Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -n Fibs_WT-2 -d /mnt/storage/home/manuriddinov/scratch/fastq/cHi-C/CapF/CapF-2 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/CapF-2 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  45,854,642
 Normal Paired: 22,377,281 (48.80%)
 Chimeric Paired: 17,735,419 (38.68%)
 Chimeric Ambiguous: 5,251,313 (11.45%)
 Unmapped: 490,629 (1.07%)
 Ligation Motif Present: 30,860,280 (67.30%)
Alignable (Normal+Chimeric Paired): 40,112,700 (87.48%)
Unique Reads: 29,010,344 (63.27%)
PCR Duplicates: 1,031,068 (2.25%)
Optical Duplicates: 10,071,288 (21.96%)
Library Complexity Estimate: 427,574,259
Intra-fragment Reads: 2,469,364 (5.39% / 8.51%)
Below MAPQ Threshold: 4,472,754 (9.75% / 15.42%)
Hi-C Contacts: 22,068,226 (48.13% / 76.07%)
 Ligation Motif Present: 11,671,478  (25.45% / 40.23%)
 3' Bias (Long Range): 79% - 21%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 6,886,550  (15.02% / 23.74%)
Intra-chromosomal: 15,181,676  (33.11% / 52.33%)
Short Range (<20Kb): 8,221,095  (17.93% / 28.34%)
Long Range (>20Kb): 6,960,563  (15.18% / 23.99%)