Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O17 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O17 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  7,619,124
 Normal Paired: 6,745,321 (88.53%)
 Chimeric Paired: 330,894 (4.34%)
 Chimeric Ambiguous: 64,525 (0.85%)
 Unmapped: 478,384 (6.28%)
 Ligation Motif Present: 3,517,153 (46.16%)
Alignable (Normal+Chimeric Paired): 7,076,215 (92.87%)
Unique Reads: 6,378,591 (83.72%)
PCR Duplicates: 697,624 (9.16%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 33,488,436
Intra-fragment Reads: 3,364,030 (44.15% / 52.74%)
Below MAPQ Threshold: 96,364 (1.26% / 1.51%)
Hi-C Contacts: 2,918,197 (38.30% / 45.75%)
 Ligation Motif Present: 2,601,451  (34.14% / 40.78%)
 3' Bias (Long Range): 71% - 29%
 Pair Type %(L-I-O-R): 25% - 26% - 25% - 24%
Inter-chromosomal: 10,453  (0.14% / 0.16%)
Intra-chromosomal: 2,907,744  (38.16% / 45.59%)
Short Range (<20Kb): 2,853,972  (37.46% / 44.74%)
Long Range (>20Kb): 53,772  (0.71% / 0.84%)