Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O19 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O19 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  14,250,730
 Normal Paired: 11,275,573 (79.12%)
 Chimeric Paired: 307,728 (2.16%)
 Chimeric Ambiguous: 64,390 (0.45%)
 Unmapped: 2,603,039 (18.27%)
 Ligation Motif Present: 6,387,931 (44.83%)
Alignable (Normal+Chimeric Paired): 11,583,301 (81.28%)
Unique Reads: 10,371,960 (72.78%)
PCR Duplicates: 1,211,341 (8.50%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 51,449,519
Intra-fragment Reads: 5,491,743 (38.54% / 52.95%)
Below MAPQ Threshold: 131,104 (0.92% / 1.26%)
Hi-C Contacts: 4,749,113 (33.33% / 45.79%)
 Ligation Motif Present: 4,202,188  (29.49% / 40.51%)
 3' Bias (Long Range): 71% - 29%
 Pair Type %(L-I-O-R): 26% - 17% - 34% - 22%
Inter-chromosomal: 16,614  (0.12% / 0.16%)
Intra-chromosomal: 4,732,499  (33.21% / 45.63%)
Short Range (<20Kb): 4,710,844  (33.06% / 45.42%)
Long Range (>20Kb): 21,655  (0.15% / 0.21%)