Experiment description: Juicer version 1.5.6;2 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 2 -d /mnt/storage/home/manuriddinov/scratch/fastq/mm10/16_05_21/S7 -n S7 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/mm10/16_05_21/S7 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                             
Sequenced Read Pairs:  82,358
 Normal Paired: 63,266 (76.82%)
 Chimeric Paired: 7,336 (8.91%)
 Chimeric Ambiguous: 3,231 (3.92%)
 Unmapped: 8,525 (10.35%)
 Ligation Motif Present: 811 (0.98%)
Alignable (Normal+Chimeric Paired): 70,602 (85.73%)
Unique Reads: 70,392 (85.47%)
PCR Duplicates: 116 (0.14%)
Optical Duplicates: 94 (0.11%)
Library Complexity Estimate: 21,404,844
Intra-fragment Reads: 6,340 (7.70% / 9.01%)
Below MAPQ Threshold: 15,688 (19.05% / 22.29%)
Hi-C Contacts: 48,364 (58.72% / 68.71%)
 Ligation Motif Present: 487  (0.59% / 0.69%)
 3' Bias (Long Range): 72% - 28%
 Pair Type %(L-I-O-R): 24% - 26% - 25% - 25%
Inter-chromosomal: 16,063  (19.50% / 22.82%)
Intra-chromosomal: 32,301  (39.22% / 45.89%)
Short Range (<20Kb): 16,963  (20.60% / 24.10%)
Long Range (>20Kb): 15,338  (18.62% / 21.79%)