Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.13" 2021-10-19; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g hg19 -z /Data/DataBases/hg19_Canonic/hg19.fa -p /Data/DataBases/hg19_Canonic/hg19.chrom.sizes -s DpnII -y /Data/DataBases/hg19_Canonic/hg19_DpnII_RS.txt -d /Data/NGS_Data/20220113_Maria_NGS_data_2021_12_27/Results/P47-4                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  41,227
 Normal Paired: 16,440 (39.88%)
 Chimeric Paired: 15,547 (37.71%)
 Chimeric Ambiguous: 2,468 (5.99%)
 Unmapped: 6,772 (16.43%)
 Ligation Motif Present: 26,020 (63.11%)
Alignable (Normal+Chimeric Paired): 31,987 (77.59%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-01-18T14:25:57,970]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 30,631 (74.30%)
PCR Duplicates: 1,065 (2.58%)
Optical Duplicates: 291 (0.71%)
Library Complexity Estimate: 461,034
Intra-fragment Reads: 2,421 (5.87% / 7.90%)
Below MAPQ Threshold: 2,538 (6.16% / 8.29%)
Hi-C Contacts: 25,672 (62.27% / 83.81%)
 Ligation Motif Present: 20,977  (50.88% / 68.48%)
 3' Bias (Long Range): 77% - 23%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 5,231  (12.69% / 17.08%)
Intra-chromosomal: 20,441  (49.58% / 66.73%)
Short Range (<20Kb): 11,510  (27.92% / 37.58%)
Long Range (>20Kb): 8,931  (21.66% / 29.16%)