Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g hg38 -z /Data/DataBases/hg38/hg38_canonic.fa -p /Data/DataBases/hg38/hg38_canonic.chrom.sizes -s DpnII -y /Data/UserData/FairWind/Ya.Cloud/core/pipeline/data/restriction_sites/RestrictionSites_DpnII_hg38.txt -d /Data/NGS_Data/20211027_Maria_NGS_data_run139/Result/scK562_3                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
Sequenced Read Pairs:  47,767
 Normal Paired: 18,353 (38.42%)
 Chimeric Paired: 5,804 (12.15%)
 Chimeric Ambiguous: 10,900 (22.82%)
 Unmapped: 12,710 (26.61%)
 Ligation Motif Present: 14,223 (29.78%)
Alignable (Normal+Chimeric Paired): 24,157 (50.57%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-11-09T18:26:56,840]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 12,172 (25.48%)
PCR Duplicates: 11,976 (25.07%)
Optical Duplicates: 9 (0.02%)
Library Complexity Estimate: 15,361
Intra-fragment Reads: 755 (1.58% / 6.20%)
Below MAPQ Threshold: 6,059 (12.68% / 49.78%)
Hi-C Contacts: 5,358 (11.22% / 44.02%)
 Ligation Motif Present: 2,660  (5.57% / 21.85%)
 3' Bias (Long Range): 51% - 49%
 Pair Type %(L-I-O-R): 24% - 27% - 23% - 26%
Inter-chromosomal: 2,607  (5.46% / 21.42%)
Intra-chromosomal: 2,751  (5.76% / 22.60%)
Short Range (<20Kb): 1,875  (3.93% / 15.40%)
Long Range (>20Kb): 876  (1.83% / 7.20%)