTR ERVL 808 chrZ 29281381 29282209 CR1-F 296 + 29281381 29282209 0 3 253,152,189, 0,479,639, +,+,+, 769161 LINE CR1 808 chrZ 29282203 29284107 CR1-D 621 + 29282203 29284107 0 2 961,943, 0,961, +,+, 769163 LINE CR1 808 chrZ 29306689 29309167 CR1-H 716 - 29306689 29309167 0 2 14,637, 0,1841, -,-, 769182 LINE CR1 808 chrZ 29309583 29310774 CR1-Y2_Aves 90 + 29309583 29310774 0 2 226,394, 0,797, +,+, 769184 LINE CR1 808 chrZ 29324693 29326701 CR1-F 518 + 29324693 29326701 0 2 478,1530, 0,478, +,+, 769203 LINE CR1 808 chrZ 29349471 29351036 CR1-H2 313 + 29349471 29351036 0 2 188,675, 0,890, +,+, 769242 LINE CR1 808 chrZ 29351617 29355610 GGERVL-B-int 333 + 29351617 29355610 0 4 84,121,375,1393, 0,802,1835,2600, +,+,+,+, 769246 LTR ERVL 809 chrZ 29360209 29363552 CR1-F2 467 + 29360209 29363552 0 2 2760,563, 0,2780, +,+, 769257 LINE CR1 809 chrZ 29363950 29364572 GGLTR5A 374 + 29363950 29364572 0 2 382,208, 0,414, +,+, 769260 LTR ERVL 809 chrZ 29373209 29373715 CR1-C3 680 - 29373209 29373715 0 2 182,323, 0,183, -,-, 769267 LINE CR1 809 chrZ 29377351 29377951 CR1-C4 457 + 29377351 29377951 0 2 224,139, 0,461, +,+, 769269 LINE CR1 809 chrZ 29379920 29380195 CR1-X2 456 - 29379920 29380195 0 2 104,117, 0,158, -,-, 769274 LINE CR1 809 chrZ 29388320 29389696 CR1-B2 390 - 29388320 29389696 0 2 28,1338, 0,38, -,-, 769287 LINE CR1 809 chrZ 29392220 29392341 (T)n 684 + 29392220 29392341 0 2 35,28, 0,93, +,+, 769290 Simple_repeat Simple_repeat 809 chrZ 29395300 29397880 CR1-F2 307 + 29395300 29397880 0 3 2107,76,362, 0,2107,2218, +,+,+, 769295 LINE CR1 809 chrZ 29400508 29401158 GGLTR3C2 561 - 29400508 29401158 0 2 88,558, 0,92, -,-, 769301 LTR ERVL 809 chrZ 29424561 29425845 CR1-F2 430 + 29424561 29425845 0 3 325,798,127, 0,325,1157, +,+,+, 769334 LINE CR1 809 chrZ 29445990 29446683 CR1-C4 580 + 29445990 29446683 0 2 160,212, 0,481, +,+, 769371 LINE CR1 809 chrZ 29451019 29452795 CR1-D 695 - 29451019 29452795 0 2 489,210, 0,1566, -,-, 769377 LINE CR1 809 chrZ 29458017 29458152 A-rich 670 + 29458017 29458152 0 2 46,34, 0,101, +,+, 769383 Low_complexity Low_complexity 809 chrZ 29466200 29468475 CR1-Y2_Aves 263 + 29466200 29468475 0 2 763,504, 0,1771, +,+, 769397 LINE CR1 101 chrZ 29487552 29491834 GGERV10_LTR 757 + 29487552 29491834 0 4 90,160,444,3501, 0,176,337,781, +,+,+,+, 769422 LTR ERVL 810 chrZ 29512254 29513303 CR1-C 703 + 29512254 29513303 0 2 783,261, 0,788, +,+, 769452 LINE CR1 810 chrZ 29523755 29526686 CR1-D 664 + 29523755 29526686 0 2 822,1032, 0,1899, +,+, 769467 LINE CR1 810 chrZ 29528127 29528310 CR1-X1 624 . 29528127 29528310 0 2 94,84, 0,99, -,+, 769470 LINE CR1 810 chrZ 29535713 29536776 CR1-X 208 + 29535713 29536776 0 2 104,155, 0,908, +,+, 769482 LINE CR1 810 chrZ 29546145 29547848 CR1-C4 477 - 29546145 29547848 0 2 384,1319, 0,384, -,-, 769494 LINE CR1 810 chrZ 29551011 29553512 CR1-C 625 - 29551011 29553512 0 3 1454,433,613, 0,1455,1888, -,-,-, 769499 LINE CR1 810 chrZ 29559674 29560976 CR1-D 694 + 29559674 29560976 0 2 282,1020, 0,282, +,+, 769511 LINE CR1 810 chrZ 29561428 29561485 (TGTTT)n 492 + 29561428 29561485 0 2 16,7, 0,50, +,+, 769512 Simple_repeat Simple_repeat 810 chrZ 29564327 29565334 CR1-F 113 + 29564327 29565334 0 2 43,147, 0,860, +,+, 769520 LINE CR1 810 chrZ 29580019 29583377 CR1-D2 471 + 29580019 29583377 0 2 255,894, 0,2464, +,+, 769541 LINE CR1 810 chrZ 29596703 29598741 CR1-F2 343 - 29596703 29598741 0 4 1110,117,400,366, 0,1116,1240,1672, -,-,-,-, 769562 LINE CR1 811 chrZ 29623927 29628366 GGLTR11 803 + 29623927 29628366 0 4 394,1227,2542,272, 0,395,1622,4167, +,+,+,+, 769600 LTR ERV1 811 chrZ 29628484 29630214 CR1-Y4 462 - 29628484 29630214 0 2 109,1242, 0,488, -,-, 769601 LINE CR1 811 chrZ 29640312 29641969 GGLTR8A 341 + 29640312 29641969 0 2 552,282, 0,1375, +,+, 769616 LTR ERVL 811 chrZ 29658103 29658687 GGLTR5B 274 + 29658103 29658687 0 2 455,90, 0,494, +,+, 769640 LTR ERVL 811 chrZ 29659217 29659974 GGLTR3D 626 - 29659217 29659974 0 2 111,65, 0,692, -,-, 769642 LTR ERVL 811 chrZ 29663396 29664401 CR1-Y2_Aves 225 + 29663396 29664401 0 2 486,263, 0,742, +,+, 769649 LINE CR1 811 chrZ 29671221 29672168 CR1-H 659 + 29671221 29672168 0 2 610,337, 0,610, +,+, 769660 LINE CR1 811 chrZ 29676238 29676805 Char12Mar1_GG 504 - 29676238 29676805 0 2 331,186, 0,381, -,-, 769672 DNA hAT-Charlie 811 chrZ 29696870 29697942 CR1-Y4 448 - 29696870 29697942 0 2 538,534, 0,538, -,-, 769701 LINE CR1 811 chrZ 29699757 29702973 GGERV28_I-int 167 + 29699757 29702973 0 3 277,350,478, 0,1623,2738, +,+,+, 769702 LTR ERVK 811 chrZ 29713277 29714074 CR1-Y2_Aves 308 + 29713277 29714074 0 2 178,427, 0,370, +,+, 769718 LINE CR1 811 chrZ 29719592 29720262 CR1-X2 406 - 29719592 29720262 0 3 160,113,353, 0,160,317, -,-,-, 769726 LINE CR1 811 chrZ 29723960 29724961 CR1-X1 299 - 29723960 29724961 0 2 280,714, 0,287, -,-, 769736 LINE CR1 811 chrZ 29725006 29726015 CR1-Y1_Aves 314 + 29725006 29726015 0 2 284,711, 0,298, +,+, 769737 LINE CR1 101 chrZ 29753014 29753680 CR1-D2 545 + 29753014 29753680 0 3 178,69,419, 0,178,247, +,+,+, 769783 LINE CR1 812 chrZ 29757499 29760578 CR1-Y1_Aves 353 - 29757499 29760578 0 3 358,72,1967, 0,1039,1112, -,-,-, 769790 LINE CR1 812 chrZ 29763983 29765653 CR1-C4 418 + 29763983 29765653 0 2 1429,241, 0,1429, +,+, 769795 LINE CR1 812 chrZ 29771825 29772768 ENS1B-LTR 537 + 29771825 29772768 0 2 123,440, 0,503, +,+, 769803 LTR ERVL 812 chrZ 29811872 29812756 CR1-Y2_Aves 159 + 29811872 29812756 0 3 260,160,206, 0,375,678, +,+,+, 769863 LINE CR1 812 chrZ 29814746 29815850 CR1-Y1_Aves 329 + 29814746 29815850 0 2 691,327, 0,777, +,+, 769867 LINE CR1 812 chrZ 29821359 29822736 CR1-F2 862 + 29821359 29822736 0 2 790,586, 0,791, +,+, 769878 LINE CR1 812 chrZ 29866128 29867326 CR1-Y 400 - 29866128 29867326 0 2 914,259, 0,939, -,-, 769939 LINE CR1 812 chrZ 29871325 29875599 CR1-C4 429 - 29871325 29875599 0 3 474,772,423, 0,479,3851, -,-,-, 769945 LINE CR1 812 chrZ 29872576 29875159 CR1-C 754 - 29872576 29875159 0 2 574,1094, 0,1489, -,-, 769946 LINE CR1 812 chrZ 29880430 29881379 CR1-Y1_Aves 412 + 29880430 29881379 0 2 626,323, 0,626, +,+, 769956 LINE CR1 813 chrZ 29886145 29888736 CR1-Y 271 + 29886145 29888736 0 2 628,1893, 0,698, +,+, 769966 LINE CR1 813 chrZ 29889650 29893904 CR1-Y1_Aves 320 + 29889650 29893904 0 2 212,369, 0,3885, +,+, 769970 LINE CR1 813 chrZ 29889863 29893522 CR1-D 696 - 29889863 29893522 0 2 1761,1288, 0,2371, -,-, 769971 LINE CR1 813 chrZ 29896091 29897605 CR1-Y2_Aves 272 - 29896091 29897605 0 2 80,1406, 0,108, -,-, 769976 LINE CR1 813 chrZ 29904940 29905993 GGLTR8A 458 - 29904940 29905993 0 2 854,173, 0,880, -,-, 769987 LTR ERVL 813 chrZ 29909154 29912451 CR1-F 847 - 29909154 29912451 0 3 1704,715,878, 0,1704,2419, -,-,-, 769994 LINE CR1 813 chrZ 29913835 29916243 CR1-X 442 + 29913835 29916243 0 2 602,1778, 0,630, +,+, 769996 LINE CR1 813 chrZ 29934849 29935577 CR1-F2 402 + 29934849 29935577 0 2 590,129, 0,599, +,+, 770019 LINE CR1 813 chrZ 29947266 29949008 Char12Mar1_GG 563 - 29947266 29949008 0 2 644,517, 0,1225, -,-, 770030 DNA hAT-Charlie 813 chrZ 29957580 29958738 CR1-H 911 - 29957580 29958738 0 3 133,28,87, 0,1043,1071, -,-,-, 770046 LINE CR1 813 chrZ 29982690 29984865 CR1-C4 259 + 29982690 29984865 0 2 282,1245, 0,930, +,+, 770075 LINE CR1 813 chrZ 30008329 30011653 CR1-H 703 - 30008329 30011653 0 2 72,44, 0,3280, -,-, 770112 LINE CR1 813 chrZ 30008338 30009102 CR1-C4 555 - 30008338 30009102 0 2 135,629, 0,135, -,-, 770113 LINE CR1 101 chrZ 30014629 30016033 GGLTR5A 504 - 30014629 30016033 0 2 234,332, 0,1072, -,-, 770119 LTR ERVL 814 chrZ 30025202 30027109 CR1-E 387 + 30025202 30027109 0 3 264,83,257, 0,503,1650, +,+,+, 770134 LINE CR1 814 chrZ 30033284 30041827 GGLTR5A 229 + 30033284 30041827 0 3 457,38,88, 0,8385,8455, +,+,+, 770146 LTR ERVL 814 chrZ 30034934 30037916 CR1-C3 531 + 30034934 30037916 0 2 935,1135, 0,1847, +,+, 770149 LINE CR1 814 chrZ 30037909 30041639 GGERVL-B-int 342 + 30037909 30041639 0 2 686,1211, 0,2519, +,+, 770151 LTR ERVL 814 chrZ 30038592 30039064 CR1-F0 396 - 30038592 30039064 0 2 128,311, 0,161, -,-, 770152 LINE CR1 814 chrZ 30049918 30051447 CR1-D2 522 + 30049918 30051447 0 4 451,147,51,145, 0,1162,1309,1384, +,+,+,+, 770166 LINE CR1 814 chrZ 30057264 30058090 GGERVL-A-int 112 - 30057264 30058090 0 2 234,307, 0,519, -,-, 770179 LTR ERVL 814 chrZ 30059623 30061318 CR1-F0 484 - 30059623 30061318 0 3 255,679,129, 0,255,1566, -,-,-, 770182 LINE CR1 814 chrZ 30065081 30067774 CR1-Y 204 + 30065081 30067774 0 2 498,2184, 0,509, +,+, 770192 LINE CR1 814 chrZ 30072679 30074038 GGLTR5B 500 + 30072679 30074038 0 2 360,197, 0,1162, +,+, 770200 LTR ERVL 814 chrZ 30081409 30082120 GGLTR12C 527 + 30081409 30082120 0 2 113,156, 0,555, +,+, 770209 LTR ERVL 814 chrZ 30093349 30093747 GGLTR5A 328 + 30093349 30093747 0 2 214,181, 0,217, +,+, 770228 LTR ERVL 814 chrZ 30096585 30097186 GGLTR5A 437 + 30096585 30097186 0 2 500,99, 0,502, +,+, 770232 LTR ERVL 814 chrZ 30109031 30110873 CR1-Y 713 - 30109031 30110873 0 2 534,356, 0,1486, -,-, 770250 LINE CR1 814 chrZ 30115042 30118024 CR1-Y4 375 - 30115042 30118024 0 3 482,1094,193, 0,482,2789, -,-,-, 770255 LINE CR1 814 chrZ 30123591 30124120 CR1-C3 660 - 30123591 30124120 0 2 199,286, 0,243, -,-, 770266 LINE CR1 814 chrZ 30125864 30126656 CR1-Y4 566 + 30125864 30126656 0 4 114,51,53,74, 0,114,165,718, +,+,+,+, 770271 LINE CR1 814 chrZ 30133719 30135592 Char12Mar1_GG 474 - 30133719 30135592 0 3 653,415,204, 0,1254,1669, -,-,-, 770284 DNA hAT-Charlie 815 chrZ 30154360 30159336 CR1-Y1_Aves 387 - 30154360 30159336 0 3 372,128,1968, 0,2412,3008, -,-,-, 770308 LINE CR1 815 chrZ 30154745 30155574 CR1-E 256 + 30154745 30155574 0 2 682,121, 0,708, +,+, 770309 LINE CR1 815 chrZ 30156902 30157366 GGLTR3C1 380 + 30156902 30157366 0 2 339,86, 0,378, +,+, 770314 LTR ERVL 815 chrZ 30160896 30161785 CR1-Y 511 - 30160896 30161785 0 2 551,118, 0,771, -,-, 770318 LINE CR1 815 chrZ 30165153 30166116 CR1-H 768 - 30165153 30166116 0 2 368,404, 0,559, -,-, 770325 LINE CR1 815 chrZ 30166581 30167112 GGLTR3G2 735 - 30166581 30167112 0 2 47,473, 0,58, -,-, 770326 LTR ERVL 815 chrZ 30193541 30200919 GGERVL-B-int 780 + 30193541 30200919 0 4 119,600,518,578, 0,5644,6282,6800, +,+,+,+, 770372 LTR ERVL 815 chrZ 30193660 30198702 GGLTR3A 825 + 30193660 30198702 0 2 522,4520, 0,522, +,+, 770373 LTR ERVL 815 chrZ 30206260 30206344 A-rich 370 + 30206260 30206344 0 2 18,28, 0,56, +,+, 770385 Low_complexity Low_complexity 815 chrZ 30213332 30215031 ENS1B-LTR 268 - 30213332 30215031 0 2 388,266, 0,1433, -,-, 770401 LTR ERVL 815 chrZ 30218263 30220260 CR1-F2 505 - 30218263 30220260 0 3 127,1290,580, 0,127,1417, -,-,-, 770408 LINE CR1 815 chrZ 30221435 30221806 GGERVL18-LTR 764 + 30221435 30221806 0 2 202,136, 0,235, +,+, 770411 LTR ERVL 815 chrZ 30228073 30231205 CR1-Y1_Aves 385 - 30228073 30231205 0 2 78,305, 0,2827, -,-, 770420 LINE CR1 815 chrZ 30230209 30230287 A-rich 544 + 30230209 30230287 0 2 24,18, 0,60, +,+, 770424 Low_complexity Low_complexity 815 chrZ 30232653 30233524 CR1-F2 426 - 30232653 30233524 0 2 271,600, 0,271, -,-, 770429 LINE CR1 815 chrZ 30246098 30246781 GGLTR12C 621 - 30246098 30246781 0 2 210,452, 0,231, -,-, 770447 LTR ERVL 815 chrZ 30246808 30251797 GGERVL18-int 687 - 30246808 30251797 0 3 2442,2206,336, 0,2442,4653, -,-,-, 770449 LTR ERVL 815 chrZ 30254321 30255240 GGLTR3C2 434 + 30254321 30255240 0 2 433,161, 0,758, +,+, 770455 LTR ERVL 815 chrZ 30262462 30264114 CR1-F 394 - 30262462 30264114 0 2 311,520, 0,1132, -,-, 770470 LINE CR1 816 chrZ 30279626 30280025 TguLTR5e 468 - 30279626 30280025 0 2 75,167, 0,232, -,-, 770492 LTR ERVL 816 chrZ 30282657 30283378 GGLTR8A 438 - 30282657 30283378 0 3 86,121,136, 0,86,585, -,-,-, 770497 LTR ERVL 816 chrZ 30293411 30294805 CR1-Y2_Aves 193 - 30293411 30294805 0 2 522,258, 0,1136, -,-, 770511 LINE CR1 816 chrZ 30293940 30294519 TguLTR5e 207 - 30293940 30294519 0 2 149,272, 0,307, -,-, 770512 LTR ERVL 816 chrZ 30295878 30298601 CR1-C4 516 + 30295878 30298601 0 2 396,646, 0,2077, +,+, 770517 LINE CR1 816 chrZ 30296275 30297956 CR1-E 660 - 30296275 30297956 0 2 1434,218, 0,1463, -,-, 770518 LINE CR1 816 chrZ 30302297 30310048 CR1-C 825 - 30302297 30310048 0 2 152,1269, 0,6482, -,-, 770527 LINE CR1 816 chrZ 30302449 30308245 GGLTR3F2 717 + 30302449 30308245 0 3 231,214,5297, 0,284,499, +,+,+, 770528 LTR ERVL 816 chrZ 30308245 30308779 GGLTR3F2 741 + 30308245 30308779 0 3 36,231,214, 0,36,320, +,+,+, 770530 LTR ERVL 816 chrZ 30316796 30317503 GGLTR8B 402 + 30316796 30317503 0 2 391,315, 0,392, +,+, 770543 LTR ERVL 816 chrZ 30325625 30325748 A-rich 615 + 30325625 30325748 0 2 30,40, 0,83, +,+, 770554 Low_complexity Low_complexity 816 chrZ 30354010 30355020 CR1-H 789 - 30354010 30355020 0 2 284,726, 0,284, -,-, 770601 LINE CR1 816 chrZ 30362581 30362994 (AT)n 646 + 30362581 30362994 0 2 43,351, 0,62, +,+, 770612 Simple_repeat Simple_repeat 816 chrZ 30367366 30370327 CR1-D 582 + 30367366 30370327 0 2 201,2760, 0,201, +,+, 770617 LINE CR1 12 chrZ 30403431 30410245 CR1-Y4 451 + 30403431 30410245 0 3 1516,781,178, 0,5845,6636, +,+,+, 770664 LINE CR1 12 chrZ 30404974 30409262 CR1-X 360 + 30404974 30409262 0 3 1519,209,52, 0,2817,4236, +,+,+, 770665 LINE CR1 816 chrZ 30405142 30407020 CR1-F 411 + 30405142 30407020 0 2 1604,266, 0,1612, +,+, 770666 LINE CR1 817 chrZ 30410546 30413175 Mariner1_GG 536 - 30410546 30413175 0 2 515,624, 0,2005, -,-, 770669 DNA TcMar-Mariner 817 chrZ 30415473 30417038 CR1-Y1_Aves 372 - 30415473 30417038 0 2 83,438, 0,1127, -,-, 770675 LINE CR1 817 chrZ 30421298 30422384 CR1-C4 475 - 30421298 30422384 0 2 626,460, 0,626, -,-, 770689 LINE CR1 817 chrZ 30424301 30431627 CR1-C3 424 - 30424301 30431627 0 4 107,715,488,698, 0,107,4416,6628, -,-,-,-, 770691 LINE CR1 817 chrZ 30445795 30446711 CR1-Y2 754 + 30445795 30446711 0 2 741,175, 0,741, +,+, 770724 LINE CR1 817 chrZ 30449948 30450443 CR1-Y2_Aves 266 - 30449948 30450443 0 2 264,139, 0,356, -,-, 770734 LINE CR1 817 chrZ 30457653 30467144 CR1-G 226 + 30457653 30467144 0 3 310,128,656, 0,895,8835, +,+,+, 770746 LINE CR1 817 chrZ 30460531 30465678 CR1-X 179 + 30460531 30465678 0 5 404,424,293,569,674, 0,582,1864,3114,4473, +,+,+,+,+, 770751 LINE CR1 817 chrZ 30461818 30462366 GGLTR11-int 464 - 30461818 30462366 0 2 220,77, 0,471, -,-, 770753 LTR ERV1 817 chrZ 30469627 30469723 (AT)n 182 + 30469627 30469723 0 2 7,42, 0,54, +,+, 770765 Simple_repeat Simple_repeat 817 chrZ 30470079 30471568 GGLTR5A 322 + 30470079 30471568 0 2 249,241, 0,1248, +,+, 770770 LTR ERVL 817 chrZ 30478441 30479011 GGLTR5B 204 + 30478441 30479011 0 2 401,144, 0,426, +,+, 770781 LTR ERVL 817 chrZ 30480910 30484555 CR1-Y 460 - 30480910 30484555 0 2 3546,71, 0,3574, -,-, 770787 LINE CR1 817 chrZ 30492600 30494948 CR1-C4 505 - 30492600 30494948 0 4 113,653,589,279, 0,116,795,2069, -,-,-,-, 770799 LINE CR1 817 chrZ 30493986 30494571 GGLTR11-int 493 + 30493986 30494571 0 2 115,227, 0,358, +,+, 770801 LTR ERV1 817 chrZ 30504854 30506952 CR1-H2 500 + 30504854 30506952 0 2 1124,340, 0,1758, +,+, 770812 LINE CR1 817 chrZ 30527484 30528611 CR1-F0 822 + 30527484 30528611 0 2 138,99, 0,1028, +,+, 770834 LINE CR1 817 chrZ 30531606 30534626 CR1-D2 500 - 30531606 30534626 0 2 165,2521, 0,499, -,-, 770840 LINE CR1 817 chrZ 30531771 30531863 GGERV21_LTR 672 + 30531771 30531863 0 2 46,46, 0,46, +,+, 770841 LTR ERVL 817 chrZ 30538148 30539221 CR1-Y3 686 - 30538148 30539221 0 2 709,364, 0,709, -,-, 770846 LINE CR1 818 chrZ 30544132 30546392 CR1-F2 395 + 30544132 30546392 0 3 145,256,1172, 0,481,1088, +,+,+, 770853 LINE CR1 818 chrZ 30549836 30552013 CR1-G 854 - 30549836 30552013 0 2 60,1182, 0,995, -,-, 770860 LINE CR1 818 chrZ 30575019 30575101 (ACAA)n 376 + 30575019 30575101 0 2 34,8, 0,74, +,+, 770891 Simple_repeat Simple_repeat 818 chrZ 30584891 30587463 CR1-G 739 + 30584891 30587463 0 2 740,1832, 0,740, +,+, 770905 LINE CR1 818 chrZ 30634331 30634627 CR1-C4 469 - 30634331 30634627 0 2 269,27, 0,269, -,-, 770963 LINE CR1 818 chrZ 30649625 30649989 Mariner1b_GG 450 + 30649625 30649989 0 2 193,146, 0,218, +,+, 770980 DNA TcMar-Mariner 818 chrZ 30652616 30653431 GGLTR3D 644 + 30652616 30653431 0 2 550,71, 0,744, +,+, 770984 LTR ERVL 818 chrZ 30659987 30660547 CR1-Y1_Aves 359 - 30659987 30660547 0 2 211,203, 0,357, -,-, 770990 LINE CR1 102 chrZ 30666767 30673486 CR1-F 347 + 30666767 30673486 0 3 1024,85,822, 0,3879,5897, +,+,+, 771001 LINE CR1 102 chrZ 30670659 30672118 CR1-Y2_Aves 271 + 30670659 30672118 0 3 510,168,199, 0,529,1260, +,+,+, 771005 LINE CR1 819 chrZ 30688606 30691600 CR1-D 436 + 30688606 30691600 0 2 1014,1707, 0,1287, +,+, 771023 LINE CR1 819 chrZ 30703705 30704424 CR1-C 784 + 30703705 30704424 0 2 207,512, 0,207, +,+, 771038 LINE CR1 819 chrZ 30715890 30720044 CR1-E 195 + 30715890 30720044 0 3 162,935,114, 0,1800,4040, +,+,+, 771053 LINE CR1 819 chrZ 30722081 30722959 GGERVL-C-int 354 - 30722081 30722959 0 2 394,459, 0,419, -,-, 771064 LTR ERVL 819 chrZ 30749763 30751927 ENS1-int 701 - 30749763 30751927 0 2 1201,956, 0,1208, -,-, 771100 LTR ERVL 819 chrZ 30754694 30757867 Mariner1_GG 569 - 30754694 30757867 0 2 406,878, 0,2295, -,-, 771102 DNA TcMar-Mariner 819 chrZ 30758742 30758987 (CTCCT)n 620 + 30758742 30758987 0 2 9,207, 0,38, +,+, 771105 Simple_repeat Simple_repeat 820 chrZ 30811283 30812419 CR1-D2 604 - 30811283 30812419 0 2 52,970, 0,166, -,-, 771147 LINE CR1 820 chrZ 30885354 30886208 CR1-C4 581 + 30885354 30886208 0 2 444,410, 0,444, +,+, 771213 LINE CR1 820 chrZ 30897689 30900612 CR1-C 811 - 30897689 30900612 0 2 1405,1518, 0,1405, -,-, 771222 LINE CR1 821 chrZ 30943591 30946883 CR1-X2 455 - 30943591 30946883 0 4 575,128,176,254, 0,1084,1220,3038, -,-,-,-, 771260 LINE CR1 821 chrZ 30956161 30956770 GGLTR3B4 613 + 30956161 30956770 0 2 88,521, 0,88, +,+, 771271 LTR ERVL 821 chrZ 30961447 30961898 GGERVL-B-int 525 + 30961447 30961898 0 2 329,121, 0,330, +,+, 771277 LTR ERVL 821 chrZ 30967436 30968125 CR1-D 748 - 30967436 30968125 0 2 603,86, 0,603, -,-, 771283 LINE CR1 821 chrZ 31019114 31019441 GGERV10_LTR 588 + 31019114 31019441 0 2 81,160, 0,167, +,+, 771317 LTR ERVL 822 chrZ 31117950 31125402 Mariner1b_GG 551 - 31117950 31125402 0 2 280,184, 0,7268, -,-, 771396 DNA TcMar-Mariner 822 chrZ 31121801 31122998 CR1-F2 546 - 31121801 31122998 0 2 1074,123, 0,1074, -,-, 771402 LINE CR1 822 chrZ 31132369 31132950 CR1-D2 277 - 31132369 31132950 0 2 106,193, 0,388, -,-, 771418 LINE CR1 822 chrZ 31135982 31142029 CR1-Y4 491 + 31135982 31142029 0 3 695,823,340, 0,706,5707, +,+,+, 771423 LINE CR1 822 chrZ 31137511 31141671 GGLTR10A 943 + 31137511 31141671 0 3 313,3530,313, 0,315,3847, +,+,+, 771424 LTR ERVK 822 chrZ 31142064 31143672 GGERVL-B-int 246 - 31142064 31143672 0 2 1107,272, 0,1336, -,-, 771425 LTR ERVL 822 chrZ 31144480 31144887 CR1-F2 464 + 31144480 31144887 0 2 161,246, 0,161, +,+, 771429 LINE CR1 822 chrZ 31178757 31179058 Char12Mar1_GG 550 - 31178757 31179058 0 2 63,238, 0,63, -,-, 771466 DNA hAT-Charlie 822 chrZ 31189684 31191753 CR1-Y2 699 - 31189684 31191753 0 3 231,110,1047, 0,563,1022, -,-,-, 771475 LINE CR1 823 chrZ 31196753 31198361 CR1-Y 405 + 31196753 31198361 0 2 703,902, 0,706, +,+, 771482 LINE CR1 823 chrZ 31210299 31212081 CR1-Y4 452 - 31210299 31212081 0 3 943,540,221, 0,943,1561, -,-,-, 771493 LINE CR1 823 chrZ 31215004 31215259 GGLTR8B 341 - 31215004 31215259 0 2 80,175, 0,80, -,-, 771498 LTR ERVL 823 chrZ 31215261 31215697 CR1-X 388 - 31215261 31215697 0 2 121,280, 0,156, -,-, 771499 LINE CR1 823 chrZ 31215730 31216942 CR1-F2 496 + 31215730 31216942 0 2 63,1149, 0,63, +,+, 771500 LINE CR1 823 chrZ 31232052 31232383 (CAGG)n 387 + 31232052 31232383 0 2 116,215, 0,116, +,+, 771528 Simple_repeat Simple_repeat 823 chrZ 31233894 31233973 (CCAG)n 1000 + 31233894 31233973 0 2 27,27, 0,52, +,+, 771536 Simple_repeat Simple_repeat 823 chrZ 31237162 31237276 (AGGCC)n 342 + 31237162 31237276 0 2 30,16, 0,98, +,+, 771554 Simple_repeat Simple_repeat 823 chrZ 31238518 31239715 CR1-F2 765 - 31238518 31239715 0 2 140,1057, 0,140, -,-, 771563 LINE CR1 823 chrZ 31240376 31240811 (CAGG)n 371 + 31240376 31240811 0 2 207,217, 0,218, +,+, 771568 Simple_repeat Simple_repeat 823 chrZ 31286737 31289281 Charlie12_GG 463 - 31286737 31289281 0 3 241,278,1725, 0,516,819, -,-,-, 771653 DNA hAT-Charlie 823 chrZ 31314703 31315779 Charlie12_GG 507 - 31314703 31315779 0 3 83,58,391, 0,599,685, -,-,-, 771668 DNA hAT-Charlie 823 chrZ 31321529 31322248 OldhAT1 124 - 31321529 31322248 0 2 201,231, 0,488, -,-, 771677 DNA hAT-Ac 824 chrZ 31330358 31331756 CR1-Y4 352 + 31330358 31331756 0 2 1125,273, 0,1125, +,+, 771691 LINE CR1 824 chrZ 31347367 31350122 CR1-Y3 565 + 31347367 31350122 0 3 799,477,150, 0,1022,2605, +,+,+, 771707 LINE CR1 824 chrZ 31348167 31348389 GGLTR3A 753 - 31348167 31348389 0 2 31,166, 0,56, -,-, 771708 LTR ERVL 824 chrZ 31348862 31349975 ENS1B-LTR 565 - 31348862 31349975 0 3 338,64,56, 0,367,1057, -,-,-, 771709 LTR ERVL 824 chrZ 31429926 31430399 GGLTR5B 208 + 31429926 31430399 0 2 237,160, 0,313, +,+, 771783 LTR ERVL 825 chrZ 31507881 31508678 GGLTR8B 265 + 31507881 31508678 0 2 328,251, 0,546, +,+, 771842 LTR ERVL 825 chrZ 31577345 31578693 CR1-D 710 + 31577345 31578693 0 2 398,853, 0,495, +,+, 771900 LINE CR1 826 chrZ 31605763 31607839 CR1-D2 679 - 31605763 31607839 0 2 587,320, 0,1756, -,-, 771921 LINE CR1 827 chrZ 31722263 31722367 (T)n 799 + 31722263 31722367 0 2 17,36, 0,68, +,+, 771998 Simple_repeat Simple_repeat 827 chrZ 31788727 31790164 CR1-C 642 - 31788727 31790164 0 2 1342,95, 0,1342, -,-, 772036 LINE CR1 827 chrZ 31796918 31797704 CR1-D 790 - 31796918 31797704 0 2 47,442, 0,344, -,-, 772040 LINE CR1 827 chrZ 31835349 31836887 CR1-Y2_Aves 262 - 31835349 31836887 0 2 774,218, 0,1320, -,-, 772064 LINE CR1 828 chrZ 31865001 31865651 CR1-C4 581 - 31865001 31865651 0 3 487,71,92, 0,487,558, -,-,-, 772085 LINE CR1 828 chrZ 31886268 31886794 CR1-D2 571 - 31886268 31886794 0 2 159,356, 0,170, -,-, 772098 LINE CR1 828 chrZ 31890636 31892354 GGERVL-B-int 349 + 31890636 31892354 0 2 769,460, 0,1258, +,+, 772101 LTR ERVL 828 chrZ 31914715 31916000 CR1-X2 598 - 31914715 31916000 0 2 158,526, 0,759, -,-, 772117 LINE CR1 828 chrZ 31919856 31922699 CR1-X 538 - 31919856 31922699 0 2 2055,784, 0,2059, -,-, 772120 LINE CR1 828 chrZ 31953978 31955769 CR1-Y1_Aves 220 + 31953978 31955769 0 2 1008,721, 0,1070, +,+, 772133 LINE CR1 828 chrZ 31975037 31978136 CR1-Y4 287 + 31975037 31978136 0 3 541,351,171, 0,541,2928, +,+,+, 772144 LINE CR1 828 chrZ 31975924 31977964 CR1-F2 521 + 31975924 31977964 0 2 1005,71, 0,1969, +,+, 772145 LINE CR1 829 chrZ 31988926 31990402 CR1-E 382 - 31988926 31990402 0 2 337,554, 0,922, -,-, 772154 LINE CR1 829 chrZ 31994372 31995133 CR1-X1 369 - 31994372 31995133 0 2 76,646, 0,115, -,-, 772159 LINE CR1 829 chrZ 32008736 32009719 CR1-C4 395 + 32008736 32009719 0 2 415,562, 0,421, +,+, 772166 LINE CR1 829 chrZ 32014564 32016643 CR1-F2 379 - 32014564 32016643 0 2 799,1172, 0,907, -,-, 772171 LINE CR1 829 chrZ 32024273 32026143 CR1-Y2_Aves 333 - 32024273 32026143 0 2 908,939, 0,931, -,-, 772178 LINE CR1 829 chrZ 32026149 32026900 CR1-Y2_Aves 290 + 32026149 32026900 0 2 86,218, 0,533, +,+, 772179 LINE CR1 829 chrZ 32055579 32057019 CR1-C2 573 + 32055579 32057019 0 2 926,510, 0,930, +,+, 772195 LINE CR1 829 chrZ 32063488 32064050 TguLTR5d 254 - 32063488 32064050 0 2 285,238, 0,324, -,-, 772198 LTR ERVL 829 chrZ 32066308 32068404 CR1-X 202 - 32066308 32068404 0 2 1402,287, 0,1809, -,-, 772202 LINE CR1 829 chrZ 32077330 32077971 CR1-Y1_Aves 283 - 32077330 32077971 0 2 263,378, 0,263, -,-, 772208 LINE CR1 829 chrZ 32111309 32112038 GGERVL-C-int 407 - 32111309 32112038 0 2 501,228, 0,501, -,-, 772225 LTR ERVL 830 chrZ 32145163 32146621 CR1-C4 254 + 32145163 32146621 0 2 1102,339, 0,1119, +,+, 772247 LINE CR1 830 chrZ 32146648 32146989 CR1-X1 358 - 32146648 32146989 0 2 110,231, 0,110, -,-, 772248 LINE CR1 830 chrZ 32157990 32158850 CR1-C4 459 + 32157990 32158850 0 3 199,504,157, 0,199,703, +,+,+, 772259 LINE CR1 830 chrZ 32165454 32166249 CR1-H 833 + 32165454 32166249 0 2 390,405, 0,390, +,+, 772261 LINE CR1 830 chrZ 32180663 32182028 CR1-C3 599 + 32180663 32182028 0 3 451,793,120, 0,451,1245, +,+,+, 772273 LINE CR1 830 chrZ 32189732 32198429 Char12Mar1_GG 674 - 32189732 32198429 0 2 557,59, 0,8638, -,-, 772278 DNA hAT-Charlie 830 chrZ 32196509 32196584 (CTTT)n 380 + 32196509 32196584 0 2 11,18, 0,57, +,+, 772282 Simple_repeat Simple_repeat 830 chrZ 32211373 32212000 CR1-E 144 + 32211373 32212000 0 2 216,182, 0,445, +,+, 772299 LINE CR1 830 chrZ 32212627 32215792 CR1-Y4 393 + 32212627 32215792 0 3 114,791,976, 0,1208,2189, +,+,+, 772301 LINE CR1 830 chrZ 32222730 32226971 GGLTR10A 975 + 32222730 32226971 0 3 313,3611,313, 0,315,3928, +,+,+, 772313 LTR ERVK 103 chrZ 32229960 32244155 Char12Mar1_GG 628 - 32229960 32244155 0 3 43,43,43, 0,7240,14152, -,-,-, 772320 DNA hAT-Charlie 831 chrZ 32285793 32286276 X1_LINE 499 - 32285793 32286276 0 2 165,280, 0,203, -,-, 772368 LINE CR1 832 chrZ 32501302 32502399 LFSINE_Vert 154 - 32501302 32502399 0 2 217,134, 0,963, -,-, 772534 SINE tRNA 833 chrZ 32509992 32510099 (TTTG)n 452 + 32509992 32510099 0 2 9,48, 0,59, +,+, 772546 Simple_repeat Simple_repeat 833 chrZ 32546527 32547679 TguLTR5e 441 + 32546527 32547679 0 3 235,67,103, 0,655,1049, +,+,+, 772578 LTR ERVL 833 chrZ 32615153 32619054 CR1-Y1_Aves 301 + 32615153 32619054 0 4 1474,70,105,107, 0,2643,2739,3794, +,+,+,+, 772634 LINE CR1 833 chrZ 32632619 32633388 CR1-X2 561 - 32632619 32633388 0 2 85,382, 0,387, -,-, 772647 LINE CR1 834 chrZ 32642230 32642272 (TTTA)n 500 + 32642230 32642272 0 2 6,7, 0,35, +,+, 772656 Simple_repeat Simple_repeat 834 chrZ 32763365 32764473 CR1-Y4 246 + 32763365 32764473 0 2 439,257, 0,851, +,+, 772748 LINE CR1 835 chrZ 32788891 32789602 CR1-Y1_Aves 380 - 32788891 32789602 0 2 335,43, 0,668, -,-, 772763 LINE CR1 835 chrZ 32790969 32791737 CR1-D2 607 - 32790969 32791737 0 2 221,547, 0,221, -,-, 772766 LINE CR1 835 chrZ 32805614 32806949 CR1-Y1_Aves 128 + 32805614 32806949 0 2 174,529, 0,806, +,+, 772771 LINE CR1 835 chrZ 32806944 32807607 GGLTR8B 475 + 32806944 32807607 0 2 353,176, 0,487, +,+, 772772 LTR ERVL 835 chrZ 32812788 32815410 CR1-Y2_Aves 181 - 32812788 32815410 0 3 1048,123,1405, 0,1061,1217, -,-,-, 772777 LINE CR1 835 chrZ 32893968 32895100 CR1-D2 701 - 32893968 32895100 0 2 43,984, 0,148, -,-, 772847 LINE CR1 836 chrZ 32922912 32924494 CR1-L3B_Croc 259 + 32922912 32924494 0 2 191,447, 0,1135, +,+, 772871 LINE CR1 836 chrZ 32933192 32933625 CR1-C4 503 - 32933192 32933625 0 2 359,74, 0,359, -,-, 772877 LINE CR1 836 chrZ 32955028 32956736 GGERVL-C-int 795 + 32955028 32956736 0 2 1183,525, 0,1183, +,+, 772888 LTR ERVL 836 chrZ 32964006 32964677 GGLTR8B 420 + 32964006 32964677 0 2 75,567, 0,104, +,+, 772894 LTR ERVL 836 chrZ 32998030 32998823 GGLTR8A 478 - 32998030 32998823 0 2 73,720, 0,73, -,-, 772923 LTR ERVL 837 chrZ 33048161 33048257 (TGTTTT)n 298 + 33048161 33048257 0 2 39,18, 0,78, +,+, 772963 Simple_repeat Simple_repeat 837 chrZ 33063248 33063952 GGLTR8A 562 + 33063248 33063952 0 2 200,493, 0,211, +,+, 772969 LTR ERVL 837 chrZ 33075234 33077108 CR1-C3 655 + 33075234 33077108 0 3 496,600,778, 0,496,1096, +,+,+, 772978 LINE CR1 837 chrZ 33124537 33125612 CR1-Y4 474 + 33124537 33125612 0 2 535,526, 0,549, +,+, 773017 LINE CR1 838 chrZ 33177265 33179291 CR1-Y4 472 + 33177265 33179291 0 2 1759,267, 0,1759, +,+, 773063 LINE CR1 838 chrZ 33215753 33218990 CR1-C4 561 - 33215753 33218990 0 4 907,940,390,50, 0,907,2795,3187, -,-,-,-, 773094 LINE CR1 838 chrZ 33230811 33231322 GGLTR8B 412 - 33230811 33231322 0 2 456,55, 0,456, -,-, 773105 LTR ERVL 838 chrZ 33243120 33244791 TguLTR5e 531 - 33243120 33244791 0 2 73,76, 0,1595, -,-, 773122 LTR ERVL 838 chrZ 33256906 33259484 CR1-Y3 541 + 33256906 33259484 0 3 507,1947,124, 0,507,2454, +,+,+, 773135 LINE CR1 838 chrZ 33269363 33270949 Mariner1_GG 579 - 33269363 33270949 0 2 430,58, 0,1528, -,-, 773140 DNA TcMar-Mariner 838 chrZ 33284595 33286127 CR1-Y2_Aves 301 + 33284595 33286127 0 2 1171,289, 0,1243, +,+, 773152 LINE CR1 839 chrZ 33296970 33302607 GGLTR7-int 434 - 33296970 33302607 0 6 334,275,2675,854,427,329, 0,503,900,3583,4879,5308, -,-,-,-,-,-, 773161 LTR ERV1 839 chrZ 33303352 33303597 CR1-Y1_Aves 400 + 33303352 33303597 0 2 118,127, 0,118, +,+, 773162 LINE CR1 839 chrZ 33307310 33309121 CR1-Y1_Aves 477 - 33307310 33309121 0 2 59,126, 0,1685, -,-, 773165 LINE CR1 839 chrZ 33307368 33308999 CR1-G 828 + 33307368 33308999 0 2 225,1125, 0,506, +,+, 773166 LINE CR1 839 chrZ 33313189 33314381 CR1-D2 585 + 33313189 33314381 0 2 361,831, 0,361, +,+, 773170 LINE CR1 839 chrZ 33316893 33317905 Mariner1_GG 583 - 33316893 33317905 0 2 832,180, 0,832, -,-, 773174 DNA TcMar-Mariner 839 chrZ 33327962 33329718 CR1-Y4 511 + 33327962 33329718 0 3 281,293,882, 0,581,874, +,+,+, 773182 LINE CR1 839 chrZ 33384747 33385424 CR1-C4 457 + 33384747 33385424 0 2 228,148, 0,529, +,+, 773228 LINE CR1 839 chrZ 33384975 33386492 CR1-E 319 + 33384975 33386492 0 2 32,119, 0,1398, +,+, 773230 LINE CR1 839 chrZ 33400068 33400725 CR1-H 793 + 33400068 33400725 0 2 507,136, 0,521, +,+, 773244 LINE CR1 839 chrZ 33407661 33408703 CR1-E 346 - 33407661 33408703 0 2 667,350, 0,692, -,-, 773254 LINE CR1 840 chrZ 33433779 33433883 (TTTGG)n 530 + 33433779 33433883 0 2 29,33, 0,71, +,+, 773270 Simple_repeat Simple_repeat 840 chrZ 33528341 33528981 CR1-C4 565 + 33528341 33528981 0 2 122,509, 0,131, +,+, 773318 LINE CR1 841 chrZ 33556327 33559296 CR1-C4 495 - 33556327 33559296 0 3 386,1157,522, 0,1290,2447, -,-,-, 773341 LINE CR1 841 chrZ 33579303 33580202 CR1-C4 392 + 33579303 33580202 0 2 532,367, 0,532, +,+, 773351 LINE CR1 841 chrZ 33589678 33589780 (ATATAT)n 414 + 33589678 33589780 0 2 16,6, 0,96, +,+, 773358 Simple_repeat Simple_repeat 841 chrZ 33614476 33615732 CR1-F2 545 + 33614476 33615732 0 2 85,628, 0,628, +,+, 773372 LINE CR1 841 chrZ 33635806 33637050 CR1-X2 200 - 33635806 33637050 0 2 899,254, 0,990, -,-, 773389 LINE CR1 841 chrZ 33642205 33648172 GGERVL-A-int 668 + 33642205 33648172 0 2 505,5461, 0,506, +,+, 773395 LTR ERVL 842 chrZ 33733406 33734218 CR1-D2 729 - 33733406 33734218 0 2 208,576, 0,236, -,-, 773454 LINE CR1 842 chrZ 33743244 33743862 CR1-Y4 537 + 33743244 33743862 0 2 186,93, 0,525, +,+, 773459 LINE CR1 843 chrZ 33827742 33828346 CR1-C4 593 - 33827742 33828346 0 2 250,354, 0,250, -,-, 773508 LINE CR1 843 chrZ 33899409 33899586 GGLTR5B 0 + 33899409 33899586 0 2 127,11, 0,166, +,+, 773560 LTR ERVL 843 chrZ 33914992 33916130 CR1-F2 378 - 33914992 33916130 0 2 988,150, 0,988, -,-, 773571 LINE CR1 844 chrZ 33971539 33974048 CR1-C3 625 - 33971539 33974048 0 2 789,208, 0,2301, -,-, 773602 LINE CR1 844 chrZ 34011473 34012081 CR1-Y 773 + 34011473 34012081 0 2 231,55, 0,553, +,+, 773629 LINE CR1 844 chrZ 34052873 34053685 CR1-Y4 557 - 34052873 34053685 0 2 88,456, 0,356, -,-, 773649 LINE CR1 844 chrZ 34066351 34066766 GGLTR5A 215 - 34066351 34066766 0 2 20,275, 0,140, -,-, 773667 LTR ERVL 844 chrZ 34070691 34071374 CR1-Y1_Aves 132 - 34070691 34071374 0 2 562,121, 0,562, -,-, 773671 LINE CR1 845 chrZ 34127428 34127866 GGERVL-A-int 472 + 34127428 34127866 0 2 366,72, 0,366, +,+, 773695 LTR ERVL 845 chrZ 34180460 34182674 CR1-B2 467 + 34180460 34182674 0 2 121,149, 0,2065, +,+, 773731 LINE CR1 846 chrZ 34257624 34257676 (TTTTAA)n 384 + 34257624 34257676 0 2 14,12, 0,40, +,+, 773769 Simple_repeat Simple_repeat 846 chrZ 34261317 34262085 GGLTR8B 248 - 34261317 34262085 0 2 131,367, 0,401, -,-, 773772 LTR ERVL 846 chrZ 34288086 34290608 CR1-G 319 + 34288086 34290608 0 3 71,1013,709, 0,153,1813, +,+,+, 773791 LINE CR1 846 chrZ 34289270 34289899 GGLTR3G1 424 + 34289270 34289899 0 2 518,82, 0,547, +,+, 773792 LTR ERVL 846 chrZ 34301828 34304443 GGLTR11 727 + 34301828 34304443 0 2 2080,535, 0,2080, +,+, 773798 LTR ERV1 846 chrZ 34316912 34319527 GGLTR11 727 + 34316912 34319527 0 2 2080,535, 0,2080, +,+, 773807 LTR ERV1 846 chrZ 34332295 34334910 GGLTR11 727 + 34332295 34334910 0 2 2080,535, 0,2080, +,+, 773816 LTR ERV1 847 chrZ 34396811 34399418 GGLTR11 724 + 34396811 34399418 0 2 2072,535, 0,2072, +,+, 773827 LTR ERV1 847 chrZ 34411845 34414461 GGLTR11 731 + 34411845 34414461 0 2 2081,535, 0,2081, +,+, 773838 LTR ERV1 847 chrZ 34447457 34448082 CR1-X2 185 + 34447457 34448082 0 2 576,15, 0,610, +,+, 773867 LINE CR1 847 chrZ 34454183 34456207 CR1-Y2_Aves 399 + 34454183 34456207 0 2 1106,467, 0,1557, +,+, 773876 LINE CR1 848 chrZ 34498574 34500000 CR1-C4 629 + 34498574 34500000 0 2 224,522, 0,904, +,+, 773896 LINE CR1 848 chrZ 34501390 34502664 CR1-H 819 - 34501390 34502664 0 2 823,451, 0,823, -,-, 773901 LINE CR1 849 chrZ 34629001 34629129 CR1-X2 376 + 34629001 34629129 0 2 13,115, 0,13, +,+, 773964 LINE CR1 849 chrZ 34640609 34640932 CR1-F2 314 + 34640609 34640932 0 2 117,206, 0,117, +,+, 773974 LINE CR1 849 chrZ 34656515 34658689 GGERV28_I-int 329 - 34656515 34658689 0 3 334,427,49, 0,1648,2125, -,-,-, 773980 LTR ERVK 849 chrZ 34707428 34707803 CR1-C4 611 - 34707428 34707803 0 2 324,51, 0,324, -,-, 774008 LINE CR1 850 chrZ 34758896 34759478 GGLTR8A 364 + 34758896 34759478 0 2 160,375, 0,207, +,+, 774033 LTR ERVL 850 chrZ 34804450 34805338 CR1-X2 454 + 34804450 34805338 0 2 206,682, 0,206, +,+, 774070 LINE CR1 850 chrZ 34848695 34849085 CR1-Y1_Aves 429 + 34848695 34849085 0 2 124,266, 0,124, +,+, 774105 LINE CR1 850 chrZ 34849178 34850283 CR1-X2 571 - 34849178 34850283 0 2 795,310, 0,795, -,-, 774106 LINE CR1 851 chrZ 34893586 34895906 CR1-D 511 - 34893586 34895906 0 2 289,1501, 0,819, -,-, 774142 LINE CR1 851 chrZ 34951750 34952923 ENS3-int 218 - 34951750 34952923 0 2 389,164, 0,1009, -,-, 774170 LTR ERVL 851 chrZ 34958130 34960092 CR1-Y3 490 - 34958130 34960092 0 2 1048,906, 0,1056, -,-, 774174 LINE CR1 851 chrZ 34964417 34965185 GGLTR8B 523 - 34964417 34965185 0 2 130,623, 0,145, -,-, 774177 LTR ERVL 851 chrZ 34976839 34979176 CR1-C4 537 - 34976839 34979176 0 2 1388,689, 0,1648, -,-, 774184 LINE CR1 851 chrZ 34978229 34978498 CR1-Y4 590 - 34978229 34978498 0 2 209,60, 0,209, -,-, 774185 LINE CR1 851 chrZ 34979174 34979440 CR1-D2 726 - 34979174 34979440 0 2 128,138, 0,128, -,-, 774186 LINE CR1 851 chrZ 34987894 34989073 CR1-Y1_Aves 296 - 34987894 34989073 0 2 117,187, 0,992, -,-, 774196 LINE CR1 852 chrZ 35000008 35002649 CR1-F2 407 + 35000008 35002649 0 2 1187,370, 0,2271, +,+, 774203 LINE CR1 852 chrZ 35018050 35018169 (T)n 723 + 35018050 35018169 0 2 41,32, 0,87, +,+, 774211 Simple_repeat Simple_repeat 852 chrZ 35055443 35059033 CR1-C4 505 - 35055443 35059033 0 2 751,383, 0,3207, -,-, 774237 LINE CR1 853 chrZ 35247936 35248742 GGLTR5A 525 + 35247936 35248742 0 2 289,169, 0,637, +,+, 774354 LTR ERVL 853 chrZ 35253376 35253979 CR1-Y1_Aves 524 - 35253376 35253979 0 2 76,527, 0,76, -,-, 774361 LINE CR1 854 chrZ 35264808 35265376 CR1-D2 564 - 35264808 35265376 0 2 228,340, 0,228, -,-, 774371 LINE CR1 854 chrZ 35269380 35270372 CR1-Y1_Aves 364 + 35269380 35270372 0 3 204,350,438, 0,204,554, +,+,+, 774373 LINE CR1 854 chrZ 35296539 35297016 CR1-C3 622 - 35296539 35297016 0 2 15,383, 0,94, -,-, 774391 LINE CR1 854 chrZ 35353253 35353746 CR1-C2 534 + 35353253 35353746 0 2 18,373, 0,120, +,+, 774435 LINE CR1 855 chrZ 35421505 35422375 CR1-C4 524 + 35421505 35422375 0 2 764,106, 0,764, +,+, 774487 LINE CR1 855 chrZ 35429850 35430816 CR1-C4 564 + 35429850 35430816 0 2 659,307, 0,659, +,+, 774494 LINE CR1 855 chrZ 35430929 35433598 GGERVL-B-int 317 - 35430929 35433598 0 3 1443,838,356, 0,1443,2313, -,-,-, 774495 LTR ERVL 855 chrZ 35448573 35449121 CR1-C4 601 + 35448573 35449121 0 2 444,104, 0,444, +,+, 774512 LINE CR1 855 chrZ 35462728 35464189 CR1-Y2_Aves 258 - 35462728 35464189 0 3 148,163,221, 0,1075,1240, -,-,-, 774527 LINE CR1 855 chrZ 35473233 35477020 CR1-Y2_Aves 203 + 35473233 35477020 0 2 651,455, 0,3332, +,+, 774539 LINE CR1 856 chrZ 35627747 35628149 Char12Mar1_GG 650 - 35627747 35628149 0 2 124,278, 0,124, -,-, 774620 DNA hAT-Charlie 856 chrZ 35629830 35632301 CR1-C4 577 + 35629830 35632301 0 2 1920,551, 0,1920, +,+, 774624 LINE CR1 857 chrZ 35658820 35659437 CR1-Y 170 + 35658820 35659437 0 2 153,238, 0,379, +,+, 774639 LINE CR1 857 chrZ 35674107 35674377 Mariner1b_GG 682 - 35674107 35674377 0 2 195,75, 0,195, -,-, 774652 DNA TcMar-Mariner 857 chrZ 35711361 35716711 CR1-C4 443 + 35711361 35716711 0 2 424,472, 0,4878, +,+, 774669 LINE CR1 857 chrZ 35712441 35715396 ENS3-int 120 - 35712441 35715396 0 3 1871,157,279, 0,1963,2676, -,-,-, 774672 LTR ERVL 858 chrZ 35784063 35785926 CR1-D 693 + 35784063 35785926 0 3 1473,101,67, 0,1473,1796, +,+,+, 774719 LINE CR1 858 chrZ 35811669 35813662 CR1-F 379 - 35811669 35813662 0 2 1686,130, 0,1863, -,-, 774740 LINE CR1 858 chrZ 35813356 35813535 Char12Mar1_GG 726 - 35813356 35813535 0 2 50,129, 0,50, -,-, 774741 DNA hAT-Charlie 858 chrZ 35834662 35835077 CR1-Y3 622 - 35834662 35835077 0 2 106,97, 0,318, -,-, 774754 LINE CR1 858 chrZ 35842023 35842967 Char12Mar1_GG 702 - 35842023 35842967 0 2 184,96, 0,848, -,-, 774760 DNA hAT-Charlie 858 chrZ 35867721 35870971 CR1-D 669 - 35867721 35870971 0 2 2429,821, 0,2429, -,-, 774778 LINE CR1 858 chrZ 35877567 35881653 CR1-C4 471 + 35877567 35881653 0 3 110,464,369, 0,1270,3717, +,+,+, 774787 LINE CR1 859 chrZ 35984463 35985502 Char12Mar1_GG 422 - 35984463 35985502 0 2 238,800, 0,239, -,-, 774880 DNA hAT-Charlie 859 chrZ 35988776 35991545 CR1-C3 595 + 35988776 35991545 0 2 489,2180, 0,589, +,+, 774885 LINE CR1 859 chrZ 35994715 35994792 (TTTAATT)n 366 + 35994715 35994792 0 2 15,10, 0,67, +,+, 774891 Simple_repeat Simple_repeat 859 chrZ 36030211 36030627 CR1-Y1_Aves 439 + 36030211 36030627 0 2 264,152, 0,264, +,+, 774928 LINE CR1 860 chrZ 36060037 36061706 CR1-Y2_Aves 275 - 36060037 36061706 0 2 241,388, 0,1281, -,-, 774958 LINE CR1 860 chrZ 36071046 36071141 A-rich 296 + 36071046 36071141 0 2 16,55, 0,40, +,+, 774968 Low_complexity Low_complexity 860 chrZ 36072278 36072534 TguLTR5e 403 + 36072278 36072534 0 2 108,148, 0,108, +,+, 774970 LTR ERVL 860 chrZ 36087890 36089727 CR1-C4 506 - 36087890 36089727 0 2 759,1078, 0,759, -,-, 774990 LINE CR1 860 chrZ 36100705 36103065 CR1-C3 475 + 36100705 36103065 0 2 463,867, 0,1493, +,+, 775003 LINE CR1 860 chrZ 36133744 36136358 CR1-D 421 - 36133744 36136358 0 2 838,1400, 0,1214, -,-, 775038 LINE CR1 860 chrZ 36136383 36137917 CR1-E 191 - 36136383 36137917 0 4 407,219,71,209, 0,999,1254,1325, -,-,-,-, 775040 LINE CR1 860 chrZ 36139137 36139958 CR1-X2 410 - 36139137 36139958 0 2 510,311, 0,510, -,-, 775045 LINE CR1 861 chrZ 36217019 36217548 ENS1B-LTR 922 + 36217019 36217548 0 2 226,303, 0,226, +,+, 775127 LTR ERVL 861 chrZ 36220022 36220321 GA-rich 364 + 36220022 36220321 0 2 146,119, 0,180, +,+, 775132 Low_complexity Low_complexity 861 chrZ 36220321 36220876 (GAAA)n 860 + 36220321 36220876 0 2 358,181, 0,374, +,+, 775133 Simple_repeat Simple_repeat 861 chrZ 36231082 36232187 CR1-H 766 - 36231082 36232187 0 2 445,132, 0,973, -,-, 775146 LINE CR1 861 chrZ 36260875 36261393 GGLTR3F2 634 - 36260875 36261393 0 2 256,234, 0,284, -,-, 775182 LTR ERVL 861 chrZ 36263097 36263775 CR1-C3 585 - 36263097 36263775 0 2 202,173, 0,505, -,-, 775187 LINE CR1 861 chrZ 36276062 36280095 Mariner1_GG 573 - 36276062 36280095 0 2 954,196, 0,3837, -,-, 775201 DNA TcMar-Mariner 861 chrZ 36278440 36278958 CR1-E 346 - 36278440 36278958 0 2 265,229, 0,289, -,-, 775205 LINE CR1 861 chrZ 36278959 36279903 CR1-H2 667 + 36278959 36279903 0 2 714,66, 0,878, +,+, 775206 LINE CR1 861 chrZ 36303889 36305740 CR1-Y4 437 - 36303889 36305740 0 3 1154,386,264, 0,1175,1587, -,-,-, 775225 LINE CR1 862 chrZ 36317228 36317515 GGERV10_LTR 518 + 36317228 36317515 0 2 71,113, 0,174, +,+, 775239 LTR ERVL 862 chrZ 36318029 36320994 CR1-G 473 - 36318029 36320994 0 2 535,2207, 0,758, -,-, 775241 LINE CR1 862 chrZ 36324680 36326020 GGLTR5A 440 - 36324680 36326020 0 2 170,144, 0,1196, -,-, 775248 LTR ERVL 862 chrZ 36335614 36336137 GGLTR5B 205 + 36335614 36336137 0 2 285,238, 0,285, +,+, 775268 LTR ERVL 862 chrZ 36336595 36337730 GGERVL-A-int 251 + 36336595 36337730 0 3 216,228,320, 0,569,815, +,+,+, 775270 LTR ERVL 862 chrZ 36337749 36338227 CR1-C2 839 + 36337749 36338227 0 2 47,431, 0,47, +,+, 775272 LINE CR1 862 chrZ 36351589 36353041 CR1-C4 410 + 36351589 36353041 0 2 216,1217, 0,235, +,+, 775289 LINE CR1 862 chrZ 36363137 36363601 CR1-X2 97 - 36363137 36363601 0 2 282,101, 0,363, -,-, 775296 LINE CR1 862 chrZ 36386056 36386121 (T)n 1000 + 36386056 36386121 0 2 23,24, 0,41, +,+, 775319 Simple_repeat Simple_repeat 862 chrZ 36412329 36412832 GGLTR7-int 734 + 36412329 36412832 0 2 158,337, 0,166, +,+, 775351 LTR ERV1 862 chrZ 36415471 36416535 CR1-C4 562 - 36415471 36416535 0 2 754,310, 0,754, -,-, 775355 LINE CR1 862 chrZ 36416768 36417420 CR1-Y1_Aves 357 + 36416768 36417420 0 2 548,96, 0,556, +,+, 775357 LINE CR1 862 chrZ 36427228 36427332 (A)n 1000 + 36427228 36427332 0 2 30,18, 0,86, +,+, 775365 Simple_repeat Simple_repeat 862 chrZ 36431580 36432048 CR1-Y1_Aves 254 - 36431580 36432048 0 2 252,216, 0,252, -,-, 775369 LINE CR1 863 chrZ 36452529 36455585 CR1-F 528 - 36452529 36455585 0 2 1234,1822, 0,1234, -,-, 775388 LINE CR1 863 chrZ 36456717 36459163 CR1-Y4 350 + 36456717 36459163 0 4 141,243,227,148, 0,693,1194,2298, +,+,+,+, 775391 LINE CR1 863 chrZ 36466837 36467217 CR1-D2 542 + 36466837 36467217 0 2 124,256, 0,124, +,+, 775403 LINE CR1 863 chrZ 36480557 36481829 CR1-Y4 564 - 36480557 36481829 0 2 313,162, 0,1110, -,-, 775417 LINE CR1 863 chrZ 36486630 36487399 CR1-Y1_Aves 410 + 36486630 36487399 0 2 463,306, 0,463, +,+, 775425 LINE CR1 863 chrZ 36503835 36504624 CR1-D 445 + 36503835 36504624 0 2 214,575, 0,214, +,+, 775444 LINE CR1 863 chrZ 36504695 36506629 CR1-C4 461 + 36504695 36506629 0 2 138,1128, 0,806, +,+, 775445 LINE CR1 863 chrZ 36504829 36505503 CR1-F2 557 - 36504829 36505503 0 2 55,609, 0,65, -,-, 775446 LINE CR1 863 chrZ 36506696 36507447 GGERVL-C-int 356 + 36506696 36507447 0 2 50,670, 0,81, +,+, 775448 LTR ERVL 863 chrZ 36507489 36507977 TguLTR5e 228 + 36507489 36507977 0 2 246,148, 0,340, +,+, 775449 LTR ERVL 864 chrZ 36586192 36586778 CR1-C4 616 + 36586192 36586778 0 2 73,513, 0,73, +,+, 775501 LINE CR1 865 chrZ 36716404 36716907 GGLTR5A 385 + 36716404 36716907 0 2 258,152, 0,351, +,+, 775606 LTR ERVL 865 chrZ 36765634 36765674 (ACAA)n 634 + 36765634 36765674 0 2 6,10, 0,30, +,+, 775635 Simple_repeat Simple_repeat 865 chrZ 36777389 36778480 CR1-X 483 + 36777389 36778480 0 2 694,397, 0,694, +,+, 775647 LINE CR1 108 chrZ 36824207 36832506 Char12Mar1_GG 612 - 36824207 36832506 0 2 491,331, 0,7968, -,-, 775674 DNA hAT-Charlie 866 chrZ 36853145 36855580 CR1-H 833 - 36853145 36855580 0 3 727,657,1044, 0,734,1391, -,-,-, 775699 LINE CR1 866 chrZ 36871335 36872576 CR1-Y1_Aves 468 + 36871335 36872576 0 2 248,378, 0,863, +,+, 775706 LINE CR1 866 chrZ 36876813 36876991 CR1-L3B_Croc 395 + 36876813 36876991 0 2 63,99, 0,79, +,+, 775713 LINE CR1 866 chrZ 36924432 36925059 CR1-C2 853 + 36924432 36925059 0 2 366,261, 0,366, +,+, 775740 LINE CR1 866 chrZ 36925586 36926305 CR1-D2 447 - 36925586 36926305 0 2 503,208, 0,511, -,-, 775742 LINE CR1 866 chrZ 36947690 36948296 GGLTR3C2 614 - 36947690 36948296 0 2 119,430, 0,176, -,-, 775761 LTR ERVL 867 chrZ 37030756 37032448 CR1-Y3 605 - 37030756 37032448 0 2 735,957, 0,735, -,-, 775818 LINE CR1 867 chrZ 37048537 37049026 TguLTR5e 398 + 37048537 37049026 0 2 178,141, 0,348, +,+, 775838 LTR ERVL 867 chrZ 37055035 37055100 (TTCT)n 354 + 37055035 37055100 0 2 12,21, 0,44, +,+, 775843 Simple_repeat Simple_repeat 867 chrZ 37086711 37087120 CR1-E 496 - 37086711 37087120 0 2 18,386, 0,23, -,-, 775872 LINE CR1 868 chrZ 37122723 37123507 CR1-D 700 - 37122723 37123507 0 2 441,343, 0,441, -,-, 775889 LINE CR1 868 chrZ 37125995 37127131 CR1-C4 654 + 37125995 37127131 0 2 775,342, 0,794, +,+, 775892 LINE CR1 868 chrZ 37153522 37154018 TguLTR5e 244 + 37153522 37154018 0 2 269,191, 0,305, +,+, 775916 LTR ERVL 868 chrZ 37190532 37192192 LSU-rRNA_Hsa 458 - 37190532 37192192 0 2 795,148, 0,1512, -,-, 775944 rRNA rRNA 868 chrZ 37199236 37199823 Charlie12_GGa 556 - 37199236 37199823 0 2 475,112, 0,475, -,-, 775950 DNA hAT-Charlie 869 chrZ 37229714 37230769 CR1-D2 592 + 37229714 37230769 0 2 354,701, 0,354, +,+, 775967 LINE CR1 869 chrZ 37233699 37233920 Char12Mar1_GG 614 - 37233699 37233920 0 2 114,107, 0,114, -,-, 775971 DNA hAT-Charlie 869 chrZ 37236748 37240103 CR1-C4 537 - 37236748 37240103 0 3 108,631,996, 0,1728,2359, -,-,-, 775975 LINE CR1 869 chrZ 37236834 37238476 CR1-F 616 + 37236834 37238476 0 2 337,1305, 0,337, +,+, 775976 LINE CR1 869 chrZ 37280923 37285875 CR1-Y4 644 + 37280923 37285875 0 3 499,188,800, 0,1028,4152, +,+,+, 776013 LINE CR1 869 chrZ 37302470 37302800 TguLTR5d 382 - 37302470 37302800 0 2 100,73, 0,257, -,-, 776029 LTR ERVL 869 chrZ 37328428 37329389 CR1-D 637 + 37328428 37329389 0 2 280,71, 0,890, +,+, 776045 LINE CR1 869 chrZ 37332097 37332484 TguLTR5e 288 - 37332097 37332484 0 2 16,261, 0,126, -,-, 776050 LTR ERVL 870 chrZ 37370140 37370516 CR1-Y4 320 + 37370140 37370516 0 2 106,155, 0,221, +,+, 776081 LINE CR1 870 chrZ 37473786 37474840 CR1-F2 346 + 37473786 37474840 0 3 269,564,221, 0,269,833, +,+,+, 776156 LINE CR1 870 chrZ 37485644 37486223 CR1-F2 383 + 37485644 37486223 0 2 444,135, 0,444, +,+, 776161 LINE CR1 871 chrZ 37531010 37533538 CR1-D 706 - 37531010 37533538 0 2 1039,603, 0,1925, -,-, 776187 LINE CR1 871 chrZ 37588702 37589161 CR1-X2 470 + 37588702 37589161 0 2 197,262, 0,197, +,+, 776227 LINE CR1 871 chrZ 37591081 37592809 CR1-D2 587 - 37591081 37592809 0 2 677,603, 0,1125, -,-, 776228 LINE CR1 872 chrZ 37667162 37672763 GGLTR7-int 374 - 37667162 37672763 0 5 285,275,2667,1731,325, 0,468,868,3543,5276, -,-,-,-,-, 776270 LTR ERV1 872 chrZ 37674609 37676403 CR1-C4 316 - 37674609 37676403 0 2 101,493, 0,1301, -,-, 776274 LINE CR1 872 chrZ 37674688 37675896 CR1-F 312 - 37674688 37675896 0 2 23,1082, 0,126, -,-, 776275 LINE CR1 872 chrZ 37687117 37687477 CR1-C4 553 - 37687117 37687477 0 2 63,177, 0,183, -,-, 776285 LINE CR1 872 chrZ 37688566 37689801 CR1-Y1_Aves 412 + 37688566 37689801 0 2 895,333, 0,902, +,+, 776287 LINE CR1 872 chrZ 37711485 37712391 CR1-C4 473 + 37711485 37712391 0 2 705,201, 0,705, +,+, 776305 LINE CR1 872 chrZ 37725069 37726222 CR1-D 317 + 37725069 37726222 0 3 99,935,110, 0,102,1043, +,+,+, 776314 LINE CR1 872 chrZ 37741217 37744111 CR1-C4 554 - 37741217 37744111 0 2 166,174, 0,2720, -,-, 776325 LINE CR1 872 chrZ 37742081 37743917 CR1-Y4 485 + 37742081 37743917 0 3 1238,214,382, 0,1240,1454, +,+,+, 776327 LINE CR1 873 chrZ 37769110 37769235 (GCGCC)n 334 + 37769110 37769235 0 2 50,18, 0,107, +,+, 776345 Simple_repeat Simple_repeat 873 chrZ 37792046 37796050 Char12Mar1_GG 614 - 37792046 37796050 0 2 77,110, 0,3894, -,-, 776369 DNA hAT-Charlie 873 chrZ 37798327 37800500 CR1-F2 317 - 37798327 37800500 0 3 234,69,385, 0,1713,1788, -,-,-, 776374 LINE CR1 873 chrZ 37798638 37800041 CR1-D 544 + 37798638 37800041 0 2 756,640, 0,763, +,+, 776376 LINE CR1 874 chrZ 37916485 37918126 GGLTR5B 654 + 37916485 37918126 0 2 439,34, 0,1607, +,+, 776449 LTR ERVL 874 chrZ 37923380 37924309 CR1-X 86 + 37923380 37924309 0 2 114,376, 0,553, +,+, 776454 LINE CR1 874 chrZ 37929248 37931468 CR1-G 829 + 37929248 37931468 0 2 1144,746, 0,1474, +,+, 776463 LINE CR1 874 chrZ 37930392 37930721 GGERV10_LTR 791 + 37930392 37930721 0 2 74,159, 0,170, +,+, 776464 LTR ERVL 874 chrZ 37940344 37941288 CR1-Y1_Aves 292 + 37940344 37941288 0 2 251,660, 0,284, +,+, 776472 LINE CR1 875 chrZ 38040584 38040993 CR1-E 750 - 38040584 38040993 0 2 136,273, 0,136, -,-, 776536 LINE CR1 875 chrZ 38110546 38113363 CR1-C 695 - 38110546 38113363 0 2 1229,1242, 0,1575, -,-, 776592 LINE CR1 875 chrZ 38125093 38126508 CR1-X2 385 + 38125093 38126508 0 2 237,553, 0,862, +,+, 776604 LINE CR1 876 chrZ 38171553 38172174 GGLTR5B 266 + 38171553 38172174 0 2 373,169, 0,452, +,+, 776638 LTR ERVL 876 chrZ 38205832 38207019 CR1-Y3 568 + 38205832 38207019 0 2 939,242, 0,945, +,+, 776666 LINE CR1 876 chrZ 38220662 38224998 CR1-Y 776 + 38220662 38224998 0 2 607,601, 0,3735, +,+, 776680 LINE CR1 876 chrZ 38270617 38272313 CR1-X2 411 + 38270617 38272313 0 2 1008,682, 0,1014, +,+, 776708 LINE CR1 877 chrZ 38284057 38284265 CR1-L3B_Croc 367 + 38284057 38284265 0 2 81,110, 0,98, +,+, 776720 LINE CR1 877 chrZ 38324647 38325398 CR1-E 333 + 38324647 38325398 0 2 292,458, 0,293, +,+, 776749 LINE CR1 877 chrZ 38353101 38353868 Char12Mar1_GG 661 - 38353101 38353868 0 2 559,33, 0,734, -,-, 776768 DNA hAT-Charlie 877 chrZ 38360250 38360600 GGLTR8A 368 + 38360250 38360600 0 2 81,269, 0,81, +,+, 776777 LTR ERVL 878 chrZ 38410042 38414645 CR1-C4 549 - 38410042 38414645 0 2 527,172, 0,4431, -,-, 776822 LINE CR1 878 chrZ 38418944 38419433 CR1-D 732 - 38418944 38419433 0 2 249,238, 0,251, -,-, 776828 LINE CR1 878 chrZ 38457789 38458363 CR1-D2 562 + 38457789 38458363 0 2 194,380, 0,194, +,+, 776859 LINE CR1 879 chrZ 38603034 38604315 CR1-Y 500 - 38603034 38604315 0 2 1140,139, 0,1142, -,-, 776952 LINE CR1 879 chrZ 38617247 38617293 (TTTCTC)n 448 + 38617247 38617293 0 2 9,14, 0,32, +,+, 776963 Simple_repeat Simple_repeat 879 chrZ 38640060 38643311 CR1-C2 312 + 38640060 38643311 0 2 258,354, 0,2897, +,+, 776985 LINE CR1 880 chrZ 38679011 38679070 (TTTATT)n 380 + 38679011 38679070 0 2 6,14, 0,45, +,+, 777019 Simple_repeat Simple_repeat 880 chrZ 38691476 38694405 CR1-Y4 393 + 38691476 38694405 0 2 117,843, 0,2086, +,+, 777031 LINE CR1 880 chrZ 38717886 38721145 CR1-D2 490 + 38717886 38721145 0 3 20,614,306, 0,2338,2953, +,+,+, 777061 LINE CR1 880 chrZ 38734007 38734858 CR1-F2 536 - 38734007 38734858 0 2 674,162, 0,689, -,-, 777081 LINE CR1 880 chrZ 38742082 38745790 CR1-C2 624 + 38742082 38745790 0 2 182,667, 0,3041, +,+, 777086 LINE CR1 880 chrZ 38765223 38766503 GGLTR8B 352 - 38765223 38766503 0 2 185,239, 0,1041, -,-, 777110 LTR ERVL 880 chrZ 38768623 38774312 CR1-F 447 + 38768623 38774312 0 3 367,424,3052, 0,367,2637, +,+,+, 777114 LINE CR1 880 chrZ 38774310 38777725 CR1-C2 791 - 38774310 38777725 0 2 313,842, 0,2573, -,-, 777117 LINE CR1 881 chrZ 38801959 38810880 CR1-C4 454 - 38801959 38810880 0 4 556,617,1486,141, 0,556,2672,8780, -,-,-,-, 777143 LINE CR1 881 chrZ 38803136 38804436 Charlie12_GG 498 - 38803136 38804436 0 3 944,48,66, 0,1052,1234, -,-,-, 777144 DNA hAT-Charlie 881 chrZ 38806231 38810739 GGERVL-A-int 681 - 38806231 38810739 0 4 1163,2609,197,506, 0,1163,3804,4002, -,-,-,-, 777148 LTR ERVL 881 chrZ 38812633 38818163 CR1-H 737 - 38812633 38818163 0 2 515,578, 0,4952, -,-, 777152 LINE CR1 881 chrZ 38813143 38817582 CR1-B 899 - 38813143 38817582 0 2 915,1348, 0,3091, -,-, 777153 LINE CR1 881 chrZ 38827805 38829874 CR1-X 376 - 38827805 38829874 0 2 1707,331, 0,1738, -,-, 777163 LINE CR1 881 chrZ 38836577 38837127 Char12Mar1_GG 418 - 38836577 38837127 0 2 295,230, 0,320, -,-, 777175 DNA hAT-Charlie 881 chrZ 38855412 38856199 CR1-Y4 445 - 38855412 38856199 0 2 437,180, 0,607, -,-, 777200 LINE CR1 881 chrZ 38859055 38864410 GGERVL18-int 403 + 38859055 38864410 0 5 778,551,1365,526,303, 0,896,2619,4526,5052, +,+,+,+,+, 777206 LTR ERVL 881 chrZ 38864784 38864914 CR1-H 551 + 38864784 38864914 0 2 63,64, 0,66, +,+, 777210 LINE CR1 881 chrZ 38877944 38879325 GGERVL-B-int 270 + 38877944 38879325 0 2 787,259, 0,1122, +,+, 777223 LTR ERVL 881 chrZ 38886267 38886709 Char12Mar1_GG 645 - 38886267 38886709 0 2 262,180, 0,262, -,-, 777231 DNA hAT-Charlie 881 chrZ 38913908 38915868 CR1-C2 543 - 38913908 38915868 0 2 279,41, 0,1919, -,-, 777265 LINE CR1 881 chrZ 38916151 38919612 GGLTR7-int 595 - 38916151 38919612 0 3 591,358,2509, 0,591,952, -,-,-, 777271 LTR ERV1 882 chrZ 38931755 38933256 CR1-Y 766 - 38931755 38933256 0 2 138,115, 0,1386, -,-, 777292 LINE CR1 882 chrZ 38931893 38933141 GGLTR3A 709 - 38931893 38933141 0 2 523,63, 0,1185, -,-, 777293 LTR ERVL 882 chrZ 38941561 38946479 CR1-C3 613 - 38941561 38946479 0 3 1160,565,888, 0,1726,4030, -,-,-, 777309 LINE CR1 882 chrZ 38944977 38945591 ENS1B-LTR 228 + 38944977 38945591 0 2 189,413, 0,201, +,+, 777312 LTR ERVL 882 chrZ 38963696 38964293 Mariner1b_GG 568 + 38963696 38964293 0 2 465,95, 0,502, +,+, 777338 DNA TcMar-Mariner 882 chrZ 38969440 38970128 CR1-Y4 497 - 38969440 38970128 0 2 188,369, 0,319, -,-, 777349 LINE CR1 882 chrZ 38970711 38974054 CR1-C 709 + 38970711 38974054 0 2 346,2267, 0,1076, +,+, 777353 LINE CR1 882 chrZ 38976857 38978587 Mariner1_GG 486 - 38976857 38978587 0 2 294,974, 0,756, -,-, 777358 DNA TcMar-Mariner 882 chrZ 38981150 38984286 CR1-C3 542 - 38981150 38984286 0 2 1559,968, 0,2168, -,-, 777362 LINE CR1 882 chrZ 38986744 38988283 CR1-F 891 + 38986744 38988283 0 2 106,802, 0,737, +,+, 777366 LINE CR1 882 chrZ 38995300 38996452 CR1-F2 238 - 38995300 38996452 0 2 686,466, 0,686, -,-, 777374 LINE CR1 882 chrZ 39000710 39001051 Char12Mar1_GG 422 + 39000710 39001051 0 2 14,30, 0,311, +,+, 777384 DNA hAT-Charlie 882 chrZ 39028517 39029442 CR1-F 901 + 39028517 39029442 0 2 320,605, 0,320, +,+, 777412 LINE CR1 882 chrZ 39030743 39037901 CR1-D 556 + 39030743 39037901 0 2 493,1972, 0,5186, +,+, 777415 LINE CR1 882 chrZ 39031238 39035929 ENS1-LTR 927 - 39031238 39035929 0 3 932,2827,932, 0,932,3759, -,-,-, 777416 LTR ERVL 882 chrZ 39039236 39040604 CR1-Y3 446 + 39039236 39040604 0 2 273,89, 0,1279, +,+, 777418 LINE CR1 882 chrZ 39047210 39047975 Char12Mar1_GG 571 - 39047210 39047975 0 2 448,68, 0,697, -,-, 777426 DNA hAT-Charlie 882 chrZ 39052392 39053024 GGLTR5A 228 + 39052392 39053024 0 2 370,173, 0,459, +,+, 777432 LTR ERVL 883 chrZ 39060981 39062726 GGLTR5B 448 + 39060981 39062726 0 3 143,144,179, 0,505,1566, +,+,+, 777440 LTR ERVL 883 chrZ 39067426 39070734 CR1-B2 871 - 39067426 39070734 0 2 453,2008, 0,1300, -,-, 777450 LINE CR1 883 chrZ 39099495 39100037 CR1-D 631 - 39099495 39100037 0 2 308,234, 0,308, -,-, 777474 LINE CR1 883 chrZ 39100034 39102136 CR1-G 394 - 39100034 39102136 0 2 1473,629, 0,1473, -,-, 777475 LINE CR1 883 chrZ 39106950 39108240 CR1-C2 480 - 39106950 39108240 0 2 168,1122, 0,168, -,-, 777482 LINE CR1 883 chrZ 39123589 39124974 CR1-E 407 + 39123589 39124974 0 2 1076,243, 0,1142, +,+, 777493 LINE CR1 883 chrZ 39125050 39126734 CR1-Y3 740 - 39125050 39126734 0 2 158,467, 0,1217, -,-, 777494 LINE CR1 883 chrZ 39157826 39159026 CR1-X1 487 + 39157826 39159026 0 2 368,819, 0,381, +,+, 777523 LINE CR1 884 chrZ 39192882 39193212 CR1-Y1_Aves 550 - 39192882 39193212 0 2 116,206, 0,124, -,-, 777541 LINE CR1 884 chrZ 39193348 39194467 CR1-C4 476 + 39193348 39194467 0 2 468,646, 0,473, +,+, 777543 LINE CR1 884 chrZ 39219298 39220597 CR1-F2 604 + 39219298 39220597 0 2 143,990, 0,309, +,+, 777561 LINE CR1 884 chrZ 39271067 39271586 CR1-D2 548 - 39271067 39271586 0 2 196,292, 0,227, -,-, 777600 LINE CR1 884 chrZ 39271772 39274448 CR1-C4 419 + 39271772 39274448 0 2 159,1738, 0,938, +,+, 777602 LINE CR1 885 chrZ 39335431 39339331 CR1-H 803 + 39335431 39339331 0 3 1692,1240,606, 0,2054,3294, +,+,+, 777659 LINE CR1 885 chrZ 39385139 39385646 GGLTR11-int 554 + 39385139 39385646 0 2 217,227, 0,280, +,+, 777706 LTR ERV1 885 chrZ 39385824 39387081 CR1-C 830 - 39385824 39387081 0 2 452,805, 0,452, -,-, 777708 LINE CR1 885 chrZ 39411477 39412721 GGLTR3C2 598 - 39411477 39412721 0 2 200,390, 0,854, -,-, 777725 LTR ERVL 885 chrZ 39428376 39429582 CR1-Y3 579 + 39428376 39429582 0 2 169,829, 0,377, +,+, 777739 LINE CR1 885 chrZ 39434702 39435267 GGLTR3B2 498 + 39434702 39435267 0 2 333,200, 0,365, +,+, 777744 LTR ERVL 886 chrZ 39479098 39480610 CR1-Y1_Aves 335 - 39479098 39480610 0 2 238,339, 0,1173, -,-, 777794 LINE CR1 886 chrZ 39479335 39480258 CR1-C4 449 - 39479335 39480258 0 2 616,306, 0,617, -,-, 777795 LINE CR1 886 chrZ 39501374 39502624 CR1-E 635 - 39501374 39502624 0 3 675,170,368, 0,712,882, -,-,-, 777816 LINE CR1 886 chrZ 39504012 39506475 CR1-C4 481 - 39504012 39506475 0 3 375,272,874, 0,1317,1589, -,-,-, 777818 LINE CR1 886 chrZ 39504384 39505329 GGLTR3C1 377 - 39504384 39505329 0 2 395,143, 0,802, -,-, 777819 LTR ERVL 886 chrZ 39504943 39505191 CR1-H2 822 + 39504943 39505191 0 2 56,186, 0,62, +,+, 777822 LINE CR1 886 chrZ 39541147 39541439 ENS1B-LTR 706 - 39541147 39541439 0 2 213,62, 0,230, -,-, 777844 LTR ERVL 886 chrZ 39541482 39542362 GGLTR12B 607 - 39541482 39542362 0 2 214,649, 0,231, -,-, 777847 LTR ERVL 886 chrZ 39543327 39543790 CR1-Y2_Aves 177 + 39543327 39543790 0 2 117,148, 0,315, +,+, 777852 LINE CR1 886 chrZ 39560531 39560856 TguLTR5e 419 - 39560531 39560856 0 2 197,128, 0,197, -,-, 777868 LTR ERVL 886 chrZ 39563935 39564966 CR1-F2 539 - 39563935 39564966 0 2 73,654, 0,377, -,-, 777870 LINE CR1 886 chrZ 39568334 39568427 A-rich 384 + 39568334 39568427 0 2 53,13, 0,80, +,+, 777873 Low_complexity Low_complexity 886 chrZ 39575317 39575424 (GTTTG)n 424 + 39575317 39575424 0 2 22,41, 0,66, +,+, 777884 Simple_repeat Simple_repeat 887 chrZ 39588351 39589329 CR1-C2 588 - 39588351 39589329 0 2 334,113, 0,865, -,-, 777894 LINE CR1 887 chrZ 39612720 39614498 Char12Mar1_GG 502 - 39612720 39614498 0 2 1021,293, 0,1485, -,-, 777910 DNA hAT-Charlie 887 chrZ 39613767 39614209 CR1-D 396 + 39613767 39614209 0 2 169,262, 0,180, +,+, 777911 LINE CR1 887 chrZ 39622682 39624689 CR1-C4 514 + 39622682 39624689 0 2 1225,782, 0,1225, +,+, 777918 LINE CR1 887 chrZ 39626656 39629037 CR1-Y4 441 - 39626656 39629037 0 3 210,95,909, 0,210,1472, -,-,-, 777921 LINE CR1 887 chrZ 39627400 39628127 GGLTR12C 486 + 39627400 39628127 0 2 89,252, 0,475, +,+, 777923 LTR ERVL 887 chrZ 39632711 39634952 CR1-F2 576 - 39632711 39634952 0 2 113,2127, 0,114, -,-, 777928 LINE CR1 887 chrZ 39637163 39641087 CR1-C4 530 + 39637163 39641087 0 4 83,195,830,47, 0,83,830,3877, +,+,+,+, 777930 LINE CR1 887 chrZ 39641090 39641988 CR1-C4 462 - 39641090 39641988 0 2 566,329, 0,569, -,-, 777935 LINE CR1 887 chrZ 39642823 39644096 CR1-E 347 - 39642823 39644096 0 2 403,343, 0,930, -,-, 777936 LINE CR1 887 chrZ 39643229 39643776 CR1-F2 605 + 39643229 39643776 0 2 466,81, 0,466, +,+, 777937 LINE CR1 887 chrZ 39677753 39680441 CR1-C4 549 + 39677753 39680441 0 2 2309,379, 0,2309, +,+, 777970 LINE CR1 887 chrZ 39685065 39687110 CR1-Y2 638 + 39685065 39687110 0 2 1440,605, 0,1440, +,+, 777974 LINE CR1 887 chrZ 39700891 39701355 GGLTR12C 329 - 39700891 39701355 0 2 228,183, 0,281, -,-, 777984 LTR ERVL 887 chrZ 39711427 39712267 CR1-C3 555 + 39711427 39712267 0 2 415,307, 0,533, +,+, 777995 LINE CR1 888 chrZ 39721967 39723012 CR1-X2 485 + 39721967 39723012 0 2 206,174, 0,871, +,+, 778005 LINE CR1 888 chrZ 39722173 39722678 TguLTR5e 397 + 39722173 39722678 0 2 141,248, 0,257, +,+, 778006 LTR ERVL 888 chrZ 39731656 39732720 CR1-X1 562 + 39731656 39732720 0 2 562,367, 0,697, +,+, 778014 LINE CR1 888 chrZ 39750190 39751364 Char12Mar1_GG 571 - 39750190 39751364 0 2 475,697, 0,477, -,-, 778027 DNA hAT-Charlie 888 chrZ 39761129 39763943 CR1-D 681 + 39761129 39763943 0 2 1591,1223, 0,1591, +,+, 778042 LINE CR1 888 chrZ 39774859 39776661 CR1-C3 551 + 39774859 39776661 0 3 241,91,746, 0,965,1056, +,+,+, 778050 LINE CR1 888 chrZ 39798389 39799312 CR1-F2 262 + 39798389 39799312 0 2 288,635, 0,288, +,+, 778062 LINE CR1 888 chrZ 39801817 39802570 CR1-E 214 + 39801817 39802570 0 2 463,232, 0,521, +,+, 778064 LINE CR1 889 chrZ 39846653 39848083 CR1-C4 589 + 39846653 39848083 0 2 52,546, 0,884, +,+, 778092 LINE CR1 889 chrZ 39857785 39859010 CR1-X1 551 - 39857785 39859010 0 2 693,515, 0,710, -,-, 778096 LINE CR1 889 chrZ 39882827 39883298 CR1-X2 604 - 39882827 39883298 0 2 171,237, 0,234, -,-, 778107 LINE CR1 889 chrZ 39936552 39936929 CR1-D 497 + 39936552 39936929 0 2 282,93, 0,284, +,+, 778149 LINE CR1 889 chrZ 39964139 39966592 CR1-F2 813 + 39964139 39966592 0 2 1806,647, 0,1806, +,+, 778166 LINE CR1 890 chrZ 40002347 40003024 CR1-H 783 + 40002347 40003024 0 2 458,219, 0,458, +,+, 778194 LINE CR1 890 chrZ 40024757 40026034 Charlie12_GG 468 - 40024757 40026034 0 2 1151,114, 0,1163, -,-, 778214 DNA hAT-Charlie 890 chrZ 40038661 40039034 CR1-H 500 - 40038661 40039034 0 2 64,199, 0,174, -,-, 778222 LINE CR1 890 chrZ 40056823 40058129 CR1-Y1_Aves 391 - 40056823 40058129 0 2 499,184, 0,1122, -,-, 778238 LINE CR1 890 chrZ 40079834 40080293 GGLTR8B 320 + 40079834 40080293 0 2 379,55, 0,404, +,+, 778258 LTR ERVL 891 chrZ 40112373 40112744 GGLTR5A 327 - 40112373 40112744 0 2 181,190, 0,181, -,-, 778275 LTR ERVL 891 chrZ 40120916 40121011 (ATGT)n 310 + 40120916 40121011 0 2 12,35, 0,60, +,+, 778281 Simple_repeat Simple_repeat 891 chrZ 40124214 40127057 CR1-Y2_Aves 67 + 40124214 40127057 0 3 589,793,587, 0,1212,2256, +,+,+, 778286 LINE CR1 891 chrZ 40131412 40132202 CR1-X2 540 + 40131412 40132202 0 2 84,706, 0,84, +,+, 778289 LINE CR1 891 chrZ 40136986 40137519 CR1-Y2_Aves 382 + 40136986 40137519 0 2 213,223, 0,310, +,+, 778291 LINE CR1 891 chrZ 40169149 40169226 (T)n 823 + 40169149 40169226 0 2 26,21, 0,56, +,+, 778318 Simple_repeat Simple_repeat 891 chrZ 40223162 40225284 CR1-X2 271 + 40223162 40225284 0 2 703,478, 0,1644, +,+, 778359 LINE CR1 892 chrZ 40248281 40249545 CR1-C4 524 - 40248281 40249545 0 2 563,263, 0,1001, -,-, 778373 LINE CR1 892 chrZ 40259104 40260456 CR1-Y2_Aves 95 - 40259104 40260456 0 2 320,995, 0,357, -,-, 778378 LINE CR1 892 chrZ 40358759 40359949 CR1-Y4 374 - 40358759 40359949 0 2 292,898, 0,292, -,-, 778434 LINE CR1 893 chrZ 40433554 40435107 CR1-Y4 506 + 40433554 40435107 0 2 1450,103, 0,1450, +,+, 778488 LINE CR1 894 chrZ 40620364 40620973 CR1-D2 556 - 40620364 40620973 0 2 520,89, 0,520, -,-, 778622 LINE CR1 895 chrZ 40640630 40641498 Charlie12_GGa 378 - 40640630 40641498 0 2 176,667, 0,201, -,-, 778637 DNA hAT-Charlie 895 chrZ 40641538 40642183 CR1-D 582 - 40641538 40642183 0 2 324,321, 0,324, -,-, 778639 LINE CR1 895 chrZ 40643273 40645025 CR1-C3 672 - 40643273 40645025 0 2 586,536, 0,1216, -,-, 778642 LINE CR1 895 chrZ 40643859 40644489 GGLTR3C2 530 + 40643859 40644489 0 2 51,524, 0,106, +,+, 778643 LTR ERVL 895 chrZ 40650375 40650832 CR1-D 761 - 40650375 40650832 0 2 111,235, 0,222, -,-, 778652 LINE CR1 895 chrZ 40672509 40672996 CR1-Y1_Aves 579 - 40672509 40672996 0 2 212,59, 0,428, -,-, 778667 LINE CR1 895 chrZ 40682491 40684444 CR1-C4 483 - 40682491 40684444 0 2 563,1390, 0,563, -,-, 778675 LINE CR1 895 chrZ 40684806 40685587 CR1-H 245 - 40684806 40685587 0 2 532,247, 0,534, -,-, 778676 LINE CR1 895 chrZ 40719785 40721570 CR1-Y4 575 - 40719785 40721570 0 2 471,517, 0,1268, -,-, 778697 LINE CR1 111 chrZ 40761980 40763644 GGERVL-C-int 416 - 40761980 40763644 0 3 105,261,213, 0,105,1451, -,-,-, 778732 LTR ERVL 896 chrZ 40787237 40788525 CR1-C4 145 + 40787237 40788525 0 3 19,26,636, 0,384,652, +,+,+, 778745 LINE CR1 896 chrZ 40788529 40790008 CR1-Y4 503 + 40788529 40790008 0 2 1201,161, 0,1318, +,+, 778748 LINE CR1 896 chrZ 40794668 40799096 CR1-F2 567 - 40794668 40799096 0 2 60,143, 0,4285, -,-, 778754 LINE CR1 897 chrZ 40929402 40931850 GGLTR5B 665 + 40929402 40931850 0 2 436,98, 0,2350, +,+, 778848 LTR ERVL 898 chrZ 41042427 41043692 Mariner1_GG 590 + 41042427 41043692 0 2 1082,146, 0,1119, +,+, 778931 DNA TcMar-Mariner 898 chrZ 41053737 41054743 CR1-C4 542 + 41053737 41054743 0 2 462,199, 0,807, +,+, 778939 LINE CR1 898 chrZ 41066718 41069323 CR1-D 728 + 41066718 41069323 0 2 1225,76, 0,2529, +,+, 778953 LINE CR1 898 chrZ 41083395 41083849 UCON64 328 - 41083395 41083849 0 2 131,106, 0,348, -,-, 778962 Unknown Unknown 898 chrZ 41114072 41116385 CR1-D 623 + 41114072 41116385 0 2 638,117, 0,2196, +,+, 778987 LINE CR1 899 chrZ 41191748 41192760 CR1-Y2_Aves 201 + 41191748 41192760 0 2 655,357, 0,655, +,+, 779040 LINE CR1 899 chrZ 41231957 41232067 (A)n 863 + 41231957 41232067 0 2 25,25, 0,85, +,+, 779057 Simple_repeat Simple_repeat 899 chrZ 41249915 41249962 (GTTTGT)n 432 + 41249915 41249962 0 2 9,17, 0,30, +,+, 779070 Simple_repeat Simple_repeat 899 chrZ 41272805 41274582 GGERVL18-int 534 + 41272805 41274582 0 2 495,1282, 0,495, +,+, 779089 LTR ERVL 900 chrZ 41322524 41323950 CR1-C4 434 + 41322524 41323950 0 2 359,603, 0,823, +,+, 779114 LINE CR1 900 chrZ 41329116 41331655 CR1-D2 534 + 41329116 41331655 0 2 1120,509, 0,2030, +,+, 779119 LINE CR1 900 chrZ 41337020 41339440 CR1-H 232 - 41337020 41339440 0 2 105,446, 0,1974, -,-, 779124 LINE CR1 901 chrZ 41465743 41466945 GGERVL-C-int 164 + 41465743 41466945 0 2 157,341, 0,861, +,+, 779187 LTR ERVL 901 chrZ 41476593 41477244 Char12Mar1_GG 517 - 41476593 41477244 0 2 165,368, 0,283, -,-, 779195 DNA hAT-Charlie 901 chrZ 41480653 41485348 ENS3-int 276 + 41480653 41485348 0 4 320,411,2431,1470, 0,367,794,3225, +,+,+,+, 779201 LTR ERVL 901 chrZ 41487343 41488709 Char12Mar1_GG 195 - 41487343 41488709 0 2 298,191, 0,1175, -,-, 779204 DNA hAT-Charlie 901 chrZ 41508658 41510293 CR1-C4 232 + 41508658 41510293 0 2 973,313, 0,1322, +,+, 779219 LINE CR1 902 chrZ 41563087 41564756 CR1-C4 516 - 41563087 41564756 0 2 189,373, 0,1296, -,-, 779260 LINE CR1 902 chrZ 41563282 41564380 CR1-B2 689 - 41563282 41564380 0 2 477,585, 0,513, -,-, 779261 LINE CR1 902 chrZ 41570660 41571965 GGLTR8A 372 - 41570660 41571965 0 2 103,572, 0,733, -,-, 779266 LTR ERVL 902 chrZ 41635920 41637803 CR1-F2 710 - 41635920 41637803 0 2 599,177, 0,1706, -,-, 779318 LINE CR1 902 chrZ 41667973 41668215 CR1-Y4 642 + 41667973 41668215 0 3 54,86,44, 0,112,198, +,+,+, 779339 LINE CR1 902 chrZ 41671943 41673531 CR1-Y1_Aves 418 + 41671943 41673531 0 2 674,325, 0,1263, +,+, 779343 LINE CR1 903 chrZ 41688820 41690105 CR1-E 363 - 41688820 41690105 0 2 605,671, 0,614, -,-, 779353 LINE CR1 903 chrZ 41696200 41698057 CR1-F2 659 + 41696200 41698057 0 2 1026,831, 0,1026, +,+, 779359 LINE CR1 903 chrZ 41713777 41714263 GGLTR5A 353 - 41713777 41714263 0 2 105,350, 0,136, -,-, 779369 LTR ERVL 904 chrZ 41823301 41823365 A-rich 338 + 41823301 41823365 0 2 16,15, 0,49, +,+, 779432 Low_complexity Low_complexity 904 chrZ 41835848 41835921 (C)n 913 + 41835848 41835921 0 2 25,22, 0,51, +,+, 779444 Simple_repeat Simple_repeat 904 chrZ 41841180 41841655 CR1-F2 474 - 41841180 41841655 0 2 304,171, 0,304, -,-, 779450 LINE CR1 904 chrZ 41843489 41843572 (AACACC)n 434 + 41843489 41843572 0 2 27,20, 0,63, +,+, 779455 Simple_repeat Simple_repeat 904 chrZ 41899601 41900352 CR1-F2 612 - 41899601 41900352 0 2 95,656, 0,95, -,-, 779499 LINE CR1 904 chrZ 41912456 41914942 CR1-H 690 - 41912456 41914942 0 2 954,1532, 0,954, -,-, 779508 LINE CR1 904 chrZ 41930003 41931620 CR1-Y2 685 + 41930003 41931620 0 2 160,1009, 0,608, +,+, 779518 LINE CR1 904 chrZ 41935216 41937052 CR1-Y3 677 - 41935216 41937052 0 2 363,1472, 0,364, -,-, 779527 LINE CR1 905 chrZ 41949509 41950045 GGLTR3B4 772 + 41949509 41950045 0 2 294,209, 0,327, +,+, 779543 LTR ERVL 905 chrZ 41960357 41964017 Char12Mar1_GG 520 - 41960357 41964017 0 3 154,32,750, 0,154,2910, -,-,-, 779559 DNA hAT-Charlie 905 chrZ 41962835 41963272 Char12Mar1_GG 659 - 41962835 41963272 0 2 130,307, 0,130, -,-, 779561 DNA hAT-Charlie 905 chrZ 41964021 41965125 CR1-Y2_Aves 320 - 41964021 41965125 0 2 385,719, 0,385, -,-, 779562 LINE CR1 905 chrZ 42004936 42005307 GGLTR5B 406 - 42004936 42005307 0 2 42,326, 0,45, -,-, 779591 LTR ERVL 905 chrZ 42021157 42021772 ENS1B-LTR 135 + 42021157 42021772 0 2 301,251, 0,364, +,+, 779597 LTR ERVL 905 chrZ 42027943 42029091 CR1-C2 828 - 42027943 42029091 0 2 286,862, 0,286, -,-, 779602 LINE CR1 905 chrZ 42063811 42064968 CR1-Y1_Aves 460 + 42063811 42064968 0 2 1016,121, 0,1036, +,+, 779625 LINE CR1 906 chrZ 42089399 42091089 CR1-C3 525 - 42089399 42091089 0 2 714,706, 0,984, -,-, 779645 LINE CR1 906 chrZ 42104043 42112486 GGERVL18-LTR 719 + 42104043 42112486 0 3 366,2350,77, 0,366,8366, +,+,+, 779658 LTR ERVL 906 chrZ 42106908 42112396 GGERVL-C-int 747 - 42106908 42112396 0 3 1785,2114,306, 0,3068,5182, -,-,-, 779660 LTR ERVL 906 chrZ 42119278 42121191 CR1-Y4 429 + 42119278 42121191 0 2 591,445, 0,1468, +,+, 779664 LINE CR1 906 chrZ 42187846 42189133 CR1-D 714 + 42187846 42189133 0 3 496,445,346, 0,496,941, +,+,+, 779702 LINE CR1 907 chrZ 42238025 42239161 CR1-X1 637 + 42238025 42239161 0 2 239,670, 0,466, +,+, 779734 LINE CR1 907 chrZ 42269976 42272356 GGLTR7-int 331 + 42269976 42272356 0 4 101,233,279,153, 0,127,1663,2227, +,+,+,+, 779761 LTR ERV1 907 chrZ 42272595 42276016 GGLTR7-int 393 + 42272595 42276016 0 3 1455,1491,101, 0,1551,3320, +,+,+, 779765 LTR ERV1 907 chrZ 42279294 42279807 CR1-H 676 + 42279294 42279807 0 2 270,243, 0,270, +,+, 779767 LINE CR1 907 chrZ 42304939 42310755 GGERV10_LTR 824 - 42304939 42310755 0 3 220,5376,219, 0,220,5597, -,-,-, 779786 LTR ERVL 907 chrZ 42331213 42332467 GGERVL-C-int 621 + 42331213 42332467 0 2 691,563, 0,691, +,+, 779801 LTR ERVL 908 chrZ 42342550 42344590 CR1-Y 742 + 42342550 42344590 0 3 1509,410,111, 0,1519,1929, +,+,+, 779809 LINE CR1 908 chrZ 42348775 42351276 CR1-F2 530 - 42348775 42351276 0 2 929,1554, 0,947, -,-, 779812 LINE CR1 908 chrZ 42368831 42369864 CR1-D2 569 - 42368831 42369864 0 2 158,300, 0,733, -,-, 779830 LINE CR1 908 chrZ 42368991 42369508 GGLTR11-int 520 + 42368991 42369508 0 2 115,104, 0,413, +,+, 779831 LTR ERV1 908 chrZ 42375721 42376609 (CCCTAA)n 369 + 42375721 42376609 0 2 667,200, 0,688, +,+, 779837 Simple_repeat Simple_repeat 908 chrZ 42379261 42381077 GGERVL-C-int 662 - 42379261 42381077 0 2 273,1533, 0,283, -,-, 779844 LTR ERVL 908 chrZ 42406582 42409894 CR1-H 706 + 42406582 42409894 0 2 1619,1375, 0,1937, +,+, 779866 LINE CR1 908 chrZ 42414526 42414579 A-rich 498 + 42414526 42414579 0 2 11,22, 0,31, +,+, 779871 Low_complexity Low_complexity 908 chrZ 42436303 42436473 CR1-F2 572 + 42436303 42436473 0 2 87,83, 0,87, +,+, 779892 LINE CR1 908 chrZ 42461269 42462695 CR1-Y1_Aves 360 + 42461269 42462695 0 2 204,234, 0,1192, +,+, 779904 LINE CR1 909 chrZ 42473643 42474710 Mariner1_GG 594 - 42473643 42474710 0 2 464,603, 0,464, -,-, 779915 DNA TcMar-Mariner 909 chrZ 42506824 42507336 TguLTR5e 303 - 42506824 42507336 0 2 112,178, 0,334, -,-, 779942 LTR ERVL 909 chrZ 42507546 42509127 CR1-F 734 - 42507546 42509127 0 2 1565,16, 0,1565, -,-, 779944 LINE CR1 909 chrZ 42518025 42519671 CR1-C 703 - 42518025 42519671 0 2 1258,388, 0,1258, -,-, 779950 LINE CR1 909 chrZ 42524101 42525883 CR1-E 719 - 42524101 42525883 0 2 481,844, 0,938, -,-, 779955 LINE CR1 909 chrZ 42538287 42539652 GGLTR8B 225 - 42538287 42539652 0 2 241,497, 0,868, -,-, 779964 LTR ERVL 909 chrZ 42542185 42546859 CR1-X2 307 - 42542185 42546859 0 2 176,168, 0,4506, -,-, 779968 LINE CR1 909 chrZ 42542498 42544201 CR1-G 378 + 42542498 42544201 0 2 77,1547, 0,156, +,+, 779971 LINE CR1 909 chrZ 42544189 42546685 CR1-C 585 + 42544189 42546685 0 3 151,724,1284, 0,488,1212, +,+,+, 779972 LINE CR1 909 chrZ 42546877 42556024 GGERVL18-int 670 + 42546877 42556024 0 4 247,220,4996,338, 0,272,3813,8809, +,+,+,+, 779974 LTR ERVL 909 chrZ 42547378 42550680 GGLTR10C1 815 - 42547378 42550680 0 2 2939,363, 0,2939, -,-, 779975 LTR ERVK 909 chrZ 42558107 42564182 GGERVL-B-int 719 + 42558107 42564182 0 6 359,83,168,3055,1857,498, 0,384,469,665,3720,5577, +,+,+,+,+,+, 779977 LTR ERVL 909 chrZ 42574522 42579396 CR1-F 351 + 42574522 42579396 0 2 765,3569, 0,1305, +,+, 779985 LINE CR1 909 chrZ 42588005 42593549 GGERV20_I-int 521 + 42588005 42593549 0 2 5232,312, 0,5232, +,+, 780000 LTR ERVL 910 chrZ 42620355 42626127 GGERVL-B-int 748 + 42620355 42626127 0 4 230,212,945,4313, 0,273,487,1459, +,+,+,+, 780027 LTR ERVL 910 chrZ 42637753 42641442 GGERVL-A-int 770 + 42637753 42641442 0 3 527,2116,1044, 0,527,2645, +,+,+, 780039 LTR ERVL 910 chrZ 42649581 42652242 CR1-Y4 266 + 42649581 42652242 0 2 203,655, 0,2006, +,+, 780047 LINE CR1 910 chrZ 42649777 42651584 CR1-D2 527 + 42649777 42651584 0 2 1647,160, 0,1647, +,+, 780048 LINE CR1 910 chrZ 42652249 42653084 GGERVL-C-int 377 + 42652249 42653084 0 2 534,301, 0,534, +,+, 780049 LTR ERVL 910 chrZ 42659452 42659992 CR1-E 637 - 42659452 42659992 0 2 343,191, 0,349, -,-, 780054 LINE CR1 910 chrZ 42665064 42668976 GGERVL18-int 427 - 42665064 42668976 0 2 1171,2320, 0,1592, -,-, 780064 LTR ERVL 910 chrZ 42671044 42671469 CR1-C2 661 + 42671044 42671469 0 2 178,198, 0,227, +,+, 780070 LINE CR1 910 chrZ 42672347 42673230 CR1-Y3 579 - 42672347 42673230 0 2 392,486, 0,397, -,-, 780073 LINE CR1 910 chrZ 42673763 42674558 CR1-C2 743 + 42673763 42674558 0 2 535,260, 0,535, +,+, 780076 LINE CR1 910 chrZ 42678591 42678661 (TACA)n 332 + 42678591 42678661 0 2 27,21, 0,49, +,+, 780082 Simple_repeat Simple_repeat 910 chrZ 42678662 42684149 GGERVL-A-int 684 - 42678662 42684149 0 4 2850,1850,211,575, 0,2851,4701,4912, -,-,-,-, 780084 LTR ERVL 910 chrZ 42685151 42687803 GGERVL-C-int 369 - 42685151 42687803 0 2 1195,1457, 0,1195, -,-, 780086 LTR ERVL 910 chrZ 42691647 42694867 CR1-Y 430 - 42691647 42694867 0 4 488,911,1113,203, 0,531,1661,3017, -,-,-,-, 780090 LINE CR1 910 chrZ 42699061 42700770 GGERVL-C-int 541 + 42699061 42700770 0 4 835,65,228,393, 0,867,1088,1316, +,+,+,+, 780098 LTR ERVL 910 chrZ 42705209 42705782 GGLTR11 775 - 42705209 42705782 0 2 248,305, 0,268, -,-, 780108 LTR ERV1 910 chrZ 42720708 42721953 CR1-B2 652 - 42720708 42721953 0 2 515,101, 0,1144, -,-, 780127 LINE CR1 911 chrZ 42738585 42739189 GGLTR5A 239 + 42738585 42739189 0 2 249,264, 0,340, +,+, 780146 LTR ERVL 911 chrZ 42748453 42750128 CR1-C4 373 + 42748453 42750128 0 3 403,213,266, 0,718,1409, +,+,+, 780157 LINE CR1 911 chrZ 42748856 42749171 GGLTR3C1 371 + 42748856 42749171 0 3 56,189,47, 0,77,268, +,+,+, 780158 LTR ERVL 911 chrZ 42752247 42753413 CR1-Y4 191 + 42752247 42753413 0 2 202,206, 0,960, +,+, 780165 LINE CR1 911 chrZ 42752455 42753206 GGLTR3C1 669 - 42752455 42753206 0 2 499,54, 0,697, -,-, 780166 LTR ERVL 911 chrZ 42761464 42763891 CR1-F2 377 - 42761464 42763891 0 4 407,580,140,224, 0,722,1316,2203, -,-,-,-, 780177 LINE CR1 911 chrZ 42764471 42770368 GGERVL-A-int 466 - 42764471 42770368 0 3 760,2293,566, 0,3038,5331, -,-,-, 780182 LTR ERVL 911 chrZ 42774230 42778113 CR1-B 348 + 42774230 42778113 0 2 693,97, 0,3786, +,+, 780192 LINE CR1 911 chrZ 42775956 42778015 GGERVL18-int 308 - 42775956 42778015 0 2 1741,287, 0,1772, -,-, 780195 LTR ERVL 911 chrZ 42778108 42778383 CR1-C4 381 + 42778108 42778383 0 2 93,170, 0,105, +,+, 780196 LINE CR1 911 chrZ 42778626 42780519 CR1-C4 387 + 42778626 42780519 0 2 1720,168, 0,1725, +,+, 780198 LINE CR1 911 chrZ 42783024 42783557 GGERVL-C-int 757 - 42783024 42783557 0 2 333,200, 0,333, -,-, 780203 LTR ERVL 911 chrZ 42784304 42785228 CR1-C3 603 + 42784304 42785228 0 2 107,556, 0,368, +,+, 780204 LINE CR1 911 chrZ 42784411 42784670 GGLTR3C2 576 + 42784411 42784670 0 3 52,67,140, 0,52,119, +,+,+, 780205 LTR ERVL 911 chrZ 42789929 42790363 Charlie12_GG 536 - 42789929 42790363 0 2 380,54, 0,380, -,-, 780209 DNA hAT-Charlie 911 chrZ 42794414 42800452 GGERV10_LTR 733 - 42794414 42800452 0 7 121,62,1427,349,2680,159,62, 0,232,295,1722,3035,5716,5976, -,-,-,-,-,-,-, 780214 LTR ERVL 911 chrZ 42805667 42808937 CR1-F 278 - 42805667 42808937 0 2 1781,1127, 0,2143, -,-, 780222 LINE CR1 911 chrZ 42811472 42812213 GGLTR11-int 385 + 42811472 42812213 0 3 79,88,220, 0,339,521, +,+,+, 780226 LTR ERV1 911 chrZ 42820716 42824675 CR1-F2 600 + 42820716 42824675 0 2 2590,476, 0,3483, +,+, 780238 LINE CR1 911 chrZ 42839704 42841915 CR1-E 610 - 42839704 42841915 0 2 1420,656, 0,1555, -,-, 780255 LINE CR1 912 chrZ 42863856 42868497 CR1-C4 491 + 42863856 42868497 0 3 91,526,130, 0,91,4511, +,+,+, 780282 LINE CR1 912 chrZ 42864469 42868368 CR1-B2 318 + 42864469 42868368 0 3 1858,12,964, 0,2923,2935, +,+,+, 780283 LINE CR1 912 chrZ 42883086 42885710 CR1-E 301 + 42883086 42885710 0 2 1273,450, 0,2174, +,+, 780299 LINE CR1 912 chrZ 42895879 42896618 CR1-X1 276 + 42895879 42896618 0 3 188,178,76, 0,188,663, +,+,+, 780320 LINE CR1 912 chrZ 42904513 42904731 GGLTR3D 703 + 42904513 42904731 0 2 167,51, 0,167, +,+, 780328 LTR ERVL 912 chrZ 42905732 42906175 Char12Mar1_GG 410 - 42905732 42906175 0 2 119,316, 0,127, -,-, 780332 DNA hAT-Charlie 912 chrZ 42908622 42908983 CR1-D2 557 + 42908622 42908983 0 2 165,159, 0,202, +,+, 780334 LINE CR1 912 chrZ 42918598 42918824 GGLTR5B 526 + 42918598 42918824 0 2 67,80, 0,146, +,+, 780342 LTR ERVL 912 chrZ 42922295 42923825 CR1-Y1_Aves 406 + 42922295 42923825 0 2 555,338, 0,1192, +,+, 780350 LINE CR1 912 chrZ 42927184 42931006 CR1-F2 493 - 42927184 42931006 0 4 258,911,457,871, 0,558,2408,2951, -,-,-,-, 780359 LINE CR1 912 chrZ 42927442 42927742 GGLTR4B 520 + 42927442 42927742 0 2 160,114, 0,186, +,+, 780360 LTR ERVL 912 chrZ 42935037 42935791 GGERVL-A-int 93 - 42935037 42935791 0 2 293,362, 0,392, -,-, 780369 LTR ERVL 912 chrZ 42938480 42941511 CR1-Y3 516 + 42938480 42941511 0 2 512,1035, 0,1996, +,+, 780375 LINE CR1 912 chrZ 42949318 42952996 CR1-C4 441 + 42949318 42952996 0 2 436,418, 0,3260, +,+, 780391 LINE CR1 912 chrZ 42967282 42968572 CR1-D 675 + 42967282 42968572 0 2 881,92, 0,1198, +,+, 780409 LINE CR1 912 chrZ 42980214 42980572 GGERVK10-int 383 + 42980214 42980572 0 2 133,59, 0,299, +,+, 780427 LTR ERVK 912 chrZ 42980955 42981809 GGLTR7-int 789 + 42980955 42981809 0 3 228,279,347, 0,228,507, +,+,+, 780428 LTR ERV1 912 chrZ 42981823 42984235 GGERV28_I-int 139 + 42981823 42984235 0 2 535,707, 0,1705, +,+, 780429 LTR ERVK 14 chrZ 42989541 42991842 CR1-C4 436 + 42989541 42991842 0 2 72,720, 0,1581, +,+, 780440 LINE CR1 913 chrZ 43021832 43022728 GGLTR5B 573 - 43021832 43022728 0 2 163,365, 0,531, -,-, 780482 LTR ERVL 913 chrZ 43027688 43028918 CR1-E 368 - 43027688 43028918 0 2 173,401, 0,829, -,-, 780492 LINE CR1 913 chrZ 43030261 43038106 CR1-C4 476 - 43030261 43038106 0 3 208,488,946, 0,6271,6899, -,-,-, 780497 LINE CR1 913 chrZ 43030475 43035626 GGERVL18-int 530 - 43030475 43035626 0 2 366,4785, 0,366, -,-, 780498 LTR ERVL 913 chrZ 43038115 43041552 GGLTR7-int 112 + 43038115 43041552 0 2 2523,811, 0,2626, +,+, 780502 LTR ERV1 913 chrZ 43045024 43046098 CR1-D 701 + 43045024 43046098 0 2 556,518, 0,556, +,+, 780504 LINE CR1 913 chrZ 43067340 43073856 GGERVL18-int 441 - 43067340 43073856 0 4 1526,296,3174,247, 0,2097,3088,6269, -,-,-,-, 780523 LTR ERVL 913 chrZ 43069720 43070429 CR1-C2 779 - 43069720 43070429 0 3 123,288,78, 0,343,631, -,-,-, 780525 LINE CR1 913 chrZ 43076510 43081967 CR1-C4 455 + 43076510 43081967 0 3 354,415,1400, 0,494,4057, +,+,+, 780530 LINE CR1 913 chrZ 43079455 43080412 GGLTR7-int 795 + 43079455 43080412 0 3 218,287,447, 0,223,510, +,+,+, 780534 LTR ERV1 913 chrZ 43087079 43089444 CR1-Y 733 - 43087079 43089444 0 2 1242,374, 0,1991, -,-, 780540 LINE CR1 913 chrZ 43090120 43091097 CR1-C 667 + 43090120 43091097 0 2 642,149, 0,828, +,+, 780543 LINE CR1 913 chrZ 43097193 43098129 ENS3-int 539 + 43097193 43098129 0 2 847,87, 0,849, +,+, 780553 LTR ERVL 913 chrZ 43110118 43111098 GGERVL-B-int 303 - 43110118 43111098 0 2 496,484, 0,496, -,-, 780579 LTR ERVL 913 chrZ 43120659 43121019 CR1-H 808 - 43120659 43121019 0 2 149,211, 0,149, -,-, 780588 LINE CR1 914 chrZ 43126084 43127853 GGERVK1-int 473 + 43126084 43127853 0 2 451,823, 0,946, +,+, 780599 LTR ERVK 914 chrZ 43129304 43129760 GGERVK10-int 421 + 43129304 43129760 0 3 150,66,191, 0,199,265, +,+,+, 780602 LTR ERVK 914 chrZ 43149661 43150272 GGLTR11-int 285 + 43149661 43150272 0 2 345,104, 0,507, +,+, 780618 LTR ERV1 914 chrZ 43150621 43155554 GGLTR7-int 361 + 43150621 43155554 0 4 643,262,812,1298, 0,1764,2715,3635, +,+,+,+, 780619 LTR ERV1 914 chrZ 43165511 43166261 GGLTR11-int 214 + 43165511 43166261 0 2 376,232, 0,518, +,+, 780624 LTR ERV1 914 chrZ 43166518 43170743 GGLTR7-int 342 + 43166518 43170743 0 6 341,921,850,221,766,715, 0,527,1483,2372,2702,3510, +,+,+,+,+,+, 780626 LTR ERV1 914 chrZ 43178848 43179307 GGLTR5A 485 + 43178848 43179307 0 2 210,122, 0,337, +,+, 780641 LTR ERVL 914 chrZ 43182405 43183148 GGLTR12C 457 + 43182405 43183148 0 2 123,251, 0,492, +,+, 780645 LTR ERVL 914 chrZ 43196887 43200671 CR1-C 511 + 43196887 43200671 0 2 651,3133, 0,651, +,+, 780659 LINE CR1 914 chrZ 43201395 43203415 CR1-X2 414 + 43201395 43203415 0 2 619,286, 0,1734, +,+, 780662 LINE CR1 914 chrZ 43208299 43218862 CR1-D 551 + 43208299 43218862 0 2 906,2256, 0,8307, +,+, 780667 LINE CR1 914 chrZ 43209241 43216606 GGERVL18-int 697 - 43209241 43216606 0 4 309,838,4471,271, 0,309,2553,7094, -,-,-,-, 780668 LTR ERVL 914 chrZ 43210378 43211797 CR1-C 784 + 43210378 43211797 0 2 823,440, 0,979, +,+, 780669 LINE CR1 914 chrZ 43251177 43252986 GGLTR7-int 629 - 43251177 43252986 0 3 306,498,127, 0,1184,1682, -,-,-, 780692 LTR ERV1 915 chrZ 43272025 43275500 CR1-C 810 + 43272025 43275500 0 2 1067,2408, 0,1067, +,+, 780710 LINE CR1 915 chrZ 43275848 43280741 TguLTR5e 290 - 43275848 43280741 0 2 190,314, 0,4579, -,-, 780711 LTR ERVL 915 chrZ 43276054 43280394 CR1-G 700 - 43276054 43280394 0 2 2611,1165, 0,3175, -,-, 780712 LINE CR1 915 chrZ 43287713 43288093 GGLTR3B4 179 + 43287713 43288093 0 3 29,193,45, 0,142,335, +,+,+, 780716 LTR ERVL 915 chrZ 43295768 43299534 CR1-F 603 - 43295768 43299534 0 2 3538,228, 0,3538, -,-, 780722 LINE CR1 915 chrZ 43324747 43325670 GGLTR3C2 621 + 43324747 43325670 0 2 270,284, 0,639, +,+, 780744 LTR ERVL 915 chrZ 43344788 43345339 GGLTR3C2 494 - 43344788 43345339 0 2 270,256, 0,295, -,-, 780755 LTR ERVL 915 chrZ 43364198 43366643 CR1-C2 653 - 43364198 43366643 0 2 1051,1394, 0,1051, -,-, 780776 LINE CR1 915 chrZ 43370845 43371932 CR1-X2 173 - 43370845 43371932 0 2 85,585, 0,502, -,-, 780782 LINE CR1 114 chrZ 43374993 43386280 GGLTR7-int 365 - 43374993 43386280 0 11 107,57,153,277,268,106,665,743,1095,517,343, 0,284,842,1296,2306,2576,7741,8440,9271,10409,10944, -,-,-,-,-,-,-,-,-,-,-, 780787 LTR ERV1 916 chrZ 43386612 43387795 GGLTR11-int 179 - 43386612 43387795 0 3 231,394,255, 0,360,928, -,-,-, 780795 LTR ERV1 916 chrZ 43388165 43390028 CR1-C2 746 + 43388165 43390028 0 2 42,1080, 0,783, +,+, 780796 LINE CR1 916 chrZ 43393509 43398606 CR1-H 650 - 43393509 43398606 0 2 2126,2558, 0,2539, -,-, 780802 LINE CR1 916 chrZ 43401557 43406484 GGERVL18-int 431 - 43401557 43406484 0 3 338,3475,1104, 0,340,3823, -,-,-, 780807 LTR ERVL 916 chrZ 43467034 43468451 GGLTR7-int 383 + 43467034 43468451 0 4 106,234,150,168, 0,132,1099,1249, +,+,+,+, 780842 LTR ERV1 916 chrZ 43469697 43470858 CR1-L3B_Croc 155 + 43469697 43470858 0 2 231,230, 0,931, +,+, 780844 LINE CR1 916 chrZ 43491059 43496801 GGLTR7-int 278 - 43491059 43496801 0 7 280,183,1386,146,150,227,116, 0,706,2518,4023,4486,5399,5626, -,-,-,-,-,-,-, 780857 LTR ERV1 917 chrZ 43544933 43545446 GGLTR3D 480 - 43544933 43545446 0 2 78,393, 0,120, -,-, 780900 LTR ERVL 917 chrZ 43563847 43564178 GGERV10_LTR 564 - 43563847 43564178 0 2 156,54, 0,277, -,-, 780915 LTR ERVL 917 chrZ 43564219 43565186 GGLTR8B 141 - 43564219 43565186 0 2 110,792, 0,175, -,-, 780916 LTR ERVL 917 chrZ 43629501 43630980 CR1-Y1_Aves 508 + 43629501 43630980 0 2 193,260, 0,1219, +,+, 780955 LINE CR1 917 chrZ 43638929 43639671 GGLTR8A 456 - 43638929 43639671 0 2 357,385, 0,357, -,-, 780962 LTR ERVL 918 chrZ 43687811 43690472 GGLTR7-int 296 - 43687811 43690472 0 3 581,1106,707, 0,766,1954, -,-,-, 780993 LTR ERV1 918 chrZ 43702923 43706493 CR1-G 799 - 43702923 43706493 0 2 666,2904, 0,666, -,-, 780999 LINE CR1 918 chrZ 43770841 43776743 GGERVL18-int 542 + 43770841 43776743 0 5 307,637,2041,2317,308, 0,314,951,3272,5594, +,+,+,+,+, 781043 LTR ERVL 919 chrZ 43813523 43814762 CR1-E 377 + 43813523 43814762 0 2 443,228, 0,1011, +,+, 781075 LINE CR1 919 chrZ 43876228 43876872 CR1-C4 466 - 43876228 43876872 0 2 207,437, 0,207, -,-, 781116 LINE CR1 919 chrZ 43879992 43881717 GGLTR11-int 669 + 43879992 43881717 0 3 1342,49,228, 0,1401,1497, +,+,+, 781118 LTR ERV1 919 chrZ 43882465 43884276 CR1-F 848 + 43882465 43884276 0 2 392,1397, 0,414, +,+, 781124 LINE CR1 919 chrZ 43897072 43898843 CR1-C2 747 - 43897072 43898843 0 2 260,909, 0,862, -,-, 781137 LINE CR1 920 chrZ 43909123 43909214 (TCTT)n 362 + 43909123 43909214 0 2 20,6, 0,85, +,+, 781145 Simple_repeat Simple_repeat 920 chrZ 43910609 43913260 GGLTR7-int 411 + 43910609 43913260 0 4 279,237,1210,168, 0,941,1178,2483, +,+,+,+, 781148 LTR ERV1 920 chrZ 43922089 43924508 GGERVL18-int 469 - 43922089 43924508 0 4 132,96,959,1217, 0,143,243,1202, -,-,-,-, 781154 LTR ERVL 920 chrZ 43931489 43932809 CR1-F 460 - 43931489 43932809 0 2 421,371, 0,949, -,-, 781164 LINE CR1 920 chrZ 43936866 43939046 CR1-F2 548 - 43936866 43939046 0 2 372,1278, 0,902, -,-, 781173 LINE CR1 920 chrZ 43940701 43943371 CR1-C 808 - 43940701 43943371 0 2 652,581, 0,2089, -,-, 781178 LINE CR1 920 chrZ 43962245 43962836 CR1-H 598 - 43962245 43962836 0 2 432,152, 0,439, -,-, 781195 LINE CR1 920 chrZ 43990396 43991465 GGERVL-B-int 651 - 43990396 43991465 0 3 524,35,462, 0,524,607, -,-,-, 781225 LTR ERVL 920 chrZ 44003313 44005277 CR1-F2 506 + 44003313 44005277 0 2 162,1169, 0,795, +,+, 781239 LINE CR1 920 chrZ 44014543 44015680 Char12Mar1_GG 661 - 44014543 44015680 0 2 231,319, 0,818, -,-, 781252 DNA hAT-Charlie 920 chrZ 44026413 44027287 CR1-Y4 619 - 44026413 44027287 0 2 63,250, 0,624, -,-, 781263 LINE CR1 920 chrZ 44030451 44033878 GGLTR7-int 405 - 44030451 44033878 0 4 101,1506,1242,206, 0,378,1979,3221, -,-,-,-, 781269 LTR ERV1 920 chrZ 44034064 44036624 GGLTR7-int 324 - 44034064 44036624 0 4 153,279,211,101, 0,476,2222,2459, -,-,-,-, 781270 LTR ERV1 921 chrZ 44044050 44045105 TguLTR5d 474 + 44044050 44045105 0 2 96,118, 0,937, +,+, 781278 LTR ERVL 921 chrZ 44055903 44058947 CR1-F 394 - 44055903 44058947 0 3 686,673,153, 0,2218,2891, -,-,-, 781287 LINE CR1 921 chrZ 44059459 44061945 GGERVL-C-int 679 - 44059459 44061945 0 2 570,1916, 0,570, -,-, 781290 LTR ERVL 921 chrZ 44081871 44082440 CR1-H 316 + 44081871 44082440 0 2 318,231, 0,338, +,+, 781307 LINE CR1 921 chrZ 44110649 44112564 CR1-C4 478 + 44110649 44112564 0 2 934,981, 0,934, +,+, 781328 LINE CR1 921 chrZ 44134109 44134854 ENS1B-LTR 210 + 44134109 44134854 0 2 353,392, 0,353, +,+, 781346 LTR ERVL 922 chrZ 44184004 44185852 CR1-D2 541 - 44184004 44185852 0 3 1091,277,199, 0,1098,1649, -,-,-, 781393 LINE CR1 922 chrZ 44189224 44190867 CR1-C4 538 + 44189224 44190867 0 3 735,385,521, 0,735,1122, +,+,+, 781395 LINE CR1 922 chrZ 44194298 44196167 CR1-F2 558 - 44194298 44196167 0 2 562,1280, 0,589, -,-, 781397 LINE CR1 922 chrZ 44234009 44235895 CR1-Y1_Aves 68 + 44234009 44235895 0 2 448,187, 0,1699, +,+, 781414 LINE CR1 922 chrZ 44234448 44235610 CR1-Y2_Aves 73 + 44234448 44235610 0 2 93,270, 0,892, +,+, 781415 LINE CR1 922 chrZ 44245490 44245879 GGLTR5A 334 + 44245490 44245879 0 2 260,114, 0,275, +,+, 781427 LTR ERVL 922 chrZ 44247895 44251598 GGERVL-B-int 290 + 44247895 44251598 0 4 227,753,591,159, 0,2168,2935,3544, +,+,+,+, 781430 LTR ERVL 922 chrZ 44265515 44267134 Mariner1_GG 405 - 44265515 44267134 0 2 704,371, 0,1248, -,-, 781438 DNA TcMar-Mariner 922 chrZ 44272002 44272831 Char12Mar1_GG 621 - 44272002 44272831 0 2 43,172, 0,657, -,-, 781446 DNA hAT-Charlie 922 chrZ 44276946 44278022 Mariner1_GG 556 - 44276946 44278022 0 2 144,932, 0,144, -,-, 781454 DNA TcMar-Mariner 922 chrZ 44278728 44279584 CR1-X2 239 + 44278728 44279584 0 2 419,345, 0,511, +,+, 781455 LINE CR1 922 chrZ 44294255 44294778 TguLTR5e 198 - 44294255 44294778 0 2 133,284, 0,239, -,-, 781466 LTR ERVL 923 chrZ 44311555 44314379 CR1-F2 543 - 44311555 44314379 0 3 400,735,541, 0,1030,2283, -,-,-, 781483 LINE CR1 923 chrZ 44341206 44343516 CR1-H 644 - 44341206 44343516 0 2 98,2212, 0,98, -,-, 781505 LINE CR1 923 chrZ 44368970 44370851 GGLTR5B 414 + 44368970 44370851 0 2 82,144, 0,1737, +,+, 781522 LTR ERVL 923 chrZ 44372925 44373393 (TTCC)n 865 + 44372925 44373393 0 2 272,180, 0,288, +,+, 781524 Simple_repeat Simple_repeat 923 chrZ 44395807 44398435 CR1-H2 826 + 44395807 44398435 0 2 1600,1028, 0,1600, +,+, 781536 LINE CR1 923 chrZ 44426243 44428434 CR1-F2 537 + 44426243 44428434 0 3 633,597,927, 0,633,1264, +,+,+, 781566 LINE CR1 924 chrZ 44545056 44546595 Mariner1_GG 594 - 44545056 44546595 0 2 954,371, 0,1168, -,-, 781649 DNA TcMar-Mariner 924 chrZ 44559579 44560202 GGLTR11-int 566 - 44559579 44560202 0 2 228,121, 0,502, -,-, 781662 LTR ERV1 925 chrZ 44600287 44604314 CR1-E 713 + 44600287 44604314 0 2 2808,1219, 0,2808, +,+, 781688 LINE CR1 925 chrZ 44609236 44611730 CR1-C 632 - 44609236 44611730 0 3 1827,181,469, 0,1837,2025, -,-,-, 781692 LINE CR1 925 chrZ 44637710 44639735 CR1-C 845 + 44637710 44639735 0 2 1377,648, 0,1377, +,+, 781711 LINE CR1 925 chrZ 44640453 44641657 CR1-G 831 - 44640453 44641657 0 2 1058,146, 0,1058, -,-, 781713 LINE CR1 925 chrZ 44664835 44666388 CR1-C4 476 - 44664835 44666388 0 2 542,328, 0,1225, -,-, 781733 LINE CR1 926 chrZ 44695870 44703718 CR1-Y 679 + 44695870 44703718 0 2 1924,1037, 0,6811, +,+, 781758 LINE CR1 926 chrZ 44705861 44707417 GGLTR8A 470 + 44705861 44707417 0 2 401,378, 0,1178, +,+, 781764 LTR ERVL 926 chrZ 44717777 44718209 GGLTR3G2 450 - 44717777 44718209 0 2 103,225, 0,207, -,-, 781772 LTR ERVL 926 chrZ 44723886 44725835 CR1-F 436 - 44723886 44725835 0 2 429,952, 0,997, -,-, 781782 LINE CR1 926 chrZ 44779658 44781855 CR1-C 723 + 44779658 44781855 0 2 242,1955, 0,242, +,+, 781822 LINE CR1 926 chrZ 44790139 44790540 CR1-Y1_Aves 484 - 44790139 44790540 0 2 144,88, 0,313, -,-, 781829 LINE CR1 926 chrZ 44811532 44811611 A-rich 488 + 44811532 44811611 0 2 33,19, 0,60, +,+, 781843 Low_complexity Low_complexity 927 chrZ 44826655 44828301 CR1-Y4 505 + 44826655 44828301 0 2 519,1118, 0,528, +,+, 781854 LINE CR1 927 chrZ 44832830 44836608 CR1-D 684 + 44832830 44836608 0 2 2366,881, 0,2897, +,+, 781858 LINE CR1 927 chrZ 44844109 44845766 GGLTR5A 200 + 44844109 44845766 0 2 233,308, 0,1349, +,+, 781867 LTR ERVL 927 chrZ 44875269 44875941 CR1-X2 564 + 44875269 44875941 0 2 567,94, 0,578, +,+, 781897 LINE CR1 927 chrZ 44923904 44924993 CR1-B2 728 - 44923904 44924993 0 2 584,90, 0,999, -,-, 781929 LINE CR1 928 chrZ 44961912 44963877 CR1-F 537 + 44961912 44963877 0 2 182,350, 0,1615, +,+, 781970 LINE CR1 928 chrZ 44973388 44974375 CR1-Y1_Aves 401 - 44973388 44974375 0 2 519,68, 0,919, -,-, 781985 LINE CR1 928 chrZ 44973887 44974305 Charlie12_GG 402 + 44973887 44974305 0 2 193,195, 0,223, +,+, 781986 DNA hAT-Charlie 928 chrZ 45001861 45005038 GGERVL-B-int 530 + 45001861 45005038 0 8 206,128,161,63,67,850,265,569, 0,207,350,542,1284,1493,2343,2608, +,+,+,+,+,+,+,+, 782006 LTR ERVL 928 chrZ 45011406 45012279 CR1-Y1_Aves 348 + 45011406 45012279 0 2 689,184, 0,689, +,+, 782016 LINE CR1 928 chrZ 45057325 45059612 CR1-F 339 - 45057325 45059612 0 3 609,326,1326, 0,635,961, -,-,-, 782040 LINE CR1 928 chrZ 45060542 45062375 CR1-F 812 - 45060542 45062375 0 2 698,766, 0,1067, -,-, 782043 LINE CR1 928 chrZ 45084131 45085728 CR1-Y2_Aves 287 + 45084131 45085728 0 2 563,154, 0,1443, +,+, 782066 LINE CR1 929 chrZ 45102020 45105361 CR1-H2 455 - 45102020 45105361 0 5 56,559,493,543,208, 0,626,1200,1963,3133, -,-,-,-,-, 782080 LINE CR1 929 chrZ 45116174 45116879 CR1-C4 421 + 45116174 45116879 0 3 178,233,289, 0,183,416, +,+,+, 782095 LINE CR1 929 chrZ 45118273 45119165 CR1-Y2_Aves 291 + 45118273 45119165 0 3 221,60,554, 0,244,338, +,+,+, 782096 LINE CR1 929 chrZ 45121896 45122849 CR1-X2 310 - 45121896 45122849 0 2 477,448, 0,505, -,-, 782101 LINE CR1 929 chrZ 45148945 45152045 GGERVL18-int 487 + 45148945 45152045 0 2 2847,249, 0,2851, +,+, 782120 LTR ERVL 929 chrZ 45179507 45180951 CR1-D2 514 - 45179507 45180951 0 2 209,418, 0,1026, -,-, 782142 LINE CR1 929 chrZ 45197617 45199108 GGLTR8B 160 + 45197617 45199108 0 2 622,220, 0,1271, +,+, 782159 LTR ERVL 930 chrZ 45290274 45290491 CR1-D2 620 - 45290274 45290491 0 2 87,109, 0,108, -,-, 782226 LINE CR1 930 chrZ 45297797 45297918 (AAAT)n 851 + 45297797 45297918 0 2 28,42, 0,79, +,+, 782234 Simple_repeat Simple_repeat 930 chrZ 45309805 45310545 CR1-C2 656 - 45309805 45310545 0 2 575,165, 0,575, -,-, 782244 LINE CR1 931 chrZ 45388453 45390824 CR1-X2 131 - 45388453 45390824 0 3 637,1152,394, 0,702,1977, -,-,-, 782310 LINE CR1 931 chrZ 45399653 45400154 CR1-C4 187 + 45399653 45400154 0 2 95,396, 0,105, +,+, 782322 LINE CR1 931 chrZ 45420984 45426104 CR1-X2 280 + 45420984 45426104 0 4 871,612,712,98, 0,2865,3477,5022, +,+,+,+, 782340 LINE CR1 931 chrZ 45421920 45423848 GGLTR5B 336 - 45421920 45423848 0 2 177,398, 0,1530, -,-, 782341 LTR ERVL 931 chrZ 45425172 45425965 CR1-D2 426 + 45425172 45425965 0 2 248,68, 0,725, +,+, 782343 LINE CR1 931 chrZ 45429174 45431840 CR1-C 854 - 45429174 45431840 0 2 139,2522, 0,144, -,-, 782347 LINE CR1 931 chrZ 45476930 45477873 CR1-D2 483 - 45476930 45477873 0 2 521,422, 0,521, -,-, 782385 LINE CR1 932 chrZ 45484101 45484184 (GCTCCG)n 348 + 45484101 45484184 0 2 10,21, 0,62, +,+, 782390 Simple_repeat Simple_repeat 932 chrZ 45500462 45500533 (TAATT)n 312 + 45500462 45500533 0 2 20,8, 0,63, +,+, 782407 Simple_repeat Simple_repeat 932 chrZ 45572356 45572672 GGERV10_LTR 648 + 45572356 45572672 0 2 68,160, 0,156, +,+, 782453 LTR ERVL 116 chrZ 45609658 45613641 CR1-C3 525 + 45609658 45613641 0 3 2277,228,280, 0,3129,3703, +,+,+, 782481 LINE CR1 933 chrZ 45632149 45633537 CR1-X 433 + 45632149 45633537 0 3 863,322,156, 0,910,1232, +,+,+, 782501 LINE CR1 933 chrZ 45654601 45655027 CR1-D2 633 - 45654601 45655027 0 2 330,96, 0,330, -,-, 782524 LINE CR1 933 chrZ 45683660 45685458 Charlie12_GG 616 - 45683660 45685458 0 2 913,297, 0,1501, -,-, 782549 DNA hAT-Charlie 933 chrZ 45684573 45685161 GGLTR3G2 283 - 45684573 45685161 0 2 69,484, 0,104, -,-, 782550 LTR ERVL 933 chrZ 45704877 45705945 GGLTR8A 265 + 45704877 45705945 0 2 332,410, 0,658, +,+, 782567 LTR ERVL 933 chrZ 45711889 45713171 CR1-C4 554 - 45711889 45713171 0 2 939,343, 0,939, -,-, 782571 LINE CR1 933 chrZ 45731591 45732048 CR1-Y4 614 + 45731591 45732048 0 2 373,81, 0,376, +,+, 782580 LINE CR1 933 chrZ 45741790 45742928 CR1-C4 617 - 45741790 45742928 0 2 342,47, 0,1091, -,-, 782591 LINE CR1 934 chrZ 45747107 45747518 CR1-X 528 + 45747107 45747518 0 2 351,58, 0,353, +,+, 782594 LINE CR1 934 chrZ 45749675 45750605 CR1-X2 142 + 45749675 45750605 0 2 173,383, 0,547, +,+, 782597 LINE CR1 934 chrZ 45757042 45758748 CR1-Y3 616 - 45757042 45758748 0 2 84,236, 0,1470, -,-, 782603 LINE CR1 934 chrZ 45793866 45793941 (ATACAT)n 356 + 45793866 45793941 0 2 8,33, 0,42, +,+, 782637 Simple_repeat Simple_repeat 934 chrZ 45843892 45844214 CR1-C4 435 - 45843892 45844214 0 2 122,197, 0,125, -,-, 782666 LINE CR1 935 chrZ 45961059 45961705 GGLTR5B 494 + 45961059 45961705 0 2 375,210, 0,436, +,+, 782726 LTR ERVL 935 chrZ 45971179 45974895 GGLTR5B 481 + 45971179 45974895 0 2 96,399, 0,3317, +,+, 782731 LTR ERVL 936 chrZ 46075541 46075689 Char12Mar1_GG 731 - 46075541 46075689 0 2 64,84, 0,64, -,-, 782788 DNA hAT-Charlie 936 chrZ 46105570 46106696 CR1-C3 537 - 46105570 46106696 0 2 229,288, 0,838, -,-, 782801 LINE CR1 936 chrZ 46122672 46123651 CR1-F2 423 - 46122672 46123651 0 2 446,505, 0,474, -,-, 782816 LINE CR1 936 chrZ 46125193 46126947 CR1-X 560 + 46125193 46126947 0 2 325,1217, 0,537, +,+, 782819 LINE CR1 936 chrZ 46128490 46129267 CR1-E 741 - 46128490 46129267 0 2 357,420, 0,357, -,-, 782823 LINE CR1 14 chrZ 46137041 46138994 CR1-C2 677 - 46137041 46138994 0 2 643,1306, 0,647, -,-, 782830 LINE CR1 937 chrZ 46140538 46144581 GGERV20_I-int 497 + 46140538 46144581 0 3 459,1935,581, 0,463,3462, +,+,+, 782832 LTR ERVL 937 chrZ 46142973 46143338 GGLTR3C2 624 - 46142973 46143338 0 2 125,240, 0,125, -,-, 782833 LTR ERVL 937 chrZ 46143372 46144027 GGLTR11-int 525 - 46143372 46144027 0 2 224,148, 0,507, -,-, 782834 LTR ERV1 937 chrZ 46151497 46152148 Char12Mar1_GG 506 - 46151497 46152148 0 2 264,352, 0,299, -,-, 782841 DNA hAT-Charlie 937 chrZ 46161504 46163273 CR1-C4 569 + 46161504 46163273 0 2 714,1050, 0,719, +,+, 782846 LINE CR1 937 chrZ 46225902 46227887 CR1-Y4 594 + 46225902 46227887 0 2 1251,129, 0,1856, +,+, 782885 LINE CR1 938 chrZ 46279547 46280213 GGLTR5A 310 + 46279547 46280213 0 2 377,154, 0,512, +,+, 782909 LTR ERVL 938 chrZ 46296792 46297555 Char12Mar1_GG 600 - 46296792 46297555 0 2 254,282, 0,481, -,-, 782918 DNA hAT-Charlie 938 chrZ 46352188 46352805 GGLTR3G1 726 + 46352188 46352805 0 2 503,54, 0,563, +,+, 782953 LTR ERVL 938 chrZ 46355331 46356657 CR1-X2 521 + 46355331 46356657 0 3 680,559,43, 0,680,1283, +,+,+, 782957 LINE CR1 938 chrZ 46358447 46361228 GGERVL-A-int 799 + 46358447 46361228 0 3 523,238,2012, 0,523,769, +,+,+, 782960 LTR ERVL 938 chrZ 46370485 46371255 CR1-E 564 - 46370485 46371255 0 2 54,716, 0,54, -,-, 782966 LINE CR1 938 chrZ 46382950 46383031 (TTTC)n 422 + 46382950 46383031 0 2 13,16, 0,65, +,+, 782979 Simple_repeat Simple_repeat 938 chrZ 46383290 46383899 GGLTR11-int 566 - 46383290 46383899 0 2 112,124, 0,485, -,-, 782981 LTR ERV1 939 chrZ 46407760 46408368 CR1-H 897 + 46407760 46408368 0 2 32,468, 0,140, +,+, 782991 LINE CR1 939 chrZ 46418748 46419236 CR1-H2 729 + 46418748 46419236 0 2 88,212, 0,276, +,+, 782995 LINE CR1 939 chrZ 46426650 46428056 CR1-H 766 + 46426650 46428056 0 2 1087,319, 0,1087, +,+, 783003 LINE CR1 939 chrZ 46520252 46522280 GGERVL-B-int 745 + 46520252 46522280 0 3 1139,398,471, 0,1159,1557, +,+,+, 783075 LTR ERVL 940 chrZ 46556917 46557314 Mariner1b_GG 609 - 46556917 46557314 0 2 216,181, 0,216, -,-, 783093 DNA TcMar-Mariner 940 chrZ 46575266 46577132 CR1-F 588 - 46575266 46577132 0 2 1683,177, 0,1689, -,-, 783105 LINE CR1 940 chrZ 46598641 46600386 GGERVL-B-int 360 - 46598641 46600386 0 2 977,143, 0,1602, -,-, 783120 LTR ERVL 940 chrZ 46624028 46625115 Mariner1_GG 598 + 46624028 46625115 0 2 777,259, 0,828, +,+, 783141 DNA TcMar-Mariner 940 chrZ 46629805 46630178 GGLTR3D 678 + 46629805 46630178 0 2 256,111, 0,262, +,+, 783148 LTR ERVL 940 chrZ 46646976 46648036 CR1-C4 518 - 46646976 46648036 0 2 836,207, 0,853, -,-, 783162 LINE CR1 940 chrZ 46650176 46650905 CR1-Y1_Aves 222 - 46650176 46650905 0 2 200,494, 0,235, -,-, 783164 LINE CR1 940 chrZ 46652216 46653214 CR1-C2 755 + 46652216 46653214 0 2 686,296, 0,702, +,+, 783167 LINE CR1 940 chrZ 46658776 46659671 CR1-E 774 + 46658776 46659671 0 2 443,452, 0,443, +,+, 783169 LINE CR1 941 chrZ 46671181 46671474 GGLTR3B4 225 + 46671181 46671474 0 2 152,87, 0,206, +,+, 783177 LTR ERVL 941 chrZ 46683706 46685882 GGLTR9 600 - 46683706 46685882 0 2 222,147, 0,2029, -,-, 783190 LTR ERVL 941 chrZ 46694201 46694614 CR1-E 743 - 46694201 46694614 0 2 49,364, 0,49, -,-, 783198 LINE CR1 941 chrZ 46771079 46774418 CR1-C 842 + 46771079 46774418 0 2 2302,991, 0,2348, +,+, 783253 LINE CR1 941 chrZ 46777407 46778346 CR1-H 784 + 46777407 46778346 0 2 170,714, 0,225, +,+, 783260 LINE CR1 941 chrZ 46780121 46782054 CR1-F2 488 - 46780121 46782054 0 3 1155,436,342, 0,1155,1591, -,-,-, 783264 LINE CR1 941 chrZ 46785910 46790833 GGERVL18-int 480 + 46785910 46790833 0 4 1812,2665,31,97, 0,1818,4795,4826, +,+,+,+, 783269 LTR ERVL 941 chrZ 46791553 46792218 CR1-D2 406 + 46791553 46792218 0 2 212,453, 0,212, +,+, 783270 LINE CR1 942 chrZ 46809027 46810214 Mariner1_GG 618 - 46809027 46810214 0 2 1053,134, 0,1053, -,-, 783288 DNA TcMar-Mariner 942 chrZ 46825219 46826322 CR1-C4 381 - 46825219 46826322 0 2 618,481, 0,622, -,-, 783295 LINE CR1 942 chrZ 46840001 46844467 CR1-E 459 - 46840001 46844467 0 5 130,189,69,112,1264, 0,820,1009,1078,3202, -,-,-,-,-, 783309 LINE CR1 942 chrZ 46841182 46843201 CR1-C4 566 + 46841182 46843201 0 2 372,1458, 0,561, +,+, 783311 LINE CR1 942 chrZ 46876404 46876818 CR1-E 671 + 46876404 46876818 0 2 120,209, 0,205, +,+, 783343 LINE CR1 942 chrZ 46903355 46904920 Char12Mar1_GG 514 - 46903355 46904920 0 2 591,231, 0,1334, -,-, 783371 DNA hAT-Charlie 942 chrZ 46903969 46904689 ENS1-LTR 303 + 46903969 46904689 0 2 359,361, 0,359, +,+, 783372 LTR ERVL 943 chrZ 46926197 46927349 GGLTR5B 626 - 46926197 46927349 0 3 176,91,260, 0,220,892, -,-,-, 783386 LTR ERVL 943 chrZ 46927609 46929676 Mariner1_GG 528 - 46927609 46929676 0 2 393,874, 0,1193, -,-, 783389 DNA TcMar-Mariner 943 chrZ 46986337 46986814 GGLTR5A 467 + 46986337 46986814 0 2 229,139, 0,338, +,+, 783439 LTR ERVL 943 chrZ 47004265 47008960 GGERVL-B-int 481 - 47004265 47008960 0 4 56,3722,369,194, 0,339,4061,4501, -,-,-,-, 783453 LTR ERVL 943 chrZ 47023014 47023504 GGLTR3F2 780 + 47023014 47023504 0 2 233,225, 0,265, +,+, 783469 LTR ERVL 943 chrZ 47037404 47039644 CR1-X2 346 - 47037404 47039644 0 2 279,1890, 0,350, -,-, 783481 LINE CR1 944 chrZ 47069301 47070920 CR1-L3B_Croc 195 + 47069301 47070920 0 2 185,760, 0,859, +,+, 783508 LINE CR1 944 chrZ 47094899 47095836 CR1-Y 651 + 47094899 47095836 0 2 281,286, 0,651, +,+, 783525 LINE CR1 944 chrZ 47095835 47096309 CR1-X2 592 - 47095835 47096309 0 2 90,384, 0,90, -,-, 783526 LINE CR1 944 chrZ 47107830 47109799 CR1-C3 635 + 47107830 47109799 0 2 1285,684, 0,1285, +,+, 783538 LINE CR1 944 chrZ 47115976 47117934 CR1-Y4 547 + 47115976 47117934 0 3 74,907,530, 0,74,1428, +,+,+, 783543 LINE CR1 944 chrZ 47145304 47146090 CR1-F2 717 - 47145304 47146090 0 2 438,94, 0,692, -,-, 783562 LINE CR1 944 chrZ 47149621 47150698 CR1-C4 453 + 47149621 47150698 0 2 439,638, 0,439, +,+, 783568 LINE CR1 944 chrZ 47158833 47162091 CR1-F 229 + 47158833 47162091 0 3 973,314,1049, 0,1170,2209, +,+,+, 783572 LINE CR1 944 chrZ 47160360 47161014 CR1-C3 649 + 47160360 47161014 0 2 564,54, 0,600, +,+, 783574 LINE CR1 944 chrZ 47167867 47168280 Char12Mar1_GG 578 - 47167867 47168280 0 2 133,280, 0,133, -,-, 783579 DNA hAT-Charlie 945 chrZ 47186118 47187104 CR1-F2 326 + 47186118 47187104 0 3 193,529,264, 0,193,722, +,+,+, 783588 LINE CR1 945 chrZ 47233640 47235540 CR1-C4 429 + 47233640 47235540 0 2 441,1331, 0,569, +,+, 783614 LINE CR1 945 chrZ 47245127 47246784 CR1-C4 456 + 47245127 47246784 0 3 344,1183,114, 0,347,1543, +,+,+, 783624 LINE CR1 945 chrZ 47252697 47255028 CR1-E 342 + 47252697 47255028 0 2 237,84, 0,2247, +,+, 783628 LINE CR1 946 chrZ 47349972 47350548 GGLTR3A 889 - 47349972 47350548 0 2 46,530, 0,46, -,-, 783702 LTR ERVL 946 chrZ 47403600 47405708 CR1-X2 528 + 47403600 47405708 0 4 821,497,590,141, 0,880,1377,1967, +,+,+,+, 783732 LINE CR1 946 chrZ 47416746 47416800 (CCTTT)n 446 + 47416746 47416800 0 2 17,13, 0,41, +,+, 783738 Simple_repeat Simple_repeat 946 chrZ 47433336 47433908 CR1-F2 457 + 47433336 47433908 0 2 98,295, 0,277, +,+, 783747 LINE CR1 946 chrZ 47443977 47445114 CR1-Y1_Aves 419 + 47443977 47445114 0 2 602,147, 0,990, +,+, 783751 LINE CR1 947 chrZ 47462282 47463010 CR1-Y1_Aves 354 + 47462282 47463010 0 2 190,106, 0,622, +,+, 783762 LINE CR1 947 chrZ 47475691 47477476 CR1-E 704 + 47475691 47477476 0 2 319,543, 0,1242, +,+, 783769 LINE CR1 947 chrZ 47484333 47484910 CR1-Y1_Aves 510 - 47484333 47484910 0 2 446,131, 0,446, -,-, 783776 LINE CR1 947 chrZ 47492541 47493536 CR1-D 594 + 47492541 47493536 0 2 473,522, 0,473, +,+, 783780 LINE CR1 947 chrZ 47546125 47547486 CR1-D2 573 - 47546125 47547486 0 3 314,260,787, 0,314,574, -,-,-, 783805 LINE CR1 947 chrZ 47558314 47561547 Mariner1_GG 555 - 47558314 47561547 0 2 673,557, 0,2676, -,-, 783813 DNA TcMar-Mariner 947 chrZ 47559736 47560988 CR1-Y2 680 + 47559736 47560988 0 2 466,786, 0,466, +,+, 783815 LINE CR1 947 chrZ 47562420 47563056 CR1-D 687 - 47562420 47563056 0 2 214,422, 0,214, -,-, 783816 LINE CR1 948 chrZ 47594329 47595105 CR1-C4 534 + 47594329 47595105 0 2 516,260, 0,516, +,+, 783834 LINE CR1 948 chrZ 47603809 47606637 CR1-Y3 653 + 47603809 47606637 0 2 389,324, 0,2504, +,+, 783841 LINE CR1 948 chrZ 47604532 47605202 CR1-D2 562 - 47604532 47605202 0 2 406,263, 0,407, -,-, 783843 LINE CR1 948 chrZ 47635148 47636712 CR1-X1 599 - 47635148 47636712 0 2 453,417, 0,1147, -,-, 783869 LINE CR1 948 chrZ 47636974 47638172 GGLTR8B 320 - 47636974 47638172 0 2 650,69, 0,1129, -,-, 783870 LTR ERVL 948 chrZ 47697403 47698430 GGLTR5B 391 - 47697403 47698430 0 2 159,305, 0,722, -,-, 783914 LTR ERVL 949 chrZ 47715076 47717672 CR1-X2 511 + 47715076 47717672 0 3 765,379,617, 0,1574,1979, +,+,+, 783932 LINE CR1 949 chrZ 47742007 47742248 CR1-C4 353 + 47742007 47742248 0 2 127,109, 0,132, +,+, 783950 LINE CR1 949 chrZ 47763915 47765315 CR1-Y1_Aves 276 - 47763915 47765315 0 2 621,772, 0,628, -,-, 783964 LINE CR1 949 chrZ 47766754 47770777 GGLTR7-int 512 - 47766754 47770777 0 4 885,1947,291,114, 0,972,3618,3909, -,-,-,-, 783965 LTR ERV1 949 chrZ 47776816 47777573 CR1-Y 671 + 47776816 47777573 0 2 240,517, 0,240, +,+, 783972 LINE CR1 949 chrZ 47801237 47801759 GGLTR5B 308 - 47801237 47801759 0 2 77,248, 0,274, -,-, 783988 LTR ERVL 949 chrZ 47806554 47808006 CR1-D2 579 - 47806554 47808006 0 2 261,1191, 0,261, -,-, 783995 LINE CR1 949 chrZ 47823023 47823346 CR1-Y1_Aves 411 - 47823023 47823346 0 2 185,124, 0,199, -,-, 784006 LINE CR1 950 chrZ 47969994 47970960 Mariner1_GG 444 - 47969994 47970960 0 2 456,510, 0,456, -,-, 784105 DNA TcMar-Mariner 951 chrZ 48004041 48005135 Char12Mar1_GG 557 - 48004041 48005135 0 2 343,210, 0,884, -,-, 784133 DNA hAT-Charlie 951 chrZ 48028470 48030306 CR1-Y4 590 - 48028470 48030306 0 2 42,1794, 0,42, -,-, 784157 LINE CR1 951 chrZ 48066419 48066482 (TGT)n 454 + 48066419 48066482 0 2 6,23, 0,40, +,+, 784194 Simple_repeat Simple_repeat 952 chrZ 48195321 48195982 CR1-C4 503 + 48195321 48195982 0 2 554,107, 0,554, +,+, 784281 LINE CR1 953 chrZ 48286231 48286273 (TTTTTCT)n 552 + 48286231 48286273 0 2 8,6, 0,36, +,+, 784338 Simple_repeat Simple_repeat 953 chrZ 48301741 48303681 CR1-C4 592 - 48301741 48303681 0 2 929,208, 0,1732, -,-, 784352 LINE CR1 953 chrZ 48321932 48323468 GGERVL-A-int 187 - 48321932 48323468 0 3 438,395,87, 0,731,1449, -,-,-, 784373 LTR ERVL 953 chrZ 48323991 48324405 GGLTR5A 360 - 48323991 48324405 0 2 126,82, 0,332, -,-, 784374 LTR ERVL 953 chrZ 48325361 48325867 CR1-Y2_Aves 207 - 48325361 48325867 0 2 141,210, 0,296, -,-, 784378 LINE CR1 953 chrZ 48345861 48349018 CR1-D2 471 - 48345861 48349018 0 5 126,481,407,1067,493, 0,126,607,1583,2664, -,-,-,-,-, 784392 LINE CR1 953 chrZ 48352106 48352644 CR1-Y4 333 + 48352106 48352644 0 2 226,312, 0,226, +,+, 784394 LINE CR1 953 chrZ 48361663 48363130 GGLTR8B 382 - 48361663 48363130 0 2 262,71, 0,1396, -,-, 784400 LTR ERVL 954 chrZ 48400734 48401451 CR1-C4 390 - 48400734 48401451 0 2 256,441, 0,276, -,-, 784435 LINE CR1 954 chrZ 48416394 48416770 REP131 327 - 48416394 48416770 0 2 197,56, 0,320, -,-, 784446 DNA? DNA? 954 chrZ 48417815 48418295 TguLTR5e 337 + 48417815 48418295 0 2 108,344, 0,136, +,+, 784447 LTR ERVL 954 chrZ 48430403 48435026 GGLTR5A 388 - 48430403 48435026 0 2 197,374, 0,4249, -,-, 784456 LTR ERVL 954 chrZ 48430982 48434471 GGERVL-B-int 267 - 48430982 48434471 0 2 1938,236, 0,3253, -,-, 784457 LTR ERVL 954 chrZ 48443537 48444923 CR1-C3 644 - 48443537 48444923 0 2 1061,319, 0,1067, -,-, 784466 LINE CR1 954 chrZ 48446809 48447491 CR1-D2 587 + 48446809 48447491 0 2 133,546, 0,136, +,+, 784468 LINE CR1 954 chrZ 48465593 48466029 CR1-C2 604 + 48465593 48466029 0 2 312,117, 0,319, +,+, 784493 LINE CR1 954 chrZ 48489220 48491419 CR1-X1 426 - 48489220 48491419 0 2 56,84, 0,2115, -,-, 784514 LINE CR1 955 chrZ 48512313 48512985 CR1-Y4 381 - 48512313 48512985 0 2 612,60, 0,612, -,-, 784541 LINE CR1 955 chrZ 48527425 48530637 CR1-Y3 594 - 48527425 48530637 0 2 914,322, 0,2890, -,-, 784558 LINE CR1 955 chrZ 48528395 48530307 CR1-C 738 + 48528395 48530307 0 2 336,1246, 0,666, +,+, 784560 LINE CR1 955 chrZ 48528731 48529065 GGERV10_LTR 600 - 48528731 48529065 0 2 160,86, 0,248, -,-, 784561 LTR ERVL 955 chrZ 48541391 48545539 CR1-Y4 439 - 48541391 48545539 0 5 235,439,630,780,198, 0,418,857,2401,3950, -,-,-,-,-, 784570 LINE CR1 955 chrZ 48556702 48558211 CR1-C4 499 - 48556702 48558211 0 2 461,1048, 0,461, -,-, 784585 LINE CR1 955 chrZ 48569329 48571966 GGERVL-C-int 287 - 48569329 48571966 0 2 650,1222, 0,1415, -,-, 784594 LTR ERVL 955 chrZ 48569991 48570749 CR1-F2 409 + 48569991 48570749 0 3 504,131,110, 0,517,648, +,+,+, 784595 LINE CR1 955 chrZ 48589364 48595144 CR1-X1 530 - 48589364 48595144 0 3 304,504,247, 0,4692,5533, -,-,-, 784610 LINE CR1 955 chrZ 48589693 48594004 CR1-C 811 + 48589693 48594004 0 4 1918,483,890,58, 0,2010,3359,4253, +,+,+,+, 784611 LINE CR1 955 chrZ 48594549 48594897 GGLTR8B 474 + 48594549 48594897 0 2 184,143, 0,205, +,+, 784615 LTR ERVL 955 chrZ 48602553 48603357 CR1-D2 620 - 48602553 48603357 0 2 202,599, 0,205, -,-, 784623 LINE CR1 955 chrZ 48603612 48609963 CR1-H 605 + 48603612 48609963 0 3 179,798,3898, 0,217,2453, +,+,+, 784624 LINE CR1 956 chrZ 48628903 48632965 CR1-Y4 482 + 48628903 48632965 0 4 973,905,52,297, 0,2266,3183,3765, +,+,+,+, 784646 LINE CR1 956 chrZ 48638867 48639419 CR1-D2 78 - 48638867 48639419 0 2 18,330, 0,222, -,-, 784653 LINE CR1 956 chrZ 48656368 48658044 CR1-C4 346 + 48656368 48658044 0 2 1452,199, 0,1477, +,+, 784667 LINE CR1 956 chrZ 48665590 48669985 CR1-Y4 395 - 48665590 48669985 0 4 876,274,1010,443, 0,1681,2443,3952, -,-,-,-, 784676 LINE CR1 956 chrZ 48675806 48677863 CR1-C4 512 + 48675806 48677863 0 3 515,586,951, 0,520,1106, +,+,+, 784684 LINE CR1 956 chrZ 48696646 48697591 CR1-F2 870 + 48696646 48697591 0 2 843,55, 0,890, +,+, 784699 LINE CR1 956 chrZ 48721559 48721844 Char12Mar1_GG 568 - 48721559 48721844 0 2 15,224, 0,61, -,-, 784714 DNA hAT-Charlie 956 chrZ 48727917 48728102 GA-rich 92 + 48727917 48728102 0 2 48,45, 0,140, +,+, 784719 Low_complexity Low_complexity 956 chrZ 48728721 48729860 CR1-C 778 - 48728721 48729860 0 2 917,222, 0,917, -,-, 784722 LINE CR1 956 chrZ 48734402 48736143 CR1-E 643 - 48734402 48736143 0 2 586,1155, 0,586, -,-, 784725 LINE CR1 956 chrZ 48756727 48757893 CR1-F 279 + 48756727 48757893 0 2 127,972, 0,194, +,+, 784744 LINE CR1 957 chrZ 48761373 48767346 CR1-X2 436 + 48761373 48767346 0 5 666,427,1572,1049,163, 0,666,1838,4749,5810, +,+,+,+,+, 784753 LINE CR1 957 chrZ 48780518 48782974 CR1-F 401 + 48780518 48782974 0 2 2055,364, 0,2092, +,+, 784771 LINE CR1 957 chrZ 48813884 48813982 (TATT)n 332 + 48813884 48813982 0 2 20,19, 0,79, +,+, 784824 Simple_repeat Simple_repeat 957 chrZ 48825681 48826751 CR1-C 564 + 48825681 48826751 0 2 238,458, 0,612, +,+, 784843 LINE CR1 957 chrZ 48841359 48842182 CR1-F2 364 - 48841359 48842182 0 2 453,366, 0,457, -,-, 784862 LINE CR1 957 chrZ 48851563 48852592 CR1-C 710 - 48851563 48852592 0 2 173,330, 0,699, -,-, 784880 LINE CR1 957 chrZ 48860827 48860910 (TATTTT)n 446 + 48860827 48860910 0 2 42,8, 0,75, +,+, 784889 Simple_repeat Simple_repeat 957 chrZ 48861155 48861886 CR1-H 799 + 48861155 48861886 0 2 219,512, 0,219, +,+, 784891 LINE CR1 957 chrZ 48864852 48865073 Char12Mar1_GG 602 - 48864852 48865073 0 2 127,94, 0,127, -,-, 784895 DNA hAT-Charlie 957 chrZ 48876893 48877523 CR1-D 593 + 48876893 48877523 0 2 529,101, 0,529, +,+, 784919 LINE CR1 957 chrZ 48877755 48877831 A-rich 619 + 48877755 48877831 0 2 19,36, 0,40, +,+, 784921 Low_complexity Low_complexity 957 chrZ 48885052 48889426 CR1-B 885 - 48885052 48889426 0 3 520,787,3064, 0,520,1310, -,-,-, 784925 LINE CR1 958 chrZ 48890590 48892155 CR1-Y4 479 - 48890590 48892155 0 2 223,925, 0,640, -,-, 784929 LINE CR1 958 chrZ 48904504 48904952 Char12Mar1_GG 468 + 48904504 48904952 0 2 68,47, 0,401, +,+, 784950 DNA hAT-Charlie 958 chrZ 48906869 48911543 CR1-F 566 + 48906869 48911543 0 2 437,1262, 0,3412, +,+, 784956 LINE CR1 958 chrZ 48907316 48910151 GGLTR10D 571 - 48907316 48910151 0 2 124,2711, 0,124, -,-, 784957 LTR ERVK 958 chrZ 48913475 48915389 CR1-Y 738 + 48913475 48915389 0 2 481,173, 0,1741, +,+, 784961 LINE CR1 958 chrZ 48928288 48928715 GGLTR3C1 403 - 48928288 48928715 0 2 152,249, 0,178, -,-, 784982 LTR ERVL 958 chrZ 48930313 48933246 CR1-F 769 + 48930313 48933246 0 2 304,1041, 0,1892, +,+, 784984 LINE CR1 958 chrZ 48935018 48937283 CR1-F 381 + 48935018 48937283 0 2 217,1443, 0,822, +,+, 784992 LINE CR1 958 chrZ 48937598 48938085 GGLTR3F2 758 + 48937598 48938085 0 2 383,76, 0,411, +,+, 784995 LTR ERVL 958 chrZ 48950163 48950815 CR1-Y2_Aves 150 + 48950163 48950815 0 2 163,311, 0,341, +,+, 785014 LINE CR1 958 chrZ 48955604 48958361 GGLTR11-int 569 - 48955604 48958361 0 4 117,694,676,869, 0,497,1209,1888, -,-,-,-, 785023 LTR ERV1 958 chrZ 48963947 48965090 ENS1-LTR 830 - 48963947 48965090 0 2 605,538, 0,605, -,-, 785029 LTR ERVL 958 chrZ 48971157 48971469 CR1-C2 776 + 48971157 48971469 0 2 166,146, 0,166, +,+, 785037 LINE CR1 958 chrZ 48982463 48988019 GGERVL-B-int 809 - 48982463 48988019 0 2 5077,477, 0,5079, -,-, 785051 LTR ERVL 958 chrZ 48996713 48997075 GGERVL18-LTR 680 + 48996713 48997075 0 2 239,96, 0,266, +,+, 785057 LTR ERVL 958 chrZ 49004950 49005877 CR1-C4 356 - 49004950 49005877 0 2 247,655, 0,272, -,-, 785065 LINE CR1 958 chrZ 49008888 49009258 GGLTR12C 643 - 49008888 49009258 0 2 295,51, 0,319, -,-, 785071 LTR ERVL 959 chrZ 49021305 49021897 GGLTR3C2 579 + 49021305 49021897 0 2 200,185, 0,407, +,+, 785092 LTR ERVL 959 chrZ 49022112 49027699 GGERVL18-int 787 - 49022112 49027699 0 4 343,1215,3450,202, 0,343,1927,5385, -,-,-,-, 785095 LTR ERVL 959 chrZ 49039040 49040972 CR1-Y2 674 + 49039040 49040972 0 2 726,711, 0,1221, +,+, 785113 LINE CR1 959 chrZ 49055382 49056541 Char12Mar1_GG 492 - 49055382 49056541 0 2 209,399, 0,760, -,-, 785134 DNA hAT-Charlie 959 chrZ 49062241 49062872 GGLTR5A 405 - 49062241 49062872 0 2 110,402, 0,229, -,-, 785141 LTR ERVL 959 chrZ 49069506 49070067 GGLTR5A 192 + 49069506 49070067 0 2 382,152, 0,409, +,+, 785157 LTR ERVL 959 chrZ 49071816 49078669 CR1-D2 357 - 49071816 49078669 0 3 775,706,320, 0,5279,6533, -,-,-, 785162 LINE CR1 959 chrZ 49083941 49087050 CR1-Y 699 - 49083941 49087050 0 2 2169,372, 0,2737, -,-, 785172 LINE CR1 959 chrZ 49091858 49093330 CR1-E 337 + 49091858 49093330 0 3 484,891,77, 0,495,1395, +,+,+, 785176 LINE CR1 959 chrZ 49093342 49095347 GGLTR3C2 616 + 49093342 49095347 0 3 372,106,93, 0,957,1912, +,+,+, 785177 LTR ERVL 959 chrZ 49099422 49099547 (TAATA)n 338 + 49099422 49099547 0 2 49,11, 0,114, +,+, 785186 Simple_repeat Simple_repeat 959 chrZ 49100832 49104396 GGLTR3A 630 - 49100832 49104396 0 2 50,571, 0,2993, -,-, 785190 LTR ERVL 959 chrZ 49104728 49107569 CR1-C4 587 - 49104728 49107569 0 2 1150,808, 0,2033, -,-, 785195 LINE CR1 959 chrZ 49112439 49112893 CR1-Y1_Aves 250 + 49112439 49112893 0 2 289,165, 0,289, +,+, 785204 LINE CR1 959 chrZ 49118746 49119241 GGLTR3F2 678 + 49118746 49119241 0 2 230,212, 0,283, +,+, 785210 LTR ERVL 959 chrZ 49127909 49129978 CR1-C 832 + 49127909 49129978 0 2 1208,861, 0,1208, +,+, 785225 LINE CR1 959 chrZ 49133247 49134156 GGLTR12B 751 - 49133247 49134156 0 2 243,666, 0,243, -,-, 785229 LTR ERVL 959 chrZ 49137102 49137195 (TTG)n 308 + 49137102 49137195 0 2 49,15, 0,78, +,+, 785233 Simple_repeat Simple_repeat 959 chrZ 49145304 49145656 GGLTR5B 381 + 49145304 49145656 0 2 134,115, 0,237, +,+, 785246 LTR ERVL 960 chrZ 49158326 49161344 CR1-Y 440 + 49158326 49161344 0 2 714,1919, 0,1099, +,+, 785265 LINE CR1 960 chrZ 49161343 49162375 CR1-C4 373 + 49161343 49162375 0 2 769,252, 0,780, +,+, 785267 LINE CR1 960 chrZ 49166343 49166803 CR1-F2 462 + 49166343 49166803 0 2 127,333, 0,127, +,+, 785273 LINE CR1 960 chrZ 49173977 49175668 CR1-F 90 + 49173977 49175668 0 2 616,882, 0,809, +,+, 785286 LINE CR1 960 chrZ 49179612 49180519 GGLTR12B 792 - 49179612 49180519 0 2 213,677, 0,230, -,-, 785292 LTR ERVL 960 chrZ 49181900 49183069 CR1-H 814 - 49181900 49183069 0 2 1002,167, 0,1002, -,-, 785294 LINE CR1 960 chrZ 49208862 49211004 GGERVL-B-int 336 + 49208862 49211004 0 2 836,184, 0,1958, +,+, 785329 LTR ERVL 960 chrZ 49214027 49214709 GGLTR8B 197 - 49214027 49214709 0 2 174,257, 0,425, -,-, 785336 LTR ERVL 960 chrZ 49215393 49216161 CR1-C3 631 - 49215393 49216161 0 2 114,654, 0,114, -,-, 785338 LINE CR1 960 chrZ 49224340 49227410 CR1-F2 627 + 49224340 49227410 0 2 1606,934, 0,2136, +,+, 785351 LINE CR1 960 chrZ 49231474 49238006 GGLTR10C2 886 + 49231474 49238006 0 3 364,5801,364, 0,364,6168, +,+,+, 785361 LTR ERVK 960 chrZ 49247933 49249863 CR1-D2 633 - 49247933 49249863 0 2 505,213, 0,1717, -,-, 785376 LINE CR1 960 chrZ 49261775 49262539 GGLTR12C 460 - 49261775 49262539 0 2 169,99, 0,665, -,-, 785384 LTR ERVL 960 chrZ 49264383 49264997 CR1-C3 597 - 49264383 49264997 0 2 470,144, 0,470, -,-, 785391 LINE CR1 960 chrZ 49278911 49283004 CR1-C4 334 - 49278911 49283004 0 2 51,300, 0,3793, -,-, 785411 LINE CR1 960 chrZ 49278976 49282701 Char12Mar1_GG 539 - 49278976 49282701 0 3 689,233,330, 0,2390,3395, -,-,-, 785412 DNA hAT-Charlie 14 chrZ 49283009 49283872 GGLTR12C 632 - 49283009 49283872 0 2 213,650, 0,213, -,-, 785415 LTR ERVL 961 chrZ 49296923 49299709 CR1-Y 627 + 49296923 49299709 0 2 925,1850, 0,936, +,+, 785431 LINE CR1 961 chrZ 49300852 49302146 CR1-C4 515 + 49300852 49302146 0 2 1010,284, 0,1010, +,+, 785433 LINE CR1 961 chrZ 49303289 49304865 GGLTR10C2 823 + 49303289 49304865 0 3 360,1177,39, 0,360,1537, +,+,+, 785435 LTR ERVK 961 chrZ 49306474 49308035 CR1-G 637 + 49306474 49308035 0 2 291,1270, 0,291, +,+, 785438 LINE CR1 961 chrZ 49325637 49325813 Z-REP 10 - 49325637 49325813 0 2 42,92, 0,84, -,-, 785461 Satellite macro 961 chrZ 49337125 49339246 CR1-F2 397 - 49337125 49339246 0 2 630,1469, 0,652, -,-, 785480 LINE CR1 961 chrZ 49358367 49362710 CR1-Y 503 - 49358367 49362710 0 2 1808,956, 0,3387, -,-, 785512 LINE CR1 961 chrZ 49364860 49365881 CR1-F2 428 + 49364860 49365881 0 3 462,145,407, 0,469,614, +,+,+, 785517 LINE CR1 961 chrZ 49385377 49385462 A-rich 502 + 49385377 49385462 0 2 13,30, 0,55, +,+, 785546 Low_complexity Low_complexity 961 chrZ 49385844 49387097 CR1-E 328 - 49385844 49387097 0 2 246,347, 0,906, -,-, 785549 LINE CR1 961 chrZ 49394014 49394845 CR1-E 683 - 49394014 49394845 0 3 343,206,191, 0,350,640, -,-,-, 785564 LINE CR1 962 chrZ 49421224 49422238 GGLTR3B2 623 + 49421224 49422238 0 2 38,504, 0,510, +,+, 785607 LTR ERVL 962 chrZ 49423234 49424988 CR1-C4 495 + 49423234 49424988 0 2 901,756, 0,998, +,+, 785611 LINE CR1 962 chrZ 49430733 49432678 CR1-G 269 - 49430733 49432678 0 2 381,109, 0,1836, -,-, 785620 LINE CR1 962 chrZ 49431121 49432570 GGLTR10C-int 573 + 49431121 49432570 0 3 376,389,684, 0,376,765, +,+,+, 785621 LTR ERVK 962 chrZ 49433596 49436228 GGERV20_I-int 603 + 49433596 49436228 0 4 1697,793,78,45, 0,1697,2508,2587, +,+,+,+, 785624 LTR ERVL 962 chrZ 49441771 49442722 GGLTR7-int 308 + 49441771 49442722 0 2 345,508, 0,443, +,+, 785628 LTR ERV1 962 chrZ 49454931 49455841 REP131 202 - 49454931 49455841 0 2 207,128, 0,782, -,-, 785641 DNA? DNA? 962 chrZ 49467535 49472177 ENS1-LTR 969 - 49467535 49472177 0 3 915,2808,915, 0,915,3727, -,-,-, 785654 LTR ERVL 962 chrZ 49474121 49479128 GGERVL18-int 677 - 49474121 49479128 0 3 288,3922,796, 0,288,4211, -,-,-, 785657 LTR ERVL 962 chrZ 49485997 49487959 CR1-Y2_Aves 220 - 49485997 49487959 0 3 257,302,221, 0,1417,1741, -,-,-, 785663 LINE CR1 962 chrZ 49492646 49494822 CR1-X1 341 - 49492646 49494822 0 3 407,1500,263, 0,407,1913, -,-,-, 785671 LINE CR1 962 chrZ 49506777 49508978 CR1-C3 587 + 49506777 49508978 0 3 66,1295,115, 0,644,2086, +,+,+, 785679 LINE CR1 962 chrZ 49515829 49516170 Eulor8 341 - 49515829 49516170 0 2 215,110, 0,231, -,-, 785698 DNA TcMar? 962 chrZ 49518439 49519336 CR1-X2 676 + 49518439 49519336 0 2 248,47, 0,850, +,+, 785701 LINE CR1 963 chrZ 49557180 49558419 CR1-C4 608 - 49557180 49558419 0 2 253,398, 0,841, -,-, 785743 LINE CR1 963 chrZ 49560679 49561348 CR1-Y1_Aves 456 - 49560679 49561348 0 2 527,139, 0,530, -,-, 785747 LINE CR1 963 chrZ 49567432 49567892 (GAAAA)n 881 + 49567432 49567892 0 2 175,265, 0,195, +,+, 785753 Simple_repeat Simple_repeat 963 chrZ 49570071 49572815 CR1-X2 307 + 49570071 49572815 0 2 1731,166, 0,2578, +,+, 785756 LINE CR1 963 chrZ 49582158 49584566 CR1-Y4 460 + 49582158 49584566 0 4 249,354,177,328, 0,1098,1890,2080, +,+,+,+, 785767 LINE CR1 963 chrZ 49613343 49614055 GGLTR5B 621 - 49613343 49614055 0 2 179,365, 0,347, -,-, 785804 LTR ERVL 963 chrZ 49639696 49640301 CR1-11_Crp 188 - 49639696 49640301 0 2 197,270, 0,335, -,-, 785830 LINE CR1 120 chrZ 49660782 49676291 Char12Mar1_GG 554 - 49660782 49676291 0 2 542,43, 0,15466, -,-, 785845 DNA hAT-Charlie 963 chrZ 49664445 49669504 CR1-X2 538 - 49664445 49669504 0 4 839,774,80,277, 0,839,3047,4782, -,-,-,-, 785854 LINE CR1 963 chrZ 49666058 49667486 GGLTR8A 324 + 49666058 49667486 0 2 266,409, 0,1019, +,+, 785855 LTR ERVL 964 chrZ 49679978 49681089 CR1-Y2 562 + 49679978 49681089 0 3 271,102,200, 0,809,911, +,+,+, 785867 LINE CR1 964 chrZ 49695968 49696779 GGLTR8B 312 + 49695968 49696779 0 2 220,543, 0,268, +,+, 785879 LTR ERVL 964 chrZ 49718635 49720019 CR1-F2 450 - 49718635 49720019 0 2 252,1126, 0,258, -,-, 785901 LINE CR1 964 chrZ 49721361 49721465 (AAAC)n 864 + 49721361 49721465 0 2 31,23, 0,81, +,+, 785903 Simple_repeat Simple_repeat 964 chrZ 49736699 49737486 CR1-C4 404 + 49736699 49737486 0 2 518,269, 0,518, +,+, 785914 LINE CR1 964 chrZ 49748169 49749585 GGLTR8B 264 + 49748169 49749585 0 3 184,195,267, 0,917,1149, +,+,+, 785926 LTR ERVL 964 chrZ 49758862 49765111 CR1-H 708 + 49758862 49765111 0 2 736,1465, 0,4784, +,+, 785937 LINE CR1 964 chrZ 49759836 49760895 ENS1-LTR 425 - 49759836 49760895 0 2 494,435, 0,624, -,-, 785939 LTR ERVL 964 chrZ 49770160 49771114 CR1-E 406 + 49770160 49771114 0 2 778,174, 0,780, +,+, 785941 LINE CR1 965 chrZ 49828477 49829327 GGLTR8B 247 - 49828477 49829327 0 2 255,441, 0,409, -,-, 785997 LTR ERVL 965 chrZ 49858124 49858835 CR1-C4 536 - 49858124 49858835 0 2 176,285, 0,426, -,-, 786020 LINE CR1 965 chrZ 49887626 49888507 CR1-Y1_Aves 431 - 49887626 49888507 0 2 604,275, 0,606, -,-, 786042 LINE CR1 965 chrZ 49931702 49932878 CR1-F2 467 - 49931702 49932878 0 2 218,852, 0,324, -,-, 786076 LINE CR1 966 chrZ 49989648 49990361 CR1-Y4 530 - 49989648 49990361 0 2 418,258, 0,455, -,-, 786116 LINE CR1 966 chrZ 49993962 49994056 A-rich 686 + 49993962 49994056 0 2 29,34, 0,60, +,+, 786120 Low_complexity Low_complexity 966 chrZ 50007049 50007359 GGLTR6 662 + 50007049 50007359 0 2 93,214, 0,96, +,+, 786133 LTR ERVL 966 chrZ 50008621 50009243 GGLTR8B 460 + 50008621 50009243 0 2 139,479, 0,143, +,+, 786135 LTR ERVL 966 chrZ 50047851 50048986 CR1-F2 530 + 50047851 50048986 0 2 309,826, 0,309, +,+, 786156 LINE CR1 967 chrZ 50094904 50095644 CR1-C4 526 + 50094904 50095644 0 2 187,377, 0,363, +,+, 786184 LINE CR1 967 chrZ 50098900 50099494 CR1-E 406 - 50098900 50099494 0 2 90,504, 0,90, -,-, 786188 LINE CR1 967 chrZ 50180721 50182189 CR1-D 545 - 50180721 50182189 0 2 1206,127, 0,1341, -,-, 786243 LINE CR1 968 chrZ 50227915 50233715 CR1-Y3 617 + 50227915 50233715 0 2 2770,713, 0,5087, +,+, 786277 LINE CR1 968 chrZ 50237593 50238068 TguLTR5e 291 - 50237593 50238068 0 2 138,248, 0,227, -,-, 786282 LTR ERVL 968 chrZ 50252909 50253889 Char12Mar1_GG 498 - 50252909 50253889 0 2 83,276, 0,704, -,-, 786298 DNA hAT-Charlie 968 chrZ 50252995 50253610 CR1-F2 621 + 50252995 50253610 0 2 386,229, 0,386, +,+, 786299 LINE CR1 968 chrZ 50284655 50285469 CR1-Y2_Aves 59 + 50284655 50285469 0 2 194,474, 0,340, +,+, 786307 LINE CR1 968 chrZ 50322488 50322709 CR1-Y1_Aves 544 - 50322488 50322709 0 2 65,139, 0,82, -,-, 786349 LINE CR1 969 chrZ 50348593 50349718 CR1-D2 558 + 50348593 50349718 0 2 244,106, 0,1019, +,+, 786371 LINE CR1 969 chrZ 50355414 50365298 Char12Mar1_GG 593 - 50355414 50365298 0 2 57,607, 0,9277, -,-, 786380 DNA hAT-Charlie 969 chrZ 50356807 50357333 GGERVL-C-int 368 - 50356807 50357333 0 2 389,137, 0,389, -,-, 786383 LTR ERVL 969 chrZ 50365414 50366766 CR1-C2 733 + 50365414 50366766 0 2 792,49, 0,1303, +,+, 786390 LINE CR1 969 chrZ 50396766 50399973 Charlie12_GG 408 - 50396766 50399973 0 2 2024,255, 0,2952, -,-, 786416 DNA hAT-Charlie 969 chrZ 50403800 50405432 CR1-X2 343 - 50403800 50405432 0 2 451,1181, 0,451, -,-, 786422 LINE CR1 969 chrZ 50448519 50449680 CR1-X2 446 - 50448519 50449680 0 2 697,410, 0,751, -,-, 786451 LINE CR1 970 chrZ 50466447 50466955 TguLTR5e 274 - 50466447 50466955 0 2 135,352, 0,156, -,-, 786459 LTR ERVL 970 chrZ 50480933 50483813 GGERVL-B-int 219 - 50480933 50483813 0 3 1435,484,267, 0,1932,2613, -,-,-, 786472 LTR ERVL 970 chrZ 50496927 50499606 CR1-C4 618 - 50496927 50499606 0 3 786,549,124, 0,787,2555, -,-,-, 786484 LINE CR1 970 chrZ 50528705 50530676 CR1-C 809 + 50528705 50530676 0 2 584,844, 0,1127, +,+, 786510 LINE CR1 970 chrZ 50535399 50537876 CR1-Y1_Aves 353 + 50535399 50537876 0 2 1569,212, 0,2265, +,+, 786516 LINE CR1 970 chrZ 50544178 50546927 GGLTR5A 241 - 50544178 50546927 0 2 75,350, 0,2399, -,-, 786522 LTR ERVL 970 chrZ 50589800 50590563 CR1-E 230 + 50589800 50590563 0 2 78,645, 0,118, +,+, 786565 LINE CR1 971 chrZ 50639934 50642085 CR1-X1 524 - 50639934 50642085 0 2 345,1792, 0,359, -,-, 786608 LINE CR1 971 chrZ 50642087 50644059 CR1-X1 439 - 50642087 50644059 0 3 384,819,150, 0,963,1822, -,-,-, 786609 LINE CR1 971 chrZ 50722587 50723997 CR1-E 647 - 50722587 50723997 0 3 586,156,615, 0,639,795, -,-,-, 786680 LINE CR1 972 chrZ 50737760 50739680 CR1-X2 211 + 50737760 50739680 0 2 418,352, 0,1568, +,+, 786688 LINE CR1 972 chrZ 50756305 50757372 Char12Mar1_GG 542 - 50756305 50757372 0 2 756,302, 0,765, -,-, 786702 DNA hAT-Charlie 972 chrZ 50760105 50762541 CR1-C4 545 - 50760105 50762541 0 2 762,1674, 0,762, -,-, 786704 LINE CR1 972 chrZ 50777534 50778710 CR1-X1 624 + 50777534 50778710 0 2 478,48, 0,1128, +,+, 786719 LINE CR1 972 chrZ 50778013 50778617 CR1-C4 544 + 50778013 50778617 0 2 544,60, 0,544, +,+, 786720 LINE CR1 972 chrZ 50799063 50799153 (A)n 883 + 50799063 50799153 0 2 22,28, 0,62, +,+, 786737 Simple_repeat Simple_repeat 972 chrZ 50802220 50805020 CR1-F 414 + 50802220 50805020 0 3 540,427,1775, 0,598,1025, +,+,+, 786740 LINE CR1 972 chrZ 50817956 50819416 CR1-D2 586 + 50817956 50819416 0 2 447,1013, 0,447, +,+, 786758 LINE CR1 972 chrZ 50821972 50822029 (CCG)n 386 + 50821972 50822029 0 2 6,6, 0,51, +,+, 786761 Simple_repeat Simple_repeat 973 chrZ 50858975 50865408 GGLTR11-int 378 - 50858975 50865408 0 5 239,470,203,1189,354, 0,3704,4174,4889,6079, -,-,-,-,-, 786790 LTR ERV1 973 chrZ 50886114 50887264 CR1-D2 622 - 50886114 50887264 0 3 132,133,868, 0,138,282, -,-,-, 786820 LINE CR1 973 chrZ 50892407 50892943 CR1-C2 632 - 50892407 50892943 0 2 58,109, 0,427, -,-, 786827 LINE CR1 973 chrZ 50894886 50896244 CR1-Y4 485 + 50894886 50896244 0 2 696,662, 0,696, +,+, 786830 LINE CR1 973 chrZ 50907233 50907334 CR1-X2 700 + 50907233 50907334 0 2 51,43, 0,58, +,+, 786838 LINE CR1 973 chrZ 50922013 50922583 CR1-Y 559 + 50922013 50922583 0 2 439,122, 0,448, +,+, 786853 LINE CR1 973 chrZ 50946815 50947257 GGLTR8B 426 - 50946815 50947257 0 2 249,156, 0,286, -,-, 786879 LTR ERVL 974 chrZ 51007071 51010004 CR1-X2 519 + 51007071 51010004 0 3 267,841,192, 0,1077,2741, +,+,+, 786944 LINE CR1 974 chrZ 51007328 51008142 CR1-B2 761 - 51007328 51008142 0 2 407,407, 0,407, -,-, 786945 LINE CR1 974 chrZ 51014263 51014314 (ATTTATT)n 444 + 51014263 51014314 0 2 15,6, 0,45, +,+, 786950 Simple_repeat Simple_repeat 974 chrZ 51014995 51015636 CR1-X 199 + 51014995 51015636 0 2 366,121, 0,520, +,+, 786952 LINE CR1 974 chrZ 51017977 51018890 CR1-Y4 364 - 51017977 51018890 0 2 274,639, 0,274, -,-, 786960 LINE CR1 974 chrZ 51031990 51032820 GGLTR3C2 374 - 51031990 51032820 0 2 174,334, 0,496, -,-, 786972 LTR ERVL 974 chrZ 51044493 51045890 Char12Mar1_GG 482 + 51044493 51045890 0 2 927,411, 0,986, +,+, 786991 DNA hAT-Charlie 974 chrZ 51055089 51056063 CR1-F2 451 + 51055089 51056063 0 2 766,207, 0,767, +,+, 787005 LINE CR1 974 chrZ 51064016 51065962 GGERV28_I-int 321 + 51064016 51065962 0 2 528,120, 0,1826, +,+, 787013 LTR ERVK 974 chrZ 51077693 51078079 (GGAA)n 891 + 51077693 51078079 0 2 180,190, 0,196, +,+, 787031 Simple_repeat Simple_repeat 974 chrZ 51080425 51082162 CR1-F2 561 + 51080425 51082162 0 2 280,758, 0,979, +,+, 787034 LINE CR1 974 chrZ 51099998 51100142 A-rich 533 + 51099998 51100142 0 2 42,39, 0,105, +,+, 787063 Low_complexity Low_complexity 974 chrZ 51116169 51116626 TguLTR5e 193 - 51116169 51116626 0 3 22,261,134, 0,38,323, -,-,-, 787086 LTR ERVL 975 chrZ 51123511 51124299 Char12Mar1_GG 659 - 51123511 51124299 0 3 160,197,80, 0,233,708, -,-,-, 787092 DNA hAT-Charlie 975 chrZ 51138092 51139863 CR1-D 678 + 51138092 51139863 0 2 1469,302, 0,1469, +,+, 787110 LINE CR1 975 chrZ 51146028 51147582 CR1-C2 765 + 51146028 51147582 0 2 252,421, 0,1133, +,+, 787116 LINE CR1 975 chrZ 51146281 51147161 GGLTR12C 612 - 51146281 51147161 0 2 214,649, 0,231, -,-, 787117 LTR ERVL 975 chrZ 51148701 51149417 CR1-Y2_Aves 176 + 51148701 51149417 0 2 500,171, 0,545, +,+, 787119 LINE CR1 975 chrZ 51156930 51157336 GGLTR5A 323 + 51156930 51157336 0 2 218,121, 0,285, +,+, 787130 LTR ERVL 975 chrZ 51178321 51179504 CR1-E 644 - 51178321 51179504 0 2 851,330, 0,853, -,-, 787147 LINE CR1 975 chrZ 51215197 51217341 CR1-F 374 + 51215197 51217341 0 2 181,1938, 0,206, +,+, 787179 LINE CR1 975 chrZ 51219603 51221409 CR1-F2 443 + 51219603 51221409 0 3 336,965,389, 0,452,1417, +,+,+, 787181 LINE CR1 975 chrZ 51221834 51222844 CR1-Y2_Aves 141 + 51221834 51222844 0 2 92,343, 0,667, +,+, 787183 LINE CR1 975 chrZ 51229042 51229612 CR1-Y 389 + 51229042 51229612 0 2 94,467, 0,103, +,+, 787190 LINE CR1 975 chrZ 51245538 51246292 CR1-F2 592 - 51245538 51246292 0 2 335,419, 0,335, -,-, 787213 LINE CR1 975 chrZ 51246503 51248416 CR1-C4 542 + 51246503 51248416 0 2 44,1869, 0,44, +,+, 787214 LINE CR1 976 chrZ 51249521 51251906 CR1-F 481 + 51249521 51251906 0 2 514,695, 0,1690, +,+, 787215 LINE CR1 976 chrZ 51262575 51263390 Char12Mar1_GG 702 - 51262575 51263390 0 2 358,205, 0,610, -,-, 787236 DNA hAT-Charlie 977 chrZ 51389270 51390098 CR1-F2 427 + 51389270 51390098 0 2 606,222, 0,606, +,+, 787329 LINE CR1 977 chrZ 51404985 51405567 TguLTR5e 254 + 51404985 51405567 0 2 267,161, 0,421, +,+, 787336 LTR ERVL 977 chrZ 51449213 51449437 Charlie12_GG 444 + 51449213 51449437 0 2 47,116, 0,108, +,+, 787376 DNA hAT-Charlie 977 chrZ 51467548 51469168 CR1-X2 467 + 51467548 51469168 0 2 168,1108, 0,512, +,+, 787389 LINE CR1 977 chrZ 51474354 51474408 (AACACAA)n 574 + 51474354 51474408 0 2 11,10, 0,44, +,+, 787395 Simple_repeat Simple_repeat 977 chrZ 51497273 51497509 GGLTR9 541 + 51497273 51497509 0 2 92,95, 0,141, +,+, 787409 LTR ERVL 977 chrZ 51509857 51509970 A-rich 530 + 51509857 51509970 0 2 39,48, 0,65, +,+, 787412 Low_complexity Low_complexity 978 chrZ 51522491 51523353 GGLTR8B 239 + 51522491 51523353 0 2 357,225, 0,637, +,+, 787424 LTR ERVL 978 chrZ 51523436 51523474 A-rich 451 + 51523436 51523474 0 2 33,5, 0,33, +,+, 787425 Low_complexity Low_complexity 978 chrZ 51586392 51587672 GGERV20_I-int 586 - 51586392 51587672 0 2 65,1215, 0,65, -,-, 787459 LTR ERVL 978 chrZ 51640967 51641538 GGLTR5A 361 + 51640967 51641538 0 2 304,148, 0,423, +,+, 787495 LTR ERVL 979 chrZ 51659104 51659839 CR1-Y2_Aves 165 - 51659104 51659839 0 3 244,335,83, 0,270,652, -,-,-, 787506 LINE CR1 979 chrZ 51661002 51665041 CR1-F2 495 + 51661002 51665041 0 2 180,54, 0,3985, +,+, 787508 LINE CR1 979 chrZ 51665942 51667620 CR1-C4 456 + 51665942 51667620 0 2 1264,414, 0,1264, +,+, 787517 LINE CR1 979 chrZ 51694043 51697132 CR1-D2 551 - 51694043 51697132 0 2 842,2246, 0,843, -,-, 787533 LINE CR1 979 chrZ 51704557 51704632 (CGCCAC)n 362 + 51704557 51704632 0 2 23,28, 0,47, +,+, 787542 Simple_repeat Simple_repeat 979 chrZ 51742940 51744195 CR1-Y2_Aves 240 - 51742940 51744195 0 2 528,723, 0,532, -,-, 787568 LINE CR1 979 chrZ 51746363 51748180 CR1-Y2_Aves 55 + 51746363 51748180 0 2 486,501, 0,1316, +,+, 787570 LINE CR1 979 chrZ 51746881 51747678 CR1-H 771 - 51746881 51747678 0 2 752,45, 0,752, -,-, 787571 LINE CR1 979 chrZ 51766849 51767640 CR1-D2 515 - 51766849 51767640 0 2 653,138, 0,653, -,-, 787578 LINE CR1 980 chrZ 51781565 51785961 CR1-C4 571 - 51781565 51785961 0 2 336,1459, 0,2937, -,-, 787587 LINE CR1 980 chrZ 51805804 51806921 CR1-C4 550 - 51805804 51806921 0 2 146,971, 0,146, -,-, 787602 LINE CR1 980 chrZ 51840268 51841202 CR1-Y2_Aves 352 - 51840268 51841202 0 2 439,111, 0,823, -,-, 787622 LINE CR1 980 chrZ 51884246 51884756 CR1-X2 267 + 51884246 51884756 0 2 370,111, 0,399, +,+, 787649 LINE CR1 980 chrZ 51885329 51886078 CR1-X2 537 - 51885329 51886078 0 2 215,533, 0,216, -,-, 787650 LINE CR1 980 chrZ 51886149 51886763 CR1-F 244 + 51886149 51886763 0 2 412,160, 0,454, +,+, 787651 LINE CR1 981 chrZ 51915688 51919537 CR1-C4 461 - 51915688 51919537 0 4 198,1963,797,203, 0,198,2821,3646, -,-,-,-, 787672 LINE CR1 981 chrZ 51936765 51937792 CR1-Y2_Aves 220 - 51936765 51937792 0 3 127,615,84, 0,282,943, -,-,-, 787688 LINE CR1 981 chrZ 51957063 51957178 (T)n 687 + 51957063 51957178 0 2 27,44, 0,71, +,+, 787703 Simple_repeat Simple_repeat 981 chrZ 51976479 51977049 CR1-Y4 595 - 51976479 51977049 0 2 160,60, 0,510, -,-, 787714 LINE CR1 981 chrZ 52002543 52003764 Char12Mar1_GG 490 - 52002543 52003764 0 2 597,478, 0,743, -,-, 787728 DNA hAT-Charlie 981 chrZ 52024564 52026880 CR1-F2 475 + 52024564 52026880 0 2 1354,609, 0,1707, +,+, 787742 LINE CR1 982 chrZ 52072119 52074879 CR1-Y 520 - 52072119 52074879 0 2 1824,936, 0,1824, -,-, 787762 LINE CR1 982 chrZ 52103119 52104670 CR1-Y1_Aves 473 + 52103119 52104670 0 2 1257,78, 0,1473, +,+, 787787 LINE CR1 982 chrZ 52120602 52122024 CR1-X 426 + 52120602 52122024 0 6 72,66,117,711,32,302, 0,75,144,261,1045,1120, +,+,+,+,+,+, 787795 LINE CR1 982 chrZ 52142502 52148306 GGERV20_I-int 449 + 52142502 52148306 0 5 3044,1502,331,35,106, 0,3571,5073,5662,5698, +,+,+,+,+, 787811 LTR ERVL 983 chrZ 52169243 52170393 CR1-C3 626 - 52169243 52170393 0 2 608,542, 0,608, -,-, 787826 LINE CR1 983 chrZ 52204123 52205623 GGLTR5B 461 + 52204123 52205623 0 2 336,263, 0,1237, +,+, 787855 LTR ERVL 983 chrZ 52204462 52205361 CR1-C3 609 - 52204462 52205361 0 2 585,314, 0,585, -,-, 787856 LINE CR1 983 chrZ 52207502 52211178 CR1-Y4 539 + 52207502 52211178 0 4 159,630,1091,121, 0,159,793,3555, +,+,+,+, 787860 LINE CR1 983 chrZ 52223585 52225482 CR1-C3 596 + 52223585 52225482 0 2 1001,363, 0,1534, +,+, 787879 LINE CR1 983 chrZ 52292816 52292874 (CT)n 484 + 52292816 52292874 0 2 24,11, 0,47, +,+, 787923 Simple_repeat Simple_repeat 984 chrZ 52300928 52302186 CR1-H2 331 + 52300928 52302186 0 2 822,317, 0,941, +,+, 787931 LINE CR1 984 chrZ 52334864 52335505 GGLTR11-int 445 - 52334864 52335505 0 2 228,108, 0,533, -,-, 787948 LTR ERV1 984 chrZ 52344034 52344797 CR1-X1 497 - 52344034 52344797 0 2 580,177, 0,586, -,-, 787956 LINE CR1 984 chrZ 52347050 52347725 GGLTR8A 266 - 52347050 52347725 0 2 216,287, 0,388, -,-, 787960 LTR ERVL 984 chrZ 52351923 52352540 CR1-C4 488 + 52351923 52352540 0 2 437,180, 0,437, +,+, 787963 LINE CR1 985 chrZ 52447065 52448259 CR1-C4 582 + 52447065 52448259 0 2 1119,14, 0,1180, +,+, 788023 LINE CR1 985 chrZ 52453560 52456140 CR1-Y2_Aves 298 + 52453560 52456140 0 3 438,451,1265, 0,864,1315, +,+,+, 788029 LINE CR1 985 chrZ 52454000 52454410 GGLTR12C 612 - 52454000 52454410 0 2 173,232, 0,178, -,-, 788030 LTR ERVL 985 chrZ 52460855 52461744 CR1-D 611 - 52460855 52461744 0 2 85,776, 0,113, -,-, 788034 LINE CR1 985 chrZ 52462071 52462774 CR1-D 703 - 52462071 52462774 0 2 60,643, 0,60, -,-, 788036 LINE CR1 985 chrZ 52479302 52479667 GGLTR8A 502 - 52479302 52479667 0 2 226,100, 0,265, -,-, 788052 LTR ERVL 985 chrZ 52541033 52547470 CR1-H2 510 + 52541033 52547470 0 2 1877,74, 0,6363, +,+, 788091 LINE CR1 985 chrZ 52552749 52555822 CR1-B 643 - 52552749 52555822 0 2 2621,452, 0,2621, -,-, 788096 LINE CR1 986 chrZ 52589143 52589313 GGLTR8A 539 - 52589143 52589313 0 2 81,89, 0,81, -,-, 788117 LTR ERVL 986 chrZ 52638130 52640295 Charlie12_GG 561 - 52638130 52640295 0 2 76,2063, 0,102, -,-, 788150 DNA hAT-Charlie 986 chrZ 52647055 52647123 (T)n 1000 + 52647055 52647123 0 2 19,23, 0,45, +,+, 788159 Simple_repeat Simple_repeat 986 chrZ 52653386 52653745 TguLTR5e 372 + 52653386 52653745 0 2 63,206, 0,153, +,+, 788163 LTR ERVL 986 chrZ 52663788 52664216 CR1-D2 717 + 52663788 52664216 0 2 281,147, 0,281, +,+, 788173 LINE CR1 986 chrZ 52673977 52675530 CR1-C4 532 + 52673977 52675530 0 3 407,115,796, 0,407,757, +,+,+, 788186 LINE CR1 986 chrZ 52681286 52682662 GGERVL-B-int 173 + 52681286 52682662 0 2 856,263, 0,1113, +,+, 788192 LTR ERVL 123 chrZ 52690508 52695240 CR1-C4 614 + 52690508 52695240 0 2 1274,2630, 0,2102, +,+, 788203 LINE CR1 987 chrZ 52697456 52698150 CR1-X 639 + 52697456 52698150 0 3 126,78,112, 0,504,582, +,+,+, 788204 LINE CR1 987 chrZ 52734261 52735144 GGLTR8B 289 - 52734261 52735144 0 3 172,244,256, 0,344,627, -,-,-, 788224 LTR ERVL 987 chrZ 52743883 52745626 CR1-Y3 645 - 52743883 52745626 0 2 683,1060, 0,683, -,-, 788226 LINE CR1 987 chrZ 52781926 52782527 CR1-Y2_Aves 128 - 52781926 52782527 0 2 270,195, 0,406, -,-, 788244 LINE CR1 987 chrZ 52793930 52794604 CR1-C 780 - 52793930 52794604 0 2 270,404, 0,270, -,-, 788251 LINE CR1 987 chrZ 52803817 52805264 CR1-H 317 + 52803817 52805264 0 2 665,267, 0,1180, +,+, 788258 LINE CR1 988 chrZ 52916962 52918955 CR1-H 743 - 52916962 52918955 0 2 906,1087, 0,906, -,-, 788349 LINE CR1 989 chrZ 52955867 52957460 CR1-L3A_Croc 186 - 52955867 52957460 0 2 184,858, 0,735, -,-, 788366 LINE CR1 989 chrZ 52968357 52969745 CR1-C 755 - 52968357 52969745 0 2 1021,367, 0,1021, -,-, 788372 LINE CR1 989 chrZ 53012974 53013635 GGLTR5B 436 - 53012974 53013635 0 2 372,212, 0,449, -,-, 788397 LTR ERVL 989 chrZ 53014790 53015607 CR1-C4 568 + 53014790 53015607 0 2 452,365, 0,452, +,+, 788400 LINE CR1 989 chrZ 53021320 53021860 Charlie12_GGa 572 - 53021320 53021860 0 2 192,344, 0,196, -,-, 788404 DNA hAT-Charlie 990 chrZ 53088841 53089312 CR1-L3B_Croc 220 + 53088841 53089312 0 2 106,365, 0,106, +,+, 788453 LINE CR1 990 chrZ 53100407 53101083 CR1-Y1_Aves 414 - 53100407 53101083 0 2 143,466, 0,210, -,-, 788456 LINE CR1 990 chrZ 53143014 53143341 CR1-Y2_Aves 323 - 53143014 53143341 0 2 117,210, 0,117, -,-, 788485 LINE CR1 990 chrZ 53147743 53148987 CR1-X2 634 + 53147743 53148987 0 2 134,61, 0,1183, +,+, 788489 LINE CR1 991 chrZ 53291558 53293891 CR1-Y2_Aves 275 + 53291558 53293891 0 2 164,711, 0,1622, +,+, 788599 LINE CR1 991 chrZ 53298978 53299680 CR1-Y4 526 + 53298978 53299680 0 2 507,181, 0,521, +,+, 788606 LINE CR1 991 chrZ 53337407 53339203 CR1-C4 556 + 53337407 53339203 0 2 1338,458, 0,1338, +,+, 788628 LINE CR1 123 chrZ 53345678 53346889 CR1-C2 809 - 53345678 53346889 0 3 156,350,326, 0,156,885, -,-,-, 788633 LINE CR1 992 chrZ 53347797 53350644 CR1-F 437 - 53347797 53350644 0 2 1241,1310, 0,1537, -,-, 788635 LINE CR1 992 chrZ 53354326 53355446 CR1-X1 527 + 53354326 53355446 0 2 1039,45, 0,1075, +,+, 788637 LINE CR1 992 chrZ 53365131 53365927 CR1-Y1_Aves 455 - 53365131 53365927 0 2 431,363, 0,433, -,-, 788644 LINE CR1 992 chrZ 53396836 53399937 CR1-C4 477 + 53396836 53399937 0 2 154,144, 0,2957, +,+, 788661 LINE CR1 992 chrZ 53423667 53424173 Char12Mar1_GG 616 - 53423667 53424173 0 2 202,160, 0,346, -,-, 788667 DNA hAT-Charlie 992 chrZ 53426266 53427374 CR1-C4 487 + 53426266 53427374 0 2 593,511, 0,597, +,+, 788669 LINE CR1 993 chrZ 53510071 53510922 CR1-F2 420 + 53510071 53510922 0 2 12,749, 0,102, +,+, 788723 LINE CR1 994 chrZ 53645058 53645246 (CCG)n 629 + 53645058 53645246 0 2 72,53, 0,135, +,+, 788792 Simple_repeat Simple_repeat 995 chrZ 53741444 53741488 (TTTC)n 450 + 53741444 53741488 0 2 9,13, 0,31, +,+, 788854 Simple_repeat Simple_repeat 995 chrZ 53746913 53747657 CR1-Y2_Aves 153 + 53746913 53747657 0 2 167,284, 0,460, +,+, 788858 LINE CR1 995 chrZ 53773138 53773703 CR1-C3 534 - 53773138 53773703 0 2 457,108, 0,457, -,-, 788869 LINE CR1 995 chrZ 53782777 53782833 (ATTATT)n 540 + 53782777 53782833 0 2 14,6, 0,50, +,+, 788874 Simple_repeat Simple_repeat 995 chrZ 53798185 53799063 Char12Mar1_GG 518 - 53798185 53799063 0 2 443,434, 0,444, -,-, 788888 DNA hAT-Charlie 995 chrZ 53815568 53818564 CR1-F 396 - 53815568 53818564 0 2 1647,1349, 0,1647, -,-, 788894 LINE CR1 995 chrZ 53849232 53850207 CR1-Y1_Aves 401 + 53849232 53850207 0 2 545,425, 0,550, +,+, 788914 LINE CR1 996 chrZ 53871692 53871859 CR1-X1 645 - 53871692 53871859 0 2 47,120, 0,47, -,-, 788935 LINE CR1 996 chrZ 53887844 53887902 (AATAAGA)n 556 + 53887844 53887902 0 2 6,7, 0,51, +,+, 788951 Simple_repeat Simple_repeat 996 chrZ 53961106 53961143 (AAC)n 506 + 53961106 53961143 0 2 6,6, 0,31, +,+, 788989 Simple_repeat Simple_repeat 998 chrZ 54171355 54173061 CR1-D 702 + 54171355 54173061 0 3 336,229,1123, 0,354,583, +,+,+, 789107 LINE CR1 998 chrZ 54218009 54218320 CR1-X1 681 - 54218009 54218320 0 2 212,99, 0,212, -,-, 789127 LINE CR1 998 chrZ 54224730 54225673 Mariner1_GG 448 - 54224730 54225673 0 2 406,533, 0,410, -,-, 789132 DNA TcMar-Mariner 999 chrZ 54338128 54339323 CR1-Y2_Aves 438 + 54338128 54339323 0 2 631,58, 0,1137, +,+, 789204 LINE CR1 1000 chrZ 54398946 54399603 CR1-C4 565 + 54398946 54399603 0 2 387,220, 0,437, +,+, 789255 LINE CR1 1000 chrZ 54461135 54462348 CR1-C2 596 - 54461135 54462348 0 2 117,1096, 0,117, -,-, 789298 LINE CR1 1000 chrZ 54478166 54479303 CR1-E 471 - 54478166 54479303 0 2 214,115, 0,1022, -,-, 789308 LINE CR1 1001 chrZ 54570410 54571090 CR1-Y1_Aves 410 - 54570410 54571090 0 2 385,91, 0,589, -,-, 789363 LINE CR1 1001 chrZ 54592571 54594441 CR1-Y2_Aves 150 - 54592571 54594441 0 2 1562,156, 0,1714, -,-, 789372 LINE CR1 1003 chrZ 54837136 54837315 Char12Mar1_GG 608 - 54837136 54837315 0 2 139,40, 0,139, -,-, 789460 DNA hAT-Charlie 1003 chrZ 54857832 54861031 CR1-E 773 + 54857832 54861031 0 2 1110,1434, 0,1765, +,+, 789474 LINE CR1 1003 chrZ 54882090 54884290 CR1-Y 491 + 54882090 54884290 0 3 58,1557,49, 0,594,2151, +,+,+, 789492 LINE CR1 1003 chrZ 54910860 54912322 CR1-Y3 494 - 54910860 54912322 0 2 72,879, 0,583, -,-, 789513 LINE CR1 1003 chrZ 54915053 54916248 Char12Mar1_GG 541 - 54915053 54916248 0 3 652,200,117, 0,666,1078, -,-,-, 789515 DNA hAT-Charlie 1004 chrZ 54926274 54926635 CR1-C4 516 - 54926274 54926635 0 2 225,127, 0,234, -,-, 789523 LINE CR1 1004 chrZ 54954114 54955141 CR1-C2 659 - 54954114 54955141 0 2 218,179, 0,848, -,-, 789545 LINE CR1 1004 chrZ 54974438 54975024 CR1-F2 531 + 54974438 54975024 0 2 67,519, 0,67, +,+, 789559 LINE CR1 1004 chrZ 54989793 54991625 CR1-X 518 + 54989793 54991625 0 5 440,225,128,775,229, 0,440,665,820,1603, +,+,+,+,+, 789565 LINE CR1 1004 chrZ 55023174 55024042 GGLTR5A 332 - 55023174 55024042 0 2 161,223, 0,645, -,-, 789582 LTR ERVL 1004 chrZ 55034085 55034137 (TTATCTA)n 470 + 55034085 55034137 0 2 8,12, 0,40, +,+, 789590 Simple_repeat Simple_repeat 1004 chrZ 55046142 55047019 CR1-Y4 154 - 55046142 55047019 0 2 568,104, 0,773, -,-, 789601 LINE CR1 1005 chrZ 55125661 55125716 (AATA)n 570 + 55125661 55125716 0 2 9,11, 0,44, +,+, 789645 Simple_repeat Simple_repeat 1006 chrZ 55223670 55225970 Char12Mar1_GG 531 - 55223670 55225970 0 3 1126,175,70, 0,1971,2230, -,-,-, 789722 DNA hAT-Charlie 1006 chrZ 55232940 55233394 CR1-L3A_Croc 60 - 55232940 55233394 0 2 86,331, 0,123, -,-, 789729 LINE CR1 1006 chrZ 55235865 55236951 CR1-D2 688 + 55235865 55236951 0 2 545,157, 0,929, +,+, 789735 LINE CR1 1006 chrZ 55259251 55259916 CR1-C 913 - 55259251 55259916 0 2 502,161, 0,504, -,-, 789753 LINE CR1 1006 chrZ 55261497 55263965 X2_LINE 229 - 55261497 55263965 0 2 142,301, 0,2167, -,-, 789757 LINE CR1 1006 chrZ 55277454 55277566 (T)n 716 + 55277454 55277566 0 2 19,56, 0,56, +,+, 789770 Simple_repeat Simple_repeat 1006 chrZ 55293498 55293814 CR1-Y1_Aves 428 - 55293498 55293814 0 2 118,198, 0,118, -,-, 789782 LINE CR1 1007 chrZ 55415344 55415860 CR1-X2 570 - 55415344 55415860 0 2 248,247, 0,269, -,-, 789868 LINE CR1 1009 chrZ 55632210 55633512 CR1-Y1_Aves 411 + 55632210 55633512 0 2 603,148, 0,1154, +,+, 790019 LINE CR1 1009 chrZ 55659462 55659778 CR1-D2 498 - 55659462 55659778 0 2 99,176, 0,140, -,-, 790035 LINE CR1 1009 chrZ 55674965 55675666 CR1-F2 627 + 55674965 55675666 0 2 178,523, 0,178, +,+, 790046 LINE CR1 1009 chrZ 55680010 55680582 CR1-C4 623 - 55680010 55680582 0 2 336,230, 0,342, -,-, 790049 LINE CR1 1009 chrZ 55688200 55688281 A-rich 376 + 55688200 55688281 0 2 36,22, 0,59, +,+, 790057 Low_complexity Low_complexity 1010 chrZ 55722928 55723010 (TGT)n 308 + 55722928 55723010 0 2 10,15, 0,67, +,+, 790078 Simple_repeat Simple_repeat 1010 chrZ 55778714 55779524 CR1-Y4 306 + 55778714 55779524 0 2 692,115, 0,695, +,+, 790105 LINE CR1 1010 chrZ 55818885 55818953 (T)n 856 + 55818885 55818953 0 2 24,25, 0,43, +,+, 790134 Simple_repeat Simple_repeat 1011 chrZ 55853803 55853930 CR1-Y1_Aves 548 - 55853803 55853930 0 2 52,58, 0,69, -,-, 790153 LINE CR1 1011 chrZ 55859952 55863721 CR1-C4 492 - 55859952 55863721 0 2 1170,1855, 0,1914, -,-, 790156 LINE CR1 1011 chrZ 55874700 55874978 CR1-X 641 - 55874700 55874978 0 2 95,99, 0,179, -,-, 790164 LINE CR1 1012 chrZ 55979633 55980985 CR1-Y2_Aves 150 + 55979633 55980985 0 2 168,1147, 0,205, +,+, 790228 LINE CR1 1012 chrZ 55995682 55997879 CR1-C 848 + 55995682 55997879 0 2 1495,702, 0,1495, +,+, 790244 LINE CR1 1012 chrZ 56005478 56006880 CR1-E 464 + 56005478 56006880 0 3 283,558,106, 0,529,1296, +,+,+, 790251 LINE CR1 1012 chrZ 56010605 56011770 CR1-C3 572 - 56010605 56011770 0 2 770,255, 0,910, -,-, 790257 LINE CR1 1012 chrZ 56020816 56021086 CR1-Y2_Aves 463 + 56020816 56021086 0 2 182,55, 0,215, +,+, 790264 LINE CR1 1012 chrZ 56039420 56040038 CR1-Y1_Aves 312 - 56039420 56040038 0 2 233,198, 0,420, -,-, 790281 LINE CR1 1012 chrZ 56065506 56065609 GGLTR8B 512 - 56065506 56065609 0 2 54,49, 0,54, -,-, 790308 LTR ERVL 1013 chrZ 56128424 56128781 CR1-F2 584 + 56128424 56128781 0 2 216,141, 0,216, +,+, 790317 LINE CR1 1013 chrZ 56193793 56194438 CR1-Y 695 + 56193793 56194438 0 2 49,509, 0,136, +,+, 790368 LINE CR1 1013 chrZ 56194436 56195089 CR1-D 822 - 56194436 56195089 0 2 501,94, 0,559, -,-, 790370 LINE CR1 1013 chrZ 56222690 56225115 CR1-F2 512 - 56222690 56225115 0 2 869,1553, 0,872, -,-, 790392 LINE CR1 1014 chrZ 56247278 56247547 CR1-D 237 + 56247278 56247547 0 2 63,134, 0,135, +,+, 790402 LINE CR1 1014 chrZ 56248215 56250239 CR1-Y 729 + 56248215 56250239 0 3 423,1230,371, 0,423,1653, +,+,+, 790404 LINE CR1 1014 chrZ 56253591 56254877 CR1-F2 287 + 56253591 56254877 0 2 55,539, 0,747, +,+, 790408 LINE CR1 1014 chrZ 56262284 56268526 CR1-C4 474 + 56262284 56268526 0 2 1146,132, 0,6110, +,+, 790419 LINE CR1 1014 chrZ 56293280 56295582 GGLTR8A 576 - 56293280 56295582 0 2 442,141, 0,2161, -,-, 790431 LTR ERVL 1014 chrZ 56293716 56295364 CR1-G 854 + 56293716 56295364 0 2 462,871, 0,777, +,+, 790432 LINE CR1 1014 chrZ 56313608 56315908 CR1-F2 598 - 56313608 56315908 0 2 845,204, 0,2096, -,-, 790444 LINE CR1 1014 chrZ 56327743 56328222 CR1-C4 612 + 56327743 56328222 0 2 258,221, 0,258, +,+, 790449 LINE CR1 1015 chrZ 56421935 56422055 A-rich 360 + 56421935 56422055 0 2 69,12, 0,108, +,+, 790506 Low_complexity Low_complexity 1015 chrZ 56442861 56443547 CR1-L3B_Croc 168 + 56442861 56443547 0 2 151,228, 0,458, +,+, 790519 LINE CR1 1015 chrZ 56451614 56452158 CR1-X1 446 - 56451614 56452158 0 2 451,91, 0,453, -,-, 790525 LINE CR1 1015 chrZ 56466104 56466825 CR1-C4 409 + 56466104 56466825 0 2 496,225, 0,496, +,+, 790547 LINE CR1 1016 chrZ 56497388 56497563 CR1-D 763 - 56497388 56497563 0 2 54,121, 0,54, -,-, 790564 LINE CR1 1016 chrZ 56544632 56545545 CR1-C4 478 - 56544632 56545545 0 2 361,552, 0,361, -,-, 790598 LINE CR1 1016 chrZ 56616044 56616642 GGLTR5B 488 + 56616044 56616642 0 2 483,88, 0,510, +,+, 790640 LTR ERVL 1017 chrZ 56638400 56641175 CR1-F2 533 + 56638400 56641175 0 3 1765,722,285, 0,1768,2490, +,+,+, 790652 LINE CR1 1017 chrZ 56742311 56743103 CR1-C4 556 - 56742311 56743103 0 2 427,365, 0,427, -,-, 790704 LINE CR1 127 chrZ 56752000 56755448 CR1-H 617 + 56752000 56755448 0 2 2622,826, 0,2622, +,+, 790714 LINE CR1 1018 chrZ 56816068 56816846 CR1-Y2_Aves 241 + 56816068 56816846 0 2 198,430, 0,348, +,+, 790741 LINE CR1 1018 chrZ 56816863 56818054 CR1-D 594 + 56816863 56818054 0 2 540,281, 0,910, +,+, 790743 LINE CR1 1018 chrZ 56838295 56839825 CR1-Y1_Aves 446 + 56838295 56839825 0 2 1093,430, 0,1100, +,+, 790760 LINE CR1 1018 chrZ 56858599 56860621 CR1-C4 564 - 56858599 56860621 0 3 506,759,754, 0,506,1268, -,-,-, 790773 LINE CR1 1019 chrZ 56915844 56916768 CR1-Y2_Aves 145 + 56915844 56916768 0 2 205,719, 0,205, +,+, 790819 LINE CR1 1019 chrZ 56925187 56925305 (A)n 772 + 56925187 56925305 0 2 33,46, 0,72, +,+, 790824 Simple_repeat Simple_repeat 1019 chrZ 56953693 56957189 CR1-F2 533 + 56953693 56957189 0 3 1238,1382,876, 0,1238,2620, +,+,+, 790853 LINE CR1 1019 chrZ 56981559 56982394 CR1-X2 351 - 56981559 56982394 0 2 764,59, 0,776, -,-, 790871 LINE CR1 1020 chrZ 57106486 57106832 CR1-X1 491 - 57106486 57106832 0 2 159,187, 0,159, -,-, 790963 LINE CR1 1021 chrZ 57151953 57152907 CR1-C4 548 - 57151953 57152907 0 2 66,845, 0,109, -,-, 790998 LINE CR1 1021 chrZ 57179716 57180229 (TTAGGG)n 449 + 57179716 57180229 0 2 303,210, 0,303, +,+, 791012 Simple_repeat Simple_repeat 1021 chrZ 57240694 57241130 CR1-D2 610 - 57240694 57241130 0 2 145,291, 0,145, -,-, 791056 LINE CR1 1021 chrZ 57253407 57254418 CR1-Y4 346 - 57253407 57254418 0 2 181,804, 0,207, -,-, 791064 LINE CR1 1022 chrZ 57281475 57288488 GGERVL-A-int 724 + 57281475 57288488 0 4 502,5899,52,500, 0,504,6461,6513, +,+,+,+, 791082 LTR ERVL 1022 chrZ 57293386 57296700 CR1-E 739 - 57293386 57296700 0 2 2707,344, 0,2970, -,-, 791085 LINE CR1 1022 chrZ 57296098 57296351 GGLTR3A 879 - 57296098 57296351 0 2 76,177, 0,76, -,-, 791086 LTR ERVL 1022 chrZ 57315329 57317242 CR1-X2 214 + 57315329 57317242 0 3 551,505,747, 0,573,1166, +,+,+, 791095 LINE CR1 1022 chrZ 57333229 57334616 CR1-C2 525 + 57333229 57334616 0 3 679,130,542, 0,679,845, +,+,+, 791107 LINE CR1 1022 chrZ 57349219 57350634 CR1-F2 892 - 57349219 57350634 0 2 205,645, 0,770, -,-, 791121 LINE CR1 1022 chrZ 57383569 57384902 CR1-E 255 + 57383569 57384902 0 2 302,998, 0,335, +,+, 791143 LINE CR1 1023 chrZ 57463431 57463835 Char12Mar1_GG 585 - 57463431 57463835 0 2 251,17, 0,387, -,-, 791188 DNA hAT-Charlie 1023 chrZ 57485833 57486736 CR1-L3B_Croc 337 - 57485833 57486736 0 3 455,102,44, 0,682,859, -,-,-, 791200 LINE CR1 1024 chrZ 57573409 57575533 CR1-F2 855 - 57573409 57575533 0 2 959,1165, 0,959, -,-, 791269 LINE CR1 1024 chrZ 57589942 57590333 CR1-C4 475 - 57589942 57590333 0 2 267,121, 0,270, -,-, 791277 LINE CR1 1024 chrZ 57603814 57604369 CR1-Y1_Aves 329 - 57603814 57604369 0 2 64,262, 0,293, -,-, 791285 LINE CR1 1024 chrZ 57615093 57615480 Char12Mar1_GG 750 - 57615093 57615480 0 2 98,289, 0,98, -,-, 791291 DNA hAT-Charlie 1024 chrZ 57622065 57623082 CR1-C4 479 + 57622065 57623082 0 2 427,200, 0,817, +,+, 791297 LINE CR1 1024 chrZ 57622492 57622882 GGLTR3B2 723 - 57622492 57622882 0 2 155,231, 0,159, -,-, 791298 LTR ERVL 1024 chrZ 57630251 57632012 CR1-C4 467 - 57630251 57632012 0 3 66,1191,138, 0,432,1623, -,-,-, 791301 LINE CR1 1024 chrZ 57636409 57640495 CR1-F2 549 + 57636409 57640495 0 2 2008,123, 0,3963, +,+, 791307 LINE CR1 1025 chrZ 57739595 57740444 CR1-D2 539 - 57739595 57740444 0 2 693,156, 0,693, -,-, 791372 LINE CR1 1025 chrZ 57746461 57747404 CR1-Y1_Aves 126 + 57746461 57747404 0 2 135,746, 0,197, +,+, 791374 LINE CR1 1025 chrZ 57757434 57759506 CR1-C3 571 - 57757434 57759506 0 3 594,1341,137, 0,594,1935, -,-,-, 791378 LINE CR1 1027 chrZ 57986157 57986951 CR1-X1 510 - 57986157 57986951 0 2 659,115, 0,679, -,-, 791535 LINE CR1 1027 chrZ 58042189 58043139 CR1-X 554 + 58042189 58043139 0 2 454,496, 0,454, +,+, 791572 LINE CR1 1028 chrZ 58089534 58091779 CR1-X 593 + 58089534 58091779 0 2 141,50, 0,2195, +,+, 791601 LINE CR1 1028 chrZ 58090475 58091433 CR1-D2 622 - 58090475 58091433 0 2 263,138, 0,820, -,-, 791602 LINE CR1 1028 chrZ 58090738 58091295 GGLTR3C2 542 + 58090738 58091295 0 2 18,513, 0,44, +,+, 791603 LTR ERVL 1028 chrZ 58097067 58097747 Mariner1_GG 604 - 58097067 58097747 0 2 489,191, 0,489, -,-, 791610 DNA TcMar-Mariner 1028 chrZ 58125154 58126120 CR1-C 826 + 58125154 58126120 0 2 511,419, 0,547, +,+, 791639 LINE CR1 1028 chrZ 58126422 58126944 GGLTR5B 437 - 58126422 58126944 0 2 183,45, 0,477, -,-, 791641 LTR ERVL 1028 chrZ 58139802 58142224 CR1-F2 396 + 58139802 58142224 0 2 711,255, 0,2167, +,+, 791653 LINE CR1 1028 chrZ 58140520 58141957 CR1-C3 708 - 58140520 58141957 0 2 942,462, 0,975, -,-, 791655 LINE CR1 1028 chrZ 58153787 58156497 CR1-C2 438 + 58153787 58156497 0 2 172,333, 0,2377, +,+, 791664 LINE CR1 1028 chrZ 58161923 58162746 CR1-X2 692 + 58161923 58162746 0 2 77,411, 0,412, +,+, 791667 LINE CR1 1028 chrZ 58176884 58177502 GGLTR5A 353 - 58176884 58177502 0 2 180,398, 0,220, -,-, 791678 LTR ERVL 1028 chrZ 58178784 58180027 CR1-Y4 571 + 58178784 58180027 0 2 542,206, 0,1037, +,+, 791680 LINE CR1 1029 chrZ 58224257 58224301 (TTCTTT)n 694 + 58224257 58224301 0 2 10,6, 0,38, +,+, 791705 Simple_repeat Simple_repeat 1029 chrZ 58262719 58263357 CR1-11_Crp 300 + 58262719 58263357 0 2 229,224, 0,414, +,+, 791717 LINE CR1 1029 chrZ 58302611 58305997 CR1-L3B_Croc 261 - 58302611 58305997 0 3 266,229,892, 0,2092,2494, -,-,-, 791744 LINE CR1 1030 chrZ 58365996 58366134 GA-rich 66 + 58365996 58366134 0 2 49,59, 0,79, +,+, 791782 Low_complexity Low_complexity 1030 chrZ 58451975 58452986 CR1-X2 243 - 58451975 58452986 0 3 718,109,158, 0,728,853, -,-,-, 791888 LINE CR1 1031 chrZ 58522865 58524421 CR1-Y4 453 - 58522865 58524421 0 2 472,1081, 0,475, -,-, 791924 LINE CR1 1031 chrZ 58561186 58561670 CR1-Y2_Aves 224 + 58561186 58561670 0 2 178,127, 0,357, +,+, 791953 LINE CR1 1031 chrZ 58584575 58586876 CR1-C4 585 + 58584575 58586876 0 3 1309,582,410, 0,1309,1891, +,+,+, 791965 LINE CR1 1032 chrZ 58607250 58608180 CR1-Y4 496 - 58607250 58608180 0 2 591,333, 0,597, -,-, 791977 LINE CR1 1032 chrZ 58643195 58644469 Mariner1_GG 524 - 58643195 58644469 0 2 388,426, 0,848, -,-, 791995 DNA TcMar-Mariner 1033 chrZ 58729844 58730744 REP131 401 - 58729844 58730744 0 2 77,249, 0,651, -,-, 792047 DNA? DNA? 1033 chrZ 58733281 58734105 CR1-H 861 - 58733281 58734105 0 2 556,266, 0,558, -,-, 792050 LINE CR1 1033 chrZ 58799227 58802943 CR1-F2 593 - 58799227 58802943 0 2 939,1937, 0,1779, -,-, 792097 LINE CR1 1033 chrZ 58805127 58805933 CR1-D2 548 - 58805127 58805933 0 2 246,560, 0,246, -,-, 792099 LINE CR1 1033 chrZ 58826347 58826537 A-rich 471 + 58826347 58826537 0 2 142,30, 0,160, +,+, 792123 Low_complexity Low_complexity 1033 chrZ 58835635 58836976 Charlie12_GG 594 - 58835635 58836976 0 2 268,477, 0,864, -,-, 792133 DNA hAT-Charlie 1034 chrZ 58865874 58867037 CR1-D2 601 - 58865874 58867037 0 2 591,572, 0,591, -,-, 792157 LINE CR1 1034 chrZ 58875298 58876184 CR1-X1 456 - 58875298 58876184 0 2 349,537, 0,349, -,-, 792167 LINE CR1 1034 chrZ 58882591 58882923 GGERV28_I-int 278 - 58882591 58882923 0 2 140,77, 0,255, -,-, 792175 LTR ERVK 1034 chrZ 58917980 58920793 Charlie12_GG 474 - 58917980 58920793 0 2 625,1459, 0,1354, -,-, 792204 DNA hAT-Charlie 1034 chrZ 58944214 58944546 CR1-C2 790 + 58944214 58944546 0 2 207,125, 0,207, +,+, 792224 LINE CR1 1034 chrZ 58956840 58956891 A-rich 396 + 58956840 58956891 0 2 15,11, 0,40, +,+, 792239 Low_complexity Low_complexity 1035 chrZ 59023865 59024412 CR1-E 611 + 59023865 59024412 0 2 413,134, 0,413, +,+, 792301 LINE CR1 1035 chrZ 59038611 59039603 CR1-C4 559 + 59038611 59039603 0 2 790,198, 0,794, +,+, 792309 LINE CR1 1035 chrZ 59053147 59055570 CR1-C2 611 + 59053147 59055570 0 4 64,671,15,158, 0,342,2196,2265, +,+,+,+, 792318 LINE CR1 1035 chrZ 59062706 59065491 CR1-H 762 + 59062706 59065491 0 2 1198,1567, 0,1218, +,+, 792325 LINE CR1 1035 chrZ 59069754 59071100 CR1-B 864 + 59069754 59071100 0 2 148,1198, 0,148, +,+, 792330 LINE CR1 1035 chrZ 59076868 59078275 GGERVL18-int 580 + 59076868 59078275 0 3 314,775,317, 0,314,1090, +,+,+, 792335 LTR ERVL 1035 chrZ 59092854 59094461 ENS1B-LTR 562 + 59092854 59094461 0 2 47,731, 0,876, +,+, 792352 LTR ERVL 1035 chrZ 59095808 59097909 CR1-F 353 - 59095808 59097909 0 2 920,1135, 0,966, -,-, 792354 LINE CR1 1036 chrZ 59125713 59126518 CR1-Y2_Aves 359 + 59125713 59126518 0 2 472,176, 0,629, +,+, 792387 LINE CR1 1037 chrZ 59259438 59259770 CR1-Y1_Aves 410 + 59259438 59259770 0 2 163,166, 0,166, +,+, 792493 LINE CR1 1038 chrZ 59380306 59381532 CR1-X 436 - 59380306 59381532 0 2 1011,215, 0,1011, -,-, 792597 LINE CR1 1038 chrZ 59449086 59450136 CR1-X1 472 + 59449086 59450136 0 2 627,423, 0,627, +,+, 792649 LINE CR1 1039 chrZ 59560471 59561787 CR1-X2 520 - 59560471 59561787 0 2 1099,213, 0,1103, -,-, 792724 LINE CR1 1039 chrZ 59586184 59587425 CR1-E 698 - 59586184 59587425 0 2 482,124, 0,1117, -,-, 792738 LINE CR1 1039 chrZ 59592927 59593493 TguLTR5e 343 + 59592927 59593493 0 2 191,130, 0,436, +,+, 792742 LTR ERVL 1039 chrZ 59595449 59596198 GGLTR12C 468 + 59595449 59596198 0 2 116,255, 0,494, +,+, 792746 LTR ERVL 1040 chrZ 59692446 59692905 Mariner1b_GG 521 - 59692446 59692905 0 2 321,126, 0,333, -,-, 792805 DNA TcMar-Mariner 1040 chrZ 59702618 59704324 CR1-Y1_Aves 452 + 59702618 59704324 0 2 248,784, 0,922, +,+, 792809 LINE CR1 1040 chrZ 59710400 59713866 CR1-F2 370 - 59710400 59713866 0 2 283,240, 0,3226, -,-, 792814 LINE CR1 1040 chrZ 59728545 59730728 CR1-F2 505 - 59728545 59730728 0 2 417,1753, 0,430, -,-, 792831 LINE CR1 1040 chrZ 59758218 59759844 CR1-F2 566 - 59758218 59759844 0 2 242,467, 0,1159, -,-, 792849 LINE CR1 1040 chrZ 59766906 59767022 (AT)n 607 + 59766906 59767022 0 2 62,37, 0,79, +,+, 792859 Simple_repeat Simple_repeat 1041 chrZ 59821531 59823271 GGERV20_I-int 376 + 59821531 59823271 0 2 552,1188, 0,552, +,+, 792892 LTR ERVL 1042 chrZ 59919166 59921121 CR1-X 432 - 59919166 59921121 0 2 1695,260, 0,1695, -,-, 792974 LINE CR1 1042 chrZ 59981254 59981947 GGLTR8A 393 - 59981254 59981947 0 2 203,476, 0,217, -,-, 793030 LTR ERVL 1042 chrZ 59994666 59997445 CR1-Y4 447 - 59994666 59997445 0 3 1044,69,1137, 0,1054,1642, -,-,-, 793046 LINE CR1 1042 chrZ 60005836 60006624 CR1-E 676 + 60005836 60006624 0 2 267,521, 0,267, +,+, 793056 LINE CR1 1042 chrZ 60021485 60023357 CR1-E 708 + 60021485 60023357 0 2 82,1171, 0,701, +,+, 793072 LINE CR1 1042 chrZ 60025812 60026333 CR1-Y2_Aves 218 + 60025812 60026333 0 2 257,210, 0,311, +,+, 793074 LINE CR1 1043 chrZ 60037355 60043374 CR1-C4 555 - 60037355 60043374 0 2 290,831, 0,5188, -,-, 793083 LINE CR1 1043 chrZ 60037646 60039005 CR1-G 470 + 60037646 60039005 0 2 200,797, 0,562, +,+, 793084 LINE CR1 1043 chrZ 60038993 60042530 CR1-C 630 + 60038993 60042530 0 2 362,2610, 0,927, +,+, 793086 LINE CR1 1043 chrZ 60086997 60088131 GGLTR5A 419 + 60086997 60088131 0 2 369,191, 0,943, +,+, 793132 LTR ERVL 1043 chrZ 60106072 60106442 CR1-Y2_Aves 296 + 60106072 60106442 0 2 136,234, 0,136, +,+, 793149 LINE CR1 1043 chrZ 60112088 60112642 CR1-D2 487 - 60112088 60112642 0 2 109,445, 0,109, -,-, 793154 LINE CR1 1043 chrZ 60118605 60118930 GGERV10_LTR 689 - 60118605 60118930 0 2 160,63, 0,262, -,-, 793161 LTR ERVL 1043 chrZ 60121894 60123843 CR1-F2 480 - 60121894 60123843 0 3 173,1340,436, 0,173,1513, -,-,-, 793166 LINE CR1 1044 chrZ 60181471 60183295 Char12Mar1_GG 460 - 60181471 60183295 0 2 1049,341, 0,1483, -,-, 793222 DNA hAT-Charlie 1044 chrZ 60215394 60215997 CR1-11_Crp 298 + 60215394 60215997 0 2 268,143, 0,460, +,+, 793251 LINE CR1 1044 chrZ 60235692 60238255 Mariner1b_GG 606 - 60235692 60238255 0 2 333,202, 0,2361, -,-, 793264 DNA TcMar-Mariner 1044 chrZ 60236022 60238037 CR1-F 504 - 60236022 60238037 0 2 1332,682, 0,1333, -,-, 793265 LINE CR1 1044 chrZ 60242775 60244295 GGLTR5B 550 + 60242775 60244295 0 3 297,159,97, 0,1230,1423, +,+,+, 793269 LTR ERVL 1044 chrZ 60281146 60282087 CR1-D2 574 - 60281146 60282087 0 2 143,798, 0,143, -,-, 793295 LINE CR1 1045 chrZ 60296865 60297218 Char12Mar1_GG 717 - 60296865 60297218 0 3 143,49,101, 0,195,252, -,-,-, 793305 DNA hAT-Charlie 1045 chrZ 60305331 60305432 (A)n 863 + 60305331 60305432 0 2 48,20, 0,81, +,+, 793311 Simple_repeat Simple_repeat 1045 chrZ 60324248 60325367 UCON20 268 + 60324248 60325367 0 2 149,105, 0,1014, +,+, 793322 Unknown Unknown 1046 chrZ 60490210 60491146 GGLTR5B 550 - 60490210 60491146 0 2 89,429, 0,507, -,-, 793454 LTR ERVL 1046 chrZ 60505550 60509105 CR1-X2 437 - 60505550 60509105 0 2 72,269, 0,3286, -,-, 793474 LINE CR1 1046 chrZ 60544365 60546302 CR1-L3B_Croc 113 + 60544365 60546302 0 2 958,333, 0,1604, +,+, 793498 LINE CR1 1047 chrZ 60558668 60559301 CR1-Y4 656 + 60558668 60559301 0 2 50,583, 0,50, +,+, 793511 LINE CR1 1047 chrZ 60567948 60569377 CR1-Y3 511 + 60567948 60569377 0 2 442,987, 0,442, +,+, 793521 LINE CR1 1047 chrZ 60684869 60685393 CR1-C2 515 - 60684869 60685393 0 3 180,63,132, 0,181,392, -,-,-, 793608 LINE CR1 1048 chrZ 60730992 60731574 ENS1-LTR 915 + 60730992 60731574 0 2 415,167, 0,415, +,+, 793641 LTR ERVL 1048 chrZ 60775827 60775888 (TTTTG)n 528 + 60775827 60775888 0 2 10,10, 0,51, +,+, 793678 Simple_repeat Simple_repeat 1048 chrZ 60809759 60811201 CR1-G 844 + 60809759 60811201 0 2 1091,126, 0,1316, +,+, 793715 LINE CR1 1049 chrZ 60846290 60851384 CR1-Y 370 - 60846290 60851384 0 2 340,338, 0,4756, -,-, 793761 LINE CR1 1050 chrZ 60992329 60994195 CR1-D 524 - 60992329 60994195 0 3 958,468,155, 0,1243,1711, -,-,-, 793866 LINE CR1 1050 chrZ 61008473 61009660 CR1-F2 468 - 61008473 61009660 0 2 46,1090, 0,97, -,-, 793884 LINE CR1 1050 chrZ 61065262 61066107 CR1-Y2_Aves 131 - 61065262 61066107 0 2 411,394, 0,451, -,-, 793905 LINE CR1 1051 chrZ 61089382 61089806 CR1-Y1_Aves 447 - 61089382 61089806 0 2 142,251, 0,173, -,-, 793925 LINE CR1 1051 chrZ 61097365 61100676 CR1-C4 423 - 61097365 61100676 0 3 204,1156,475, 0,1680,2836, -,-,-, 793931 LINE CR1 1051 chrZ 61120830 61121256 CR1-Y1_Aves 363 + 61120830 61121256 0 2 375,51, 0,375, +,+, 793953 LINE CR1 1051 chrZ 61155037 61155786 GGLTR8A 309 + 61155037 61155786 0 2 429,205, 0,544, +,+, 793978 LTR ERVL 1051 chrZ 61174922 61175359 CR1-Y4 569 - 61174922 61175359 0 2 105,312, 0,125, -,-, 793994 LINE CR1 1051 chrZ 61191385 61194083 CR1-Y4 525 - 61191385 61194083 0 2 1168,135, 0,2563, -,-, 794002 LINE CR1 1051 chrZ 61202308 61204188 CR1-C2 759 + 61202308 61204188 0 3 275,635,422, 0,558,1458, +,+,+, 794013 LINE CR1 1051 chrZ 61207759 61207862 A-rich 531 + 61207759 61207862 0 2 29,47, 0,56, +,+, 794022 Low_complexity Low_complexity 1052 chrZ 61213200 61213829 Char12Mar1_GG 568 - 61213200 61213829 0 2 539,33, 0,596, -,-, 794026 DNA hAT-Charlie 1052 chrZ 61225921 61226820 CR1-X2 170 - 61225921 61226820 0 2 499,400, 0,499, -,-, 794043 LINE CR1 1052 chrZ 61245122 61247192 Char12Mar1_GG 524 - 61245122 61247192 0 3 1083,127,42, 0,1901,2028, -,-,-, 794061 DNA hAT-Charlie 1052 chrZ 61254506 61255854 CR1-H 674 - 61254506 61255854 0 2 290,1058, 0,290, -,-, 794071 LINE CR1 1052 chrZ 61257551 61258856 CR1-F2 547 - 61257551 61258856 0 2 1023,282, 0,1023, -,-, 794073 LINE CR1 1052 chrZ 61262740 61263572 CR1-C4 427 - 61262740 61263572 0 2 694,138, 0,694, -,-, 794078 LINE CR1 1052 chrZ 61267283 61269346 CR1-Y3 559 + 61267283 61269346 0 3 71,126,216, 0,767,1847, +,+,+, 794083 LINE CR1 1052 chrZ 61305622 61306010 CR1-D 652 - 61305622 61306010 0 2 130,258, 0,130, -,-, 794112 LINE CR1 1052 chrZ 61325977 61326943 CR1-F2 400 + 61325977 61326943 0 2 165,71, 0,895, +,+, 794130 LINE CR1 1053 chrZ 61362869 61363255 GGLTR5A 433 - 61362869 61363255 0 2 191,193, 0,193, -,-, 794166 LTR ERVL 1053 chrZ 61374188 61375489 CR1-F2 417 - 61374188 61375489 0 3 465,444,317, 0,467,984, -,-,-, 794176 LINE CR1 1053 chrZ 61428979 61430029 CR1-Y 416 + 61428979 61430029 0 2 156,890, 0,160, +,+, 794224 LINE CR1 1053 chrZ 61430869 61432059 CR1-F2 463 + 61430869 61432059 0 2 335,834, 0,356, +,+, 794226 LINE CR1 1053 chrZ 61441088 61441943 CR1-Y1_Aves 199 - 61441088 61441943 0 2 374,309, 0,546, -,-, 794239 LINE CR1 1053 chrZ 61446625 61447511 GGLTR5A 379 - 61446625 61447511 0 2 111,423, 0,463, -,-, 794244 LTR ERVL 1053 chrZ 61455752 61458640 Char12Mar1_GG 616 - 61455752 61458640 0 3 68,765,142, 0,311,2746, -,-,-, 794255 DNA hAT-Charlie 1053 chrZ 61466170 61467230 CR1-Y1_Aves 325 - 61466170 61467230 0 2 570,470, 0,590, -,-, 794270 LINE CR1 1054 chrZ 61506999 61507917 CR1-Y4 468 + 61506999 61507917 0 2 252,633, 0,285, +,+, 794308 LINE CR1 1054 chrZ 61518547 61518628 (TACTAT)n 362 + 61518547 61518628 0 2 54,8, 0,73, +,+, 794316 Simple_repeat Simple_repeat 1054 chrZ 61567355 61569612 Charlie12_GG 503 + 61567355 61569612 0 2 670,1557, 0,700, +,+, 794358 DNA hAT-Charlie 1054 chrZ 61582454 61583476 Char12Mar1_GG 669 - 61582454 61583476 0 2 117,231, 0,791, -,-, 794371 DNA hAT-Charlie 1054 chrZ 61582836 61583221 (TTCCC)n 889 + 61582836 61583221 0 2 180,181, 0,204, +,+, 794373 Simple_repeat Simple_repeat 1054 chrZ 61595517 61596651 CR1-E 372 - 61595517 61596651 0 2 123,162, 0,972, -,-, 794389 LINE CR1 1055 chrZ 61637965 61638651 CR1-Y1_Aves 269 + 61637965 61638651 0 2 192,491, 0,195, +,+, 794432 LINE CR1 1055 chrZ 61651981 61653083 CR1-F 356 - 61651981 61653083 0 2 859,183, 0,919, -,-, 794446 LINE CR1 1055 chrZ 61663300 61663473 (AT)n 468 + 61663300 61663473 0 2 107,16, 0,157, +,+, 794460 Simple_repeat Simple_repeat 1055 chrZ 61668203 61668915 CR1-Y1_Aves 588 + 61668203 61668915 0 2 629,64, 0,648, +,+, 794464 LINE CR1 1055 chrZ 61685317 61685877 GGLTR3C1 483 - 61685317 61685877 0 2 93,466, 0,94, -,-, 794480 LTR ERVL 1055 chrZ 61710366 61712123 CR1-D2 489 - 61710366 61712123 0 3 197,67,996, 0,200,761, -,-,-, 794517 LINE CR1 1055 chrZ 61713896 61717503 CR1-D2 430 - 61713896 61717503 0 2 268,187, 0,3420, -,-, 794520 LINE CR1 1055 chrZ 61714365 61717229 CR1-B 740 - 61714365 61717229 0 3 2258,149,409, 0,2261,2455, -,-,-, 794522 LINE CR1 1055 chrZ 61722356 61722663 CR1-X1 364 - 61722356 61722663 0 2 257,50, 0,257, -,-, 794528 LINE CR1 1056 chrZ 61744208 61748380 CR1-C4 429 - 61744208 61748380 0 3 860,125,614, 0,860,3558, -,-,-, 794560 LINE CR1 1056 chrZ 61745192 61747768 CR1-Y3 609 + 61745192 61747768 0 2 2059,517, 0,2059, +,+, 794561 LINE CR1 1056 chrZ 61814374 61815570 CR1-D 708 - 61814374 61815570 0 2 745,451, 0,745, -,-, 794636 LINE CR1 1056 chrZ 61819805 61820520 GGLTR12C 417 + 61819805 61820520 0 2 100,208, 0,507, +,+, 794641 LTR ERVL 1057 chrZ 61881689 61884446 CR1-X1 253 + 61881689 61884446 0 3 243,495,267, 0,1972,2490, +,+,+, 794715 LINE CR1 1057 chrZ 61881932 61883675 CR1-C2 626 - 61881932 61883675 0 2 104,115, 0,1628, -,-, 794716 LINE CR1 1057 chrZ 61899661 61901588 CR1-Y3 621 - 61899661 61901588 0 3 922,604,401, 0,922,1526, -,-,-, 794731 LINE CR1 1057 chrZ 61910877 61910929 (AATTTTCT)n 402 + 61910877 61910929 0 2 8,8, 0,44, +,+, 794743 Simple_repeat Simple_repeat 1057 chrZ 61914787 61917066 Char12Mar1_GG 443 - 61914787 61917066 0 3 655,392,315, 0,718,1964, -,-,-, 794749 DNA hAT-Charlie 1057 chrZ 61918502 61919057 CR1-Y2_Aves 272 + 61918502 61919057 0 2 239,316, 0,239, +,+, 794753 LINE CR1 1057 chrZ 61923963 61924297 GGLTR5B 520 - 61923963 61924297 0 2 32,259, 0,75, -,-, 794758 LTR ERVL 1057 chrZ 61952178 61953499 CR1-X 421 + 61952178 61953499 0 2 385,166, 0,1155, +,+, 794788 LINE CR1 1057 chrZ 61953989 61954220 GGLTR8B 332 + 61953989 61954220 0 2 108,72, 0,159, +,+, 794790 LTR ERVL 1058 chrZ 62003165 62004755 Mariner1_GG 484 - 62003165 62004755 0 2 382,340, 0,1250, -,-, 794841 DNA TcMar-Mariner 1058 chrZ 62005689 62006557 CR1-Y4 479 + 62005689 62006557 0 2 322,376, 0,492, +,+, 794845 LINE CR1 1058 chrZ 62009835 62010460 Mariner1_GG 478 + 62009835 62010460 0 2 544,26, 0,599, +,+, 794850 DNA TcMar-Mariner 1058 chrZ 62032702 62033403 GGERVL-A-int 268 - 62032702 62033403 0 2 438,150, 0,551, -,-, 794864 LTR ERVL 1058 chrZ 62074308 62077105 CR1-H 615 - 62074308 62077105 0 3 534,397,1025, 0,540,1772, -,-,-, 794908 LINE CR1 1058 chrZ 62091340 62092184 CR1-C 853 - 62091340 62092184 0 2 508,334, 0,510, -,-, 794925 LINE CR1 1058 chrZ 62098119 62098162 (TTTCTT)n 516 + 62098119 62098162 0 2 12,11, 0,32, +,+, 794928 Simple_repeat Simple_repeat 1058 chrZ 62112458 62113021 GGLTR5A 307 + 62112458 62113021 0 2 368,139, 0,424, +,+, 794945 LTR ERVL 1059 chrZ 62129576 62131270 GGERVL-B-int 178 + 62129576 62131270 0 3 380,173,782, 0,545,912, +,+,+, 794962 LTR ERVL 1059 chrZ 62133273 62135648 GGERVL-C-int 297 + 62133273 62135648 0 3 258,626,374, 0,1375,2001, +,+,+, 794966 LTR ERVL 1059 chrZ 62136022 62136540 TguLTR5e 378 + 62136022 62136540 0 2 144,136, 0,382, +,+, 794970 LTR ERVL 1059 chrZ 62187855 62188744 CR1-C4 370 - 62187855 62188744 0 3 145,108,607, 0,170,282, -,-,-, 795015 LINE CR1 1059 chrZ 62200944 62202035 GGLTR5A 461 - 62200944 62202035 0 3 199,48,224, 0,757,867, -,-,-, 795024 LTR ERVL 1059 chrZ 62206768 62208270 CR1-C4 530 + 62206768 62208270 0 2 92,910, 0,592, +,+, 795031 LINE CR1 1059 chrZ 62206868 62207362 CR1-D2 319 + 62206868 62207362 0 2 234,248, 0,246, +,+, 795032 LINE CR1 1059 chrZ 62211357 62213737 GGERVL-A-int 267 + 62211357 62213737 0 2 324,367, 0,2013, +,+, 795035 LTR ERVL 1059 chrZ 62250494 62253135 CR1-D2 480 - 62250494 62253135 0 4 293,911,392,258, 0,604,1515,2383, -,-,-,-, 795061 LINE CR1 1059 chrZ 62252401 62252877 GGLTR3F2 620 - 62252401 62252877 0 2 216,230, 0,246, -,-, 795063 LTR ERVL 132 chrZ 62258627 62259291 CR1-H 301 - 62258627 62259291 0 2 463,192, 0,472, -,-, 795065 LINE CR1 1060 chrZ 62312958 62314410 CR1-Y3 642 - 62312958 62314410 0 2 454,267, 0,1185, -,-, 795112 LINE CR1 1060 chrZ 62340952 62341762 CR1-E 680 - 62340952 62341762 0 2 323,487, 0,323, -,-, 795130 LINE CR1 1060 chrZ 62347879 62348618 GGLTR5B 583 + 62347879 62348618 0 2 463,96, 0,643, +,+, 795135 LTR ERVL 1061 chrZ 62410094 62410820 CR1-H 761 - 62410094 62410820 0 3 197,210,319, 0,197,407, -,-,-, 795170 LINE CR1 1061 chrZ 62421934 62424917 CR1-C4 457 + 62421934 62424917 0 2 219,2764, 0,219, +,+, 795176 LINE CR1 1061 chrZ 62425652 62426710 CR1-D2 601 - 62425652 62426710 0 2 102,956, 0,102, -,-, 795177 LINE CR1 1061 chrZ 62438931 62441469 CR1-D 513 - 62438931 62441469 0 2 2390,148, 0,2390, -,-, 795184 LINE CR1 1061 chrZ 62453539 62454190 CR1-Y1_Aves 458 - 62453539 62454190 0 2 112,208, 0,443, -,-, 795190 LINE CR1 1061 chrZ 62453652 62453967 CR1-X2 581 - 62453652 62453967 0 2 174,140, 0,175, -,-, 795191 LINE CR1 1061 chrZ 62500000 62502475 CR1-D2 568 - 62500000 62502475 0 2 674,1036, 0,1439, -,-, 795220 LINE CR1 1061 chrZ 62511036 62511430 GGLTR5A 333 - 62511036 62511430 0 2 153,133, 0,261, -,-, 795230 LTR ERVL 1062 chrZ 62530664 62530851 CR1-Y2_Aves 0 + 62530664 62530851 0 2 55,55, 0,132, +,+, 795252 LINE CR1 1062 chrZ 62535932 62537183 CR1-D2 551 + 62535932 62537183 0 2 1165,85, 0,1166, +,+, 795260 LINE CR1 1062 chrZ 62539024 62539340 Char12Mar1_GG 503 - 62539024 62539340 0 2 90,226, 0,90, -,-, 795264 DNA hAT-Charlie 1062 chrZ 62557438 62560888 GGLTR10C1 740 - 62557438 62560888 0 4 358,2540,122,356, 0,358,2972,3094, -,-,-,-, 795278 LTR ERVK 1062 chrZ 62561022 62566172 CR1-C4 516 + 62561022 62566172 0 2 459,115, 0,5035, +,+, 795279 LINE CR1 1062 chrZ 62564120 62566078 CR1-E 779 + 62564120 62566078 0 2 34,462, 0,1496, +,+, 795281 LINE CR1 1062 chrZ 62567874 62570149 CR1-E 768 + 62567874 62570149 0 3 34,443,212, 0,1496,2063, +,+,+, 795284 LINE CR1 1062 chrZ 62571628 62573903 CR1-E 768 + 62571628 62573903 0 3 34,443,212, 0,1496,2063, +,+,+, 795288 LINE CR1 1062 chrZ 62575382 62577657 CR1-E 768 + 62575382 62577657 0 3 34,443,212, 0,1496,2063, +,+,+, 795292 LINE CR1 1062 chrZ 62579136 62581411 CR1-E 768 + 62579136 62581411 0 3 34,443,212, 0,1496,2063, +,+,+, 795296 LINE CR1 1062 chrZ 62582890 62585165 CR1-E 768 + 62582890 62585165 0 3 34,443,212, 0,1496,2063, +,+,+, 795300 LINE CR1 1062 chrZ 62596460 62599937 GGLTR10C1 917 - 62596460 62599937 0 3 364,2730,362, 0,364,3115, -,-,-, 795312 LTR ERVK 1062 chrZ 62639119 62639559 CR1-X1 599 + 62639119 62639559 0 2 134,278, 0,162, +,+, 795344 LINE CR1 1063 chrZ 62691849 62691942 (AATAGA)n 326 + 62691849 62691942 0 2 11,44, 0,49, +,+, 795367 Simple_repeat Simple_repeat 1063 chrZ 62718257 62718310 (CAA)n 432 + 62718257 62718310 0 2 12,10, 0,43, +,+, 795380 Simple_repeat Simple_repeat 1063 chrZ 62743498 62744031 CR1-F2 481 + 62743498 62744031 0 2 53,480, 0,53, +,+, 795391 LINE CR1 1063 chrZ 62755222 62755358 A-rich 630 + 62755222 62755358 0 2 34,39, 0,97, +,+, 795403 Low_complexity Low_complexity 1063 chrZ 62767220 62767582 CR1-F2 635 - 62767220 62767582 0 2 199,163, 0,199, -,-, 795417 LINE CR1 1064 chrZ 62832828 62834074 CR1-C4 501 + 62832828 62834074 0 2 887,359, 0,887, +,+, 795456 LINE CR1 1064 chrZ 62841316 62841671 CR1-Y3 599 + 62841316 62841671 0 2 285,48, 0,307, +,+, 795462 LINE CR1 1065 chrZ 62919084 62920283 CR1-L3B_Croc 61 - 62919084 62920283 0 2 229,297, 0,902, -,-, 795512 LINE CR1 1065 chrZ 62944192 62944259 (GTT)n 460 + 62944192 62944259 0 2 20,7, 0,60, +,+, 795534 Simple_repeat Simple_repeat 1065 chrZ 62951247 62955478 GGERVL18-LTR 837 + 62951247 62955478 0 3 143,3746,341, 0,143,3890, +,+,+, 795546 LTR ERVL 1065 chrZ 62964025 62964822 Char12Mar1_GG 439 - 62964025 62964822 0 3 99,541,139, 0,102,658, -,-,-, 795557 DNA hAT-Charlie 1066 chrZ 63140447 63143844 CR1-C4 491 - 63140447 63143844 0 3 762,285,94, 0,3008,3303, -,-,-, 795694 LINE CR1 1066 chrZ 63174991 63175221 GGLTR8A 487 - 63174991 63175221 0 2 72,158, 0,72, -,-, 795709 LTR ERVL 1067 chrZ 63202575 63203693 CR1-C4 405 + 63202575 63203693 0 2 409,687, 0,431, +,+, 795733 LINE CR1 1067 chrZ 63295738 63296508 CR1-C3 719 - 63295738 63296508 0 2 331,439, 0,331, -,-, 795781 LINE CR1 1068 chrZ 63313208 63314127 CR1-E 757 + 63313208 63314127 0 2 614,305, 0,614, +,+, 795793 LINE CR1 1068 chrZ 63317836 63318752 CR1-Y2_Aves 147 - 63317836 63318752 0 2 640,189, 0,727, -,-, 795795 LINE CR1 1068 chrZ 63329271 63330957 GGLTR8B 429 - 63329271 63330957 0 3 365,101,237, 0,365,1449, -,-,-, 795801 LTR ERVL 1068 chrZ 63342717 63343937 CR1-E 424 + 63342717 63343937 0 2 565,480, 0,740, +,+, 795811 LINE CR1 1068 chrZ 63419835 63421313 CR1-C4 607 + 63419835 63421313 0 2 73,1405, 0,73, +,+, 795855 LINE CR1 1069 chrZ 63451158 63451509 CR1-L3A_Croc 288 + 63451158 63451509 0 2 94,144, 0,207, +,+, 795874 LINE CR1 1069 chrZ 63470591 63471490 REP131 172 - 63470591 63471490 0 2 292,397, 0,502, -,-, 795888 DNA? DNA? 1069 chrZ 63487953 63488001 (ATGAGA)n 474 + 63487953 63488001 0 2 9,7, 0,41, +,+, 795905 Simple_repeat Simple_repeat 1069 chrZ 63527675 63527979 REP131 337 - 63527675 63527979 0 2 64,94, 0,210, -,-, 795938 DNA? DNA? 1069 chrZ 63565573 63565818 Char12Mar1_GG 490 + 63565573 63565818 0 2 15,21, 0,224, +,+, 795967 DNA hAT-Charlie 1070 chrZ 63573834 63576149 Char12Mar1_GG 442 - 63573834 63576149 0 2 1138,308, 0,2007, -,-, 795972 DNA hAT-Charlie 1070 chrZ 63603666 63618287 Char12Mar1_GG 526 - 63603666 63618287 0 2 550,58, 0,14563, -,-, 795989 DNA hAT-Charlie 1070 chrZ 63608811 63609505 CR1-Y2_Aves 217 + 63608811 63609505 0 2 510,159, 0,535, +,+, 795994 LINE CR1 1071 chrZ 63725759 63725831 (TTA)n 302 + 63725759 63725831 0 2 9,27, 0,45, +,+, 796044 Simple_repeat Simple_repeat 1071 chrZ 63744686 63745396 CR1-D 682 + 63744686 63745396 0 2 26,644, 0,66, +,+, 796055 LINE CR1 1071 chrZ 63800366 63800737 GGLTR5A 540 + 63800366 63800737 0 2 259,61, 0,310, +,+, 796080 LTR ERVL 1071 chrZ 63801260 63803103 CR1-C4 552 - 63801260 63803103 0 2 796,450, 0,1393, -,-, 796081 LINE CR1 1072 chrZ 63884674 63886484 CR1-C4 585 - 63884674 63886484 0 3 96,943,106, 0,343,1704, -,-,-, 796127 LINE CR1 1072 chrZ 63911361 63912020 CR1-H2 368 - 63911361 63912020 0 3 16,31,292, 0,241,367, -,-,-, 796151 LINE CR1 1073 chrZ 63981103 63981414 REP131 243 - 63981103 63981414 0 2 90,104, 0,207, -,-, 796188 DNA? DNA? 1073 chrZ 64018859 64018917 (ACACAA)n 440 + 64018859 64018917 0 2 16,23, 0,35, +,+, 796205 Simple_repeat Simple_repeat 1073 chrZ 64075695 64075894 CR1-D2 690 + 64075695 64075894 0 2 134,65, 0,134, +,+, 796239 LINE CR1 1073 chrZ 64075931 64076752 CR1-Y1_Aves 357 + 64075931 64076752 0 2 157,330, 0,491, +,+, 796240 LINE CR1 1073 chrZ 64091330 64091766 CR1-C4 578 - 64091330 64091766 0 2 287,149, 0,287, -,-, 796250 LINE CR1 1074 chrZ 64094689 64095439 CR1-H2 839 - 64094689 64095439 0 2 362,388, 0,362, -,-, 796252 LINE CR1 1074 chrZ 64116572 64118008 CR1-C4 467 + 64116572 64118008 0 4 166,269,552,307, 0,166,440,1129, +,+,+,+, 796264 LINE CR1 1074 chrZ 64124147 64124505 CR1-X2 372 + 64124147 64124505 0 2 132,226, 0,132, +,+, 796270 LINE CR1 1075 chrZ 64256250 64258360 CR1-C4 431 + 64256250 64258360 0 2 1233,299, 0,1811, +,+, 796344 LINE CR1 1075 chrZ 64259566 64260486 CR1-X2 591 + 64259566 64260486 0 3 96,591,147, 0,96,773, +,+,+, 796348 LINE CR1 1075 chrZ 64263548 64264723 CR1-X2 176 + 64263548 64264723 0 3 242,173,741, 0,246,434, +,+,+, 796351 LINE CR1 1075 chrZ 64328695 64329475 CR1-F2 493 + 64328695 64329475 0 2 413,301, 0,479, +,+, 796400 LINE CR1 1076 chrZ 64414242 64414986 CR1-F2 657 - 64414242 64414986 0 2 414,329, 0,415, -,-, 796471 LINE CR1 1076 chrZ 64446297 64446619 GGERV10_LTR 658 - 64446297 64446619 0 2 160,74, 0,248, -,-, 796493 LTR ERVL 1077 chrZ 64500101 64500897 CR1-G 235 + 64500101 64500897 0 2 203,581, 0,215, +,+, 796535 LINE CR1 1077 chrZ 64607979 64609254 CR1-X2 206 - 64607979 64609254 0 3 86,298,187, 0,207,1088, -,-,-, 796618 LINE CR1 1078 chrZ 64619451 64621394 CR1-C 849 + 64619451 64621394 0 2 941,984, 0,959, +,+, 796625 LINE CR1 1078 chrZ 64657045 64662876 GGERV10_LTR 933 - 64657045 64662876 0 3 220,5385,225, 0,220,5606, -,-,-, 796651 LTR ERVL 1078 chrZ 64664817 64666371 ENS3-int 377 - 64664817 64666371 0 2 1183,371, 0,1183, -,-, 796654 LTR ERVL 1078 chrZ 64668940 64669317 GGLTR3C1 514 + 64668940 64669317 0 2 230,122, 0,255, +,+, 796657 LTR ERVL 1078 chrZ 64681418 64685771 Char12Mar1_GG 623 - 64681418 64685771 0 2 287,254, 0,4099, -,-, 796666 DNA hAT-Charlie 1078 chrZ 64742659 64744500 CR1-X2 282 + 64742659 64744500 0 3 399,421,195, 0,1208,1646, +,+,+, 796711 LINE CR1 1079 chrZ 64781921 64785994 CR1-D2 475 + 64781921 64785994 0 2 419,161, 0,3912, +,+, 796740 LINE CR1 1079 chrZ 64788288 64788831 GGLTR5B 610 - 64788288 64788831 0 2 62,448, 0,95, -,-, 796748 LTR ERVL 1079 chrZ 64802221 64803207 GGLTR5B 659 - 64802221 64803207 0 2 400,135, 0,851, -,-, 796760 LTR ERVL 1079 chrZ 64848643 64849249 CR1-D2 728 - 64848643 64849249 0 2 117,489, 0,117, -,-, 796793 LINE CR1 1080 chrZ 64881173 64883922 CR1-X1 470 - 64881173 64883922 0 2 504,370, 0,2379, -,-, 796831 LINE CR1 1080 chrZ 64886749 64887332 CR1-F2 558 - 64886749 64887332 0 2 125,444, 0,139, -,-, 796839 LINE CR1 1080 chrZ 64890352 64890704 Char12Mar1_GG 468 - 64890352 64890704 0 2 247,105, 0,247, -,-, 796845 DNA hAT-Charlie 1080 chrZ 64939714 64944446 CR1-C4 778 + 64939714 64944446 0 2 134,41, 0,4691, +,+, 796880 LINE CR1 1080 chrZ 64964943 64965460 Mariner1_GG 651 - 64964943 64965460 0 2 224,283, 0,234, -,-, 796893 DNA TcMar-Mariner 1080 chrZ 64978172 64980404 ENS1-int 462 + 64978172 64980404 0 3 452,340,879, 0,456,1353, +,+,+, 796903 LTR ERVL 1080 chrZ 65009008 65011346 CR1-X2 529 + 65009008 65011346 0 2 33,73, 0,2265, +,+, 796934 LINE CR1 1081 chrZ 65086168 65086372 (TCTC)n 246 + 65086168 65086372 0 2 26,6, 0,198, +,+, 796964 Simple_repeat Simple_repeat 1082 chrZ 65143826 65144796 CR1-E 769 - 65143826 65144796 0 2 109,861, 0,109, -,-, 797006 LINE CR1 1082 chrZ 65152409 65152735 CR1-C4 537 + 65152409 65152735 0 2 105,221, 0,105, +,+, 797013 LINE CR1 1082 chrZ 65176494 65176843 Char12Mar1_GG 512 - 65176494 65176843 0 2 100,249, 0,100, -,-, 797033 DNA hAT-Charlie 1082 chrZ 65187822 65189962 CR1-Y2_Aves 328 - 65187822 65189962 0 4 355,659,388,93, 0,379,1038,2047, -,-,-,-, 797039 LINE CR1 1082 chrZ 65195985 65197109 Char12Mar1_GG 672 - 65195985 65197109 0 2 61,660, 0,464, -,-, 797044 DNA hAT-Charlie 1082 chrZ 65238145 65242489 CR1-C3 450 - 65238145 65242489 0 2 670,179, 0,4165, -,-, 797072 LINE CR1 1082 chrZ 65268434 65269391 CR1-F 476 - 65268434 65269391 0 2 569,385, 0,572, -,-, 797095 LINE CR1 1083 chrZ 65309918 65312576 CR1-C 671 - 65309918 65312576 0 2 1982,124, 0,2534, -,-, 797131 LINE CR1 1083 chrZ 65319348 65322006 CR1-C 673 - 65319348 65322006 0 2 1982,124, 0,2534, -,-, 797139 LINE CR1 1083 chrZ 65328775 65331433 CR1-C 674 - 65328775 65331433 0 2 1982,124, 0,2534, -,-, 797147 LINE CR1 1083 chrZ 65338203 65340861 CR1-C 672 - 65338203 65340861 0 2 1982,124, 0,2534, -,-, 797155 LINE CR1 1083 chrZ 65347636 65350294 CR1-C 671 - 65347636 65350294 0 2 1982,124, 0,2534, -,-, 797163 LINE CR1 1083 chrZ 65370284 65372969 Char12Mar1_GG 524 - 65370284 65372969 0 3 71,201,61, 0,662,2624, -,-,-, 797180 DNA hAT-Charlie 1083 chrZ 65370358 65370936 GGLTR3C1 590 + 65370358 65370936 0 2 76,502, 0,76, +,+, 797181 LTR ERVL 1083 chrZ 65371141 65372904 CR1-F2 592 + 65371141 65372904 0 2 540,940, 0,823, +,+, 797182 LINE CR1 1083 chrZ 65390439 65390758 GGERV10_LTR 465 - 65390439 65390758 0 2 145,73, 0,246, -,-, 797192 LTR ERVL 1083 chrZ 65398480 65398781 CR1-D2 439 + 65398480 65398781 0 2 22,274, 0,27, +,+, 797202 LINE CR1 1084 chrZ 65421499 65422051 CR1-Y2_Aves 225 - 65421499 65422051 0 2 336,216, 0,336, -,-, 797216 LINE CR1 1084 chrZ 65441708 65442008 CR1-Y1_Aves 492 - 65441708 65442008 0 2 127,173, 0,127, -,-, 797227 LINE CR1 1085 chrZ 65576796 65577158 CR1-X2 552 - 65576796 65577158 0 2 204,158, 0,204, -,-, 797313 LINE CR1 1085 chrZ 65610551 65611472 CR1-C4 401 + 65610551 65611472 0 3 59,683,19, 0,178,902, +,+,+, 797334 LINE CR1 1086 chrZ 65681246 65681302 (CATATA)n 486 + 65681246 65681302 0 2 11,13, 0,43, +,+, 797378 Simple_repeat Simple_repeat 1086 chrZ 65723333 65723500 CR1-X2 576 + 65723333 65723500 0 2 68,99, 0,68, +,+, 797405 LINE CR1 1086 chrZ 65784085 65784692 CR1-Y3 607 - 65784085 65784692 0 2 527,68, 0,539, -,-, 797445 LINE CR1 1087 chrZ 65892247 65895529 CR1-F2 346 - 65892247 65895529 0 2 2593,273, 0,3009, -,-, 797489 LINE CR1 1087 chrZ 65902893 65904657 CR1-F2 516 + 65902893 65904657 0 2 667,838, 0,926, +,+, 797492 LINE CR1 1087 chrZ 65913748 65915713 CR1-D2 477 + 65913748 65915713 0 2 860,433, 0,1532, +,+, 797503 LINE CR1 1087 chrZ 65920912 65921011 G-rich 564 + 65920912 65921011 0 2 40,34, 0,65, +,+, 797511 Low_complexity Low_complexity 1088 chrZ 66018719 66019427 CR1-X2 592 + 66018719 66019427 0 3 275,131,48, 0,275,660, +,+,+, 797552 LINE CR1 1088 chrZ 66025533 66027184 CR1-Y2_Aves 179 - 66025533 66027184 0 2 842,161, 0,1490, -,-, 797559 LINE CR1 1089 chrZ 66093657 66095372 CR1-Y2_Aves 342 + 66093657 66095372 0 2 172,859, 0,856, +,+, 797601 LINE CR1 1089 chrZ 66146685 66147893 CR1-H 472 + 66146685 66147893 0 2 208,114, 0,1094, +,+, 797639 LINE CR1 1089 chrZ 66165217 66165604 CR1-F2 611 - 66165217 66165604 0 2 309,78, 0,309, -,-, 797649 LINE CR1 1090 chrZ 66216051 66216368 CR1-D2 625 + 66216051 66216368 0 2 124,186, 0,131, +,+, 797682 LINE CR1 1090 chrZ 66239116 66241500 CR1-H2 364 - 66239116 66241500 0 2 13,238, 0,2146, -,-, 797695 LINE CR1 1090 chrZ 66316986 66318509 CR1-Y3 630 + 66316986 66318509 0 2 530,993, 0,530, +,+, 797748 LINE CR1 1091 chrZ 66341003 66341277 Char12Mar1_GG 658 - 66341003 66341277 0 2 121,153, 0,121, -,-, 797762 DNA hAT-Charlie 1091 chrZ 66415610 66415922 CR1-X1 495 - 66415610 66415922 0 2 96,159, 0,153, -,-, 797809 LINE CR1 1091 chrZ 66424191 66429684 CR1-C4 554 + 66424191 66429684 0 2 228,130, 0,5363, +,+, 797814 LINE CR1 1092 chrZ 66472643 66474549 CR1-C4 453 + 66472643 66474549 0 3 602,78,741, 0,602,1165, +,+,+, 797839 LINE CR1 1092 chrZ 66478600 66480137 CR1-X2 299 + 66478600 66480137 0 3 411,117,895, 0,514,642, +,+,+, 797843 LINE CR1 1092 chrZ 66489826 66491823 CR1-Y2_Aves 67 - 66489826 66491823 0 2 174,295, 0,1702, -,-, 797856 LINE CR1 1092 chrZ 66512028 66512415 CR1-Y2_Aves 358 - 66512028 66512415 0 2 176,160, 0,227, -,-, 797876 LINE CR1 1093 chrZ 66594961 66596273 CR1-X1 493 - 66594961 66596273 0 2 150,842, 0,470, -,-, 797908 LINE CR1 1093 chrZ 66700704 66701723 CR1-F2 553 - 66700704 66701723 0 2 182,832, 0,187, -,-, 797965 LINE CR1 1094 chrZ 66771019 66775938 CR1-C3 477 + 66771019 66775938 0 2 998,152, 0,4767, +,+, 798003 LINE CR1 1094 chrZ 66789639 66791875 CR1-H2 701 - 66789639 66791875 0 2 934,763, 0,1473, -,-, 798018 LINE CR1 1094 chrZ 66792873 66795280 CR1-Y 747 - 66792873 66795280 0 2 1315,315, 0,2092, -,-, 798020 LINE CR1 1095 chrZ 66925292 66929747 CR1-B 610 + 66925292 66929747 0 2 149,4306, 0,149, +,+, 798106 LINE CR1 1095 chrZ 66962010 66962367 GGLTR5B 603 - 66962010 66962367 0 3 87,114,123, 0,120,234, -,-,-, 798123 LTR ERVL 1096 chrZ 67001237 67001493 CR1-Y1_Aves 494 - 67001237 67001493 0 2 130,97, 0,159, -,-, 798148 LINE CR1 1096 chrZ 67006368 67007035 CR1-D2 532 - 67006368 67007035 0 2 226,441, 0,226, -,-, 798154 LINE CR1 1096 chrZ 67073188 67074433 GGERV20_I-int 645 + 67073188 67074433 0 4 86,181,705,52, 0,306,487,1193, +,+,+,+, 798188 LTR ERVL 1096 chrZ 67092465 67093308 CR1-Y2 330 + 67092465 67093308 0 2 406,437, 0,406, +,+, 798206 LINE CR1 1097 chrZ 67113665 67114318 CR1-D2 535 + 67113665 67114318 0 2 74,565, 0,88, +,+, 798210 LINE CR1 1097 chrZ 67120156 67120542 GGLTR8B 305 - 67120156 67120542 0 2 206,148, 0,238, -,-, 798214 LTR ERVL 1097 chrZ 67135072 67137489 Char12Mar1_GG 619 - 67135072 67137489 0 3 173,272,103, 0,319,2314, -,-,-, 798225 DNA hAT-Charlie 1097 chrZ 67135662 67137362 CR1-Y3 544 - 67135662 67137362 0 2 251,1449, 0,251, -,-, 798228 LINE CR1 1097 chrZ 67147176 67148102 CR1-Y2_Aves 349 - 67147176 67148102 0 4 496,234,20,101, 0,549,783,825, -,-,-,-, 798233 LINE CR1 1097 chrZ 67149995 67150289 UCON2 137 - 67149995 67150289 0 2 168,125, 0,169, -,-, 798235 DNA? DNA? 1097 chrZ 67183165 67185220 CR1-H 819 - 67183165 67185220 0 2 265,175, 0,1880, -,-, 798263 LINE CR1 1097 chrZ 67186433 67187975 CR1-H2 267 - 67186433 67187975 0 3 12,343,283, 0,535,1259, -,-,-, 798266 LINE CR1 1097 chrZ 67187082 67187673 CR1-H 326 - 67187082 67187673 0 2 234,345, 0,246, -,-, 798269 LINE CR1 1097 chrZ 67201613 67201839 GGLTR8B 436 - 67201613 67201839 0 2 54,130, 0,96, -,-, 798291 LTR ERVL 1097 chrZ 67208795 67210590 GGERVL-C-int 658 - 67208795 67210590 0 3 281,177,1335, 0,283,460, -,-,-, 798298 LTR ERVL 1097 chrZ 67221195 67224041 GGERVL-A-int 604 - 67221195 67224041 0 3 72,822,301, 0,84,2545, -,-,-, 798304 LTR ERVL 1098 chrZ 67247855 67250701 GGERVL-A-int 604 + 67247855 67250701 0 3 301,822,72, 0,1940,2774, +,+,+, 798331 LTR ERVL 1098 chrZ 67248983 67249800 CR1-Y2 492 + 67248983 67249800 0 2 746,71, 0,746, +,+, 798332 LINE CR1 1098 chrZ 67260233 67262302 GGERVL-A-int 613 + 67260233 67262302 0 2 1985,72, 0,1997, +,+, 798334 LTR ERVL 1098 chrZ 67302154 67303108 CR1-Y4 575 - 67302154 67303108 0 2 372,582, 0,372, -,-, 798360 LINE CR1 1098 chrZ 67328091 67328619 TguLTR5e 311 - 67328091 67328619 0 2 221,202, 0,326, -,-, 798377 LTR ERVL 1099 chrZ 67378510 67379173 CR1-Y4 430 + 67378510 67379173 0 2 330,138, 0,525, +,+, 798416 LINE CR1 1099 chrZ 67409482 67410985 CR1-Y2 318 - 67409482 67410985 0 3 339,770,384, 0,341,1119, -,-,-, 798432 LINE CR1 1099 chrZ 67474355 67476157 CR1-H 804 - 67474355 67476157 0 2 1075,723, 0,1079, -,-, 798451 LINE CR1 1099 chrZ 67478335 67478708 CR1-C2 788 - 67478335 67478708 0 2 239,134, 0,239, -,-, 798452 LINE CR1 1099 chrZ 67487072 67487445 CR1-Y2_Aves 204 + 67487072 67487445 0 2 121,252, 0,121, +,+, 798455 LINE CR1 1099 chrZ 67490679 67491490 CR1-D2 509 + 67490679 67491490 0 2 146,665, 0,146, +,+, 798457 LINE CR1 1100 chrZ 67539234 67539932 CR1-E 720 + 67539234 67539932 0 2 123,571, 0,127, +,+, 798484 LINE CR1 1100 chrZ 67582638 67584896 GGLTR5B 672 + 67582638 67584896 0 2 291,269, 0,1989, +,+, 798525 LTR ERVL 1100 chrZ 67582924 67584625 CR1-H 805 + 67582924 67584625 0 3 565,832,304, 0,565,1397, +,+,+, 798526 LINE CR1 1100 chrZ 67609302 67610250 CR1-X 498 - 67609302 67610250 0 3 87,281,206, 0,87,742, -,-,-, 798552 LINE CR1 1100 chrZ 67609670 67610044 GGLTR3G1 600 - 67609670 67610044 0 2 163,211, 0,163, -,-, 798553 LTR ERVL 1101 chrZ 67664379 67670676 CR1-H2 138 + 67664379 67670676 0 2 179,515, 0,5782, +,+, 798605 LINE CR1 1101 chrZ 67677431 67677761 GGLTR5B 476 + 67677431 67677761 0 2 100,227, 0,103, +,+, 798624 LTR ERVL 1101 chrZ 67681171 67681885 CR1-Y4 541 - 67681171 67681885 0 2 474,240, 0,474, -,-, 798626 LINE CR1 1101 chrZ 67683049 67683520 GGLTR5A 274 + 67683049 67683520 0 2 261,151, 0,320, +,+, 798627 LTR ERVL 1101 chrZ 67726392 67727935 CR1-D 685 - 67726392 67727935 0 2 535,1008, 0,535, -,-, 798669 LINE CR1 1101 chrZ 67750388 67751678 Char12Mar1_GG 601 - 67750388 67751678 0 2 133,338, 0,952, -,-, 798690 DNA hAT-Charlie 1101 chrZ 67762202 67762781 CR1-C2 758 - 67762202 67762781 0 2 478,101, 0,478, -,-, 798707 LINE CR1 1102 chrZ 67775812 67775892 CR1-C2 871 - 67775812 67775892 0 2 32,48, 0,32, -,-, 798723 LINE CR1 1102 chrZ 67792349 67793153 CR1-B 488 + 67792349 67793153 0 2 179,587, 0,217, +,+, 798737 LINE CR1 1102 chrZ 67793151 67793663 CR1-H2 793 + 67793151 67793663 0 2 193,319, 0,193, +,+, 798738 LINE CR1 1102 chrZ 67802927 67806536 CR1-F 852 + 67802927 67806536 0 2 119,3388, 0,221, +,+, 798745 LINE CR1 1102 chrZ 67812744 67813841 CR1-H2 718 + 67812744 67813841 0 3 251,193,319, 0,585,778, +,+,+, 798753 LINE CR1 1102 chrZ 67823104 67826713 CR1-F 852 + 67823104 67826713 0 2 119,3388, 0,221, +,+, 798761 LINE CR1 1102 chrZ 67832921 67834018 CR1-H2 718 + 67832921 67834018 0 3 251,193,319, 0,585,778, +,+,+, 798769 LINE CR1 1102 chrZ 67843281 67846880 CR1-F 852 + 67843281 67846880 0 2 119,3378, 0,221, +,+, 798777 LINE CR1 1102 chrZ 67853117 67854214 CR1-H2 718 + 67853117 67854214 0 3 251,193,319, 0,585,778, +,+,+, 798785 LINE CR1 1102 chrZ 67863477 67867060 CR1-F 856 + 67863477 67867060 0 2 119,3362, 0,221, +,+, 798793 LINE CR1 1102 chrZ 67873297 67874394 CR1-H2 718 + 67873297 67874394 0 3 251,193,319, 0,585,778, +,+,+, 798801 LINE CR1 1102 chrZ 67883657 67885637 CR1-F 829 + 67883657 67885637 0 3 119,1706,53, 0,221,1927, +,+,+, 798809 LINE CR1 1102 chrZ 67888961 67890316 GGLTR7-int 402 + 67888961 67890316 0 4 792,81,203,175, 0,822,930,1180, +,+,+,+, 798815 LTR ERV1 1103 chrZ 67901944 67903438 CR1-C3 679 - 67901944 67903438 0 2 577,630, 0,864, -,-, 798830 LINE CR1 1103 chrZ 67932292 67932696 GGLTR6 581 + 67932292 67932696 0 2 136,131, 0,273, +,+, 798855 LTR ERVL 1103 chrZ 67948427 67951009 CR1-Y3 485 + 67948427 67951009 0 3 224,732,542, 0,699,2040, +,+,+, 798873 LINE CR1 1103 chrZ 67968407 67970989 CR1-Y3 484 + 67968407 67970989 0 3 224,732,542, 0,699,2040, +,+,+, 798900 LINE CR1 1103 chrZ 67988579 67991161 CR1-Y3 484 + 67988579 67991161 0 3 224,732,542, 0,699,2040, +,+,+, 798928 LINE CR1 1103 chrZ 68008747 68010705 CR1-Y 436 + 68008747 68010705 0 2 224,1260, 0,698, +,+, 798954 LINE CR1 1104 chrZ 68027420 68029378 CR1-Y 436 + 68027420 68029378 0 2 224,1260, 0,698, +,+, 798979 LINE CR1 1104 chrZ 68046106 68048071 CR1-Y 432 + 68046106 68048071 0 2 224,1266, 0,699, +,+, 799003 LINE CR1 1104 chrZ 68064999 68066964 CR1-Y 431 + 68064999 68066964 0 2 224,1266, 0,699, +,+, 799028 LINE CR1 1104 chrZ 68084369 68086327 CR1-Y 436 + 68084369 68086327 0 2 224,1260, 0,698, +,+, 799053 LINE CR1 1104 chrZ 68103431 68105389 CR1-Y 436 + 68103431 68105389 0 2 224,1260, 0,698, +,+, 799074 LINE CR1 1104 chrZ 68135131 68137681 CR1-F 818 + 68135131 68137681 0 2 600,1497, 0,1053, +,+, 799107 LINE CR1 1104 chrZ 68147243 68147674 CR1-C 851 - 68147243 68147674 0 2 401,30, 0,401, -,-, 799113 LINE CR1 1104 chrZ 68151174 68151476 CR1-X2 583 - 68151174 68151476 0 2 238,60, 0,242, -,-, 799116 LINE CR1 1105 chrZ 68167610 68168319 CR1-Y2 177 + 68167610 68168319 0 2 203,378, 0,331, +,+, 799129 LINE CR1 1105 chrZ 68210530 68210828 GGLTR8A 342 + 68210530 68210828 0 2 24,228, 0,70, +,+, 799166 LTR ERVL 1105 chrZ 68212698 68213470 CR1-C4 476 - 68212698 68213470 0 3 63,66,622, 0,72,150, -,-,-, 799169 LINE CR1 1105 chrZ 68251927 68252582 GGLTR5A 328 + 68251927 68252582 0 2 361,172, 0,483, +,+, 799203 LTR ERVL 1105 chrZ 68253786 68256149 CR1-C4 501 + 68253786 68256149 0 3 1373,551,422, 0,1390,1941, +,+,+, 799204 LINE CR1 1105 chrZ 68264847 68265259 CR1-C4 551 - 68264847 68265259 0 2 137,265, 0,147, -,-, 799211 LINE CR1 1106 chrZ 68362384 68362574 CR1-E 640 + 68362384 68362574 0 2 132,58, 0,132, +,+, 799282 LINE CR1 1106 chrZ 68415230 68415865 GGLTR3G1 764 - 68415230 68415865 0 2 55,480, 0,155, -,-, 799323 LTR ERVL 1107 chrZ 68437988 68438883 CR1-Y3 756 - 68437988 68438883 0 2 70,45, 0,850, -,-, 799344 LINE CR1 1107 chrZ 68456781 68461588 CR1-C3 586 - 68456781 68461588 0 2 967,1015, 0,3792, -,-, 799363 LINE CR1 1107 chrZ 68461588 68462008 GGLTR3C2 590 - 68461588 68462008 0 2 209,208, 0,212, -,-, 799370 LTR ERVL 1107 chrZ 68463467 68463961 GGLTR3F1 762 - 68463467 68463961 0 2 231,231, 0,263, -,-, 799374 LTR ERVL 1107 chrZ 68471632 68471859 GGLTR8B 451 + 68471632 68471859 0 2 131,96, 0,131, +,+, 799378 LTR ERVL 1107 chrZ 68483509 68485942 CR1-Y 424 + 68483509 68485942 0 2 534,1540, 0,893, +,+, 799387 LINE CR1 1107 chrZ 68511689 68512576 CR1-Y1_Aves 315 + 68511689 68512576 0 2 616,271, 0,616, +,+, 799409 LINE CR1 1108 chrZ 68555776 68556362 CR1-Y2_Aves 349 - 68555776 68556362 0 2 456,107, 0,479, -,-, 799437 LINE CR1 1108 chrZ 68584833 68585665 CR1-Y1_Aves 484 + 68584833 68585665 0 2 277,246, 0,586, +,+, 799451 LINE CR1 1108 chrZ 68609309 68609541 CR1-C 790 - 68609309 68609541 0 2 74,158, 0,74, -,-, 799469 LINE CR1 1108 chrZ 68648462 68650389 CR1-Y2_Aves 418 + 68648462 68650389 0 2 160,1767, 0,160, +,+, 799486 LINE CR1 1109 chrZ 68714027 68714374 Char12Mar1_GG 506 - 68714027 68714374 0 2 182,163, 0,184, -,-, 799512 DNA hAT-Charlie 1109 chrZ 68799722 68800930 CR1-Y4 472 + 68799722 68800930 0 3 411,105,692, 0,411,516, +,+,+, 799564 LINE CR1 1110 chrZ 68820241 68821588 GGLTR3B1 669 - 68820241 68821588 0 2 959,387, 0,960, -,-, 799580 LTR ERVL 1110 chrZ 68827952 68829061 CR1-C4 364 + 68827952 68829061 0 2 101,80, 0,1029, +,+, 799585 LINE CR1 1110 chrZ 68847436 68847503 (ATGTGT)n 232 + 68847436 68847503 0 2 33,6, 0,61, +,+, 799599 Simple_repeat Simple_repeat 1110 chrZ 68852332 68855445 CR1-F 534 + 68852332 68855445 0 3 408,1257,1441, 0,408,1672, +,+,+, 799604 LINE CR1 1110 chrZ 68882088 68882337 GGLTR5B 505 + 68882088 68882337 0 2 211,37, 0,212, +,+, 799620 LTR ERVL 1110 chrZ 68939363 68940675 CR1-Y3 647 + 68939363 68940675 0 2 900,412, 0,900, +,+, 799659 LINE CR1 1111 chrZ 68959308 68959403 CR1-D2 567 + 68959308 68959403 0 2 58,37, 0,58, +,+, 799665 LINE CR1 1111 chrZ 68978791 68979810 CR1-Y2 425 + 68978791 68979810 0 2 82,937, 0,82, +,+, 799677 LINE CR1 1111 chrZ 68981372 68981953 GGLTR8B 272 + 68981372 68981953 0 2 311,238, 0,343, +,+, 799678 LTR ERVL 1111 chrZ 68992122 68993504 CR1-Y2_Aves 290 + 68992122 68993504 0 2 146,1118, 0,264, +,+, 799683 LINE CR1 1111 chrZ 69027869 69028548 CR1-Y2_Aves 405 + 69027869 69028548 0 3 40,271,206, 0,175,473, +,+,+, 799712 LINE CR1 1112 chrZ 69139788 69140317 GGLTR8A 270 + 69139788 69140317 0 2 218,311, 0,218, +,+, 799792 LTR ERVL 1112 chrZ 69174887 69175097 GGLTR5B 424 + 69174887 69175097 0 2 81,90, 0,120, +,+, 799822 LTR ERVL 1113 chrZ 69260277 69260815 CR1-C4 549 + 69260277 69260815 0 2 374,164, 0,374, +,+, 799879 LINE CR1 1113 chrZ 69282571 69283646 CR1-X2 435 - 69282571 69283646 0 2 586,489, 0,586, -,-, 799900 LINE CR1 1114 chrZ 69348388 69351834 CR1-C4 485 + 69348388 69351834 0 2 537,590, 0,2856, +,+, 799941 LINE CR1 1114 chrZ 69373186 69374111 CR1-C4 425 + 69373186 69374111 0 2 430,495, 0,430, +,+, 799958 LINE CR1 1114 chrZ 69403658 69404497 Charlie12_GG 522 - 69403658 69404497 0 2 458,331, 0,508, -,-, 799975 DNA hAT-Charlie 1114 chrZ 69420450 69421988 CR1-Y2 723 + 69420450 69421988 0 2 114,799, 0,739, +,+, 799985 LINE CR1 1114 chrZ 69455217 69455525 CR1-C2 700 - 69455217 69455525 0 2 95,213, 0,95, -,-, 800012 LINE CR1 1115 chrZ 69476911 69479613 CR1-F2 545 - 69476911 69479613 0 2 503,1027, 0,1675, -,-, 800034 LINE CR1 1115 chrZ 69482814 69483063 CR1-F2 381 + 69482814 69483063 0 2 96,153, 0,96, +,+, 800042 LINE CR1 1115 chrZ 69483528 69486404 CR1-C 597 + 69483528 69486404 0 2 404,2405, 0,471, +,+, 800044 LINE CR1 1115 chrZ 69487293 69488672 CR1-C3 641 + 69487293 69488672 0 2 267,1112, 0,267, +,+, 800047 LINE CR1 1115 chrZ 69500818 69501919 CR1-Y2_Aves 233 - 69500818 69501919 0 2 583,456, 0,645, -,-, 800061 LINE CR1 1115 chrZ 69504735 69504836 (TGTGTA)n 202 + 69504735 69504836 0 2 22,30, 0,71, +,+, 800066 Simple_repeat Simple_repeat 1115 chrZ 69510545 69510615 (T)n 952 + 69510545 69510615 0 2 17,22, 0,48, +,+, 800072 Simple_repeat Simple_repeat 1115 chrZ 69526047 69527452 CR1-Y4 484 + 69526047 69527452 0 2 321,181, 0,1224, +,+, 800093 LINE CR1 1115 chrZ 69546072 69546570 CR1-Y1_Aves 390 - 69546072 69546570 0 2 108,390, 0,108, -,-, 800106 LINE CR1 1115 chrZ 69549544 69549875 CR1-E 443 - 69549544 69549875 0 2 241,82, 0,249, -,-, 800111 LINE CR1 1116 chrZ 69617214 69619269 CR1-Y2_Aves 273 - 69617214 69619269 0 2 256,1149, 0,906, -,-, 800171 LINE CR1 1116 chrZ 69627907 69628729 CR1-Y1_Aves 350 - 69627907 69628729 0 2 478,306, 0,516, -,-, 800186 LINE CR1 1116 chrZ 69636673 69637615 CR1-Y3 671 + 69636673 69637615 0 2 706,234, 0,708, +,+, 800200 LINE CR1 1116 chrZ 69676716 69680827 CR1-Y2_Aves 65 - 69676716 69680827 0 2 1393,413, 0,3698, -,-, 800253 LINE CR1 1116 chrZ 69690736 69692014 CR1-C4 553 - 69690736 69692014 0 3 136,614,165, 0,490,1113, -,-,-, 800264 LINE CR1 1117 chrZ 69732143 69732410 CR1-H 656 - 69732143 69732410 0 2 189,64, 0,203, -,-, 800311 LINE CR1 1117 chrZ 69745286 69745845 CR1-Y1_Aves 393 + 69745286 69745845 0 2 343,205, 0,354, +,+, 800322 LINE CR1 1117 chrZ 69770613 69772681 CR1-C4 508 - 69770613 69772681 0 2 562,715, 0,1353, -,-, 800354 LINE CR1 1117 chrZ 69806462 69807878 CR1-C 803 + 69806462 69807878 0 2 71,861, 0,555, +,+, 800391 LINE CR1 1118 chrZ 69886199 69887704 CR1-F2 553 - 69886199 69887704 0 2 48,615, 0,890, -,-, 800486 LINE CR1 1118 chrZ 69901370 69902006 CR1-C4 392 + 69901370 69902006 0 2 549,87, 0,549, +,+, 800509 LINE CR1 1118 chrZ 69911569 69912430 CR1-E 711 - 69911569 69912430 0 2 557,64, 0,797, -,-, 800519 LINE CR1 1118 chrZ 69923327 69923650 CR1-C2 770 - 69923327 69923650 0 2 246,77, 0,246, -,-, 800527 LINE CR1 1118 chrZ 69926509 69926561 (TTGT)n 436 + 69926509 69926561 0 2 20,10, 0,42, +,+, 800532 Simple_repeat Simple_repeat 1118 chrZ 69930486 69930835 GGLTR5A 448 - 69930486 69930835 0 2 60,289, 0,60, -,-, 800540 LTR ERVL 1118 chrZ 69931081 69931917 CR1-C4 316 + 69931081 69931917 0 2 133,365, 0,471, +,+, 800541 LINE CR1 1118 chrZ 69980024 69980508 Char12Mar1_GG 484 - 69980024 69980508 0 2 176,251, 0,233, -,-, 800594 DNA hAT-Charlie 1119 chrZ 70000633 70003928 CR1-C4 380 - 70000633 70003928 0 2 424,483, 0,2812, -,-, 800613 LINE CR1 1119 chrZ 70005671 70006202 CR1-C4 471 - 70005671 70006202 0 2 298,233, 0,298, -,-, 800616 LINE CR1 1119 chrZ 70011324 70018405 GGLTR5A 327 + 70011324 70018405 0 2 137,153, 0,6928, +,+, 800621 LTR ERVL 1119 chrZ 70020274 70021823 GGERVL-A-int 224 - 70020274 70021823 0 3 236,179,238, 0,427,1311, -,-,-, 800632 LTR ERVL 1119 chrZ 70024431 70025864 Char12Mar1_GG 543 - 70024431 70025864 0 3 118,26,1238, 0,144,195, -,-,-, 800638 DNA hAT-Charlie 1119 chrZ 70042921 70044786 GGERVL-B-int 755 - 70042921 70044786 0 2 1423,440, 0,1425, -,-, 800664 LTR ERVL 1119 chrZ 70050797 70051317 CR1-E 249 + 70050797 70051317 0 2 254,70, 0,450, +,+, 800670 LINE CR1 1119 chrZ 70098443 70098532 (ACA)n 260 + 70098443 70098532 0 2 43,19, 0,70, +,+, 800697 Simple_repeat Simple_repeat 1119 chrZ 70114796 70116831 GGLTR8A 483 - 70114796 70116831 0 2 184,128, 0,1907, -,-, 800716 LTR ERVL 1120 chrZ 70183440 70185424 CR1-Y2_Aves 227 + 70183440 70185424 0 3 911,826,158, 0,914,1826, +,+,+, 800778 LINE CR1 1120 chrZ 70197905 70198552 GGLTR5B 397 + 70197905 70198552 0 2 416,203, 0,444, +,+, 800793 LTR ERVL 1120 chrZ 70205388 70211571 GGERVK1-int 989 - 70205388 70211571 0 4 241,447,5254,241, 0,241,688,5942, -,-,-,-, 800802 LTR ERVK 1120 chrZ 70218624 70219516 CR1-D2 571 + 70218624 70219516 0 2 70,806, 0,86, +,+, 800810 LINE CR1 1120 chrZ 70220448 70222069 CR1-F2 535 - 70220448 70222069 0 2 1197,184, 0,1437, -,-, 800811 LINE CR1 1120 chrZ 70236981 70237407 CR1-D2 542 + 70236981 70237407 0 2 161,265, 0,161, +,+, 800824 LINE CR1 1120 chrZ 70249228 70249545 GGLTR11-int 516 + 70249228 70249545 0 2 122,133, 0,184, +,+, 800831 LTR ERV1 1121 chrZ 70305757 70306372 CR1-X2 472 + 70305757 70306372 0 2 412,203, 0,412, +,+, 800869 LINE CR1 1121 chrZ 70365198 70366713 CR1-G 581 + 70365198 70366713 0 2 616,355, 0,1160, +,+, 800921 LINE CR1 1122 chrZ 70465465 70465920 CR1-F2 637 + 70465465 70465920 0 2 373,82, 0,373, +,+, 800993 LINE CR1 1122 chrZ 70470702 70476922 GGERVL-C-int 748 - 70470702 70476922 0 3 1193,91,412, 0,1193,5808, -,-,-, 801001 LTR ERVL 1122 chrZ 70472230 70476476 CR1-C 826 + 70472230 70476476 0 2 371,3268, 0,978, +,+, 801003 LINE CR1 1122 chrZ 70501732 70502028 CR1-Y1_Aves 527 + 70501732 70502028 0 2 227,61, 0,235, +,+, 801016 LINE CR1 1123 chrZ 70534232 70535030 CR1-C2 898 + 70534232 70535030 0 2 35,761, 0,37, +,+, 801029 LINE CR1 1123 chrZ 70555931 70556210 CR1-Y2_Aves 324 - 70555931 70556210 0 2 56,180, 0,99, -,-, 801041 LINE CR1 1123 chrZ 70563638 70564677 CR1-C4 538 + 70563638 70564677 0 3 348,317,374, 0,348,665, +,+,+, 801046 LINE CR1 1123 chrZ 70620849 70624975 CR1-Y2_Aves 380 + 70620849 70624975 0 2 92,101, 0,4025, +,+, 801073 LINE CR1 1123 chrZ 70622095 70622560 CR1-Y2_Aves 176 - 70622095 70622560 0 2 245,136, 0,329, -,-, 801074 LINE CR1 1124 chrZ 70703142 70703925 CR1-Y2_Aves 125 - 70703142 70703925 0 2 150,314, 0,469, -,-, 801118 LINE CR1 1124 chrZ 70705238 70707202 CR1-Y1_Aves 420 + 70705238 70707202 0 4 132,70,594,265, 0,529,746,1699, +,+,+,+, 801122 LINE CR1 1124 chrZ 70705348 70705755 CR1-X2 413 + 70705348 70705755 0 2 95,312, 0,95, +,+, 801123 LINE CR1 1124 chrZ 70709290 70710311 CR1-C4 494 - 70709290 70710311 0 2 365,524, 0,497, -,-, 801129 LINE CR1 1124 chrZ 70756872 70760900 CR1-C4 515 + 70756872 70760900 0 4 1923,310,551,424, 0,2512,3051,3604, +,+,+,+, 801163 LINE CR1 1124 chrZ 70758793 70759376 CR1-H 794 - 70758793 70759376 0 2 499,84, 0,499, -,-, 801164 LINE CR1 1125 chrZ 70814724 70815286 ENS1-LTR 825 + 70814724 70815286 0 2 445,117, 0,445, +,+, 801197 LTR ERVL 1125 chrZ 70833096 70833497 GGLTR8A 493 - 70833096 70833497 0 3 167,139,93, 0,167,308, -,-,-, 801207 LTR ERVL 1125 chrZ 70844722 70849130 CR1-Y1_Aves 153 - 70844722 70849130 0 2 888,1160, 0,3248, -,-, 801212 LINE CR1 1125 chrZ 70873354 70873998 CR1-C3 631 - 70873354 70873998 0 2 352,292, 0,352, -,-, 801225 LINE CR1 1125 chrZ 70902785 70903329 GGERVL-C-int 810 - 70902785 70903329 0 2 508,36, 0,508, -,-, 801244 LTR ERVL 1125 chrZ 70903329 70909086 GGERVL-B-int 800 - 70903329 70909086 0 2 5254,501, 0,5256, -,-, 801245 LTR ERVL 1126 chrZ 70948449 70952569 CR1-D2 452 + 70948449 70952569 0 2 90,340, 0,3780, +,+, 801266 LINE CR1 1126 chrZ 70968514 70969501 CR1-C4 546 - 70968514 70969501 0 2 496,491, 0,496, -,-, 801281 LINE CR1 1126 chrZ 71015781 71016992 CR1-Y3 574 - 71015781 71016992 0 2 282,339, 0,872, -,-, 801304 LINE CR1 1126 chrZ 71016058 71016653 GGLTR3F2 919 + 71016058 71016653 0 3 109,233,202, 0,109,393, +,+,+, 801305 LTR ERVL 1126 chrZ 71026530 71026965 CR1-F2 783 - 71026530 71026965 0 2 297,138, 0,297, -,-, 801316 LINE CR1 1126 chrZ 71036359 71036649 CR1-H 688 + 71036359 71036649 0 2 39,251, 0,39, +,+, 801326 LINE CR1 1127 chrZ 71047305 71049839 CR1-F 808 - 71047305 71049839 0 2 1342,1192, 0,1342, -,-, 801332 LINE CR1 1127 chrZ 71052011 71052304 CR1-H 686 + 71052011 71052304 0 2 39,254, 0,39, +,+, 801336 LINE CR1 1127 chrZ 71100012 71100376 CR1-F0 646 - 71100012 71100376 0 2 44,320, 0,44, -,-, 801363 LINE CR1 1127 chrZ 71113961 71114749 CR1-C 901 - 71113961 71114749 0 2 102,92, 0,696, -,-, 801383 LINE CR1 1127 chrZ 71125184 71126049 GGLTR8B 108 - 71125184 71126049 0 2 124,604, 0,261, -,-, 801395 LTR ERVL 1127 chrZ 71161585 71165656 CR1-H 812 - 71161585 71165656 0 2 312,1188, 0,2883, -,-, 801424 LINE CR1 1128 chrZ 71186468 71186914 Mariner1b_GG 668 - 71186468 71186914 0 2 337,109, 0,337, -,-, 801443 DNA TcMar-Mariner 1128 chrZ 71234679 71235126 CR1-C4 393 - 71234679 71235126 0 2 253,136, 0,311, -,-, 801478 LINE CR1 1128 chrZ 71253968 71254696 Mariner1_GG 688 - 71253968 71254696 0 2 502,50, 0,678, -,-, 801494 DNA TcMar-Mariner 1128 chrZ 71276722 71278627 CR1-Y 397 - 71276722 71278627 0 2 303,1254, 0,651, -,-, 801523 LINE CR1 1128 chrZ 71290557 71291538 CR1-F2 431 - 71290557 71291538 0 2 569,412, 0,569, -,-, 801535 LINE CR1 1129 chrZ 71304108 71307082 GGLTR5B 630 + 71304108 71307082 0 2 217,166, 0,2808, +,+, 801549 LTR ERVL 1129 chrZ 71324884 71326537 CR1-D2 597 - 71324884 71326537 0 2 130,478, 0,1175, -,-, 801568 LINE CR1 1129 chrZ 71326509 71331757 CR1-D2 624 + 71326509 71331757 0 3 89,260,141, 0,4228,5107, +,+,+, 801571 LINE CR1 1129 chrZ 71329241 71329723 GGLTR5A 409 - 71329241 71329723 0 2 132,279, 0,203, -,-, 801575 LTR ERVL 1129 chrZ 71337949 71339575 CR1-C4 536 - 71337949 71339575 0 3 403,565,634, 0,413,992, -,-,-, 801588 LINE CR1 1129 chrZ 71341525 71342242 CR1-Y2_Aves 319 + 71341525 71342242 0 2 234,458, 0,259, +,+, 801592 LINE CR1 1129 chrZ 71350690 71353107 CR1-D 624 + 71350690 71353107 0 3 848,398,1171, 0,848,1246, +,+,+, 801600 LINE CR1 1129 chrZ 71360911 71363815 CR1-C4 537 + 71360911 71363815 0 3 243,1091,1035, 0,773,1869, +,+,+, 801608 LINE CR1 1129 chrZ 71370235 71372266 CR1-C4 474 - 71370235 71372266 0 3 108,518,94, 0,1419,1937, -,-,-, 801614 LINE CR1 1129 chrZ 71370339 71371632 CR1-Y4 544 + 71370339 71371632 0 2 599,654, 0,639, +,+, 801615 LINE CR1 1129 chrZ 71420168 71421301 Mariner1_GG 596 - 71420168 71421301 0 2 1021,101, 0,1032, -,-, 801650 DNA TcMar-Mariner 1129 chrZ 71429239 71429918 GGLTR5A 190 + 71429239 71429918 0 2 319,127, 0,552, +,+, 801656 LTR ERVL 1129 chrZ 71433132 71433994 Char12Mar1_GG 676 - 71433132 71433994 0 2 163,204, 0,658, -,-, 801660 DNA hAT-Charlie 1130 chrZ 71437427 71438004 CR1-C4 412 + 71437427 71438004 0 2 110,458, 0,119, +,+, 801662 LINE CR1 1130 chrZ 71452624 71453266 CR1-E 663 - 71452624 71453266 0 2 64,578, 0,64, -,-, 801684 LINE CR1 1130 chrZ 71456413 71456469 (ATTTAT)n 502 + 71456413 71456469 0 2 7,6, 0,50, +,+, 801688 Simple_repeat Simple_repeat 1130 chrZ 71457683 71458094 CR1-X1 591 - 71457683 71458094 0 2 53,221, 0,190, -,-, 801692 LINE CR1 1131 chrZ 71600232 71603110 CR1-D2 374 - 71600232 71603110 0 2 150,347, 0,2531, -,-, 801798 LINE CR1 1131 chrZ 71607121 71609196 CR1-C4 607 - 71607121 71609196 0 3 756,396,369, 0,756,1706, -,-,-, 801807 LINE CR1 1131 chrZ 71640924 71641356 CR1-D2 728 + 71640924 71641356 0 2 361,71, 0,361, +,+, 801830 LINE CR1 1131 chrZ 71662890 71664160 CR1-X2 392 + 71662890 71664160 0 4 257,83,777,142, 0,263,351,1128, +,+,+,+, 801849 LINE CR1 1132 chrZ 71699724 71701370 CR1-F2 274 - 71699724 71701370 0 2 366,1276, 0,370, -,-, 801867 LINE CR1 1132 chrZ 71714228 71714790 GGLTR8B 352 + 71714228 71714790 0 2 260,302, 0,260, +,+, 801873 LTR ERVL 1132 chrZ 71772509 71772738 Char12Mar1_GG 669 - 71772509 71772738 0 2 169,60, 0,169, -,-, 801921 DNA hAT-Charlie 1132 chrZ 71775317 71776098 Char12Mar1_GG 603 - 71775317 71776098 0 2 210,330, 0,451, -,-, 801924 DNA hAT-Charlie 1133 chrZ 71842152 71842925 CR1-E 706 - 71842152 71842925 0 2 147,616, 0,157, -,-, 801982 LINE CR1 1133 chrZ 71846265 71846339 (TGTTTT)n 380 + 71846265 71846339 0 2 38,12, 0,62, +,+, 801985 Simple_repeat Simple_repeat 1133 chrZ 71863328 71865276 CR1-C4 543 - 71863328 71865276 0 3 505,968,475, 0,505,1473, -,-,-, 801995 LINE CR1 1133 chrZ 71881947 71883258 GGERVL-A-int 213 + 71881947 71883258 0 2 245,240, 0,1071, +,+, 802013 LTR ERVL 1133 chrZ 71909643 71910543 CR1-E 711 + 71909643 71910543 0 2 149,735, 0,165, +,+, 802031 LINE CR1 1133 chrZ 71919071 71919155 (T)n 824 + 71919071 71919155 0 2 37,24, 0,60, +,+, 802041 Simple_repeat Simple_repeat 1133 chrZ 71922389 71924108 CR1-Y4 479 + 71922389 71924108 0 4 685,429,336,169, 0,785,1214,1550, +,+,+,+, 802043 LINE CR1 1133 chrZ 71938908 71941588 CR1-C4 480 + 71938908 71941588 0 2 152,239, 0,2441, +,+, 802054 LINE CR1 1133 chrZ 71947327 71949607 GGERVL-B-int 210 + 71947327 71949607 0 4 243,276,136,621, 0,826,1350,1659, +,+,+,+, 802066 LTR ERVL 1134 chrZ 71972279 71975010 Mariner1_GG 634 - 71972279 71975010 0 3 757,194,159, 0,2378,2572, -,-,-, 802089 DNA TcMar-Mariner 1134 chrZ 71973077 71974659 CR1-C 769 - 71973077 71974659 0 2 1390,192, 0,1390, -,-, 802091 LINE CR1 1134 chrZ 71979065 71979377 GGLTR11-int 569 + 71979065 71979377 0 2 135,123, 0,189, +,+, 802093 LTR ERV1 1134 chrZ 72015832 72017126 CR1-D2 474 + 72015832 72017126 0 3 394,680,190, 0,394,1104, +,+,+, 802128 LINE CR1 1134 chrZ 72029870 72030789 CR1-X2 188 + 72029870 72030789 0 2 453,454, 0,465, +,+, 802140 LINE CR1 1134 chrZ 72035446 72036426 CR1-Y1_Aves 417 + 72035446 72036426 0 2 799,181, 0,799, +,+, 802148 LINE CR1 1134 chrZ 72036737 72037146 CR1-Y4 383 + 72036737 72037146 0 2 113,296, 0,113, +,+, 802150 LINE CR1 1134 chrZ 72049149 72051377 CR1-C3 505 - 72049149 72051377 0 3 208,312,1708, 0,208,520, -,-,-, 802161 LINE CR1 1134 chrZ 72066323 72067386 CR1-F2 445 + 72066323 72067386 0 2 774,289, 0,774, +,+, 802179 LINE CR1 1134 chrZ 72073910 72074543 CR1-C4 574 + 72073910 72074543 0 2 364,247, 0,386, +,+, 802189 LINE CR1 1135 chrZ 72096131 72096295 A-rich 472 + 72096131 72096295 0 2 58,55, 0,109, +,+, 802211 Low_complexity Low_complexity 1135 chrZ 72102935 72103951 CR1-Y4 515 - 72102935 72103951 0 2 94,619, 0,397, -,-, 802216 LINE CR1 1135 chrZ 72110959 72111112 CR1-D2 519 - 72110959 72111112 0 2 83,70, 0,83, -,-, 802222 LINE CR1 1135 chrZ 72111042 72112420 CR1-C4 304 - 72111042 72112420 0 3 60,281,1026, 0,60,352, -,-,-, 802223 LINE CR1 1135 chrZ 72115005 72115692 CR1-H 336 - 72115005 72115692 0 3 234,252,162, 0,234,525, -,-,-, 802225 LINE CR1 1135 chrZ 72116057 72117568 CR1-H 309 + 72116057 72117568 0 2 200,1277, 0,234, +,+, 802227 LINE CR1 1135 chrZ 72118398 72120055 CR1-C4 500 + 72118398 72120055 0 2 588,796, 0,861, +,+, 802228 LINE CR1 1135 chrZ 72131846 72133778 CR1-E 247 + 72131846 72133778 0 3 597,71,550, 0,626,1382, +,+,+, 802234 LINE CR1 1135 chrZ 72134447 72134956 CR1-L3B_Croc 345 - 72134447 72134956 0 2 241,68, 0,441, -,-, 802239 LINE CR1 1135 chrZ 72158218 72158450 GGLTR12B 246 + 72158218 72158450 0 2 171,32, 0,200, +,+, 802259 LTR ERVL 1135 chrZ 72208950 72209728 CR1-E 648 + 72208950 72209728 0 2 372,406, 0,372, +,+, 802305 LINE CR1 1135 chrZ 72209828 72215328 CR1-F2 266 - 72209828 72215328 0 2 304,1232, 0,4268, -,-, 802306 LINE CR1 1135 chrZ 72210138 72214097 CR1-D 291 + 72210138 72214097 0 2 278,3485, 0,474, +,+, 802307 LINE CR1 1136 chrZ 72226045 72227620 CR1-F2 415 + 72226045 72227620 0 2 507,113, 0,1462, +,+, 802319 LINE CR1 1136 chrZ 72226569 72227508 CR1-E 617 - 72226569 72227508 0 2 410,529, 0,410, -,-, 802320 LINE CR1 1136 chrZ 72229831 72231127 CR1-X2 562 - 72229831 72231127 0 2 699,54, 0,1242, -,-, 802321 LINE CR1 1136 chrZ 72244504 72244856 CR1-D 495 + 72244504 72244856 0 2 112,240, 0,112, +,+, 802336 LINE CR1 1136 chrZ 72252137 72252371 CR1-C3 647 - 72252137 72252371 0 2 165,69, 0,165, -,-, 802344 LINE CR1 1136 chrZ 72252665 72253560 CR1-F0 456 + 72252665 72253560 0 2 408,487, 0,408, +,+, 802345 LINE CR1 1136 chrZ 72265312 72266028 CR1-C3 706 - 72265312 72266028 0 3 244,129,337, 0,244,379, -,-,-, 802359 LINE CR1 1136 chrZ 72269214 72269516 CR1-F0 812 - 72269214 72269516 0 2 215,87, 0,215, -,-, 802362 LINE CR1 1136 chrZ 72271671 72275945 Mariner1_GG 626 - 72271671 72275945 0 4 214,368,669,58, 0,1873,2463,4216, -,-,-,-, 802367 DNA TcMar-Mariner 1136 chrZ 72277142 72279834 CR1-E 356 - 72277142 72279834 0 2 133,765, 0,1927, -,-, 802371 LINE CR1 1136 chrZ 72318819 72319089 GGLTR3C1 568 - 72318819 72319089 0 2 218,52, 0,218, -,-, 802402 LTR ERVL 1136 chrZ 72319935 72321938 Charlie12_GG 309 - 72319935 72321938 0 2 1906,94, 0,1909, -,-, 802405 DNA hAT-Charlie 17 chrZ 72350583 72351821 CR1-Y4 464 - 72350583 72351821 0 2 929,308, 0,930, -,-, 802433 LINE CR1 1137 chrZ 72362375 72362879 GGLTR3A 785 - 72362375 72362879 0 2 56,108, 0,396, -,-, 802440 LTR ERVL 1137 chrZ 72364880 72366492 GGLTR5A 335 + 72364880 72366492 0 2 406,154, 0,1458, +,+, 802441 LTR ERVL 1137 chrZ 72393484 72394331 CR1-X2 425 + 72393484 72394331 0 2 263,584, 0,263, +,+, 802475 LINE CR1 1137 chrZ 72423964 72424841 Char12Mar1_GG 490 - 72423964 72424841 0 2 832,45, 0,832, -,-, 802493 DNA hAT-Charlie 1137 chrZ 72471346 72473082 GGERVL-B-int 340 - 72471346 72473082 0 2 1370,175, 0,1561, -,-, 802523 LTR ERVL 1138 chrZ 72485814 72485874 (ATTT)n 318 + 72485814 72485874 0 2 15,20, 0,40, +,+, 802530 Simple_repeat Simple_repeat 1138 chrZ 72491533 72492861 CR1-Y3 561 + 72491533 72492861 0 2 489,839, 0,489, +,+, 802534 LINE CR1 1138 chrZ 72494730 72496025 CR1-D 674 + 72494730 72496025 0 2 1093,200, 0,1095, +,+, 802535 LINE CR1 1138 chrZ 72502760 72504405 Char12Mar1_GG 489 - 72502760 72504405 0 2 890,332, 0,1313, -,-, 802543 DNA hAT-Charlie 1138 chrZ 72510147 72511653 CR1-D 631 - 72510147 72511653 0 2 145,1357, 0,149, -,-, 802547 LINE CR1 1139 chrZ 72688575 72688918 Char12Mar1_GG 689 - 72688575 72688918 0 2 115,222, 0,121, -,-, 802644 DNA hAT-Charlie 1139 chrZ 72721256 72722222 CR1-E 720 + 72721256 72722222 0 2 450,516, 0,450, +,+, 802666 LINE CR1 1139 chrZ 72735386 72736584 CR1-C4 601 - 72735386 72736584 0 2 770,428, 0,770, -,-, 802674 LINE CR1 1140 chrZ 72746599 72747273 CR1-C4 504 + 72746599 72747273 0 2 387,287, 0,387, +,+, 802677 LINE CR1 1140 chrZ 72775634 72777678 CR1-C4 549 - 72775634 72777678 0 3 845,221,522, 0,1277,1522, -,-,-, 802696 LINE CR1 1140 chrZ 72816234 72817506 CR1-Y1_Aves 421 + 72816234 72817506 0 2 214,858, 0,414, +,+, 802720 LINE CR1 1140 chrZ 72821011 72822201 GGLTR3C2 479 + 72821011 72822201 0 3 607,145,374, 0,607,816, +,+,+, 802723 LTR ERVL 1140 chrZ 72862290 72863113 CR1-Y1_Aves 399 + 72862290 72863113 0 2 119,704, 0,119, +,+, 802746 LINE CR1 1141 chrZ 72886749 72887648 CR1-Y3 582 - 72886749 72887648 0 2 201,698, 0,201, -,-, 802770 LINE CR1 1141 chrZ 72920472 72920883 GGLTR5B 545 + 72920472 72920883 0 2 347,64, 0,347, +,+, 802793 LTR ERVL 1141 chrZ 72954205 72954835 Char12Mar1_GG 680 - 72954205 72954835 0 2 156,391, 0,239, -,-, 802815 DNA hAT-Charlie 1142 chrZ 73040598 73041986 CR1-E 672 + 73040598 73041986 0 2 391,394, 0,994, +,+, 802875 LINE CR1 1142 chrZ 73065816 73071761 Char12Mar1_GG 552 - 73065816 73071761 0 2 769,78, 0,5867, -,-, 802894 DNA hAT-Charlie 1142 chrZ 73079319 73080252 CR1-C4 586 + 73079319 73080252 0 2 862,71, 0,862, +,+, 802908 LINE CR1 1142 chrZ 73093108 73093625 GGLTR5A 378 + 73093108 73093625 0 2 267,194, 0,323, +,+, 802914 LTR ERVL 1142 chrZ 73110367 73112043 CR1-E 637 + 73110367 73112043 0 2 1622,54, 0,1622, +,+, 802923 LINE CR1 1142 chrZ 73120536 73122181 CR1-Y2_Aves 224 + 73120536 73122181 0 2 764,751, 0,894, +,+, 802932 LINE CR1 1143 chrZ 73145473 73145855 (GAAA)n 873 + 73145473 73145855 0 2 188,180, 0,202, +,+, 802955 Simple_repeat Simple_repeat 1143 chrZ 73153370 73158706 GGLTR3C2 681 - 73153370 73158706 0 3 52,362,218, 0,3261,5118, -,-,-, 802968 LTR ERVL 1143 chrZ 73153422 73156612 GGERVL-A-int 375 - 73153422 73156612 0 3 2882,56,138, 0,2964,3052, -,-,-, 802969 LTR ERVL 1143 chrZ 73172397 73173312 GGERVL-A-int 263 + 73172397 73173312 0 2 260,143, 0,772, +,+, 802980 LTR ERVL 1143 chrZ 73173758 73174304 GGLTR3F1 848 - 73173758 73174304 0 2 495,51, 0,495, -,-, 802983 LTR ERVL 1143 chrZ 73174289 73179723 GGERVL-B-int 827 - 73174289 73179723 0 3 3479,1463,491, 0,3479,4943, -,-,-, 802984 LTR ERVL 1143 chrZ 73186757 73187155 GGLTR8B 447 + 73186757 73187155 0 2 71,300, 0,98, +,+, 802990 LTR ERVL 1143 chrZ 73189368 73198244 GGERV20_I-int 584 - 73189368 73198244 0 4 435,224,115,1043, 0,435,7410,7833, -,-,-,-, 802993 LTR ERVL 1143 chrZ 73190199 73196255 GGLTR11-int 450 + 73190199 73196255 0 5 69,114,918,218,116, 0,96,210,1496,5940, +,+,+,+,+, 802994 LTR ERV1 1143 chrZ 73191906 73193154 CR1-E 741 - 73191906 73193154 0 2 179,1069, 0,179, -,-, 802996 LINE CR1 1143 chrZ 73200415 73202750 GGERVL-A-int 250 + 73200415 73202750 0 2 57,1649, 0,686, +,+, 803004 LTR ERVL 1143 chrZ 73202758 73205124 GGERVL-B-int 521 + 73202758 73205124 0 3 556,136,266, 0,1964,2100, +,+,+, 803006 LTR ERVL 1143 chrZ 73210734 73211897 GGLTR5B 92 - 73210734 73211897 0 2 156,254, 0,909, -,-, 803015 LTR ERVL 1143 chrZ 73216206 73217957 CR1-D2 603 - 73216206 73217957 0 3 857,807,59, 0,859,1692, -,-,-, 803026 LINE CR1 1143 chrZ 73230565 73231660 CR1-E 371 - 73230565 73231660 0 2 88,984, 0,111, -,-, 803032 LINE CR1 1143 chrZ 73232160 73232507 Char12Mar1_GG 605 - 73232160 73232507 0 2 81,184, 0,163, -,-, 803035 DNA hAT-Charlie 1143 chrZ 73259301 73259559 CR1-C4 528 + 73259301 73259559 0 2 72,186, 0,72, +,+, 803052 LINE CR1 1143 chrZ 73261040 73264988 CR1-F2 606 + 73261040 73264988 0 2 404,485, 0,3463, +,+, 803054 LINE CR1 1143 chrZ 73265307 73265899 CR1-C4 537 - 73265307 73265899 0 2 203,389, 0,203, -,-, 803055 LINE CR1 1144 chrZ 73361778 73363027 CR1-Y1_Aves 539 - 73361778 73363027 0 2 329,92, 0,1157, -,-, 803110 LINE CR1 1144 chrZ 73373398 73375059 GGERVL-A-int 310 - 73373398 73375059 0 4 343,122,257,163, 0,519,820,1498, -,-,-,-, 803119 LTR ERVL 1144 chrZ 73375311 73375972 GGLTR5A 271 - 73375311 73375972 0 2 177,439, 0,222, -,-, 803120 LTR ERVL 1144 chrZ 73378128 73383059 CR1-D2 538 - 73378128 73383059 0 3 284,684,828, 0,3407,4103, -,-,-, 803126 LINE CR1 1144 chrZ 73392461 73393268 CR1-C4 516 - 73392461 73393268 0 2 644,163, 0,644, -,-, 803135 LINE CR1 1145 chrZ 73421974 73422284 GGLTR7B 428 + 73421974 73422284 0 2 124,186, 0,124, +,+, 803148 LTR ERV1 1145 chrZ 73422285 73425624 GGLTR11-int 752 + 73422285 73425624 0 5 557,357,119,1313,55, 0,557,914,1033,3284, +,+,+,+,+, 803149 LTR ERV1 1145 chrZ 73443537 73443847 GGLTR7B 428 + 73443537 73443847 0 2 124,186, 0,124, +,+, 803161 LTR ERV1 1145 chrZ 73443848 73446212 GGLTR11-int 756 + 73443848 73446212 0 4 569,357,109,1329, 0,569,926,1035, +,+,+,+, 803162 LTR ERV1 1145 chrZ 73464846 73465156 GGLTR7B 428 + 73464846 73465156 0 2 124,186, 0,124, +,+, 803172 LTR ERV1 1145 chrZ 73465157 73467521 GGLTR11-int 756 + 73465157 73467521 0 4 569,357,109,1329, 0,569,926,1035, +,+,+,+, 803173 LTR ERV1 1145 chrZ 73486134 73486444 GGLTR7B 428 + 73486134 73486444 0 2 124,186, 0,124, +,+, 803182 LTR ERV1 1145 chrZ 73486445 73488811 GGLTR11-int 807 + 73486445 73488811 0 4 557,357,119,1333, 0,557,914,1033, +,+,+,+, 803183 LTR ERV1 1145 chrZ 73507446 73507756 GGLTR7B 428 + 73507446 73507756 0 2 124,186, 0,124, +,+, 803192 LTR ERV1 1145 chrZ 73507757 73511136 GGLTR11 687 + 73507757 73511136 0 4 557,357,1484,55, 0,557,914,3324, +,+,+,+, 803193 LTR ERV1 1145 chrZ 73528514 73528824 GGLTR7B 437 + 73528514 73528824 0 2 124,186, 0,124, +,+, 803202 LTR ERV1 143 chrZ 73528825 73532184 GGLTR11-int 756 + 73528825 73532184 0 5 557,357,119,1333,55, 0,557,914,1033,3304, +,+,+,+,+, 803203 LTR ERV1 1146 chrZ 73558934 73564989 Z-REP 851 - 73558934 73564989 0 2 4256,1739, 0,4316, -,-, 803227 Satellite macro 1146 chrZ 73566590 73566826 CR1-X1 327 + 73566590 73566826 0 2 63,173, 0,63, +,+, 803230 LINE CR1 1146 chrZ 73589926 73595369 Z-REP 898 - 73589926 73595369 0 2 4473,959, 0,4484, -,-, 803245 Satellite macro 1146 chrZ 73596139 73602394 GGLTR7A 785 + 73596139 73602394 0 4 53,4144,1431,615, 0,64,4208,5640, +,+,+,+, 803247 LTR ERV1 1146 chrZ 73625970 73633299 Z-REP 689 - 73625970 73633299 0 2 5524,1749, 0,5580, -,-, 803267 Satellite macro 1147 chrZ 73662517 73662772 CR1-X1 549 + 73662517 73662772 0 2 63,121, 0,134, +,+, 803282 LINE CR1 1147 chrZ 73688450 73694139 GGLTR7A 809 + 73688450 73694139 0 2 5080,609, 0,5080, +,+, 803291 LTR ERV1 1147 chrZ 73694998 73696922 GGLTR7A 847 + 73694998 73696922 0 3 1551,258,113, 0,1552,1811, +,+,+, 803294 LTR ERV1 1147 chrZ 73731282 73737920 Z-REP 892 - 73731282 73737920 0 2 5669,958, 0,5680, -,-, 803317 Satellite macro 1147 chrZ 73738752 73740512 GGLTR7-int 649 + 73738752 73740512 0 4 68,902,74,614, 0,169,1071,1146, +,+,+,+, 803320 LTR ERV1 1147 chrZ 73763656 73766089 Z-REP 767 - 73763656 73766089 0 2 1522,155, 0,2278, -,-, 803334 Satellite macro 1147 chrZ 73766862 73771666 GGLTR7A 794 + 73766862 73771666 0 4 53,39,4081,608, 0,64,115,4196, +,+,+,+, 803337 LTR ERV1 1147 chrZ 73772711 73778103 GGLTR7-int 751 + 73772711 73778103 0 6 65,2571,332,1557,258,114, 0,549,3120,3461,5019,5278, +,+,+,+,+,+, 803341 LTR ERV1 1147 chrZ 73784145 73790841 Z-REP 896 - 73784145 73790841 0 2 5727,958, 0,5738, -,-, 803347 Satellite macro 143 chrZ 73792775 73795954 GGLTR7-int 807 + 73792775 73795954 0 5 1313,37,1455,258,114, 0,1313,1350,2806,3065, +,+,+,+,+, 803351 LTR ERV1 1148 chrZ 73802580 73809726 Z-REP 836 - 73802580 73809726 0 2 5350,1740, 0,5406, -,-, 803356 Satellite macro 1148 chrZ 73811323 73811620 CR1-X2 438 + 73811323 73811620 0 2 62,233, 0,64, +,+, 803359 LINE CR1 1148 chrZ 73829286 73831707 Z-REP 784 - 73829286 73831707 0 2 1510,155, 0,2266, -,-, 803370 Satellite macro 1148 chrZ 73834766 73838486 GGLTR7-int 820 + 73834766 73838486 0 4 1311,363,1430,615, 0,1311,1674,3105, +,+,+,+, 803375 LTR ERV1 1148 chrZ 73847448 73854148 Z-REP 896 - 73847448 73854148 0 2 5730,959, 0,5741, -,-, 803383 Satellite macro 1148 chrZ 73854202 73854546 CR1-F2 430 - 73854202 73854546 0 2 202,128, 0,216, -,-, 803384 LINE CR1 1148 chrZ 73874964 73882405 Z-REP 835 - 73874964 73882405 0 3 5692,827,155, 0,5703,7286, -,-,-, 803398 Satellite macro 1148 chrZ 73883179 73886509 GGLTR7-int 798 + 73883179 73886509 0 3 53,39,3215, 0,64,115, +,+,+, 803401 LTR ERV1 1148 chrZ 73886506 73888763 GGLTR7-int 795 + 73886506 73888763 0 5 73,377,1434,258,113, 0,73,450,1885,2144, +,+,+,+,+, 803402 LTR ERV1 1148 chrZ 73894942 73901536 Z-REP 903 - 73894942 73901536 0 2 5709,874, 0,5720, -,-, 803406 Satellite macro 143 chrZ 73922354 73925936 GGLTR7-int 814 + 73922354 73925936 0 5 1311,332,1550,258,114, 0,1311,1652,3209,3468, +,+,+,+,+, 803427 LTR ERV1 1149 chrZ 73933380 73938744 Z-REP 896 - 73933380 73938744 0 2 4479,874, 0,4490, -,-, 803435 Satellite macro 1149 chrZ 73960258 73967722 Z-REP 772 - 73960258 73967722 0 2 5349,2084, 0,5380, -,-, 803450 Satellite macro 1149 chrZ 73976883 73983817 Z-REP 782 - 73976883 73983817 0 3 5018,1579,296, 0,5045,6638, -,-,-, 803461 Satellite macro 1149 chrZ 73984649 73990588 GGLTR7A 790 + 73984649 73990588 0 4 4134,1431,258,114, 0,4134,5566,5825, +,+,+,+, 803465 LTR ERV1 1149 chrZ 73994595 73994651 (TCCCCA)n 508 + 73994595 73994651 0 2 7,7, 0,49, +,+, 803468 Simple_repeat Simple_repeat 1149 chrZ 74000000 74005720 Z-REP 898 - 74000000 74005720 0 2 4750,959, 0,4761, -,-, 803474 Satellite macro 1149 chrZ 74006488 74012773 GGLTR7A 751 + 74006488 74012773 0 3 53,5975,246, 0,64,6039, +,+,+, 803476 LTR ERV1 1149 chrZ 74012767 74013972 GGLTR7A 837 + 74012767 74013972 0 3 831,259,113, 0,832,1092, +,+,+, 803477 LTR ERV1 1150 chrZ 74083124 74083333 CR1-X1 557 + 74083124 74083333 0 2 63,75, 0,134, +,+, 803508 LINE CR1 1150 chrZ 74102263 74109423 Z-REP 816 - 74102263 74109423 0 2 5361,1743, 0,5417, -,-, 803520 Satellite macro 1150 chrZ 74111027 74111324 CR1-X2 444 + 74111027 74111324 0 2 63,234, 0,63, +,+, 803523 LINE CR1 1150 chrZ 74130791 74136959 Z-REP 892 - 74130791 74136959 0 2 5198,959, 0,5209, -,-, 803534 Satellite macro 1150 chrZ 74140005 74143655 GGLTR7A 820 + 74140005 74143655 0 4 1847,1429,258,114, 0,1847,3277,3536, +,+,+,+, 803538 LTR ERV1 1150 chrZ 74157739 74158036 CR1-X2 474 + 74157739 74158036 0 2 63,234, 0,63, +,+, 803546 LINE CR1 1150 chrZ 74176004 74183291 Z-REP 848 - 74176004 74183291 0 2 6977,296, 0,6991, -,-, 803558 Satellite macro 143 chrZ 74183764 74188955 GGLTR7A 785 + 74183764 74188955 0 5 3748,245,825,289,83, 0,3748,3993,4819,5108, +,+,+,+,+, 803561 LTR ERV1 1151 chrZ 74206494 74206791 CR1-X2 465 + 74206494 74206791 0 2 63,234, 0,63, +,+, 803570 LINE CR1 1151 chrZ 74275789 74282425 Z-REP 831 - 74275789 74282425 0 3 5292,194,1088, 0,5343,5548, -,-,-, 803608 Satellite macro 1151 chrZ 74283195 74289165 GGLTR7A 736 + 74283195 74289165 0 6 92,3606,332,1557,258,114, 0,92,3698,4039,5597,5856, +,+,+,+,+,+, 803611 LTR ERV1 1151 chrZ 74297905 74304576 Z-REP 884 - 74297905 74304576 0 2 5700,960, 0,5711, -,-, 803617 Satellite macro 1151 chrZ 74305350 74309100 GGLTR7-int 649 + 74305350 74309100 0 3 53,165,3517, 0,64,233, +,+,+, 803619 LTR ERV1 1151 chrZ 74309210 74309805 GGLTR7A 743 + 74309210 74309805 0 4 147,74,258,114, 0,147,222,481, +,+,+,+, 803621 LTR ERV1 143 chrZ 74316030 74323547 Z-REP 857 - 74316030 74323547 0 2 5469,1997, 0,5520, -,-, 803627 Satellite macro 1152 chrZ 74323572 74323916 CR1-F2 359 - 74323572 74323916 0 2 232,112, 0,232, -,-, 803629 LINE CR1 1152 chrZ 74339946 74341665 GGLTR7A 799 + 74339946 74341665 0 3 1345,258,114, 0,1346,1605, +,+,+, 803642 LTR ERV1 1152 chrZ 74374176 74380867 Z-REP 894 - 74374176 74380867 0 2 5721,959, 0,5732, -,-, 803660 Satellite macro 1152 chrZ 74381123 74381265 CR1-F0 399 - 74381123 74381265 0 2 41,101, 0,41, -,-, 803662 LINE CR1 1152 chrZ 74398661 74402985 GGLTR7A 813 + 74398661 74402985 0 2 4079,245, 0,4079, +,+, 803674 LTR ERV1 1152 chrZ 74402979 74404184 GGLTR7A 837 + 74402979 74404184 0 3 831,259,113, 0,832,1092, +,+,+, 803675 LTR ERV1 1152 chrZ 74412565 74419912 Z-REP 795 - 74412565 74419912 0 3 5335,1587,383, 0,5362,6964, -,-,-, 803682 Satellite macro 1152 chrZ 74419937 74420239 CR1-F2 385 - 74419937 74420239 0 2 243,59, 0,243, -,-, 803684 LINE CR1 1152 chrZ 74423020 74423317 CR1-X2 465 + 74423020 74423317 0 2 62,226, 0,71, +,+, 803686 LINE CR1 1152 chrZ 74436623 74439001 Z-REP 781 - 74436623 74439001 0 2 1467,155, 0,2223, -,-, 803694 Satellite macro 1152 chrZ 74439826 74444619 GGLTR7-int 750 + 74439826 74444619 0 5 2521,332,1552,259,115, 0,2521,2862,4419,4678, +,+,+,+,+, 803698 LTR ERV1 1153 chrZ 74463737 74467622 GGLTR7-int 825 + 74463737 74467622 0 3 1849,1420,615, 0,1849,3270, +,+,+, 803708 LTR ERV1 1153 chrZ 74477719 74483148 Z-REP 905 - 74477719 74483148 0 2 4459,959, 0,4470, -,-, 803718 Satellite macro 1153 chrZ 74483916 74489787 GGLTR7A 787 + 74483916 74489787 0 6 53,3535,325,1557,258,114, 0,64,3606,3940,5498,5757, +,+,+,+,+,+, 803720 LTR ERV1 1154 chrZ 74589144 74589441 CR1-X2 463 - 74589144 74589441 0 2 233,63, 0,234, -,-, 803747 LINE CR1 1154 chrZ 74592577 74599851 Z-REP 842 + 74592577 74599851 0 2 293,6967, 0,307, +,+, 803752 Satellite macro 1154 chrZ 74605783 74608118 GGLTR7-int 843 - 74605783 74608118 0 5 113,258,1558,336,59, 0,114,373,1940,2276, -,-,-,-,-, 803757 LTR ERV1 1154 chrZ 74610728 74618168 Z-REP 843 + 74610728 74618168 0 3 155,816,5702, 0,911,1738, +,+,+, 803761 Satellite macro 1154 chrZ 74636368 74636648 CR1-X2 446 - 74636368 74636648 0 2 223,57, 0,223, -,-, 803773 LINE CR1 1154 chrZ 74676595 74676745 G-rich 599 + 74676595 74676745 0 2 38,59, 0,91, +,+, 803788 Low_complexity Low_complexity 1154 chrZ 74680753 74684231 GGLTR7-int 806 - 74680753 74684231 0 5 114,258,1444,352,1307, 0,115,375,1819,2171, -,-,-,-,-, 803791 LTR ERV1 1154 chrZ 74684239 74686230 Z-REP 885 + 74684239 74686230 0 2 849,1116, 0,875, +,+, 803792 Satellite macro 1154 chrZ 74699525 74699818 CR1-X2 424 - 74699525 74699818 0 2 237,56, 0,237, -,-, 803798 LINE CR1 1154 chrZ 74702937 74709523 Z-REP 866 + 74702937 74709523 0 3 297,606,5658, 0,311,928, +,+,+, 803803 Satellite macro 1155 chrZ 74713564 74713714 G-rich 544 + 74713564 74713714 0 2 38,59, 0,91, +,+, 803806 Low_complexity Low_complexity 1155 chrZ 74718029 74722245 GGLTR7-int 762 - 74718029 74722245 0 5 615,1557,336,136,552, 0,616,2182,2518,3664, -,-,-,-,-, 803809 LTR ERV1 1155 chrZ 74723077 74729784 Z-REP 894 + 74723077 74729784 0 2 959,5737, 0,970, +,+, 803813 Satellite macro 1155 chrZ 74802819 74810410 Z-REP 861 + 74802819 74810410 0 3 2014,4457,1017, 0,2066,6574, +,+,+, 803859 Satellite macro 1155 chrZ 74831624 74838669 Z-REP 797 + 74831624 74838669 0 2 1466,5552, 0,1493, +,+, 803876 Satellite macro 1156 chrZ 74844979 74849821 GGLTR7-int 741 - 74844979 74849821 0 7 114,258,1557,337,264,169,68, 0,115,374,1940,2277,2541,4774, -,-,-,-,-,-,-, 803883 LTR ERV1 1156 chrZ 74850655 74857329 Z-REP 886 + 74850655 74857329 0 2 959,5704, 0,970, +,+, 803887 Satellite macro 1156 chrZ 74901355 74901652 CR1-X2 449 - 74901355 74901652 0 2 234,63, 0,234, -,-, 803914 LINE CR1 1156 chrZ 74931324 74931621 CR1-X2 469 - 74931324 74931621 0 2 234,63, 0,234, -,-, 803927 LINE CR1 1156 chrZ 74933854 74940460 Z-REP 886 + 74933854 74940460 0 2 960,5635, 0,971, +,+, 803931 Satellite macro 1156 chrZ 74944550 74944700 G-rich 599 + 74944550 74944700 0 2 37,60, 0,90, +,+, 803935 Low_complexity Low_complexity 1156 chrZ 74946346 74952175 GGLTR7-int 716 - 74946346 74952175 0 5 133,240,1558,3267,68, 0,133,374,1941,5761, -,-,-,-,-, 803937 LTR ERV1 1156 chrZ 74952997 74959542 Z-REP 897 + 74952997 74959542 0 2 958,5576, 0,969, +,+, 803941 Satellite macro 1156 chrZ 74965011 74969170 GGLTR7-int 779 - 74965011 74969170 0 5 614,913,411,896,968, 0,615,1532,1943,3191, -,-,-,-,-, 803946 LTR ERV1 1157 chrZ 74980743 74981040 CR1-X1 419 - 74980743 74981040 0 2 241,56, 0,241, -,-, 803955 LINE CR1 1157 chrZ 74994417 74994564 G-rich 570 + 74994417 74994564 0 2 38,57, 0,90, +,+, 803959 Low_complexity Low_complexity 1157 chrZ 74996524 75000000 GGLTR7-int 820 - 74996524 75000000 0 4 614,1442,355,1064, 0,615,2057,2412, -,-,-,-, 803961 LTR ERV1 1157 chrZ 75000000 75002602 GGLTR7-int 773 - 75000000 75002602 0 3 326,47,53, 0,2491,2549, -,-,-, 803962 LTR ERV1 1157 chrZ 75019893 75020178 CR1-X2 456 - 75019893 75020178 0 2 229,56, 0,229, -,-, 803975 LINE CR1 1157 chrZ 75021782 75029071 Z-REP 859 + 75021782 75029071 0 2 1738,5495, 0,1794, +,+, 803977 Satellite macro 1157 chrZ 75032771 75032918 G-rich 585 + 75032771 75032918 0 2 37,57, 0,90, +,+, 803980 Low_complexity Low_complexity 1157 chrZ 75034883 75035718 GGLTR7-int 737 - 75034883 75035718 0 3 614,70,146, 0,615,689, -,-,-, 803982 LTR ERV1 1157 chrZ 75054842 75055139 CR1-X2 465 - 75054842 75055139 0 2 234,63, 0,234, -,-, 803996 LINE CR1 1157 chrZ 75067989 75068139 G-rich 599 + 75067989 75068139 0 2 37,60, 0,90, +,+, 804002 Low_complexity Low_complexity 1157 chrZ 75070094 75070929 GGLTR7-int 719 - 75070094 75070929 0 3 614,75,145, 0,615,690, -,-,-, 804004 LTR ERV1 1158 chrZ 75117267 75117414 G-rich 604 + 75117267 75117414 0 2 37,57, 0,90, +,+, 804033 Low_complexity Low_complexity 1158 chrZ 75119377 75126441 GGLTR7A 791 - 75119377 75126441 0 6 114,258,853,217,1483,4137, 0,115,374,1227,1444,2927, -,-,-,-,-,-, 804035 LTR ERV1 1158 chrZ 75127262 75133740 Z-REP 893 + 75127262 75133740 0 2 960,5507, 0,971, +,+, 804038 Satellite macro 1158 chrZ 75137526 75137680 G-rich 499 + 75137526 75137680 0 2 44,59, 0,95, +,+, 804040 Low_complexity Low_complexity 1158 chrZ 75141970 75145552 GGLTR7-int 829 - 75141970 75145552 0 5 113,258,1551,336,1309, 0,114,377,1937,2273, -,-,-,-,-, 804043 LTR ERV1 1158 chrZ 75148603 75155760 Z-REP 845 + 75148603 75155760 0 2 296,6847, 0,310, +,+, 804047 Satellite macro 1158 chrZ 75172120 75172417 CR1-X2 465 - 75172120 75172417 0 2 234,63, 0,234, -,-, 804057 LINE CR1 1158 chrZ 75184945 75185092 G-rich 562 + 75184945 75185092 0 2 38,56, 0,91, +,+, 804063 Low_complexity Low_complexity 1158 chrZ 75186734 75190290 GGLTR7-int 802 - 75186734 75190290 0 5 113,258,1531,336,1307, 0,114,373,1913,2249, -,-,-,-,-, 804065 LTR ERV1 1158 chrZ 75203864 75204024 G-rich 537 + 75203864 75204024 0 2 39,70, 0,90, +,+, 804069 Low_complexity Low_complexity 1158 chrZ 75205673 75209258 GGLTR7-int 814 - 75205673 75209258 0 5 113,255,1552,334,1317, 0,113,373,1934,2268, -,-,-,-,-, 804071 LTR ERV1 1158 chrZ 75209266 75216979 Z-REP 789 + 75209266 75216979 0 3 848,1581,5227, 0,874,2486, +,+,+, 804072 Satellite macro 1158 chrZ 75232970 75233244 CR1-X2 480 - 75232970 75233244 0 2 218,56, 0,218, -,-, 804083 LINE CR1 1159 chrZ 75246502 75246642 G-rich 597 + 75246502 75246642 0 2 37,50, 0,90, +,+, 804088 Low_complexity Low_complexity 1159 chrZ 75248607 75252995 GGLTR7-int 740 - 75248607 75252995 0 6 113,258,1557,336,203,68, 0,114,373,1939,2275,4320, -,-,-,-,-,-, 804090 LTR ERV1 1159 chrZ 75253826 75261405 Z-REP 861 + 75253826 75261405 0 2 2009,5518, 0,2061, +,+, 804094 Satellite macro 1159 chrZ 75267660 75270071 GGLTR7-int 794 - 75267660 75270071 0 5 113,259,1556,336,136, 0,113,374,1939,2275, -,-,-,-,-, 804100 LTR ERV1 1159 chrZ 75270041 75279716 Z-REP 692 + 75270041 75279716 0 2 8273,1237, 0,8438, +,+, 804101 Satellite macro 1159 chrZ 75304151 75312143 Z-REP 854 + 75304151 75312143 0 2 1528,5820, 0,2172, +,+, 804123 Satellite macro 1159 chrZ 75329410 75329688 CR1-X2 385 - 75329410 75329688 0 2 215,63, 0,215, -,-, 804134 LINE CR1 1159 chrZ 75332052 75337505 Z-REP 905 + 75332052 75337505 0 2 959,4483, 0,970, +,+, 804138 Satellite macro 1159 chrZ 75343150 75343305 G-rich 585 + 75343150 75343305 0 2 37,62, 0,93, +,+, 804142 Low_complexity Low_complexity 1159 chrZ 75345272 75346101 GGLTR7-int 726 - 75345272 75346101 0 3 607,75,146, 0,608,683, -,-,-, 804144 LTR ERV1 1159 chrZ 75346211 75349299 GGLTR7-int 799 - 75346211 75349299 0 3 2973,39,53, 0,2985,3035, -,-,-, 804146 LTR ERV1 1159 chrZ 75350073 75358306 Z-REP 822 + 75350073 75358306 0 2 155,7322, 0,911, +,+, 804148 Satellite macro 1160 chrZ 75374824 75375102 CR1-X2 338 - 75374824 75375102 0 2 215,63, 0,215, -,-, 804161 LINE CR1 1160 chrZ 75376427 75383008 Z-REP 875 + 75376427 75383008 0 3 851,4676,1004, 0,862,5577, +,+,+, 804163 Satellite macro 1160 chrZ 75387719 75387782 (GTGTGG)n 526 + 75387719 75387782 0 2 8,13, 0,50, +,+, 804168 Simple_repeat Simple_repeat 1160 chrZ 75431137 75435705 GGLTR7-int 746 - 75431137 75435705 0 7 114,258,1557,336,1307,165,53, 0,115,374,1940,2276,4339,4515, -,-,-,-,-,-,-, 804197 LTR ERV1 1160 chrZ 75436669 75443390 GGLTR7A 794 - 75436669 75443390 0 3 609,6048,53, 0,609,6668, -,-,-, 804201 LTR ERV1 1160 chrZ 75444142 75450854 Z-REP 899 + 75444142 75450854 0 2 959,5742, 0,970, +,+, 804203 Satellite macro 1160 chrZ 75468599 75468896 CR1-X2 465 - 75468599 75468896 0 2 234,63, 0,234, -,-, 804212 LINE CR1 1160 chrZ 75482146 75482299 G-rich 592 + 75482146 75482299 0 2 38,58, 0,95, +,+, 804218 Low_complexity Low_complexity 1160 chrZ 75484263 75485092 GGLTR7-int 726 - 75484263 75485092 0 3 607,75,146, 0,608,683, -,-,-, 804220 LTR ERV1 2 chrZ 75494947 75500000 Z-REP 872 + 75494947 75500000 0 2 851,4191, 0,862, +,+, 804230 Satellite macro 1161 chrZ 75523564 75523842 CR1-X2 338 - 75523564 75523842 0 2 215,63, 0,215, -,-, 804245 LINE CR1 1161 chrZ 75525167 75531543 Z-REP 868 + 75525167 75531543 0 2 852,5513, 0,863, +,+, 804247 Satellite macro 1161 chrZ 75550715 75557987 Z-REP 858 + 75550715 75557987 0 2 1745,5471, 0,1801, +,+, 804260 Satellite macro 1161 chrZ 75576737 75582788 Z-REP 867 + 75576737 75582788 0 2 1736,4267, 0,1784, +,+, 804275 Satellite macro 1161 chrZ 75601789 75602086 CR1-X2 429 - 75601789 75602086 0 2 233,62, 0,235, -,-, 804286 LINE CR1 1161 chrZ 75603682 75610736 Z-REP 844 + 75603682 75610736 0 2 1721,5281, 0,1773, +,+, 804288 Satellite macro 1161 chrZ 75616977 75620068 GGLTR7-int 772 - 75616977 75620068 0 6 113,258,1552,336,136,70, 0,114,377,1938,2274,3021, -,-,-,-,-,-, 804294 LTR ERV1 1161 chrZ 75620902 75628347 Z-REP 529 + 75620902 75628347 0 3 296,1598,5510, 0,310,1935, +,+,+, 804298 Satellite macro 1162 chrZ 75648643 75656944 Z-REP 864 + 75648643 75656944 0 2 1524,6135, 0,2166, +,+, 804316 Satellite macro 1162 chrZ 75675896 75676193 CR1-X2 442 - 75675896 75676193 0 2 234,63, 0,234, -,-, 804327 LINE CR1 1162 chrZ 75678917 75679261 CR1-F2 375 + 75678917 75679261 0 2 45,232, 0,112, +,+, 804330 LINE CR1 1162 chrZ 75679315 75685941 Z-REP 857 + 75679315 75685941 0 4 297,606,192,5480, 0,311,928,1146, +,+,+,+, 804332 Satellite macro 1162 chrZ 75694591 75700777 GGLTR7-int 787 - 75694591 75700777 0 3 616,1446,4123, 0,617,2063, -,-,-, 804339 LTR ERV1 1162 chrZ 75701611 75709155 Z-REP 822 + 75701611 75709155 0 2 2034,5478, 0,2066, +,+, 804342 Satellite macro 1162 chrZ 75724720 75724998 CR1-X2 392 - 75724720 75724998 0 2 215,63, 0,215, -,-, 804353 LINE CR1 1162 chrZ 75727736 75728080 CR1-F2 394 + 75727736 75728080 0 2 45,243, 0,101, +,+, 804356 LINE CR1 1162 chrZ 75745258 75752054 Z-REP 848 + 75745258 75752054 0 2 2066,4687, 0,2109, +,+, 804369 Satellite macro 1163 chrZ 75760524 75765726 GGLTR7A 813 - 75760524 75765726 0 5 113,258,859,218,3752, 0,114,373,1232,1450, -,-,-,-,-, 804376 LTR ERV1 1163 chrZ 75768779 75775246 Z-REP 892 + 75768779 75775246 0 2 959,5497, 0,970, +,+, 804380 Satellite macro 1163 chrZ 75779457 75779618 G-rich 581 + 75779457 75779618 0 2 37,70, 0,91, +,+, 804382 Low_complexity Low_complexity 1163 chrZ 75810288 75817854 Z-REP 881 + 75810288 75817854 0 2 6180,1218, 0,6348, +,+, 804400 Satellite macro 1163 chrZ 75821799 75821930 G-rich 654 + 75821799 75821930 0 2 37,41, 0,90, +,+, 804404 Low_complexity Low_complexity 1163 chrZ 75823909 75827466 GGLTR7A 763 - 75823909 75827466 0 4 114,258,1531,1643, 0,115,374,1914, -,-,-,-, 804406 LTR ERV1 1163 chrZ 75830520 75837212 Z-REP 884 + 75830520 75837212 0 2 959,5722, 0,970, +,+, 804410 Satellite macro 1163 chrZ 75841413 75841573 G-rich 561 + 75841413 75841573 0 2 37,60, 0,100, +,+, 804413 Low_complexity Low_complexity 1163 chrZ 75871021 75871154 CR1-X1 454 - 75871021 75871154 0 2 66,62, 0,71, -,-, 804435 LINE CR1 1163 chrZ 75872769 75878673 Z-REP 877 + 75872769 75878673 0 2 4867,1010, 0,4894, +,+, 804437 Satellite macro 1164 chrZ 75903066 75910596 Z-REP 869 + 75903066 75910596 0 2 1993,5481, 0,2049, +,+, 804454 Satellite macro 1164 chrZ 75927590 75927887 CR1-X2 434 - 75927590 75927887 0 2 241,56, 0,241, -,-, 804466 LINE CR1 1164 chrZ 75929492 75936083 Z-REP 876 + 75929492 75936083 0 2 850,5730, 0,861, +,+, 804468 Satellite macro 1164 chrZ 75940193 75940353 G-rich 581 + 75940193 75940353 0 2 37,70, 0,90, +,+, 804470 Low_complexity Low_complexity 1164 chrZ 75976022 75980603 GGLTR7-int 779 - 75976022 75980603 0 5 614,913,526,868,1287, 0,615,1530,2065,3294, -,-,-,-,-, 804492 LTR ERV1 1164 chrZ 75981492 75983892 Z-REP 788 + 75981492 75983892 0 2 155,1489, 0,911, +,+, 804495 Satellite macro 1164 chrZ 76002663 76008113 Z-REP 896 + 76002663 76008113 0 2 959,4480, 0,970, +,+, 804515 Satellite macro 1165 chrZ 76026598 76026895 CR1-X2 469 - 76026598 76026895 0 2 234,63, 0,234, -,-, 804525 LINE CR1 1165 chrZ 76057252 76064366 Z-REP 832 + 76057252 76064366 0 2 211,6889, 0,225, +,+, 804545 Satellite macro 1165 chrZ 76082170 76082425 CR1-X2 417 - 76082170 76082425 0 2 192,63, 0,192, -,-, 804557 LINE CR1 1165 chrZ 76084348 76084651 CR1-F2 499 + 76084348 76084651 0 2 87,216, 0,87, +,+, 804559 LINE CR1 1165 chrZ 76096242 76096389 G-rich 586 + 76096242 76096389 0 2 37,57, 0,90, +,+, 804563 Low_complexity Low_complexity 1165 chrZ 76098040 76099753 GGLTR7A 800 - 76098040 76099753 0 3 113,255,1340, 0,113,373, -,-,-, 804565 LTR ERV1 1165 chrZ 76112149 76112446 CR1-X2 450 - 76112149 76112446 0 2 241,56, 0,241, -,-, 804572 LINE CR1 1165 chrZ 76125635 76125793 G-rich 574 + 76125635 76125793 0 2 37,68, 0,90, +,+, 804576 Low_complexity Low_complexity 1166 chrZ 76191244 76198106 Z-REP 870 + 76191244 76198106 0 2 1160,5691, 0,1171, +,+, 804615 Satellite macro 1166 chrZ 76204187 76204782 GGLTR7A 751 - 76204187 76204782 0 4 114,258,70,147, 0,115,374,448, -,-,-,-, 804620 LTR ERV1 1166 chrZ 76204790 76206484 Z-REP 927 + 76204790 76206484 0 2 90,649, 0,1045, +,+, 804621 Satellite macro 1166 chrZ 76204892 76205865 GGLTR7-int 798 - 76204892 76205865 0 3 492,336,136, 0,501,837, -,-,-, 804622 LTR ERV1 1166 chrZ 76223623 76230852 Z-REP 765 + 76223623 76230852 0 2 1854,5348, 0,1881, +,+, 804638 Satellite macro 1166 chrZ 76248021 76253358 Z-REP 878 + 76248021 76253358 0 2 849,4477, 0,860, +,+, 804652 Satellite macro 1166 chrZ 76259145 76259276 G-rich 654 + 76259145 76259276 0 2 37,41, 0,90, +,+, 804657 Low_complexity Low_complexity 1166 chrZ 76261255 76265207 GGLTR7-int 759 - 76261255 76265207 0 6 114,258,1531,336,136,68, 0,115,374,1914,2250,3884, -,-,-,-,-,-, 804659 LTR ERV1 1166 chrZ 76266034 76272731 Z-REP 901 + 76266034 76272731 0 2 959,5727, 0,970, +,+, 804663 Satellite macro 1167 chrZ 76291778 76299171 Z-REP 871 + 76291778 76299171 0 3 1679,4287,1211, 0,1727,6182, +,+,+, 804679 Satellite macro 1167 chrZ 76317960 76318257 CR1-X2 449 - 76317960 76318257 0 2 234,63, 0,234, -,-, 804693 LINE CR1 1167 chrZ 76346874 76347218 CR1-F2 382 + 76346874 76347218 0 2 42,232, 0,112, +,+, 804708 LINE CR1 1167 chrZ 76347243 76356665 Z-REP 881 + 76347243 76356665 0 3 875,2880,5634, 0,886,3788, +,+,+, 804710 Satellite macro 1167 chrZ 76374731 76375009 CR1-X2 363 - 76374731 76375009 0 2 222,56, 0,222, -,-, 804718 LINE CR1 1168 chrZ 76416760 76416907 G-rich 520 + 76416760 76416907 0 2 37,56, 0,91, +,+, 804741 Low_complexity Low_complexity 1168 chrZ 76421213 76421903 GGLTR7A 755 - 76421213 76421903 0 2 614,75, 0,615, -,-, 804744 LTR ERV1 1168 chrZ 76425106 76433459 Z-REP 911 + 76425106 76433459 0 2 959,7383, 0,970, +,+, 804748 Satellite macro 1168 chrZ 76448769 76451925 GGERV10_LTR 974 - 76448769 76451925 0 2 220,2936, 0,220, -,-, 804760 LTR ERVL 1168 chrZ 76457489 76464888 Z-REP 831 + 76457489 76464888 0 2 1854,5518, 0,1881, +,+, 804767 Satellite macro 1168 chrZ 76497696 76500000 GGLTR7-int 827 - 76497696 76500000 0 3 614,1557,123, 0,615,2181, -,-,-, 804787 LTR ERV1 1168 chrZ 76500001 76502501 GGLTR7-int 658 - 76500001 76502501 0 4 194,1321,165,53, 0,194,2271,2447, -,-,-,-, 804788 LTR ERV1 1168 chrZ 76503271 76510891 Z-REP 873 + 76503271 76510891 0 3 468,1664,5446, 0,484,2174, +,+,+, 804791 Satellite macro 1168 chrZ 76534309 76534647 CR1-F2 398 + 76534309 76534647 0 2 128,210, 0,128, +,+, 804808 LINE CR1 1168 chrZ 76534707 76541248 Z-REP 897 + 76534707 76541248 0 2 959,5571, 0,970, +,+, 804809 Satellite macro 1169 chrZ 76601902 76609175 Z-REP 589 + 76601902 76609175 0 2 1733,5484, 0,1789, +,+, 804849 Satellite macro 1169 chrZ 76613501 76613632 G-rich 660 + 76613501 76613632 0 2 38,41, 0,90, +,+, 804853 Low_complexity Low_complexity 1169 chrZ 76615610 76621469 GGLTR7A 778 - 76615610 76621469 0 6 114,258,1557,336,3519,53, 0,115,374,1940,2276,5806, -,-,-,-,-,-, 804855 LTR ERV1 1169 chrZ 76622237 76628922 Z-REP 863 + 76622237 76628922 0 2 937,5737, 0,948, +,+, 804857 Satellite macro 1169 chrZ 76632988 76633135 G-rich 585 + 76632988 76633135 0 2 37,57, 0,90, +,+, 804860 Low_complexity Low_complexity 1169 chrZ 76637475 76642677 GGLTR7A 782 - 76637475 76642677 0 5 113,259,853,217,3759, 0,113,373,1226,1443, -,-,-,-,-, 804863 LTR ERV1 1169 chrZ 76662923 76663267 CR1-F2 353 + 76662923 76663267 0 2 42,232, 0,112, +,+, 804878 LINE CR1 1169 chrZ 76663321 76670564 Z-REP 803 + 76663321 76670564 0 3 296,1586,5320, 0,310,1923, +,+,+, 804880 Satellite macro 1170 chrZ 76693229 76693573 CR1-F2 361 + 76693229 76693573 0 2 42,232, 0,112, +,+, 804896 LINE CR1 1170 chrZ 76693598 76700336 Z-REP 836 + 76693598 76700336 0 3 874,192,5631, 0,885,1107, +,+,+, 804898 Satellite macro 1170 chrZ 76704372 76704522 G-rich 544 + 76704372 76704522 0 2 38,59, 0,91, +,+, 804902 Low_complexity Low_complexity 1170 chrZ 76708858 76709453 GGLTR7A 754 - 76708858 76709453 0 4 113,259,75,146, 0,114,374,449, -,-,-,-, 804905 LTR ERV1 1170 chrZ 76709637 76714537 GGLTR7-int 802 - 76709637 76714537 0 6 820,217,830,2912,39,53, 0,820,1037,1873,4797,4847, -,-,-,-,-,-, 804908 LTR ERV1 1170 chrZ 76716221 76723704 Z-REP 427 + 76716221 76723704 0 3 1982,4074,1235, 0,2009,6248, +,+,+, 804912 Satellite macro 1170 chrZ 76741052 76741349 CR1-X2 435 - 76741052 76741349 0 2 234,63, 0,234, -,-, 804925 LINE CR1 1170 chrZ 76758957 76759099 G-rich 592 + 76758957 76759099 0 2 37,49, 0,93, +,+, 804937 Low_complexity Low_complexity 1170 chrZ 76760745 76761947 GGLTR7A 837 - 76760745 76761947 0 3 113,258,829, 0,114,373, -,-,-, 804939 LTR ERV1 1170 chrZ 76761941 76766372 GGLTR7A 794 - 76761941 76766372 0 4 245,4071,39,53, 0,245,4328,4378, -,-,-,-, 804940 LTR ERV1 1170 chrZ 76767146 76768586 Z-REP 854 + 76767146 76768586 0 2 296,1130, 0,310, +,+, 804942 Satellite macro 1171 chrZ 76861045 76861343 CR1-X2 445 + 76861045 76861343 0 2 63,235, 0,63, +,+, 804969 LINE CR1 1171 chrZ 76883986 76890222 Z-REP 812 - 76883986 76890222 0 3 4302,1596,297, 0,4329,5939, -,-,-, 804990 Satellite macro 1171 chrZ 76893363 76893618 CR1-X2 412 + 76893363 76893618 0 2 63,192, 0,63, +,+, 804995 LINE CR1 1171 chrZ 76911339 76913291 GGLTR7A 819 + 76911339 76913291 0 2 1332,615, 0,1337, +,+, 805004 LTR ERV1 1171 chrZ 76919075 76925905 Z-REP 850 - 76919075 76925905 0 2 5467,1307, 0,5523, -,-, 805010 Satellite macro 1171 chrZ 76926877 76927174 CR1-X2 460 + 76926877 76927174 0 2 62,233, 0,64, +,+, 805013 LINE CR1 1172 chrZ 76942198 76949458 Z-REP 809 - 76942198 76949458 0 3 5326,1597,296, 0,5353,6964, -,-,-, 805026 Satellite macro 1172 chrZ 76950226 76956161 GGLTR7A 738 + 76950226 76956161 0 5 53,4072,1429,254,115, 0,64,4136,5566,5820, +,+,+,+,+, 805029 LTR ERV1 1172 chrZ 76966084 76975964 Z-REP 603 - 76966084 76975964 0 2 5350,4503, 0,5377, -,-, 805038 Satellite macro 1172 chrZ 76974738 76980045 GGLTR7A 773 + 76974738 76980045 0 2 5062,245, 0,5062, +,+, 805040 LTR ERV1 1172 chrZ 76980039 76981243 GGLTR7A 842 + 76980039 76981243 0 3 831,258,113, 0,832,1091, +,+,+, 805041 LTR ERV1 1172 chrZ 76987281 76994956 Z-REP 789 - 76987281 76994956 0 2 5471,2174, 0,5501, -,-, 805047 Satellite macro 1172 chrZ 77014510 77021221 Z-REP 895 - 77014510 77021221 0 2 5741,959, 0,5752, -,-, 805062 Satellite macro 1172 chrZ 77024264 77027917 GGLTR7A 822 + 77024264 77027917 0 4 1849,1430,258,114, 0,1849,3280,3539, +,+,+,+, 805066 LTR ERV1 1172 chrZ 77034224 77040894 Z-REP 892 - 77034224 77040894 0 2 5700,959, 0,5711, -,-, 805072 Satellite macro 1172 chrZ 77041668 77046655 GGLTR7A 695 + 77041668 77046655 0 4 53,165,3757,245, 0,64,985,4742, +,+,+,+, 805074 LTR ERV1 1172 chrZ 77046649 77047853 GGLTR7A 840 + 77046649 77047853 0 3 826,259,113, 0,831,1091, +,+,+, 805076 LTR ERV1 1172 chrZ 77062595 77062892 CR1-X2 446 + 77062595 77062892 0 2 63,234, 0,63, +,+, 805084 LINE CR1 1173 chrZ 77079929 77086645 Z-REP 887 - 77079929 77086645 0 2 5738,967, 0,5749, -,-, 805094 Satellite macro 1173 chrZ 77133892 77140403 Z-REP 858 - 77133892 77140403 0 2 5433,1022, 0,5489, -,-, 805123 Satellite macro 1173 chrZ 77166991 77167288 CR1-X2 444 + 77166991 77167288 0 2 63,234, 0,63, +,+, 805136 LINE CR1 1173 chrZ 77191586 77191732 CR1-G 612 - 77191586 77191732 0 2 45,86, 0,60, -,-, 805149 LINE CR1 1174 chrZ 77208800 77210235 Z-REP 855 - 77208800 77210235 0 2 1125,296, 0,1139, -,-, 805160 Satellite macro 1174 chrZ 77211005 77216420 GGLTR7A 702 + 77211005 77216420 0 4 53,165,4573,609, 0,64,233,4806, +,+,+,+, 805162 LTR ERV1 1174 chrZ 77219688 77222970 GGLTR7-int 815 + 77219688 77222970 0 5 1313,298,1299,257,113, 0,1313,1611,2911,3169, +,+,+,+,+, 805167 LTR ERV1 1174 chrZ 77238809 77241215 GGLTR7-int 811 + 77238809 77241215 0 5 140,332,1548,258,113, 0,140,481,2034,2293, +,+,+,+,+, 805174 LTR ERV1 1174 chrZ 77258880 77259177 CR1-X2 469 + 77258880 77259177 0 2 63,234, 0,63, +,+, 805185 LINE CR1 1174 chrZ 77276865 77285362 Z-REP 845 - 77276865 77285362 0 2 7586,155, 0,8342, -,-, 805195 Satellite macro 1174 chrZ 77286136 77289225 GGLTR7-int 799 + 77286136 77289225 0 3 53,39,2974, 0,64,115, +,+,+, 805198 LTR ERV1 1174 chrZ 77289335 77290171 GGLTR7-int 726 + 77289335 77290171 0 3 147,74,614, 0,147,222, +,+,+, 805200 LTR ERV1 1174 chrZ 77296087 77302742 Z-REP 901 - 77296087 77302742 0 2 5685,959, 0,5696, -,-, 805205 Satellite macro 1174 chrZ 77305789 77310152 GGLTR7A 840 + 77305789 77310152 0 2 3754,609, 0,3754, +,+, 805209 LTR ERV1 1174 chrZ 77311199 77315169 GGLTR7-int 790 + 77311199 77315169 0 6 68,142,330,1552,258,113, 0,1560,1702,2041,3598,3857, +,+,+,+,+,+, 805213 LTR ERV1 1174 chrZ 77323945 77330358 Z-REP 882 - 77323945 77330358 0 2 5443,959, 0,5454, -,-, 805220 Satellite macro 146 chrZ 77331194 77335381 GGLTR7-int 704 + 77331194 77335381 0 6 165,2157,361,713,172,614, 0,169,2326,2687,3400,3573, +,+,+,+,+,+, 805223 LTR ERV1 1175 chrZ 77341574 77348934 Z-REP 358 - 77341574 77348934 0 2 5510,1819, 0,5541, -,-, 805228 Satellite macro 1175 chrZ 77350542 77350839 CR1-X2 412 + 77350542 77350839 0 2 63,234, 0,63, +,+, 805231 LINE CR1 1175 chrZ 77367799 77374491 Z-REP 897 - 77367799 77374491 0 2 5723,958, 0,5734, -,-, 805240 Satellite macro 1175 chrZ 77377294 77379036 GGLTR7-int 805 + 77377294 77379036 0 6 142,330,542,342,258,113, 0,142,481,1023,1370,1629, +,+,+,+,+,+, 805244 LTR ERV1 1175 chrZ 77385294 77388386 GGERV28_I-int 155 + 77385294 77388386 0 3 642,173,1979, 0,913,1113, +,+,+, 805249 LTR ERVK 1175 chrZ 77392919 77399405 Z-REP 360 - 77392919 77399405 0 2 4474,1981, 0,4505, -,-, 805252 Satellite macro 1175 chrZ 77401205 77405527 GGLTR7A 797 + 77401205 77405527 0 2 4077,245, 0,4077, +,+, 805258 LTR ERV1 1175 chrZ 77405521 77406725 GGLTR7A 803 + 77405521 77406725 0 3 831,258,113, 0,832,1091, +,+,+, 805259 LTR ERV1 1175 chrZ 77422997 77428801 GGLTR7-int 780 + 77422997 77428801 0 5 3532,332,1557,258,114, 0,3532,3873,5431,5690, +,+,+,+,+, 805266 LTR ERV1 1175 chrZ 77438303 77443747 Z-REP 901 - 77438303 77443747 0 2 4474,959, 0,4485, -,-, 805274 Satellite macro 1175 chrZ 77446801 77450080 GGLTR7-int 735 + 77446801 77450080 0 4 1643,839,172,615, 0,1652,2491,2664, +,+,+,+, 805278 LTR ERV1 1175 chrZ 77456570 77463265 Z-REP 892 - 77456570 77463265 0 2 5725,959, 0,5736, -,-, 805285 Satellite macro 1176 chrZ 77464033 77469898 GGLTR7A 779 + 77464033 77469898 0 6 53,3528,332,1558,258,114, 0,64,3592,3933,5492,5751, +,+,+,+,+,+, 805287 LTR ERV1 1176 chrZ 77487417 77487667 CR1-X1 537 + 77487417 77487667 0 2 63,116, 0,134, +,+, 805296 LINE CR1 1176 chrZ 77504804 77512334 Z-REP 361 - 77504804 77512334 0 2 5524,1975, 0,5555, -,-, 805306 Satellite macro 1176 chrZ 77514675 77517191 GGLTR7-int 796 + 77514675 77517191 0 5 277,332,1525,258,113, 0,277,618,2144,2403, +,+,+,+,+, 805313 LTR ERV1 1176 chrZ 77556297 77562198 Z-REP 880 - 77556297 77562198 0 2 1010,4864, 0,1037, -,-, 805334 Satellite macro 1176 chrZ 77563813 77564067 CR1-X2 394 + 77563813 77564067 0 2 62,192, 0,62, +,+, 805337 LINE CR1 1176 chrZ 77583151 77589206 Z-REP 847 - 77583151 77589206 0 2 4256,1739, 0,4316, -,-, 805351 Satellite macro 1176 chrZ 77590807 77591057 CR1-X1 537 + 77590807 77591057 0 2 63,116, 0,134, +,+, 805354 LINE CR1 1177 chrZ 77608261 77615705 Z-REP 866 - 77608261 77615705 0 3 1010,4451,1900, 0,1037,5544, -,-,-, 805365 Satellite macro 1177 chrZ 77634577 77641276 Z-REP 891 - 77634577 77641276 0 2 5729,959, 0,5740, -,-, 805381 Satellite macro 1177 chrZ 77644330 77647912 GGLTR7-int 837 + 77644330 77647912 0 5 1311,332,1557,258,113, 0,1311,1652,3210,3469, +,+,+,+,+, 805385 LTR ERV1 1177 chrZ 77656333 77662734 Z-REP 854 - 77656333 77662734 0 4 1011,924,2460,1900, 0,1050,1985,4501, -,-,-,-, 805392 Satellite macro 1177 chrZ 77691601 77691898 CR1-X2 435 + 77691601 77691898 0 2 63,234, 0,63, +,+, 805416 LINE CR1 1177 chrZ 77706080 77708512 Z-REP 777 - 77706080 77708512 0 2 1521,155, 0,2277, -,-, 805424 Satellite macro 1177 chrZ 77709286 77710489 GGLTR7-int 754 + 77709286 77710489 0 5 53,39,148,70,615, 0,64,366,517,588, +,+,+,+,+, 805427 LTR ERV1 147 chrZ 77725438 77725735 CR1-X2 453 + 77725438 77725735 0 2 63,234, 0,63, +,+, 805435 LINE CR1 1178 chrZ 77741745 77748427 Z-REP 887 - 77741745 77748427 0 3 3728,1951,959, 0,3761,5723, -,-,-, 805442 Satellite macro 1178 chrZ 77749195 77755841 GGLTR7A 778 + 77749195 77755841 0 3 53,5973,609, 0,64,6037, +,+,+, 805445 LTR ERV1 1178 chrZ 77756823 77761340 GGLTR7-int 716 + 77756823 77761340 0 3 53,552,2649, 0,64,1868, +,+,+, 805448 LTR ERV1 1178 chrZ 77761450 77762286 GGLTR7-int 735 + 77761450 77762286 0 3 147,74,614, 0,147,222, +,+,+, 805451 LTR ERV1 1179 chrZ 77907735 77908009 CR1-X2 392 + 77907735 77908009 0 2 63,211, 0,63, +,+, 805508 LINE CR1 1179 chrZ 77926804 77933654 Z-REP 858 - 77926804 77933654 0 2 5504,1294, 0,5556, -,-, 805521 Satellite macro 1179 chrZ 77986126 77986404 CR1-X2 390 + 77986126 77986404 0 2 62,214, 0,64, +,+, 805552 LINE CR1 1180 chrZ 78004582 78011751 Z-REP 882 - 78004582 78011751 0 3 1216,5475,296, 0,1384,6873, -,-,-, 805563 Satellite macro 1180 chrZ 78012520 78016986 GGLTR7-int 760 + 78012520 78016986 0 6 70,1299,332,1531,258,114, 0,921,2220,2561,4093,4352, +,+,+,+,+,+, 805567 LTR ERV1 1180 chrZ 78032165 78032443 CR1-X2 363 + 78032165 78032443 0 2 63,215, 0,63, +,+, 805577 LINE CR1 1180 chrZ 78062037 78062315 CR1-X2 405 + 78062037 78062315 0 2 63,215, 0,63, +,+, 805593 LINE CR1 1180 chrZ 78080633 78087429 Z-REP 829 - 78080633 78087429 0 2 4705,2049, 0,4747, -,-, 805607 Satellite macro 1180 chrZ 78104487 78106919 Z-REP 777 - 78104487 78106919 0 2 1521,155, 0,2277, -,-, 805620 Satellite macro 1180 chrZ 78107693 78111962 GGLTR7-int 759 + 78107693 78111962 0 5 53,39,386,3157,607, 0,64,115,504,3662, +,+,+,+,+, 805623 LTR ERV1 147 chrZ 78118193 78125468 Z-REP 828 - 78118193 78125468 0 2 5514,1713, 0,5562, -,-, 805628 Satellite macro 1181 chrZ 78141070 78146004 Z-REP 910 - 78141070 78146004 0 2 4451,468, 0,4466, -,-, 805640 Satellite macro 1181 chrZ 78146260 78146402 CR1-F0 403 - 78146260 78146402 0 2 41,101, 0,41, -,-, 805642 LINE CR1 1181 chrZ 78149106 78149403 CR1-X2 434 + 78149106 78149403 0 2 63,234, 0,63, +,+, 805644 LINE CR1 1181 chrZ 78168099 78175417 Z-REP 795 - 78168099 78175417 0 3 5369,1604,296, 0,5404,7022, -,-,-, 805655 Satellite macro 1181 chrZ 78175453 78176114 CR1-F2 518 - 78175453 78176114 0 2 383,278, 0,383, -,-, 805657 LINE CR1 1181 chrZ 78178537 78182111 GGLTR7-int 817 + 78178537 78182111 0 5 1303,331,1557,255,114, 0,1303,1643,3201,3460, +,+,+,+,+, 805660 LTR ERV1 1181 chrZ 78189525 78194137 Z-REP 878 - 78189525 78194137 0 2 4464,133, 0,4479, -,-, 805667 Satellite macro 1181 chrZ 78206255 78208687 Z-REP 776 - 78206255 78208687 0 2 1521,155, 0,2277, -,-, 805676 Satellite macro 1181 chrZ 78209461 78213899 GGLTR7A 791 + 78209461 78213899 0 4 53,39,4078,245, 0,64,115,4193, +,+,+,+, 805679 LTR ERV1 1181 chrZ 78213893 78215098 GGLTR7A 828 + 78213893 78215098 0 3 831,259,113, 0,832,1092, +,+,+, 805680 LTR ERV1 1181 chrZ 78221121 78227922 Z-REP 856 - 78221121 78227922 0 2 5442,1307, 0,5494, -,-, 805686 Satellite macro 147 chrZ 78245967 78253264 Z-REP 856 - 78245967 78253264 0 2 5498,1739, 0,5558, -,-, 805699 Satellite macro 1182 chrZ 78272409 78278985 Z-REP 896 - 78272409 78278985 0 2 5606,959, 0,5617, -,-, 805713 Satellite macro 1182 chrZ 78279817 78285116 GGLTR7-int 762 + 78279817 78285116 0 6 68,1846,713,167,251,113, 0,2200,4046,4759,4931,5186, +,+,+,+,+,+, 805716 LTR ERV1 1182 chrZ 78291103 78298801 Z-REP 729 - 78291103 78298801 0 2 5533,2134, 0,5564, -,-, 805721 Satellite macro 1182 chrZ 78298855 78299199 CR1-F2 377 - 78298855 78299199 0 2 202,128, 0,216, -,-, 805723 LINE CR1 1182 chrZ 78316271 78320595 GGLTR7A 813 + 78316271 78320595 0 2 4079,245, 0,4079, +,+, 805736 LTR ERV1 1182 chrZ 78320589 78321794 GGLTR7A 837 + 78320589 78321794 0 3 831,259,113, 0,832,1092, +,+,+, 805737 LTR ERV1 1182 chrZ 78339386 78339641 CR1-X2 552 + 78339386 78339641 0 2 63,121, 0,134, +,+, 805746 LINE CR1 1182 chrZ 78359553 78365454 Z-REP 880 - 78359553 78365454 0 2 1010,4864, 0,1037, -,-, 805757 Satellite macro 1182 chrZ 78367069 78367323 CR1-X2 394 + 78367069 78367323 0 2 62,192, 0,62, +,+, 805760 LINE CR1 1183 chrZ 78459213 78466770 Z-REP 869 - 78459213 78466770 0 2 7159,383, 0,7174, -,-, 805817 Satellite macro 1183 chrZ 78466795 78467139 CR1-F2 440 - 78466795 78467139 0 2 232,112, 0,232, -,-, 805818 LINE CR1 1183 chrZ 78469864 78470142 CR1-X2 374 + 78469864 78470142 0 2 63,215, 0,63, +,+, 805820 LINE CR1 1183 chrZ 78498385 78498695 GGLTR7B 433 + 78498385 78498695 0 2 124,186, 0,124, +,+, 805838 LTR ERV1 1183 chrZ 78498695 78500000 GGLTR11 759 + 78498695 78500000 0 2 557,745, 0,560, +,+, 805839 LTR ERV1 1183 chrZ 78500000 78501554 GGLTR11 659 + 78500000 78501554 0 2 573,55, 0,1499, +,+, 805840 LTR ERV1 1183 chrZ 78503088 78504525 CR1-C 777 + 78503088 78504525 0 2 35,1402, 0,35, +,+, 805843 LINE CR1 1183 chrZ 78508605 78510217 CR1-F2 561 - 78508605 78510217 0 2 725,776, 0,836, -,-, 805849 LINE CR1 1184 chrZ 78546350 78546881 GGLTR5A 370 - 78546350 78546881 0 2 119,291, 0,240, -,-, 805881 LTR ERVL 1184 chrZ 78580488 78582811 GGLTR11-int 356 + 78580488 78582811 0 3 306,489,796, 0,347,1527, +,+,+, 805911 LTR ERV1 1184 chrZ 78581320 78582008 GGLTR7A 737 - 78581320 78582008 0 2 619,69, 0,619, -,-, 805912 LTR ERV1 1184 chrZ 78588477 78588956 CR1-C4 422 - 78588477 78588956 0 2 102,377, 0,102, -,-, 805919 LINE CR1 1184 chrZ 78590814 78593603 CR1-C4 514 + 78590814 78593603 0 2 1344,1445, 0,1344, +,+, 805923 LINE CR1 1185 chrZ 78645088 78646831 GGERVL-B-int 350 - 78645088 78646831 0 2 1414,188, 0,1555, -,-, 805985 LTR ERVL 1185 chrZ 78681045 78681452 CR1-D2 718 + 78681045 78681452 0 2 231,176, 0,231, +,+, 806013 LINE CR1 1185 chrZ 78682975 78687904 CR1-C4 455 + 78682975 78687904 0 3 516,142,38, 0,953,4891, +,+,+, 806016 LINE CR1 1185 chrZ 78683502 78683930 CR1-D2 523 - 78683502 78683930 0 2 214,214, 0,214, -,-, 806017 LINE CR1 1185 chrZ 78695109 78697722 CR1-C4 583 + 78695109 78697722 0 2 2316,293, 0,2320, +,+, 806026 LINE CR1 1185 chrZ 78737005 78738153 CR1-D2 296 - 78737005 78738153 0 2 87,299, 0,849, -,-, 806046 LINE CR1 1185 chrZ 78761330 78761868 CR1-F2 598 - 78761330 78761868 0 2 169,369, 0,169, -,-, 806067 LINE CR1 1185 chrZ 78764718 78765486 CR1-X2 526 - 78764718 78765486 0 2 514,254, 0,514, -,-, 806069 LINE CR1 1185 chrZ 78767648 78767747 (GTTT)n 388 + 78767648 78767747 0 2 10,44, 0,55, +,+, 806070 Simple_repeat Simple_repeat 1186 chrZ 78780855 78781417 CR1-F2 548 - 78780855 78781417 0 3 270,158,134, 0,270,428, -,-,-, 806081 LINE CR1 1186 chrZ 78789763 78791341 CR1-F2 456 + 78789763 78791341 0 2 86,170, 0,1408, +,+, 806090 LINE CR1 1186 chrZ 78789841 78791162 CR1-D2 567 - 78789841 78791162 0 2 835,472, 0,849, -,-, 806091 LINE CR1 1186 chrZ 78832371 78832781 GGLTR5B 303 + 78832371 78832781 0 2 147,178, 0,232, +,+, 806128 LTR ERVL 1186 chrZ 78856778 78857740 GGLTR8B 363 - 78856778 78857740 0 2 348,77, 0,885, -,-, 806146 LTR ERVL 1186 chrZ 78901823 78902552 CR1-C4 476 - 78901823 78902552 0 2 433,164, 0,565, -,-, 806175 LINE CR1 1187 chrZ 78923566 78923978 Char12Mar1_GG 477 - 78923566 78923978 0 2 296,95, 0,317, -,-, 806191 DNA hAT-Charlie 1187 chrZ 78949073 78949469 CR1-H 391 + 78949073 78949469 0 2 145,167, 0,229, +,+, 806200 LINE CR1 1187 chrZ 78970489 78971205 CR1-C4 545 + 78970489 78971205 0 2 146,570, 0,146, +,+, 806210 LINE CR1 1187 chrZ 79000989 79002290 CR1-X 540 + 79000989 79002290 0 2 146,1155, 0,146, +,+, 806229 LINE CR1 1187 chrZ 79021178 79021620 EAVHP_I-int 965 + 79021178 79021620 0 2 311,129, 0,313, +,+, 806244 LTR ERVK 1187 chrZ 79024028 79025429 CR1-C4 474 - 79024028 79025429 0 2 673,680, 0,721, -,-, 806247 LINE CR1 1187 chrZ 79026187 79028266 CR1-E 699 - 79026187 79028266 0 2 1363,716, 0,1363, -,-, 806249 LINE CR1 1187 chrZ 79034554 79034870 GGLTR5A 337 + 79034554 79034870 0 2 90,87, 0,229, +,+, 806255 LTR ERVL 1188 chrZ 79054710 79056321 CR1-Y4 446 - 79054710 79056321 0 2 521,620, 0,991, -,-, 806277 LINE CR1 1188 chrZ 79062879 79065617 CR1-C4 261 - 79062879 79065617 0 2 1367,1371, 0,1367, -,-, 806294 LINE CR1 1188 chrZ 79068983 79069032 (TCTT)n 564 + 79068983 79069032 0 2 8,11, 0,38, +,+, 806296 Simple_repeat Simple_repeat 1188 chrZ 79082998 79083553 CR1-D2 733 - 79082998 79083553 0 2 237,318, 0,237, -,-, 806310 LINE CR1 1188 chrZ 79111246 79112295 CR1-C 793 + 79111246 79112295 0 2 204,770, 0,279, +,+, 806336 LINE CR1 1188 chrZ 79133424 79137398 CR1-D2 606 + 79133424 79137398 0 2 2272,186, 0,3788, +,+, 806356 LINE CR1 1188 chrZ 79147699 79147890 CR1-Y4 407 - 79147699 79147890 0 2 63,128, 0,63, -,-, 806367 LINE CR1 1188 chrZ 79152420 79153413 CR1-D2 548 + 79152420 79153413 0 2 385,607, 0,386, +,+, 806375 LINE CR1 1189 chrZ 79172961 79174911 CR1-D2 565 - 79172961 79174911 0 2 449,1501, 0,449, -,-, 806397 LINE CR1 1189 chrZ 79195338 79198015 CR1-E 526 + 79195338 79198015 0 3 1167,833,231, 0,1167,2446, +,+,+, 806418 LINE CR1 1189 chrZ 79208263 79209726 CR1-C3 653 - 79208263 79209726 0 3 342,210,296, 0,613,1167, -,-,-, 806432 LINE CR1 1189 chrZ 79262660 79266220 CR1-C4 406 + 79262660 79266220 0 3 1367,380,591, 0,2566,2969, +,+,+, 806474 LINE CR1 1189 chrZ 79264031 79265229 CR1-Y2 562 + 79264031 79265229 0 2 1091,107, 0,1091, +,+, 806475 LINE CR1 1189 chrZ 79279626 79280429 CR1-F 790 + 79279626 79280429 0 2 584,219, 0,584, +,+, 806487 LINE CR1 1189 chrZ 79289211 79290392 CR1-C4 557 - 79289211 79290392 0 2 703,478, 0,703, -,-, 806497 LINE CR1 1190 chrZ 79310436 79310557 A-rich 472 + 79310436 79310557 0 2 55,40, 0,81, +,+, 806511 Low_complexity Low_complexity 1190 chrZ 79344235 79344592 Charlie12_GG 441 - 79344235 79344592 0 2 272,85, 0,272, -,-, 806543 DNA hAT-Charlie 1190 chrZ 79367223 79367813 CR1-B 895 + 79367223 79367813 0 2 376,214, 0,376, +,+, 806567 LINE CR1 1190 chrZ 79380626 79382203 CR1-C4 554 + 79380626 79382203 0 3 1247,66,201, 0,1296,1376, +,+,+, 806575 LINE CR1 1190 chrZ 79398293 79398382 (TGTTTG)n 364 + 79398293 79398382 0 2 25,9, 0,80, +,+, 806591 Simple_repeat Simple_repeat 1191 chrZ 79454231 79456567 CR1-C 842 - 79454231 79456567 0 2 515,412, 0,1924, -,-, 806623 LINE CR1 1191 chrZ 79470314 79470592 GGLTR5B 510 - 79470314 79470592 0 2 121,146, 0,132, -,-, 806633 LTR ERVL 1191 chrZ 79483925 79485215 CR1-Y1_Aves 465 + 79483925 79485215 0 2 845,48, 0,1242, +,+, 806646 LINE CR1 1191 chrZ 79490865 79492211 CR1-F2 609 + 79490865 79492211 0 2 1088,258, 0,1088, +,+, 806652 LINE CR1 1191 chrZ 79496359 79497940 CR1-B2 747 + 79496359 79497940 0 2 616,965, 0,616, +,+, 806654 LINE CR1 1191 chrZ 79537441 79544976 Char12Mar1_GG 476 - 79537441 79544976 0 2 573,616, 0,6919, -,-, 806682 DNA hAT-Charlie 148 chrZ 79558280 79560981 CR1-Y 391 + 79558280 79560981 0 3 92,156,1555, 0,826,1146, +,+,+, 806703 LINE CR1 1192 chrZ 79615287 79616276 CR1-C4 586 - 79615287 79616276 0 2 173,74, 0,915, -,-, 806767 LINE CR1 1192 chrZ 79649486 79649706 GGLTR5B 610 - 79649486 79649706 0 2 137,82, 0,138, -,-, 806793 LTR ERVL 1192 chrZ 79650055 79652561 GGERVL-B-int 395 - 79650055 79652561 0 2 701,1801, 0,705, -,-, 806794 LTR ERVL 1192 chrZ 79653574 79654390 GGLTR5B 449 - 79653574 79654390 0 2 163,369, 0,447, -,-, 806796 LTR ERVL 1192 chrZ 79668750 79669856 CR1-D2 535 - 79668750 79669856 0 2 248,330, 0,776, -,-, 806805 LINE CR1 1193 chrZ 79730462 79731441 CR1-Y1_Aves 161 + 79730462 79731441 0 2 234,142, 0,837, +,+, 806838 LINE CR1 1193 chrZ 79735385 79737003 CR1-E 408 - 79735385 79737003 0 2 740,876, 0,742, -,-, 806843 LINE CR1 1193 chrZ 79800634 79801836 CR1-D2 544 + 79800634 79801836 0 2 129,539, 0,663, +,+, 806903 LINE CR1 1193 chrZ 79821546 79822205 CR1-Y2_Aves 146 - 79821546 79822205 0 2 274,351, 0,308, -,-, 806919 LINE CR1 1194 chrZ 79827289 79828207 CR1-C 864 - 79827289 79828207 0 2 190,728, 0,190, -,-, 806922 LINE CR1 1194 chrZ 79832623 79834397 CR1-X 196 - 79832623 79834397 0 2 1383,210, 0,1564, -,-, 806928 LINE CR1 1194 chrZ 79871509 79873914 CR1-C4 455 + 79871509 79873914 0 3 218,187,187, 0,226,2218, +,+,+, 806962 LINE CR1 1194 chrZ 79903428 79905007 Mariner1_GG 534 - 79903428 79905007 0 2 586,500, 0,1079, -,-, 806986 DNA TcMar-Mariner 1194 chrZ 79925378 79926093 CR1-D2 703 - 79925378 79926093 0 2 247,159, 0,556, -,-, 806994 LINE CR1 1194 chrZ 79947828 79948608 CR1-C4 599 - 79947828 79948608 0 2 187,279, 0,501, -,-, 807012 LINE CR1 1195 chrZ 79968822 79969615 CR1-C3 686 + 79968822 79969615 0 2 265,528, 0,265, +,+, 807026 LINE CR1 1195 chrZ 79994210 79995685 CR1-C 852 + 79994210 79995685 0 2 805,670, 0,805, +,+, 807047 LINE CR1 1195 chrZ 80008131 80008178 (TTGG)n 432 + 80008131 80008178 0 2 16,12, 0,35, +,+, 807058 Simple_repeat Simple_repeat 1195 chrZ 80019632 80021459 CR1-Y1_Aves 243 + 80019632 80021459 0 2 23,767, 0,1060, +,+, 807064 LINE CR1 1195 chrZ 80019655 80020420 CR1-Y 480 + 80019655 80020420 0 2 214,549, 0,216, +,+, 807065 LINE CR1 1195 chrZ 80032992 80033333 CR1-C4 561 - 80032992 80033333 0 2 166,175, 0,166, -,-, 807075 LINE CR1 1195 chrZ 80052796 80054592 CR1-C4 551 - 80052796 80054592 0 2 677,1119, 0,677, -,-, 807094 LINE CR1 1195 chrZ 80056516 80056927 CR1-C3 644 + 80056516 80056927 0 2 94,314, 0,97, +,+, 807098 LINE CR1 1195 chrZ 80058111 80058435 CR1-Y4 659 + 80058111 80058435 0 2 120,169, 0,155, +,+, 807099 LINE CR1 1195 chrZ 80082798 80083252 CR1-C3 714 - 80082798 80083252 0 2 137,197, 0,257, -,-, 807129 LINE CR1 149 chrZ 80084880 80089342 CR1-F 623 + 80084880 80089342 0 2 62,1383, 0,3079, +,+, 807133 LINE CR1 1196 chrZ 80122688 80123566 ENS1-int 593 - 80122688 80123566 0 2 813,65, 0,813, -,-, 807158 LTR ERVL 1196 chrZ 80123820 80130721 Z-REP 871 + 80123820 80130721 0 2 1360,5485, 0,1416, +,+, 807160 Satellite macro 1196 chrZ 80149626 80155719 Z-REP 860 + 80149626 80155719 0 2 1993,4044, 0,2049, +,+, 807178 Satellite macro 1196 chrZ 80161214 80161364 G-rich 616 + 80161214 80161364 0 2 37,59, 0,91, +,+, 807184 Low_complexity Low_complexity 1196 chrZ 80165664 80169634 GGLTR7-int 792 - 80165664 80169634 0 6 113,258,1552,336,136,68, 0,114,377,1938,2274,3902, -,-,-,-,-,-, 807187 LTR ERV1 1196 chrZ 80170678 80175032 GGLTR7A 842 - 80170678 80175032 0 2 609,3745, 0,609, -,-, 807192 LTR ERV1 1196 chrZ 80176980 80185102 Z-REP 755 + 80176980 80185102 0 3 155,1976,5208, 0,911,2914, +,+,+, 807196 Satellite macro 1196 chrZ 80204204 80211307 Z-REP 845 + 80204204 80211307 0 2 1738,5313, 0,1790, +,+, 807215 Satellite macro 1197 chrZ 80217530 80221520 GGLTR7-int 797 - 80217530 80221520 0 7 112,254,899,444,2160,39,53, 0,115,370,1271,1715,3887,3937, -,-,-,-,-,-,-, 807220 LTR ERV1 1197 chrZ 80240009 80246793 Z-REP 830 + 80240009 80246793 0 2 2066,4675, 0,2109, +,+, 807232 Satellite macro 1197 chrZ 80250716 80250847 G-rich 654 + 80250716 80250847 0 2 37,41, 0,90, +,+, 807236 Low_complexity Low_complexity 1197 chrZ 80252826 80256409 GGLTR7-int 817 - 80252826 80256409 0 5 114,258,1557,336,1307, 0,115,374,1940,2276, -,-,-,-,-, 807238 LTR ERV1 1197 chrZ 80259463 80267008 Z-REP 893 + 80259463 80267008 0 3 296,1662,5521, 0,310,2024, +,+,+, 807242 Satellite macro 1197 chrZ 80273467 80276646 GGLTR7-int 763 - 80273467 80276646 0 5 614,172,725,358,1309, 0,615,787,1512,1870, -,-,-,-,-, 807247 LTR ERV1 1197 chrZ 80292634 80298573 GGLTR7A 785 - 80292634 80298573 0 6 114,258,1557,336,3599,53, 0,115,374,1940,2276,5886, -,-,-,-,-,-, 807254 LTR ERV1 1197 chrZ 80299341 80304768 Z-REP 904 + 80299341 80304768 0 2 959,4457, 0,970, +,+, 807256 Satellite macro 1197 chrZ 80310101 80310232 G-rich 654 + 80310101 80310232 0 2 37,41, 0,90, +,+, 807260 Low_complexity Low_complexity 1197 chrZ 80316070 80323670 Z-REP 389 + 80316070 80323670 0 2 2083,5490, 0,2110, +,+, 807268 Satellite macro 1197 chrZ 80341243 80341524 CR1-X2 451 - 80341243 80341524 0 2 218,63, 0,218, -,-, 807280 LINE CR1 1197 chrZ 80344255 80344599 CR1-F2 404 + 80344255 80344599 0 2 128,216, 0,128, +,+, 807282 LINE CR1 149 chrZ 80344624 80351434 Z-REP 850 + 80344624 80351434 0 3 875,192,5700, 0,886,1110, +,+,+, 807283 Satellite macro 1198 chrZ 80367476 80367750 CR1-X2 351 - 80367476 80367750 0 2 211,63, 0,211, -,-, 807294 LINE CR1 1198 chrZ 80369350 80376534 Z-REP 833 + 80369350 80376534 0 2 1738,5394, 0,1790, +,+, 807296 Satellite macro 1198 chrZ 80380691 80380838 G-rich 607 + 80380691 80380838 0 2 37,57, 0,90, +,+, 807300 Low_complexity Low_complexity 1198 chrZ 80382795 80387190 GGLTR7-int 783 - 80382795 80387190 0 6 113,258,1557,338,136,68, 0,114,373,1939,2277,4327, -,-,-,-,-,-, 807302 LTR ERV1 1198 chrZ 80388000 80394671 Z-REP 899 + 80388000 80394671 0 2 959,5701, 0,970, +,+, 807306 Satellite macro 1198 chrZ 80417358 80423507 Z-REP 892 + 80417358 80423507 0 2 1908,4213, 0,1936, +,+, 807324 Satellite macro 1198 chrZ 80440540 80440811 CR1-X1 503 - 80440540 80440811 0 2 16,63, 0,208, -,-, 807337 LINE CR1 1198 chrZ 80442414 80449656 Z-REP 852 + 80442414 80449656 0 2 1742,5444, 0,1798, +,+, 807340 Satellite macro 1198 chrZ 80453846 80453996 G-rich 599 + 80453846 80453996 0 2 38,59, 0,91, +,+, 807344 Low_complexity Low_complexity 1198 chrZ 80458310 80459721 GGLTR7-int 772 - 80458310 80459721 0 3 611,172,627, 0,612,784, -,-,-, 807347 LTR ERV1 149 chrZ 80473448 80480260 Z-REP 854 + 80473448 80480260 0 2 1307,5453, 0,1359, +,+, 807358 Satellite macro 1199 chrZ 80486338 80488255 GGLTR7A 830 - 80486338 80488255 0 3 113,258,1544, 0,114,373, -,-,-, 807364 LTR ERV1 1199 chrZ 80488896 80495545 Z-REP 890 + 80488896 80495545 0 2 959,5679, 0,970, +,+, 807366 Satellite macro 1199 chrZ 80500731 80500778 (TTT)n 374 + 80500731 80500778 0 2 14,7, 0,40, +,+, 807369 Simple_repeat Simple_repeat 1199 chrZ 80524924 80525073 G-rich 519 + 80524924 80525073 0 2 38,59, 0,90, +,+, 807384 Low_complexity Low_complexity 1199 chrZ 80529380 80532016 GGLTR7-int 639 - 80529380 80532016 0 4 614,74,1397,68, 0,616,690,2568, -,-,-,-, 807387 LTR ERV1 1199 chrZ 80532843 80539463 Z-REP 859 + 80532843 80539463 0 3 296,608,5691, 0,310,929, +,+,+, 807391 Satellite macro 1199 chrZ 80543384 80543534 G-rich 573 + 80543384 80543534 0 2 38,60, 0,90, +,+, 807394 Low_complexity Low_complexity 1199 chrZ 80545495 80549973 GGLTR7-int 755 - 80545495 80549973 0 6 114,255,1531,336,2041,68, 0,118,374,1914,2250,4410, -,-,-,-,-,-, 807396 LTR ERV1 1199 chrZ 80550811 80553243 Z-REP 775 + 80550811 80553243 0 2 155,1521, 0,911, +,+, 807400 Satellite macro 1199 chrZ 80582225 80582385 G-rich 586 + 80582225 80582385 0 2 38,70, 0,90, +,+, 807415 Low_complexity Low_complexity 1199 chrZ 80584324 80585164 GGLTR7-int 727 - 80584324 80585164 0 3 618,75,146, 0,619,694, -,-,-, 807417 LTR ERV1 1199 chrZ 80591040 80597832 Z-REP 862 + 80591040 80597832 0 2 959,5822, 0,970, +,+, 807422 Satellite macro 1200 chrZ 80611629 80618947 Z-REP 856 + 80611629 80618947 0 2 1745,5517, 0,1801, +,+, 807434 Satellite macro 1200 chrZ 80628109 80635353 Z-REP 795 + 80628109 80635353 0 2 2061,5156, 0,2088, +,+, 807444 Satellite macro 1200 chrZ 80669616 80673431 GGLTR7-int 738 - 80669616 80673431 0 2 767,3048, 0,767, -,-, 807464 LTR ERV1 1200 chrZ 80674250 80680948 Z-REP 894 + 80674250 80680948 0 2 959,5728, 0,970, +,+, 807467 Satellite macro 1200 chrZ 80697971 80698268 CR1-X2 455 - 80697971 80698268 0 2 226,62, 0,235, -,-, 807479 LINE CR1 1200 chrZ 80700995 80701339 CR1-F2 342 + 80700995 80701339 0 2 45,232, 0,112, +,+, 807482 LINE CR1 1200 chrZ 80701393 80708181 Z-REP 864 + 80701393 80708181 0 4 297,606,4475,1217, 0,311,928,5571, +,+,+,+, 807484 Satellite macro 1200 chrZ 80712085 80712235 G-rich 616 + 80712085 80712235 0 2 37,59, 0,91, +,+, 807488 Low_complexity Low_complexity 1200 chrZ 80716535 80720505 GGLTR7-int 794 - 80716535 80720505 0 6 113,258,1552,336,136,68, 0,114,377,1938,2274,3902, -,-,-,-,-,-, 807491 LTR ERV1 1200 chrZ 80721549 80725903 GGLTR7A 840 - 80721549 80725903 0 2 609,3745, 0,609, -,-, 807496 LTR ERV1 1200 chrZ 80727847 80734488 Z-REP 895 + 80727847 80734488 0 2 959,5671, 0,970, +,+, 807500 Satellite macro 1200 chrZ 80738425 80738565 G-rich 597 + 80738425 80738565 0 2 37,50, 0,90, +,+, 807503 Low_complexity Low_complexity 1201 chrZ 80755834 80763125 Z-REP 858 + 80755834 80763125 0 2 1742,5493, 0,1798, +,+, 807519 Satellite macro 1201 chrZ 80767306 80767455 G-rich 573 + 80767306 80767455 0 2 37,59, 0,90, +,+, 807524 Low_complexity Low_complexity 1201 chrZ 80769416 80775373 GGLTR7A 789 - 80769416 80775373 0 6 114,258,1556,335,3619,53, 0,115,374,1939,2274,5904, -,-,-,-,-,-, 807526 LTR ERV1 1201 chrZ 80804116 80804263 G-rich 586 + 80804116 80804263 0 2 37,57, 0,90, +,+, 807543 Low_complexity Low_complexity 1201 chrZ 80806156 80810425 GGLTR7-int 767 - 80806156 80810425 0 5 607,3157,386,39,53, 0,608,3768,4166,4216, -,-,-,-,-, 807545 LTR ERV1 1201 chrZ 80811199 80819467 Z-REP 785 + 80811199 80819467 0 2 155,7357, 0,911, +,+, 807547 Satellite macro 1201 chrZ 80823452 80823583 G-rich 660 + 80823452 80823583 0 2 38,41, 0,90, +,+, 807550 Low_complexity Low_complexity 1201 chrZ 80827915 80829232 GGLTR7-int 782 - 80827915 80829232 0 6 105,267,298,164,336,136, 0,105,374,672,845,1181, -,-,-,-,-,-, 807553 LTR ERV1 1201 chrZ 80830937 80833369 Z-REP 778 + 80830937 80833369 0 2 155,1521, 0,911, +,+, 807557 Satellite macro 1201 chrZ 80846810 80847084 CR1-X2 491 - 80846810 80847084 0 2 211,63, 0,211, -,-, 807566 LINE CR1 1201 chrZ 80849286 80855158 Z-REP 877 + 80849286 80855158 0 2 1584,4236, 0,1636, +,+, 807569 Satellite macro 1201 chrZ 80860636 80860783 G-rich 633 + 80860636 80860783 0 2 38,56, 0,91, +,+, 807575 Low_complexity Low_complexity 1201 chrZ 80865085 80869058 GGLTR7-int 787 - 80865085 80869058 0 6 113,258,1550,336,136,68, 0,114,377,1936,2272,3905, -,-,-,-,-,-, 807578 LTR ERV1 150 chrZ 80869892 80878155 Z-REP 789 + 80869892 80878155 0 2 155,7352, 0,911, +,+, 807582 Satellite macro 1202 chrZ 80896162 80896459 CR1-X2 416 - 80896162 80896459 0 2 241,56, 0,241, -,-, 807594 LINE CR1 1202 chrZ 80899550 80905150 Z-REP 880 + 80899550 80905150 0 2 1075,4514, 0,1086, +,+, 807598 Satellite macro 1202 chrZ 80910315 80910462 G-rich 603 + 80910315 80910462 0 2 38,50, 0,97, +,+, 807602 Low_complexity Low_complexity 1202 chrZ 80913092 80915153 GGLTR7-int 501 + 80913092 80915153 0 3 115,465,63, 0,1390,1998, +,+,+, 807606 LTR ERV1 1202 chrZ 80930429 80931000 CR1-C4 410 - 80930429 80931000 0 2 76,433, 0,138, -,-, 807616 LINE CR1 1202 chrZ 80938307 80941122 CR1-X2 562 - 80938307 80941122 0 2 148,345, 0,2470, -,-, 807625 LINE CR1 1203 chrZ 81006281 81006811 GGLTR8B 172 + 81006281 81006811 0 2 161,369, 0,161, +,+, 807672 LTR ERVL 1203 chrZ 81019253 81019655 GGLTR8A 501 + 81019253 81019655 0 2 159,238, 0,164, +,+, 807681 LTR ERVL 1203 chrZ 81065509 81067138 CR1-X 425 + 81065509 81067138 0 3 202,513,603, 0,513,1026, +,+,+, 807703 LINE CR1 1203 chrZ 81065709 81066022 CR1-E 798 - 81065709 81066022 0 2 119,194, 0,119, -,-, 807704 LINE CR1 1203 chrZ 81073921 81074386 CR1-F2 490 + 81073921 81074386 0 2 117,348, 0,117, +,+, 807709 LINE CR1 1203 chrZ 81096047 81097252 CR1-Y2_Aves 323 - 81096047 81097252 0 2 719,454, 0,751, -,-, 807727 LINE CR1 1203 chrZ 81097329 81097728 Char12Mar1_GG 619 - 81097329 81097728 0 2 272,127, 0,272, -,-, 807729 DNA hAT-Charlie 1203 chrZ 81119656 81120068 CR1-Y2_Aves 478 - 81119656 81120068 0 3 153,47,78, 0,265,334, -,-,-, 807744 LINE CR1 1204 chrZ 81158999 81159369 CR1-Y4 656 - 81158999 81159369 0 2 158,212, 0,158, -,-, 807758 LINE CR1 1204 chrZ 81199744 81200511 CR1-E 478 + 81199744 81200511 0 2 285,300, 0,467, +,+, 807787 LINE CR1 1204 chrZ 81202228 81207376 CR1-C4 459 - 81202228 81207376 0 3 56,863,179, 0,56,4969, -,-,-, 807790 LINE CR1 1204 chrZ 81219908 81220516 CR1-Y3 680 - 81219908 81220516 0 2 570,38, 0,570, -,-, 807800 LINE CR1 1204 chrZ 81220556 81221592 CR1-Y4 407 + 81220556 81221592 0 2 931,105, 0,931, +,+, 807801 LINE CR1 1204 chrZ 81255473 81258057 CR1-X2 438 + 81255473 81258057 0 3 218,360,107, 0,1562,2477, +,+,+, 807823 LINE CR1 1205 chrZ 81282887 81283215 CR1-D2 595 - 81282887 81283215 0 2 238,90, 0,238, -,-, 807842 LINE CR1 1205 chrZ 81322082 81322948 CR1-D2 553 - 81322082 81322948 0 2 552,307, 0,559, -,-, 807868 LINE CR1 1205 chrZ 81367557 81369332 CR1-C3 620 - 81367557 81369332 0 2 1569,164, 0,1611, -,-, 807895 LINE CR1 1206 chrZ 81415241 81415624 Char12Mar1_GG 679 - 81415241 81415624 0 2 276,106, 0,277, -,-, 807931 DNA hAT-Charlie 1206 chrZ 81468510 81469246 CR1-D 659 + 81468510 81469246 0 2 386,340, 0,396, +,+, 807967 LINE CR1 1206 chrZ 81506381 81508128 CR1-C4 593 - 81506381 81508128 0 4 271,407,281,255, 0,275,1209,1492, -,-,-,-, 807986 LINE CR1 1207 chrZ 81531974 81533512 CR1-C4 378 - 81531974 81533512 0 2 351,981, 0,557, -,-, 807996 LINE CR1 1207 chrZ 81553296 81554028 CR1-Y1_Aves 281 + 81553296 81554028 0 2 612,120, 0,612, +,+, 808013 LINE CR1 1208 chrZ 81699843 81700302 TguLTR5e 286 + 81699843 81700302 0 2 287,152, 0,307, +,+, 808093 LTR ERVL 1209 chrZ 81910266 81911615 CR1-D2 264 - 81910266 81911615 0 2 1016,292, 0,1057, -,-, 808239 LINE CR1 1210 chrZ 81921280 81922467 CR1-E 733 - 81921280 81922467 0 3 150,451,584, 0,150,603, -,-,-, 808254 LINE CR1 1210 chrZ 81930171 81931503 CR1-Y 493 + 81930171 81931503 0 2 518,789, 0,543, +,+, 808259 LINE CR1 1210 chrZ 81937958 81939789 CR1-Y1_Aves 171 - 81937958 81939789 0 3 310,898,381, 0,310,1450, -,-,-, 808266 LINE CR1 1210 chrZ 81959529 81960407 GGERVL-B-int 151 - 81959529 81960407 0 2 323,243, 0,635, -,-, 808285 LTR ERVL 1210 chrZ 81961041 81961632 GGLTR5B 681 - 81961041 81961632 0 2 495,45, 0,546, -,-, 808286 LTR ERVL 1210 chrZ 81969925 81971337 CR1-C3 539 + 81969925 81971337 0 2 255,79, 0,1333, +,+, 808296 LINE CR1 1210 chrZ 81973152 81974286 CR1-F 649 + 81973152 81974286 0 2 139,995, 0,139, +,+, 808304 LINE CR1 1210 chrZ 82000320 82000837 Z-REP 218 - 82000320 82000837 0 2 18,175, 0,342, -,-, 808319 Satellite macro 1210 chrZ 82010955 82019755 Z-REP 772 - 82010955 82019755 0 2 7895,155, 0,8645, -,-, 808321 Satellite macro 1210 chrZ 82027554 82036354 Z-REP 773 - 82027554 82036354 0 2 7895,155, 0,8645, -,-, 808325 Satellite macro 1211 chrZ 82087285 82089511 Z-REP 791 - 82087285 82089511 0 2 1321,155, 0,2071, -,-, 808328 Satellite macro 1211 chrZ 82107496 82110703 GGLTR7-int 807 + 82107496 82110703 0 3 2303,293,610, 0,2303,2597, +,+,+, 808335 LTR ERV1 1211 chrZ 82127647 82130854 GGLTR7-int 807 + 82127647 82130854 0 3 2303,293,610, 0,2303,2597, +,+,+, 808341 LTR ERV1 1211 chrZ 82147806 82151013 GGLTR7-int 807 + 82147806 82151013 0 3 2303,293,610, 0,2303,2597, +,+,+, 808347 LTR ERV1 1211 chrZ 82157785 82166600 Z-REP 762 - 82157785 82166600 0 2 7910,155, 0,8660, -,-, 808351 Satellite macro 1212 chrZ 82183414 82186624 GGLTR7-int 817 + 82183414 82186624 0 3 2303,293,613, 0,2303,2597, +,+,+, 808357 LTR ERV1 1212 chrZ 82193333 82202122 Z-REP 775 - 82193333 82202122 0 2 7885,154, 0,8635, -,-, 808362 Satellite macro 1212 chrZ 82209928 82218729 Z-REP 798 - 82209928 82218729 0 2 7896,155, 0,8646, -,-, 808367 Satellite macro 1212 chrZ 82236759 82239963 GGLTR7-int 808 + 82236759 82239963 0 3 2300,293,610, 0,2300,2594, +,+,+, 808373 LTR ERV1 1212 chrZ 82257096 82260306 GGLTR7-int 815 + 82257096 82260306 0 3 2303,293,613, 0,2303,2597, +,+,+, 808377 LTR ERV1 1212 chrZ 82267142 82275937 Z-REP 682 - 82267142 82275937 0 2 7890,155, 0,8640, -,-, 808382 Satellite macro 1212 chrZ 82283734 82292534 Z-REP 774 - 82283734 82292534 0 2 7895,155, 0,8645, -,-, 808386 Satellite macro 1212 chrZ 82300320 82309236 Z-REP 781 - 82300320 82309236 0 3 5845,2085,155, 0,5926,8761, -,-,-, 808390 Satellite macro 585 chrZ_NT_463578v1_random 68908 70823 GGERVL-C-int 305 - 68908 70823 0 3 530,353,1032, 0,530,883, -,-,-, 808451 LTR ERVL 585 chrZ_NT_463578v1_random 79347 80674 CR1-D 698 + 79347 80674 0 2 316,1001, 0,326, +,+, 808463 LINE CR1 585 chrZ_NT_463578v1_random 90512 92239 CR1-C4 401 - 90512 92239 0 3 221,77,501, 0,1095,1226, -,-,-, 808471 LINE CR1 586 chrZ_NT_463578v1_random 249397 249480 A-rich 672 + 249397 249480 0 2 37,29, 0,54, +,+, 808483 Low_complexity Low_complexity 587 chrZ_NT_463578v1_random 266054 267717 CR1-Y2_Aves 313 + 266054 267717 0 2 620,337, 0,1326, +,+, 808503 LINE CR1 587 chrZ_NT_463578v1_random 366193 369088 CR1-X1 335 + 366193 369088 0 2 118,739, 0,2156, +,+, 808558 LINE CR1 587 chrZ_NT_463578v1_random 376849 378276 CR1-C4 541 + 376849 378276 0 2 439,970, 0,457, +,+, 808568 LINE CR1 588 chrZ_NT_463578v1_random 434398 435567 CR1-X2 591 - 434398 435567 0 2 481,688, 0,481, -,-, 808601 LINE CR1 588 chrZ_NT_463578v1_random 459522 460535 CR1-C4 678 - 459522 460535 0 3 109,570,331, 0,111,682, -,-,-, 808610 LINE CR1 588 chrZ_NT_463578v1_random 470354 470459 (CTT)n 160 + 470354 470459 0 2 11,65, 0,40, +,+, 808615 Simple_repeat Simple_repeat 585 chrZ_NT_463579v1_random 19121 19465 CR1-L3B_Croc 220 - 19121 19465 0 2 184,134, 0,210, -,-, 808644 LINE CR1 585 chrZ_NT_463579v1_random 24003 24165 CR1-Y2 448 - 24003 24165 0 2 12,150, 0,12, -,-, 808650 LINE CR1 585 chrZ_NT_463579v1_random 40323 40423 (TA)n 646 + 40323 40423 0 2 17,39, 0,61, +,+, 808664 Simple_repeat Simple_repeat 585 chrZ_NT_463579v1_random 84205 84562 CR1-F2 509 - 84205 84562 0 2 190,167, 0,190, -,-, 808690 LINE CR1 585 chrZ_NT_463579v1_random 89747 91114 CR1-Y4 550 + 89747 91114 0 2 44,1030, 0,337, +,+, 808694 LINE CR1 586 chrZ_NT_463579v1_random 181718 181804 A-rich 426 + 181718 181804 0 2 14,47, 0,39, +,+, 808740 Low_complexity Low_complexity 585 chrZ_NT_463580v1_random 14043 19597 GGERVL-B-int 809 - 14043 19597 0 2 5075,477, 0,5077, -,-, 808794 LTR ERVL 585 chrZ_NT_463580v1_random 28291 28653 GGERVL18-LTR 680 + 28291 28653 0 2 239,96, 0,266, +,+, 808800 LTR ERVL 585 chrZ_NT_463580v1_random 36529 37456 CR1-C4 356 - 36529 37456 0 2 247,655, 0,272, -,-, 808808 LINE CR1 585 chrZ_NT_463580v1_random 40467 40837 GGLTR12C 643 - 40467 40837 0 2 295,51, 0,319, -,-, 808814 LTR ERVL 585 chrZ_NT_463580v1_random 52884 53476 GGLTR3C2 579 + 52884 53476 0 2 200,185, 0,407, +,+, 808835 LTR ERVL 585 chrZ_NT_463580v1_random 53691 59278 GGERVL18-int 788 - 53691 59278 0 4 343,1215,3450,202, 0,343,1927,5385, -,-,-,-, 808838 LTR ERVL 585 chrZ_NT_463580v1_random 70619 72551 CR1-Y2 674 + 70619 72551 0 2 726,711, 0,1221, +,+, 808857 LINE CR1 585 chrZ_NT_463580v1_random 86950 88134 Char12Mar1_GG 480 - 86950 88134 0 2 209,424, 0,760, -,-, 808877 DNA hAT-Charlie 585 chrZ_NT_463580v1_random 93809 94440 GGLTR5A 375 - 93809 94440 0 2 110,402, 0,229, -,-, 808884 LTR ERVL 585 chrZ_NT_463580v1_random 97556 98320 GGLTR5B 401 + 97556 98320 0 2 86,69, 0,695, +,+, 808891 LTR ERVL 585 chrZ_NT_463580v1_random 99908 101016 GGERVL-B-int 300 + 99908 101016 0 2 124,660, 0,448, +,+, 808899 LTR ERVL 585 chrZ_NT_463580v1_random 101016 101625 GGLTR5A 132 + 101016 101625 0 2 440,141, 0,468, +,+, 808901 LTR ERVL 585 chrZ_NT_463580v1_random 109307 110779 CR1-E 341 + 109307 110779 0 3 484,891,77, 0,495,1395, +,+,+, 808908 LINE CR1 585 chrZ_NT_463580v1_random 110791 112795 GGLTR3C2 593 + 110791 112795 0 3 372,106,93, 0,956,1911, +,+,+, 808909 LTR ERVL 585 chrZ_NT_463580v1_random 111853 112702 GGLTR12B 526 - 111853 112702 0 2 215,634, 0,215, -,-, 808911 LTR ERVL 585 chrZ_NT_463580v1_random 116873 116998 (TAATA)n 338 + 116873 116998 0 2 49,11, 0,114, +,+, 808917 Simple_repeat Simple_repeat 585 chrZ_NT_463580v1_random 118283 120638 GGLTR3D 613 - 118283 120638 0 2 64,588, 0,1767, -,-, 808920 LTR ERVL 585 chrZ_NT_463580v1_random 122696 125537 CR1-C4 587 - 122696 125537 0 2 1150,808, 0,2033, -,-, 808925 LINE CR1 585 chrZ_NT_463580v1_random 130409 130863 CR1-Y1_Aves 250 + 130409 130863 0 2 289,165, 0,289, +,+, 808934 LINE CR1 586 chrZ_NT_463580v1_random 136716 137212 GGLTR3F2 674 + 136716 137212 0 2 230,213, 0,283, +,+, 808940 LTR ERVL 586 chrZ_NT_463580v1_random 146757 148826 CR1-C 832 + 146757 148826 0 2 1208,861, 0,1208, +,+, 808957 LINE CR1 586 chrZ_NT_463580v1_random 152095 153004 GGLTR12B 751 - 152095 153004 0 2 243,666, 0,243, -,-, 808961 LTR ERVL 586 chrZ_NT_463580v1_random 155950 156043 (TTG)n 308 + 155950 156043 0 2 49,15, 0,78, +,+, 808965 Simple_repeat Simple_repeat 586 chrZ_NT_463580v1_random 164152 164504 GGLTR5B 381 + 164152 164504 0 2 134,115, 0,237, +,+, 808978 LTR ERVL 585 chrZ_NT_463582v1_random 3652 4081 (CACTC)n 372 + 3652 4081 0 2 175,193, 0,236, +,+, 809005 Simple_repeat Simple_repeat 585 chrZ_NT_463582v1_random 6055 7482 GGLTR3E3 674 - 6055 7482 0 2 897,530, 0,897, -,-, 809010 LTR ERVL 585 chrZ_NT_463582v1_random 8066 9881 CR1-B 604 - 8066 9881 0 2 271,723, 0,1092, -,-, 809012 LINE CR1 585 chrZ_NT_463582v1_random 8322 9158 GGLTR3A 857 - 8322 9158 0 2 310,526, 0,310, -,-, 809013 LTR ERVL 585 chrZ_NT_463582v1_random 10887 11040 GGERVL-B-int 810 - 10887 11040 0 2 41,110, 0,43, -,-, 809016 LTR ERVL 585 chrZ_NT_463582v1_random 11786 13213 GGLTR3E3 674 + 11786 13213 0 2 530,897, 0,530, +,+, 809019 LTR ERVL 585 chrZ_NT_463582v1_random 15187 15616 (GAGTG)n 372 + 15187 15616 0 2 193,175, 0,254, +,+, 809024 Simple_repeat Simple_repeat 585 chrZ_NT_463582v1_random 18168 18777 (GAGTG)n 390 + 18168 18777 0 3 180,200,171, 0,222,438, +,+,+, 809037 Simple_repeat Simple_repeat 585 chrZ_NT_463582v1_random 19265 19990 (GAGTG)n 292 + 19265 19990 0 2 249,446, 0,279, +,+, 809040 Simple_repeat Simple_repeat 585 chrZ_NT_463582v1_random 21527 25234 GGLTR7A 849 + 21527 25234 0 2 609,3098, 0,609, +,+, 809049 LTR ERV1 585 chrZ_NT_463582v1_random 25234 29004 GGERVL-A-int 860 - 25234 29004 0 3 527,45,3156, 0,527,614, -,-,-, 809050 LTR ERVL 585 chrZ_NT_463582v1_random 29004 31082 GGLTR3A 753 + 29004 31082 0 2 527,1551, 0,527, +,+, 809051 LTR ERVL 585 chrZ_NT_463583v1_random 73424 74560 CR1-D2 604 - 73424 74560 0 2 52,970, 0,166, -,-, 809107 LINE CR1 586 chrZ_NT_463583v1_random 132495 134659 ENS1-int 701 + 132495 134659 0 2 956,1201, 0,963, +,+, 809164 LTR ERVL 585 chrZ_NT_463584v1_random 15667 17128 CR1-Y2_Aves 258 - 15667 17128 0 3 148,163,221, 0,1075,1240, -,-,-, 809184 LINE CR1 585 chrZ_NT_463584v1_random 26171 29958 CR1-Y2_Aves 203 + 26171 29958 0 2 651,455, 0,3332, +,+, 809196 LINE CR1 585 chrZ_NT_463585v1_random 13490 13987 CR1-L3B_Croc 196 - 13490 13987 0 2 99,271, 0,226, -,-, 809261 LINE CR1 585 chrZ_NT_463586v1_random 2330 3723 GGLTR7-int 312 - 2330 3723 0 3 289,236,100, 0,1031,1293, -,-,-, 809279 LTR ERV1 585 chrZ_NT_463586v1_random 4459 7176 GGERVL-B-int 796 - 4459 7176 0 4 918,1063,53,312, 0,918,1981,2405, -,-,-,-, 809282 LTR ERVL 585 chrZ_NT_463586v1_random 9432 10228 GGLTR7A 795 - 9432 10228 0 2 573,214, 0,582, -,-, 809286 LTR ERV1 585 chrZ_NT_463586v1_random 34778 40726 Char12Mar1_GG 552 - 34778 40726 0 2 769,78, 0,5870, -,-, 809304 DNA hAT-Charlie 585 chrZ_NT_463586v1_random 48284 49217 CR1-C4 586 + 48284 49217 0 2 862,71, 0,862, +,+, 809318 LINE CR1 585 chrZ_NT_463586v1_random 62075 62592 GGLTR5A 378 + 62075 62592 0 2 267,194, 0,323, +,+, 809325 LTR ERVL 585 chrZ_NT_463586v1_random 79333 81009 CR1-E 631 + 79333 81009 0 2 1608,66, 0,1610, +,+, 809334 LINE CR1 585 chrZ_NT_463586v1_random 89501 91146 CR1-Y2_Aves 224 + 89501 91146 0 2 764,751, 0,894, +,+, 809342 LINE CR1 585 chrZ_NT_463588v1_random 38834 39859 CR1-D2 623 - 38834 39859 0 2 72,322, 0,703, -,-, 809380 LINE CR1 585 chrZ_NT_463588v1_random 72384 72946 CR1-Y1_Aves 397 + 72384 72946 0 2 82,405, 0,157, +,+, 809393 LINE CR1 585 chrZ_NT_463591v1_random 743 1391 CR1-C2 670 - 743 1391 0 2 156,443, 0,205, -,-, 809413 LINE CR1 585 chrZ_NT_463591v1_random 1365 2105 CR1-E 604 + 1365 2105 0 2 404,211, 0,529, +,+, 809414 LINE CR1 585 chrZ_NT_463591v1_random 5015 5761 CR1-E 717 + 5015 5761 0 2 410,211, 0,535, +,+, 809418 LINE CR1 585 chrZ_NT_463591v1_random 7273 8319 CR1-C2 590 - 7273 8319 0 3 44,255,455, 0,174,591, -,-,-, 809422 LINE CR1 585 chrZ_NT_463591v1_random 11498 12281 CR1-E 700 + 11498 12281 0 2 446,213, 0,570, +,+, 809426 LINE CR1 585 chrZ_NT_463591v1_random 13761 16036 CR1-E 768 + 13761 16036 0 3 34,443,212, 0,1496,2063, +,+,+, 809429 LINE CR1 585 chrZ_NT_463591v1_random 17515 19787 CR1-E 768 + 17515 19787 0 3 34,443,212, 0,1493,2060, +,+,+, 809433 LINE CR1 585 chrZ_NT_463591v1_random 21266 23540 CR1-E 768 + 21266 23540 0 3 34,443,212, 0,1495,2062, +,+,+, 809437 LINE CR1 585 chrZ_NT_463591v1_random 25019 27294 CR1-E 768 + 25019 27294 0 3 34,443,212, 0,1496,2063, +,+,+, 809441 LINE CR1 585 chrZ_NT_463591v1_random 28773 31048 CR1-E 768 + 28773 31048 0 3 34,443,212, 0,1496,2063, +,+,+, 809445 LINE CR1 585 chrZ_NT_463591v1_random 42342 45812 GGLTR10C1 915 - 42342 45812 0 3 364,2723,362, 0,364,3108, -,-,-, 809457 LTR ERVK 585 chrZ_NT_463592v1_random 3727 4584 CR1-Y2_Aves 99 - 3727 4584 0 2 349,496, 0,361, -,-, 809484 LINE CR1 585 chrZ_NT_463592v1_random 8303 9710 CR1-F 486 + 8303 9710 0 2 127,649, 0,758, +,+, 809492 LINE CR1 585 chrZ_NT_463593v1_random 612 6698 CR1-E 744 + 612 6698 0 3 377,155,1261, 0,4386,4825, +,+,+, 809499 LINE CR1 585 chrZ_NT_463593v1_random 1511 4984 GGERVL18-int 745 + 1511 4984 0 4 2511,494,274,194, 0,2511,3005,3279, +,+,+,+, 809501 LTR ERVL 585 chrZ_NT_463593v1_random 15068 21191 GGLTR7-int 310 - 15068 21191 0 2 165,130, 0,5993, -,-, 809511 LTR ERV1 585 chrZ_NT_463593v1_random 16441 18921 CR1-C 791 + 16441 18921 0 2 1447,540, 0,1940, +,+, 809512 LINE CR1 585 chrZ_NT_463593v1_random 23362 29347 GGERV28_I-int 180 - 23362 29347 0 2 319,4376, 0,1609, -,-, 809517 LTR ERVK 585 chrZ_NT_463594v1_random 5634 9245 GGLTR7A 867 + 5634 9245 0 2 3001,610, 0,3001, +,+, 809520 LTR ERV1 585 chrZ_NT_463594v1_random 11505 12498 CR1-Y2 775 + 11505 12498 0 2 405,283, 0,710, +,+, 809522 LINE CR1 585 chrZ_NT_463594v1_random 19668 23502 GGERVL-B-int 719 - 19668 23502 0 2 524,3277, 0,557, -,-, 809532 LTR ERVL 585 chrZ_NT_463596v1_random 5080 7381 CR1-C4 436 - 5080 7381 0 2 720,72, 0,2229, -,-, 809549 LINE CR1 585 chrZ_NT_463596v1_random 11681 18529 Char12Mar1_GG 475 - 11681 18529 0 2 314,222, 0,6626, -,-, 809557 DNA hAT-Charlie 585 chrZ_NT_463596v1_random 12979 15101 GGERV28_I-int 163 - 12979 15101 0 2 417,535, 0,1587, -,-, 809559 LTR ERVK 585 chrZ_NT_463596v1_random 15115 15969 GGLTR7-int 789 - 15115 15969 0 3 347,279,228, 0,347,626, -,-,-, 809561 LTR ERV1 585 chrZ_NT_463597v1_random 8333 10402 GGERVL-A-int 613 + 8333 10402 0 2 1985,72, 0,1997, +,+, 809574 LTR ERVL 585 chrZ_NT_463597v1_random 50249 51203 CR1-Y4 575 - 50249 51203 0 2 372,582, 0,372, -,-, 809600 LINE CR1 585 chrZ_NT_463598v1_random 493 10143 GGLTR7-int 497 - 493 10143 0 9 597,56,874,310,610,475,1310,1085,341, 0,597,1140,2438,3726,4974,5706,8222,9309, -,-,-,-,-,-,-,-,-, 809610 LTR ERV1 585 chrZ_NT_463598v1_random 10154 15110 GGERVL-A-int 741 - 10154 15110 0 10 85,88,318,512,568,342,1529,246,154,356, 0,85,173,491,1003,1608,1950,3632,3878,4600, -,-,-,-,-,-,-,-,-,-, 809617 LTR ERVL 585 chrZ_NT_463598v1_random 15245 29533 CR1-F 577 - 15245 29533 0 2 92,92, 0,14196, -,-, 809620 LINE CR1 585 chrZ_NT_463598v1_random 15450 17238 GGERVL-C-int 861 - 15450 17238 0 2 527,1261, 0,527, -,-, 809622 LTR ERVL 585 chrZ_NT_463598v1_random 18128 18965 GGLTR7-int 570 - 18128 18965 0 4 350,119,130,206, 0,351,496,631, -,-,-,-, 809623 LTR ERV1 585 chrZ_NT_463598v1_random 24768 29420 GGLTR3A 825 - 24768 29420 0 2 4126,526, 0,4126, -,-, 809626 LTR ERVL 585 chrZ_NT_463598v1_random 29535 39924 CR1-Y4 730 - 29535 39924 0 4 888,840,1631,997, 0,5009,7204,9392, -,-,-,-, 809627 LINE CR1 585 chrZ_NT_463598v1_random 30428 31117 ENS1B-LTR 457 + 30428 31117 0 2 455,160, 0,529, +,+, 809628 LTR ERVL 585 chrZ_NT_463598v1_random 31109 34433 GGERVL-A-int 812 + 31109 34433 0 2 1319,1525, 0,1799, +,+, 809630 LTR ERVL 585 chrZ_NT_463598v1_random 35382 35813 GGERVL-B-int 789 - 35382 35813 0 2 80,351, 0,80, -,-, 809633 LTR ERVL 585 chrZ_NT_463598v1_random 40991 44077 GGLTR7-int 548 + 40991 44077 0 3 557,1488,42, 0,652,3044, +,+,+, 809638 LTR ERV1 585 chrZ_NT_463598v1_random 43471 44033 GGLTR12A 821 - 43471 44033 0 2 321,241, 0,321, -,-, 809639 LTR ERVL 585 chrZ_NT_463598v1_random 45087 46489 GGLTR3F2 894 - 45087 46489 0 3 112,59,1217, 0,126,185, -,-,-, 809641 LTR ERVL 585 chrZ_NT_463599v1_random 9468 10824 GGERV10_LTR 916 + 9468 10824 0 2 1145,211, 0,1145, +,+, 809645 LTR ERVL 585 chrZ_NT_463600v1_random 1879 14419 CR1-Y 769 - 1879 14419 0 2 2027,457, 0,12083, -,-, 809660 LINE CR1 585 chrZ_NT_463600v1_random 3906 13962 GGLTR11 716 - 3906 13962 0 2 262,275, 0,9781, -,-, 809661 LTR ERV1 585 chrZ_NT_463600v1_random 4168 7124 GGERV10_LTR 911 - 4168 7124 0 2 211,2745, 0,211, -,-, 809662 LTR ERVL 585 chrZ_NT_463600v1_random 7124 7654 GGLTR3F1 913 - 7124 7654 0 2 494,36, 0,494, -,-, 809663 LTR ERVL 585 chrZ_NT_463600v1_random 11050 13692 GGERV20_I-int 927 - 11050 13692 0 3 400,2026,215, 0,400,2427, -,-,-, 809666 LTR ERVL 585 chrZ_NT_463600v1_random 17141 17551 GGLTR7B 597 + 17141 17551 0 2 229,181, 0,229, +,+, 809670 LTR ERV1 585 chrZ_NT_463600v1_random 17551 22644 GGLTR7B 455 - 17551 22644 0 4 321,2586,1744,321, 0,432,3026,4772, -,-,-,-, 809671 LTR ERV1 585 chrZ_NT_463600v1_random 22827 33111 GGLTR7-int 520 + 22827 33111 0 4 487,1157,585,128, 0,730,2722,10156, +,+,+,+, 809672 LTR ERV1 585 chrZ_NT_463600v1_random 25385 25457 GGLTR10C1 971 + 25385 25457 0 2 42,30, 0,42, +,+, 809673 LTR ERVK 585 chrZ_NT_463600v1_random 26484 32299 GGLTR3F1 889 + 26484 32299 0 2 496,5318, 0,497, +,+, 809674 LTR ERVL 585 chrZ_NT_463600v1_random 32300 32828 GGLTR3F1 918 + 32300 32828 0 3 35,231,211, 0,35,317, +,+,+, 809675 LTR ERVL 585 chrZ_NT_463600v1_random 33205 33543 CR1-F 566 + 33205 33543 0 2 183,114, 0,224, +,+, 809678 LINE CR1 585 chrZ_NT_463600v1_random 33570 34433 CR1-F 560 - 33570 34433 0 4 184,185,185,185, 0,226,451,678, -,-,-,-, 809679 LINE CR1 585 chrZ_NT_463600v1_random 34719 42189 CR1-F 495 - 34719 42189 0 6 173,176,166,177,178,186, 0,356,6423,6852,7071,7284, -,-,-,-,-,-, 809681 LINE CR1 585 chrZ_NT_463600v1_random 35314 41142 GGLTR7A 826 - 35314 41142 0 3 571,4834,420, 0,571,5408, -,-,-, 809682 LTR ERV1 585 chrZ_NT_463600v1_random 42196 45558 GGLTR10D 940 + 42196 45558 0 3 345,2672,345, 0,345,3017, +,+,+, 809684 LTR ERVK 585 chrZ_NT_463600v1_random 45603 49136 CR1-F 468 - 45603 49136 0 5 144,186,167,182,181, 0,2461,2690,3126,3352, -,-,-,-,-, 809685 LINE CR1 585 chrZ_NT_463600v1_random 46271 48028 GGLTR3A 696 - 46271 48028 0 2 1227,530, 0,1227, -,-, 809687 LTR ERVL 585 chrZ_NT_463600v1_random 49283 50160 GGLTR3F1 716 + 49283 50160 0 2 486,389, 0,488, +,+, 809690 LTR ERVL 585 chrZ_NT_463601v1_random 2854 3947 GGERVL18-LTR 709 + 2854 3947 0 2 766,327, 0,766, +,+, 809692 LTR ERVL 585 chrZ_NT_463601v1_random 10654 12482 CR1-C4 463 - 10654 12482 0 3 79,751,901, 0,79,927, -,-,-, 809703 LINE CR1 585 chrZ_NT_463601v1_random 13478 14492 GGLTR3B2 625 - 13478 14492 0 2 504,38, 0,976, -,-, 809705 LTR ERVL 585 chrZ_NT_463601v1_random 41469 42300 CR1-E 683 + 41469 42300 0 3 191,206,343, 0,275,488, +,+,+, 809748 LINE CR1 585 chrZ_NT_463602v1_random 19360 19908 CR1-C3 610 - 19360 19908 0 2 24,463, 0,85, -,-, 809767 LINE CR1 585 chrZ_NT_463604v1_random 2118 2195 (T)n 808 + 2118 2195 0 2 36,29, 0,48, +,+, 809787 Simple_repeat Simple_repeat 585 chrZ_NT_463604v1_random 3448 5404 CR1-C4 238 - 3448 5404 0 2 177,224, 0,1732, -,-, 809790 LINE CR1 585 chrZ_NT_463604v1_random 21734 21818 (T)n 795 + 21734 21818 0 2 40,32, 0,52, +,+, 809816 Simple_repeat Simple_repeat 585 chrZ_NT_463604v1_random 23180 25762 CR1-Y3 470 - 23180 25762 0 3 542,732,224, 0,1151,2358, -,-,-, 809819 LINE CR1 585 chrZ_NT_463604v1_random 41585 41668 (T)n 795 + 41585 41668 0 2 34,37, 0,46, +,+, 809840 Simple_repeat Simple_repeat 585 chrZ_NT_463605v1_random 19158 21819 GGLTR7-int 296 - 19158 21819 0 3 581,1106,707, 0,766,1954, -,-,-, 809851 LTR ERV1 585 chrZ_NT_463605v1_random 34330 37900 CR1-G 799 - 34330 37900 0 2 666,2904, 0,666, -,-, 809857 LINE CR1 585 chrZ_NT_463607v1_random 23097 24020 CR1-X1 513 + 23097 24020 0 2 755,168, 0,755, +,+, 809893 LINE CR1 585 chrZ_NT_463607v1_random 26171 28238 CR1-Y3 642 - 26171 28238 0 2 131,1035, 0,1032, -,-, 809894 LINE CR1 585 chrZ_NT_463608v1_random 12159 15369 GGLTR7-int 820 + 12159 15369 0 3 2303,293,613, 0,2303,2597, +,+,+, 809901 LTR ERV1 585 chrZ_NT_463608v1_random 22111 30736 Z-REP 598 - 22111 30736 0 3 4880,1101,2515, 0,4962,6110, -,-,-, 809906 Satellite macro 585 chrZ_NT_463609v1_random 4202 4498 CR1-X2 444 - 4202 4498 0 2 232,64, 0,232, -,-, 809913 LINE CR1 585 chrZ_NT_463609v1_random 5817 13365 Z-REP 846 + 5817 13365 0 2 6156,1228, 0,6320, +,+, 809915 Satellite macro 585 chrZ_NT_463609v1_random 29337 29632 CR1-X2 456 - 29337 29632 0 2 232,63, 0,232, -,-, 809925 LINE CR1 585 chrZ_NT_463610v1_random 8025 13431 Z-REP 890 - 8025 13431 0 2 4437,958, 0,4448, -,-, 809931 Satellite macro 585 chrZ_NT_463610v1_random 14189 19189 GGLTR7A 759 + 14189 19189 0 2 53,4936, 0,64, +,+, 809933 LTR ERV1 585 chrZ_NT_463610v1_random 19299 20139 GGLTR7-int 727 + 19299 20139 0 3 147,74,618, 0,147,222, +,+,+, 809935 LTR ERV1 585 chrZ_NT_463610v1_random 26145 32814 Z-REP 850 - 26145 32814 0 2 5691,967, 0,5702, -,-, 809942 Satellite macro 585 chrZ_NT_463612v1_random 6925 7222 CR1-X2 449 - 6925 7222 0 2 234,63, 0,234, -,-, 809967 LINE CR1 585 chrZ_NT_463612v1_random 8649 13744 Z-REP 911 + 8649 13744 0 2 4486,530, 0,4565, +,+, 809969 Satellite macro 585 chrZ_NT_463613v1_random 26579 27213 GGERVK1-int 409 + 26579 27213 0 2 105,86, 0,548, +,+, 809991 LTR ERVK 585 chrZ_NT_463613v1_random 28608 33120 GGERVK1-int 977 + 28608 33120 0 2 241,4271, 0,241, +,+, 809995 LTR ERVK 585 chrZ_NT_463615v1_random 4570 4965 (GCATG)n 424 + 4570 4965 0 2 155,60, 0,335, +,+, 810005 Simple_repeat Simple_repeat 585 chrZ_NT_463615v1_random 4931 5441 (CATAG)n 370 + 4931 5441 0 3 104,18,22, 0,290,488, +,+,+, 810007 Simple_repeat Simple_repeat 585 chrZ_NT_463615v1_random 26509 27134 CR1-Y2_Aves 258 + 26509 27134 0 2 143,305, 0,320, +,+, 810031 LINE CR1 585 chrZ_NT_463616v1_random 3515 4045 GGLTR3F1 936 + 3515 4045 0 2 36,494, 0,36, +,+, 810037 LTR ERVL 585 chrZ_NT_463616v1_random 4045 5304 GGERVL-A-int 574 + 4045 5304 0 2 585,356, 0,903, +,+, 810038 LTR ERVL 585 chrZ_NT_463616v1_random 7571 10102 GGERVK10-int 825 - 7571 10102 0 3 360,865,1197, 0,360,1334, -,-,-, 810042 LTR ERVK 585 chrZ_NT_463616v1_random 14210 18309 EAVHP_I-int 940 - 14210 18309 0 4 286,1366,2148,284, 0,286,1665,3815, -,-,-,-, 810047 LTR ERVK 585 chrZ_NT_463616v1_random 21340 23637 GGERVL-A-int 491 - 21340 23637 0 2 336,263, 0,2034, -,-, 810052 LTR ERVL 585 chrZ_NT_463616v1_random 28556 30759 GGERVK10-int 720 + 28556 30759 0 2 360,1835, 0,368, +,+, 810060 LTR ERVK 585 chrZ_NT_463617v1_random 1024 2025 (CCTCG)n 561 + 1024 2025 0 4 189,155,55,227, 0,209,542,774, +,+,+,+, 810066 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 2115 2871 (CCTCG)n 580 + 2115 2871 0 2 474,105, 0,651, +,+, 810070 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 2924 3765 (CCTCG)n 550 + 2924 3765 0 3 183,214,258, 0,183,583, +,+,+, 810073 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 3780 4877 (CCTCG)n 583 + 3780 4877 0 4 260,75,183,215, 0,418,523,882, +,+,+,+, 810077 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 4969 5618 (CCTCG)n 630 + 4969 5618 0 2 212,228, 0,421, +,+, 810081 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 6832 8085 (CCTCG)n 623 + 6832 8085 0 3 372,278,364, 0,551,889, +,+,+, 810089 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 8525 10042 (CCTCG)n 608 + 8525 10042 0 4 476,372,94,181, 0,661,1211,1336, +,+,+,+, 810095 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 10114 11292 (CCTCG)n 543 + 10114 11292 0 3 106,70,796, 0,290,382, +,+,+, 810099 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 11812 13550 (CCTCG)n 541 + 11812 13550 0 5 585,200,199,165,284, 0,763,963,1162,1454, +,+,+,+,+, 810105 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 14694 15517 (CCTCG)n 532 + 14694 15517 0 2 616,181, 0,642, +,+, 810115 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 15611 18770 (CCTCG)n 555 + 15611 18770 0 10 625,404,178,236,26,31,181,360,179,354, 0,660,1089,1290,1705,1912,1980,2205,2601,2805, +,+,+,+,+,+,+,+,+,+, 810117 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 19066 22293 (CCTCG)n 562 + 19066 22293 0 5 1099,486,273,418,132, 0,1286,2048,2499,3095, +,+,+,+,+, 810123 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 22806 25363 GGERV28_I-int 179 - 22806 25363 0 3 1582,173,504, 0,1609,2053, -,-,-, 810128 LTR ERVK 585 chrZ_NT_463617v1_random 26635 29810 (CCTCG)n 576 + 26635 29810 0 8 644,499,174,8,217,223,123,125, 0,644,1184,1712,1952,2181,2744,3050, +,+,+,+,+,+,+,+, 810130 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 29886 30649 (CCTCG)n 659 + 29886 30649 0 2 213,548, 0,215, +,+, 810136 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 30435 30973 (CCTTG)n 468 + 30435 30973 0 2 259,97, 0,441, +,+, 810137 Simple_repeat Simple_repeat 585 chrZ_NT_463617v1_random 30903 31555 (CCTCG)n 588 + 30903 31555 0 2 100,165, 0,487, +,+, 810139 Simple_repeat Simple_repeat 585 chrZ_NT_463619v1_random 19983 24149 CR1-Y 634 - 19983 24149 0 2 2126,1625, 0,2541, -,-, 810155 LINE CR1 585 chrZ_NT_463619v1_random 27450 27813 CR1-C4 566 + 27450 27813 0 2 275,88, 0,275, +,+, 810159 LINE CR1 585 chrZ_NT_463619v1_random 28216 29972 GGLTR5A 409 + 28216 29972 0 3 90,257,134, 0,1347,1622, +,+,+, 810160 LTR ERVL 585 chrZ_NT_463619v1_random 28309 29567 CR1-E 651 - 28309 29567 0 2 549,707, 0,551, -,-, 810161 LINE CR1 585 chrZ_NT_463620v1_random 51 2475 GGLTR7-int 857 + 51 2475 0 3 591,1349,484, 0,591,1940, +,+,+, 810165 LTR ERV1 585 chrZ_NT_463620v1_random 9665 13062 GGERVL18-int 528 - 9665 13062 0 4 340,1481,23,1553, 0,340,1821,1844, -,-,-,-, 810171 LTR ERVL 585 chrZ_NT_463620v1_random 23149 24819 ENS1B-LTR 727 - 23149 24819 0 3 180,576,694, 0,400,976, -,-,-, 810182 LTR ERVL 585 chrZ_NT_463620v1_random 24886 30036 GGERVL-B-int 744 + 24886 30036 0 2 798,4324, 0,826, +,+, 810185 LTR ERVL 585 chrZ_NT_463620v1_random 30036 30561 GGLTR3F1 914 + 30036 30561 0 2 36,489, 0,36, +,+, 810187 LTR ERVL 585 chrZ_NT_463622v1_random 1872 2915 CR1-C4 400 - 1872 2915 0 2 87,516, 0,527, -,-, 810195 LINE CR1 585 chrZ_NT_463622v1_random 1960 2388 CR1-D2 523 + 1960 2388 0 2 226,202, 0,226, +,+, 810196 LINE CR1 585 chrZ_NT_463622v1_random 4438 4845 CR1-D2 718 - 4438 4845 0 2 177,230, 0,177, -,-, 810198 LINE CR1 585 chrZ_NT_463622v1_random 6948 14799 Char12Mar1_GG 595 - 6948 14799 0 2 429,92, 0,7759, -,-, 810200 DNA hAT-Charlie 585 chrZ_NT_463622v1_random 28718 30665 Charlie12_GG 663 - 28718 30665 0 4 1429,105,28,104, 0,1708,1813,1843, -,-,-,-, 810211 DNA hAT-Charlie 585 chrZ_NT_463623v1_random 856 2185 GGERVL-A-int 713 + 856 2185 0 2 49,1280, 0,49, +,+, 810215 LTR ERVL 585 chrZ_NT_463623v1_random 12609 13516 G-rich 344 + 12609 13516 0 2 423,429, 0,478, +,+, 810226 Low_complexity Low_complexity 585 chrZ_NT_463623v1_random 15924 18403 GGLTR7-int 567 + 15924 18403 0 2 357,792, 0,1687, +,+, 810229 LTR ERV1 585 chrZ_NT_463623v1_random 18598 20880 GGLTR10D-int 842 - 18598 20880 0 2 374,1905, 0,377, -,-, 810232 LTR ERVK 585 chrZ_NT_463623v1_random 21634 22211 (CGAGG)n 461 + 21634 22211 0 2 198,362, 0,215, +,+, 810237 Simple_repeat Simple_repeat 585 chrZ_NT_463623v1_random 22991 23930 (CGAGG)n 495 + 22991 23930 0 2 699,178, 0,761, +,+, 810239 Simple_repeat Simple_repeat 585 chrZ_NT_463624v1_random 3323 6372 GGERVL-B-int 654 + 3323 6372 0 3 491,1125,1432, 0,492,1617, +,+,+, 810253 LTR ERVL 585 chrZ_NT_463624v1_random 6372 9355 GGLTR11 814 - 6372 9355 0 2 535,498, 0,2485, -,-, 810254 LTR ERV1 585 chrZ_NT_463624v1_random 7195 8050 GGERVL-B-int 819 + 7195 8050 0 2 578,275, 0,580, +,+, 810255 LTR ERVL 585 chrZ_NT_463624v1_random 20575 23096 CR1-G 206 - 20575 23096 0 4 135,166,1012,71, 0,511,1356,2450, -,-,-,-, 810260 LINE CR1 585 chrZ_NT_463624v1_random 20710 21284 CR1-Y 424 - 20710 21284 0 2 376,133, 0,441, -,-, 810261 LINE CR1 585 chrZ_NT_463626v1_random 11349 11499 G-rich 586 + 11349 11499 0 2 37,59, 0,91, +,+, 810273 Low_complexity Low_complexity 585 chrZ_NT_463626v1_random 13036 14239 GGLTR7-int 754 - 13036 14239 0 5 615,70,148,39,53, 0,616,689,1100,1150, -,-,-,-,-, 810275 LTR ERV1 585 chrZ_NT_463626v1_random 15013 17444 Z-REP 778 + 15013 17444 0 2 155,1519, 0,912, +,+, 810278 Satellite macro 585 chrZ_NT_463627v1_random 6961 7110 G-rich 604 + 6961 7110 0 2 38,59, 0,90, +,+, 810290 Low_complexity Low_complexity 585 chrZ_NT_463628v1_random 3779 8359 GGLTR7-int 776 - 3779 8359 0 5 614,913,526,877,1286, 0,615,1530,2065,3294, -,-,-,-,-, 810296 LTR ERV1 585 chrZ_NT_463628v1_random 9248 10618 Z-REP 753 + 9248 10618 0 2 155,459, 0,911, +,+, 810299 Satellite macro 585 chrZ_NT_463629v1_random 8770 14133 GGLTR7-int 740 - 8770 14133 0 7 113,253,851,218,1984,1735,45, 0,113,369,1220,1438,3571,5318, -,-,-,-,-,-,-, 810305 LTR ERV1 585 chrZ_NT_463632v1_random 375 2164 GGXHOI 387 - 375 2164 0 3 392,1050,271, 0,450,1518, -,-,-, 810311 Satellite W-chromosome 585 chrZ_NT_463632v1_random 2510 5917 GGXHOI 368 - 2510 5917 0 3 763,1556,984, 0,825,2423, -,-,-, 810312 Satellite W-chromosome 585 chrZ_NT_463632v1_random 5999 9181 GGXHOI 380 - 5999 9181 0 2 1338,1786, 0,1396, -,-, 810313 Satellite W-chromosome 585 chrZ_NT_463632v1_random 9321 15925 GGXHOI 377 - 9321 15925 0 3 1711,3546,1309, 0,1732,5295, -,-,-, 810314 Satellite W-chromosome 585 chrZ_NT_463632v1_random 16131 17166 GGXHOI 375 - 16131 17166 0 2 612,381, 0,654, -,-, 810315 Satellite W-chromosome 585 chrZ_NT_463633v1_random 11470 17967 Z-REP 798 + 11470 17967 0 2 1725,4623, 0,1874, +,+, 810329 Satellite macro 585 chrZ_NT_463634v1_random 18928 19526 GGLTR5B 488 + 18928 19526 0 2 483,88, 0,510, +,+, 810347 LTR ERVL 585 chrZ_NT_463636v1_random 7941 15171 Z-REP 850 + 7941 15171 0 2 1737,5442, 0,1788, +,+, 810365 Satellite macro 585 chrZ_NT_463636v1_random 19087 19239 G-rich 611 + 19087 19239 0 2 38,62, 0,90, +,+, 810369 Low_complexity Low_complexity 585 chrZ_NT_463636v1_random 21187 22391 GGLTR7A 822 - 21187 22391 0 3 112,259,831, 0,113,373, -,-,-, 810371 LTR ERV1 585 chrZ_NT_463636v1_random 22385 26706 GGLTR7A 792 - 22385 26706 0 2 245,4076, 0,245, -,-, 810372 LTR ERV1 585 chrZ_NT_463637v1_random 21542 23408 CR1-D 524 - 21542 23408 0 3 958,468,155, 0,1243,1711, -,-,-, 810397 LINE CR1 585 chrZ_NT_463638v1_random 14798 15073 CR1-X2 429 - 14798 15073 0 2 212,63, 0,212, -,-, 810413 LINE CR1 585 chrZ_NT_463638v1_random 16678 23067 Z-REP 853 + 16678 23067 0 4 1897,2451,925,1010, 0,1953,4415,5379, +,+,+,+, 810415 Satellite macro 585 chrZ_NT_463638v1_random 27021 27170 G-rich 513 + 27021 27170 0 2 37,59, 0,90, +,+, 810420 Low_complexity Low_complexity 585 chrZ_NT_463639v1_random 5598 5803 GGERVL-C-int 689 + 5598 5803 0 2 94,111, 0,94, +,+, 810427 LTR ERVL 585 chrZ_NT_463639v1_random 6306 16535 GGLTR3F1 850 + 6306 16535 0 8 231,83,4819,482,231,80,170,102, 0,400,485,8967,9449,9857,9939,10127, +,+,+,+,+,+,+,+, 810430 LTR ERVL 585 chrZ_NT_463639v1_random 11622 15276 CR1-F 919 + 11622 15276 0 2 139,3515, 0,139, +,+, 810433 LINE CR1 585 chrZ_NT_463639v1_random 17524 18504 GGERV20_I-int 353 + 17524 18504 0 3 454,391,122, 0,467,858, +,+,+, 810437 LTR ERVL 585 chrZ_NT_463639v1_random 18913 20891 GGERVL-C-int 763 - 18913 20891 0 4 65,447,131,104, 0,931,1378,1874, -,-,-,-, 810439 LTR ERVL 585 chrZ_NT_463641v1_random 2818 3111 CR1-X2 449 + 2818 3111 0 2 67,226, 0,67, +,+, 810452 LINE CR1 585 chrZ_NT_463642v1_random 14558 20486 GGERV10_LTR 859 - 14558 20486 0 4 159,62,5377,222, 0,266,328,5706, -,-,-,-, 810469 LTR ERVL 585 chrZ_NT_463642v1_random 22648 24646 CR1-F 852 + 22648 24646 0 2 341,1391, 0,607, +,+, 810472 LINE CR1 585 chrZ_NT_463643v1_random 3762 4039 CR1-X2 390 + 3762 4039 0 2 63,214, 0,63, +,+, 810487 LINE CR1 585 chrZ_NT_463643v1_random 20385 26730 Z-REP 846 - 20385 26730 0 2 5726,608, 0,5737, -,-, 810496 Satellite macro 585 chrZ_NT_463646v1_random 302 3117 Z-REP 833 - 302 3117 0 2 1627,1128, 0,1687, -,-, 810546 Satellite macro 585 chrZ_NT_463647v1_random 13648 14396 CR1-F 283 - 13648 14396 0 2 581,167, 0,581, -,-, 810556 LINE CR1 585 chrZ_NT_463649v1_random 480 3806 GGLTR7-int 796 + 480 3806 0 3 53,39,3211, 0,64,115, +,+,+, 810564 LTR ERV1 585 chrZ_NT_463649v1_random 3803 6046 GGLTR7-int 791 + 3803 6046 0 5 73,361,1436,258,113, 0,73,434,1871,2130, +,+,+,+,+, 810565 LTR ERV1 585 chrZ_NT_463649v1_random 12311 19610 Z-REP 886 - 12311 19610 0 2 5511,1736, 0,5563, -,-, 810570 Satellite macro 585 chrZ_NT_463649v1_random 21215 21493 CR1-X2 400 + 21215 21493 0 2 63,215, 0,63, +,+, 810573 LINE CR1 585 chrZ_NT_463650v1_random 4886 5035 G-rich 556 + 4886 5035 0 2 37,59, 0,90, +,+, 810579 Low_complexity Low_complexity 585 chrZ_NT_463650v1_random 6989 8705 GGLTR7A 797 - 6989 8705 0 3 114,257,1343, 0,115,373, -,-,-, 810581 LTR ERV1 585 chrZ_NT_463650v1_random 24671 25009 CR1-F2 376 + 24671 25009 0 2 125,213, 0,125, +,+, 810592 LINE CR1 585 chrZ_NT_463651v1_random 3711 4162 GGLTR7B 505 + 3711 4162 0 2 316,126, 0,325, +,+, 810596 LTR ERV1 585 chrZ_NT_463651v1_random 5096 5942 GGLTR7-int 787 - 5096 5942 0 3 355,256,213, 0,355,633, -,-,-, 810597 LTR ERV1 585 chrZ_NT_463651v1_random 6180 9817 GGERV28_I-int 157 - 6180 9817 0 3 1992,374,674, 0,2307,2963, -,-,-, 810598 LTR ERVK 585 chrZ_NT_463653v1_random 1249 5493 Z-REP 843 + 1249 5493 0 2 937,3267, 0,977, +,+, 810603 Satellite macro 585 chrZ_NT_463653v1_random 23778 24034 CR1-X1 570 - 23778 24034 0 2 120,63, 0,193, -,-, 810613 LINE CR1 585 chrZ_NT_463656v1_random 3182 3528 CR1-F2 315 + 3182 3528 0 2 42,234, 0,112, +,+, 810642 LINE CR1 585 chrZ_NT_463656v1_random 3553 10902 Z-REP 787 + 3553 10902 0 3 386,1589,5332, 0,401,2017, +,+,+, 810644 Satellite macro 585 chrZ_NT_463656v1_random 19277 20479 GGLTR7A 835 - 19277 20479 0 3 113,259,828, 0,114,374, -,-,-, 810651 LTR ERV1 585 chrZ_NT_463656v1_random 20473 24553 GGLTR7-int 786 - 20473 24553 0 3 245,3338,471, 0,246,3609, -,-,-, 810652 LTR ERV1 585 chrZ_NT_463659v1_random 6043 9255 GGLTR7-int 819 + 6043 9255 0 3 2304,293,614, 0,2304,2598, +,+,+, 810660 LTR ERV1 585 chrZ_NT_463659v1_random 15968 24168 Z-REP 749 - 15968 24168 0 2 7234,860, 0,7340, -,-, 810665 Satellite macro 585 chrZ_NT_463660v1_random 3992 9507 Z-REP 879 - 3992 9507 0 2 1004,4484, 0,1031, -,-, 810669 Satellite macro 585 chrZ_NT_463661v1_random 7911 9891 CR1-F 829 + 7911 9891 0 3 119,1706,53, 0,221,1927, +,+,+, 810675 LINE CR1 585 chrZ_NT_463661v1_random 12048 12854 GGLTR11-int 189 + 12048 12854 0 2 460,226, 0,580, +,+, 810679 LTR ERV1 585 chrZ_NT_463661v1_random 13211 14564 GGLTR7-int 408 + 13211 14564 0 4 790,81,203,175, 0,820,928,1178, +,+,+,+, 810680 LTR ERV1 585 chrZ_NT_463664v1_random 1149 3394 GGLTR7-int 709 + 1149 3394 0 2 87,2122, 0,123, +,+, 810702 LTR ERV1 585 chrZ_NT_463664v1_random 9416 18219 Z-REP 693 - 9416 18219 0 2 7898,155, 0,8648, -,-, 810705 Satellite macro 585 chrZ_NT_463665v1_random 13163 19833 Z-REP 710 - 13163 19833 0 2 5701,958, 0,5712, -,-, 810716 Satellite macro 585 chrZ_NT_463665v1_random 20579 22717 GGLTR7-int 753 + 20579 22717 0 3 53,47,139, 0,64,1999, +,+,+, 810718 LTR ERV1 585 chrZ_NT_463668v1_random 3742 6717 GGLTR7-int 789 + 3742 6717 0 2 1854,1121, 0,1854, +,+, 810733 LTR ERV1 585 chrZ_NT_463668v1_random 6711 7628 GGLTR7-int 726 + 6711 7628 0 5 95,165,288,251,113, 0,96,261,553,804, +,+,+,+,+, 810734 LTR ERV1 585 chrZ_NT_463668v1_random 14892 20293 Z-REP 805 - 14892 20293 0 2 4437,952, 0,4449, -,-, 810740 Satellite macro 585 chrZ_NT_463669v1_random 2251 3625 GGXHOI 372 - 2251 3625 0 2 556,800, 0,574, -,-, 810746 Satellite W-chromosome 585 chrZ_NT_463669v1_random 3684 9472 GGERV10_LTR 939 - 3684 9472 0 3 219,5354,214, 0,219,5574, -,-,-, 810747 LTR ERVL 585 chrZ_NT_463670v1_random 12123 20922 Z-REP 689 + 12123 20922 0 2 155,7894, 0,905, +,+, 810760 Satellite macro 585 chrZ_NT_463677v1_random 520 1142 CR1-H 379 + 520 1142 0 2 209,377, 0,245, +,+, 810805 LINE CR1 585 chrZ_NT_463677v1_random 3022 3646 CR1-H 378 + 3022 3646 0 2 209,379, 0,245, +,+, 810808 LINE CR1 585 chrZ_NT_463677v1_random 5527 6151 CR1-H 378 + 5527 6151 0 2 209,379, 0,245, +,+, 810811 LINE CR1 585 chrZ_NT_463677v1_random 8032 8656 CR1-H 378 + 8032 8656 0 2 209,379, 0,245, +,+, 810814 LINE CR1 585 chrZ_NT_463677v1_random 10537 11161 CR1-H 378 + 10537 11161 0 2 209,379, 0,245, +,+, 810817 LINE CR1 585 chrZ_NT_463677v1_random 13042 13666 CR1-H 378 + 13042 13666 0 2 209,379, 0,245, +,+, 810820 LINE CR1 585 chrZ_NT_463677v1_random 20310 21453 CR1-C2 575 - 20310 21453 0 2 75,133, 0,1010, -,-, 810828 LINE CR1 585 chrZ_NT_463678v1_random 9049 14872 GGERV10_LTR 978 - 9049 14872 0 3 220,5385,217, 0,220,5606, -,-,-, 810836 LTR ERVL 585 chrZ_NT_463678v1_random 16616 21870 GGERV10_LTR 970 - 16616 21870 0 2 220,5034, 0,220, -,-, 810839 LTR ERVL 585 chrZ_NT_463681v1_random 16726 17020 CR1-X2 467 + 16726 17020 0 2 63,231, 0,63, +,+, 810855 LINE CR1 585 chrZ_NT_463682v1_random 14057 14350 CR1-X2 434 - 14057 14350 0 2 230,63, 0,230, -,-, 810869 LINE CR1 585 chrZ_NT_463683v1_random 313 5762 CR1-C4 443 + 313 5762 0 3 356,416,1395, 0,498,4054, +,+,+, 810873 LINE CR1 585 chrZ_NT_463683v1_random 3261 4214 GGLTR7-int 795 + 3261 4214 0 3 218,286,444, 0,223,509, +,+,+, 810878 LTR ERV1 585 chrZ_NT_463683v1_random 13032 15397 CR1-Y 733 - 13032 15397 0 2 1242,374, 0,1991, -,-, 810886 LINE CR1 585 chrZ_NT_463684v1_random 9230 18111 Z-REP 747 + 9230 18111 0 2 147,7984, 0,897, +,+, 810905 Satellite macro 585 chrZ_NT_463686v1_random 3549 4213 GGLTR4B 317 + 3549 4213 0 2 357,302, 0,362, +,+, 810926 LTR ERVL 585 chrZ_NT_463686v1_random 13021 15392 CR1-X2 131 - 13021 15392 0 3 637,1148,394, 0,702,1977, -,-,-, 810934 LINE CR1 585 chrZ_NT_463687v1_random 77 486 (CGAGG)n 518 + 77 486 0 2 180,54, 0,355, +,+, 810945 Simple_repeat Simple_repeat 585 chrZ_NT_463687v1_random 586 2090 (CGAGG)n 543 + 586 2090 0 3 548,130,632, 0,731,872, +,+,+, 810947 Simple_repeat Simple_repeat 585 chrZ_NT_463687v1_random 2468 4293 (CGAGG)n 530 + 2468 4293 0 2 1001,768, 0,1057, +,+, 810951 Simple_repeat Simple_repeat 585 chrZ_NT_463687v1_random 4342 5098 (CGAGG)n 527 + 4342 5098 0 2 179,557, 0,199, +,+, 810953 Simple_repeat Simple_repeat 585 chrZ_NT_463687v1_random 7190 9872 (CGAGG)n 537 + 7190 9872 0 7 178,428,650,485,97,16,384, 0,215,659,1341,1826,2103,2298, +,+,+,+,+,+,+, 810962 Simple_repeat Simple_repeat 585 chrZ_NT_463687v1_random 9915 11890 (CGAGG)n 542 + 9915 11890 0 6 186,178,180,179,829,243, 0,223,436,641,855,1732, +,+,+,+,+,+, 810966 Simple_repeat Simple_repeat 585 chrZ_NT_463687v1_random 11932 12852 (CGAGG)n 527 + 11932 12852 0 4 179,180,141,191, 0,208,408,729, +,+,+,+, 810968 Simple_repeat Simple_repeat 585 chrZ_NT_463688v1_random 4818 4976 G-rich 522 + 4818 4976 0 2 38,68, 0,90, +,+, 810977 Low_complexity Low_complexity 585 chrZ_NT_463688v1_random 10604 14248 GGLTR7A 761 - 10604 14248 0 4 133,234,1443,1833, 0,133,368,1811, -,-,-,-, 810983 LTR ERV1 585 chrZ_NT_463688v1_random 17301 20928 Z-REP 786 + 17301 20928 0 3 297,1595,1694, 0,311,1933, +,+,+, 810987 Satellite macro 585 chrZ_NT_463689v1_random 8893 11209 CR1-C 670 + 8893 11209 0 2 733,1522, 0,794, +,+, 810996 LINE CR1 585 chrZ_NT_463690v1_random 15141 20866 Z-REP 863 - 15141 20866 0 2 5428,241, 0,5484, -,-, 811006 Satellite macro 585 chrZ_NT_463691v1_random 5824 9975 GGLTR7A 593 - 5824 9975 0 4 112,143,1415,2437, 0,112,255,1714, -,-,-,-, 811012 LTR ERV1 585 chrZ_NT_463691v1_random 10800 17483 Z-REP 902 + 10800 17483 0 2 959,5713, 0,970, +,+, 811015 Satellite macro 585 chrZ_NT_463693v1_random 11195 11487 CR1-X2 448 + 11195 11487 0 2 62,230, 0,62, +,+, 811024 LINE CR1 585 chrZ_NT_463694v1_random 1597 8966 Z-REP 750 + 1597 8966 0 3 831,900,5511, 0,901,1858, +,+,+, 811030 Satellite macro 585 chrZ_NT_463697v1_random 14268 19795 Z-REP 866 + 14268 19795 0 2 967,4549, 0,978, +,+, 811051 Satellite macro 585 chrZ_NT_463698v1_random 3266 8562 GGLTR7-int 767 - 3266 8562 0 5 113,251,167,725,4031, 0,117,373,540,1265, -,-,-,-,-, 811056 LTR ERV1 585 chrZ_NT_463698v1_random 9394 15970 Z-REP 896 + 9394 15970 0 2 958,5607, 0,969, +,+, 811059 Satellite macro 585 chrZ_NT_463700v1_random 5650 5930 CR1-X2 390 + 5650 5930 0 2 65,215, 0,65, +,+, 811065 LINE CR1 585 chrZ_NT_463701v1_random 3674 4759 CR1-G 359 + 3674 4759 0 2 182,186, 0,899, +,+, 811072 LINE CR1 585 chrZ_NT_463701v1_random 9228 10455 GGERV20_I-int 783 - 9228 10455 0 3 61,181,505, 0,63,722, -,-,-, 811078 LTR ERVL 585 chrZ_NT_463701v1_random 9471 9953 CR1-F2 849 - 9471 9953 0 2 167,315, 0,167, -,-, 811079 LINE CR1 585 chrZ_NT_463701v1_random 10455 16630 GGLTR1 957 + 10455 16630 0 3 241,5693,241, 0,241,5934, +,+,+, 811080 LTR ERVK 585 chrZ_NT_463704v1_random 6330 9455 GGLTR7-int 410 - 6330 9455 0 4 277,949,1641,116, 0,324,1368,3009, -,-,-,-, 811097 LTR ERV1 585 chrZ_NT_463704v1_random 15852 18757 GGERV28_I-int 185 - 15852 18757 0 4 274,471,309,503, 0,727,1621,2402, -,-,-,-, 811106 LTR ERVK 585 chrZ_NT_463708v1_random 574 1347 GGLTR7A 695 + 574 1347 0 4 146,77,204,320, 0,146,224,453, +,+,+,+, 811139 LTR ERV1 585 chrZ_NT_463708v1_random 8911 15004 Z-REP 856 - 8911 15004 0 2 4044,1993, 0,4100, -,-, 811147 Satellite macro 585 chrZ_NT_463708v1_random 18093 18331 CR1-X1 377 + 18093 18331 0 2 64,174, 0,64, +,+, 811153 LINE CR1 585 chrZ_NT_463710v1_random 18381 18435 (CCCCA)n 468 + 18381 18435 0 2 13,6, 0,48, +,+, 811163 Simple_repeat Simple_repeat 585 chrZ_NT_463712v1_random 9408 12363 GGERV28_I-int 98 - 9408 12363 0 2 2180,669, 0,2286, -,-, 811178 LTR ERVK 585 chrZ_NT_463712v1_random 13891 17433 GGLTR7-int 425 - 13891 17433 0 4 277,945,1634,103, 0,324,1342,3439, -,-,-,-, 811179 LTR ERV1 585 chrZ_NT_463713v1_random 16876 17151 CR1-X2 361 - 16876 17151 0 2 212,63, 0,212, -,-, 811193 LINE CR1 585 chrZ_NT_463715v1_random 2845 10121 Z-REP 818 - 2845 10121 0 2 1133,6071, 0,1205, -,-, 811202 Satellite macro 585 chrZ_NT_463715v1_random 11725 12007 CR1-X2 450 + 11725 12007 0 2 63,219, 0,63, +,+, 811204 LINE CR1 585 chrZ_NT_463718v1_random 4428 5051 CR1-H 683 + 4428 5051 0 2 478,139, 0,484, +,+, 811225 LINE CR1 585 chrZ_NT_463720v1_random 10249 10776 GGLTR3F1 930 - 10249 10776 0 2 491,36, 0,491, -,-, 811275 LTR ERVL 585 chrZ_NT_463720v1_random 10776 16584 GGLTR3F1 900 - 10776 16584 0 2 5313,494, 0,5314, -,-, 811276 LTR ERVL 585 chrZ_NT_463721v1_random 5389 8521 GGLTR7-int 414 + 5389 8521 0 4 116,1648,949,277, 0,116,1859,2855, +,+,+,+, 811290 LTR ERV1 585 chrZ_NT_463725v1_random 10610 10907 CR1-X2 474 + 10610 10907 0 2 63,234, 0,63, +,+, 811324 LINE CR1 585 chrZ_NT_463730v1_random 1071 4178 GGLTR7-int 780 + 1071 4178 0 5 1302,127,1300,253,112, 0,1302,1440,2741,2995, +,+,+,+,+, 811360 LTR ERV1 585 chrZ_NT_463730v1_random 10237 17474 Z-REP 841 - 10237 17474 0 2 6928,295, 0,6942, -,-, 811366 Satellite macro 585 chrZ_NT_463731v1_random 356 857 CR1-F2 456 + 356 857 0 2 145,356, 0,145, +,+, 811370 LINE CR1 585 chrZ_NT_463731v1_random 910 7033 Z-REP 881 + 910 7033 0 2 954,5158, 0,965, +,+, 811371 Satellite macro 585 chrZ_NT_463734v1_random 2331 6298 GGLTR7-int 785 - 2331 6298 0 6 111,257,1551,336,136,68, 0,112,374,1934,2270,3899, -,-,-,-,-,-, 811391 LTR ERV1 585 chrZ_NT_463734v1_random 7343 11709 GGLTR7A 839 - 7343 11709 0 2 609,3757, 0,609, -,-, 811396 LTR ERV1 585 chrZ_NT_463734v1_random 13658 18417 Z-REP 724 + 13658 18417 0 3 155,1976,1845, 0,911,2914, +,+,+, 811400 Satellite macro 585 chrZ_NT_463737v1_random 9131 9423 CR1-X2 452 - 9131 9423 0 2 229,63, 0,229, -,-, 811411 LINE CR1 585 chrZ_NT_463737v1_random 12153 12341 CR1-F0 539 + 12153 12341 0 2 129,45, 0,143, +,+, 811413 LINE CR1 585 chrZ_NT_463738v1_random 9005 9300 CR1-X2 463 + 9005 9300 0 2 63,232, 0,63, +,+, 811417 LINE CR1 585 chrZ_NT_463739v1_random 3692 9550 GGERV10_LTR 959 - 3692 9550 0 3 222,5415,220, 0,222,5638, -,-,-, 811425 LTR ERVL 585 chrZ_NT_463740v1_random 3140 3764 CR1-H 378 + 3140 3764 0 2 209,379, 0,245, +,+, 811433 LINE CR1 585 chrZ_NT_463740v1_random 5644 6268 CR1-H 378 + 5644 6268 0 2 209,379, 0,245, +,+, 811436 LINE CR1 585 chrZ_NT_463740v1_random 8148 8772 CR1-H 378 + 8148 8772 0 2 209,379, 0,245, +,+, 811439 LINE CR1 585 chrZ_NT_463740v1_random 15376 16507 CR1-C2 547 - 15376 16507 0 2 75,130, 0,1001, -,-, 811447 LINE CR1 585 chrZ_NT_463740v1_random 16530 17144 CR1-H 366 + 16530 17144 0 2 202,376, 0,238, +,+, 811449 LINE CR1 585 chrZ_NT_463742v1_random 2754 10224 Z-REP 758 + 2754 10224 0 2 540,6868, 0,602, +,+, 811462 Satellite macro 585 chrZ_NT_463742v1_random 14241 14388 G-rich 517 + 14241 14388 0 2 37,55, 0,92, +,+, 811465 Low_complexity Low_complexity 585 chrZ_NT_463745v1_random 3466 7737 GGLTR7-int 760 + 3466 7737 0 5 53,39,386,3159,607, 0,64,115,504,3664, +,+,+,+,+, 811474 LTR ERV1 585 chrZ_NT_463749v1_random 2201 3820 GGXHOI 364 - 2201 3820 0 2 552,1049, 0,570, -,-, 811485 Satellite W-chromosome 585 chrZ_NT_463749v1_random 7616 9218 GGXHOI 359 - 7616 9218 0 3 558,764,221, 0,576,1381, -,-,-, 811487 Satellite W-chromosome 585 chrZ_NT_463749v1_random 11324 17105 GGERV10_LTR 951 - 11324 17105 0 3 218,5345,217, 0,218,5564, -,-,-, 811490 LTR ERVL 585 chrZ_NT_463750v1_random 6227 6287 (CCCCTC)n 478 + 6227 6287 0 2 8,6, 0,54, +,+, 811496 Simple_repeat Simple_repeat 585 chrZ_NT_463750v1_random 7835 10905 GGLTR7-int 374 + 7835 10905 0 4 117,1679,876,277, 0,117,1868,2793, +,+,+,+, 811498 LTR ERV1 585 chrZ_NT_463751v1_random 899 1192 CR1-X2 455 + 899 1192 0 2 63,229, 0,64, +,+, 811501 LINE CR1 585 chrZ_NT_463753v1_random 2433 2664 CR1-X1 468 + 2433 2664 0 2 61,100, 0,131, +,+, 811511 LINE CR1 585 chrZ_NT_463754v1_random 10493 16310 GGERV10_LTR 983 + 10493 16310 0 3 218,5377,221, 0,219,5596, +,+,+, 811519 LTR ERVL 585 chrZ_NT_463754v1_random 16368 17369 GGXHOI 346 + 16368 17369 0 2 747,212, 0,789, +,+, 811520 Satellite W-chromosome 585 chrZ_NT_463758v1_random 4352 6683 GGERVL-B-int 695 - 4352 6683 0 2 506,1825, 0,506, -,-, 811535 LTR ERVL 585 chrZ_NT_463758v1_random 9513 9956 (CAGGC)n 512 + 9513 9956 0 2 241,24, 0,419, +,+, 811544 Simple_repeat Simple_repeat 585 chrZ_NT_463759v1_random 1183 1492 GGLTR7B 426 - 1183 1492 0 2 185,124, 0,185, -,-, 811547 LTR ERV1 585 chrZ_NT_463762v1_random 801 2637 GGLTR7A 774 - 801 2637 0 3 114,261,1457, 0,115,379, -,-,-, 811557 LTR ERV1 585 chrZ_NT_463763v1_random 10287 10362 (CTTG)n 344 + 10287 10362 0 2 13,11, 0,64, +,+, 811560 Simple_repeat Simple_repeat 585 chrZ_NT_463766v1_random 1733 7383 GGERV10_LTR 850 - 1733 7383 0 3 210,5230,209, 0,210,5441, -,-,-, 811576 LTR ERVL 585 chrZ_NT_463766v1_random 8309 9157 GGXHOI 328 - 8309 9157 0 2 272,522, 0,326, -,-, 811578 Satellite W-chromosome 585 chrZ_NT_463768v1_random 1773 2930 CR1-C2 631 + 1773 2930 0 2 100,82, 0,1075, +,+, 811588 LINE CR1 585 chrZ_NT_463768v1_random 3767 4298 CR1-F2 437 + 3767 4298 0 2 90,270, 0,261, +,+, 811589 LINE CR1 585 chrZ_NT_463768v1_random 5030 6280 Char12Mar1_GG 594 - 5030 6280 0 2 121,579, 0,671, -,-, 811590 DNA hAT-Charlie 585 chrZ_NT_463768v1_random 8625 9249 CR1-H 378 - 8625 9249 0 2 379,209, 0,415, -,-, 811593 LINE CR1 585 chrZ_NT_463768v1_random 11048 11669 CR1-H 372 - 11048 11669 0 2 377,209, 0,412, -,-, 811596 LINE CR1 585 chrZ_NT_463768v1_random 13545 14169 CR1-H 378 - 13545 14169 0 2 379,209, 0,415, -,-, 811599 LINE CR1 585 chrZ_NT_463769v1_random 2214 2358 G-rich 544 + 2214 2358 0 2 37,55, 0,89, +,+, 811605 Low_complexity Low_complexity 585 chrZ_NT_463769v1_random 4231 5067 GGLTR7A 571 - 4231 5067 0 2 611,147, 0,689, -,-, 811608 LTR ERV1 585 chrZ_NT_463771v1_random 7808 7959 G-rich 544 + 7808 7959 0 2 38,59, 0,92, +,+, 811614 Low_complexity Low_complexity 585 chrZ_NT_463771v1_random 11952 16403 GGLTR7A 748 - 11952 16403 0 4 111,254,1456,2626, 0,114,369,1825, -,-,-,-, 811617 LTR ERV1 585 chrZ_NT_463772v1_random 7625 14438 Z-REP 843 - 7625 14438 0 2 5454,1303, 0,5510, -,-, 811624 Satellite macro 585 chrZ_NT_463772v1_random 15409 15710 CR1-X2 444 + 15409 15710 0 2 62,227, 0,74, +,+, 811627 LINE CR1 585 chrZ_NT_463773v1_random 5919 7579 ENS1B-LTR 678 - 5919 7579 0 2 896,764, 0,896, -,-, 811632 LTR ERVL 585 chrZ_NT_463774v1_random 1499 1924 GGLTR7A 894 + 1499 1924 0 2 174,251, 0,174, +,+, 811648 LTR ERV1 585 chrZ_NT_463774v1_random 2450 3503 GGLTR7A 810 + 2450 3503 0 2 459,594, 0,459, +,+, 811650 LTR ERV1 585 chrZ_NT_463774v1_random 5846 8290 GGERVL-B-int 753 + 5846 8290 0 3 314,1243,880, 0,314,1564, +,+,+, 811654 LTR ERVL 585 chrZ_NT_463774v1_random 8869 10247 GGLTR7-int 310 + 8869 10247 0 3 105,225,280, 0,107,1098, +,+,+, 811656 LTR ERV1 585 chrZ_NT_463774v1_random 12239 16268 GGERV20_I-int 841 - 12239 16268 0 5 217,2097,72,575,905, 0,217,2334,2449,3124, -,-,-,-,-, 811658 LTR ERVL 585 chrZ_NT_463775v1_random 15044 15216 CR1-X1 414 - 15044 15216 0 2 112,60, 0,112, -,-, 811666 LINE CR1 585 chrZ_NT_463776v1_random 2600 9088 Z-REP 802 - 2600 9088 0 2 6141,301, 0,6187, -,-, 811670 Satellite macro 585 chrZ_NT_463776v1_random 10696 10980 CR1-X2 339 + 10696 10980 0 2 61,220, 0,64, +,+, 811672 LINE CR1 585 chrZ_NT_463780v1_random 821 3503 GGLTR7-int 493 + 821 3503 0 3 119,1658,832, 0,119,1850, +,+,+, 811684 LTR ERV1 585 chrZ_NT_463780v1_random 8238 8331 CR1-E 653 - 8238 8331 0 2 49,44, 0,49, -,-, 811692 LINE CR1 585 chrZ_NT_463780v1_random 10842 13966 GGLTR7-int 410 + 10842 13966 0 4 116,1663,947,277, 0,116,1853,2847, +,+,+,+, 811695 LTR ERV1 585 chrZ_NT_463781v1_random 1754 5334 GGLTR7-int 818 + 1754 5334 0 5 1310,331,1557,257,114, 0,1310,1650,3208,3466, +,+,+,+,+, 811698 LTR ERV1 585 chrZ_NT_463785v1_random 6585 12382 GGERV10_LTR 955 + 6585 12382 0 3 224,5380,192, 0,225,5605, +,+,+, 811722 LTR ERVL 585 chrZ_NT_463785v1_random 14617 15709 GGLTR7B 397 - 14617 15709 0 2 240,100, 0,992, -,-, 811723 LTR ERV1 585 chrZ_NT_463786v1_random 10636 10981 CR1-F2 398 + 10636 10981 0 2 129,216, 0,129, +,+, 811730 LINE CR1 585 chrZ_NT_463786v1_random 11036 15697 Z-REP 880 + 11036 15697 0 2 954,3696, 0,965, +,+, 811731 Satellite macro 585 chrZ_NT_463789v1_random 8888 9165 CR1-X2 390 - 8888 9165 0 2 215,62, 0,215, -,-, 811741 LINE CR1 585 chrZ_NT_463789v1_random 12101 15503 Z-REP 823 + 12101 15503 0 2 1128,2263, 0,1139, +,+, 811743 Satellite macro 585 chrZ_NT_463791v1_random 6746 7048 CR1-F2 362 - 6746 7048 0 2 243,59, 0,243, -,-, 811753 LINE CR1 585 chrZ_NT_463791v1_random 9832 10129 CR1-X2 465 + 9832 10129 0 2 62,226, 0,71, +,+, 811755 LINE CR1 585 chrZ_NT_463799v1_random 5761 12980 Z-REP 783 - 5761 12980 0 3 5291,1591,296, 0,5318,6923, -,-,-, 811782 Satellite macro 585 chrZ_NT_463799v1_random 13034 13377 CR1-F2 435 - 13034 13377 0 2 231,112, 0,231, -,-, 811784 LINE CR1 585 chrZ_NT_463804v1_random 1926 4352 GGERV10_LTR 822 - 1926 4352 0 2 38,41, 0,2385, -,-, 811801 LTR ERVL 585 chrZ_NT_463804v1_random 2093 4310 GGLTR10D-int 926 - 2093 4310 0 2 364,1850, 0,367, -,-, 811802 LTR ERVK 585 chrZ_NT_463804v1_random 4491 5346 (CGAGG)n 562 + 4491 5346 0 3 410,179,205, 0,446,650, +,+,+, 811806 Simple_repeat Simple_repeat 585 chrZ_NT_463804v1_random 12416 13285 (CGAGG)n 521 + 12416 13285 0 3 279,184,326, 0,324,543, +,+,+, 811813 Simple_repeat Simple_repeat 585 chrZ_NT_463805v1_random 4313 11115 Z-REP 834 - 4313 11115 0 2 4692,2067, 0,4735, -,-, 811822 Satellite macro 585 chrZ_NT_463806v1_random 6242 10481 GGLTR7-int 757 + 6242 10481 0 6 2445,37,465,878,258,115, 0,2445,2482,2986,3865,4124, +,+,+,+,+,+, 811832 LTR ERV1 585 chrZ_NT_463808v1_random 2232 3259 CR1-G 353 + 2232 3259 0 2 182,186, 0,841, +,+, 811841 LINE CR1 585 chrZ_NT_463808v1_random 7743 8967 GGERV20_I-int 808 - 7743 8967 0 3 62,180,504, 0,64,720, -,-,-, 811846 LTR ERVL 585 chrZ_NT_463808v1_random 7986 8466 CR1-F2 841 - 7986 8466 0 2 167,313, 0,167, -,-, 811847 LINE CR1 585 chrZ_NT_463808v1_random 8967 14758 GGERVK1-int 873 + 8967 14758 0 3 241,5257,293, 0,241,5498, +,+,+, 811848 LTR ERVK 585 chrZ_NT_463810v1_random 5395 6698 GGXHOI 351 - 5395 6698 0 2 552,733, 0,570, -,-, 811861 Satellite W-chromosome 585 chrZ_NT_463810v1_random 6797 12475 GGERV10_LTR 907 - 6797 12475 0 3 215,5253,210, 0,215,5468, -,-,-, 811862 LTR ERVL 585 chrZ_NT_463815v1_random 1094 1368 CR1-X2 398 - 1094 1368 0 2 211,63, 0,211, -,-, 811881 LINE CR1 585 chrZ_NT_463815v1_random 2129 8580 Z-REP 838 + 2129 8580 0 2 955,5440, 0,1011, +,+, 811883 Satellite macro 585 chrZ_NT_463815v1_random 12767 12906 G-rich 600 + 12767 12906 0 2 37,53, 0,86, +,+, 811887 Low_complexity Low_complexity 585 chrZ_NT_463815v1_random 13077 14477 CR1-F0 872 + 13077 14477 0 2 1220,173, 0,1227, +,+, 811888 LINE CR1 585 chrZ_NT_463816v1_random 4872 5398 GGLTR3F1 852 + 4872 5398 0 2 36,490, 0,36, +,+, 811891 LTR ERVL 585 chrZ_NT_463816v1_random 6716 9142 GGERVL-B-int 500 + 6716 9142 0 2 2048,378, 0,2048, +,+, 811896 LTR ERVL 585 chrZ_NT_463818v1_random 684 7897 Z-REP 757 + 684 7897 0 2 306,6844, 0,369, +,+, 811900 Satellite macro 585 chrZ_NT_463819v1_random 10631 11318 GGLTR3F1 668 + 10631 11318 0 2 483,201, 0,486, +,+, 811917 LTR ERVL 585 chrZ_NT_463826v1_random 6446 12038 Z-REP 845 - 6446 12038 0 2 4524,1057, 0,4535, -,-, 811949 Satellite macro 585 chrZ_NT_463829v1_random 6513 6567 (CCCTCT)n 472 + 6513 6567 0 2 7,6, 0,48, +,+, 811973 Simple_repeat Simple_repeat 585 chrZ_NT_463829v1_random 8083 10665 GGLTR7-int 424 + 8083 10665 0 5 103,138,825,554,63, 0,104,735,1654,2519, +,+,+,+,+, 811976 LTR ERV1 585 chrZ_NT_463831v1_random 8323 10776 GGLTR7-int 690 - 8323 10776 0 5 122,191,1501,327,202, 0,221,414,1924,2251, -,-,-,-,-, 811998 LTR ERV1 585 chrZ_NT_463832v1_random 4539 4690 G-rich 599 + 4539 4690 0 2 37,60, 0,91, +,+, 812006 Low_complexity Low_complexity 585 chrZ_NT_463832v1_random 8985 11379 GGLTR7-int 803 - 8985 11379 0 5 111,256,1545,332,135, 0,112,373,1927,2259, -,-,-,-,-, 812009 LTR ERV1 585 chrZ_NT_463833v1_random 362 1223 GGERVL-C-int 628 - 362 1223 0 2 124,737, 0,124, -,-, 812014 LTR ERVL 585 chrZ_NT_463833v1_random 1223 6358 GGLTR3F1 738 - 1223 6358 0 4 462,3636,556,479, 0,462,4098,4656, -,-,-,-, 812015 LTR ERVL 585 chrZ_NT_463833v1_random 6497 7665 GGLTR7B 424 + 6497 7665 0 2 234,125, 0,1043, +,+, 812016 LTR ERV1 585 chrZ_NT_463835v1_random 9846 12374 GGLTR7-int 442 - 9846 12374 0 4 277,946,564,483, 0,324,1365,2045, -,-,-,-, 812027 LTR ERV1 585 chrZ_NT_463836v1_random 6630 6924 CR1-X2 454 + 6630 6924 0 2 63,231, 0,63, +,+, 812033 LINE CR1 585 chrZ_NT_463837v1_random 11534 11683 G-rich 599 + 11534 11683 0 2 38,59, 0,90, +,+, 812043 Low_complexity Low_complexity 585 chrZ_NT_463841v1_random 2151 3850 GGLTR3F1 788 + 2151 3850 0 2 493,1205, 0,494, +,+, 812054 LTR ERVL 585 chrZ_NT_463841v1_random 3845 5249 GGLTR3F1 964 + 3845 5249 0 2 907,497, 0,907, +,+, 812055 LTR ERVL 585 chrZ_NT_463844v1_random 2324 4156 GGXHOI 397 + 2324 4156 0 3 625,416,732, 0,662,1100, +,+,+, 812074 Satellite W-chromosome 585 chrZ_NT_463844v1_random 4244 6057 GGXHOI 395 + 4244 6057 0 2 623,1154, 0,659, +,+, 812076 Satellite W-chromosome 585 chrZ_NT_463844v1_random 8610 10175 GGXHOI 382 + 8610 10175 0 3 400,737,362, 0,422,1203, +,+,+, 812083 Satellite W-chromosome 585 chrZ_NT_463846v1_random 2282 3317 GGXHOI 344 - 2282 3317 0 2 733,279, 0,756, -,-, 812092 Satellite W-chromosome 585 chrZ_NT_463846v1_random 4892 10653 GGERV10_LTR 958 - 4892 10653 0 3 220,5319,221, 0,220,5540, -,-,-, 812094 LTR ERVL 585 chrZ_NT_463846v1_random 10662 12450 GGXHOI 369 - 10662 12450 0 2 765,965, 0,823, -,-, 812095 Satellite W-chromosome 585 chrZ_NT_463847v1_random 2001 2466 Z-REP 545 + 2001 2466 0 2 136,310, 0,155, +,+, 812098 Satellite macro 585 chrZ_NT_463847v1_random 6595 6742 G-rich 520 + 6595 6742 0 2 37,56, 0,91, +,+, 812101 Low_complexity Low_complexity 585 chrZ_NT_463847v1_random 11052 11889 GGLTR7-int 725 - 11052 11889 0 3 613,75,148, 0,614,689, -,-,-, 812104 LTR ERV1 585 chrZ_NT_463850v1_random 5967 11834 GGERV10_LTR 961 - 5967 11834 0 3 219,5423,224, 0,219,5643, -,-,-, 812110 LTR ERVL 585 chrZ_NT_463858v1_random 3447 5121 GGXHOI 380 + 3447 5121 0 2 1020,612, 0,1062, +,+, 812132 Satellite W-chromosome 585 chrZ_NT_463859v1_random 7276 7424 G-rich 566 + 7276 7424 0 2 38,58, 0,90, +,+, 812137 Low_complexity Low_complexity 585 chrZ_NT_463859v1_random 11758 13122 GGLTR7-int 599 - 11758 13122 0 3 602,62,679, 0,606,685, -,-,-, 812140 LTR ERV1 585 chrZ_NT_463862v1_random 2898 6480 GGLTR7-int 818 + 2898 6480 0 5 1312,331,1556,258,114, 0,1312,1652,3209,3468, +,+,+,+,+, 812160 LTR ERV1 585 chrZ_NT_463863v1_random 7372 9885 GGLTR7-int 796 - 7372 9885 0 5 113,258,1522,336,273, 0,114,373,1904,2240, -,-,-,-,-, 812172 LTR ERV1 585 chrZ_NT_463863v1_random 11190 12983 Z-REP 664 + 11190 12983 0 2 124,908, 0,885, +,+, 812176 Satellite macro 585 chrZ_NT_463865v1_random 11133 12063 GGLTR7-int 535 - 11133 12063 0 3 608,74,247, 0,609,683, -,-,-, 812184 LTR ERV1 585 chrZ_NT_463868v1_random 7462 7612 G-rich 599 + 7462 7612 0 2 37,60, 0,90, +,+, 812192 Low_complexity Low_complexity 585 chrZ_NT_463868v1_random 9265 12614 GGLTR7A 735 - 9265 12614 0 4 131,239,1561,1407, 0,131,371,1942, -,-,-,-, 812194 LTR ERV1 585 chrZ_NT_463872v1_random 2099 5724 GGXHOI 388 - 2099 5724 0 3 758,1988,803, 0,816,2822, -,-,-, 812209 Satellite W-chromosome 585 chrZ_NT_463872v1_random 5783 11606 GGERV10_LTR 989 - 5783 11606 0 3 220,5383,219, 0,220,5604, -,-,-, 812210 LTR ERVL 585 chrZ_NT_463873v1_random 1800 3579 GGLTR7-int 568 + 1800 3579 0 2 63,75, 0,1704, +,+, 812216 LTR ERV1 585 chrZ_NT_463873v1_random 1845 3534 Z-REP 806 - 1845 3534 0 2 488,1174, 0,515, -,-, 812217 Satellite macro 585 chrZ_NT_463874v1_random 5725 12450 Z-REP 862 + 5725 12450 0 2 2018,4675, 0,2050, +,+, 812220 Satellite macro 585 chrZ_NT_463877v1_random 10878 11441 GGLTR5A 295 - 10878 11441 0 2 139,368, 0,195, -,-, 812235 LTR ERVL 585 chrZ_NT_463878v1_random 10394 10691 CR1-X2 435 - 10394 10691 0 2 234,63, 0,234, -,-, 812242 LINE CR1 585 chrZ_NT_463879v1_random 3444 3720 CR1-X2 340 - 3444 3720 0 2 211,65, 0,211, -,-, 812247 LINE CR1 585 chrZ_NT_463879v1_random 5039 6822 Z-REP 787 + 5039 6822 0 2 547,1150, 0,633, +,+, 812250 Satellite macro 585 chrZ_NT_463880v1_random 5113 5409 CR1-X2 445 - 5113 5409 0 2 240,56, 0,240, -,-, 812253 LINE CR1 585 chrZ_NT_463881v1_random 2889 7496 Z-REP 876 - 2889 7496 0 2 4460,132, 0,4475, -,-, 812258 Satellite macro 585 chrZ_NT_463881v1_random 9095 9373 CR1-X2 374 + 9095 9373 0 2 63,215, 0,63, +,+, 812260 LINE CR1 585 chrZ_NT_463882v1_random 1540 2229 CR1-E 700 - 1540 2229 0 2 161,43, 0,646, -,-, 812263 LINE CR1 585 chrZ_NT_463882v1_random 1701 2186 GGLTR3F2 656 + 1701 2186 0 2 225,198, 0,287, +,+, 812264 LTR ERVL 585 chrZ_NT_463882v1_random 2389 3496 CR1-Y 467 + 2389 3496 0 2 221,302, 0,805, +,+, 812266 LINE CR1 585 chrZ_NT_463882v1_random 2611 3194 GGLTR3C2 650 - 2611 3194 0 2 55,517, 0,66, -,-, 812267 LTR ERVL 585 chrZ_NT_463882v1_random 3852 4988 CR1-Y4 524 + 3852 4988 0 2 302,181, 0,955, +,+, 812271 LINE CR1 585 chrZ_NT_463882v1_random 4151 4816 CR1-D 667 + 4151 4816 0 2 101,564, 0,101, +,+, 812272 LINE CR1 585 chrZ_NT_463882v1_random 7168 8567 CR1-D 492 + 7168 8567 0 2 1104,295, 0,1104, +,+, 812275 LINE CR1 585 chrZ_NT_463883v1_random 6407 9541 GGLTR7-int 404 + 6407 9541 0 4 116,1639,959,273, 0,116,1855,2861, +,+,+,+, 812290 LTR ERV1 585 chrZ_NT_463887v1_random 2462 2714 CR1-X2 379 - 2462 2714 0 2 190,62, 0,190, -,-, 812316 LINE CR1 585 chrZ_NT_463887v1_random 4318 10205 Z-REP 879 + 4318 10205 0 2 4862,998, 0,4889, +,+, 812318 Satellite macro 585 chrZ_NT_463889v1_random 3009 5651 GGXHOI 357 + 3009 5651 0 2 1709,915, 0,1727, +,+, 812342 Satellite W-chromosome 585 chrZ_NT_463889v1_random 5663 11469 GGERV10_LTR 934 + 5663 11469 0 3 224,5364,217, 0,225,5589, +,+,+, 812343 LTR ERVL 585 chrZ_NT_463892v1_random 1636 4391 GGERVL18-int 786 - 1636 4391 0 2 2223,34, 0,2721, -,-, 812360 LTR ERVL 585 chrZ_NT_463892v1_random 6968 7419 GGLTR7-int 788 - 6968 7419 0 3 111,269,58, 0,111,393, -,-,-, 812364 LTR ERV1 585 chrZ_NT_463894v1_random 7665 11251 Z-REP 730 + 7665 11251 0 2 292,3280, 0,306, +,+, 812370 Satellite macro 585 chrZ_NT_463895v1_random 2200 2498 GGLTR3E1 739 + 2200 2498 0 2 178,120, 0,178, +,+, 812373 LTR ERVL 585 chrZ_NT_463896v1_random 3575 8620 GGXHOI 350 - 3575 8620 0 7 569,126,385,165,291,2939,427, 0,588,730,1155,1332,1665,4618, -,-,-,-,-,-,-, 812379 Satellite W-chromosome 585 chrZ_NT_463899v1_random 3940 6924 GGLTR7-int 393 + 3940 6924 0 4 120,1610,921,154, 0,120,1832,2830, +,+,+,+, 812386 LTR ERV1 585 chrZ_NT_463901v1_random 3187 9105 GGERV10_LTR 919 - 3187 9105 0 3 225,5471,219, 0,225,5699, -,-,-, 812401 LTR ERVL 585 chrZ_NT_463902v1_random 5987 6047 (GCTGCA)n 368 + 5987 6047 0 2 10,6, 0,54, +,+, 812411 Simple_repeat Simple_repeat 585 chrZ_NT_463903v1_random 9065 10974 GGERVK1-int 899 - 9065 10974 0 3 236,433,1239, 0,237,670, -,-,-, 812427 LTR ERVK 585 chrZ_NT_463904v1_random 5408 5751 CR1-F2 385 + 5408 5751 0 2 42,231, 0,112, +,+, 812430 LINE CR1 585 chrZ_NT_463904v1_random 5776 10936 Z-REP 873 + 5776 10936 0 2 383,4762, 0,398, +,+, 812432 Satellite macro 585 chrZ_NT_463907v1_random 4277 4812 GGERVL-B-int 662 - 4277 4812 0 2 356,52, 0,483, -,-, 812438 LTR ERVL 585 chrZ_NT_463908v1_random 8136 10859 Z-REP 808 - 8136 10859 0 2 2448,111, 0,2612, -,-, 812447 Satellite macro 585 chrZ_NT_463911v1_random 7738 7870 G-rich 660 + 7738 7870 0 2 38,41, 0,91, +,+, 812455 Low_complexity Low_complexity 585 chrZ_NT_463911v1_random 9845 10814 GGLTR7A 793 - 9845 10814 0 3 114,257,596, 0,115,373, -,-,-, 812457 LTR ERV1 585 chrZ_NT_463915v1_random 4548 6180 GGXHOI 373 - 4548 6180 0 3 271,523,803, 0,288,829, -,-,-, 812470 Satellite W-chromosome 585 chrZ_NT_463915v1_random 6239 10611 GGERV10_LTR 939 - 6239 10611 0 2 220,4152, 0,220, -,-, 812471 LTR ERVL 585 chrZ_NT_463916v1_random 2507 5883 GGLTR7-int 752 - 2507 5883 0 4 277,1440,351,1307, 0,278,1718,2069, -,-,-,-, 812474 LTR ERV1 585 chrZ_NT_463916v1_random 8940 10604 Z-REP 683 + 8940 10604 0 2 156,752, 0,912, +,+, 812478 Satellite macro 585 chrZ_NT_463918v1_random 4910 5203 CR1-X2 412 - 4910 5203 0 2 237,56, 0,237, -,-, 812484 LINE CR1 585 chrZ_NT_463919v1_random 2252 2589 CR1-F2 375 + 2252 2589 0 2 42,227, 0,110, +,+, 812488 LINE CR1 585 chrZ_NT_463919v1_random 2620 9221 Z-REP 880 + 2620 9221 0 2 871,5719, 0,882, +,+, 812490 Satellite macro 585 chrZ_NT_463920v1_random 3570 6168 GGERV28_I-int 146 - 3570 6168 0 3 1917,178,283, 0,1939,2315, -,-,-, 812493 LTR ERVK 585 chrZ_NT_463920v1_random 7771 10279 GGLTR7-int 302 - 7771 10279 0 3 278,756,1119, 0,337,1389, -,-,-, 812494 LTR ERV1 585 chrZ_NT_463922v1_random 4421 5043 CR1-H 678 + 4421 5043 0 2 477,139, 0,483, +,+, 812503 LINE CR1 585 chrZ_NT_463923v1_random 3469 10006 Z-REP 767 - 3469 10006 0 3 5653,603,257, 0,5664,6280, -,-,-, 812505 Satellite macro 585 chrZ_NT_463925v1_random 414 2098 (CAAGG)n 542 + 414 2098 0 6 179,167,318,62,216,180, 0,209,563,1201,1276,1504, +,+,+,+,+,+, 812518 Simple_repeat Simple_repeat 585 chrZ_NT_463925v1_random 2426 2857 (CAAGG)n 631 + 2426 2857 0 2 180,223, 0,208, +,+, 812522 Simple_repeat Simple_repeat 585 chrZ_NT_463925v1_random 2868 3266 (CAGGC)n 466 + 2868 3266 0 2 117,99, 0,299, +,+, 812523 Simple_repeat Simple_repeat 585 chrZ_NT_463925v1_random 3192 4847 (CAAGG)n 618 + 3192 4847 0 5 178,376,144,293,128, 0,201,753,897,1527, +,+,+,+,+, 812525 Simple_repeat Simple_repeat 585 chrZ_NT_463925v1_random 5167 5865 (CAAGG)n 557 + 5167 5865 0 3 201,219,242, 0,201,456, +,+,+, 812531 Simple_repeat Simple_repeat 585 chrZ_NT_463927v1_random 7271 7562 CR1-X2 451 - 7271 7562 0 2 228,63, 0,228, -,-, 812544 LINE CR1 585 chrZ_NT_463931v1_random 8899 8956 (TCCCCA)n 450 + 8899 8956 0 2 7,7, 0,50, +,+, 812564 Simple_repeat Simple_repeat 585 chrZ_NT_463932v1_random 2731 9803 Z-REP 795 + 2731 9803 0 2 1476,5569, 0,1503, +,+, 812569 Satellite macro 585 chrZ_NT_463935v1_random 4168 9960 GGLTR3F1 766 - 4168 9960 0 2 5307,484, 0,5308, -,-, 812602 LTR ERVL 585 chrZ_NT_463945v1_random 2045 7869 GGERV10_LTR 989 - 2045 7869 0 3 220,5384,219, 0,220,5605, -,-,-, 812636 LTR ERVL 585 chrZ_NT_463948v1_random 3639 6740 GGERV10_LTR 874 - 3639 6740 0 3 151,62,2783, 0,256,318, -,-,-, 812646 LTR ERVL 585 chrZ_NT_463948v1_random 6740 9622 GGERVK1-int 943 - 6740 9622 0 2 241,2641, 0,241, -,-, 812647 LTR ERVK 585 chrZ_NT_463955v1_random 2341 2869 GGLTR3F1 936 - 2341 2869 0 2 492,36, 0,492, -,-, 812668 LTR ERVL 585 chrZ_NT_463955v1_random 2869 8655 GGLTR3F1 895 - 2869 8655 0 2 5292,493, 0,5293, -,-, 812669 LTR ERVL 585 chrZ_NT_463964v1_random 48 2765 GGLTR10D 935 + 48 2765 0 2 346,2371, 0,346, +,+, 812687 LTR ERVK 585 chrZ_NT_463971v1_random 2511 2659 G-rich 584 + 2511 2659 0 2 38,59, 0,89, +,+, 812700 Low_complexity Low_complexity 585 chrZ_NT_463971v1_random 6616 8818 GGLTR7A 799 - 6616 8818 0 4 114,256,1441,387, 0,117,374,1815, -,-,-,-, 812703 LTR ERV1 585 chrZ_NT_463979v1_random 4140 7251 GGLTR7-int 409 + 4140 7251 0 4 116,1624,951,278, 0,116,1835,2833, +,+,+,+, 812717 LTR ERV1 585 chrZ_NT_463982v1_random 3688 6152 Z-REP 657 + 3688 6152 0 2 154,1544, 0,920, +,+, 812724 Satellite macro 585 chrZ_NT_463985v1_random 6420 8413 GGLTR7A 814 - 6420 8413 0 5 113,257,848,216,555, 0,114,374,1222,1438, -,-,-,-,-, 812735 LTR ERV1 585 chrZ_NT_463989v1_random 259 406 G-rich 496 + 259 406 0 2 39,57, 0,90, +,+, 812743 Low_complexity Low_complexity 585 chrZ_NT_463991v1_random 6044 6390 CR1-F2 404 - 6044 6390 0 2 232,114, 0,232, -,-, 812750 LINE CR1 585 chrZ_NT_463995v1_random 4753 5023 CR1-X2 461 - 4753 5023 0 2 214,56, 0,214, -,-, 812769 LINE CR1 585 chrZ_NT_464002v1_random 2025 5750 GGLTR7-int 666 - 2025 5750 0 5 112,191,1517,142,550, 0,113,304,2020,3175, -,-,-,-,-, 812782 LTR ERV1 585 chrZ_NT_464002v1_random 6564 7952 Z-REP 737 + 6564 7952 0 3 352,255,732, 0,390,656, +,+,+, 812785 Satellite macro 585 chrZ_NT_464010v1_random 6928 7074 G-rich 557 + 6928 7074 0 2 37,58, 0,88, +,+, 812807 Low_complexity Low_complexity 585 chrZ_NT_464011v1_random 6267 6562 CR1-X2 464 + 6267 6562 0 2 63,232, 0,63, +,+, 812811 LINE CR1 585 chrZ_NT_464012v1_random 5706 7600 Z-REP 857 - 5706 7600 0 2 1107,541, 0,1353, -,-, 812816 Satellite macro 585 chrZ_NT_464013v1_random 2125 6573 Z-REP 848 + 2125 6573 0 2 854,3583, 0,865, +,+, 812820 Satellite macro 585 chrZ_NT_464021v1_random 4646 4982 CR1-F2 419 - 4646 4982 0 2 200,122, 0,214, -,-, 812845 LINE CR1 585 chrZ_NT_464021v1_random 6804 7101 CR1-X2 459 + 6804 7101 0 2 63,234, 0,63, +,+, 812848 LINE CR1 585 chrZ_NT_464027v1_random 5647 5924 CR1-X2 395 + 5647 5924 0 2 63,214, 0,63, +,+, 812858 LINE CR1 585 chrZ_NT_464031v1_random 3828 4356 GGLTR3F1 932 + 3828 4356 0 2 36,492, 0,36, +,+, 812866 LTR ERVL 585 chrZ_NT_464031v1_random 4381 5767 GGXHOI 412 - 4381 5767 0 5 333,178,428,184,147, 0,347,557,1021,1239, -,-,-,-,-, 812867 Satellite W-chromosome 585 chrZ_NT_464032v1_random 3927 4428 GGLTR3F2 572 + 3927 4428 0 2 222,223, 0,278, +,+, 812875 LTR ERVL 585 chrZ_NT_464032v1_random 4728 6573 GGERVK1-int 917 - 4728 6573 0 3 238,438,1169, 0,238,676, -,-,-, 812878 LTR ERVK 585 chrZ_NT_464036v1_random 569 824 (CAGG)n 523 + 569 824 0 2 214,29, 0,226, +,+, 812887 Simple_repeat Simple_repeat 585 chrZ_NT_464038v1_random 296 411 (T)n 761 + 296 411 0 2 27,50, 0,65, +,+, 812904 Simple_repeat Simple_repeat 585 chrZ_NT_464041v1_random 429 3291 Z-REP 861 + 429 3291 0 2 928,1923, 0,939, +,+, 812914 Satellite macro 585 chrZ_NT_464044v1_random 911 1133 CR1-X1 467 + 911 1133 0 2 61,119, 0,103, +,+, 812922 LINE CR1 585 chrZ_NT_464052v1_random 412 5749 GGERVK1-int 934 + 412 5749 0 2 241,5096, 0,241, +,+, 812938 LTR ERVK 585 chrZ_NT_464053v1_random 1458 1606 G-rich 560 + 1458 1606 0 2 36,59, 0,89, +,+, 812940 Low_complexity Low_complexity 585 chrZ_NT_464053v1_random 3482 5727 GGLTR7-int 663 - 3482 5727 0 3 558,1422,264, 0,559,1981, -,-,-, 812942 LTR ERV1 585 chrZ_NT_464060v1_random 3195 4031 GGLTR7-int 668 + 3195 4031 0 3 148,74,613, 0,148,223, +,+,+, 812955 LTR ERV1 585 chrZ_NT_464061v1_random 1061 5230 GGERV20_I-int 799 + 1061 5230 0 6 214,400,2596,236,407,192, 0,215,731,3327,3570,3977, +,+,+,+,+,+, 812957 LTR ERVL