Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.13" 2021-10-19; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g hg19 -z /Data/DataBases/hg19_Canonic/hg19.fa -p /Data/DataBases/hg19_Canonic/hg19.chrom.sizes -s DpnII -y /Data/DataBases/hg19_Canonic/hg19_DpnII_RS.txt -d /Data/NGS_Data/20220113_Maria_NGS_data_2021_12_27/Results/P47-3                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  22,048
 Normal Paired: 9,336 (42.34%)
 Chimeric Paired: 9,265 (42.02%)
 Chimeric Ambiguous: 1,689 (7.66%)
 Unmapped: 1,758 (7.97%)
 Ligation Motif Present: 16,181 (73.39%)
Alignable (Normal+Chimeric Paired): 18,601 (84.37%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-01-18T14:23:25,777]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 17,968 (81.49%)
PCR Duplicates: 479 (2.17%)
Optical Duplicates: 154 (0.70%)
Library Complexity Estimate: 349,034
Intra-fragment Reads: 967 (4.39% / 5.38%)
Below MAPQ Threshold: 2,895 (13.13% / 16.11%)
Hi-C Contacts: 14,106 (63.98% / 78.51%)
 Ligation Motif Present: 11,827  (53.64% / 65.82%)
 3' Bias (Long Range): 74% - 26%
 Pair Type %(L-I-O-R): 26% - 25% - 25% - 24%
Inter-chromosomal: 2,502  (11.35% / 13.92%)
Intra-chromosomal: 11,604  (52.63% / 64.58%)
Short Range (<20Kb): 7,068  (32.06% / 39.34%)
Long Range (>20Kb): 4,536  (20.57% / 25.24%)