Experiment description: O124
Sequenced Read Pairs:  5,563,183
 Normal Paired: 843,893 (15.17%)
 Chimeric Paired: 607,534 (10.92%)
 Chimeric Ambiguous: 228,104 (4.10%)
 Unmapped: 3,883,652 (69.81%)
 Ligation Motif Present: 1,892,044 (34.01%)
Alignable (Normal+Chimeric Paired): 1,451,427 (26.09%)
Unique Reads: 599,094 (10.77%)
PCR Duplicates: 307,106 (5.52%)
Optical Duplicates: 545,227 (9.80%)
Library Complexity Estimate: 1,013,848
Intra-fragment Reads: 44,541 (0.80% / 7.43%)
Below MAPQ Threshold: 38,741 (0.70% / 6.47%)
Hi-C Contacts: 515,812 (9.27% / 86.10%)
 Ligation Motif Present: 260,390  (4.68% / 43.46%)
 3' Bias (Long Range): 74% - 26%
 Pair Type intra chrom %(L-I-O-R): 16% - 51% - 16% - 16%
 Pair Type inter chrom %(L-I-O-R): 23% - 27% - 25% - 25%
 DE: 34%
 Cis/all (FF and RR orient): 99.8%
Inter-chromosomal: 734  (0.01% / 0.12%)
Intra-chromosomal: 515,078  (9.26% / 85.98%)
Short Range (<20,000bp): 319,314  (5.74% / 53.30%)
Long Range (>20,000bp): 195,764  (3.52% / 32.68%)