Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O24 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O24 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  13,415,257
 Normal Paired: 11,148,940 (83.11%)
 Chimeric Paired: 433,694 (3.23%)
 Chimeric Ambiguous: 94,912 (0.71%)
 Unmapped: 1,737,711 (12.95%)
 Ligation Motif Present: 5,931,212 (44.21%)
Alignable (Normal+Chimeric Paired): 11,582,634 (86.34%)
Unique Reads: 10,267,792 (76.54%)
PCR Duplicates: 1,314,842 (9.80%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 47,077,839
Intra-fragment Reads: 5,535,407 (41.26% / 53.91%)
Below MAPQ Threshold: 138,076 (1.03% / 1.34%)
Hi-C Contacts: 4,594,309 (34.25% / 44.74%)
 Ligation Motif Present: 4,114,056  (30.67% / 40.07%)
 3' Bias (Long Range): 71% - 29%
 Pair Type %(L-I-O-R): 25% - 24% - 25% - 26%
Inter-chromosomal: 26,799  (0.20% / 0.26%)
Intra-chromosomal: 4,567,510  (34.05% / 44.48%)
Short Range (<20Kb): 4,427,665  (33.00% / 43.12%)
Long Range (>20Kb): 139,844  (1.04% / 1.36%)