Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -n Fibs_dKO-1 -d /mnt/storage/home/manuriddinov/scratch/fastq/cHi-C/CapF/CapF-3 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/CapF-3 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                              
Sequenced Read Pairs:  55,960,720
 Normal Paired: 33,564,482 (59.98%)
 Chimeric Paired: 16,520,142 (29.52%)
 Chimeric Ambiguous: 5,211,026 (9.31%)
 Unmapped: 665,070 (1.19%)
 Ligation Motif Present: 46,826,145 (83.68%)
Alignable (Normal+Chimeric Paired): 50,084,624 (89.50%)
Unique Reads: 32,706,948 (58.45%)
PCR Duplicates: 3,491,167 (6.24%)
Optical Duplicates: 13,886,509 (24.81%)
Library Complexity Estimate: 175,389,158
Intra-fragment Reads: 1,755,926 (3.14% / 5.37%)
Below MAPQ Threshold: 4,751,744 (8.49% / 14.53%)
Hi-C Contacts: 26,199,278 (46.82% / 80.10%)
 Ligation Motif Present: 18,805,676  (33.61% / 57.50%)
 3' Bias (Long Range): 78% - 22%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 5,078,497  (9.08% / 15.53%)
Intra-chromosomal: 21,120,781  (37.74% / 64.58%)
Short Range (<20Kb): 14,191,280  (25.36% / 43.39%)
Long Range (>20Kb): 6,929,439  (12.38% / 21.19%)