2943652 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 secondary 0 + 0 supplementary 0 + 0 duplicates 296609 + 0 mapped (10.08% : N/A) 2943652 + 0 paired in sequencing 1471826 + 0 read1 1471826 + 0 read2 236526 + 0 properly paired (8.04% : N/A) 282814 + 0 with itself and mate mapped 13795 + 0 singletons (0.47% : N/A) 5850 + 0 with mate mapped to a different chr 5253 + 0 with mate mapped to a different chr (mapQ>=5)