Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g hg38 -z /Data/DataBases/hg38/hg38_canonic.fa -p /Data/DataBases/hg38/hg38_canonic.chrom.sizes -s DpnII -y /Data/UserData/FairWind/Ya.Cloud/core/pipeline/data/restriction_sites/RestrictionSites_DpnII_hg38.txt -d /Data/NGS_Data/20211027_Maria_NGS_data_run139/Result/scK562_1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
Sequenced Read Pairs:  63,895
 Normal Paired: 24,513 (38.36%)
 Chimeric Paired: 7,962 (12.46%)
 Chimeric Ambiguous: 11,702 (18.31%)
 Unmapped: 19,718 (30.86%)
 Ligation Motif Present: 18,676 (29.23%)
Alignable (Normal+Chimeric Paired): 32,475 (50.83%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-11-09T18:23:37,307]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 15,054 (23.56%)
PCR Duplicates: 17,413 (27.25%)
Optical Duplicates: 8 (0.01%)
Library Complexity Estimate: 18,034
Intra-fragment Reads: 988 (1.55% / 6.56%)
Below MAPQ Threshold: 6,987 (10.94% / 46.41%)
Hi-C Contacts: 7,079 (11.08% / 47.02%)
 Ligation Motif Present: 3,816  (5.97% / 25.35%)
 3' Bias (Long Range): 52% - 48%
 Pair Type %(L-I-O-R): 24% - 25% - 25% - 25%
Inter-chromosomal: 2,422  (3.79% / 16.09%)
Intra-chromosomal: 4,657  (7.29% / 30.94%)
Short Range (<20Kb): 3,333  (5.22% / 22.14%)
Long Range (>20Kb): 1,324  (2.07% / 8.80%)