Experiment description: Juicer version 1.5.6;2 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 2 -d /mnt/storage/home/manuriddinov/scratch/fastq/mm10/16_05_21/S14 -n S14 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/mm10/16_05_21/S14 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                          
Sequenced Read Pairs:  31,265
 Normal Paired: 23,256 (74.38%)
 Chimeric Paired: 1,762 (5.64%)
 Chimeric Ambiguous: 797 (2.55%)
 Unmapped: 5,450 (17.43%)
 Ligation Motif Present: 207 (0.66%)
Alignable (Normal+Chimeric Paired): 25,018 (80.02%)
Unique Reads: 24,962 (79.84%)
PCR Duplicates: 30 (0.10%)
Optical Duplicates: 26 (0.08%)
Library Complexity Estimate: 10,401,668
Intra-fragment Reads: 6,706 (21.45% / 26.86%)
Below MAPQ Threshold: 4,621 (14.78% / 18.51%)
Hi-C Contacts: 13,635 (43.61% / 54.62%)
 Ligation Motif Present: 133  (0.43% / 0.53%)
 3' Bias (Long Range): 68% - 32%
 Pair Type %(L-I-O-R): 26% - 25% - 25% - 24%
Inter-chromosomal: 5,436  (17.39% / 21.78%)
Intra-chromosomal: 8,199  (26.22% / 32.85%)
Short Range (<20Kb): 4,681  (14.97% / 18.75%)
Long Range (>20Kb): 3,518  (11.25% / 14.09%)