Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O18 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O18 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  16,284,851
 Normal Paired: 15,381,859 (94.46%)
 Chimeric Paired: 386,327 (2.37%)
 Chimeric Ambiguous: 89,182 (0.55%)
 Unmapped: 427,483 (2.63%)
 Ligation Motif Present: 7,393,995 (45.40%)
Alignable (Normal+Chimeric Paired): 15,768,186 (96.83%)
Unique Reads: 14,482,191 (88.93%)
PCR Duplicates: 1,285,995 (7.90%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 91,339,757
Intra-fragment Reads: 7,830,009 (48.08% / 54.07%)
Below MAPQ Threshold: 215,460 (1.32% / 1.49%)
Hi-C Contacts: 6,436,722 (39.53% / 44.45%)
 Ligation Motif Present: 5,798,914  (35.61% / 40.04%)
 3' Bias (Long Range): 72% - 28%
 Pair Type %(L-I-O-R): 23% - 20% - 34% - 23%
Inter-chromosomal: 21,577  (0.13% / 0.15%)
Intra-chromosomal: 6,415,145  (39.39% / 44.30%)
Short Range (<20Kb): 6,369,043  (39.11% / 43.98%)
Long Range (>20Kb): 46,102  (0.28% / 0.32%)