Experiment description: Juicer version 1.5.6;2 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 2 -d /mnt/storage/home/manuriddinov/scratch/fastq/mm10/16_05_21/S7 -n S7 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/mm10/16_05_21/S7 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                             
Sequenced Read Pairs:  82,358
 Normal Paired: 63,266 (76.82%)
 Chimeric Paired: 7,336 (8.91%)
 Chimeric Ambiguous: 3,231 (3.92%)
 Unmapped: 8,525 (10.35%)
 Ligation Motif Present: 811 (0.98%)
Alignable (Normal+Chimeric Paired): 70,602 (85.73%)
Unique Reads: 70,392 (85.47%)
PCR Duplicates: 116 (0.14%)
Optical Duplicates: 94 (0.11%)
Library Complexity Estimate: 21,404,844
Intra-fragment Reads: 6,340 (7.70% / 9.01%)
Below MAPQ Threshold: 20,631 (25.05% / 29.31%)
Hi-C Contacts: 43,421 (52.72% / 61.68%)
 Ligation Motif Present: 447  (0.54% / 0.64%)
 3' Bias (Long Range): 73% - 27%
 Pair Type %(L-I-O-R): 24% - 26% - 25% - 25%
Inter-chromosomal: 13,724  (16.66% / 19.50%)
Intra-chromosomal: 29,697  (36.06% / 42.19%)
Short Range (<20Kb): 15,849  (19.24% / 22.52%)
Long Range (>20Kb): 13,848  (16.81% / 19.67%)