Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 14 threads; openjdk version "17.0.12" 2024-07-16; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g T2T -d /storage3/nyt/Projects/Juicer-Out/2024-07-26-BGI/Embryo/Kur3_K -s DpnII -y /storage2/nyt/Data/Genomes/T2T-CHM13v2.0/juicer.rs/T2T-CHM13v2.0_DpnII.txt -p /storage2/nyt/Data/Genomes/T2T-CHM13v2.0/hgT2T.chromsizes -z /storage2/nyt/Data/Genomes/T2T-CHM13v2.0/hgT2T.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 14                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
Sequenced Read Pairs:  73,954
 Normal Paired: 1,409 (1.91%)
 Chimeric Paired: 12 (0.02%)
 Chimeric Ambiguous: 17 (0.02%)
 Unmapped: 72,516 (98.06%)
 Ligation Motif Present: 196 (0.27%)
Alignable (Normal+Chimeric Paired): 1,421 (1.92%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2024-08-06T15:01:52,343]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 1,380 (1.87%)
PCR Duplicates: 0 (0.00%)
Optical Duplicates: 41 (0.06%)
Library Complexity Estimate: 0
Intra-fragment Reads: 220 (0.30% / 15.94%)
Below MAPQ Threshold: 1,061 (1.43% / 76.88%)
Hi-C Contacts: 319 (0.43% / 23.12%)
 Ligation Motif Present: 12  (0.02% / 0.87%)
 3' Bias (Long Range): 44% - 56%
 Pair Type intra chrom %(L-I-O-R): 0% - 99% - 0% - 0%
 Pair Type inter chrom %(L-I-O-R): 39% - 9% - 30% - 22%
 DE: 92%
 Cis/all (FF and RR orient): 6.7%
Inter-chromosomal: 23  (0.03% / 1.67%)
Intra-chromosomal: 296  (0.40% / 21.45%)
Short Range (<20,000bp): 294  (0.40% / 21.30%)
Long Range (>20,000bp): 2  (0.00% / 0.14%)